Citrus Sinensis ID: 013006
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 451 | 2.2.26 [Sep-21-2011] | |||||||
| P24640 | 315 | Lipase 3 OS=Moraxella sp. | N/A | no | 0.514 | 0.736 | 0.216 | 2e-06 | |
| Q8TB40 | 342 | Abhydrolase domain-contai | yes | no | 0.534 | 0.704 | 0.240 | 5e-06 | |
| Q8VD66 | 342 | Abhydrolase domain-contai | yes | no | 0.532 | 0.701 | 0.239 | 3e-05 | |
| Q02104 | 317 | Lipase 1 OS=Psychrobacter | N/A | no | 0.481 | 0.684 | 0.191 | 5e-05 | |
| Q5EA59 | 342 | Abhydrolase domain-contai | yes | no | 0.518 | 0.684 | 0.237 | 0.0001 | |
| A4VQH7 | 265 | Putative aminoacrylate hy | yes | no | 0.263 | 0.449 | 0.274 | 0.0006 | |
| Q476M7 | 289 | 2-hydroxy-6-oxononadiened | yes | no | 0.365 | 0.570 | 0.252 | 0.0006 |
| >sp|P24640|LIP3_MORS1 Lipase 3 OS=Moraxella sp. (strain TA144) GN=lip3 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 116/296 (39%), Gaps = 64/296 (21%)
Query: 152 AGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKE 211
A +NV P+L + GFG ++ + A G + +PD
Sbjct: 60 AENDNVTGEPLLLIHGFGGNKDNFTR-----------IADKLEGYHLIIPD--------- 99
Query: 212 GDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIK-EVIREPVYVVGNSLGGFVA 270
L GFG+ ++P ++ Y D ++ ++ + + +V GNS+GG ++
Sbjct: 100 ---------LLGFGNSSKPMTAD--YRADAQATRLHELMQAKGLASNTHVGGNSMGGAIS 148
Query: 271 VYFAACNPHLVKGVTLLNATPFWGFS-PNPIRSPKLARILPWSGTFPLPASVR----KLI 325
V +AA P +K + L++ FW P + L PL + + K+
Sbjct: 149 VAYAAKYPKEIKSLWLVDTAGFWSAGVPKSLEGATLEN-------NPLLINSKEDFYKMY 201
Query: 326 EFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLS 385
+F+ K P I + +K V+A N + T+ILE N+
Sbjct: 202 DFVMYK---PPYIPKSVKAVFAQERINNKALDTKILEQI---------------VTDNVE 243
Query: 386 FREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDE 441
R + +P +++G +D +KP +K +P+A ++ GH P E
Sbjct: 244 ERAKI--IAKYNIPTLVVWGDKDQVIKPETTELIKEIIPQAQVIMMNDVGHVPMVE 297
|
Moraxella sp. (strain TA144) (taxid: 77152) EC: 3EC: .EC: 1EC: .EC: 1EC: .EC: 3 |
| >sp|Q8TB40|ABHD4_HUMAN Abhydrolase domain-containing protein 4 OS=Homo sapiens GN=ABHD4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 126/316 (39%), Gaps = 75/316 (23%)
Query: 155 ENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDS 214
E + P++ + GFG G + + L D LG G S PR EG
Sbjct: 64 EQNDRTPLVMVHGFGGGVGLWILNMDSLSARRTLHTFDLLGFGRS--SRPAFPRDPEGAE 121
Query: 215 TEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFA 274
E S++ W++ + I +I ++G+SLGGF+A ++
Sbjct: 122 ------------------DEFVTSIETWRETMG--IPSMI-----LLGHSLGGFLATSYS 156
Query: 275 ACNPHLVKGVTLLNATPFWGF-----SPNPIRSPKLARILPWSGTFPLPASVRKLIEFIW 329
P VK + L++ WGF +P+ IR+P PA V+ + +
Sbjct: 157 IKYPDRVKHLILVDP---WGFPLRPTNPSEIRAP--------------PAWVKAVASVLG 199
Query: 330 QKISDPESIAEV---------------LKQVYADHATNVDTVFTRILE-TTQHPAAAASF 373
+ S+P ++ V K+ +AD + DT+ I Q+P+ +F
Sbjct: 200 R--SNPLAVLRVAGPWGPGLVQRFRPDFKRKFADFFED-DTISEYIYHCNAQNPSGETAF 256
Query: 374 ASIMFAPQGNLSFREALSRCQM--NGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPY--Y 429
++M + R L R + VPI +IYG D W+ G +VK Q P++
Sbjct: 257 KAMM--ESFGWARRPMLERIHLIRKDVPITMIYG-SDTWIDTSTGKKVKMQRPDSYVRDM 313
Query: 430 EISPAGHCPHDEVPEV 445
EI A H + + P +
Sbjct: 314 EIKGASHHVYADQPHI 329
|
Lysophospholipase selective for N-acyl phosphatidylethanolamine (NAPE). Contributes to the biosynthesis of N-acyl ethanolamines, including the endocannabinoid anandamide by hydrolyzing the sn-1 and sn-2 acyl chains from N-acyl phosphatidylethanolamine (NAPE) generating glycerophospho-N-acyl ethanolamine (GP-NAE), an intermediate for N-acyl ethanolamine biosynthesis. Hydrolyzes substrates bearing saturated, monounsaturated, polyunsaturated N-acyl chains. Shows no significant activity towards other lysophospholipids, including lysophosphatidylcholine, lysophosphatidylethanolamine and lysophosphatidylserine. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q8VD66|ABHD4_MOUSE Abhydrolase domain-containing protein 4 OS=Mus musculus GN=Abhd4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 126/317 (39%), Gaps = 77/317 (24%)
Query: 155 ENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPT-PRSKEGD 213
E + P++ + GFG G + + L D LG G S PT PR EG
Sbjct: 64 EQKDRTPLVMVHGFGGGVGLWILNMDSLSARRTLHTFDLLGFGRS---SRPTFPRDPEGA 120
Query: 214 STEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYF 273
E S++ W++ + I +I ++G+SLGGF+A +
Sbjct: 121 E------------------DEFVASIETWRETMG--IPTMI-----LLGHSLGGFLATSY 155
Query: 274 AACNPHLVKGVTLLNATPFWGF-----SPNPIRSPKLARILPWSGTFPLPASVRKLIEFI 328
+ P VK + L++ WGF P+ IR+P P V+ + +
Sbjct: 156 SIKYPERVKHLILVDP---WGFPLRPTDPSEIRAP--------------PTWVKAVASVL 198
Query: 329 WQKISDPESIAEV---------------LKQVYADHATNVDTVFTRILE-TTQHPAAAAS 372
+ S+P ++ V K+ +AD + DT+ I Q+P+ +
Sbjct: 199 GR--SNPLAVLRVAGPWGPGLVQRFRPDFKRKFADFFED-DTISEYIYHCNAQNPSGETA 255
Query: 373 FASIMFAPQGNLSFREALSRCQM--NGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPY-- 428
F ++M + R L R + VPI +IYG + W+ G +VK Q P++
Sbjct: 256 FKAMM--ESFGWARRPMLERIHLIRKDVPITMIYGA-NTWIDTSTGKKVKMQRPDSYVRD 312
Query: 429 YEISPAGHCPHDEVPEV 445
EI A H + + P +
Sbjct: 313 MEIEGASHHVYADQPHI 329
|
Lysophospholipase selective for N-acyl phosphatidylethanolamine (NAPE). Contributes to the biosynthesis of N-acyl ethanolamines, including the endocannabinoid anandamide by hydrolyzing the sn-1 and sn-2 acyl chains from N-acyl phosphatidylethanolamine (NAPE) generating glycerophospho-N-acyl ethanolamine (GP-NAE), an intermediate for N-acyl ethanolamine biosynthesis. Hydrolyzes substrates bearing saturated, monounsaturated, polyunsaturated N-acyl chains. Shows no significant activity towards other lysophospholipids, including lysophosphatidylcholine, lysophosphatidylethanolamine and lysophosphatidylserine. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q02104|LIP1_PSYIM Lipase 1 OS=Psychrobacter immobilis GN=lip1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/303 (19%), Positives = 118/303 (38%), Gaps = 86/303 (28%)
Query: 156 NVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDST 215
NV P+L + GFG ++ + + L G + +PD
Sbjct: 64 NVAGEPLLLIHGFGGNKDNFTRIARQLE-----------GYHLIIPD------------- 99
Query: 216 EEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIK-EVIREPVYVVGNSLGGFVAVYFA 274
L GFG+ ++P +++ Y + + ++ ++ + + ++V GNS+GG ++V +A
Sbjct: 100 -----LLGFGESSKPMSAD--YRSEAQRTRLHELLQAKGLASNIHVGGNSMGGAISVAYA 152
Query: 275 ACNPHLVKGVTLLNATPFWG-----------FSPNPI---RSPKLARILPWSGTFP--LP 318
A P VK + L+++ FW NP+ + ++ + P LP
Sbjct: 153 AKYPKDVKSLWLVDSAGFWSAGIPKSLEGATLENNPLLIKSNEDFYKMYDFVMYKPPYLP 212
Query: 319 ASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMF 378
SV+ + F ++I + E A++L+Q+ D+ + +
Sbjct: 213 KSVKAV--FAQERIKNKELDAKILEQIVTDNVEERAKIIAQY------------------ 252
Query: 379 APQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCP 438
+P +++G +D +KP +K+ +P+A + GH P
Sbjct: 253 ------------------KIPTLVVWGDKDQIIKPETVNLIKKIIPQAQVIMMEDVGHVP 294
Query: 439 HDE 441
E
Sbjct: 295 MVE 297
|
Psychrobacter immobilis (taxid: 498) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q5EA59|ABHD4_BOVIN Abhydrolase domain-containing protein 4 OS=Bos taurus GN=ABHD4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 124/311 (39%), Gaps = 77/311 (24%)
Query: 161 PVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPT-PRSKEGDSTEEKN 219
P++ + GFG G + + L D LG G S PT PR EG
Sbjct: 70 PLVMVHGFGGGVGLWILNMDSLSTRRTLHTFDLLGFGRS---SRPTFPRDPEGAE----- 121
Query: 220 FLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPH 279
E S++ W++ + I +I ++G+SLGGF+A ++ P
Sbjct: 122 -------------DEFVTSIETWRESMG--IPSMI-----LLGHSLGGFLATSYSIKYPD 161
Query: 280 LVKGVTLLNATPFWGF-----SPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISD 334
VK + L++ WGF P+ +R+P P V+ + + + S+
Sbjct: 162 RVKHLILVDP---WGFPLRPADPSQVRAP--------------PTWVKAVASVLGR--SN 202
Query: 335 PESIAEV---------------LKQVYADHATNVDTVFTRILE-TTQHPAAAASFASIMF 378
P ++ V K+ +AD + DT+ I Q+P+ +F ++M
Sbjct: 203 PLAVLRVAGPWGPGLVQRFRPDFKRKFADFFDD-DTISEYIYHCNAQNPSGETAFKAMM- 260
Query: 379 APQGNLSFREALSRCQM--NGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPY--YEISPA 434
+ R L R + VPI +IYG + W+ G +VK Q P++ EI A
Sbjct: 261 -ESFGWARRPMLERIHLIRKDVPITMIYGA-NTWIDTSTGKKVKLQRPDSYVRDLEIEGA 318
Query: 435 GHCPHDEVPEV 445
H + + P +
Sbjct: 319 SHHVYADQPHI 329
|
Lysophospholipase selective for N-acyl phosphatidylethanolamine (NAPE). Contributes to the biosynthesis of N-acyl ethanolamines, including the endocannabinoid anandamide by hydrolyzing the sn-1 and sn-2 acyl chains from N-acyl phosphatidylethanolamine (NAPE) generating glycerophospho-N-acyl ethanolamine (GP-NAE), an intermediate for N-acyl ethanolamine biosynthesis. Hydrolyzes substrates bearing saturated, monounsaturated, polyunsaturated N-acyl chains. Shows no significant activity towards other lysophospholipids, including lysophosphatidylcholine, lysophosphatidylethanolamine and lysophosphatidylserine. Bos taurus (taxid: 9913) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|A4VQH7|RUTD_PSEU5 Putative aminoacrylate hydrolase RutD OS=Pseudomonas stutzeri (strain A1501) GN=rutD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 60/153 (39%), Gaps = 34/153 (22%)
Query: 147 VHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPT 206
+HYE G ++P ++ G G + + QL L +DYR D LG S P P
Sbjct: 1 MHYELHGRMEPDAPTLVLSSGLGGAAAFWLPQLPALTQDYRVLVYDQLGTNKS-PANLPA 59
Query: 207 PRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLG 266
S E + E L G + C+FI G++LG
Sbjct: 60 GYSIESMAVELLELLDTLGIRR------------------CHFI-----------GHALG 90
Query: 267 GFVAVYFAACNPHLVKGVTLLNATPFWGFSPNP 299
G V + A P L++ + +NA W SPNP
Sbjct: 91 GLVGLQIALLRPQLLQSLVPINA---WS-SPNP 119
|
May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation. Pseudomonas stutzeri (strain A1501) (taxid: 379731) EC: 3 EC: . EC: 5 EC: . EC: 1 EC: . EC: - |
| >sp|Q476M7|MHPC_CUPPJ 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase OS=Cupriavidus pinatubonensis (strain JMP134 / LMG 1197) GN=mhpC PE=3 SV=1 | Back alignment and function description |
|---|
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 25/190 (13%)
Query: 250 IKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFW--GFSPNPIRSPKLAR 307
+ E+ E V+++GNS+GG AV FA NP V + L+ ++P P KL
Sbjct: 102 LDELDIERVHILGNSMGGHSAVAFALANPQRVGKLVLMGGGTGGPSLYAPMPTEGIKL-- 159
Query: 308 ILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHP 367
+G + P S+ L + + D S+ + L Q D+ +L H
Sbjct: 160 ---LNGLYREP-SIENLKRMMNVFVYDASSLTDDLMQARLDN----------MLARRDH- 204
Query: 368 AAAASFASIMFA-PQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEA 426
+F + A P+ F + SR P +I+G++D +V GL++ +P A
Sbjct: 205 --LENFVKSLAANPK---QFTDYGSRLGEITAPTLVIWGRDDRFVPMDVGLRLIAGIPNA 259
Query: 427 PYYEISPAGH 436
+ + GH
Sbjct: 260 QMHIFNRCGH 269
|
Catalyzes the cleavage of the C5-C6 bond of 2-hydroxy-6-oxononadienedioate and 2-hydroxy-6-oxononatrienedioate, a dienol ring fission product of the bacterial meta-cleavage pathway for degradation of phenylpropionic acid. Cupriavidus pinatubonensis (strain JMP134 / LMG 1197) (taxid: 264198) EC: 3 EC: . EC: 7 EC: . EC: 1 EC: . EC: 1 EC: 4 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 451 | ||||||
| 224106163 | 566 | predicted protein [Populus trichocarpa] | 0.995 | 0.793 | 0.708 | 0.0 | |
| 225449963 | 524 | PREDICTED: uncharacterized protein LOC10 | 0.995 | 0.856 | 0.709 | 0.0 | |
| 147844249 | 556 | hypothetical protein VITISV_009092 [Viti | 1.0 | 0.811 | 0.707 | 0.0 | |
| 255545291 | 481 | alpha/beta hydrolase, putative [Ricinus | 0.991 | 0.929 | 0.696 | 0.0 | |
| 449436343 | 499 | PREDICTED: uncharacterized protein LOC10 | 0.949 | 0.857 | 0.669 | 1e-170 | |
| 357458507 | 528 | Alpha/beta hydrolase-fold family protein | 0.973 | 0.831 | 0.643 | 1e-167 | |
| 356539136 | 516 | PREDICTED: uncharacterized protein LOC10 | 0.966 | 0.844 | 0.661 | 1e-167 | |
| 388497996 | 522 | unknown [Lotus japonicus] | 0.971 | 0.839 | 0.647 | 1e-166 | |
| 356542875 | 509 | PREDICTED: uncharacterized protein LOC10 | 0.953 | 0.844 | 0.643 | 1e-161 | |
| 356531629 | 519 | PREDICTED: uncharacterized protein LOC10 | 0.977 | 0.849 | 0.643 | 1e-159 |
| >gi|224106163|ref|XP_002314066.1| predicted protein [Populus trichocarpa] gi|222850474|gb|EEE88021.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/450 (70%), Positives = 370/450 (82%), Gaps = 1/450 (0%)
Query: 1 MEILSYNCPPNCQVVNLRWKLVKKASQSCESKPPSFREHRILCIRRDFRSGFSGYSISSW 60
MEIL+ + C VVNLRWKL + S S + K P+ RE +IL R + R+G +S S
Sbjct: 42 MEILTSSTASCCLVVNLRWKLAENGSNSSQLKLPTSRERKILFARTNQRNGSLRFS-SVD 100
Query: 61 CFSKNLDREKGSNSSNAVQGFRNLNSQVLSGSYDGYVIGGEEDAGSFPKEREAIPKVLIP 120
F K L+ KGS S ++ G +N NS+V SG+ YV+GGE+D GS + E+ KVLIP
Sbjct: 101 KFLKKLNHGKGSRSLDSFGGLKNGNSKVFSGNSSSYVVGGEDDVGSITENGESPTKVLIP 160
Query: 121 GLPDEYNGESGAPITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLK 180
GLPDE NGE AP++SCFW+WKPK NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLK
Sbjct: 161 GLPDESNGEYSAPVSSCFWKWKPKLNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLK 220
Query: 181 DLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVD 240
DLG+DYR WAIDFLGQGMSLP E+PT SK+G ++E K+ +WGFGD+ +PWA++L +S+D
Sbjct: 221 DLGRDYRVWAIDFLGQGMSLPVENPTLFSKDGAASEGKDSIWGFGDEIEPWANDLVFSMD 280
Query: 241 LWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPI 300
LWQDQV FI+EVI EPVY+VGNSLGGFVA+YFAA PHLVKGVTLLNATPFWGF PNPI
Sbjct: 281 LWQDQVHNFIEEVIGEPVYIVGNSLGGFVALYFAARYPHLVKGVTLLNATPFWGFLPNPI 340
Query: 301 RSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRI 360
RSP+LARI PWSGTFPLPA+VRKLI F WQKISDP+SIAE+LKQVY DH+TN+D VF+RI
Sbjct: 341 RSPRLARIFPWSGTFPLPANVRKLIAFFWQKISDPKSIAEILKQVYTDHSTNIDKVFSRI 400
Query: 361 LETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVK 420
LE TQHPAAAASFASIMFAPQG LSFRE L+RC+M+ PICL+YGKEDPWVKPVWGLQVK
Sbjct: 401 LEITQHPAAAASFASIMFAPQGQLSFRETLARCKMSDTPICLVYGKEDPWVKPVWGLQVK 460
Query: 421 RQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450
+QVPEAPYYEISPAGHCPHDEVPE + L
Sbjct: 461 QQVPEAPYYEISPAGHCPHDEVPEAVNYLL 490
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225449963|ref|XP_002271167.1| PREDICTED: uncharacterized protein LOC100265442 [Vitis vinifera] gi|296085106|emb|CBI28601.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/451 (70%), Positives = 369/451 (81%), Gaps = 2/451 (0%)
Query: 1 MEILSYNCPPNCQVVNLRWKLVKKASQSCESKPPSFREHRILCIRRDFRSGFSGYS-ISS 59
MEILS + P C++VNL V K+S S ++K P R +RILC R + G SGYS +
Sbjct: 1 MEILSCHSAPCCKLVNLGGTSVHKSSGSSQAKLPGSRNNRILCARIGSKLGSSGYSNLDD 60
Query: 60 WCFSKNLDREKGSNSSNAVQGFRNLNSQVLSGSYDGYVIGGEEDAGSFPKEREAIPKVLI 119
+C +KN R +GS S A +G N+NS+ LS SY+GYVI G+E G + + I ++LI
Sbjct: 61 FC-TKNFGRHEGSRSLTAFKGSANVNSKALSESYNGYVIDGKEGVGDISERGDLITQILI 119
Query: 120 PGLPDEYNGESGAPITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQL 179
PGLPD+ N +SGA I+SCFWEWKPK VHYEK+GCENVNSPPVLFLPGFGVGSFHYEKQL
Sbjct: 120 PGLPDDSNDDSGAQISSCFWEWKPKLTVHYEKSGCENVNSPPVLFLPGFGVGSFHYEKQL 179
Query: 180 KDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSV 239
KDLG+D+R WA+DFLGQGMSLP EDP P+SK+ +E +F WGFGD+ +PWA+EL YS+
Sbjct: 180 KDLGRDFRVWAVDFLGQGMSLPFEDPAPQSKKELDSERNDFSWGFGDETEPWANELVYSI 239
Query: 240 DLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNP 299
DLWQDQV YFI++VI EPVY+VGNSLGGFVA+YFAACNP LVKGVTLLNATPFWGF PNP
Sbjct: 240 DLWQDQVRYFIEQVIGEPVYIVGNSLGGFVALYFAACNPQLVKGVTLLNATPFWGFLPNP 299
Query: 300 IRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTR 359
RSP LARI PW+GTFPLPA VRKL EF+WQKISDP SI EVLKQVYADH+T VD VF+R
Sbjct: 300 SRSPSLARIFPWAGTFPLPAFVRKLTEFVWQKISDPRSIGEVLKQVYADHSTKVDKVFSR 359
Query: 360 ILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQV 419
ILETTQHPAAAASFASIMFAPQG LSF EALSRCQM+ VPICL+YGKEDPWV+PVWGLQV
Sbjct: 360 ILETTQHPAAAASFASIMFAPQGQLSFSEALSRCQMSNVPICLMYGKEDPWVRPVWGLQV 419
Query: 420 KRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450
KRQ+ EAPYYEISPAGHCPHDEVPEV + L
Sbjct: 420 KRQLLEAPYYEISPAGHCPHDEVPEVVNYLL 450
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147844249|emb|CAN82121.1| hypothetical protein VITISV_009092 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/451 (70%), Positives = 365/451 (80%)
Query: 1 MEILSYNCPPNCQVVNLRWKLVKKASQSCESKPPSFREHRILCIRRDFRSGFSGYSISSW 60
MEILS + P C++VNL V K+S S ++K P R +RILC R + G SGYS
Sbjct: 1 MEILSCHSAPCCKLVNLXGTSVHKSSGSSQAKLPGSRNNRILCARIGSKLGSSGYSNLDD 60
Query: 61 CFSKNLDREKGSNSSNAVQGFRNLNSQVLSGSYDGYVIGGEEDAGSFPKEREAIPKVLIP 120
+KN R +GS S A +G N+NS+ LS SY+GYVI G+E G + + I ++LIP
Sbjct: 61 XCTKNXGRHEGSRSLTAFKGSANVNSKALSESYNGYVIDGKEGVGDISERGDLITQILIP 120
Query: 121 GLPDEYNGESGAPITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLK 180
GLPD+ N +SGA I+SCFWEWKPK VHYEK+GCENVNSPPVLFLPGFGVGSFHYEKQLK
Sbjct: 121 GLPDDSNDDSGAQISSCFWEWKPKLTVHYEKSGCENVNSPPVLFLPGFGVGSFHYEKQLK 180
Query: 181 DLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVD 240
DLG+D+R WA+DFLGQGMSLP EDP P+SK+ +E +F WGFGD+ +PWA+EL YS+D
Sbjct: 181 DLGRDFRVWAVDFLGQGMSLPFEDPAPQSKKELDSERNDFSWGFGDETEPWANELVYSID 240
Query: 241 LWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPI 300
LWQDQV YFI++VI EPVY+VGNSLGGFVA+YFAACNP LVKGVTLLNATPFWGF PNP
Sbjct: 241 LWQDQVRYFIEQVIGEPVYIVGNSLGGFVALYFAACNPQLVKGVTLLNATPFWGFLPNPS 300
Query: 301 RSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRI 360
RSP LARI PW+GTFPLPA VRKL EF+WQKISDP SI EVLKQVYADH+T VD VF+RI
Sbjct: 301 RSPSLARIFPWAGTFPLPAFVRKLTEFVWQKISDPRSIGEVLKQVYADHSTKVDKVFSRI 360
Query: 361 LETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVK 420
LETTQHPAAAASFASIMFAPQG LSF EALSRCQ++ VPICL+YGKEDPWVKPVWGLQVK
Sbjct: 361 LETTQHPAAAASFASIMFAPQGQLSFSEALSRCQVSNVPICLMYGKEDPWVKPVWGLQVK 420
Query: 421 RQVPEAPYYEISPAGHCPHDEVPEVCSLCLL 451
RQ+ EAPYYEISPAGHCPHDEVPE LL
Sbjct: 421 RQLLEAPYYEISPAGHCPHDEVPEDVLQMLL 451
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255545291|ref|XP_002513706.1| alpha/beta hydrolase, putative [Ricinus communis] gi|223547157|gb|EEF48653.1| alpha/beta hydrolase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/454 (69%), Positives = 366/454 (80%), Gaps = 7/454 (1%)
Query: 1 MEILSYNCPPNCQVVNLRWKLVKKASQSCESKPPSFREHRILCIRRDFRSGFSGYSISSW 60
M+IL++N + + + KLV K SC+SK + + ++ C R D G +S S+
Sbjct: 20 MDILTFNVTTSHRTAHFGSKLVDKTKYSCKSKVSTIIKPQVFCARIDQSCGLLRFSSSN- 78
Query: 61 CFSKNLDREKG---SNSSNAVQGFRNLNSQVLSGSYDGYVIGGEEDAGSFPKEREAIPKV 117
K LD K S NA++G + +NS+VLSG+Y+GYVI +ED S E+ P++
Sbjct: 79 ---KFLDYPKKIEVSKKHNALKGIKVVNSKVLSGNYNGYVIEADEDMESVSGSGESTPEI 135
Query: 118 LIPGLPDEYNGESGAPITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEK 177
LIPGLP+E +GE GAPI SCFWEWKPK VHYEKAGCENV SPPVLFLPGFGVGSFH+E
Sbjct: 136 LIPGLPNESSGECGAPINSCFWEWKPKLYVHYEKAGCENVKSPPVLFLPGFGVGSFHFEN 195
Query: 178 QLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAY 237
QLKDLG+DYR WAIDFLGQGMSLP E+PT + +EGD E KN WGFGD+ +PWA+EL Y
Sbjct: 196 QLKDLGRDYRVWAIDFLGQGMSLPVENPTLQLREGDILEGKNSFWGFGDETEPWANELVY 255
Query: 238 SVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSP 297
S+DLW+DQV YFI+EVI EPVYVVGNSLGGFVA+YFAA NP LVKGVTLLNATPFWGF P
Sbjct: 256 SMDLWRDQVRYFIEEVIGEPVYVVGNSLGGFVAIYFAASNPQLVKGVTLLNATPFWGFLP 315
Query: 298 NPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVF 357
NPIRSP+LARI+PWSGTFPLPASVRKL EF WQKISDP+SIA+VLKQVYADH+TNVD VF
Sbjct: 316 NPIRSPRLARIIPWSGTFPLPASVRKLTEFFWQKISDPKSIAQVLKQVYADHSTNVDQVF 375
Query: 358 TRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGL 417
+RIL+ TQHPAAAASFASIMFAPQG LSFRE L RC+MN +PICL+YG+EDPWVKP+WGL
Sbjct: 376 SRILKITQHPAAAASFASIMFAPQGQLSFRECLMRCKMNNLPICLLYGREDPWVKPIWGL 435
Query: 418 QVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCLL 451
QVKRQVPEA YYEISPAGHCPHDEVPEVCSL L
Sbjct: 436 QVKRQVPEASYYEISPAGHCPHDEVPEVCSLSLF 469
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449436343|ref|XP_004135952.1| PREDICTED: uncharacterized protein LOC101211727 [Cucumis sativus] gi|449488801|ref|XP_004158176.1| PREDICTED: uncharacterized protein LOC101228189 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 603 bits (1556), Expect = e-170, Method: Compositional matrix adjust.
Identities = 302/451 (66%), Positives = 345/451 (76%), Gaps = 23/451 (5%)
Query: 1 MEILSYNCPPNCQVVNLRWKLVKKASQSCESKPPSFREHRILCIRRDFRSGFSGYSISSW 60
ME LS + P+ +V LR K +K+ FR +ILC R R+ FS W
Sbjct: 1 MEALSCSSIPSSNIVFLRTKCARKSLNPSCVNLSGFRRRKILCARIKARTRFS------W 54
Query: 61 CFSKNLDREKGSNSSNAVQGFRNLNSQVLSGSYDGYVIGGEEDAG-SFPKEREAIPKVLI 119
K + S+ ++ VL SY GYVI GEE S P+ ++ KV I
Sbjct: 55 --------SKHHHESSQLK--------VLCSSYGGYVIDGEEGGSVSIPESGKSASKVQI 98
Query: 120 PGLPDEYNGESGAPITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQL 179
PGLPDE NGES A I+S FWEWKPK +VHYEKAG ENV SPPVLFLPGFGVGSFHYEKQL
Sbjct: 99 PGLPDESNGESSAEISSGFWEWKPKLSVHYEKAGSENVKSPPVLFLPGFGVGSFHYEKQL 158
Query: 180 KDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSV 239
KDLG+DYR WAIDFLGQGMSLP EDPT SKEG+ ++ K+ WGFGDK +PWASEL YS+
Sbjct: 159 KDLGRDYRVWAIDFLGQGMSLPVEDPTSHSKEGNESDGKDSSWGFGDKTEPWASELVYSI 218
Query: 240 DLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNP 299
DLWQDQV YFI++VI EPVY+VGNSLGGFVA+YFAACNP LVKGVTLLNATPFWGF PNP
Sbjct: 219 DLWQDQVRYFIEQVIGEPVYIVGNSLGGFVALYFAACNPDLVKGVTLLNATPFWGFFPNP 278
Query: 300 IRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTR 359
IRSP+LA++ PW G FPLP +VRKL +F+WQKISDPESI ++L+QVYADH TNVD VF R
Sbjct: 279 IRSPRLAKLFPWGGKFPLPDNVRKLTKFVWQKISDPESIGDILRQVYADHTTNVDDVFCR 338
Query: 360 ILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQV 419
I+ETTQHPAAAASFASIMFAPQG LSF EALSRC N VP+CL+YGKEDPWVKPVWGL+V
Sbjct: 339 IVETTQHPAAAASFASIMFAPQGKLSFWEALSRCHENSVPVCLMYGKEDPWVKPVWGLEV 398
Query: 420 KRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450
K++VPEAPYYEISPAGHCPHDEVPEV + L
Sbjct: 399 KKRVPEAPYYEISPAGHCPHDEVPEVVNFLL 429
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357458507|ref|XP_003599534.1| Alpha/beta hydrolase-fold family protein [Medicago truncatula] gi|355488582|gb|AES69785.1| Alpha/beta hydrolase-fold family protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 593 bits (1528), Expect = e-167, Method: Compositional matrix adjust.
Identities = 298/463 (64%), Positives = 350/463 (75%), Gaps = 24/463 (5%)
Query: 1 MEILSYNCPPNCQVVNLRWKLVKKASQSCESKPPSFREHRILCIRRDFRSGF---SGYSI 57
ME LSY P CQV+N + K VK +S S +S R+ IR++ GF + Y+I
Sbjct: 1 METLSYGSAPCCQVMNTKTKSVKNSSNSTQS--------RVFYIRKN--GGFYINNLYTI 50
Query: 58 SSWCFSKNLDREKGSNSSNAVQGFRNLNSQVLSGSYDGYVIGGEEDAGSFPKEREAIPKV 117
S F +++ G S + +G + L +V SGSY YVI E + A KV
Sbjct: 51 GSLRFYDKGNQQSGFRSQSVFEGSKRLKFKVNSGSYGDYVINEGEGRDIVGVDVPA-SKV 109
Query: 118 LIPGLPDEYNGESGAPITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEK 177
LIPGLPDE NGESGA I SCF WKPK NVHYEKAGCEN++SP VLFLPGFGVGSFHYEK
Sbjct: 110 LIPGLPDESNGESGAVIRSCFKGWKPKLNVHYEKAGCENLDSPNVLFLPGFGVGSFHYEK 169
Query: 178 QLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFL-WGFGDKAQPWASELA 236
QL DLG+D+R WA+DFLGQGMSLP EDP P SKEG T N WGFGD+ +PWA+EL
Sbjct: 170 QLMDLGRDFRVWALDFLGQGMSLPFEDPAPSSKEGGVTSSGNVSPWGFGDETEPWANELV 229
Query: 237 YSVDLWQDQVCYFIKEV---------IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLL 287
YSVDLWQDQV YFI+EV I EPVY+VGNSLGG+VA+YFAAC PHLVKGVTLL
Sbjct: 230 YSVDLWQDQVRYFIEEVNDLHCLVAVIGEPVYIVGNSLGGYVALYFAACYPHLVKGVTLL 289
Query: 288 NATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYA 347
NATPFWGF PNP++SP LA++ PW+GTFPLP++++KL E +W+KISDP+SIA+VL QVYA
Sbjct: 290 NATPFWGFLPNPVKSPGLAKVFPWAGTFPLPSNIKKLTELVWEKISDPKSIADVLNQVYA 349
Query: 348 DHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKE 407
DH+ NVD VF+RI+ETT+HPAAAASFASIMFAPQG LSF E LSRC+ N VPICL+YGKE
Sbjct: 350 DHSINVDNVFSRIIETTRHPAAAASFASIMFAPQGELSFSETLSRCRANKVPICLMYGKE 409
Query: 408 DPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450
DPWV P+WGLQVKR+VPEAPYY+ISPAGHCPHDEVPEV + L
Sbjct: 410 DPWVTPIWGLQVKRKVPEAPYYQISPAGHCPHDEVPEVINFLL 452
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356539136|ref|XP_003538056.1| PREDICTED: uncharacterized protein LOC100797968 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 593 bits (1528), Expect = e-167, Method: Compositional matrix adjust.
Identities = 299/452 (66%), Positives = 344/452 (76%), Gaps = 16/452 (3%)
Query: 1 MEILSYNCPPNCQVVNLRWKLVKKASQSCESKPPSFREHRILCIRRDFRSGFSGYSISSW 60
ME LSY P CQVVN +WKLV+K+ S R+ R+ I + G S
Sbjct: 1 METLSYGSAPCCQVVNSKWKLVEKSLSS--------RQSRVSSIGK---LGVYYTGTISA 49
Query: 61 CFSKNLDREKGSNSSNAVQGFRNLNSQVLSGSYD-GYVIGGEEDAGSFPKEREAIPKVLI 119
C E G+ ++ + N +V SGSYD GYVIG EE E KVLI
Sbjct: 50 CAPVRF-YEMGTRVQ--LRSSKRFNFKVCSGSYDDGYVIGEEEARDISGLEEPVTTKVLI 106
Query: 120 PGLPDEYNGESGAPITSCFWEWKPKFNVHYEKAGCENVNS-PPVLFLPGFGVGSFHYEKQ 178
PGLPD+ GESGAPI+SCFW WKPK NVHYEKAGCENVN P VLFLPGFGVGSFHYEKQ
Sbjct: 107 PGLPDDSKGESGAPISSCFWGWKPKLNVHYEKAGCENVNDLPRVLFLPGFGVGSFHYEKQ 166
Query: 179 LKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYS 238
LKDLG+DYR WA+DFLGQGMSLP EDP P S E ++ WGFGD+ +PWA++L YS
Sbjct: 167 LKDLGRDYRVWALDFLGQGMSLPFEDPAPLSNEEAASNGSVSSWGFGDETKPWATKLVYS 226
Query: 239 VDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPN 298
VDLWQDQV FI+EVI EPVY+VGNSLGG VA+YFAA NPHLVKGV LLNATPFWGF PN
Sbjct: 227 VDLWQDQVRCFIEEVIGEPVYLVGNSLGGLVALYFAANNPHLVKGVALLNATPFWGFLPN 286
Query: 299 PIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFT 358
PI+SP+LA+I PW+GTFPLP+S+++L E +W+KISDP+SIAEVL QVYADH+TNVD VF+
Sbjct: 287 PIKSPRLAKIFPWAGTFPLPSSIKRLTELLWEKISDPKSIAEVLSQVYADHSTNVDNVFS 346
Query: 359 RILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQ 418
RI+ETT+HPAAAASFASIMFAPQG LSF E LSRC+ N VPICL+YGKEDPWV P+WGLQ
Sbjct: 347 RIVETTRHPAAAASFASIMFAPQGELSFNETLSRCRANNVPICLMYGKEDPWVGPIWGLQ 406
Query: 419 VKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450
VKRQVPEAPYY+ISPAGHCPHDEVPE+ + L
Sbjct: 407 VKRQVPEAPYYQISPAGHCPHDEVPEIINFLL 438
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388497996|gb|AFK37064.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 590 bits (1520), Expect = e-166, Method: Compositional matrix adjust.
Identities = 296/457 (64%), Positives = 348/457 (76%), Gaps = 19/457 (4%)
Query: 1 MEILSYNCPPNCQVVNLRWKLVKKASQSCESKPPSFREHRILCIRRDFRSGFSGYSISSW 60
ME LSY P CQVVN + K+V K S R+ R+ CIR+ GF S S
Sbjct: 1 METLSYGSAPCCQVVNSKLKVVDKGWNS--------RQSRVSCIRK---RGFDYTSTVSS 49
Query: 61 CFS---KNLDREKG-SNSSNAVQGFRNLNSQVLSGSYDGYVIGGEEDAGSFPKEREAIPK 116
C S ++ +++G +A + R L +V SG YDGYVIG EE+ E K
Sbjct: 50 CGSVMFYDMGQQRGYCRVKSAFESSRRLKFKVYSGGYDGYVIG-EEEVRDVSGVEEPATK 108
Query: 117 VLIPGLPDEYNGESG-APITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHY 175
VLIPGLPDE NGESG API+SCFW WKPKF VHYEKAGCENV+SPPVLFLPGFGVGSFHY
Sbjct: 109 VLIPGLPDESNGESGGAPISSCFWGWKPKFTVHYEKAGCENVDSPPVLFLPGFGVGSFHY 168
Query: 176 EKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFL--WGFGDKAQPWAS 233
EKQLKDLG D+R WA+DFLGQGMSLP EDP P SKEG +T + WGFGD+ +PWA+
Sbjct: 169 EKQLKDLGLDFRVWALDFLGQGMSLPFEDPVPLSKEGATTTSNGNVSSWGFGDETEPWAA 228
Query: 234 ELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFW 293
EL YS DLW+DQV Y I+EVI EPVY+VGNSLGG+VA+YFAAC PHLVKGVTLLNATPFW
Sbjct: 229 ELVYSADLWKDQVRYLIEEVIGEPVYLVGNSLGGYVALYFAACYPHLVKGVTLLNATPFW 288
Query: 294 GFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNV 353
GF PNP+++P+L +I W+GTFPLP++++ L +W+KISDP+SIA+VL QVYADH+ NV
Sbjct: 289 GFLPNPVKNPRLGKIFRWTGTFPLPSNIKSLTMLLWEKISDPKSIAQVLNQVYADHSINV 348
Query: 354 DTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKP 413
D VF+RI+ETT+HPAAAASFASIM AP+G LSF E LSRC+ N VPI L+YGKEDPWVKP
Sbjct: 349 DNVFSRIIETTRHPAAAASFASIMCAPRGELSFNETLSRCRANNVPIRLMYGKEDPWVKP 408
Query: 414 VWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450
WG QVK+QVPEAPYY+ISPAGHCPHDEVPEV + L
Sbjct: 409 FWGSQVKKQVPEAPYYQISPAGHCPHDEVPEVINFLL 445
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356542875|ref|XP_003539890.1| PREDICTED: uncharacterized protein LOC100791985 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 291/452 (64%), Positives = 349/452 (77%), Gaps = 22/452 (4%)
Query: 1 MEILSYNCPPNCQVVNLRWKLVKKASQSCESKPPSFREHRILCIRRDFRSGFSGYSISSW 60
M+ LS P CQ V+++WKLV K S +++ PS RSG S
Sbjct: 1 MDFLSCGSGPCCQAVDMKWKLVGKCLNSRQARFPSVGN----------RSG-------SV 43
Query: 61 CFSKNLDREKGSNSSNAVQGFRNLNSQVLSGSYDGYVIGGEEDAGSFPK-EREAIPKVLI 119
F N + ++ S +A++G + N + S SYDGYVIGGEED E A V+I
Sbjct: 44 RFHDNKELQRDFGSLSALEGSKRTNCKAYSESYDGYVIGGEEDVADISGVEEPATNNVVI 103
Query: 120 PGLPDEYNGESGAPITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQL 179
PGLPD G +GAPI+SCFWEWKPK NVHYEKAGCENV+SP VLFLPGFGVGSFHYEKQL
Sbjct: 104 PGLPD---GSNGAPISSCFWEWKPKLNVHYEKAGCENVDSPHVLFLPGFGVGSFHYEKQL 160
Query: 180 KDLGKDYRAWAIDFLGQGMSLPDEDPTPR-SKEGDSTEEKNFLWGFGDKAQPWASELAYS 238
+DLG+D R WA+DFLGQG+SLP EDP P +KEG ++ WGFGD+ +PWA++L YS
Sbjct: 161 RDLGRDTRVWALDFLGQGLSLPFEDPAPHYNKEGATSNGNASSWGFGDETEPWATKLVYS 220
Query: 239 VDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPN 298
+DLWQDQV YFI+EVI EPVY+VGNSLGG+VA+Y AA NPHLVKGVTLLNATPFWGF PN
Sbjct: 221 IDLWQDQVRYFIEEVIGEPVYIVGNSLGGYVALYSAARNPHLVKGVTLLNATPFWGFLPN 280
Query: 299 PIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFT 358
PI++P LA+ LPW+GTFPLP++V++L E +W+KISDP SIAEVL QVYA+++TNVD+VF+
Sbjct: 281 PIKNPGLAKFLPWAGTFPLPSNVKRLTELVWEKISDPASIAEVLNQVYAENSTNVDSVFS 340
Query: 359 RILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQ 418
RI+ETT+HPAAAA+FASIMFAPQ LSF EALSRCQ + VPICL+YGKEDPWVKP+WGLQ
Sbjct: 341 RIIETTRHPAAAAAFASIMFAPQAELSFSEALSRCQKSNVPICLMYGKEDPWVKPLWGLQ 400
Query: 419 VKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450
VKRQVPEA YY+ISPAGHCPHDEVPEV + L
Sbjct: 401 VKRQVPEASYYQISPAGHCPHDEVPEVINFLL 432
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356531629|ref|XP_003534379.1| PREDICTED: uncharacterized protein LOC100802865 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 569 bits (1467), Expect = e-159, Method: Compositional matrix adjust.
Identities = 291/452 (64%), Positives = 349/452 (77%), Gaps = 11/452 (2%)
Query: 1 MEILSYNCPPNCQVVNLRWKLVKKASQSCESKPPSFREHRILCIRRDFRSGFSGYSISSW 60
MEILSY P Q V+ +WKLV K S +S+ PS + RSG S+
Sbjct: 1 MEILSYGSGPCSQAVDSKWKLVDKCLNSRQSRFPSVGNGGVYYTNTISRSG----SVRFH 56
Query: 61 CFSKNLDREKGSNSSNAVQGFRNLNSQVLSGSYDGYVIGGEEDAGSFPK-EREAIPKVLI 119
+K L R+ GS S A++G + N + S S DGYVIGGEED E A KV+I
Sbjct: 57 DTNKELQRDFGSLS--ALEGSKRTNCKAYSESCDGYVIGGEEDVADIAGVEEPATNKVVI 114
Query: 120 PGLPDEYNGESGAPITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQL 179
PGLPD G +GAPI+SCFWEWKPK NV+YEKAGCENV+SP VLFLPGFGVGSFHYEKQL
Sbjct: 115 PGLPD---GSNGAPISSCFWEWKPKLNVYYEKAGCENVDSPHVLFLPGFGVGSFHYEKQL 171
Query: 180 KDLGKDYRAWAIDFLGQGMSLPDEDPTPR-SKEGDSTEEKNFLWGFGDKAQPWASELAYS 238
+DLG+D R WA+DFLGQG+SLP EDP P +KEG +++ WGFGD+ +PWA++L YS
Sbjct: 172 RDLGRDTRVWALDFLGQGLSLPFEDPAPHYNKEGVTSDGNASSWGFGDETEPWATKLVYS 231
Query: 239 VDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPN 298
+DLWQDQV YFI+EVI EPVY+VGNSLGG+VA+Y AA NPHLVKGVTLLNATPFWGF PN
Sbjct: 232 IDLWQDQVRYFIEEVIGEPVYIVGNSLGGYVALYSAARNPHLVKGVTLLNATPFWGFLPN 291
Query: 299 PIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFT 358
PI+SP LA+ PW+GTFPLP +V++L E +W+KISDP SIAEVL QVYA+++TNVD+VF+
Sbjct: 292 PIKSPGLAKFFPWAGTFPLPTNVKRLTELVWEKISDPASIAEVLNQVYAENSTNVDSVFS 351
Query: 359 RILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQ 418
RI+ETT+HPAAAA+FASIMFAP+ LSF EALS C+ + VPICL+YGKEDPWV+P+WG Q
Sbjct: 352 RIIETTRHPAAAAAFASIMFAPRAELSFSEALSGCRKSNVPICLMYGKEDPWVRPLWGHQ 411
Query: 419 VKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450
VKRQVPEA YY+ISPAGHCPHDEVPEV + L
Sbjct: 412 VKRQVPEASYYQISPAGHCPHDEVPEVINFLL 443
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 451 | ||||||
| TAIR|locus:2159033 | 484 | PPH "AT5G13800" [Arabidopsis t | 0.864 | 0.805 | 0.628 | 2.6e-145 | |
| TAIR|locus:2115440 | 378 | AT4G36530 [Arabidopsis thalian | 0.494 | 0.589 | 0.327 | 5.1e-30 | |
| TAIR|locus:2832896 | 359 | AT5G19850 [Arabidopsis thalian | 0.474 | 0.596 | 0.242 | 6e-22 | |
| TAIR|locus:2122654 | 692 | AT4G25290 [Arabidopsis thalian | 0.481 | 0.313 | 0.269 | 1.6e-13 | |
| TAIR|locus:2159823 | 374 | AT5G38520 [Arabidopsis thalian | 0.536 | 0.647 | 0.214 | 4.1e-07 | |
| UNIPROTKB|Q48LN2 | 262 | catD1 "3-oxoadipate enol-lacto | 0.146 | 0.251 | 0.289 | 1.2e-05 | |
| TAIR|locus:2135843 | 393 | AT4G12830 [Arabidopsis thalian | 0.097 | 0.111 | 0.454 | 0.00016 | |
| TAIR|locus:2157260 | 330 | AT5G39220 [Arabidopsis thalian | 0.232 | 0.318 | 0.308 | 0.00094 |
| TAIR|locus:2159033 PPH "AT5G13800" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1388 (493.7 bits), Expect = 2.6e-145, Sum P(2) = 2.6e-145
Identities = 245/390 (62%), Positives = 296/390 (75%)
Query: 56 SISSWCFSKNLDREKGSNSSNAVQGFRNLNSQVLSGSYDGYVIGGEEDAGSFPKEREAIP 115
S+ +W R + SS G + + SG+ DGYV+G +D G + E+
Sbjct: 13 SVVTWSSKLATKRLVPNRSSLLFSGVKKSRLVIRSGNSDGYVVGENDDLGRIARRGESTS 72
Query: 116 KVLIPGLPDEYNGESGAPITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHY 175
KVLIPGLPDE NGE A I+ EWKPK VHYEKAGC+N+++P VLFLPGFGVGSFHY
Sbjct: 73 KVLIPGLPDESNGEIAARISHSHCEWKPKLRVHYEKAGCDNLDAPAVLFLPGFGVGSFHY 132
Query: 176 EKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASEL 235
EKQL DLG+DYR WAIDFLGQG+SLP EDPT ++E S+E+K WGFGDK +PWA +L
Sbjct: 133 EKQLTDLGRDYRVWAIDFLGQGLSLPTEDPTTMTEETSSSEDKEPFWGFGDKTEPWADQL 192
Query: 236 AYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGF 295
+S+DLW+DQV YF++EVI EPVY+ GNSLGG+VA+YFAA +PHLVKGVTLLNATPFWGF
Sbjct: 193 VFSLDLWRDQVQYFVEEVIGEPVYIAGNSLGGYVALYFAATHPHLVKGVTLLNATPFWGF 252
Query: 296 SPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDT 355
PNP+RSPKLAR+ PW G FPLP V+K+ E +WQKISDPESIAE+LKQVY DH+ NVD
Sbjct: 253 FPNPVRSPKLARLFPWPGAFPLPERVKKITELVWQKISDPESIAEILKQVYTDHSINVDK 312
Query: 356 VFTRILETTQHPXXXXXXXXXXXXPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVW 415
VF+RI+E TQHP P G LSF EALSRC+ N V ICL+YG+EDPWV+P+W
Sbjct: 313 VFSRIVEVTQHPAAAASFASIMLAPGGELSFSEALSRCKENNVQICLMYGREDPWVRPLW 372
Query: 416 GLQVKRQVPEAPYYEISPAGHCPHDEVPEV 445
G ++K+++P APYYEISPAGHCPHDEVPEV
Sbjct: 373 GKKIKKEIPNAPYYEISPAGHCPHDEVPEV 402
|
|
| TAIR|locus:2115440 AT4G36530 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 264 (98.0 bits), Expect = 5.1e-30, Sum P(2) = 5.1e-30
Identities = 77/235 (32%), Positives = 106/235 (45%)
Query: 221 LWGFGDKAQPWASE--LAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNP 278
L GFG W+ + + Y +W DQV F+KEV++EP VVGNSLGGF A+ A P
Sbjct: 133 LLGFG-----WSDKALIEYDAMVWTDQVIDFMKEVVKEPAVVVGNSLGGFTALSVAVGLP 187
Query: 279 HLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLI-EFIWQKISDPES 337
V GV LLN+ + R ++ PL ++++ F++ + P
Sbjct: 188 EQVTGVALLNSAGQFAAESRK-REEADETVITKFIVKPLKEIFQRVVLGFLFWQAKQPSR 246
Query: 338 IAEVLKQVYADHATNVDTVFTR-ILETTQHPXXXXXXXXXXXXPQGNLSFREALSRCQMN 396
I VLK VY D +TNVD I + P N S S
Sbjct: 247 IESVLKSVYID-STNVDDYLVESISKPATDPNAGEVYYRLMTRFLTNQSRYTLDSVLSKM 305
Query: 397 GVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCLL 451
P+ L++G DPWV P ++K + + AGHCPHDEVPE + LL
Sbjct: 306 TCPLLLVWGDLDPWVGPAKAEKIKAFYSNSSLVHLQ-AGHCPHDEVPEAVNKALL 359
|
|
| TAIR|locus:2832896 AT5G19850 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 182 (69.1 bits), Expect = 6.0e-22, Sum P(2) = 6.0e-22
Identities = 55/227 (24%), Positives = 101/227 (44%)
Query: 222 WGFGDKAQP--WASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPH 279
+G+ DK P + E Y+ + W +Q+ F +V+++ + + NS+GG V + A P
Sbjct: 131 YGYSDKPNPREFGGEPFYTFETWGEQLNDFCLDVVKDEAFFICNSIGGLVGLQAAVSKPE 190
Query: 280 LVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIA 339
+ +G+ L+N + + P + R P+ +F + + ++ I+ PE++
Sbjct: 191 ICRGLMLINISLRMLHIK---KQPFIGR--PFIKSFQNLLRNTPVGKLFFKSIAKPETVK 245
Query: 340 EVLKQVYADHATNVDTVFTRILETTQHPXXXXXXXXXXXXPQGNLSFREALSRCQMNGVP 399
+L Q Y D + D + IL P G L E L + P
Sbjct: 246 SILCQCYHDSSQVTDELVEAILRPGLEPGAVDVFLEFICYSGGPLP--EDL--LPLVKCP 301
Query: 400 ICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISP-AGHCPHDEVPEV 445
+ + +G++DPW +P+ + + + P AGHCP DE PE+
Sbjct: 302 VLIAWGEKDPW-EPIELGRAYSNFDAVEDFVVLPDAGHCPQDEKPEM 347
|
|
| TAIR|locus:2122654 AT4G25290 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 174 (66.3 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 66/245 (26%), Positives = 105/245 (42%)
Query: 208 RSKEGDSTEEKNFLW-----GFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVG 262
R + KN +W GFG +P + Y+ LW + + F+ EV+ EP + VG
Sbjct: 433 RDNVDNIVNSKNRVWTITVLGFGKSEKP---NIIYTELLWAELLRDFMAEVVGEPAHCVG 489
Query: 263 NSLGGFVAVYFAACNPHLVKGVTLLNATP--FWGFSPNPIRSPKLARILPWSGTFPLPAS 320
NS+GG+ A P LVK V L+N+ G+SP PI + R+ P+ F
Sbjct: 490 NSIGGYFVALMAFLWPALVKSVVLVNSAGNVVPGYSPLPISRER--RV-PFGAQFG---- 542
Query: 321 VRKLIEFIWQKISDPESIAEVLKQVYADHATNVDT-VFTRILETTQHPXXXXXXXXXXXX 379
+L+ F Q ++ ++LK Y D + T +L ++ P
Sbjct: 543 -SRLLLFFLQL-----NVKKLLKDCYPVKPERADDFLVTEMLRASRDPGVVMVLESIFGF 596
Query: 380 PQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPH 439
+L L + + +I G EDP P + + +++ A + AGHCPH
Sbjct: 597 DL-SLPLNYLLKGFEEKTL---VIQGMEDPISDPQKKVALLKELCPAMVIKKVKAGHCPH 652
Query: 440 DEVPE 444
DE+ E
Sbjct: 653 DEISE 657
|
|
| TAIR|locus:2159823 AT5G38520 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 145 (56.1 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 58/271 (21%), Positives = 109/271 (40%)
Query: 195 GQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI 254
G G S+P + + T L GFG +P +Y+++ W + + F++EV+
Sbjct: 98 GFGASIPHWRRNINALSKNHTVYAIDLLGFGASDKP--PGFSYTMESWAELILNFLEEVV 155
Query: 255 REPVYVVGNSLGGFVAVYFAA-------------CNPHLVKGVTLLNATPFWGFSPNPIR 301
++P ++GNS+G V A+ LVKG+ LLN G + +
Sbjct: 156 QKPTILIGNSVGSLACVIAASGTKFLIYLEKKTESRGDLVKGLVLLNCAG--GMNNKAVF 213
Query: 302 SP-KLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRI 360
++ ++P R + ++ ++ D E++ +L VY + NVD I
Sbjct: 214 DDWRIKLLMPLLLLIDFLLKQRGIASALFNRVKDRENLKNILTNVYGNK-DNVDDTLVEI 272
Query: 361 LETTQHPXXXXXXXXXXXX-PQGNLSFREALSRCQMNGVPICLIYGKED---PWVKPV-- 414
+ + P G + + P+ +++G +D P PV
Sbjct: 273 IAGPANTEGALDAFVSILTGPPGPNPIKLIPEITK----PVLVLWGDQDGLTPLDGPVGK 328
Query: 415 WGLQVKRQVPEAPYYEISPAGHCPHDEVPEV 445
+ + Q+P Y + GHCP D+ P++
Sbjct: 329 YFTSLPDQLPNFNLYVLQGVGHCPQDDRPDL 359
|
|
| UNIPROTKB|Q48LN2 catD1 "3-oxoadipate enol-lactonase" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)] | Back alignment and assigned GO terms |
|---|
Score = 95 (38.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 20/69 (28%), Positives = 36/69 (52%)
Query: 223 GFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVK 282
G G +P+ YS+ + V I+ + PV+++G S+GG + A PHL+K
Sbjct: 55 GHGRSDKPYGR---YSIQAMSNDVEALIEHLHLGPVHLIGLSMGGMIGFQLAVDQPHLLK 111
Query: 283 GVTLLNATP 291
+ ++N+ P
Sbjct: 112 SLCIVNSAP 120
|
|
| TAIR|locus:2135843 AT4G12830 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 99 (39.9 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 156 NVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMS 199
+V+SPPV+ + GF ++ Y K + L K+YRA A D+LG G S
Sbjct: 130 SVDSPPVILIHGFPSQAYSYRKTIPVLSKNYRAIAFDWLGFGFS 173
|
|
| TAIR|locus:2157260 AT5G39220 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 98 (39.6 bits), Expect = 0.00094, Sum P(3) = 0.00093
Identities = 37/120 (30%), Positives = 55/120 (45%)
Query: 222 WGFGD--KAQPW--ASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACN 277
WGF D K P AS+ + +LW K I+ P+ +VG SLG VAV F A
Sbjct: 119 WGFSDLEKLPPCDAASKRHHLFELW--------KTYIKRPMILVGPSLGATVAVDFTATY 170
Query: 278 PHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPES 337
P V + L+NA +S R +L + + ++G L + +L+ + S P S
Sbjct: 171 PEAVDKLVLINAN---AYSEGTGRLKELPKSIAYAGVKLLKSFPLRLLANVLAFCSSPLS 227
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 451 | |||
| PLN02578 | 354 | PLN02578, PLN02578, hydrolase | 9e-44 | |
| PLN02824 | 294 | PLN02824, PLN02824, hydrolase, alpha/beta fold fam | 3e-33 | |
| PLN02679 | 360 | PLN02679, PLN02679, hydrolase, alpha/beta fold fam | 1e-22 | |
| COG0596 | 282 | COG0596, MhpC, Predicted hydrolases or acyltransfe | 2e-22 | |
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 1e-18 | |
| TIGR03695 | 252 | TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cy | 2e-10 | |
| pfam00561 | 226 | pfam00561, Abhydrolase_1, alpha/beta hydrolase fol | 6e-09 | |
| COG2267 | 298 | COG2267, PldB, Lysophospholipase [Lipid metabolism | 7e-09 | |
| TIGR02427 | 251 | TIGR02427, protocat_pcaD, 3-oxoadipate enol-lacton | 2e-07 | |
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 3e-07 | |
| PLN03084 | 383 | PLN03084, PLN03084, alpha/beta hydrolase fold prot | 5e-06 | |
| pfam12695 | 145 | pfam12695, Abhydrolase_5, Alpha/beta hydrolase fam | 6e-06 | |
| TIGR01738 | 245 | TIGR01738, bioH, pimelyl-[acyl-carrier protein] me | 7e-05 | |
| PLN02894 | 402 | PLN02894, PLN02894, hydrolase, alpha/beta fold fam | 1e-04 | |
| TIGR03611 | 248 | TIGR03611, RutD, pyrimidine utilization protein D | 7e-04 | |
| TIGR03056 | 278 | TIGR03056, bchO_mg_che_rel, putative magnesium che | 0.003 | |
| PRK14875 | 371 | PRK14875, PRK14875, acetoin dehydrogenase E2 subun | 0.003 |
| >gnl|CDD|215315 PLN02578, PLN02578, hydrolase | Back alignment and domain information |
|---|
Score = 156 bits (396), Expect = 9e-44
Identities = 100/316 (31%), Positives = 144/316 (45%), Gaps = 52/316 (16%)
Query: 138 FWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQG 197
FW W+ +HY G P++ + GFG +FH+ + +L K Y+ +A+D LG
Sbjct: 70 FWTWRGH-KIHYVVQG----EGLPIVLIHGFGASAFHWRYNIPELAKKYKVYALDLLG-- 122
Query: 198 MSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREP 257
+G+ DKA + Y +W+DQV F+KEV++EP
Sbjct: 123 ------------------------FGWSDKAL-----IEYDAMVWRDQVADFVKEVVKEP 153
Query: 258 VYVVGNSLGGFVAVYFAACNPHLVKGVTLLN-ATPFWGFSPNPIRSPKLAR-ILPWSGTF 315
+VGNSLGGF A+ A P LV GV LLN A F S + + +L
Sbjct: 154 AVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVK 213
Query: 316 PLPASVRK-LIEFIWQKISDPESIAEVLKQVYADHATNVDT-VFTRILETTQHPAAAASF 373
PL ++ ++ F++ + P I VLK VY D +NVD + I E P A +
Sbjct: 214 PLKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKD-KSNVDDYLVESITEPAADPNAGEVY 272
Query: 374 ASIM---FAPQGNLSFREALS--RCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPY 428
+M Q + LS C P+ L++G DPWV P ++K P+
Sbjct: 273 YRLMSRFLFNQSRYTLDSLLSKLSC-----PLLLLWGDLDPWVGPAKAEKIKAFYPDTTL 327
Query: 429 YEISPAGHCPHDEVPE 444
+ AGHCPHDEVPE
Sbjct: 328 VNLQ-AGHCPHDEVPE 342
|
Length = 354 |
| >gnl|CDD|178419 PLN02824, PLN02824, hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 126 bits (319), Expect = 3e-33
Identities = 86/320 (26%), Positives = 142/320 (44%), Gaps = 51/320 (15%)
Query: 132 APITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAI 191
+ + W WK +N+ Y++AG P ++ + GFG + H+ K L K +R +AI
Sbjct: 6 PQVETRTWRWK-GYNIRYQRAGTS---GPALVLVHGFGGNADHWRKNTPVLAKSHRVYAI 61
Query: 192 DFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIK 251
D LG G S + P PRS +S Y+ + W +Q+ F
Sbjct: 62 DLLGYGYS---DKPNPRSAPPNSF---------------------YTFETWGEQLNDFCS 97
Query: 252 EVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPW 311
+V+ +P +V+ NS+GG V + A P LV+GV L+N + +R + + PW
Sbjct: 98 DVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINIS---------LRGLHIKK-QPW 147
Query: 312 SGTFPLPASVRKLI------EFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQ 365
G P + + L+ + ++ ++ PE++ +L Q Y D + D + IL
Sbjct: 148 LGR-PFIKAFQNLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGL 206
Query: 366 HPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE 425
P A F + G L E L + P+ + +G++DPW +PV +
Sbjct: 207 EPGAVDVFLDFISYSGGPLP-EELLPAVK---CPVLIAWGEKDPW-EPVELGRAYANFDA 261
Query: 426 APYYEISP-AGHCPHDEVPE 444
+ + P GHCP DE PE
Sbjct: 262 VEDFIVLPGVGHCPQDEAPE 281
|
Length = 294 |
| >gnl|CDD|178283 PLN02679, PLN02679, hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 98.8 bits (246), Expect = 1e-22
Identities = 81/320 (25%), Positives = 144/320 (45%), Gaps = 53/320 (16%)
Query: 139 WEWKPKFNVHY--EKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQ 196
W+WK +++++Y + + + PPVL + GFG H+ + + L K+Y +AID LG
Sbjct: 66 WKWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAKNYTVYAIDLLGF 125
Query: 197 GMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIRE 256
G S D+ P GF +Y+++ W + + F++EV+++
Sbjct: 126 GAS--DKPP-----------------GF-----------SYTMETWAELILDFLEEVVQK 155
Query: 257 PVYVVGNSLGGFVAVYFAA-CNPHLVKGVTLLNATPFWGFSPNPIRSP---KLARILPWS 312
P ++GNS+G V A+ LV+G+ LLN G + + KL L W
Sbjct: 156 PTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAG--GMNNKAVVDDWRIKLLLPLLWL 213
Query: 313 GTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAAS 372
F L R + ++ ++ +++ +L VY + D + I A +
Sbjct: 214 IDFLLKQ--RGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDA 271
Query: 373 FASIMFAPQG--NLSFREALSRCQMNGVPICLIYGKEDPWVK---PV--WGLQVKRQVPE 425
F SI+ P G + +S +PI +++G +DP+ PV + + Q+P
Sbjct: 272 FVSIVTGPPGPNPIKLIPRIS------LPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPN 325
Query: 426 APYYEISPAGHCPHDEVPEV 445
Y + GHCPHD+ P++
Sbjct: 326 VTLYVLEGVGHCPHDDRPDL 345
|
Length = 360 |
| >gnl|CDD|223669 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 96.6 bits (239), Expect = 2e-22
Identities = 68/311 (21%), Positives = 103/311 (33%), Gaps = 48/311 (15%)
Query: 145 FNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK---DYRAWAIDFLGQGMSLP 201
+ Y +AG PP++ L GF S + K L YR A D G G S P
Sbjct: 10 VRLAYREAGGGG---PPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSDP 66
Query: 202 DEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVV 261
YS+ + D + + + E V +V
Sbjct: 67 A---------------------------------GYSLSAYADDLAALLDALGLEKVVLV 93
Query: 262 GNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASV 321
G+S+GG VA+ A +P V+G+ L+ P G +R P A L L
Sbjct: 94 GHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDA 153
Query: 322 RKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQ 381
+ A A + + A + A +
Sbjct: 154 AAFAALLAALGLLAALAAAARA--GLAEALRAPLLGAAAAAFARAARADLAAALLALLD- 210
Query: 382 GNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP-EAPYYEISPAGHCPHD 440
R+ + VP +I+G++DP V ++ +P +A I AGH PH
Sbjct: 211 -----RDLRAALARITVPTLIIHGEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPHL 265
Query: 441 EVPEVCSLCLL 451
E PE + LL
Sbjct: 266 EAPEAFAAALL 276
|
Length = 282 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 83.2 bits (206), Expect = 1e-18
Identities = 30/130 (23%), Positives = 45/130 (34%), Gaps = 30/130 (23%)
Query: 162 VLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFL 221
V+ L G G + + + L YR A D G G S
Sbjct: 1 VVLLHGAGGSAESWRPLAEALAAGYRVLAPDLPGHGDS---------------------- 38
Query: 222 WGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLV 281
YS++ + + + PV +VG+SLGG VA+ AA P V
Sbjct: 39 --------DGPPRTPYSLEDDAADLAALLDALGLGPVVLVGHSLGGAVALAAAARRPERV 90
Query: 282 KGVTLLNATP 291
G+ L++
Sbjct: 91 AGLVLISPPL 100
|
This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
| >gnl|CDD|234315 TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Score = 60.7 bits (148), Expect = 2e-10
Identities = 68/315 (21%), Positives = 115/315 (36%), Gaps = 102/315 (32%)
Query: 158 NSPPVLFLPGFGVGSFH-YEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTE 216
P ++FL GF +GS ++ ++ LG +R AID G G S D
Sbjct: 1 AKPVLVFLHGF-LGSGADWQALIELLGPHFRCLAIDLPGHGSSQSPSDIER--------- 50
Query: 217 EKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAAC 276
+ F + AQ + L + + EP ++VG S+GG +A+Y+A
Sbjct: 51 -----YDFEEIAQLLLATLLDQLGI--------------EPFFLVGYSMGGRIALYYALQ 91
Query: 277 NPHLVKGVTLLNATPFWGFSPNPIRSP--KLARILP---WSGTF---------------P 316
P V+G+ L + +P G + + + AR + F P
Sbjct: 92 YPERVQGLILESGSP--G-----LATEEERAARRQNDEQLAQRFEQEGIEAFLDDWYQQP 144
Query: 317 LPASVRKLIEFIWQKI------SDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAA 370
L AS + L Q + ++PE +A++L R + P
Sbjct: 145 LFASQKNLPPEQRQALRAKRLANNPEGLAKML----------------RATGLGKQP--- 185
Query: 371 ASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPV-WGLQVKRQVPEAPYY 429
S L ++ P+ + G++D K V ++++ +P
Sbjct: 186 --------------SLWPKLQALKI---PVLYLCGEKD--EKFVQIAKEMQKLIPNLTLV 226
Query: 430 EISPAGHCPHDEVPE 444
I+ AGH H E PE
Sbjct: 227 IIANAGHNIHLENPE 241
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]. Length = 252 |
| >gnl|CDD|201306 pfam00561, Abhydrolase_1, alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Score = 56.0 bits (135), Expect = 6e-09
Identities = 47/223 (21%), Positives = 82/223 (36%), Gaps = 15/223 (6%)
Query: 223 GFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVK 282
GFG ++ P Y D + + + + + V +VG+S+GG +A+ +AA P VK
Sbjct: 10 GFG-RSSPPKDFADYRFDDLAEDLEALLDALGLDKVNLVGHSMGGLIALAYAAKYPDRVK 68
Query: 283 GVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVL 342
+ L+ T +P+ L F + +E + +
Sbjct: 69 ALVLVG-TVHPAGLSSPLTPRGNLLGLLLDNFF---NRLYDSVEALL---------GRAI 115
Query: 343 KQVYADHATNV-DTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPIC 401
KQ A V D + L + + ++ G + + + VP
Sbjct: 116 KQFQALGRPFVSDFLKQFELSSLIRFGETLALDGLLGYALGYDLVWDRSAALKDIDVPTL 175
Query: 402 LIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPE 444
+I+G +DP V P ++ P A I AGH E P+
Sbjct: 176 IIWGDDDPLVPPDASEKLAALFPNAQLVVIDDAGHLAQLEKPD 218
|
This catalytic domain is found in a very wide range of enzymes. Length = 226 |
| >gnl|CDD|225176 COG2267, PldB, Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 56.6 bits (137), Expect = 7e-09
Identities = 51/299 (17%), Positives = 87/299 (29%), Gaps = 79/299 (26%)
Query: 162 VLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNF 220
V+ + G G S YE+ DL + + +A+D G G S + S
Sbjct: 37 VVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDS----------- 85
Query: 221 LWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI----REPVYVVGNSLGGFVAVYFAAC 276
+ D + F++ + PV+++G+S+GG +A+ + A
Sbjct: 86 ------------------FADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLAR 127
Query: 277 NPHLVKGVTLLN-----ATPFWGFSPNPIRSPKLARILP------WSGTFPLPASVRKLI 325
P + G+ L + + L RI P L + +
Sbjct: 128 YPPRIDGLVLSSPALGLGGAILRLILARLALKLLGRIRPKLPVDSNLLEGVLTDDLSRDP 187
Query: 326 EFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLS 385
+ +DP VD A A
Sbjct: 188 AEVAAYEADPLIGVGGPVSR------WVDLALLAGRVPALRDAPAI-------------- 227
Query: 386 FREALSRCQMNGVPICLIYGKEDPWVKPVWGLQV---KRQVPEAPYYEISPAGHCPHDE 441
+P+ L+ G +D V V GL + P+ I A H +E
Sbjct: 228 -----------ALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNE 275
|
Length = 298 |
| >gnl|CDD|131480 TIGR02427, protocat_pcaD, 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Score = 51.6 bits (124), Expect = 2e-07
Identities = 70/315 (22%), Positives = 99/315 (31%), Gaps = 91/315 (28%)
Query: 147 VHYEKAGCENVNSPPVLFLPGFGVGSFH-YEKQLKDLGKDYRAWAIDFLGQGMSLPDEDP 205
+HY G + +P ++F+ G ++ L L D+R D G G+S E P
Sbjct: 2 LHYRLDGAAD-GAPVLVFINSLGT-DLRMWDPVLPALTPDFRVLRYDKRGHGLSDAPEGP 59
Query: 206 TPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSL 265
YS++ D V + + E G SL
Sbjct: 60 -------------------------------YSIEDLADDVLALLDHLGIERAVFCGLSL 88
Query: 266 GGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLI 325
GG +A AA P V+ + L N
Sbjct: 89 GGLIAQGLAARRPDRVRALVLSNTAA---------------------------------- 114
Query: 326 EFIWQKISDPESIAEVLKQVYADH-ATNVDTVFTRILE---TTQHPAAAASFASIMFA-- 379
KI PES + V A+ A D V R HPA + +++
Sbjct: 115 -----KIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHPARLDLYRNMLVRQP 169
Query: 380 PQG---------NLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYE 430
P G + FR+ L VP I G +D P ++ VP A + E
Sbjct: 170 PDGYAGCCAAIRDADFRDRLGAIA---VPTLCIAGDQDGSTPPELVREIADLVPGARFAE 226
Query: 431 ISPAGHCPHDEVPEV 445
I AGH P E PE
Sbjct: 227 IRGAGHIPCVEQPEA 241
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate [Energy metabolism, Other]. Length = 251 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 3e-07
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 353 VDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVK 412
+ + E AAA +++ A + REAL+R VP+ +I+G++DP V
Sbjct: 96 ISPPLRDLEELLAADAAA--LLALLRAALLDADLREALARLT---VPVLVIHGEDDPLVP 150
Query: 413 PVWGLQVKRQVPEAPYYEISPAGHCPHDEVPE 444
P ++ +P A + AGH PH E PE
Sbjct: 151 PEAARRLAEALPGAELVVLPGAGHLPHLEHPE 182
|
This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
| >gnl|CDD|178633 PLN03084, PLN03084, alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Score = 48.0 bits (114), Expect = 5e-06
Identities = 37/133 (27%), Positives = 57/133 (42%), Gaps = 27/133 (20%)
Query: 156 NVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDST 215
+ N+PPVL + GF ++ Y K L L K+Y A A D+LG
Sbjct: 124 SNNNPPVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLG-------------------- 163
Query: 216 EEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAA 275
+GF DK QP Y++D + + I E+ + V +V V +A+
Sbjct: 164 ------FGFSDKPQP-GYGFNYTLDEYVSSLESLIDELKSDKVSLVVQGYFSPPVVKYAS 216
Query: 276 CNPHLVKGVTLLN 288
+P +K + LLN
Sbjct: 217 AHPDKIKKLILLN 229
|
Length = 383 |
| >gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 6e-06
Identities = 30/136 (22%), Positives = 43/136 (31%), Gaps = 44/136 (32%)
Query: 161 PVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKN 219
V+ L G G Y + L + Y A+D+ G G SL
Sbjct: 1 LVVLLHGAGGDPEAYAPLARALASRGYNVVAVDYPGHGASL------------------- 41
Query: 220 FLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACN 277
P A + + E + +VG+SLGG VA+ AA +
Sbjct: 42 --------GAPDAEA--------------VLADAPLDPERIVLVGHSLGGGVALLLAARD 79
Query: 278 PHLVKGVTLLNATPFW 293
P + V L P
Sbjct: 80 PRVKAAVVLAAGDPPD 95
|
This family contains a diverse range of alpha/beta hydrolase enzymes. Length = 145 |
| >gnl|CDD|130799 TIGR01738, bioH, pimelyl-[acyl-carrier protein] methyl ester esterase | Back alignment and domain information |
|---|
Score = 43.7 bits (103), Expect = 7e-05
Identities = 44/221 (19%), Positives = 69/221 (31%), Gaps = 32/221 (14%)
Query: 221 LWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHL 280
L G G LA + + I +P +G SLGG VA++ AA +P
Sbjct: 38 LPGHGRSRGFGPLSLADAAEA--------IAAQAPDPAIWLGWSLGGLVALHIAATHPDR 89
Query: 281 VKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAE 340
V+ + + + SP + +P L F Q D + E
Sbjct: 90 VRALVTVAS------------SPCFSA----REDWPEGIKPDVLTGFQQQLSDDYQRTIE 133
Query: 341 VLKQVYADHATNVDTVFTRILETTQH---PAAAASFASIMFAPQGNLSFREALSRCQMNG 397
+ + +T P A + +L R+ L Q
Sbjct: 134 RFLALQTLGTPTARQDARALKQTLLARPTPNVQVLQAGLEILATVDL--RQPL---QNIS 188
Query: 398 VPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCP 438
VP +YG D V + + P + Y + A H P
Sbjct: 189 VPFLRLYGYLDGLVPAKVVPYLDKLAPHSELYIFAKAAHAP 229
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (Pfam model pfam00561). Members of this family are restricted to the Proteobacteria [Biosynthesis of cofactors, prosthetic groups, and carriers, Biotin]. Length = 245 |
| >gnl|CDD|215484 PLN02894, PLN02894, hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 44.1 bits (104), Expect = 1e-04
Identities = 58/301 (19%), Positives = 107/301 (35%), Gaps = 62/301 (20%)
Query: 158 NSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEE 217
++P ++ + G+G + + L +R AID LG G S P K + TE
Sbjct: 104 DAPTLVMVHGYGASQGFFFRNFDALASRFRVIAIDQLGWGGS---SRPDFTCKSTEETEA 160
Query: 218 KNFLWGFGDKAQPW--ASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAA 275
W F D + W A L+ + ++G+S GG+VA +A
Sbjct: 161 ----W-FIDSFEEWRKAKNLSNFI--------------------LLGHSFGGYVAAKYAL 195
Query: 276 CNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDP 335
+P V+ + L+ GFS + + + T+ ++ +W+ P
Sbjct: 196 KHPEHVQHLILVGPA---GFSSESDDKSE--WLTKFRATWK-----GAVLNHLWESNFTP 245
Query: 336 ESIAE---------VLKQV---YADHATNV------DTVFTR-ILETTQHPAAAASFASI 376
+ I V + + H+T + T + T A+
Sbjct: 246 QKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKY 305
Query: 377 MFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISP-AG 435
+F+ G + + L VP IYG+ D W+ ++ ++++ P G
Sbjct: 306 IFSF-GAFARKPLLESASEWKVPTTFIYGRHD-WMNYEGAVEARKRMKVPCEIIRVPQGG 363
Query: 436 H 436
H
Sbjct: 364 H 364
|
Length = 402 |
| >gnl|CDD|211851 TIGR03611, RutD, pyrimidine utilization protein D | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 7e-04
Identities = 38/153 (24%), Positives = 56/153 (36%), Gaps = 36/153 (23%)
Query: 148 HYEKAGCENVNSPPVLFLPGFGVGSFHY-EKQLKDLGKDYRAWAIDFLGQGMSLPDEDPT 206
HYE G + ++P V+ G G GS Y QL L + + D G G S P E P
Sbjct: 1 HYELHGPPDADAPVVVLSSGLG-GSGSYWAPQLAVLTQRFHVVTYDHRGTGRS-PGELPP 58
Query: 207 PRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLG 266
YS+ D V + + E + VG++LG
Sbjct: 59 -----------------------------DYSIAHMADDVLQLLDALGIERFHFVGHALG 89
Query: 267 GFVAVYFAACNPHLVKGVTLLNATPFWGFSPNP 299
G + + A P + + L+N W P+P
Sbjct: 90 GLIGLQLALDYPERLTSLVLING---WS-RPDP 118
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. Length = 248 |
| >gnl|CDD|132100 TIGR03056, bchO_mg_che_rel, putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Score = 39.1 bits (91), Expect = 0.003
Identities = 66/298 (22%), Positives = 109/298 (36%), Gaps = 58/298 (19%)
Query: 160 PPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKN 219
P +L L G G + + + L + +R A D G G + R+
Sbjct: 29 PLLLLLHGTGASTHSWRDLMPPLARSFRVVAPDLPGHGFT--------RA---------P 71
Query: 220 FLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPH 279
F + F + + DL +C E + P V+G+S G +A+ A P
Sbjct: 72 FRFRFTLPSM--------AEDLSA--LCA--AEGLS-PDGVIGHSAGAAIALRLALDGPV 118
Query: 280 LVKGVTLLNAT--PFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPES 337
+ V +NA PF +A L FP A V F +S +
Sbjct: 119 TPRMVVGINAALMPF----------EGMAGTL-----FPYMARVLACNPFTPPMMSRGAA 163
Query: 338 IAEVLKQVYADHATNVD----TVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRC 393
+ ++++ D + +D T + R++ + H A S M A L R
Sbjct: 164 DQQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALS----MMAQWDLAPLNRDLPRI 219
Query: 394 QMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCLL 451
+P+ LI G+ED V P + +VP A + + GH H+E + +L
Sbjct: 220 T---IPLHLIAGEEDKAVPPDESKRAATRVPTATLHVVPGGGHLVHEEQADGVVGLIL 274
|
Members of this family belong to the alpha/beta fold family hydrolases (pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity [Energy metabolism, Photosynthesis]. Length = 278 |
| >gnl|CDD|184875 PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.003
Identities = 34/147 (23%), Positives = 51/147 (34%), Gaps = 43/147 (29%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGS-----FHYEKQLKDLGKDYRAWAIDFLGQGMSL 200
V Y + G + PV+ + GFG G F++ L A+D G G S
Sbjct: 120 TVRYLRLGEGD--GTPVVLIHGFG-GDLNNWLFNHA----ALAAGRPVIALDLPGHGASS 172
Query: 201 PDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYV 260
S+D V F+ + E ++
Sbjct: 173 KAVGAG-------------------------------SLDELAAAVLAFLDALGIERAHL 201
Query: 261 VGNSLGGFVAVYFAACNPHLVKGVTLL 287
VG+S+GG VA+ AA P V +TL+
Sbjct: 202 VGHSMGGAVALRLAARAPQRVASLTLI 228
|
Length = 371 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 451 | |||
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 100.0 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 100.0 | |
| PLN02578 | 354 | hydrolase | 100.0 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 100.0 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 100.0 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 99.98 | |
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 99.98 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 99.98 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 99.98 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 99.97 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 99.97 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 99.97 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 99.97 | |
| PLN02965 | 255 | Probable pheophorbidase | 99.97 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 99.97 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 99.97 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 99.97 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 99.97 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 99.96 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 99.96 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 99.96 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 99.96 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.96 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 99.96 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 99.96 | |
| PRK07581 | 339 | hypothetical protein; Validated | 99.96 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 99.96 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 99.96 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 99.96 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 99.96 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 99.95 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 99.95 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 99.95 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.95 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.95 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.95 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.94 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.93 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 99.93 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 99.92 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.92 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 99.91 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 99.9 | |
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 99.9 | |
| PLN02511 | 388 | hydrolase | 99.9 | |
| KOG2984 | 277 | consensus Predicted hydrolase [General function pr | 99.9 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.89 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 99.88 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 99.88 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 99.86 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.86 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.86 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.85 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.84 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.84 | |
| PRK10566 | 249 | esterase; Provisional | 99.81 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 99.81 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.81 | |
| KOG1552 | 258 | consensus Predicted alpha/beta hydrolase [General | 99.8 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 99.78 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.78 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 99.77 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.75 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 99.72 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 99.69 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 99.68 | |
| KOG4391 | 300 | consensus Predicted alpha/beta hydrolase BEM46 [Ge | 99.67 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.67 | |
| KOG2624 | 403 | consensus Triglyceride lipase-cholesterol esterase | 99.67 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.65 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 99.63 | |
| KOG2931 | 326 | consensus Differentiation-related gene 1 protein ( | 99.63 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.62 | |
| KOG4667 | 269 | consensus Predicted esterase [Lipid transport and | 99.6 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.58 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 99.58 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 99.55 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 99.54 | |
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 99.54 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 99.53 | |
| PLN00021 | 313 | chlorophyllase | 99.51 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 99.49 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.49 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 99.47 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 99.47 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 99.46 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 99.43 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 99.43 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 99.43 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 99.43 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 99.43 | |
| KOG2565 | 469 | consensus Predicted hydrolases or acyltransferases | 99.42 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 99.39 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 99.38 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.37 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 99.35 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 99.35 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 99.3 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 99.28 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 99.24 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 99.24 | |
| PRK10115 | 686 | protease 2; Provisional | 99.24 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 99.23 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 99.22 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 99.2 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 99.19 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 99.17 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 99.15 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 99.06 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 99.06 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 99.02 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 98.99 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 98.99 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 98.94 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 98.93 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 98.92 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 98.89 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 98.86 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 98.86 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 98.85 | |
| KOG2551 | 230 | consensus Phospholipase/carboxyhydrolase [Amino ac | 98.75 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 98.74 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 98.7 | |
| KOG4627 | 270 | consensus Kynurenine formamidase [Amino acid trans | 98.66 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 98.65 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 98.63 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 98.63 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 98.6 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 98.6 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 98.59 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 98.58 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 98.57 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 98.56 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 98.55 | |
| KOG1553 | 517 | consensus Predicted alpha/beta hydrolase BAT5 [Gen | 98.52 | |
| KOG2112 | 206 | consensus Lysophospholipase [Lipid transport and m | 98.52 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 98.49 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 98.47 | |
| KOG3043 | 242 | consensus Predicted hydrolase related to dienelact | 98.47 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 98.47 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 98.46 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 98.44 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 98.44 | |
| KOG2281 | 867 | consensus Dipeptidyl aminopeptidases/acylaminoacyl | 98.43 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 98.36 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 98.33 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 98.32 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 98.3 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 98.24 | |
| PF04301 | 213 | DUF452: Protein of unknown function (DUF452); Inte | 98.23 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 98.12 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 97.99 | |
| KOG4840 | 299 | consensus Predicted hydrolases or acyltransferases | 97.95 | |
| KOG3101 | 283 | consensus Esterase D [General function prediction | 97.91 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 97.88 | |
| KOG3253 | 784 | consensus Predicted alpha/beta hydrolase [General | 97.88 | |
| KOG3847 | 399 | consensus Phospholipase A2 (platelet-activating fa | 97.83 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 97.76 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 97.76 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 97.7 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 97.7 | |
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 97.65 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 97.61 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 97.59 | |
| KOG3724 | 973 | consensus Negative regulator of COPII vesicle form | 97.51 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 97.51 | |
| PLN02209 | 437 | serine carboxypeptidase | 97.48 | |
| COG3150 | 191 | Predicted esterase [General function prediction on | 97.45 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 97.44 | |
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 97.36 | |
| KOG2541 | 296 | consensus Palmitoyl protein thioesterase [Lipid tr | 97.32 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 97.31 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 97.29 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 97.23 | |
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 97.2 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 97.18 | |
| KOG1551 | 371 | consensus Uncharacterized conserved protein [Funct | 97.15 | |
| KOG2183 | 492 | consensus Prolylcarboxypeptidase (angiotensinase C | 97.15 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 97.09 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 96.94 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 96.85 | |
| PF11144 | 403 | DUF2920: Protein of unknown function (DUF2920); In | 96.84 | |
| COG4553 | 415 | DepA Poly-beta-hydroxyalkanoate depolymerase [Lipi | 96.75 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 96.67 | |
| COG2382 | 299 | Fes Enterochelin esterase and related enzymes [Ino | 96.57 | |
| PF04083 | 63 | Abhydro_lipase: Partial alpha/beta-hydrolase lipas | 96.49 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 96.49 | |
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 96.46 | |
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 96.43 | |
| KOG2237 | 712 | consensus Predicted serine protease [Posttranslati | 96.41 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 96.33 | |
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 96.3 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 96.25 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 96.23 | |
| COG2939 | 498 | Carboxypeptidase C (cathepsin A) [Amino acid trans | 96.19 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 96.15 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 96.01 | |
| PF05576 | 448 | Peptidase_S37: PS-10 peptidase S37; InterPro: IPR0 | 95.91 | |
| PF06441 | 112 | EHN: Epoxide hydrolase N terminus; InterPro: IPR01 | 95.72 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 95.66 | |
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 95.58 | |
| KOG3967 | 297 | consensus Uncharacterized conserved protein [Funct | 95.56 | |
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 95.5 | |
| KOG2182 | 514 | consensus Hydrolytic enzymes of the alpha/beta hyd | 95.38 | |
| COG3946 | 456 | VirJ Type IV secretory pathway, VirJ component [In | 95.0 | |
| KOG2369 | 473 | consensus Lecithin:cholesterol acyltransferase (LC | 94.92 | |
| cd00519 | 229 | Lipase_3 Lipase (class 3). Lipases are esterases t | 94.81 | |
| PLN02162 | 475 | triacylglycerol lipase | 94.4 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 94.27 | |
| PLN00413 | 479 | triacylglycerol lipase | 93.93 | |
| PLN02454 | 414 | triacylglycerol lipase | 93.92 | |
| PLN02571 | 413 | triacylglycerol lipase | 93.9 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 93.63 | |
| COG4287 | 507 | PqaA PhoPQ-activated pathogenicity-related protein | 93.35 | |
| PLN02408 | 365 | phospholipase A1 | 93.13 | |
| COG2830 | 214 | Uncharacterized protein conserved in bacteria [Fun | 93.04 | |
| COG4947 | 227 | Uncharacterized protein conserved in bacteria [Fun | 92.86 | |
| PLN02934 | 515 | triacylglycerol lipase | 92.44 | |
| PF01083 | 179 | Cutinase: Cutinase; InterPro: IPR000675 Aerial pla | 92.27 | |
| PLN02324 | 415 | triacylglycerol lipase | 92.18 | |
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 91.92 | |
| PLN02802 | 509 | triacylglycerol lipase | 91.62 | |
| PLN02310 | 405 | triacylglycerol lipase | 91.4 | |
| KOG4372 | 405 | consensus Predicted alpha/beta hydrolase [General | 91.21 | |
| PF05277 | 345 | DUF726: Protein of unknown function (DUF726); Inte | 91.05 | |
| PLN02753 | 531 | triacylglycerol lipase | 91.04 | |
| PLN02719 | 518 | triacylglycerol lipase | 90.16 | |
| PLN03037 | 525 | lipase class 3 family protein; Provisional | 90.08 | |
| PLN02761 | 527 | lipase class 3 family protein | 90.06 | |
| KOG1516 | 545 | consensus Carboxylesterase and related proteins [G | 88.45 | |
| PLN02847 | 633 | triacylglycerol lipase | 87.95 | |
| KOG4569 | 336 | consensus Predicted lipase [Lipid transport and me | 87.09 |
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=269.81 Aligned_cols=279 Identities=25% Similarity=0.481 Sum_probs=185.6
Q ss_pred CCccceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCC
Q 013006 133 PITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEG 212 (451)
Q Consensus 133 ~~~~~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~ 212 (451)
+++.+++++ +|.+++|...|+ ++++|||+||+++++..|..+++.|++.++|+++|+||||.|+.+....
T Consensus 7 ~~~~~~~~~-~~~~i~y~~~G~---~~~~vlllHG~~~~~~~w~~~~~~L~~~~~vi~~DlpG~G~S~~~~~~~------ 76 (294)
T PLN02824 7 QVETRTWRW-KGYNIRYQRAGT---SGPALVLVHGFGGNADHWRKNTPVLAKSHRVYAIDLLGYGYSDKPNPRS------ 76 (294)
T ss_pred CCCCceEEE-cCeEEEEEEcCC---CCCeEEEECCCCCChhHHHHHHHHHHhCCeEEEEcCCCCCCCCCCcccc------
Confidence 466677776 589999999985 3589999999999999999999999988999999999999997543110
Q ss_pred CchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCC
Q 013006 213 DSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPF 292 (451)
Q Consensus 213 ~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~ 292 (451)
......|+++++++|+.+++++++.++++||||||||++++.+|.++|++|+++|++++.+.
T Consensus 77 ------------------~~~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~ 138 (294)
T PLN02824 77 ------------------APPNSFYTFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLR 138 (294)
T ss_pred ------------------ccccccCCHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcc
Confidence 00001289999999999999999999999999999999999999999999999999998542
Q ss_pred CCCCCC-CCC-chHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHH
Q 013006 293 WGFSPN-PIR-SPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAA 370 (451)
Q Consensus 293 ~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (451)
...... +.. .+....+..+... ......++........+...+...+.......+.....+......+...
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (294)
T PLN02824 139 GLHIKKQPWLGRPFIKAFQNLLRE-------TAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAV 211 (294)
T ss_pred cccccccchhhhHHHHHHHHHHhc-------hhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHH
Confidence 110000 000 0000000000000 0000111111222222333333333332222223333332222222222
Q ss_pred HHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 371 ASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
..+...+.. ... ......+.++++|+|+|+|++|.+++.+.++.+.+..+++++++++++||++++|+|++|++.|
T Consensus 212 ~~~~~~~~~-~~~---~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i 287 (294)
T PLN02824 212 DVFLDFISY-SGG---PLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLI 287 (294)
T ss_pred HHHHHHhcc-ccc---cchHHHHhhcCCCeEEEEecCCCCCChHHHHHHHhcCCccceEEeCCCCCChhhhCHHHHHHHH
Confidence 222222211 111 1122446788999999999999999999999998888889999999999999999999999876
|
|
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=270.88 Aligned_cols=280 Identities=25% Similarity=0.501 Sum_probs=179.8
Q ss_pred cceeeecCCeEEEEeecCCC--CCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013006 136 SCFWEWKPKFNVHYEKAGCE--NVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGD 213 (451)
Q Consensus 136 ~~~~~~~~g~~l~y~~~g~~--~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~ 213 (451)
..+|.+.+..+++|.+.|++ .+.+|+|||+||++.+...|..++..|+++|+|+++|+||||.|+.+...
T Consensus 63 ~~~~~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~-------- 134 (360)
T PLN02679 63 CKKWKWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAKNYTVYAIDLLGFGASDKPPGF-------- 134 (360)
T ss_pred CceEEECCceeEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCCCc--------
Confidence 34566665559999999853 11358999999999999999999999998999999999999999754321
Q ss_pred chhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHh-CCCccceEEEeccCCC
Q 013006 214 STEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAAC-NPHLVKGVTLLNATPF 292 (451)
Q Consensus 214 ~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~-~P~~v~~lvl~~~~~~ 292 (451)
.|+++++++++.+++++++.++++||||||||.+++.+|.. +|++|+++|++++.+.
T Consensus 135 ----------------------~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~ 192 (360)
T PLN02679 135 ----------------------SYTMETWAELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGG 192 (360)
T ss_pred ----------------------cccHHHHHHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccc
Confidence 17999999999999999999999999999999999998874 7999999999998642
Q ss_pred CCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHH
Q 013006 293 WGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAAS 372 (451)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (451)
..... ................+..-.........++........+...+...+.......+.....+......+.....
T Consensus 193 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (360)
T PLN02679 193 MNNKA-VVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDA 271 (360)
T ss_pred ccccc-ccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHH
Confidence 11100 00000000000000000000000000111111111222233333333332222222333332222222223333
Q ss_pred HHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHH-----HHHHHHHCCCCcEEEeCCCCCCccccChHHHH
Q 013006 373 FASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVW-----GLQVKRQVPEAPYYEISPAGHCPHDEVPEVCS 447 (451)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~-----~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~ 447 (451)
+........ . .+....+.++++|||+|+|++|+++|++. .+++.+.+|++++++++++||++++|+|++++
T Consensus 272 ~~~~~~~~~-~---~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~ 347 (360)
T PLN02679 272 FVSIVTGPP-G---PNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVH 347 (360)
T ss_pred HHHHHhcCC-C---CCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHHHH
Confidence 333322111 1 12234567789999999999999999863 34567778999999999999999999999999
Q ss_pred hhh
Q 013006 448 LCL 450 (451)
Q Consensus 448 ~~I 450 (451)
+.|
T Consensus 348 ~~I 350 (360)
T PLN02679 348 EKL 350 (360)
T ss_pred HHH
Confidence 876
|
|
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-32 Score=266.11 Aligned_cols=274 Identities=34% Similarity=0.623 Sum_probs=181.7
Q ss_pred ceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchh
Q 013006 137 CFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTE 216 (451)
Q Consensus 137 ~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~ 216 (451)
.+|++. |.+++|...| ++++|||+||++++...|..+++.|+++|+|+++|+||||.|+.+..
T Consensus 69 ~~~~~~-~~~i~Y~~~g----~g~~vvliHG~~~~~~~w~~~~~~l~~~~~v~~~D~~G~G~S~~~~~------------ 131 (354)
T PLN02578 69 NFWTWR-GHKIHYVVQG----EGLPIVLIHGFGASAFHWRYNIPELAKKYKVYALDLLGFGWSDKALI------------ 131 (354)
T ss_pred eEEEEC-CEEEEEEEcC----CCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCccc------------
Confidence 455554 7999999988 46889999999999999999999999899999999999999975432
Q ss_pred hhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCC
Q 013006 217 EKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFS 296 (451)
Q Consensus 217 ~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~ 296 (451)
.|+.+.+++++.++++++..++++++||||||++++.+|.++|++|+++|++++.+.+...
T Consensus 132 -------------------~~~~~~~a~~l~~~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~ 192 (354)
T PLN02578 132 -------------------EYDAMVWRDQVADFVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSE 192 (354)
T ss_pred -------------------ccCHHHHHHHHHHHHHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCcccccc
Confidence 2799999999999999999999999999999999999999999999999999987543322
Q ss_pred CCCCCchH--HhhhcCCCCCCCChHHHHHHHH-HHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHH
Q 013006 297 PNPIRSPK--LARILPWSGTFPLPASVRKLIE-FIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASF 373 (451)
Q Consensus 297 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (451)
........ ...........+.......... ........+..+.......+.......+.....+......+.....+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (354)
T PLN02578 193 SREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVY 272 (354)
T ss_pred ccccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHH
Confidence 21100000 0000000000000001111100 01111122333333333333322222222222222222233222222
Q ss_pred HHHHhc---CCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 374 ASIMFA---PQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 374 ~~~~~~---~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
...+.. ..... +..+.+.++++|+++|+|++|.+++.+.++++++.+|+++++++ ++||++++|+|+++++.|
T Consensus 273 ~~~~~~~~~~~~~~---~~~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p~a~l~~i-~~GH~~~~e~p~~~~~~I 348 (354)
T PLN02578 273 YRLMSRFLFNQSRY---TLDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYPDTTLVNL-QAGHCPHDEVPEQVNKAL 348 (354)
T ss_pred HHHHHHHhcCCCCC---CHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEe-CCCCCccccCHHHHHHHH
Confidence 222111 11111 22344678999999999999999999999999999999999999 689999999999999886
|
|
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-31 Score=253.35 Aligned_cols=257 Identities=16% Similarity=0.149 Sum_probs=167.3
Q ss_pred cCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhcc
Q 013006 142 KPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFL 221 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~ 221 (451)
.+|.+++|...| ++++|||+||++++...|..+++.|++.++|+++|+||||.|+.+...
T Consensus 14 ~~g~~i~y~~~G----~g~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~---------------- 73 (295)
T PRK03592 14 VLGSRMAYIETG----EGDPIVFLHGNPTSSYLWRNIIPHLAGLGRCLAPDLIGMGASDKPDID---------------- 73 (295)
T ss_pred ECCEEEEEEEeC----CCCEEEEECCCCCCHHHHHHHHHHHhhCCEEEEEcCCCCCCCCCCCCC----------------
Confidence 478999999998 368999999999999999999999988889999999999999765321
Q ss_pred ccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCC
Q 013006 222 WGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIR 301 (451)
Q Consensus 222 w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~ 301 (451)
|+++++++|+..++++++.++++++||||||.+++.+|.++|++|+++|++++..........
T Consensus 74 ---------------~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~-- 136 (295)
T PRK03592 74 ---------------YTFADHARYLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDF-- 136 (295)
T ss_pred ---------------CCHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhc--
Confidence 799999999999999999999999999999999999999999999999999974211000000
Q ss_pred chHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHH---HHHHHHHHhhcC--CCChHHHHHHHHhhccChhHHHHHHHH
Q 013006 302 SPKLARILPWSGTFPLPASVRKLIEFIWQKISDPES---IAEVLKQVYADH--ATNVDTVFTRILETTQHPAAAASFASI 376 (451)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (451)
..... .....+......... ...+....+... ....++....+......+........+
T Consensus 137 ~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (295)
T PRK03592 137 PPAVR----------------ELFQALRSPGEGEEMVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSW 200 (295)
T ss_pred chhHH----------------HHHHHHhCcccccccccchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhh
Confidence 00000 000000000000000 000111111100 001112122222222222111111111
Q ss_pred HhcCC--CC-----CchhHHhhhccCCCCCEEEEeeCCCCCCChHHH-HHHHHHCCCCcEEEeCCCCCCccccChHHHHh
Q 013006 377 MFAPQ--GN-----LSFREALSRCQMNGVPICLIYGKEDPWVKPVWG-LQVKRQVPEAPYYEISPAGHCPHDEVPEVCSL 448 (451)
Q Consensus 377 ~~~~~--~~-----~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~-~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~ 448 (451)
..... .. ....+....+.++++|+|+|+|++|.++++... +.+.+..+++++.+++++||++++|+|+++++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~ 280 (295)
T PRK03592 201 PRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGA 280 (295)
T ss_pred hhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhcCHHHHHH
Confidence 11100 00 001122345678999999999999999955444 44556678899999999999999999999998
Q ss_pred hhC
Q 013006 449 CLL 451 (451)
Q Consensus 449 ~Il 451 (451)
.|+
T Consensus 281 ~i~ 283 (295)
T PRK03592 281 AIA 283 (295)
T ss_pred HHH
Confidence 873
|
|
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-31 Score=254.08 Aligned_cols=251 Identities=15% Similarity=0.132 Sum_probs=166.8
Q ss_pred cCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhcc
Q 013006 142 KPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFL 221 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~ 221 (451)
.+|.+++|...+.+ +..++|||+||++++...|..+++.|+++|+|+++|+||||.|+.+..
T Consensus 9 ~~~~~~~~~~~~~~-~~~~plvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~----------------- 70 (276)
T TIGR02240 9 LDGQSIRTAVRPGK-EGLTPLLIFNGIGANLELVFPFIEALDPDLEVIAFDVPGVGGSSTPRH----------------- 70 (276)
T ss_pred cCCcEEEEEEecCC-CCCCcEEEEeCCCcchHHHHHHHHHhccCceEEEECCCCCCCCCCCCC-----------------
Confidence 36889999875322 234799999999999999999999999899999999999999975422
Q ss_pred ccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCC
Q 013006 222 WGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIR 301 (451)
Q Consensus 222 w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~ 301 (451)
.++++++++++.++++++++++++||||||||.+++.+|.++|++|+++|++++.+.....+. .
T Consensus 71 --------------~~~~~~~~~~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~--~ 134 (276)
T TIGR02240 71 --------------PYRFPGLAKLAARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPG--K 134 (276)
T ss_pred --------------cCcHHHHHHHHHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCC--c
Confidence 179999999999999999999999999999999999999999999999999998753111110 0
Q ss_pred chHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCC
Q 013006 302 SPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQ 381 (451)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (451)
........... .... ..........++.......+..................+.......
T Consensus 135 ~~~~~~~~~~~------~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 195 (276)
T TIGR02240 135 PKVLMMMASPR------RYIQ------------PSHGIHIAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGL- 195 (276)
T ss_pred hhHHHHhcCch------hhhc------------cccccchhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHc-
Confidence 00000000000 0000 0000000000111000000011111111111100000011111000
Q ss_pred CCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 382 GNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 382 ~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
. ......+.++++|+|+|+|++|++++++..+++.+.+|+++++++++ ||++++|+|+++++.|
T Consensus 196 -~---~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~~~~~~i~~-gH~~~~e~p~~~~~~i 259 (276)
T TIGR02240 196 -G---WTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPNAELHIIDD-GHLFLITRAEAVAPII 259 (276)
T ss_pred -C---CchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCCCEEEEEcC-CCchhhccHHHHHHHH
Confidence 0 11224467899999999999999999999999999999999999975 9999999999999876
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.5e-30 Score=252.50 Aligned_cols=259 Identities=20% Similarity=0.250 Sum_probs=169.2
Q ss_pred ecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhc
Q 013006 141 WKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNF 220 (451)
Q Consensus 141 ~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~ 220 (451)
..+|.+++|.+.|+. ++++|||+||++.+...|+.+++.|+++|+|+++|+||||.|+.+.....
T Consensus 111 ~~~~~~~~y~~~G~~--~~~~ivllHG~~~~~~~w~~~~~~L~~~~~Via~DlpG~G~S~~p~~~~~------------- 175 (383)
T PLN03084 111 SSDLFRWFCVESGSN--NNPPVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSDKPQPGYG------------- 175 (383)
T ss_pred cCCceEEEEEecCCC--CCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCccccc-------------
Confidence 468999999999964 46899999999999999999999999899999999999999976533110
Q ss_pred cccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCC
Q 013006 221 LWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPI 300 (451)
Q Consensus 221 ~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~ 300 (451)
..|+++++++++..+++++++++++|+|||+||++++.+|.++|++|+++|++++....... .
T Consensus 176 --------------~~ys~~~~a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~---~ 238 (383)
T PLN03084 176 --------------FNYTLDEYVSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHA---K 238 (383)
T ss_pred --------------ccCCHHHHHHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccc---c
Confidence 12799999999999999999999999999999999999999999999999999985321000 0
Q ss_pred CchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhh--cCCCChHHHHHHHHhhccChhH----HHHHH
Q 013006 301 RSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYA--DHATNVDTVFTRILETTQHPAA----AASFA 374 (451)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 374 (451)
....+.. +...+........... .....+. ......++....+......+.. ...+.
T Consensus 239 ~p~~l~~----------------~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~ 301 (383)
T PLN03084 239 LPSTLSE----------------FSNFLLGEIFSQDPLR-ASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAIS 301 (383)
T ss_pred chHHHHH----------------HHHHHhhhhhhcchHH-HHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHH
Confidence 0000000 0000000000000000 0000000 0000111111111111111110 11111
Q ss_pred HHHhcCCCCCchhHHhhh--ccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 375 SIMFAPQGNLSFREALSR--CQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~--l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
..+....... ..+.... ..++++|||+|+|++|.+++.+..+++++. +++++.+++++||++++|+|++++++|
T Consensus 302 r~~~~~l~~~-~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~-~~a~l~vIp~aGH~~~~E~Pe~v~~~I 377 (383)
T PLN03084 302 RSMKKELKKY-IEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVEDFCKS-SQHKLIELPMAGHHVQEDCGEELGGII 377 (383)
T ss_pred HHhhcccchh-hHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHHHHHh-cCCeEEEECCCCCCcchhCHHHHHHHH
Confidence 1111100000 0111111 145799999999999999999988888887 588999999999999999999999987
|
|
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.5e-31 Score=241.97 Aligned_cols=270 Identities=21% Similarity=0.304 Sum_probs=176.8
Q ss_pred CccceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCC
Q 013006 134 ITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEG 212 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~ 212 (451)
++..+++. +|++++|.+.|+. ++|.|||+||++..+.+|+.++..|+. +|+|+++|+||+|.|+.++.-.
T Consensus 22 ~~hk~~~~-~gI~~h~~e~g~~--~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~------ 92 (322)
T KOG4178|consen 22 ISHKFVTY-KGIRLHYVEGGPG--DGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHIS------ 92 (322)
T ss_pred cceeeEEE-ccEEEEEEeecCC--CCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcc------
Confidence 44444444 5699999999874 689999999999999999999999976 4999999999999998776532
Q ss_pred CchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCC
Q 013006 213 DSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPF 292 (451)
Q Consensus 213 ~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~ 292 (451)
.||++.++.|+..+|++|+.++++++||+||+++|+.+|..+|++|+++|+++....
T Consensus 93 -----------------------~Yt~~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~ 149 (322)
T KOG4178|consen 93 -----------------------EYTIDELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFP 149 (322)
T ss_pred -----------------------eeeHHHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCC
Confidence 299999999999999999999999999999999999999999999999999998653
Q ss_pred CCCCCCCCCchHH--hhhc--CC-CCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCC---------------C
Q 013006 293 WGFSPNPIRSPKL--ARIL--PW-SGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHAT---------------N 352 (451)
Q Consensus 293 ~~~~~~~~~~~~~--~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~ 352 (451)
++...+.. ...+ .+ .-.+.-+...+.... ...........+..... .
T Consensus 150 -----~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~ 216 (322)
T KOG4178|consen 150 -----NPKLKPLDSSKAIFGKSYYICLFQEPGKPETELS--------KDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWL 216 (322)
T ss_pred -----CcccchhhhhccccCccceeEeccccCcchhhhc--------cchhHHhHHhhhccccCCccccCCCCCCccchh
Confidence 11111111 0100 00 000111111110000 00000111111110000 0
Q ss_pred hHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChH-HHHHHHHHCCCC-cEEE
Q 013006 353 VDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPV-WGLQVKRQVPEA-PYYE 430 (451)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~-~~~~l~~~lp~~-~~~~ 430 (451)
.++..+.+........ ......+........ ....-.+.++++||++|+|+.|.+.+.. ....+.+.+|+. +.++
T Consensus 217 t~edi~~~~~~f~~~g-~~gplNyyrn~~r~w--~a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv 293 (322)
T KOG4178|consen 217 TEEDIAFYVSKFQIDG-FTGPLNYYRNFRRNW--EAAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVV 293 (322)
T ss_pred hHHHHHHHHhcccccc-ccccchhhHHHhhCc--hhccccccccccceEEEEecCcccccchhHHHHHHHhhccccceEE
Confidence 1122222222221111 111111111111011 0112345788999999999999998765 666777788886 7889
Q ss_pred eCCCCCCccccChHHHHhhhC
Q 013006 431 ISPAGHCPHDEVPEVCSLCLL 451 (451)
Q Consensus 431 i~~~gH~~~~e~p~~v~~~Il 451 (451)
++++||++++|+|++++++|+
T Consensus 294 ~~~~gH~vqqe~p~~v~~~i~ 314 (322)
T KOG4178|consen 294 IEGIGHFVQQEKPQEVNQAIL 314 (322)
T ss_pred ecCCcccccccCHHHHHHHHH
Confidence 999999999999999999874
|
|
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.5e-30 Score=254.87 Aligned_cols=276 Identities=20% Similarity=0.252 Sum_probs=170.2
Q ss_pred eeeecCCeEEEEeecCCCC-CCCCcEEEecCCCCChhcHHH-HHHhhc----CCceEEEEcCCCCCCCCCCCCCCCCCCC
Q 013006 138 FWEWKPKFNVHYEKAGCEN-VNSPPVLFLPGFGVGSFHYEK-QLKDLG----KDYRAWAIDFLGQGMSLPDEDPTPRSKE 211 (451)
Q Consensus 138 ~~~~~~g~~l~y~~~g~~~-~~~p~VlllHG~~~~~~~~~~-~~~~L~----~~~~Vi~~D~rG~G~S~~~~~~~~~~~~ 211 (451)
.|...+|.+++|...|+.+ +.+++|||+||++++...|.. +++.|+ ++|+|+++|+||||.|+.+...
T Consensus 179 ~~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~------ 252 (481)
T PLN03087 179 SWLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADS------ 252 (481)
T ss_pred eeEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCC------
Confidence 3444567999999999864 235899999999999999985 446664 5899999999999999754221
Q ss_pred CCchhhhhccccCCCCCCccccccccCHHHHHHHHH-HHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 212 GDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVC-YFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 212 ~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~-~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
.|+++++++++. .+++++++++++++||||||++++.+|.++|++|+++|++++.
T Consensus 253 ------------------------~ytl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~ 308 (481)
T PLN03087 253 ------------------------LYTLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPP 308 (481)
T ss_pred ------------------------cCCHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCC
Confidence 279999999994 8999999999999999999999999999999999999999975
Q ss_pred CCCCCCCCCCCc-hHH-hhhcCCC--CCCCChHHHHHHHHHHHHhc-----CChHHHHHHHHHHhhcCCCChHHHHHHHH
Q 013006 291 PFWGFSPNPIRS-PKL-ARILPWS--GTFPLPASVRKLIEFIWQKI-----SDPESIAEVLKQVYADHATNVDTVFTRIL 361 (451)
Q Consensus 291 ~~~~~~~~~~~~-~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (451)
.+. .+..... ... ....... .................... ..+ .....+........ ......+.+.
T Consensus 309 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~-~~~~l~~~~~ 384 (481)
T PLN03087 309 YYP--VPKGVQATQYVMRKVAPRRVWPPIAFGASVACWYEHISRTICLVICKNH-RLWEFLTRLLTRNR-MRTFLIEGFF 384 (481)
T ss_pred ccc--cccchhHHHHHHHHhcccccCCccccchhHHHHHHHHHhhhhcccccch-HHHHHHHHHhhhhh-hhHHHHHHHH
Confidence 431 1111000 000 0000000 00000011111100000000 000 01111111111100 0000111111
Q ss_pred hhccChhHHHHHHHHHhcCCCCCchhHHhh-hccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccc
Q 013006 362 ETTQHPAAAASFASIMFAPQGNLSFREALS-RCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHD 440 (451)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~ 440 (451)
... .......+..+..... ....+.+. ...++++|+|+|+|++|.++|++..+.+++.+|++++++++++||++++
T Consensus 385 ~~~-~~~~~~~l~~~i~~~~--~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~a~l~vI~~aGH~~~v 461 (481)
T PLN03087 385 CHT-HNAAWHTLHNIICGSG--SKLDGYLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVPRARVKVIDDKDHITIV 461 (481)
T ss_pred hcc-chhhHHHHHHHHhchh--hhhhhHHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCCCCEEEEeCCCCCcchh
Confidence 100 0111111111111100 00011122 2236899999999999999999999999999999999999999999885
Q ss_pred -cChHHHHhhh
Q 013006 441 -EVPEVCSLCL 450 (451)
Q Consensus 441 -e~p~~v~~~I 450 (451)
|+|+++++.|
T Consensus 462 ~e~p~~fa~~L 472 (481)
T PLN03087 462 VGRQKEFAREL 472 (481)
T ss_pred hcCHHHHHHHH
Confidence 9999999886
|
|
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.7e-30 Score=244.12 Aligned_cols=267 Identities=18% Similarity=0.297 Sum_probs=170.1
Q ss_pred CCCccceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCC
Q 013006 132 APITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKE 211 (451)
Q Consensus 132 ~~~~~~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~ 211 (451)
.++...+++. +|.+++|...| ++++|||+||++.+...|..+++.|.++|+|+++|+||||.|+.+...
T Consensus 12 ~~~~~~~~~~-~~~~i~y~~~G----~~~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~------ 80 (286)
T PRK03204 12 YPFESRWFDS-SRGRIHYIDEG----TGPPILLCHGNPTWSFLYRDIIVALRDRFRCVAPDYLGFGLSERPSGF------ 80 (286)
T ss_pred ccccceEEEc-CCcEEEEEECC----CCCEEEEECCCCccHHHHHHHHHHHhCCcEEEEECCCCCCCCCCCCcc------
Confidence 3455556555 67899999998 368999999999999999999999998999999999999999754321
Q ss_pred CCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 212 GDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 212 ~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
.++++++++++.+++++++.++++++||||||.+++.+|..+|++|+++|++++..
T Consensus 81 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~ 136 (286)
T PRK03204 81 ------------------------GYQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWF 136 (286)
T ss_pred ------------------------ccCHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccc
Confidence 17899999999999999999999999999999999999999999999999987642
Q ss_pred CCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHH
Q 013006 292 FWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAA 371 (451)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (451)
. .+............. .... ...+.. ........+.... .....+.....+......+....
T Consensus 137 ~---~~~~~~~~~~~~~~~---~~~~---~~~~~~-------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 198 (286)
T PRK03204 137 W---PADTLAMKAFSRVMS---SPPV---QYAILR-------RNFFVERLIPAGT--EHRPSSAVMAHYRAVQPNAAARR 198 (286)
T ss_pred c---CCCchhHHHHHHHhc---cccc---hhhhhh-------hhHHHHHhccccc--cCCCCHHHHHHhcCCCCCHHHHH
Confidence 1 000000000000000 0000 000000 0000011110000 00111122222222222222222
Q ss_pred HHHHHHhcCCCCCc-hhHHhhhcc--CCCCCEEEEeeCCCCCCChH-HHHHHHHHCCCCcEEEeCCCCCCccccChHHHH
Q 013006 372 SFASIMFAPQGNLS-FREALSRCQ--MNGVPICLIYGKEDPWVKPV-WGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCS 447 (451)
Q Consensus 372 ~~~~~~~~~~~~~~-~~~~~~~l~--~i~~PvLii~G~~D~~v~~~-~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~ 447 (451)
.+............ ..+....+. .+++|||+|+|++|.++++. ..+.+++.+|++++++++++||++++|+|++++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~~~ 278 (286)
T PRK03204 199 GVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQEDAPDRIA 278 (286)
T ss_pred HHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccccCHHHHH
Confidence 11111100000000 011111111 13899999999999988654 678899999999999999999999999999999
Q ss_pred hhhC
Q 013006 448 LCLL 451 (451)
Q Consensus 448 ~~Il 451 (451)
+.|.
T Consensus 279 ~~i~ 282 (286)
T PRK03204 279 AAII 282 (286)
T ss_pred HHHH
Confidence 9873
|
|
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-30 Score=249.22 Aligned_cols=253 Identities=20% Similarity=0.218 Sum_probs=163.5
Q ss_pred eEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhcccc
Q 013006 145 FNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWG 223 (451)
Q Consensus 145 ~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~ 223 (451)
.+|+|...|.+ ++|+|||+||++.+...|..+++.|++ +|+|+++|+||||.|+.+....
T Consensus 34 ~~i~y~~~G~~--~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~----------------- 94 (302)
T PRK00870 34 LRMHYVDEGPA--DGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRRE----------------- 94 (302)
T ss_pred EEEEEEecCCC--CCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcc-----------------
Confidence 78999999853 478999999999999999999999974 7999999999999997543211
Q ss_pred CCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCch
Q 013006 224 FGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSP 303 (451)
Q Consensus 224 ~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~ 303 (451)
.|+++++++|+.++++++++++++++||||||.+++.+|.++|++|+++|++++........ ...
T Consensus 95 ------------~~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~---~~~ 159 (302)
T PRK00870 95 ------------DYTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGP---MPD 159 (302)
T ss_pred ------------cCCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCcccc---chH
Confidence 27999999999999999999999999999999999999999999999999998742111000 000
Q ss_pred HHhhhcCCCCCCCChHH-HHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCC-
Q 013006 304 KLARILPWSGTFPLPAS-VRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQ- 381 (451)
Q Consensus 304 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 381 (451)
.......... ..+.. ............... +.... +...... ...... ...+........
T Consensus 160 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~--~~~~~~---------~~~~~~~~~~~~~ 221 (302)
T PRK00870 160 AFWAWRAFSQ--YSPVLPVGRLVNGGTVRDLSD----AVRAA-YDAPFPD--ESYKAG---------ARAFPLLVPTSPD 221 (302)
T ss_pred HHhhhhcccc--cCchhhHHHHhhccccccCCH----HHHHH-hhcccCC--hhhhcc---------hhhhhhcCCCCCC
Confidence 1111000000 00000 000000000000000 00000 0000000 000000 000000000000
Q ss_pred --CCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCc---EEEeCCCCCCccccChHHHHhhh
Q 013006 382 --GNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAP---YYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 382 --~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~---~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
......+....+.++++|+++|+|++|+++|... +++.+.+|+++ +.+++++||++++|+|+++++.|
T Consensus 222 ~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l 294 (302)
T PRK00870 222 DPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAV 294 (302)
T ss_pred CcchHHHHHHHHhhhcCCCceEEEecCCCCcccCch-HHHHhhcccccccceeeecCCCccchhhChHHHHHHH
Confidence 0001112334567899999999999999999876 88999999876 88999999999999999999876
|
|
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-30 Score=243.77 Aligned_cols=245 Identities=18% Similarity=0.233 Sum_probs=156.8
Q ss_pred EEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCC
Q 013006 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFG 225 (451)
Q Consensus 146 ~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~ 225 (451)
.++|...|. ..|+|||+||++.++..|..+++.|.++|+|+++|+||||.|....
T Consensus 3 ~~~y~~~G~---g~~~ivllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~---------------------- 57 (256)
T PRK10349 3 NIWWQTKGQ---GNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFG---------------------- 57 (256)
T ss_pred ccchhhcCC---CCCeEEEECCCCCChhHHHHHHHHHhcCCEEEEecCCCCCCCCCCC----------------------
Confidence 367888883 2246999999999999999999999989999999999999996421
Q ss_pred CCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHH
Q 013006 226 DKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKL 305 (451)
Q Consensus 226 ~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~ 305 (451)
.++++++++++.+ +..+++++|||||||.+++.+|.++|++|+++|++++.+.......
T Consensus 58 ----------~~~~~~~~~~l~~----~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~------- 116 (256)
T PRK10349 58 ----------ALSLADMAEAVLQ----QAPDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDE------- 116 (256)
T ss_pred ----------CCCHHHHHHHHHh----cCCCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCC-------
Confidence 1688888877653 5678999999999999999999999999999999998643211000
Q ss_pred hhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhc-cCh-hHHHHHHHHHhcCCCC
Q 013006 306 ARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETT-QHP-AAAASFASIMFAPQGN 383 (451)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~ 383 (451)
+... .......+...+.. ........++....... .........+.... ..+ .........+..
T Consensus 117 -----~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 182 (256)
T PRK10349 117 -----WPGI--KPDVLAGFQQQLSD--DFQRTVERFLALQTMGT-ETARQDARALKKTVLALPMPEVDVLNGGLEI---- 182 (256)
T ss_pred -----CCcc--cHHHHHHHHHHHHh--chHHHHHHHHHHHHccC-chHHHHHHHHHHHhhccCCCcHHHHHHHHHH----
Confidence 0000 00011111110000 00011111111100000 00011111111100 000 000000000000
Q ss_pred CchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 384 LSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 384 ~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
....+....+.++++|||+|+|++|.++|.+.++.+++.+|++++.+++++||++++|+|++|++.|
T Consensus 183 ~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~~~~~~i~~~gH~~~~e~p~~f~~~l 249 (256)
T PRK10349 183 LKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLL 249 (256)
T ss_pred HHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHH
Confidence 0001233456789999999999999999999999999999999999999999999999999999876
|
|
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=241.05 Aligned_cols=253 Identities=20% Similarity=0.258 Sum_probs=159.6
Q ss_pred CeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHH---HHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhh
Q 013006 144 KFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQ---LKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKN 219 (451)
Q Consensus 144 g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~---~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~ 219 (451)
|.+++|...| ++|+|||+||++.+...|..+ +..| .++|+|+++|+||||.|+......
T Consensus 19 ~~~~~y~~~g----~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~------------- 81 (282)
T TIGR03343 19 NFRIHYNEAG----NGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDE------------- 81 (282)
T ss_pred ceeEEEEecC----CCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcc-------------
Confidence 5779999887 357999999999888888643 3444 457999999999999997542110
Q ss_pred ccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCC
Q 013006 220 FLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNP 299 (451)
Q Consensus 220 ~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~ 299 (451)
..+. .+++++.+++++++.++++++||||||++++.+|.++|++|+++|++++.........+
T Consensus 82 ----------------~~~~-~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 144 (282)
T TIGR03343 82 ----------------QRGL-VNARAVKGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAP 144 (282)
T ss_pred ----------------cccc-hhHHHHHHHHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCcccccc
Confidence 0122 56889999999999999999999999999999999999999999999975321000000
Q ss_pred CCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHh-hccChhHHHHHHHHHh
Q 013006 300 IRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILE-TTQHPAAAASFASIMF 378 (451)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 378 (451)
.... ......... ...........+...........+........ ....+.....+.....
T Consensus 145 ~~~~----------------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (282)
T TIGR03343 145 MPME----------------GIKLLFKLY--AEPSYETLKQMLNVFLFDQSLITEELLQGRWENIQRQPEHLKNFLISSQ 206 (282)
T ss_pred CchH----------------HHHHHHHHh--cCCCHHHHHHHHhhCccCcccCcHHHHHhHHHHhhcCHHHHHHHHHhcc
Confidence 0000 000000000 00000111111111000000001111111110 0111111111111000
Q ss_pred cCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 379 APQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 379 ~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
.......+....++++++|+|+|+|++|.+++++.++++++.+|++++++++++||+++.|+|+++++.|
T Consensus 207 --~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~i 276 (282)
T TIGR03343 207 --KAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPDAQLHVFSRCGHWAQWEHADAFNRLV 276 (282)
T ss_pred --ccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCCCCEEEEeCCCCcCCcccCHHHHHHHH
Confidence 0011112334456789999999999999999999999999999999999999999999999999999876
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-29 Score=238.13 Aligned_cols=263 Identities=21% Similarity=0.255 Sum_probs=172.3
Q ss_pred eecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhh
Q 013006 140 EWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKN 219 (451)
Q Consensus 140 ~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~ 219 (451)
...+|.+++|...|+. ++|+|||+||++++...|..+++.|+++|+|+++|+||||.|+.+...
T Consensus 11 ~~~~~~~~~~~~~g~~--~~~~vv~~hG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~-------------- 74 (278)
T TIGR03056 11 VTVGPFHWHVQDMGPT--AGPLLLLLHGTGASTHSWRDLMPPLARSFRVVAPDLPGHGFTRAPFRF-------------- 74 (278)
T ss_pred eeECCEEEEEEecCCC--CCCeEEEEcCCCCCHHHHHHHHHHHhhCcEEEeecCCCCCCCCCcccc--------------
Confidence 3458999999999863 468999999999999999999999998999999999999999754321
Q ss_pred ccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCC
Q 013006 220 FLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNP 299 (451)
Q Consensus 220 ~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~ 299 (451)
.++++++++|+.++++++++++++|+||||||++++.+|.++|++++++|++++..........
T Consensus 75 ----------------~~~~~~~~~~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~ 138 (278)
T TIGR03056 75 ----------------RFTLPSMAEDLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAG 138 (278)
T ss_pred ----------------CCCHHHHHHHHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccc
Confidence 1799999999999999999999999999999999999999999999999999875321000000
Q ss_pred CCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChH-HHHHHHHhhccChhHHHHHHHHHh
Q 013006 300 IRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVD-TVFTRILETTQHPAAAASFASIMF 378 (451)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 378 (451)
...+....... .... ...+.. ........+..... ......+ .....+..................
T Consensus 139 ~~~~~~~~~~~---~~~~---~~~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (278)
T TIGR03056 139 TLFPYMARVLA---CNPF---TPPMMS---RGAADQQRVERLIR----DTGSLLDKAGMTYYGRLIRSPAHVDGALSMMA 205 (278)
T ss_pred cccchhhHhhh---hccc---chHHHH---hhcccCcchhHHhh----ccccccccchhhHHHHhhcCchhhhHHHHHhh
Confidence 00000000000 0000 000000 00000011111111 0000000 000101000111110111111110
Q ss_pred cCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhhC
Q 013006 379 APQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCLL 451 (451)
Q Consensus 379 ~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~Il 451 (451)
.+........+.++++|+++|+|++|.++|++..+.+.+.++++++.+++++||++++|+|+++++.|.
T Consensus 206 ----~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 274 (278)
T TIGR03056 206 ----QWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDESKRAATRVPTATLHVVPGGGHLVHEEQADGVVGLIL 274 (278)
T ss_pred ----cccccchhhhcccCCCCEEEEEeCCCcccCHHHHHHHHHhccCCeEEEECCCCCcccccCHHHHHHHHH
Confidence 111112334567889999999999999999999999999999999999999999999999999998873
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=237.09 Aligned_cols=236 Identities=19% Similarity=0.301 Sum_probs=153.2
Q ss_pred cEEEecCCCCChhcHHHHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCH
Q 013006 161 PVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSV 239 (451)
Q Consensus 161 ~VlllHG~~~~~~~~~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~ 239 (451)
.|||+||++.+...|+.+++.| .++|+|+++|+||||.|..+... .+++
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~------------------------------~~~~ 54 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNT------------------------------VSSS 54 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCccc------------------------------cCCH
Confidence 5999999999999999999999 66899999999999999643221 1789
Q ss_pred HHHHHHHHHHHHHhCC-CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCCh
Q 013006 240 DLWQDQVCYFIKEVIR-EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLP 318 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~~-~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (451)
+++++|+.+++++++. +++++|||||||.+++.+|.++|++|+++|++++.+.... ...............
T Consensus 55 ~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~---~~~~~~~~~~~~~~~----- 126 (255)
T PLN02965 55 DQYNRPLFALLSDLPPDHKVILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPG---SIISPRLKNVMEGTE----- 126 (255)
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEecCcchHHHHHHHHhCchheeEEEEEccccCCCC---CCccHHHHhhhhccc-----
Confidence 9999999999999987 5999999999999999999999999999999998632100 000111110000000
Q ss_pred HHHHHHHHHHH-HhcCChH---HH-HHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhc
Q 013006 319 ASVRKLIEFIW-QKISDPE---SI-AEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRC 393 (451)
Q Consensus 319 ~~~~~~~~~~~-~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 393 (451)
....... .....+. .. .......+... ...+. ........ .+.....+. ...+....+
T Consensus 127 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~-~~~~~~~~~----------~~~~~~~~~ 189 (255)
T PLN02965 127 ----KIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQ-SPLED-YTLSSKLL-RPAPVRAFQ----------DLDKLPPNP 189 (255)
T ss_pred ----cceeeeeccCCCCCcchhhcCHHHHHHHHhcC-CCHHH-HHHHHHhc-CCCCCcchh----------hhhhccchh
Confidence 0000000 0000000 00 00110111010 00000 00000000 000000000 001111234
Q ss_pred cCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhhC
Q 013006 394 QMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCLL 451 (451)
Q Consensus 394 ~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~Il 451 (451)
..+++|+++|+|++|.++|++.++.+++.+|++++++++++||++++|+|++|++.|+
T Consensus 190 ~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a~~~~i~~~GH~~~~e~p~~v~~~l~ 247 (255)
T PLN02965 190 EAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPAQTYVLEDSDHSAFFSVPTTLFQYLL 247 (255)
T ss_pred hcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcceEEEecCCCCchhhcCHHHHHHHHH
Confidence 5689999999999999999999999999999999999999999999999999998763
|
|
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-29 Score=231.68 Aligned_cols=270 Identities=21% Similarity=0.343 Sum_probs=178.0
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccc
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLW 222 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w 222 (451)
++..+......+++.+.+++||+||+|++...|...++.|++.++|+++|++|+|.|+++.-+....
T Consensus 74 ~~~~iw~~~~~~~~~~~~plVliHGyGAg~g~f~~Nf~~La~~~~vyaiDllG~G~SSRP~F~~d~~------------- 140 (365)
T KOG4409|consen 74 NGIEIWTITVSNESANKTPLVLIHGYGAGLGLFFRNFDDLAKIRNVYAIDLLGFGRSSRPKFSIDPT------------- 140 (365)
T ss_pred CCceeEEEeecccccCCCcEEEEeccchhHHHHHHhhhhhhhcCceEEecccCCCCCCCCCCCCCcc-------------
Confidence 5566666666666667899999999999999999999999999999999999999998875432111
Q ss_pred cCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCc
Q 013006 223 GFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRS 302 (451)
Q Consensus 223 ~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~ 302 (451)
-..+.+++-+.++....++++.+|||||+||+++..||.+||++|+.|||++|.++.. .+...
T Consensus 141 --------------~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~---~~~~~ 203 (365)
T KOG4409|consen 141 --------------TAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPE---KPDSE 203 (365)
T ss_pred --------------cchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEeccccccc---CCCcc
Confidence 3455889999999999999999999999999999999999999999999999975432 22111
Q ss_pred hHH--------hhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChH-HH-HHHHHhhc-cChhHHH
Q 013006 303 PKL--------ARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVD-TV-FTRILETT-QHPAAAA 371 (451)
Q Consensus 303 ~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~-~~~~~~~ 371 (451)
+.. ..+..|...+.--..++. .....+..+..+....+.......+ +. .+.++... ..+....
T Consensus 204 ~~~~~~~~~w~~~~~~~~~~~nPl~~LR~------~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~ 277 (365)
T KOG4409|consen 204 PEFTKPPPEWYKALFLVATNFNPLALLRL------MGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGET 277 (365)
T ss_pred hhhcCCChHHHhhhhhhhhcCCHHHHHHh------ccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHH
Confidence 111 111122211111111111 1112233333333333332221111 22 23333322 3333333
Q ss_pred HHHHHHhcCCCCCchhHHhhhccCCC--CCEEEEeeCCCCCCChHHHHHHHHHC--CCCcEEEeCCCCCCccccChHHHH
Q 013006 372 SFASIMFAPQGNLSFREALSRCQMNG--VPICLIYGKEDPWVKPVWGLQVKRQV--PEAPYYEISPAGHCPHDEVPEVCS 447 (451)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~l~~i~--~PvLii~G~~D~~v~~~~~~~l~~~l--p~~~~~~i~~~gH~~~~e~p~~v~ 447 (451)
.+...+.. . .+.....+.++..++ ||+++|+|++| +++...+.++.+.+ ..++.+++|++||.+.+|+|+.|+
T Consensus 278 ~fk~l~~~-~-g~Ar~Pm~~r~~~l~~~~pv~fiyG~~d-WmD~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn 354 (365)
T KOG4409|consen 278 AFKNLFEP-G-GWARRPMIQRLRELKKDVPVTFIYGDRD-WMDKNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFN 354 (365)
T ss_pred HHHHHHhc-c-chhhhhHHHHHHhhccCCCEEEEecCcc-cccchhHHHHHHHhhcccceEEEecCCCceeecCCHHHHH
Confidence 33333322 1 233345666666665 99999999999 55666666666543 348999999999999999999999
Q ss_pred hhhC
Q 013006 448 LCLL 451 (451)
Q Consensus 448 ~~Il 451 (451)
+.|+
T Consensus 355 ~~v~ 358 (365)
T KOG4409|consen 355 QIVL 358 (365)
T ss_pred HHHH
Confidence 9874
|
|
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-29 Score=234.06 Aligned_cols=243 Identities=16% Similarity=0.180 Sum_probs=161.6
Q ss_pred EEEEeecCCC-CCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccC
Q 013006 146 NVHYEKAGCE-NVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGF 224 (451)
Q Consensus 146 ~l~y~~~g~~-~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~ 224 (451)
+++|...++. ..++|+|||+||++++...|..++..|+++|+|+++|+||||.|.....
T Consensus 2 ~~~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~s~~~~~-------------------- 61 (255)
T PRK10673 2 KLNIRAQTAQNPHNNSPIVLVHGLFGSLDNLGVLARDLVNDHDIIQVDMRNHGLSPRDPV-------------------- 61 (255)
T ss_pred cceeeeccCCCCCCCCCEEEECCCCCchhHHHHHHHHHhhCCeEEEECCCCCCCCCCCCC--------------------
Confidence 4556664333 2467999999999999999999999999999999999999999975321
Q ss_pred CCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchH
Q 013006 225 GDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPK 304 (451)
Q Consensus 225 ~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~ 304 (451)
++++++++|+.+++++++.++++|+||||||++++.+|.++|++|+++|++++.+..... ....
T Consensus 62 ------------~~~~~~~~d~~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~---~~~~- 125 (255)
T PRK10673 62 ------------MNYPAMAQDLLDTLDALQIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHV---RRHD- 125 (255)
T ss_pred ------------CCHHHHHHHHHHHHHHcCCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccc---hhhH-
Confidence 699999999999999999999999999999999999999999999999999875421100 0000
Q ss_pred HhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhH---HHHHHHHHhcCC
Q 013006 305 LARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAA---AASFASIMFAPQ 381 (451)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 381 (451)
.....+.................+...+. ................. ..........
T Consensus 126 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 184 (255)
T PRK10673 126 --------------EIFAAINAVSEAGATTRQQAAAIMRQHLN-----EEGVIQFLLKSFVDGEWRFNVPVLWDQYPH-- 184 (255)
T ss_pred --------------HHHHHHHHhhhcccccHHHHHHHHHHhcC-----CHHHHHHHHhcCCcceeEeeHHHHHHhHHH--
Confidence 00000000000000001111111111100 00000000001100000 0000000000
Q ss_pred CCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 382 GNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 382 ~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
......++.+++|+|+|+|++|.+++++..+.+++.+|++++.+++++||++++|+|+++++.|
T Consensus 185 -----~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~l 248 (255)
T PRK10673 185 -----IVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQARAHVIAGAGHWVHAEKPDAVLRAI 248 (255)
T ss_pred -----HhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCeeeccCHHHHHHHH
Confidence 0011235678999999999999999999999999999999999999999999999999998876
|
|
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-29 Score=246.82 Aligned_cols=275 Identities=17% Similarity=0.228 Sum_probs=163.5
Q ss_pred cCCeEEEEeecCCCC-----CCCCcEEEecCCCCChhcHH--HHHHhh--------cCCceEEEEcCCCCCCCCCCCCCC
Q 013006 142 KPKFNVHYEKAGCEN-----VNSPPVLFLPGFGVGSFHYE--KQLKDL--------GKDYRAWAIDFLGQGMSLPDEDPT 206 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~-----~~~p~VlllHG~~~~~~~~~--~~~~~L--------~~~~~Vi~~D~rG~G~S~~~~~~~ 206 (451)
.+|.+++|...|..+ ..+|+|||+||++++...|. .+.+.| +++|+||++|+||||.|+.+....
T Consensus 47 ~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~ 126 (360)
T PRK06489 47 LPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGL 126 (360)
T ss_pred cCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCC
Confidence 568999999999531 01689999999999988886 454444 678999999999999997543211
Q ss_pred CCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHH-HHhCCCCEE-EEEeCcchHHHHHHHHhCCCccceE
Q 013006 207 PRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFI-KEVIREPVY-VVGNSLGGFVAVYFAACNPHLVKGV 284 (451)
Q Consensus 207 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll-~~l~~~~v~-lvGhS~GG~val~~A~~~P~~v~~l 284 (451)
... + ..|+++++++++..++ +++++++++ |+||||||++|+.+|.++|++|+++
T Consensus 127 ~~~--------------~----------~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~L 182 (360)
T PRK06489 127 RAA--------------F----------PRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDAL 182 (360)
T ss_pred CCC--------------C----------CcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhhee
Confidence 000 0 0279999999988854 889999985 8999999999999999999999999
Q ss_pred EEeccCCCCCCCCCCCCchH-Hhhh---cCCC-CCCC-ChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHH
Q 013006 285 TLLNATPFWGFSPNPIRSPK-LARI---LPWS-GTFP-LPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFT 358 (451)
Q Consensus 285 vl~~~~~~~~~~~~~~~~~~-~~~~---~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (451)
|++++.+............. .... ..+. ..+. .+............ ....... ...............+.
T Consensus 183 VLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~ 258 (360)
T PRK06489 183 MPMASQPTEMSGRNWMWRRMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAI-ATSGGTL---AYQAQAPTRAAADKLVD 258 (360)
T ss_pred eeeccCcccccHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHH-HHhCCHH---HHHHhcCChHHHHHHHH
Confidence 99998642100000000000 0000 0010 0000 01111111100000 0000000 00000000000011111
Q ss_pred HHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHH--HHHHHHCCCCcEEEeCCC--
Q 013006 359 RILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWG--LQVKRQVPEAPYYEISPA-- 434 (451)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~--~~l~~~lp~~~~~~i~~~-- 434 (451)
........... ..+...... ... .+..+.+.+|++|||+|+|++|.++|++.+ +++++.+|++++++++++
T Consensus 259 ~~~~~~~~~~~-~~~~~~~~~-~~~---~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~ 333 (360)
T PRK06489 259 ERLAAPVTADA-NDFLYQWDS-SRD---YNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPE 333 (360)
T ss_pred HHHHhhhhcCH-HHHHHHHHH-hhc---cChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCC
Confidence 11111111101 111111110 001 123456678999999999999999999875 789999999999999996
Q ss_pred --CCCccccChHHHHhhh
Q 013006 435 --GHCPHDEVPEVCSLCL 450 (451)
Q Consensus 435 --gH~~~~e~p~~v~~~I 450 (451)
||+++ |+|++|++.|
T Consensus 334 ~~GH~~~-e~P~~~~~~i 350 (360)
T PRK06489 334 TRGHGTT-GSAKFWKAYL 350 (360)
T ss_pred CCCcccc-cCHHHHHHHH
Confidence 99997 8999999876
|
|
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-29 Score=233.87 Aligned_cols=250 Identities=20% Similarity=0.267 Sum_probs=163.9
Q ss_pred EEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCC
Q 013006 147 VHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGD 226 (451)
Q Consensus 147 l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~ 226 (451)
++|+..|+.++++|+|||+||+++++..|..++..|.++|+|+++|+||||.|......
T Consensus 1 ~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~--------------------- 59 (257)
T TIGR03611 1 MHYELHGPPDADAPVVVLSSGLGGSGSYWAPQLDVLTQRFHVVTYDHRGTGRSPGELPP--------------------- 59 (257)
T ss_pred CEEEEecCCCCCCCEEEEEcCCCcchhHHHHHHHHHHhccEEEEEcCCCCCCCCCCCcc---------------------
Confidence 47888887656789999999999999999999999998999999999999999753221
Q ss_pred CCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHh
Q 013006 227 KAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLA 306 (451)
Q Consensus 227 ~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 306 (451)
.++++++++++.+++++++.++++++||||||++++.+|.++|++|+++|++++..... +.......
T Consensus 60 ---------~~~~~~~~~~~~~~i~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~----~~~~~~~~ 126 (257)
T TIGR03611 60 ---------GYSIAHMADDVLQLLDALNIERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPD----PHTRRCFD 126 (257)
T ss_pred ---------cCCHHHHHHHHHHHHHHhCCCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCC----hhHHHHHH
Confidence 27999999999999999999999999999999999999999999999999998753210 00000000
Q ss_pred hhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhcc-ChhHHHHHHHHHhcCCCCCc
Q 013006 307 RILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQ-HPAAAASFASIMFAPQGNLS 385 (451)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 385 (451)
....+................. ... .+.................... .......+.... ..
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~----~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~- 188 (257)
T TIGR03611 127 VRIALLQHAGPEAYVHAQALFL----YPA--------DWISENAARLAADEAHALAHFPGKANVLRRINALE-----AF- 188 (257)
T ss_pred HHHHHHhccCcchhhhhhhhhh----ccc--------cHhhccchhhhhhhhhcccccCccHHHHHHHHHHH-----cC-
Confidence 0000000000000000000000 000 0000000000000000000000 000000000000 11
Q ss_pred hhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 386 FREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 386 ~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
+....+.++++|+++++|++|.++|++.++++.+.+++++++.++++||++++++|+++++.|
T Consensus 189 --~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i 251 (257)
T TIGR03611 189 --DVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALPNAQLKLLPYGGHASNVTDPETFNRAL 251 (257)
T ss_pred --CcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcCCceEEEECCCCCCccccCHHHHHHHH
Confidence 122456678999999999999999999999999999999999999999999999999999876
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=241.88 Aligned_cols=254 Identities=15% Similarity=0.192 Sum_probs=162.1
Q ss_pred ccceeeecCCeEEEEeecCCCC-CCCCcEEEecCCCCChhc-HHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCC
Q 013006 135 TSCFWEWKPKFNVHYEKAGCEN-VNSPPVLFLPGFGVGSFH-YEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKE 211 (451)
Q Consensus 135 ~~~~~~~~~g~~l~y~~~g~~~-~~~p~VlllHG~~~~~~~-~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~ 211 (451)
...+....+|.+|+|..+++.+ +.+++|||+||++.+... |..++..|++ +|+|+++|+||||.|+.....
T Consensus 62 ~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~------ 135 (349)
T PLN02385 62 EESYEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGY------ 135 (349)
T ss_pred eeeeEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCC------
Confidence 3445556799999999998753 345789999999888654 6888899965 899999999999999753211
Q ss_pred CCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCC------CEEEEEeCcchHHHHHHHHhCCCccceEE
Q 013006 212 GDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIRE------PVYVVGNSLGGFVAVYFAACNPHLVKGVT 285 (451)
Q Consensus 212 ~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~------~v~lvGhS~GG~val~~A~~~P~~v~~lv 285 (451)
..+++++++|+.++++.+..+ +++|+||||||++++.+|.++|++|+++|
T Consensus 136 ------------------------~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glV 191 (349)
T PLN02385 136 ------------------------IPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAI 191 (349)
T ss_pred ------------------------cCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhhee
Confidence 148899999999999887543 79999999999999999999999999999
Q ss_pred EeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHH--HHHHHHHhhcCCCChHHHHHHHH-h
Q 013006 286 LLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESI--AEVLKQVYADHATNVDTVFTRIL-E 362 (451)
Q Consensus 286 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~ 362 (451)
++++...... ....... ...+...+.......... .......+... ......... .
T Consensus 192 Li~p~~~~~~--~~~~~~~----------------~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 250 (349)
T PLN02385 192 LVAPMCKIAD--DVVPPPL----------------VLQILILLANLLPKAKLVPQKDLAELAFRDL---KKRKMAEYNVI 250 (349)
T ss_pred Eecccccccc--cccCchH----------------HHHHHHHHHHHCCCceecCCCccccccccCH---HHHHHhhcCcc
Confidence 9998542110 0000000 000000000000000000 00000000000 000000000 0
Q ss_pred hccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHC--CCCcEEEeCCCCCCccc
Q 013006 363 TTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQV--PEAPYYEISPAGHCPHD 440 (451)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l--p~~~~~~i~~~gH~~~~ 440 (451)
..............+. ...+....+.++++|+|+|+|++|.++|++.++.+.+.+ +++++++++++||+++.
T Consensus 251 ~~~~~~~~~~~~~~l~------~~~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~ 324 (349)
T PLN02385 251 AYKDKPRLRTAVELLR------TTQEIEMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILE 324 (349)
T ss_pred eeCCCcchHHHHHHHH------HHHHHHHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeeccc
Confidence 0000000001111110 012334456789999999999999999999999999887 56899999999999999
Q ss_pred cChHH
Q 013006 441 EVPEV 445 (451)
Q Consensus 441 e~p~~ 445 (451)
|+|++
T Consensus 325 e~p~~ 329 (349)
T PLN02385 325 GEPDE 329 (349)
T ss_pred CCChh
Confidence 99987
|
|
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-29 Score=240.36 Aligned_cols=253 Identities=30% Similarity=0.452 Sum_probs=158.0
Q ss_pred CCCCcEEEecCCCCChhcHHHHHHhhcCC--ceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccc
Q 013006 157 VNSPPVLFLPGFGVGSFHYEKQLKDLGKD--YRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASE 234 (451)
Q Consensus 157 ~~~p~VlllHG~~~~~~~~~~~~~~L~~~--~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 234 (451)
.++++||++|||+++..+|+.++..|.+. ++|+++|++|+|.++..+...
T Consensus 56 ~~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~---------------------------- 107 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGP---------------------------- 107 (326)
T ss_pred CCCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCC----------------------------
Confidence 46899999999999999999999999876 999999999999655433322
Q ss_pred cccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEec---cCCCCCCCCCCCCchHHhhhcC-
Q 013006 235 LAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLN---ATPFWGFSPNPIRSPKLARILP- 310 (451)
Q Consensus 235 ~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~---~~~~~~~~~~~~~~~~~~~~~~- 310 (451)
.|+..++++.+..+..+...+++++||||+||++|+.+|+.+|+.|+++|+++ +... .... ..........
T Consensus 108 -~y~~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~---~~~~-~~~~~~~~~~~ 182 (326)
T KOG1454|consen 108 -LYTLRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVY---STPK-GIKGLRRLLDK 182 (326)
T ss_pred -ceehhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccc---cCCc-chhHHHHhhhh
Confidence 28999999999999999999999999999999999999999999999999554 4321 1110 0000000000
Q ss_pred CCCC--CCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhH
Q 013006 311 WSGT--FPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFRE 388 (451)
Q Consensus 311 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (451)
.... ...+........ .....+...+...+.+.....+..................+..++...... ...
T Consensus 183 ~~~~~~~~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 254 (326)
T KOG1454|consen 183 FLSALELLIPLSLTEPVR------LVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGF--DEN 254 (326)
T ss_pred hccHhhhcCccccccchh------heeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCc--cch
Confidence 0000 000000000000 000000000000111111111111111111000111111111111111110 122
Q ss_pred HhhhccCCC-CCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 389 ALSRCQMNG-VPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 389 ~~~~l~~i~-~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
....++++. ||+|+++|++|+++|.+.++.+++.+|++++++++++||++|+|+|+++++.|
T Consensus 255 ~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~pn~~~~~I~~~gH~~h~e~Pe~~~~~i 317 (326)
T KOG1454|consen 255 LLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKLPNAELVEIPGAGHLPHLERPEEVAALL 317 (326)
T ss_pred HHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhCCCceEEEeCCCCcccccCCHHHHHHHH
Confidence 333455666 99999999999999999999999999999999999999999999999999887
|
|
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.2e-28 Score=223.87 Aligned_cols=245 Identities=25% Similarity=0.309 Sum_probs=163.2
Q ss_pred EEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCC
Q 013006 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFG 225 (451)
Q Consensus 146 ~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~ 225 (451)
+++|...|+. +..|+|||+||++.+...|..++..|.++|+|+++|+||||.|.....
T Consensus 1 ~~~~~~~g~~-~~~~~li~~hg~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~--------------------- 58 (251)
T TIGR02427 1 RLHYRLDGAA-DGAPVLVFINSLGTDLRMWDPVLPALTPDFRVLRYDKRGHGLSDAPEG--------------------- 58 (251)
T ss_pred CceEEeecCC-CCCCeEEEEcCcccchhhHHHHHHHhhcccEEEEecCCCCCCCCCCCC---------------------
Confidence 3678777753 246889999999999999999999999899999999999999964321
Q ss_pred CCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHH
Q 013006 226 DKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKL 305 (451)
Q Consensus 226 ~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~ 305 (451)
.++++++++++.++++.++.++++++||||||++++.+|.++|++|+++|++++....... ....
T Consensus 59 ----------~~~~~~~~~~~~~~i~~~~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~-----~~~~ 123 (251)
T TIGR02427 59 ----------PYSIEDLADDVLALLDHLGIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTP-----ESWN 123 (251)
T ss_pred ----------CCCHHHHHHHHHHHHHHhCCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCch-----hhHH
Confidence 1799999999999999999999999999999999999999999999999999875321100 0000
Q ss_pred hhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCC-ChHHHHHHHHhhccChhHHHHHHHHHhcCCCCC
Q 013006 306 ARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHAT-NVDTVFTRILETTQHPAAAASFASIMFAPQGNL 384 (451)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (451)
....... ... .... ....+..++..... ........+........ ...+...... .
T Consensus 124 ~~~~~~~-~~~----~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~ 180 (251)
T TIGR02427 124 ARIAAVR-AEG----LAAL-------------ADAVLERWFTPGFREAHPARLDLYRNMLVRQP-PDGYAGCCAA----I 180 (251)
T ss_pred HHHhhhh-hcc----HHHH-------------HHHHHHHHcccccccCChHHHHHHHHHHHhcC-HHHHHHHHHH----H
Confidence 0000000 000 0000 00011111110000 00011111111000000 0001100000 0
Q ss_pred chhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 385 SFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 385 ~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
...+....+.++++|+++++|++|.++|++..+.+.+.+++.++++++++||++++++|+++++.|
T Consensus 181 ~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i 246 (251)
T TIGR02427 181 RDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVPGARFAEIRGAGHIPCVEQPEAFNAAL 246 (251)
T ss_pred hcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCCCceEEEECCCCCcccccChHHHHHHH
Confidence 011223445678999999999999999999999999999999999999999999999999998875
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.7e-28 Score=223.48 Aligned_cols=235 Identities=18% Similarity=0.249 Sum_probs=151.2
Q ss_pred CcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCH
Q 013006 160 PPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSV 239 (451)
Q Consensus 160 p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~ 239 (451)
|+|||+||++++...|..++..|+++|+|+++|+||||.|..... +++
T Consensus 5 ~~iv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~--------------------------------~~~ 52 (245)
T TIGR01738 5 VHLVLIHGWGMNAEVFRCLDEELSAHFTLHLVDLPGHGRSRGFGP--------------------------------LSL 52 (245)
T ss_pred ceEEEEcCCCCchhhHHHHHHhhccCeEEEEecCCcCccCCCCCC--------------------------------cCH
Confidence 789999999999999999999999899999999999999864321 578
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChH
Q 013006 240 DLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPA 319 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (451)
+++++++..++ .++++++||||||.+++.+|.++|++++++|++++.+.+.... .|.... .+.
T Consensus 53 ~~~~~~~~~~~----~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~------------~~~~~~-~~~ 115 (245)
T TIGR01738 53 ADAAEAIAAQA----PDPAIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSARE------------DWPEGI-KPD 115 (245)
T ss_pred HHHHHHHHHhC----CCCeEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCC------------cccccC-CHH
Confidence 88888876543 3799999999999999999999999999999999865321110 000000 001
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHH-HHhhcCCCC-hHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccCCC
Q 013006 320 SVRKLIEFIWQKISDPESIAEVLK-QVYADHATN-VDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNG 397 (451)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 397 (451)
....+...+... .......+.. ..+...... ....+.........+.. ..+....... ...+....+.+++
T Consensus 116 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~l~~i~ 188 (245)
T TIGR01738 116 VLTGFQQQLSDD--YQRTIERFLALQTLGTPTARQDARALKQTLLARPTPNV-QVLQAGLEIL----ATVDLRQPLQNIS 188 (245)
T ss_pred HHHHHHHHhhhh--HHHHHHHHHHHHHhcCCccchHHHHHHHHhhccCCCCH-HHHHHHHHHh----hcccHHHHHhcCC
Confidence 111111100000 0000111111 001111000 00111111111111100 1111111100 0112344567899
Q ss_pred CCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 398 VPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 398 ~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
+|+++|+|++|.+++++..+.+.+.+|++++.+++++||++++|+|+++++.|
T Consensus 189 ~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i 241 (245)
T TIGR01738 189 VPFLRLYGYLDGLVPAKVVPYLDKLAPHSELYIFAKAAHAPFLSHAEAFCALL 241 (245)
T ss_pred CCEEEEeecCCcccCHHHHHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999886
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-28 Score=222.06 Aligned_cols=228 Identities=25% Similarity=0.391 Sum_probs=155.6
Q ss_pred EEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHH
Q 013006 162 VLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDL 241 (451)
Q Consensus 162 VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~ 241 (451)
|||+||++++...|..+++.|+++|+|+++|+||+|.|....... .+++++
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~-----------------------------~~~~~~ 51 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALARGYRVIAFDLPGHGRSDPPPDYS-----------------------------PYSIED 51 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHHTTSEEEEEECTTSTTSSSHSSGS-----------------------------GGSHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHhCCCEEEEEecCCccccccccccC-----------------------------Ccchhh
Confidence 799999999999999999999889999999999999997644211 279999
Q ss_pred HHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHH
Q 013006 242 WQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASV 321 (451)
Q Consensus 242 ~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (451)
+++|+.+++++++.++++++|||+||.+++.++.++|++|+++|++++.... ..... ....+..+
T Consensus 52 ~~~~l~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~---------~~~~~------~~~~~~~~ 116 (228)
T PF12697_consen 52 YAEDLAELLDALGIKKVILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPL---------PDSPS------RSFGPSFI 116 (228)
T ss_dssp HHHHHHHHHHHTTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSSH---------HHHHC------HHHHHHHH
T ss_pred hhhhhhhcccccccccccccccccccccccccccccccccccceeecccccc---------ccccc------ccccchhh
Confidence 9999999999999999999999999999999999999999999999986420 00000 00000111
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEE
Q 013006 322 RKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPIC 401 (451)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvL 401 (451)
..+........ .......+.... ........... ....+....... ....+....++++++|++
T Consensus 117 ~~~~~~~~~~~--~~~~~~~~~~~~------~~~~~~~~~~~-----~~~~~~~~~~~~---~~~~~~~~~~~~~~~pvl 180 (228)
T PF12697_consen 117 RRLLAWRSRSL--RRLASRFFYRWF------DGDEPEDLIRS-----SRRALAEYLRSN---LWQADLSEALPRIKVPVL 180 (228)
T ss_dssp HHHHHHHHHHH--HHHHHHHHHHHH------THHHHHHHHHH-----HHHHHHHHHHHH---HHHHHHHHHHHGSSSEEE
T ss_pred hhhhhcccccc--cccccccccccc------ccccccccccc-----cccccccccccc---cccccccccccccCCCeE
Confidence 11111100000 000001111111 01111111111 111111111000 111344456677899999
Q ss_pred EEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhh
Q 013006 402 LIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLC 449 (451)
Q Consensus 402 ii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~ 449 (451)
+++|++|.+++.+..+++.+.++++++++++++||++++|+|++|+++
T Consensus 181 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 181 VIHGEDDPIVPPESAEELADKLPNAELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp EEEETTSSSSHHHHHHHHHHHSTTEEEEEETTSSSTHHHHSHHHHHHH
T ss_pred EeecCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCccHHHCHHHHhcC
Confidence 999999999999999999999999999999999999999999999874
|
... |
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.1e-28 Score=236.93 Aligned_cols=284 Identities=15% Similarity=0.128 Sum_probs=168.3
Q ss_pred cCCeEEEEeecCCCC-CCCCcEEEecCCCCChh-----------cHHHHH----HhhcCCceEEEEcCCC--CCCCCCCC
Q 013006 142 KPKFNVHYEKAGCEN-VNSPPVLFLPGFGVGSF-----------HYEKQL----KDLGKDYRAWAIDFLG--QGMSLPDE 203 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~-~~~p~VlllHG~~~~~~-----------~~~~~~----~~L~~~~~Vi~~D~rG--~G~S~~~~ 203 (451)
.+|++|+|..+|+.+ ..+++|||+||++++.. .|+.++ ..+.++|+|+++|+|| ||.|.+..
T Consensus 13 ~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~ 92 (351)
T TIGR01392 13 LSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSS 92 (351)
T ss_pred cCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCC
Confidence 468999999999643 23579999999999764 378876 3346789999999999 56654321
Q ss_pred CCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCC-EEEEEeCcchHHHHHHHHhCCCccc
Q 013006 204 DPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREP-VYVVGNSLGGFVAVYFAACNPHLVK 282 (451)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~-v~lvGhS~GG~val~~A~~~P~~v~ 282 (451)
..... ..|+- +...++++++++++..+++++++++ ++++||||||++++.+|.++|++|+
T Consensus 93 ~~~~~-----------~~~~~--------~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~ 153 (351)
T TIGR01392 93 INPGG-----------RPYGS--------DFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVR 153 (351)
T ss_pred CCCCC-----------CcCCC--------CCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhh
Confidence 11000 00100 0013799999999999999999999 9999999999999999999999999
Q ss_pred eEEEeccCCCCCCCCCCCCchHHh-hh---cCCCC-CCCC---hHHHHHHHHHH-HHhcCChHHHHHHHHHHhhcCCCC-
Q 013006 283 GVTLLNATPFWGFSPNPIRSPKLA-RI---LPWSG-TFPL---PASVRKLIEFI-WQKISDPESIAEVLKQVYADHATN- 352 (451)
Q Consensus 283 ~lvl~~~~~~~~~~~~~~~~~~~~-~~---~~~~~-~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~- 352 (451)
++|++++.+........ ...... .+ ..|.. .+.. +.........+ ......... +...+......
T Consensus 154 ~lvl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~----~~~~f~~~~~~~ 228 (351)
T TIGR01392 154 AIVVLATSARHSAWCIA-FNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEES----MAERFGRAPQSG 228 (351)
T ss_pred eEEEEccCCcCCHHHHH-HHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHH----HHHHhCcCcccc
Confidence 99999986532110000 000000 00 01110 0000 10000001110 000111111 11222111100
Q ss_pred ------------hHHHHH----HHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHH
Q 013006 353 ------------VDTVFT----RILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWG 416 (451)
Q Consensus 353 ------------~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~ 416 (451)
.+.... .+... ..+.........+..........+..+.+++|++|+|+|+|++|.++|++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~ 307 (351)
T TIGR01392 229 ESPASGFDTRFQVESYLRYQGDKFVDR-FDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAES 307 (351)
T ss_pred cccccccCccchHHHHHHHHHHHHHhh-cCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHH
Confidence 001100 11111 1111111111111111000001234566788999999999999999999999
Q ss_pred HHHHHHCCCCcEE-----EeCCCCCCccccChHHHHhhh
Q 013006 417 LQVKRQVPEAPYY-----EISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 417 ~~l~~~lp~~~~~-----~i~~~gH~~~~e~p~~v~~~I 450 (451)
+.+++.+|++++. +++++||++++|+|++|++.|
T Consensus 308 ~~~a~~i~~~~~~v~~~~i~~~~GH~~~le~p~~~~~~l 346 (351)
T TIGR01392 308 RELAKALPAAGLRVTYVEIESPYGHDAFLVETDQVEELI 346 (351)
T ss_pred HHHHHHHhhcCCceEEEEeCCCCCcchhhcCHHHHHHHH
Confidence 9999999998765 567899999999999999876
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.2e-28 Score=236.13 Aligned_cols=257 Identities=16% Similarity=0.176 Sum_probs=157.0
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCCCChh------------cHHHHHH---hh-cCCceEEEEcCCCCCCCCCCCCCC
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFGVGSF------------HYEKQLK---DL-GKDYRAWAIDFLGQGMSLPDEDPT 206 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~------------~~~~~~~---~L-~~~~~Vi~~D~rG~G~S~~~~~~~ 206 (451)
+|++|+|+..|+ .++|+||+||+..+.. .|..++. .| +++|+||++|+||||.|.. .+
T Consensus 44 ~~~~l~y~~~G~---~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~--~~- 117 (343)
T PRK08775 44 EDLRLRYELIGP---AGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLD--VP- 117 (343)
T ss_pred CCceEEEEEecc---CCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCC--CC-
Confidence 689999999985 2456777777666655 6888886 57 5789999999999998742 11
Q ss_pred CCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCE-EEEEeCcchHHHHHHHHhCCCccceEE
Q 013006 207 PRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPV-YVVGNSLGGFVAVYFAACNPHLVKGVT 285 (451)
Q Consensus 207 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v-~lvGhS~GG~val~~A~~~P~~v~~lv 285 (451)
++++++++|+.+++++++++++ +||||||||++++.+|.++|++|+++|
T Consensus 118 ------------------------------~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~Lv 167 (343)
T PRK08775 118 ------------------------------IDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLV 167 (343)
T ss_pred ------------------------------CCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEE
Confidence 6889999999999999999775 799999999999999999999999999
Q ss_pred EeccCCCCCCCCCCCCchHHhhhcCC----CCCCCChHHHHHHHH-HHHHhcCChHHHHHHHHHHhhcCCCC----hHHH
Q 013006 286 LLNATPFWGFSPNPIRSPKLARILPW----SGTFPLPASVRKLIE-FIWQKISDPESIAEVLKQVYADHATN----VDTV 356 (451)
Q Consensus 286 l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 356 (451)
++++.+... + ........... ............... ............. ..+...... ....
T Consensus 168 Li~s~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 238 (343)
T PRK08775 168 VVSGAHRAH----P-YAAAWRALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFE----ERFDAPPEVINGRVRVA 238 (343)
T ss_pred EECccccCC----H-HHHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHH----HHhCCCccccCCCccch
Confidence 999864210 0 00000000000 000000000000000 0000011111111 111111000 0000
Q ss_pred HHHHHhh----ccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHC-CCCcEEEe
Q 013006 357 FTRILET----TQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQV-PEAPYYEI 431 (451)
Q Consensus 357 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l-p~~~~~~i 431 (451)
...++.. .........+....... ......+.++++|+|+|+|++|.++|++..+++.+.+ |+++++++
T Consensus 239 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i 312 (343)
T PRK08775 239 AEDYLDAAGAQYVARTPVNAYLRLSESI------DLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVL 312 (343)
T ss_pred HHHHHHHHHHHHHHhcChhHHHHHHHHH------hhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEE
Confidence 0100000 00000000011110000 0001125679999999999999999999999998888 79999999
Q ss_pred CC-CCCCccccChHHHHhhh
Q 013006 432 SP-AGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 432 ~~-~gH~~~~e~p~~v~~~I 450 (451)
++ +||++++|+|++|++.|
T Consensus 313 ~~~aGH~~~lE~Pe~~~~~l 332 (343)
T PRK08775 313 RSPYGHDAFLKETDRIDAIL 332 (343)
T ss_pred eCCccHHHHhcCHHHHHHHH
Confidence 85 99999999999999886
|
|
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.1e-28 Score=236.59 Aligned_cols=279 Identities=14% Similarity=0.130 Sum_probs=159.3
Q ss_pred cCCeEEEEeecCCCCCCC-CcEEEecCCCCChhcHHHHH---Hhhc-CCceEEEEcCCCCCCCCCCCCC-CCCCCCCCch
Q 013006 142 KPKFNVHYEKAGCENVNS-PPVLFLPGFGVGSFHYEKQL---KDLG-KDYRAWAIDFLGQGMSLPDEDP-TPRSKEGDST 215 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~~~~-p~VlllHG~~~~~~~~~~~~---~~L~-~~~~Vi~~D~rG~G~S~~~~~~-~~~~~~~~~~ 215 (451)
.+|++|+|...|+.++.+ |+|||+||++.+...|..++ +.|. ++|+||++|+||||.|..+... .+.+
T Consensus 23 ~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~------ 96 (339)
T PRK07581 23 LPDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFN------ 96 (339)
T ss_pred cCCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCC------
Confidence 358999999999643333 55667777777777776654 4674 5799999999999999754321 0100
Q ss_pred hhhhccccCCCCCCccccccccCHHHHHHHHHH----HHHHhCCCC-EEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 216 EEKNFLWGFGDKAQPWASELAYSVDLWQDQVCY----FIKEVIREP-VYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 216 ~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~----ll~~l~~~~-v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
+.+ |....+++|+.. +++++++++ ++||||||||++|+.+|.+||++|+++|++++.
T Consensus 97 --------~~~----------~~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~ 158 (339)
T PRK07581 97 --------AAR----------FPHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGT 158 (339)
T ss_pred --------CCC----------CCceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecC
Confidence 000 111224444443 778899999 579999999999999999999999999999976
Q ss_pred CCCCCCCCCCC-chHHh----hhcCCCCCC-C-Ch-HHHHHHHHHHHHhcCChHHHHHHHHHH-hhcCC-CChHHHHHHH
Q 013006 291 PFWGFSPNPIR-SPKLA----RILPWSGTF-P-LP-ASVRKLIEFIWQKISDPESIAEVLKQV-YADHA-TNVDTVFTRI 360 (451)
Q Consensus 291 ~~~~~~~~~~~-~~~~~----~~~~~~~~~-~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~ 360 (451)
+.. .+.... ..... .-..|.... . .+ ................+ .++... +.... ...+......
T Consensus 159 ~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 232 (339)
T PRK07581 159 AKT--TPHNFVFLEGLKAALTADPAFNGGWYAEPPERGLRAHARVYAGWGFSQ----AFYRQELWRAMGYASLEDFLVGF 232 (339)
T ss_pred CCC--CHHHHHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHHHhHH----HHHHhhhccccChhhHHHHHHHH
Confidence 421 000000 00000 001111100 0 11 11111111110000001 111100 00000 0001111111
Q ss_pred Hhhc---cChhHHHHHH-HHHhcC-CCCCc-hhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCC-
Q 013006 361 LETT---QHPAAAASFA-SIMFAP-QGNLS-FREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISP- 433 (451)
Q Consensus 361 ~~~~---~~~~~~~~~~-~~~~~~-~~~~~-~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~- 433 (451)
.... ..+....... ...... ..... ..+....+.++++|||+|+|++|.++|+...+.+++.+|+++++++++
T Consensus 233 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a~l~~i~~~ 312 (339)
T PRK07581 233 WEGNFLPRDPNNLLAMLWTWQRGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPNAELRPIESI 312 (339)
T ss_pred HHHhhcccCcccHHHHHHHhhhcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEeCCC
Confidence 1111 1111111111 111100 00000 013455677899999999999999999999999999999999999998
Q ss_pred CCCCccccChHHHHhhh
Q 013006 434 AGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 434 ~gH~~~~e~p~~v~~~I 450 (451)
+||++++|+|++++..|
T Consensus 313 ~GH~~~~~~~~~~~~~~ 329 (339)
T PRK07581 313 WGHLAGFGQNPADIAFI 329 (339)
T ss_pred CCccccccCcHHHHHHH
Confidence 89999999999999775
|
|
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-27 Score=221.37 Aligned_cols=231 Identities=20% Similarity=0.258 Sum_probs=144.1
Q ss_pred CCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccC
Q 013006 159 SPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYS 238 (451)
Q Consensus 159 ~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s 238 (451)
+|+|||+||+++++..|..+++.|+ +|+|+++|+||||.|..+.. .+
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l~-~~~vi~~D~~G~G~S~~~~~--------------------------------~~ 48 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEALP-DYPRLYIDLPGHGGSAAISV--------------------------------DG 48 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHcC-CCCEEEecCCCCCCCCCccc--------------------------------cC
Confidence 4789999999999999999999995 79999999999999975321 48
Q ss_pred HHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCc-cceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCC
Q 013006 239 VDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHL-VKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPL 317 (451)
Q Consensus 239 ~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (451)
++++++|+.+++++++.+++++|||||||.+++.+|.++|+. |++++++++.+. ..+ ..... ..+...
T Consensus 49 ~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~--~~~-----~~~~~-~~~~~~--- 117 (242)
T PRK11126 49 FADVSRLLSQTLQSYNILPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPG--LQN-----AEERQ-ARWQND--- 117 (242)
T ss_pred HHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCCC--CCC-----HHHHH-HHHhhh---
Confidence 899999999999999999999999999999999999999764 999999986531 110 00000 000000
Q ss_pred hHHHHHHHHHHHHhcCChHHHHHHHHHHhhcC--CCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccC
Q 013006 318 PASVRKLIEFIWQKISDPESIAEVLKQVYADH--ATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQM 395 (451)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 395 (451)
..... .. ........+..++... ..........+......... ........... .....+....+.+
T Consensus 118 ~~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~l~~ 186 (242)
T PRK11126 118 RQWAQ--------RF-RQEPLEQVLADWYQQPVFASLNAEQRQQLVAKRSNNNG-AAVAAMLEATS-LAKQPDLRPALQA 186 (242)
T ss_pred HHHHH--------Hh-ccCcHHHHHHHHHhcchhhccCccHHHHHHHhcccCCH-HHHHHHHHhcC-cccCCcHHHHhhc
Confidence 00000 00 0000111111111000 00001111111111110000 11111111110 0011133456678
Q ss_pred CCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 396 NGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 396 i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
+++|+++|+|++|+.+. .+++. +++++.+++++||++++|+|+++++.|
T Consensus 187 i~~P~lii~G~~D~~~~-----~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i 235 (242)
T PRK11126 187 LTFPFYYLCGERDSKFQ-----ALAQQ-LALPLHVIPNAGHNAHRENPAAFAASL 235 (242)
T ss_pred cCCCeEEEEeCCcchHH-----HHHHH-hcCeEEEeCCCCCchhhhChHHHHHHH
Confidence 99999999999998552 23333 378999999999999999999999876
|
|
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-27 Score=233.71 Aligned_cols=289 Identities=15% Similarity=0.173 Sum_probs=166.3
Q ss_pred CCeEEEEeecCCCCC-CCCcEEEecCCCCChhc-------------HHHHH----HhhcCCceEEEEcCCCC-CCCCCCC
Q 013006 143 PKFNVHYEKAGCENV-NSPPVLFLPGFGVGSFH-------------YEKQL----KDLGKDYRAWAIDFLGQ-GMSLPDE 203 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~-~~p~VlllHG~~~~~~~-------------~~~~~----~~L~~~~~Vi~~D~rG~-G~S~~~~ 203 (451)
+|++|+|..+|..++ .+|+|||+||++++... |..++ ..+.++|+||++|++|+ |.|..+.
T Consensus 31 ~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~ 110 (379)
T PRK00175 31 PPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPS 110 (379)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCC
Confidence 578999999996432 36899999999999874 67776 23377899999999993 5553322
Q ss_pred CCCCCCCCCCchhhhhccccCCCCCCccccc-cccCHHHHHHHHHHHHHHhCCCC-EEEEEeCcchHHHHHHHHhCCCcc
Q 013006 204 DPTPRSKEGDSTEEKNFLWGFGDKAQPWASE-LAYSVDLWQDQVCYFIKEVIREP-VYVVGNSLGGFVAVYFAACNPHLV 281 (451)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~-~~~s~~~~a~dv~~ll~~l~~~~-v~lvGhS~GG~val~~A~~~P~~v 281 (451)
...+.. ..++... ..|+++++++++.++++++++++ ++++||||||++++.+|.++|++|
T Consensus 111 ~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v 172 (379)
T PRK00175 111 SINPDT------------------GKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRV 172 (379)
T ss_pred CCCCCC------------------CCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhh
Confidence 110000 0001000 12899999999999999999999 589999999999999999999999
Q ss_pred ceEEEeccCCCCCCCCCCCCchHHhhh---cCCCCC-C----CChHHHHHHHHHH-HHhcCChHHHHHHHHHHhhcCCC-
Q 013006 282 KGVTLLNATPFWGFSPNPIRSPKLARI---LPWSGT-F----PLPASVRKLIEFI-WQKISDPESIAEVLKQVYADHAT- 351 (451)
Q Consensus 282 ~~lvl~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~- 351 (451)
+++|++++.+................+ ..|... + ..+..-....... .........+...+.........
T Consensus 173 ~~lvl~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~ 252 (379)
T PRK00175 173 RSALVIASSARLSAQNIAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELP 252 (379)
T ss_pred hEEEEECCCcccCHHHHHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccc
Confidence 999999986531110000000000011 011100 0 0000000000100 00011111111111100000000
Q ss_pred -------ChHHHHH----HHHhhccChhHHHHHHHHHhcCC-CCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHH
Q 013006 352 -------NVDTVFT----RILETTQHPAAAASFASIMFAPQ-GNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQV 419 (451)
Q Consensus 352 -------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l 419 (451)
....... .+.... .+.............. ......+....+.+|++|+|+|+|++|.++|++..+++
T Consensus 253 ~~~~~~~~~~~~l~~~~~~~~~~~-d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~l 331 (379)
T PRK00175 253 FGFDVEFQVESYLRYQGDKFVERF-DANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREI 331 (379)
T ss_pred cCCCccchHHHHHHHHHHHHhhcc-CchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHH
Confidence 0001000 011111 1111111111111100 00000124566788999999999999999999999999
Q ss_pred HHHCCCC----cEEEeC-CCCCCccccChHHHHhhh
Q 013006 420 KRQVPEA----PYYEIS-PAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 420 ~~~lp~~----~~~~i~-~~gH~~~~e~p~~v~~~I 450 (451)
++.++++ ++.+++ ++||++++|+|++|++.|
T Consensus 332 a~~i~~a~~~~~l~~i~~~~GH~~~le~p~~~~~~L 367 (379)
T PRK00175 332 VDALLAAGADVSYAEIDSPYGHDAFLLDDPRYGRLV 367 (379)
T ss_pred HHHHHhcCCCeEEEEeCCCCCchhHhcCHHHHHHHH
Confidence 9999987 677775 899999999999999876
|
|
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-27 Score=231.73 Aligned_cols=258 Identities=13% Similarity=0.152 Sum_probs=160.9
Q ss_pred CCccceeeecCCeEEEEeecCCCC--CCCCcEEEecCCCCCh-hcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCC
Q 013006 133 PITSCFWEWKPKFNVHYEKAGCEN--VNSPPVLFLPGFGVGS-FHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPR 208 (451)
Q Consensus 133 ~~~~~~~~~~~g~~l~y~~~g~~~--~~~p~VlllHG~~~~~-~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~ 208 (451)
..+..+++..||.+|+|+.+++.. +.+++|||+||++.+. ..|..+...|++ +|+|+++|+||||.|......
T Consensus 31 ~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~--- 107 (330)
T PLN02298 31 KGSKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAY--- 107 (330)
T ss_pred ccccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCcccc---
Confidence 345667888899999999887642 2356799999998664 356677777864 899999999999999642211
Q ss_pred CCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCC------CCEEEEEeCcchHHHHHHHHhCCCccc
Q 013006 209 SKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR------EPVYVVGNSLGGFVAVYFAACNPHLVK 282 (451)
Q Consensus 209 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~------~~v~lvGhS~GG~val~~A~~~P~~v~ 282 (451)
..+++.+++|+..+++.+.. .+++|+||||||.+++.++.++|++|+
T Consensus 108 ---------------------------~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~ 160 (330)
T PLN02298 108 ---------------------------VPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFD 160 (330)
T ss_pred ---------------------------CCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccce
Confidence 15889999999999998853 379999999999999999999999999
Q ss_pred eEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHh
Q 013006 283 GVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILE 362 (451)
Q Consensus 283 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (451)
++|++++.........+ ..... . ...+............. . ..+ ....... ....+..
T Consensus 161 ~lvl~~~~~~~~~~~~~--~~~~~------------~-~~~~~~~~~~~~~~~~~-~----~~~-~~~~~~~-~~~~~~~ 218 (330)
T PLN02298 161 GAVLVAPMCKISDKIRP--PWPIP------------Q-ILTFVARFLPTLAIVPT-A----DLL-EKSVKVP-AKKIIAK 218 (330)
T ss_pred eEEEecccccCCcccCC--chHHH------------H-HHHHHHHHCCCCccccC-C----Ccc-cccccCH-HHHHHHH
Confidence 99999985321100000 00000 0 00000000000000000 0 000 0000000 0000000
Q ss_pred h----ccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC--CCcEEEeCCCCC
Q 013006 363 T----TQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP--EAPYYEISPAGH 436 (451)
Q Consensus 363 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp--~~~~~~i~~~gH 436 (451)
. +........+..... ........+.++++|+|+|+|++|.++|++.++.+++.++ ++++++++++||
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H 292 (330)
T PLN02298 219 RNPMRYNGKPRLGTVVELLR------VTDYLGKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMH 292 (330)
T ss_pred hCccccCCCccHHHHHHHHH------HHHHHHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEe
Confidence 0 000000000000000 0012334567889999999999999999999999988874 689999999999
Q ss_pred CccccChHHHHh
Q 013006 437 CPHDEVPEVCSL 448 (451)
Q Consensus 437 ~~~~e~p~~v~~ 448 (451)
.+++++|+.+.+
T Consensus 293 ~~~~e~pd~~~~ 304 (330)
T PLN02298 293 SLLFGEPDENIE 304 (330)
T ss_pred eeecCCCHHHHH
Confidence 999999976544
|
|
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.6e-27 Score=223.91 Aligned_cols=248 Identities=15% Similarity=0.151 Sum_probs=155.6
Q ss_pred ceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCch
Q 013006 137 CFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDST 215 (451)
Q Consensus 137 ~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~ 215 (451)
.++..+||.+|+|..+-+.+...+.|+|+||++.++..|..+++.|++ +|+|+++|+||||.|......
T Consensus 3 ~~~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~---------- 72 (276)
T PHA02857 3 NCMFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMM---------- 72 (276)
T ss_pred ceeecCCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCC----------
Confidence 356667999999998877543456677779999999999999999965 799999999999999642110
Q ss_pred hhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh----CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 216 EEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV----IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 216 ~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l----~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
..++.++++|+..+++.+ ..++++|+||||||++++.+|.++|++++++|++++..
T Consensus 73 --------------------~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~ 132 (276)
T PHA02857 73 --------------------IDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLV 132 (276)
T ss_pred --------------------cCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEecccc
Confidence 135666677777766654 34689999999999999999999999999999999853
Q ss_pred CCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhcc-ChhHH
Q 013006 292 FWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQ-HPAAA 370 (451)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 370 (451)
... . . .....+........ .............+. ............... .....
T Consensus 133 ~~~----~--~-------------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 187 (276)
T PHA02857 133 NAE----A--V-------------PRLNLLAAKLMGIF---YPNKIVGKLCPESVS---RDMDEVYKYQYDPLVNHEKIK 187 (276)
T ss_pred ccc----c--c-------------cHHHHHHHHHHHHh---CCCCccCCCCHhhcc---CCHHHHHHHhcCCCccCCCcc
Confidence 210 0 0 00000000000000 000000000000000 000000000000000 00000
Q ss_pred HHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHC-CCCcEEEeCCCCCCccccChH
Q 013006 371 ASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQV-PEAPYYEISPAGHCPHDEVPE 444 (451)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l-p~~~~~~i~~~gH~~~~e~p~ 444 (451)
..+...... ...+....+.++++|||+|+|++|.++|++.++++.+.+ +++++.+++++||.++.|+++
T Consensus 188 ~~~~~~~~~-----~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~ 257 (276)
T PHA02857 188 AGFASQVLK-----ATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDE 257 (276)
T ss_pred HHHHHHHHH-----HHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCchh
Confidence 000000000 012334567789999999999999999999999998887 468999999999999999874
|
|
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.3e-26 Score=221.22 Aligned_cols=129 Identities=19% Similarity=0.231 Sum_probs=106.7
Q ss_pred ceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCch
Q 013006 137 CFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDST 215 (451)
Q Consensus 137 ~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~ 215 (451)
..+...+|.+++|..+++.+ .+++|||+||++.+...|..++..| ..+|+|+++|+||||.|+........
T Consensus 33 ~~~~~~~g~~l~~~~~~~~~-~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~------- 104 (330)
T PRK10749 33 AEFTGVDDIPIRFVRFRAPH-HDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHR------- 104 (330)
T ss_pred eEEEcCCCCEEEEEEccCCC-CCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCc-------
Confidence 45556789999999998643 4578999999999998999999877 56899999999999999753221100
Q ss_pred hhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh----CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 216 EEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV----IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 216 ~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l----~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
...++++++++|+..+++++ +..+++++||||||.+++.+|.++|++|+++|+++|..
T Consensus 105 ------------------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~ 166 (330)
T PRK10749 105 ------------------GHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMF 166 (330)
T ss_pred ------------------CccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchh
Confidence 00158999999999999987 66899999999999999999999999999999998753
|
|
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-26 Score=219.42 Aligned_cols=265 Identities=19% Similarity=0.193 Sum_probs=160.5
Q ss_pred cCCeEEEEeecCCCCCCCCcEEEecCCCCChhc-HHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhh
Q 013006 142 KPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFH-YEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKN 219 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~-~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~ 219 (451)
.+|.++.|...+... .+++|||+||++++... |..+...|.+ +|+|+++|+||||.|..+.....
T Consensus 9 ~~~~~~~~~~~~~~~-~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~------------ 75 (288)
T TIGR01250 9 VDGGYHLFTKTGGEG-EKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDE------------ 75 (288)
T ss_pred CCCCeEEEEeccCCC-CCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccc------------
Confidence 346678888777532 36899999998665544 5555566665 79999999999999975432110
Q ss_pred ccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCC
Q 013006 220 FLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNP 299 (451)
Q Consensus 220 ~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~ 299 (451)
.++++++++++.+++++++.++++++||||||.+++.+|.++|++|+++|++++.... +
T Consensus 76 ----------------~~~~~~~~~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~-----~ 134 (288)
T TIGR01250 76 ----------------LWTIDYFVDELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSA-----P 134 (288)
T ss_pred ----------------cccHHHHHHHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccc-----h
Confidence 1689999999999999999999999999999999999999999999999999875310 0
Q ss_pred CCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhh---cCCCChHHHHHHHHhhccChhHHHHHHHH
Q 013006 300 IRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYA---DHATNVDTVFTRILETTQHPAAAASFASI 376 (451)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (451)
........... ... ......+.................+...+. ................. . ..+...
T Consensus 135 ~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~ 205 (288)
T TIGR01250 135 EYVKELNRLRK---ELP-PEVRAAIKRCEASGDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGM-N----TNVYNI 205 (288)
T ss_pred HHHHHHHHHHh---hcC-hhHHHHHHHHHhccCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhcc-C----HHHHhc
Confidence 00000000000 000 000000000000000001111111111110 00000001111110000 0 000000
Q ss_pred Hhc-----CCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 377 MFA-----PQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 377 ~~~-----~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
+.. ........+....+.++++|+++++|++|.+ +++..+.+++.++++++++++++||++++|+|+++++.|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i 283 (288)
T TIGR01250 206 MQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM-TPEAAREMQELIAGSRLVVFPDGSHMTMIEDPEVYFKLL 283 (288)
T ss_pred ccCCccccccccccccCHHHHhhccCCCEEEEecCCCcc-CHHHHHHHHHhccCCeEEEeCCCCCCcccCCHHHHHHHH
Confidence 000 0001111233456678999999999999985 677888899999999999999999999999999999886
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.7e-27 Score=221.13 Aligned_cols=252 Identities=18% Similarity=0.179 Sum_probs=157.1
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhcc
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFL 221 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~ 221 (451)
+|-+++|.+-+ .++|+|||+||++.+...|..++..|. ++|+|+++|+||||.|......
T Consensus 5 ~~~~~~~~~~~---~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~---------------- 65 (273)
T PLN02211 5 NGEEVTDMKPN---RQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADS---------------- 65 (273)
T ss_pred ccccccccccc---CCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCccc----------------
Confidence 56777777732 357899999999999999999999996 4899999999999987532211
Q ss_pred ccCCCCCCccccccccCHHHHHHHHHHHHHHhC-CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCC
Q 013006 222 WGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI-REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPI 300 (451)
Q Consensus 222 w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~-~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~ 300 (451)
.++++++++++.++++++. .++++||||||||++++.++.++|++|+++|++++.... ...
T Consensus 66 --------------~~~~~~~~~~l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~----~g~ 127 (273)
T PLN02211 66 --------------VTTFDEYNKPLIDFLSSLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLK----LGF 127 (273)
T ss_pred --------------CCCHHHHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCC----CCC
Confidence 1699999999999999985 589999999999999999999999999999999874320 000
Q ss_pred CchHHhhhcCCCCCCCChHHHHHHHHHHHH--hc---CChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHH
Q 013006 301 RSPKLARILPWSGTFPLPASVRKLIEFIWQ--KI---SDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFAS 375 (451)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (451)
... .. +...++............+. .. .......+.....+.... . +.... +......+...
T Consensus 128 ~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~-~~~~~~~~~~~----- 194 (273)
T PLN02211 128 QTD--ED---MKDGVPDLSEFGDVYELGFGLGPDQPPTSAIIKKEFRRKILYQMS-P-QEDST-LAAMLLRPGPI----- 194 (273)
T ss_pred CHH--HH---HhccccchhhhccceeeeeccCCCCCCceeeeCHHHHHHHHhcCC-C-HHHHH-HHHHhcCCcCc-----
Confidence 000 00 00000000000000000000 00 000000011111111110 0 00000 00000000000
Q ss_pred HHhcCCCCCchhHHhhhccCC-CCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhhC
Q 013006 376 IMFAPQGNLSFREALSRCQMN-GVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCLL 451 (451)
Q Consensus 376 ~~~~~~~~~~~~~~~~~l~~i-~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~Il 451 (451)
..+..........++ ++|+++|+|++|..+|++.++.+.+.+++++++.++ +||.+++++|+++++.|+
T Consensus 195 ------~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~~~~~~l~-~gH~p~ls~P~~~~~~i~ 264 (273)
T PLN02211 195 ------LALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPPSQVYELE-SDHSPFFSTPFLLFGLLI 264 (273)
T ss_pred ------cccccccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCCccEEEEEC-CCCCccccCHHHHHHHHH
Confidence 000000111112334 789999999999999999999999999999999996 899999999999998763
|
|
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.7e-26 Score=224.19 Aligned_cols=274 Identities=17% Similarity=0.282 Sum_probs=162.3
Q ss_pred eeeecCCe--EEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCch
Q 013006 138 FWEWKPKF--NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDST 215 (451)
Q Consensus 138 ~~~~~~g~--~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~ 215 (451)
++...+|. ++++....+. +++|+|||+||++.+...|...+..|+++|+|+++|+||||.|+.+.... .
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~-~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~~--~------ 153 (402)
T PLN02894 83 WFRSASNEPRFINTVTFDSK-EDAPTLVMVHGYGASQGFFFRNFDALASRFRVIAIDQLGWGGSSRPDFTC--K------ 153 (402)
T ss_pred ceecccCcCCeEEEEEecCC-CCCCEEEEECCCCcchhHHHHHHHHHHhCCEEEEECCCCCCCCCCCCccc--c------
Confidence 33334443 6666555432 36799999999999999999999999889999999999999997542110 0
Q ss_pred hhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCC
Q 013006 216 EEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGF 295 (451)
Q Consensus 216 ~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~ 295 (451)
......+.+++++.++++.++.++++|+||||||.+++.+|.++|++|+++|++++.++...
T Consensus 154 ------------------~~~~~~~~~~~~i~~~~~~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~ 215 (402)
T PLN02894 154 ------------------STEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSE 215 (402)
T ss_pred ------------------cHHHHHHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCC
Confidence 00012345678888999999999999999999999999999999999999999998643221
Q ss_pred CCCCCCchHHhhhc-CCCCCCCChHHHHHHHHHHHHhcCC------------hHHHHHHHHHHhhcCC------CChHHH
Q 013006 296 SPNPIRSPKLARIL-PWSGTFPLPASVRKLIEFIWQKISD------------PESIAEVLKQVYADHA------TNVDTV 356 (451)
Q Consensus 296 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~------~~~~~~ 356 (451)
... ......... .|. ..+...++..... +..........+.... ......
T Consensus 216 ~~~--~~~~~~~~~~~~~---------~~~~~~~~~~~~~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~ 284 (402)
T PLN02894 216 SDD--KSEWLTKFRATWK---------GAVLNHLWESNFTPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKL 284 (402)
T ss_pred cch--hHHHHhhcchhHH---------HHHHHHHhhcCCCHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhH
Confidence 110 000010000 000 0000000000000 1111111111111110 000111
Q ss_pred H-HHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC-CCcEEEeCCC
Q 013006 357 F-TRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP-EAPYYEISPA 434 (451)
Q Consensus 357 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp-~~~~~~i~~~ 434 (451)
+ +.+................+.... .....+....+.++++|+++|+|++|.+.+ ....++.+..+ .+++++++++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~I~vP~liI~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~a 362 (402)
T PLN02894 285 LTDYVYHTLAAKASGELCLKYIFSFG-AFARKPLLESASEWKVPTTFIYGRHDWMNY-EGAVEARKRMKVPCEIIRVPQG 362 (402)
T ss_pred HHHHHHHhhcCCCchHHHHHHhccCc-hhhcchHhhhcccCCCCEEEEEeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCC
Confidence 1 111111111111111111111111 112234556678899999999999998765 55555555554 5889999999
Q ss_pred CCCccccChHHHHhhhC
Q 013006 435 GHCPHDEVPEVCSLCLL 451 (451)
Q Consensus 435 gH~~~~e~p~~v~~~Il 451 (451)
||++++|+|++|++.|+
T Consensus 363 GH~~~~E~P~~f~~~l~ 379 (402)
T PLN02894 363 GHFVFLDNPSGFHSAVL 379 (402)
T ss_pred CCeeeccCHHHHHHHHH
Confidence 99999999999998763
|
|
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.3e-26 Score=223.42 Aligned_cols=247 Identities=21% Similarity=0.258 Sum_probs=162.7
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccc
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLW 222 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w 222 (451)
++.+++|...|++ ++++|||+||++++...|..++..|.++|+|+++|+||||.|......
T Consensus 117 ~~~~i~~~~~g~~--~~~~vl~~HG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~----------------- 177 (371)
T PRK14875 117 GGRTVRYLRLGEG--DGTPVVLIHGFGGDLNNWLFNHAALAAGRPVIALDLPGHGASSKAVGA----------------- 177 (371)
T ss_pred cCcEEEEecccCC--CCCeEEEECCCCCccchHHHHHHHHhcCCEEEEEcCCCCCCCCCCCCC-----------------
Confidence 5788999988863 468999999999999999999999988899999999999999643221
Q ss_pred cCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCc
Q 013006 223 GFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRS 302 (451)
Q Consensus 223 ~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~ 302 (451)
++++++++++..+++.++.++++++|||+||.+++.+|.++|++++++|++++...... ...
T Consensus 178 --------------~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~----~~~ 239 (371)
T PRK14875 178 --------------GSLDELAAAVLAFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPE----ING 239 (371)
T ss_pred --------------CCHHHHHHHHHHHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcc----cch
Confidence 68999999999999999999999999999999999999999999999999987532110 000
Q ss_pred hHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhc-CC
Q 013006 303 PKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFA-PQ 381 (451)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 381 (451)
.....+... ..... +...+...+..........................+...... ..
T Consensus 240 ~~~~~~~~~----~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (371)
T PRK14875 240 DYIDGFVAA----ESRRE-----------------LKPVLELLFADPALVTRQMVEDLLKYKRLDGVDDALRALADALFA 298 (371)
T ss_pred hHHHHhhcc----cchhH-----------------HHHHHHHHhcChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhcc
Confidence 000000000 00000 111111111110000011111111111101111111111100 00
Q ss_pred CCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 382 GNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 382 ~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
......+....+.++++|+|+++|++|.++|++..+.+ .+++++.+++++||++++++|+++++.|
T Consensus 299 ~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l---~~~~~~~~~~~~gH~~~~e~p~~~~~~i 364 (371)
T PRK14875 299 GGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGL---PDGVAVHVLPGAGHMPQMEAAADVNRLL 364 (371)
T ss_pred CcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhc---cCCCeEEEeCCCCCChhhhCHHHHHHHH
Confidence 11111234445677899999999999999998776544 3468899999999999999999999876
|
|
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-25 Score=217.04 Aligned_cols=125 Identities=21% Similarity=0.224 Sum_probs=102.6
Q ss_pred ccceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013006 135 TSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGD 213 (451)
Q Consensus 135 ~~~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~ 213 (451)
...++...+|.+|+|...|++ ++++|||+||++++...+ .+...+ .++|+|+++|+||||.|.......
T Consensus 5 ~~~~~~~~~~~~l~y~~~g~~--~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~------- 74 (306)
T TIGR01249 5 VSGYLNVSDNHQLYYEQSGNP--DGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLE------- 74 (306)
T ss_pred cCCeEEcCCCcEEEEEECcCC--CCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCcc-------
Confidence 345677778999999999853 467899999987765543 334444 457999999999999997432211
Q ss_pred chhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 214 STEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 214 ~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
.++.+++++|+..+++++++++++++||||||.+++.++.++|++|+++|++++..
T Consensus 75 ----------------------~~~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 75 ----------------------ENTTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred ----------------------cCCHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeecccc
Confidence 15788999999999999999999999999999999999999999999999998753
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.2e-26 Score=208.87 Aligned_cols=243 Identities=21% Similarity=0.293 Sum_probs=151.8
Q ss_pred CcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCH
Q 013006 160 PPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSV 239 (451)
Q Consensus 160 p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~ 239 (451)
|+|||+||++++...|..++..|+++|+|+++|+||+|.|..+.... .+++
T Consensus 2 ~~vv~~hG~~~~~~~~~~~~~~L~~~~~v~~~d~~g~G~s~~~~~~~-----------------------------~~~~ 52 (251)
T TIGR03695 2 PVLVFLHGFLGSGADWQALIELLGPHFRCLAIDLPGHGSSQSPDEIE-----------------------------RYDF 52 (251)
T ss_pred CEEEEEcCCCCchhhHHHHHHHhcccCeEEEEcCCCCCCCCCCCccC-----------------------------hhhH
Confidence 78999999999999999999999988999999999999996543211 2688
Q ss_pred HHHHHH-HHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCCh
Q 013006 240 DLWQDQ-VCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLP 318 (451)
Q Consensus 240 ~~~a~d-v~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (451)
++++++ +..+++.++.++++++|||+||.+++.+|.++|++|++++++++.+..... ......+....
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~--------~~~~~~~~~~~--- 121 (251)
T TIGR03695 53 EEAAQDILATLLDQLGIEPFFLVGYSMGGRIALYYALQYPERVQGLILESGSPGLATE--------EERAARRQNDE--- 121 (251)
T ss_pred HHHHHHHHHHHHHHcCCCeEEEEEeccHHHHHHHHHHhCchheeeeEEecCCCCcCch--------Hhhhhhhhcch---
Confidence 999999 888889998899999999999999999999999999999999976421100 00000000000
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHH-HhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccCCC
Q 013006 319 ASVRKLIEFIWQKISDPESIAEVLKQ-VYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNG 397 (451)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 397 (451)
.....+. . ............. .+.............+......... ......+.... .....+....+.+++
T Consensus 122 ~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~ 194 (251)
T TIGR03695 122 QLAQRFE----Q-EGLEAFLDDWYQQPLFASQKNLPPEQRQALRAKRLANNP-EGLAKMLRATG-LGKQPSLWPKLQALT 194 (251)
T ss_pred hhhhHHH----h-cCccHHHHHHhcCceeeecccCChHHhHHHHHhcccccc-hHHHHHHHHhh-hhcccchHHHhhCCC
Confidence 0000000 0 0000000000000 0000000001111111111000000 00111110000 000112234456789
Q ss_pred CCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 398 VPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 398 ~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
+|+++++|++|..++ ...+.+.+..+++++.+++++||++++|+|+++++.|
T Consensus 195 ~P~l~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~i 246 (251)
T TIGR03695 195 IPVLYLCGEKDEKFV-QIAKEMQKLLPNLTLVIIANAGHNIHLENPEAFAKIL 246 (251)
T ss_pred CceEEEeeCcchHHH-HHHHHHHhcCCCCcEEEEcCCCCCcCccChHHHHHHH
Confidence 999999999998764 5677788889999999999999999999999999876
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.5e-24 Score=242.82 Aligned_cols=257 Identities=21% Similarity=0.276 Sum_probs=161.3
Q ss_pred EEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCC
Q 013006 147 VHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGD 226 (451)
Q Consensus 147 l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~ 226 (451)
++|...|.. +.+++|||+||++++...|..++..|.++|+|+++|+||||.|.........
T Consensus 1360 i~~~~~G~~-~~~~~vVllHG~~~s~~~w~~~~~~L~~~~rVi~~Dl~G~G~S~~~~~~~~~------------------ 1420 (1655)
T PLN02980 1360 IKVHEVGQN-AEGSVVLFLHGFLGTGEDWIPIMKAISGSARCISIDLPGHGGSKIQNHAKET------------------ 1420 (1655)
T ss_pred EEEEecCCC-CCCCeEEEECCCCCCHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCccccccc------------------
Confidence 566677742 2468999999999999999999999988899999999999999753221000
Q ss_pred CCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHh
Q 013006 227 KAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLA 306 (451)
Q Consensus 227 ~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 306 (451)
.....++++++++++..++++++.++++|+||||||.+++.+|.++|++|+++|++++.+... .....
T Consensus 1421 -----~~~~~~si~~~a~~l~~ll~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~-------~~~~~ 1488 (1655)
T PLN02980 1421 -----QTEPTLSVELVADLLYKLIEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLK-------DEVAR 1488 (1655)
T ss_pred -----cccccCCHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccC-------chHHH
Confidence 001127899999999999999999999999999999999999999999999999998754211 00000
Q ss_pred hhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcC---CCChHHHHHHHHh-hccChhHHHHHHHHHhcCCC
Q 013006 307 RILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADH---ATNVDTVFTRILE-TTQHPAAAASFASIMFAPQG 382 (451)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 382 (451)
...... .......+. ......++..++... .......+..... ...... ...+...+....
T Consensus 1489 ~~~~~~----~~~~~~~l~---------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~- 1553 (1655)
T PLN02980 1489 KIRSAK----DDSRARMLI---------DHGLEIFLENWYSGELWKSLRNHPHFNKIVASRLLHKD-VPSLAKLLSDLS- 1553 (1655)
T ss_pred HHHhhh----hhHHHHHHH---------hhhHHHHHHHhccHHHhhhhccCHHHHHHHHHHHhcCC-HHHHHHHHHHhh-
Confidence 000000 000000000 000111111111100 0000011111111 010100 011111111000
Q ss_pred CCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC------------CcEEEeCCCCCCccccChHHHHhhh
Q 013006 383 NLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE------------APYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 383 ~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~------------~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
.....+..+.+.++++|+|+|+|++|..++ ..++++.+.+++ +++++++++||++++|+|+++++.|
T Consensus 1554 ~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I 1632 (1655)
T PLN02980 1554 IGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRAL 1632 (1655)
T ss_pred hcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHH
Confidence 001123345678899999999999999875 667778877776 4799999999999999999999876
|
|
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.8e-24 Score=208.20 Aligned_cols=296 Identities=15% Similarity=0.116 Sum_probs=173.8
Q ss_pred CCeEEEEeecCCCCCC-CCcEEEecCCCCChhc-------------HHHHHHh---h-cCCceEEEEcCCCCCCCCCCC-
Q 013006 143 PKFNVHYEKAGCENVN-SPPVLFLPGFGVGSFH-------------YEKQLKD---L-GKDYRAWAIDFLGQGMSLPDE- 203 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~-~p~VlllHG~~~~~~~-------------~~~~~~~---L-~~~~~Vi~~D~rG~G~S~~~~- 203 (451)
+.++|.|+.+|..|++ .+.||+.|++.+++.. |+.++-. | .+.|.||++|..|-|.|..+.
T Consensus 39 ~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~ 118 (389)
T PRK06765 39 PDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNV 118 (389)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCC
Confidence 4689999999986654 4788888999886532 6666632 4 346999999999998754321
Q ss_pred -CCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEE-EEEeCcchHHHHHHHHhCCCcc
Q 013006 204 -DPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVY-VVGNSLGGFVAVYFAACNPHLV 281 (451)
Q Consensus 204 -~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~-lvGhS~GG~val~~A~~~P~~v 281 (451)
...|.+.. ++....|+- +...++++++++++..+++++++++++ +|||||||++++.+|.++|++|
T Consensus 119 g~tgp~s~~----p~tg~~~~~--------~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v 186 (389)
T PRK06765 119 ITTGPASIN----PKTGKPYGM--------DFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMV 186 (389)
T ss_pred CCCCCCCCC----cCCCCccCC--------CCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhh
Confidence 10000000 000001110 111389999999999999999999987 9999999999999999999999
Q ss_pred ceEEEeccCCCCCCCCCCCCch----HHhhhcCCCCCCC----Ch-HHHHHHHHHHHHhcCChHHHHHHHHHHhhcCC--
Q 013006 282 KGVTLLNATPFWGFSPNPIRSP----KLARILPWSGTFP----LP-ASVRKLIEFIWQKISDPESIAEVLKQVYADHA-- 350 (451)
Q Consensus 282 ~~lvl~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 350 (451)
+++|++++.+............ .+.....|..... .| ..+.............++.+...+.+......
T Consensus 187 ~~lv~ia~~~~~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~ 266 (389)
T PRK06765 187 ERMIGVIGNPQNDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDP 266 (389)
T ss_pred heEEEEecCCCCChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccc
Confidence 9999999865311100000000 0111112221110 11 11222222222222233332221111000000
Q ss_pred -------CChHHHHHHHHhh---ccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHH
Q 013006 351 -------TNVDTVFTRILET---TQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVK 420 (451)
Q Consensus 351 -------~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~ 420 (451)
...+......... ..++.....+...+..........+..+.+.++++|+|+|+|++|.++|++..++++
T Consensus 267 ~~~~~~~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la 346 (389)
T PRK06765 267 YEKVSTLTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMV 346 (389)
T ss_pred cccccchhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHH
Confidence 0111111111111 111222222222222111111112456677889999999999999999999999999
Q ss_pred HHCC----CCcEEEeCC-CCCCccccChHHHHhhh
Q 013006 421 RQVP----EAPYYEISP-AGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 421 ~~lp----~~~~~~i~~-~gH~~~~e~p~~v~~~I 450 (451)
+.+| +++++++++ +||++++|+|+++++.|
T Consensus 347 ~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I 381 (389)
T PRK06765 347 DILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKI 381 (389)
T ss_pred HHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHH
Confidence 9886 588999985 89999999999999876
|
|
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.4e-23 Score=205.49 Aligned_cols=258 Identities=14% Similarity=0.145 Sum_probs=161.5
Q ss_pred CCccceeeecCCeEEEEeecCCCC-CCCCcEEEecCCCCChhcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCC
Q 013006 133 PITSCFWEWKPKFNVHYEKAGCEN-VNSPPVLFLPGFGVGSFHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSK 210 (451)
Q Consensus 133 ~~~~~~~~~~~g~~l~y~~~g~~~-~~~p~VlllHG~~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~ 210 (451)
...+..+...++..++|..+.+.. +..++|||+||++++...|..++..|+ ++|+|+++|+||||.|+.....
T Consensus 109 ~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~----- 183 (395)
T PLN02652 109 RWATSLFYGARRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGY----- 183 (395)
T ss_pred eEEEEEEECCCCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCC-----
Confidence 455566667788999999998742 345789999999999999999999995 5899999999999999743211
Q ss_pred CCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCC----CCEEEEEeCcchHHHHHHHHhCCC---ccce
Q 013006 211 EGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR----EPVYVVGNSLGGFVAVYFAACNPH---LVKG 283 (451)
Q Consensus 211 ~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~----~~v~lvGhS~GG~val~~A~~~P~---~v~~ 283 (451)
..+++.+++|+..+++.+.. .+++++||||||.+++.++. +|+ ++++
T Consensus 184 -------------------------~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~g 237 (395)
T PLN02652 184 -------------------------VPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEG 237 (395)
T ss_pred -------------------------CcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccce
Confidence 15788899999999988753 47999999999999997764 664 8999
Q ss_pred EEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhh
Q 013006 284 VTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILET 363 (451)
Q Consensus 284 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (451)
+|+.+|... ..+. .+... ....+......... +....... .....+.......+...
T Consensus 238 lVL~sP~l~--~~~~---~~~~~-------------~~~~l~~~~~p~~~----~~~~~~~~-~~~s~~~~~~~~~~~dp 294 (395)
T PLN02652 238 IVLTSPALR--VKPA---HPIVG-------------AVAPIFSLVAPRFQ----FKGANKRG-IPVSRDPAALLAKYSDP 294 (395)
T ss_pred EEEECcccc--cccc---hHHHH-------------HHHHHHHHhCCCCc----ccCccccc-CCcCCCHHHHHHHhcCC
Confidence 999987521 1000 00000 00000000000000 00000000 00000000000000000
Q ss_pred ccChhH--HHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC--CcEEEeCCCCCCcc
Q 013006 364 TQHPAA--AASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE--APYYEISPAGHCPH 439 (451)
Q Consensus 364 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~--~~~~~i~~~gH~~~ 439 (451)
...... ......... ........+.++++|+|+++|++|.++|++.++++.+.+++ .+++++++++|.++
T Consensus 295 ~~~~g~i~~~~~~~~~~------~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~ 368 (395)
T PLN02652 295 LVYTGPIRVRTGHEILR------ISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLL 368 (395)
T ss_pred CcccCCchHHHHHHHHH------HHHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEec
Confidence 000000 000000000 00123445678999999999999999999999999888654 78999999999987
Q ss_pred cc-ChHHHHhhh
Q 013006 440 DE-VPEVCSLCL 450 (451)
Q Consensus 440 ~e-~p~~v~~~I 450 (451)
.| +++++.+.|
T Consensus 369 ~e~~~e~v~~~I 380 (395)
T PLN02652 369 FEPEREEVGRDI 380 (395)
T ss_pred cCCCHHHHHHHH
Confidence 77 788888765
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.1e-24 Score=221.58 Aligned_cols=268 Identities=18% Similarity=0.159 Sum_probs=158.3
Q ss_pred ceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchh
Q 013006 137 CFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTE 216 (451)
Q Consensus 137 ~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~ 216 (451)
.++...+|.+|+|..+|+. ++|+|||+||++++...|..+++.|+++|+|+++|+||||.|..+....
T Consensus 5 ~~~~~~~g~~l~~~~~g~~--~~~~ivllHG~~~~~~~w~~~~~~L~~~~~Vi~~D~~G~G~S~~~~~~~---------- 72 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGDP--DRPTVVLVHGYPDNHEVWDGVAPLLADRFRVVAYDVRGAGRSSAPKRTA---------- 72 (582)
T ss_pred EEEEeeCCEEEEEEEcCCC--CCCeEEEEcCCCchHHHHHHHHHHhhcceEEEEecCCCCCCCCCCCccc----------
Confidence 4455678999999999863 5789999999999999999999999889999999999999997543221
Q ss_pred hhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCC-EEEEEeCcchHHHHHHHHh--CCCccceEEEeccCCCC
Q 013006 217 EKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREP-VYVVGNSLGGFVAVYFAAC--NPHLVKGVTLLNATPFW 293 (451)
Q Consensus 217 ~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~-v~lvGhS~GG~val~~A~~--~P~~v~~lvl~~~~~~~ 293 (451)
.++++++++|+..++++++..+ ++|+||||||++++.++.+ .|+++..++.+++....
T Consensus 73 -------------------~~~~~~~a~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~ 133 (582)
T PRK05855 73 -------------------AYTLARLADDFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLD 133 (582)
T ss_pred -------------------ccCHHHHHHHHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchH
Confidence 2799999999999999998765 9999999999999988776 24455555554432100
Q ss_pred CCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHH----HhcCChHH-----HHHHHHHHhhcCCCC-hHHHHHHHHhh
Q 013006 294 GFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIW----QKISDPES-----IAEVLKQVYADHATN-VDTVFTRILET 363 (451)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~ 363 (451)
. .......................+..... .....+.. ....+...+...... ..........
T Consensus 134 ----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 206 (582)
T PRK05855 134 ----H--VGFWLRSGLRRPTPRRLARALGQLLRSWYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTL- 206 (582)
T ss_pred ----H--HHHHHhhcccccchhhhhHHHHHHhhhHHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhh-
Confidence 0 00000000000000000000000000000 00000000 000000000000000 0000000000
Q ss_pred ccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccCh
Q 013006 364 TQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVP 443 (451)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p 443 (451)
.........+.... ........+..+++|+++|+|++|.++|+...+.+++.+++.++++++ +||++++|+|
T Consensus 207 ---~~~~~~~~~~~~~~----~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~-~gH~~~~e~p 278 (582)
T PRK05855 207 ---SDGAHGVKLYRANM----IRSLSRPRERYTDVPVQLIVPTGDPYVRPALYDDLSRWVPRLWRREIK-AGHWLPMSHP 278 (582)
T ss_pred ---ccccchHHHHHhhh----hhhhccCccCCccCceEEEEeCCCcccCHHHhccccccCCcceEEEcc-CCCcchhhCh
Confidence 00000000000000 000111124458999999999999999999999999989988888885 6999999999
Q ss_pred HHHHhhh
Q 013006 444 EVCSLCL 450 (451)
Q Consensus 444 ~~v~~~I 450 (451)
+++++.|
T Consensus 279 ~~~~~~i 285 (582)
T PRK05855 279 QVLAAAV 285 (582)
T ss_pred hHHHHHH
Confidence 9998776
|
|
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.6e-23 Score=196.01 Aligned_cols=255 Identities=19% Similarity=0.244 Sum_probs=163.3
Q ss_pred CCccceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhh-cCCceEEEEcCCCCCCCCC-CCCCCCCCC
Q 013006 133 PITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLP-DEDPTPRSK 210 (451)
Q Consensus 133 ~~~~~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L-~~~~~Vi~~D~rG~G~S~~-~~~~~~~~~ 210 (451)
.....++...||..++|..+-+.++...+||++||++.+...|..++..| .+||.|+++|+||||.|.+ ....
T Consensus 8 ~~~~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~----- 82 (298)
T COG2267 8 TRTEGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGH----- 82 (298)
T ss_pred ccccceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCC-----
Confidence 34566777889999999999887555579999999999999999999999 5589999999999999974 1111
Q ss_pred CCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhC----CCCEEEEEeCcchHHHHHHHHhCCCccceEEE
Q 013006 211 EGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI----REPVYVVGNSLGGFVAVYFAACNPHLVKGVTL 286 (451)
Q Consensus 211 ~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~----~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl 286 (451)
.-+++++.+|+..+++... ..+++++||||||.|++.++.+++.+|+++||
T Consensus 83 -------------------------~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vL 137 (298)
T COG2267 83 -------------------------VDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVL 137 (298)
T ss_pred -------------------------chhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEE
Confidence 1468999999999999885 37899999999999999999999999999999
Q ss_pred eccCCCCCCCCCCCCchHHhhhcC----CCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHh
Q 013006 287 LNATPFWGFSPNPIRSPKLARILP----WSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILE 362 (451)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (451)
.+|.-.... ............. +...+.... . . ................+.+..
T Consensus 138 ssP~~~l~~--~~~~~~~~~~~~~~~~~~~p~~~~~~-----------------~-~--~~~~~~~~~sr~~~~~~~~~~ 195 (298)
T COG2267 138 SSPALGLGG--AILRLILARLALKLLGRIRPKLPVDS-----------------N-L--LEGVLTDDLSRDPAEVAAYEA 195 (298)
T ss_pred ECccccCCh--hHHHHHHHHHhcccccccccccccCc-----------------c-c--ccCcCcchhhcCHHHHHHHhc
Confidence 998532110 0000000000000 000000000 0 0 000000000001111111111
Q ss_pred hcc--C-hhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCC-hHHHHHHHHHC--CCCcEEEeCCCCC
Q 013006 363 TTQ--H-PAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVK-PVWGLQVKRQV--PEAPYYEISPAGH 436 (451)
Q Consensus 363 ~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~-~~~~~~l~~~l--p~~~~~~i~~~gH 436 (451)
.-. . ......+...+.... .........+++|+|+++|++|.+++ .+...++.+.. +++++++++|+.|
T Consensus 196 dP~~~~~~~~~~w~~~~~~a~~-----~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~H 270 (298)
T COG2267 196 DPLIGVGGPVSRWVDLALLAGR-----VPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYH 270 (298)
T ss_pred CCccccCCccHHHHHHHHHhhc-----ccchhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcch
Confidence 110 0 000111111111111 12233345689999999999999999 67777776655 5678999999999
Q ss_pred CccccChH
Q 013006 437 CPHDEVPE 444 (451)
Q Consensus 437 ~~~~e~p~ 444 (451)
.++.|.+.
T Consensus 271 e~~~E~~~ 278 (298)
T COG2267 271 ELLNEPDR 278 (298)
T ss_pred hhhcCcch
Confidence 99988654
|
|
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.9e-23 Score=188.17 Aligned_cols=247 Identities=17% Similarity=0.201 Sum_probs=161.7
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcC--CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGK--DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASEL 235 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 235 (451)
..|+++++||+.++...|..+...|++ +..|+++|.|.||.|.....
T Consensus 51 ~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~------------------------------- 99 (315)
T KOG2382|consen 51 RAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITV------------------------------- 99 (315)
T ss_pred CCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCccccc-------------------------------
Confidence 579999999999999999999999976 58999999999999965432
Q ss_pred ccCHHHHHHHHHHHHHHhC----CCCEEEEEeCcch-HHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcC
Q 013006 236 AYSVDLWQDQVCYFIKEVI----REPVYVVGNSLGG-FVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILP 310 (451)
Q Consensus 236 ~~s~~~~a~dv~~ll~~l~----~~~v~lvGhS~GG-~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 310 (451)
++...+++|+..|++..+ ..+++++|||||| .+++..+...|+.+..+|+++.+|........ ....+-..+.
T Consensus 100 -h~~~~ma~dv~~Fi~~v~~~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~-e~~e~i~~m~ 177 (315)
T KOG2382|consen 100 -HNYEAMAEDVKLFIDGVGGSTRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYG-EYRELIKAMI 177 (315)
T ss_pred -cCHHHHHHHHHHHHHHcccccccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccc-hHHHHHHHHH
Confidence 689999999999999985 5789999999999 88888889999999999999988741111111 1111111111
Q ss_pred CCCCC-CChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHH-HHHHHHHhcCCCCCchhH
Q 013006 311 WSGTF-PLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAA-ASFASIMFAPQGNLSFRE 388 (451)
Q Consensus 311 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 388 (451)
..... ..-.....+...+.. ...+..+.+++...+...... . .+.+..+.... ..+..+. ...+..
T Consensus 178 ~~d~~~~~~~~rke~~~~l~~-~~~d~~~~~fi~~nl~~~~~~--~----s~~w~~nl~~i~~~~~~~~-----~~s~~~ 245 (315)
T KOG2382|consen 178 QLDLSIGVSRGRKEALKSLIE-VGFDNLVRQFILTNLKKSPSD--G----SFLWRVNLDSIASLLDEYE-----ILSYWA 245 (315)
T ss_pred hccccccccccHHHHHHHHHH-HhcchHHHHHHHHhcCcCCCC--C----ceEEEeCHHHHHHHHHHHH-----hhcccc
Confidence 11000 000111111111111 122233334444333310000 0 00000111111 1111111 111122
Q ss_pred HhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 389 ALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 389 ~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
.++. .....|||++.|.++..++.+.-.++.+.+|++++++++++|||+|.|+|+++.+.|
T Consensus 246 ~l~~-~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp~~e~~~ld~aGHwVh~E~P~~~~~~i 306 (315)
T KOG2382|consen 246 DLED-GPYTGPVLFIKGLQSKFVPDEHYPRMEKIFPNVEVHELDEAGHWVHLEKPEEFIESI 306 (315)
T ss_pred cccc-cccccceeEEecCCCCCcChhHHHHHHHhccchheeecccCCceeecCCHHHHHHHH
Confidence 2222 456899999999999999999999999999999999999999999999999999876
|
|
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-22 Score=184.61 Aligned_cols=257 Identities=19% Similarity=0.233 Sum_probs=166.1
Q ss_pred CCccceeeecCCeEEEEeecCCCC--CCCCcEEEecCCCCCh-hcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCC
Q 013006 133 PITSCFWEWKPKFNVHYEKAGCEN--VNSPPVLFLPGFGVGS-FHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPR 208 (451)
Q Consensus 133 ~~~~~~~~~~~g~~l~y~~~g~~~--~~~p~VlllHG~~~~~-~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~ 208 (451)
..+..+++..+|.++++..|-|.+ +.+-.|+++||++... ..|..++..|+ .||.|+++|++|||.|+.....
T Consensus 26 ~~~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~y--- 102 (313)
T KOG1455|consen 26 TYSESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAY--- 102 (313)
T ss_pred ceeeeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCccc---
Confidence 456788888999999999998754 3345799999998875 77888888885 4899999999999999854332
Q ss_pred CCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhC------CCCEEEEEeCcchHHHHHHHHhCCCccc
Q 013006 209 SKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI------REPVYVVGNSLGGFVAVYFAACNPHLVK 282 (451)
Q Consensus 209 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~------~~~v~lvGhS~GG~val~~A~~~P~~v~ 282 (451)
.-+++..++|+..+.+... ..+..|+||||||+|++.++.++|+..+
T Consensus 103 ---------------------------i~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~ 155 (313)
T KOG1455|consen 103 ---------------------------VPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWD 155 (313)
T ss_pred ---------------------------CCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccc
Confidence 2588999999998888642 3579999999999999999999999999
Q ss_pred eEEEeccCCCCC--CCCCCCCchHHhh---hcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHH
Q 013006 283 GVTLLNATPFWG--FSPNPIRSPKLAR---ILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVF 357 (451)
Q Consensus 283 ~lvl~~~~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (451)
++|+++|..... ..|++.....+.. +.+.....+....... ...++... .....+...
T Consensus 156 G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~liP~wk~vp~~d~~~~-------~~kdp~~r-----~~~~~npl~----- 218 (313)
T KOG1455|consen 156 GAILVAPMCKISEDTKPHPPVISILTLLSKLIPTWKIVPTKDIIDV-------AFKDPEKR-----KILRSDPLC----- 218 (313)
T ss_pred cceeeecccccCCccCCCcHHHHHHHHHHHhCCceeecCCcccccc-------ccCCHHHH-----HHhhcCCce-----
Confidence 999999865311 1111111111111 1100000000000000 00001000 000000000
Q ss_pred HHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC--CCcEEEeCCCC
Q 013006 358 TRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP--EAPYYEISPAG 435 (451)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp--~~~~~~i~~~g 435 (451)
....+.. .....++. ...+...++.++++|.+++||+.|.++.+..++.+.+..+ +.++.++||.-
T Consensus 219 -----y~g~pRl-~T~~ElLr------~~~~le~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~ 286 (313)
T KOG1455|consen 219 -----YTGKPRL-KTAYELLR------VTADLEKNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMW 286 (313)
T ss_pred -----ecCCccH-HHHHHHHH------HHHHHHHhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHH
Confidence 0000000 01111110 1135566778999999999999999999999999999875 47899999999
Q ss_pred CCccccChHHHHh
Q 013006 436 HCPHDEVPEVCSL 448 (451)
Q Consensus 436 H~~~~e~p~~v~~ 448 (451)
|.++.-.|++..+
T Consensus 287 H~Ll~gE~~en~e 299 (313)
T KOG1455|consen 287 HSLLSGEPDENVE 299 (313)
T ss_pred HHhhcCCCchhHH
Confidence 9999744444433
|
|
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.2e-23 Score=203.34 Aligned_cols=251 Identities=15% Similarity=0.116 Sum_probs=144.3
Q ss_pred cceeeecCCeEEEEeecC----CCCCCCCcEEEecCCCCChhc-H-HHHHHh-hcCCceEEEEcCCCCCCCCCCCCCCCC
Q 013006 136 SCFWEWKPKFNVHYEKAG----CENVNSPPVLFLPGFGVGSFH-Y-EKQLKD-LGKDYRAWAIDFLGQGMSLPDEDPTPR 208 (451)
Q Consensus 136 ~~~~~~~~g~~l~y~~~g----~~~~~~p~VlllHG~~~~~~~-~-~~~~~~-L~~~~~Vi~~D~rG~G~S~~~~~~~~~ 208 (451)
...+...||..+.+.... ..+.++|+|||+||+++++.. | ..++.. +.++|+|+++|+||||.|......
T Consensus 73 re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~--- 149 (388)
T PLN02511 73 RECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQ--- 149 (388)
T ss_pred EEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcC---
Confidence 345666788777763321 112356899999999776543 5 445554 467899999999999999643211
Q ss_pred CCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCC----CCEEEEEeCcchHHHHHHHHhCCCc--cc
Q 013006 209 SKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR----EPVYVVGNSLGGFVAVYFAACNPHL--VK 282 (451)
Q Consensus 209 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~----~~v~lvGhS~GG~val~~A~~~P~~--v~ 282 (451)
+....+++|+.++++++.. .+++++||||||.+++.++.++|++ |.
T Consensus 150 ----------------------------~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~ 201 (388)
T PLN02511 150 ----------------------------FYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLS 201 (388)
T ss_pred ----------------------------EEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCce
Confidence 1223556677777777654 6899999999999999999999987 88
Q ss_pred eEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHH-HHHHHHHHHhcCChHHHHHHHHHHhhcCC--CChHHHHHH
Q 013006 283 GVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASV-RKLIEFIWQKISDPESIAEVLKQVYADHA--TNVDTVFTR 359 (451)
Q Consensus 283 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 359 (451)
++++++++.. . ......+... ..... ..+...+.. ........+.... ..... .
T Consensus 202 ~~v~is~p~~--l------~~~~~~~~~~-----~~~~y~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~-~-- 258 (388)
T PLN02511 202 GAVSLCNPFD--L------VIADEDFHKG-----FNNVYDKALAKALRK-------IFAKHALLFEGLGGEYNIPL-V-- 258 (388)
T ss_pred EEEEECCCcC--H------HHHHHHHhcc-----HHHHHHHHHHHHHHH-------HHHHHHHHHhhCCCccCHHH-H--
Confidence 8888875321 0 0000000000 00000 000000000 0000000000000 00000 0
Q ss_pred HHhhccChhHHHHHHHHHhcCCCCC-c------hhHHhhhccCCCCCEEEEeeCCCCCCChHHH-HHHHHHCCCCcEEEe
Q 013006 360 ILETTQHPAAAASFASIMFAPQGNL-S------FREALSRCQMNGVPICLIYGKEDPWVKPVWG-LQVKRQVPEAPYYEI 431 (451)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~-~~l~~~lp~~~~~~i 431 (451)
... .....+...+......+ . ..+....+.+|++|+|+|+|++|+++|++.. ..+.+..|++++.++
T Consensus 259 -~~~----~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~~~l~~~ 333 (388)
T PLN02511 259 -ANA----KTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANPNCLLIVT 333 (388)
T ss_pred -HhC----CCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCCCEEEEEC
Confidence 000 00000111010000000 0 0123446788999999999999999998765 456777899999999
Q ss_pred CCCCCCccccChHH
Q 013006 432 SPAGHCPHDEVPEV 445 (451)
Q Consensus 432 ~~~gH~~~~e~p~~ 445 (451)
+++||+.++|+|+.
T Consensus 334 ~~gGH~~~~E~p~~ 347 (388)
T PLN02511 334 PSGGHLGWVAGPEA 347 (388)
T ss_pred CCcceeccccCCCC
Confidence 99999999999875
|
|
| >KOG2984 consensus Predicted hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-23 Score=178.21 Aligned_cols=239 Identities=18% Similarity=0.115 Sum_probs=161.3
Q ss_pred cCCeEEEEeecCCCCCCCCcEEEecCCC-CChhcHHHHHHhhcC--CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhh
Q 013006 142 KPKFNVHYEKAGCENVNSPPVLFLPGFG-VGSFHYEKQLKDLGK--DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEK 218 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~~~~p~VlllHG~~-~~~~~~~~~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~ 218 (451)
-+|.+|+|...|.+ ...||+++|.. .....|.+++..|.+ .+.|+++|.||+|.|.++....+.
T Consensus 28 vng~ql~y~~~G~G---~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~---------- 94 (277)
T KOG2984|consen 28 VNGTQLGYCKYGHG---PNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEV---------- 94 (277)
T ss_pred ecCceeeeeecCCC---CceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchH----------
Confidence 46999999999953 34799999975 446779999988844 499999999999999887664321
Q ss_pred hccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCC
Q 013006 219 NFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPN 298 (451)
Q Consensus 219 ~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~ 298 (451)
.-+..-+++...+++.|..+++.++|+|-||.+|+..|+++++.|.++|++++.++..-...
T Consensus 95 ------------------~ff~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ 156 (277)
T KOG2984|consen 95 ------------------QFFMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGA 156 (277)
T ss_pred ------------------HHHHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhH
Confidence 12233455666788999999999999999999999999999999999999998754211000
Q ss_pred CCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHh
Q 013006 299 PIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMF 378 (451)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (451)
......+....|..+ .++-+...|.. +.+.+... .+......+..
T Consensus 157 -ma~kgiRdv~kWs~r-----------------------~R~P~e~~Yg~------e~f~~~wa-----~wvD~v~qf~~ 201 (277)
T KOG2984|consen 157 -MAFKGIRDVNKWSAR-----------------------GRQPYEDHYGP------ETFRTQWA-----AWVDVVDQFHS 201 (277)
T ss_pred -HHHhchHHHhhhhhh-----------------------hcchHHHhcCH------HHHHHHHH-----HHHHHHHHHhh
Confidence 000000000001000 00000111110 11111000 01111122222
Q ss_pred cCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 379 APQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 379 ~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
...+.+ -...+.+++||+||++|+.|++++..+...+..+.+.++++++|.++|.+|+..+++|+..+
T Consensus 202 ~~dG~f----Cr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a~~~~~peGkHn~hLrya~eFnklv 269 (277)
T KOG2984|consen 202 FCDGRF----CRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLAKVEIHPEGKHNFHLRYAKEFNKLV 269 (277)
T ss_pred cCCCch----HhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcccceEEEccCCCcceeeechHHHHHHH
Confidence 222222 12236789999999999999999999999999999999999999999999999999999875
|
|
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.1e-22 Score=194.80 Aligned_cols=295 Identities=14% Similarity=0.209 Sum_probs=177.1
Q ss_pred CCCCccceeeecCCeEEEEeecCCC-----CCCCCcEEEecCCCCChhcHH------HHHHhhcC-CceEEEEcCCCCCC
Q 013006 131 GAPITSCFWEWKPKFNVHYEKAGCE-----NVNSPPVLFLPGFGVGSFHYE------KQLKDLGK-DYRAWAIDFLGQGM 198 (451)
Q Consensus 131 ~~~~~~~~~~~~~g~~l~y~~~g~~-----~~~~p~VlllHG~~~~~~~~~------~~~~~L~~-~~~Vi~~D~rG~G~ 198 (451)
|.+.+...+++.||..|......+. ...+|+|||+||++.++..|. .+...|++ ||+||++|+||++.
T Consensus 41 gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~ 120 (395)
T PLN02872 41 GYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRW 120 (395)
T ss_pred CCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCccccccccccc
Confidence 7778888899999999888775321 123689999999999998884 34445654 89999999999988
Q ss_pred CCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHH-HHHHHHHHHh---CCCCEEEEEeCcchHHHHHHH
Q 013006 199 SLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQ-DQVCYFIKEV---IREPVYVVGNSLGGFVAVYFA 274 (451)
Q Consensus 199 S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a-~dv~~ll~~l---~~~~v~lvGhS~GG~val~~A 274 (451)
|.......+ .+..+|.| ++++++ .|+.++++.+ ..+++++|||||||.+++.++
T Consensus 121 s~gh~~~~~---------~~~~fw~~-------------s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~ 178 (395)
T PLN02872 121 SYGHVTLSE---------KDKEFWDW-------------SWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL 178 (395)
T ss_pred ccCCCCCCc---------cchhccCC-------------cHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh
Confidence 754322111 23345543 788888 7888888876 347999999999999998544
Q ss_pred HhCCC---ccceEEEeccCCCCCCCCCCCCch----HHhhh---cCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHH
Q 013006 275 ACNPH---LVKGVTLLNATPFWGFSPNPIRSP----KLARI---LPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQ 344 (451)
Q Consensus 275 ~~~P~---~v~~lvl~~~~~~~~~~~~~~~~~----~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (451)
.+|+ +|+++++++|.++..-...+.... ....+ +......+....+..+...++.. ...+...+..
T Consensus 179 -~~p~~~~~v~~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~---~~~c~~~~~~ 254 (395)
T PLN02872 179 -TQPNVVEMVEAAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEG---HMDCNDLLTS 254 (395)
T ss_pred -hChHHHHHHHHHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccC---chhHHHHHHH
Confidence 6786 689999999987654333322110 00011 11111112222333333333321 1113333333
Q ss_pred HhhcCCCChHHHHHHHHhhccChhHHHHHHHHHh----cCCCCCchh--HH----------hhhccCC--CCCEEEEeeC
Q 013006 345 VYADHATNVDTVFTRILETTQHPAAAASFASIMF----APQGNLSFR--EA----------LSRCQMN--GVPICLIYGK 406 (451)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~--~~----------~~~l~~i--~~PvLii~G~ 406 (451)
+...+.......+..++...........+..+.. .....+++. .. .-.+.++ ++|+++++|+
T Consensus 255 ~~g~~~~~n~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~ 334 (395)
T PLN02872 255 ITGTNCCFNASRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGG 334 (395)
T ss_pred HhCCCcccchhhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcC
Confidence 3332211111112222221111111111111111 111112211 11 1145667 5899999999
Q ss_pred CCCCCChHHHHHHHHHCCC-CcEEEeCCCCCC---ccccChHHHHhhhC
Q 013006 407 EDPWVKPVWGLQVKRQVPE-APYYEISPAGHC---PHDEVPEVCSLCLL 451 (451)
Q Consensus 407 ~D~~v~~~~~~~l~~~lp~-~~~~~i~~~gH~---~~~e~p~~v~~~Il 451 (451)
+|.+++++..+++.+.+++ .+++.++++||. ...+.|+++.+.|+
T Consensus 335 ~D~lv~~~dv~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il 383 (395)
T PLN02872 335 TDGLADVTDVEHTLAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMI 383 (395)
T ss_pred CCCCCCHHHHHHHHHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHH
Confidence 9999999999999999988 678889999995 45589999887763
|
|
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-22 Score=186.94 Aligned_cols=218 Identities=22% Similarity=0.294 Sum_probs=133.9
Q ss_pred ceEEEEcCCCCCCCCC---CCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEE
Q 013006 186 YRAWAIDFLGQGMSLP---DEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVG 262 (451)
Q Consensus 186 ~~Vi~~D~rG~G~S~~---~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvG 262 (451)
|+|+++|+||+|.|++ .... .++.+++++++..++++++.++++++|
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~l~~~~~~~vG 50 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFP------------------------------DYTTDDLAADLEALREALGIKKINLVG 50 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSC------------------------------THCHHHHHHHHHHHHHHHTTSSEEEEE
T ss_pred CEEEEEeCCCCCCCCCCccCCcc------------------------------cccHHHHHHHHHHHHHHhCCCCeEEEE
Confidence 7899999999999984 2111 289999999999999999999999999
Q ss_pred eCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCC--hHHHHH
Q 013006 263 NSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISD--PESIAE 340 (451)
Q Consensus 263 hS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 340 (451)
|||||++++.+|+++|++|+++|++++.+. .........+.. ................. ......
T Consensus 51 ~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~~---------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (230)
T PF00561_consen 51 HSMGGMLALEYAAQYPERVKKLVLISPPPD---------LPDGLWNRIWPR----GNLQGQLLDNFFNFLSDPIKPLLGR 117 (230)
T ss_dssp ETHHHHHHHHHHHHSGGGEEEEEEESESSH---------HHHHHHHHCHHH----HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECCChHHHHHHHHHCchhhcCcEEEeeecc---------chhhhhHHHHhh----hhhhhhHHHhhhccccccchhhhhh
Confidence 999999999999999999999999998520 000000000000 00000000000000000 000000
Q ss_pred HHHHHhhcCC---CChHHH--HHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHH
Q 013006 341 VLKQVYADHA---TNVDTV--FTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVW 415 (451)
Q Consensus 341 ~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~ 415 (451)
.......... ...... ...+... ........... .........+....+..+++|+++++|++|+++|++.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~ 193 (230)
T PF00561_consen 118 WPKQFFAYDREFVEDFLKQFQSQQYARF-AETDAFDNMFW---NALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPES 193 (230)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHHHT-CHHHHHHHHHH---HHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHH
T ss_pred hhhheeeccCccccchhhccchhhhhHH-HHHHHHhhhcc---ccccccccccccccccccCCCeEEEEeCCCCCCCHHH
Confidence 0000000000 000000 0011110 00000000000 0000112234455677899999999999999999999
Q ss_pred HHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 416 GLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 416 ~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
...+.+.+|+.++++++++||+.+++.|+++++.|
T Consensus 194 ~~~~~~~~~~~~~~~~~~~GH~~~~~~~~~~~~~i 228 (230)
T PF00561_consen 194 SEQLAKLIPNSQLVLIEGSGHFAFLEGPDEFNEII 228 (230)
T ss_dssp HHHHHHHSTTEEEEEETTCCSTHHHHSHHHHHHHH
T ss_pred HHHHHHhcCCCEEEECCCCChHHHhcCHHhhhhhh
Confidence 99999999999999999999999999999999887
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-21 Score=189.54 Aligned_cols=257 Identities=14% Similarity=0.115 Sum_probs=149.3
Q ss_pred eecCCeEEEEeecCCCCCCCCcEEEecCCCCChh-cH-------------------------HHHHHhh-cCCceEEEEc
Q 013006 140 EWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSF-HY-------------------------EKQLKDL-GKDYRAWAID 192 (451)
Q Consensus 140 ~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~-~~-------------------------~~~~~~L-~~~~~Vi~~D 192 (451)
+..||.+|++..+.+.++ +.+|+++||++.+.. .| ..+++.| .+||+|+++|
T Consensus 3 ~~~~g~~l~~~~~~~~~~-kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D 81 (332)
T TIGR01607 3 RNKDGLLLKTYSWIVKNA-IGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLD 81 (332)
T ss_pred cCCCCCeEEEeeeeccCC-eEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEec
Confidence 456899999999876543 459999999998885 11 4678888 4589999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhC------------------
Q 013006 193 FLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI------------------ 254 (451)
Q Consensus 193 ~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~------------------ 254 (451)
+||||.|........ ...+++++++|+..+++.+.
T Consensus 82 ~rGHG~S~~~~~~~g---------------------------~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~ 134 (332)
T TIGR01607 82 LQGHGESDGLQNLRG---------------------------HINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDI 134 (332)
T ss_pred ccccCCCcccccccc---------------------------chhhHHHHHHHHHHHHHHhhhhhccccccccccccccc
Confidence 999999974322110 01378999999999998642
Q ss_pred ------CCCEEEEEeCcchHHHHHHHHhCCC--------ccceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHH
Q 013006 255 ------REPVYVVGNSLGGFVAVYFAACNPH--------LVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPAS 320 (451)
Q Consensus 255 ------~~~v~lvGhS~GG~val~~A~~~P~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (451)
..|++|+||||||.+++.++.++++ .++++|++++.-.......+. ....+..
T Consensus 135 ~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~-------------~~~~~~~ 201 (332)
T TIGR01607 135 VNTKENRLPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDD-------------SFKFKYF 201 (332)
T ss_pred cccccCCCceeEeeccCccHHHHHHHHHhccccccccccccceEEEeccceEEecccCCC-------------cchhhhh
Confidence 3479999999999999999877643 589999888752100000000 0000000
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhh-c-cChh-HHHHHHHHHhcCCCCCchhHHhhhccCC-
Q 013006 321 VRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILET-T-QHPA-AAASFASIMFAPQGNLSFREALSRCQMN- 396 (451)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~i- 396 (451)
...+...+.. +........ ...+... +...+.+... . .... ....+..++... ......+..+
T Consensus 202 ~~~l~~~~~~-~~p~~~~~~--~~~~~~~----~~~~~~~~~Dp~~~~~~~s~~~~~~l~~~~------~~~~~~~~~i~ 268 (332)
T TIGR01607 202 YLPVMNFMSR-VFPTFRISK--KIRYEKS----PYVNDIIKFDKFRYDGGITFNLASELIKAT------DTLDCDIDYIP 268 (332)
T ss_pred HHHHHHHHHH-HCCcccccC--ccccccC----hhhhhHHhcCccccCCcccHHHHHHHHHHH------HHHHhhHhhCC
Confidence 0111110000 000000000 0000000 0000000000 0 0000 011111111000 0111123334
Q ss_pred -CCCEEEEeeCCCCCCChHHHHHHHHHC--CCCcEEEeCCCCCCccccC-hHHHHhhh
Q 013006 397 -GVPICLIYGKEDPWVKPVWGLQVKRQV--PEAPYYEISPAGHCPHDEV-PEVCSLCL 450 (451)
Q Consensus 397 -~~PvLii~G~~D~~v~~~~~~~l~~~l--p~~~~~~i~~~gH~~~~e~-p~~v~~~I 450 (451)
++|+|+|+|++|.+++++.++.+.+.. ++.++.++++++|.++.|. ++++.+.|
T Consensus 269 ~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i 326 (332)
T TIGR01607 269 KDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIEPGNEEVLKKI 326 (332)
T ss_pred CCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccCCCHHHHHHHH
Confidence 799999999999999999999887765 5688999999999999985 57776654
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2e-20 Score=181.60 Aligned_cols=253 Identities=13% Similarity=0.080 Sum_probs=139.7
Q ss_pred ceeeecCCeEEEEeec--CCCCCCCCcEEEecCCCCChhc--HHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCC
Q 013006 137 CFWEWKPKFNVHYEKA--GCENVNSPPVLFLPGFGVGSFH--YEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKE 211 (451)
Q Consensus 137 ~~~~~~~g~~l~y~~~--g~~~~~~p~VlllHG~~~~~~~--~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~ 211 (451)
..++..||..+.+... ....+++|+||++||++++... +..++..|. +||+|+++|+||||.+.... +....
T Consensus 34 ~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~-~~~~~-- 110 (324)
T PRK10985 34 QRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRL-HRIYH-- 110 (324)
T ss_pred eEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCC-cceEC--
Confidence 3456677766544322 2222346899999999877443 456777774 58999999999999774211 10000
Q ss_pred CCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCc--cceEEEecc
Q 013006 212 GDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHL--VKGVTLLNA 289 (451)
Q Consensus 212 ~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~--v~~lvl~~~ 289 (451)
....+|+.+.+..+.++++..+++++||||||.+++.+++++++. +.++|++++
T Consensus 111 ------------------------~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~ 166 (324)
T PRK10985 111 ------------------------SGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSA 166 (324)
T ss_pred ------------------------CCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcC
Confidence 013455555555555566778999999999999998888887654 899999987
Q ss_pred CCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHH-HHHHHhcCChHHHHHHHHHHhhcCCCChHHH-----HHHHHhh
Q 013006 290 TPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLI-EFIWQKISDPESIAEVLKQVYADHATNVDTV-----FTRILET 363 (451)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 363 (451)
.... ......+.. ....+. ..+...+. .........+......+.+.. ...+-+.
T Consensus 167 p~~~--------~~~~~~~~~---------~~~~~~~~~l~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~ 227 (324)
T PRK10985 167 PLML--------EACSYRMEQ---------GFSRVYQRYLLNLLK--ANAARKLAAYPGTLPINLAQLKSVRRLREFDDL 227 (324)
T ss_pred CCCH--------HHHHHHHhh---------hHHHHHHHHHHHHHH--HHHHHHHHhccccccCCHHHHhcCCcHHHHhhh
Confidence 4210 000000000 000000 00000000 000111111100000000000 0000000
Q ss_pred ccCh-hHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccC
Q 013006 364 TQHP-AAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEV 442 (451)
Q Consensus 364 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~ 442 (451)
...+ ........++. ..+....++++++|+++|+|++|++++++....+.+..+++++.+++++||+.++|-
T Consensus 228 ~~~~~~g~~~~~~~y~-------~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~GH~~~~~g 300 (324)
T PRK10985 228 ITARIHGFADAIDYYR-------QCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPPNVEYQLTEHGGHVGFVGG 300 (324)
T ss_pred heeccCCCCCHHHHHH-------HCChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCCCeEEEECCCCCceeeCCC
Confidence 0000 00001111111 012335567899999999999999999988888888888999999999999999874
|
|
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.5e-20 Score=181.79 Aligned_cols=232 Identities=18% Similarity=0.115 Sum_probs=144.5
Q ss_pred CccceeeecCCeEEEEeecCCC-CCCCCcEEEecCCCCCh-hcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCC
Q 013006 134 ITSCFWEWKPKFNVHYEKAGCE-NVNSPPVLFLPGFGVGS-FHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSK 210 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y~~~g~~-~~~~p~VlllHG~~~~~-~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~ 210 (451)
+....+...+|.+|......|. +.+.|+||+.||+.+.. ..|..++..|+ +||.|+++|+||+|.|......
T Consensus 168 ~e~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~----- 242 (414)
T PRK05077 168 LKELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLT----- 242 (414)
T ss_pred eEEEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCcc-----
Confidence 4444555667767776655442 23456676666766553 57888888885 4799999999999999642110
Q ss_pred CCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh---CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEe
Q 013006 211 EGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV---IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLL 287 (451)
Q Consensus 211 ~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l---~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~ 287 (451)
.+...+..++.+++... +.+++.++||||||.+++.+|..+|++|+++|++
T Consensus 243 --------------------------~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~ 296 (414)
T PRK05077 243 --------------------------QDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACL 296 (414)
T ss_pred --------------------------ccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEE
Confidence 23444445666666554 4578999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccCh
Q 013006 288 NATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHP 367 (451)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (451)
++.... .... ......+ +......+...+.......+. +...+..+
T Consensus 297 ~~~~~~-~~~~-------------------~~~~~~~----------p~~~~~~la~~lg~~~~~~~~-l~~~l~~~--- 342 (414)
T PRK05077 297 GPVVHT-LLTD-------------------PKRQQQV----------PEMYLDVLASRLGMHDASDEA-LRVELNRY--- 342 (414)
T ss_pred CCccch-hhcc-------------------hhhhhhc----------hHHHHHHHHHHhCCCCCChHH-HHHHhhhc---
Confidence 875310 0000 0000000 000011111111111111111 11000000
Q ss_pred hHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHH
Q 013006 368 AAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCS 447 (451)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~ 447 (451)
.......+ .+++++|+|+|+|++|+++|++.++.+.+..|+.+++++|++ ++.+.+++++
T Consensus 343 ---------------sl~~~~~l--~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~~l~~i~~~---~~~e~~~~~~ 402 (414)
T PRK05077 343 ---------------SLKVQGLL--GRRCPTPMLSGYWKNDPFSPEEDSRLIASSSADGKLLEIPFK---PVYRNFDKAL 402 (414)
T ss_pred ---------------cchhhhhh--ccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCCCeEEEccCC---CccCCHHHHH
Confidence 00000111 146899999999999999999999999999999999999985 5668899888
Q ss_pred hhh
Q 013006 448 LCL 450 (451)
Q Consensus 448 ~~I 450 (451)
..|
T Consensus 403 ~~i 405 (414)
T PRK05077 403 QEI 405 (414)
T ss_pred HHH
Confidence 765
|
|
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.5e-20 Score=159.76 Aligned_cols=213 Identities=17% Similarity=0.214 Sum_probs=145.7
Q ss_pred CcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccC
Q 013006 160 PPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYS 238 (451)
Q Consensus 160 p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s 238 (451)
..|||+|||.++....+.+.+.|.+ ||.|.+|.+||||-.... .+..+
T Consensus 16 ~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~-------------------------------fl~t~ 64 (243)
T COG1647 16 RAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPED-------------------------------FLKTT 64 (243)
T ss_pred EEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHH-------------------------------HhcCC
Confidence 6899999999999999999999965 799999999999987411 12368
Q ss_pred HHHHHHHHHHHHHHh---CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCC
Q 013006 239 VDLWQDQVCYFIKEV---IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTF 315 (451)
Q Consensus 239 ~~~~a~dv~~ll~~l---~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (451)
.++|.+++.+-.++| +.+.|.++|.||||.+++.+|..+| ++++|.++++... ..|
T Consensus 65 ~~DW~~~v~d~Y~~L~~~gy~eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~---------------k~~---- 123 (243)
T COG1647 65 PRDWWEDVEDGYRDLKEAGYDEIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNV---------------KSW---- 123 (243)
T ss_pred HHHHHHHHHHHHHHHHHcCCCeEEEEeecchhHHHHHHHhhCC--ccceeeecCCccc---------------ccc----
Confidence 999999988777766 5689999999999999999999998 9999999985310 000
Q ss_pred CChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhcc--ChhHHHHHHHHHhcCCCCCchhHHhhhc
Q 013006 316 PLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQ--HPAAAASFASIMFAPQGNLSFREALSRC 393 (451)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l 393 (451)
+..+..+..++ ++ +..-.....+.....+..+. .......+...+ .+....+
T Consensus 124 --~~iie~~l~y~--------------~~-~kk~e~k~~e~~~~e~~~~~~~~~~~~~~~~~~i---------~~~~~~~ 177 (243)
T COG1647 124 --RIIIEGLLEYF--------------RN-AKKYEGKDQEQIDKEMKSYKDTPMTTTAQLKKLI---------KDARRSL 177 (243)
T ss_pred --hhhhHHHHHHH--------------HH-hhhccCCCHHHHHHHHHHhhcchHHHHHHHHHHH---------HHHHhhh
Confidence 01111111111 00 00000011122222222221 111122222222 3455567
Q ss_pred cCCCCCEEEEeeCCCCCCChHHHHHHHHHCC--CCcEEEeCCCCCCcccc-ChHHHHhhh
Q 013006 394 QMNGVPICLIYGKEDPWVKPVWGLQVKRQVP--EAPYYEISPAGHCPHDE-VPEVCSLCL 450 (451)
Q Consensus 394 ~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp--~~~~~~i~~~gH~~~~e-~p~~v~~~I 450 (451)
..|..|++++.|.+|+++|.+.+..+..++- ..++.+++++||.+-.+ .-|++.+.+
T Consensus 178 ~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V 237 (243)
T COG1647 178 DKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDV 237 (243)
T ss_pred hhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHH
Confidence 7899999999999999999999999988874 36799999999987766 445555544
|
|
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.6e-20 Score=170.69 Aligned_cols=225 Identities=12% Similarity=0.122 Sum_probs=139.0
Q ss_pred cceeeecCCeEEEEeecCCC---CCCCCcEEEecCCCCChhcHHHHHHhhc-CCceEEEEcCCCC-CCCCCCCCCCCCCC
Q 013006 136 SCFWEWKPKFNVHYEKAGCE---NVNSPPVLFLPGFGVGSFHYEKQLKDLG-KDYRAWAIDFLGQ-GMSLPDEDPTPRSK 210 (451)
Q Consensus 136 ~~~~~~~~g~~l~y~~~g~~---~~~~p~VlllHG~~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~-G~S~~~~~~~~~~~ 210 (451)
...+...||.+|+-...-|+ .++.++||+.||++.....+..++..|+ +||.|+.+|+||+ |.|+..-..
T Consensus 11 ~~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~----- 85 (307)
T PRK13604 11 DHVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDE----- 85 (307)
T ss_pred hheEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcccc-----
Confidence 45667789999998888774 2345789999999998877999999995 4899999999988 898532111
Q ss_pred CCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh---CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEe
Q 013006 211 EGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV---IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLL 287 (451)
Q Consensus 211 ~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l---~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~ 287 (451)
.++.....|+.++++.+ +.+++.|+||||||.+++..|+.. .++++|+.
T Consensus 86 --------------------------~t~s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~ 137 (307)
T PRK13604 86 --------------------------FTMSIGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITA 137 (307)
T ss_pred --------------------------CcccccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEc
Confidence 12222345554444443 567899999999999997777643 49999999
Q ss_pred ccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhc-CCCChHHHHHHHHhhccC
Q 013006 288 NATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYAD-HATNVDTVFTRILETTQH 366 (451)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 366 (451)
+|... ++..++. .+...+.. ......... .....
T Consensus 138 sp~~~------------------------l~d~l~~-----------------~~~~~~~~~p~~~lp~~~----d~~g~ 172 (307)
T PRK13604 138 VGVVN------------------------LRDTLER-----------------ALGYDYLSLPIDELPEDL----DFEGH 172 (307)
T ss_pred CCccc------------------------HHHHHHH-----------------hhhcccccCccccccccc----ccccc
Confidence 98642 0000000 00000000 000000000 00000
Q ss_pred hhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC--CCcEEEeCCCCCCcc
Q 013006 367 PAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP--EAPYYEISPAGHCPH 439 (451)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp--~~~~~~i~~~gH~~~ 439 (451)
......+....+... ........+.++++++|+|+|||++|.+||++.++++.+.++ +++++++||++|.+.
T Consensus 173 ~l~~~~f~~~~~~~~-~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~ 246 (307)
T PRK13604 173 NLGSEVFVTDCFKHG-WDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLG 246 (307)
T ss_pred cccHHHHHHHHHhcC-ccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccC
Confidence 000000000000000 001122334455678999999999999999999999999885 688999999999865
|
|
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.1e-19 Score=178.86 Aligned_cols=252 Identities=14% Similarity=0.135 Sum_probs=153.1
Q ss_pred CCCcEEEecCCCCChhcHH-----HHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcc
Q 013006 158 NSPPVLFLPGFGVGSFHYE-----KQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPW 231 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~-----~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 231 (451)
.++|||++||+......|+ .++..|. +||+|+++|++|+|.+...... +
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~-------------------d------ 241 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTF-------------------D------ 241 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCCh-------------------h------
Confidence 5689999999988888885 6888885 5899999999999988532111 0
Q ss_pred ccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHH----HHHHhC-CCccceEEEeccCCCCCCCCCC---CC--
Q 013006 232 ASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAV----YFAACN-PHLVKGVTLLNATPFWGFSPNP---IR-- 301 (451)
Q Consensus 232 ~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val----~~A~~~-P~~v~~lvl~~~~~~~~~~~~~---~~-- 301 (451)
.|..+.+.+++..+++.++.++++++||||||.++. .+++.+ |++|++++++++...+...... ..
T Consensus 242 ----dY~~~~i~~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~ 317 (532)
T TIGR01838 242 ----DYIRDGVIAALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEE 317 (532)
T ss_pred ----hhHHHHHHHHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCch
Confidence 266777888898999889999999999999999852 345555 7899999999986532211000 00
Q ss_pred -chHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHH-HHHHHHHhhcCCCChHHHHHHHHhh-ccChhH-HHHHHHHH
Q 013006 302 -SPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESI-AEVLKQVYADHATNVDTVFTRILET-TQHPAA-AASFASIM 377 (451)
Q Consensus 302 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~ 377 (451)
...+.......+.++ .. .....+..+.....+ ..++.+.+... .........+... ..-+.. ...+...+
T Consensus 318 ~~~~~e~~~~~~G~lp--g~---~m~~~F~~lrp~~l~w~~~v~~yl~g~-~~~~fdll~Wn~D~t~lP~~~~~~~lr~l 391 (532)
T TIGR01838 318 IVAGIERQNGGGGYLD--GR---QMAVTFSLLRENDLIWNYYVDNYLKGK-SPVPFDLLFWNSDSTNLPGKMHNFYLRNL 391 (532)
T ss_pred hHHHHHHHHHhcCCCC--HH---HHHHHHHhcChhhHHHHHHHHHHhcCC-CccchhHHHHhccCccchHHHHHHHHHHH
Confidence 001111111111111 11 011111111122222 22222222111 1111111111111 111111 11111111
Q ss_pred hc----CCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChH
Q 013006 378 FA----PQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPE 444 (451)
Q Consensus 378 ~~----~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~ 444 (451)
+. ..+.+...+....+.+|++|+++|+|++|.++|++.++.+.+.+++.+..+++++||.+++++|.
T Consensus 392 y~~N~L~~G~~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 392 YLQNALTTGGLEVCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALLGGPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred HhcCCCcCCeeEECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCCCEEEEECCCCCchHhhCCC
Confidence 11 12333344455678899999999999999999999999999999999999999999999999985
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.1e-18 Score=165.21 Aligned_cols=240 Identities=13% Similarity=0.076 Sum_probs=136.9
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCCC----ChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhh
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFGV----GSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEE 217 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~~----~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~ 217 (451)
+|.++.-...-|.++++++||++||++. +...|..+++.|++ +|+|+++|+||||.|....
T Consensus 10 ~~~~l~g~~~~p~~~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~-------------- 75 (274)
T TIGR03100 10 EGETLVGVLHIPGASHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN-------------- 75 (274)
T ss_pred CCcEEEEEEEcCCCCCCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC--------------
Confidence 4555443333333334578888888653 33446677888864 7999999999999986321
Q ss_pred hhccccCCCCCCccccccccCHHHHHHHHHHHHHHh-----CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCC
Q 013006 218 KNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV-----IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPF 292 (451)
Q Consensus 218 ~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l-----~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~ 292 (451)
.+++++.+|+.++++.+ +.++++++||||||.+++.+|.. +++|+++|++++...
T Consensus 76 -------------------~~~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~ 135 (274)
T TIGR03100 76 -------------------LGFEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVR 135 (274)
T ss_pred -------------------CCHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccC
Confidence 35667777888777776 45789999999999999999765 468999999987411
Q ss_pred CCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHH
Q 013006 293 WGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAAS 372 (451)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (451)
.. .. ....... ..+....... ..+...+. ...........+..... .
T Consensus 136 --~~-~~----------------~~~~~~~---~~~~~~~~~~----~~~~~~~~-g~~~~~~~~~~~~~~~~------~ 182 (274)
T TIGR03100 136 --TE-AA----------------QAASRIR---HYYLGQLLSA----DFWRKLLS-GEVNLGSSLRGLGDALL------K 182 (274)
T ss_pred --Cc-cc----------------chHHHHH---HHHHHHHhCh----HHHHHhcC-CCccHHHHHHHHHHHHH------h
Confidence 00 00 0000010 1111111111 11111111 11111111111111000 0
Q ss_pred HHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHH------HHHHHHC--CCCcEEEeCCCCCCccccC-h
Q 013006 373 FASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWG------LQVKRQV--PEAPYYEISPAGHCPHDEV-P 443 (451)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~------~~l~~~l--p~~~~~~i~~~gH~~~~e~-p 443 (451)
...............+....+.++++|+|+++|++|...+ ... .++.+.+ +++++..+++++|++..+. +
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~l~~~~~P~ll~~g~~D~~~~-~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~ 261 (274)
T TIGR03100 183 ARQKGDEVAHGGLAERMKAGLERFQGPVLFILSGNDLTAQ-EFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVWR 261 (274)
T ss_pred hhhcCCCcccchHHHHHHHHHHhcCCcEEEEEcCcchhHH-HHHHHhccChhhHHHhhcCCeEEEecCCCCcccccHHHH
Confidence 0000000000001134445566789999999999998864 322 4455545 7899999999999995554 4
Q ss_pred HHHHhhh
Q 013006 444 EVCSLCL 450 (451)
Q Consensus 444 ~~v~~~I 450 (451)
+++.+.|
T Consensus 262 ~~v~~~i 268 (274)
T TIGR03100 262 EWVAART 268 (274)
T ss_pred HHHHHHH
Confidence 8887765
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.6e-19 Score=163.72 Aligned_cols=123 Identities=21% Similarity=0.329 Sum_probs=80.5
Q ss_pred EEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccC
Q 013006 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGF 224 (451)
Q Consensus 146 ~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~ 224 (451)
.++|...+..++..|+||++||++++...|..++..|++ ||+|+++|+||||.+....... ....+|
T Consensus 14 ~~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~----------~~~~~~-- 81 (249)
T PRK10566 14 VLHAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEAR----------RLNHFW-- 81 (249)
T ss_pred eEEEcCCCCCCCCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCcccc----------chhhHH--
Confidence 355555544334568999999999999899999999965 7999999999999863211100 000111
Q ss_pred CCCCCccccccccCHHHHHHHHHHHHHH--hCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEec
Q 013006 225 GDKAQPWASELAYSVDLWQDQVCYFIKE--VIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLN 288 (451)
Q Consensus 225 ~~~~~~~~~~~~~s~~~~a~dv~~ll~~--l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~ 288 (451)
.....+++++.+.+..+.+. ++.++++++|||+||.+++.++.++|+....+++++
T Consensus 82 --------~~~~~~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~ 139 (249)
T PRK10566 82 --------QILLQNMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMG 139 (249)
T ss_pred --------HHHHHHHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeC
Confidence 01112344444444343333 234789999999999999999999987444444544
|
|
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.3e-18 Score=161.23 Aligned_cols=259 Identities=25% Similarity=0.352 Sum_probs=150.4
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC---CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhh
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK---DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKN 219 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~---~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~ 219 (451)
.+..+.|...+.. +|+|+|+||++.+...|......+.. .|+|+++|+||||.|. .. .
T Consensus 8 ~~~~~~~~~~~~~---~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~-~-------------- 68 (282)
T COG0596 8 DGVRLAYREAGGG---GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA-G-------------- 68 (282)
T ss_pred CCeEEEEeecCCC---CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cc-c--------------
Confidence 4567777777753 56999999999999999884444322 2999999999999996 11 0
Q ss_pred ccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCC
Q 013006 220 FLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNP 299 (451)
Q Consensus 220 ~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~ 299 (451)
+....+++++..++++++..+++++||||||.+++.++.++|++++++|++++..........
T Consensus 69 -----------------~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~ 131 (282)
T COG0596 69 -----------------YSLSAYADDLAALLDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAA 131 (282)
T ss_pred -----------------ccHHHHHHHHHHHHHHhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCc
Confidence 355566999999999999999999999999999999999999999999999986431000000
Q ss_pred CCchHHhhhcCCCCCCCChHH-HHHHHHHHHHhcCChHHHHHHHHH----HhhcCCCChHHHHHHHHhhccChhHHHHHH
Q 013006 300 IRSPKLARILPWSGTFPLPAS-VRKLIEFIWQKISDPESIAEVLKQ----VYADHATNVDTVFTRILETTQHPAAAASFA 374 (451)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (451)
................. ... ........... . ........ ...................... ....
T Consensus 132 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 202 (282)
T COG0596 132 LRQPAGAAPLAALADLL-LGLDAAAFAALLAAL---G-LLAALAAAARAGLAEALRAPLLGAAAAAFARAAR----ADLA 202 (282)
T ss_pred cccCccccchhhhhhhh-hccchhhhhhhhhcc---c-ccccccccchhccccccccccchhHhhhhhhhcc----cccc
Confidence 00000000000000000 000 00000000000 0 00000000 0000000000000000000000 0000
Q ss_pred HHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC-CcEEEeCCCCCCccccChHHHHhhh
Q 013006 375 SIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE-APYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~-~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
..... ... .........+++|+++++|++|.+.+......+.+.+++ .++.+++++||++++++|+++++.+
T Consensus 203 ~~~~~---~~~-~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i 275 (282)
T COG0596 203 AALLA---LLD-RDLRAALARITVPTLIIHGEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAAL 275 (282)
T ss_pred hhhhc---ccc-cccchhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCCCceEEEeCCCCCcchhhcHHHHHHHH
Confidence 00000 000 022334567789999999999977777666777888885 8999999999999999999988765
|
|
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.6e-18 Score=166.85 Aligned_cols=116 Identities=15% Similarity=0.189 Sum_probs=86.4
Q ss_pred cCCeEEEEeecCCCCCCCCcEEEecCCCCChhcH-----HHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCch
Q 013006 142 KPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHY-----EKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDST 215 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~-----~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~ 215 (451)
.++.+++......+...++|||++||+..+...+ ..++..|.+ ||+|+++|++|+|.|...
T Consensus 45 ~~~~~l~~~~~~~~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~------------- 111 (350)
T TIGR01836 45 EDKVVLYRYTPVKDNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY------------- 111 (350)
T ss_pred cCcEEEEEecCCCCcCCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc-------------
Confidence 3456666654321223456899999986655554 578888854 799999999999987421
Q ss_pred hhhhccccCCCCCCccccccccCHHHHH-----HHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 216 EEKNFLWGFGDKAQPWASELAYSVDLWQ-----DQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 216 ~~~~~~w~~~~~~~~~~~~~~~s~~~~a-----~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
.++++++ +.+..+++..+.++++++||||||++++.+++.+|++|+++|++++.
T Consensus 112 ---------------------~~~~d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p 170 (350)
T TIGR01836 112 ---------------------LTLDDYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTP 170 (350)
T ss_pred ---------------------CCHHHHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccc
Confidence 3555554 33445556667899999999999999999999999999999999875
Q ss_pred C
Q 013006 291 P 291 (451)
Q Consensus 291 ~ 291 (451)
.
T Consensus 171 ~ 171 (350)
T TIGR01836 171 V 171 (350)
T ss_pred c
Confidence 4
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.4e-18 Score=153.68 Aligned_cols=180 Identities=17% Similarity=0.188 Sum_probs=130.8
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcC--CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGK--DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASEL 235 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 235 (451)
..++||+.||...+......+...|+. +.+|+.+|++|+|.|...+...
T Consensus 59 ~~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~----------------------------- 109 (258)
T KOG1552|consen 59 AHPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSER----------------------------- 109 (258)
T ss_pred cceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcccc-----------------------------
Confidence 458999999998888877777788866 7999999999999997543211
Q ss_pred ccCHHHHHHHHHHHHHHhC-CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCCC
Q 013006 236 AYSVDLWQDQVCYFIKEVI-REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGT 314 (451)
Q Consensus 236 ~~s~~~~a~dv~~ll~~l~-~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (451)
-..+|.-+....+.+..| .++++|+|+|+|+..++.+|++.| ++++||.+|...
T Consensus 110 -n~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S---------------------- 164 (258)
T KOG1552|consen 110 -NLYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTS---------------------- 164 (258)
T ss_pred -cchhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchh----------------------
Confidence 133333333333344443 588999999999999999999998 999999998420
Q ss_pred CCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhcc
Q 013006 315 FPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQ 394 (451)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 394 (451)
.++-++... ... ..++.....+.++
T Consensus 165 --------------------------~~rv~~~~~-~~~----------------------------~~~d~f~~i~kI~ 189 (258)
T KOG1552|consen 165 --------------------------GMRVAFPDT-KTT----------------------------YCFDAFPNIEKIS 189 (258)
T ss_pred --------------------------hhhhhccCc-ceE----------------------------EeeccccccCcce
Confidence 000000000 000 0111123356678
Q ss_pred CCCCCEEEEeeCCCCCCChHHHHHHHHHCCCC-cEEEeCCCCCCccccChHHH
Q 013006 395 MNGVPICLIYGKEDPWVKPVWGLQVKRQVPEA-PYYEISPAGHCPHDEVPEVC 446 (451)
Q Consensus 395 ~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~-~~~~i~~~gH~~~~e~p~~v 446 (451)
.++||+|++||++|.+++..++.++.+..++. +..++.|+||+-..-.|+-+
T Consensus 190 ~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~~~~~yi 242 (258)
T KOG1552|consen 190 KITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDIELYPEYI 242 (258)
T ss_pred eccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCcccccCHHHH
Confidence 89999999999999999999999999999885 88899999999776666543
|
|
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.2e-17 Score=184.43 Aligned_cols=250 Identities=18% Similarity=0.198 Sum_probs=139.1
Q ss_pred CCCcEEEecCCCCChhcHHHH-----HHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQ-----LKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPW 231 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~-----~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 231 (451)
.++||||+||++.+...|+.+ ++.| .++|+|+++|+ |.++.+....
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~------------------------- 117 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGM------------------------- 117 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCc-------------------------
Confidence 568999999999999999875 7888 45799999994 6655332110
Q ss_pred ccccccCHHHHHHHHHHHHHH---hCCCCEEEEEeCcchHHHHHHHHhC-CCccceEEEeccCCCCCCCCCCCCch-HH-
Q 013006 232 ASELAYSVDLWQDQVCYFIKE---VIREPVYVVGNSLGGFVAVYFAACN-PHLVKGVTLLNATPFWGFSPNPIRSP-KL- 305 (451)
Q Consensus 232 ~~~~~~s~~~~a~dv~~ll~~---l~~~~v~lvGhS~GG~val~~A~~~-P~~v~~lvl~~~~~~~~~~~~~~~~~-~~- 305 (451)
.+++.+++..+.+.++. +..++++++||||||++++.+|+.+ |++|+++|++++...+... .+...+ ..
T Consensus 118 ----~~~l~~~i~~l~~~l~~v~~~~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~-~~~~~~~~~~ 192 (994)
T PRK07868 118 ----ERNLADHVVALSEAIDTVKDVTGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAA-LPMGIPAGLA 192 (994)
T ss_pred ----cCCHHHHHHHHHHHHHHHHHhhCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCC-Ccccchhhhh
Confidence 14777777666666654 3457899999999999999998855 5689999998876432111 000000 00
Q ss_pred hhhcCC-----CCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhc---cChh-HHHHHHHH
Q 013006 306 ARILPW-----SGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETT---QHPA-AAASFASI 376 (451)
Q Consensus 306 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~ 376 (451)
.....+ .....+|.........+............++...........++....++... ..+. ....+...
T Consensus 193 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~ 272 (994)
T PRK07868 193 AAAADFMADHVFNRLDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQ 272 (994)
T ss_pred hcccccchhhhhhcCCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHH
Confidence 000000 01112222211111111000000011111122222111111111112222111 1111 11222222
Q ss_pred HhcC----CCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcE-EEeCCCCCCccc
Q 013006 377 MFAP----QGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPY-YEISPAGHCPHD 440 (451)
Q Consensus 377 ~~~~----~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~-~~i~~~gH~~~~ 440 (451)
+... .+.+........++++++|+|+|+|++|.++|++..+.+.+.+|++++ .+++++||+.++
T Consensus 273 ~~~~n~~~~g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~ 341 (994)
T PRK07868 273 FIAHNRMMTGGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLV 341 (994)
T ss_pred HHHhCcccCceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeee
Confidence 2111 111111122234788999999999999999999999999999999987 678999999654
|
|
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.5e-18 Score=153.28 Aligned_cols=86 Identities=20% Similarity=0.272 Sum_probs=72.5
Q ss_pred CcEEEecCCCCChhcHHH--HHHhhcC---CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccc
Q 013006 160 PPVLFLPGFGVGSFHYEK--QLKDLGK---DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASE 234 (451)
Q Consensus 160 p~VlllHG~~~~~~~~~~--~~~~L~~---~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 234 (451)
|+|||+||++++...|.. +...|++ +|+|+++|+||++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~------------------------------------- 44 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP------------------------------------- 44 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH-------------------------------------
Confidence 689999999999999984 3355543 7999999999873
Q ss_pred cccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 235 LAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 235 ~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
+++++++.+++++++.++++++||||||.+++.+|.++|. ++|+++|+
T Consensus 45 -----~~~~~~l~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~---~~vl~~~~ 92 (190)
T PRK11071 45 -----ADAAELLESLVLEHGGDPLGLVGSSLGGYYATWLSQCFML---PAVVVNPA 92 (190)
T ss_pred -----HHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHHcCC---CEEEECCC
Confidence 1457788899999999999999999999999999999983 46888875
|
|
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.77 E-value=8.3e-17 Score=151.01 Aligned_cols=287 Identities=15% Similarity=0.178 Sum_probs=174.8
Q ss_pred CCeEEEEeecCCCCCCC-CcEEEecCCCCChhc-----------HHHHHH---hh-cCCceEEEEcCCCCC-CCCCCCCC
Q 013006 143 PKFNVHYEKAGCENVNS-PPVLFLPGFGVGSFH-----------YEKQLK---DL-GKDYRAWAIDFLGQG-MSLPDEDP 205 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~-p~VlllHG~~~~~~~-----------~~~~~~---~L-~~~~~Vi~~D~rG~G-~S~~~~~~ 205 (451)
++..|.|+.+|..+..+ ..||++|++.+++.. |+.++. .+ ...|.||+.|..|.+ .|..|...
T Consensus 34 ~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~ 113 (368)
T COG2021 34 SDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSI 113 (368)
T ss_pred cCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCc
Confidence 46899999999876543 578889999886543 444442 23 236999999999977 55544433
Q ss_pred CCCCCCCCchhhhhccccCCCCCCcccccc-ccCHHHHHHHHHHHHHHhCCCCEE-EEEeCcchHHHHHHHHhCCCccce
Q 013006 206 TPRSKEGDSTEEKNFLWGFGDKAQPWASEL-AYSVDLWQDQVCYFIKEVIREPVY-VVGNSLGGFVAVYFAACNPHLVKG 283 (451)
Q Consensus 206 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~-~~s~~~~a~dv~~ll~~l~~~~v~-lvGhS~GG~val~~A~~~P~~v~~ 283 (451)
.+. .++|..++ .+|+.|+++.-+.++++||++++. +||-|||||.+++++..||++|++
T Consensus 114 ~p~-------------------g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~ 174 (368)
T COG2021 114 NPG-------------------GKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRR 174 (368)
T ss_pred CCC-------------------CCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhh
Confidence 221 12332222 489999999999999999999987 899999999999999999999999
Q ss_pred EEEeccCCCCCCCCCCCCch-----HHhhhcCCCCC-C---CChHHHHHHHHH-HHHhcCChHHHHHHHHHHhhcCCCC-
Q 013006 284 VTLLNATPFWGFSPNPIRSP-----KLARILPWSGT-F---PLPASVRKLIEF-IWQKISDPESIAEVLKQVYADHATN- 352 (451)
Q Consensus 284 lvl~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~- 352 (451)
++.+++++... +...... ....-..|.+. + ..|..--++.++ ..-....++.+.+.+.+........
T Consensus 175 ~i~ia~~~r~s--~~~ia~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~ 252 (368)
T COG2021 175 AIPIATAARLS--AQNIAFNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRG 252 (368)
T ss_pred hheecccccCC--HHHHHHHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCC
Confidence 99999864311 0000000 01111222211 0 112222222222 2222334444433332211111111
Q ss_pred --hHHHHHHHHhhcc-------ChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHC
Q 013006 353 --VDTVFTRILETTQ-------HPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQV 423 (451)
Q Consensus 353 --~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l 423 (451)
.....+.++.... ++...-.+...+..........+....++++++|+|++.-+.|.+.|++..+++.+.+
T Consensus 253 ~~~~f~vESYL~~qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L 332 (368)
T COG2021 253 GGVRFAVESYLDYQGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEAL 332 (368)
T ss_pred CchhHHHHHHHHHHHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhc
Confidence 1112222222211 1222222222222222223335666778899999999999999999999999999999
Q ss_pred CCCc-EEEeC-CCCCCccccChHHHHhhh
Q 013006 424 PEAP-YYEIS-PAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 424 p~~~-~~~i~-~~gH~~~~e~p~~v~~~I 450 (451)
+.+. +++|+ ..||.-++...+.+...|
T Consensus 333 ~~~~~~~~i~S~~GHDaFL~e~~~~~~~i 361 (368)
T COG2021 333 PAAGALREIDSPYGHDAFLVESEAVGPLI 361 (368)
T ss_pred cccCceEEecCCCCchhhhcchhhhhHHH
Confidence 9877 77765 469998888777765543
|
|
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.4e-17 Score=141.79 Aligned_cols=143 Identities=28% Similarity=0.404 Sum_probs=112.0
Q ss_pred cEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCH
Q 013006 161 PVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSV 239 (451)
Q Consensus 161 ~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~ 239 (451)
+|||+||++.+...|..++..|++ +|.|+.+|+||+|.+... ...
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~----------------------------------~~~ 46 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDGA----------------------------------DAV 46 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHHS----------------------------------HHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccchh----------------------------------HHH
Confidence 589999999999999999999854 799999999999998311 233
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChH
Q 013006 240 DLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPA 319 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (451)
+++.+++. .+..+.++++++|||+||.+++.++.++ .+++++|++++.+
T Consensus 47 ~~~~~~~~--~~~~~~~~i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~---------------------------- 95 (145)
T PF12695_consen 47 ERVLADIR--AGYPDPDRIILIGHSMGGAIAANLAARN-PRVKAVVLLSPYP---------------------------- 95 (145)
T ss_dssp HHHHHHHH--HHHCTCCEEEEEEETHHHHHHHHHHHHS-TTESEEEEESESS----------------------------
T ss_pred HHHHHHHH--hhcCCCCcEEEEEEccCcHHHHHHhhhc-cceeEEEEecCcc----------------------------
Confidence 33333333 1123668999999999999999999998 6899999999721
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCC
Q 013006 320 SVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVP 399 (451)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 399 (451)
+ ...+.+.++|
T Consensus 96 --------------------------------------------------------------------~-~~~~~~~~~p 106 (145)
T PF12695_consen 96 --------------------------------------------------------------------D-SEDLAKIRIP 106 (145)
T ss_dssp --------------------------------------------------------------------G-CHHHTTTTSE
T ss_pred --------------------------------------------------------------------c-hhhhhccCCc
Confidence 0 1112345779
Q ss_pred EEEEeeCCCCCCChHHHHHHHHHCC-CCcEEEeCCCCCC
Q 013006 400 ICLIYGKEDPWVKPVWGLQVKRQVP-EAPYYEISPAGHC 437 (451)
Q Consensus 400 vLii~G~~D~~v~~~~~~~l~~~lp-~~~~~~i~~~gH~ 437 (451)
+++++|++|..++++..+++.+.++ ..+++++++++|+
T Consensus 107 v~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 107 VLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp EEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred EEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 9999999999999999999988887 4789999999996
|
... |
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.72 E-value=6e-17 Score=144.74 Aligned_cols=114 Identities=23% Similarity=0.369 Sum_probs=94.3
Q ss_pred EEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC--CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhcccc
Q 013006 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK--DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWG 223 (451)
Q Consensus 146 ~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~ 223 (451)
++..+..++..+.+|.++++||.+.+.-.|..++..|.. ..+++++|+||||.+...+..
T Consensus 61 t~n~Y~t~~~~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~------------------ 122 (343)
T KOG2564|consen 61 TFNVYLTLPSATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENED------------------ 122 (343)
T ss_pred eEEEEEecCCCCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCChh------------------
Confidence 455555565556789999999999999999999999954 578899999999999654322
Q ss_pred CCCCCCccccccccCHHHHHHHHHHHHHHhC---CCCEEEEEeCcchHHHHHHHHh--CCCccceEEEeccC
Q 013006 224 FGDKAQPWASELAYSVDLWQDQVCYFIKEVI---REPVYVVGNSLGGFVAVYFAAC--NPHLVKGVTLLNAT 290 (451)
Q Consensus 224 ~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~---~~~v~lvGhS~GG~val~~A~~--~P~~v~~lvl~~~~ 290 (451)
..+.+.++.|+.++++.+= ..+++||||||||.||.+.|.. -|. +.++++++..
T Consensus 123 ------------dlS~eT~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVV 181 (343)
T KOG2564|consen 123 ------------DLSLETMSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVV 181 (343)
T ss_pred ------------hcCHHHHHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEe
Confidence 2799999999999999883 4679999999999999888775 465 9999999864
|
|
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.69 E-value=4.6e-16 Score=144.89 Aligned_cols=101 Identities=23% Similarity=0.288 Sum_probs=82.9
Q ss_pred CCcEEEecCCCCC----hhcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccc
Q 013006 159 SPPVLFLPGFGVG----SFHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWAS 233 (451)
Q Consensus 159 ~p~VlllHG~~~~----~~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 233 (451)
.++|||+||++.. ...|..+++.|+ .+|+|+++|+||||.|......
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~---------------------------- 76 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAA---------------------------- 76 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcccc----------------------------
Confidence 5789999999864 345777888886 5899999999999999643211
Q ss_pred ccccCHHHHHHHHHHHHH---HhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 234 ELAYSVDLWQDQVCYFIK---EVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 234 ~~~~s~~~~a~dv~~ll~---~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
.+++.+++|+..+++ +.+.++++|+||||||.+++.+|.++|++++++|+++|.
T Consensus 77 ---~~~~~~~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~ 133 (266)
T TIGR03101 77 ---ARWDVWKEDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPV 133 (266)
T ss_pred ---CCHHHHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccc
Confidence 467788888777554 446789999999999999999999999999999999985
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=99.68 E-value=5.8e-15 Score=133.69 Aligned_cols=239 Identities=15% Similarity=0.211 Sum_probs=153.4
Q ss_pred eEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhcccc
Q 013006 145 FNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWG 223 (451)
Q Consensus 145 ~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~ 223 (451)
++--|.+..+......+||=+||-+++...|..+.+.|.+ +.|+|.+++||+|.+...+..
T Consensus 21 ~~a~y~D~~~~gs~~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~------------------ 82 (297)
T PF06342_consen 21 VQAVYEDSLPSGSPLGTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQ------------------ 82 (297)
T ss_pred EEEEEEecCCCCCCceeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCccc------------------
Confidence 3445666654322334899999999999999999999954 899999999999999765443
Q ss_pred CCCCCCccccccccCHHHHHHHHHHHHHHhCC-CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCc
Q 013006 224 FGDKAQPWASELAYSVDLWQDQVCYFIKEVIR-EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRS 302 (451)
Q Consensus 224 ~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~-~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~ 302 (451)
.|+-.+-..-+.++++.+++ ++++++|||.|+-.|+.+|..+| +.++++++|.. +.+.-...
T Consensus 83 ------------~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G---~r~HkgIr 145 (297)
T PF06342_consen 83 ------------QYTNEERQNFVNALLDELGIKGKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPG---LRPHKGIR 145 (297)
T ss_pred ------------ccChHHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHhcCc--cceEEEecCCc---cccccCcC
Confidence 28999999999999999998 56889999999999999999996 67999999974 23222211
Q ss_pred hHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHH----HHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHh
Q 013006 303 PKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEV----LKQVYADHATNVDTVFTRILETTQHPAAAASFASIMF 378 (451)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (451)
+ ...-....+++..+ +..+... +.+++.-+-..-++.. .++.....
T Consensus 146 p---------------~~r~~~i~~l~~~l--p~~~~~~i~~~~y~~iG~KV~~GeeA~-------------na~r~m~~ 195 (297)
T PF06342_consen 146 P---------------LSRMETINYLYDLL--PRFIINAIMYFYYRMIGFKVSDGEEAI-------------NAMRSMQN 195 (297)
T ss_pred H---------------HHHHHHHHHHHHHh--hHHHHHHHHHHHHHHhCeeecChHHHH-------------HHHHHHHh
Confidence 1 01111111111111 1111111 1111221111111111 11111110
Q ss_pred cCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC---------------------------CcEEEe
Q 013006 379 APQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE---------------------------APYYEI 431 (451)
Q Consensus 379 ~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~---------------------------~~~~~i 431 (451)
.. .....+.++.+.+.++|+++++|.+|.++..+...+++..+.+ ..-+.+
T Consensus 196 ~d--f~~q~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f~~l~Hf~~~~~~seee~~kI~~~f~~~~~~~sv~f 273 (297)
T PF06342_consen 196 CD--FEEQKEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKFKGLDHFNIEKEISEEEKPKILKSFASGQKGASVFF 273 (297)
T ss_pred cC--HHHHHHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHhCCccceeeecCCChhHHHHHHHHHhcCCceeEEEE
Confidence 00 0111344556777789999999999999887766665444321 113456
Q ss_pred CCCCCCccccChHHHHhhh
Q 013006 432 SPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 432 ~~~gH~~~~e~p~~v~~~I 450 (451)
.+.||+.+-.+++-+++.+
T Consensus 274 ~~dgHf~qK~~A~lIA~~i 292 (297)
T PF06342_consen 274 AKDGHFQQKFRADLIAEAI 292 (297)
T ss_pred ecCChHHhHHHHHHHHHHH
Confidence 7789999999999888765
|
|
| >KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.67 E-value=8.9e-16 Score=132.16 Aligned_cols=198 Identities=17% Similarity=0.175 Sum_probs=136.6
Q ss_pred ceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhh--cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCc
Q 013006 137 CFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDL--GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDS 214 (451)
Q Consensus 137 ~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L--~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~ 214 (451)
....++|.++++-..--.++ ++|++|++|+..++..+.-+++.-+ .-+.+|+.+++||+|.|+..+..
T Consensus 57 i~l~T~D~vtL~a~~~~~E~-S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE--------- 126 (300)
T KOG4391|consen 57 IELRTRDKVTLDAYLMLSES-SRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSE--------- 126 (300)
T ss_pred EEEEcCcceeEeeeeecccC-CCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCccc---------
Confidence 34456789999877666554 7899999999999988887777665 33689999999999999854322
Q ss_pred hhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh------CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEec
Q 013006 215 TEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV------IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLN 288 (451)
Q Consensus 215 ~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l------~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~ 288 (451)
+.+.-|-+++++.+ ...++++.|.|+||++|+.+|+++.+++.++|+-+
T Consensus 127 -------------------------~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivEN 181 (300)
T KOG4391|consen 127 -------------------------EGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVEN 181 (300)
T ss_pred -------------------------cceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeec
Confidence 22333444555554 34679999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChh
Q 013006 289 ATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPA 368 (451)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (451)
+.... +. ...... ++. ..+.+..+...+ .
T Consensus 182 TF~SI---------p~--~~i~~v--~p~--------------------~~k~i~~lc~kn----------~-------- 210 (300)
T KOG4391|consen 182 TFLSI---------PH--MAIPLV--FPF--------------------PMKYIPLLCYKN----------K-------- 210 (300)
T ss_pred hhccc---------hh--hhhhee--ccc--------------------hhhHHHHHHHHh----------h--------
Confidence 74210 00 000000 000 000000000000 0
Q ss_pred HHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC--CcEEEeCCCCCCc
Q 013006 369 AAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE--APYYEISPAGHCP 438 (451)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~--~~~~~i~~~gH~~ 438 (451)
+ .....+++.+.|.|+|.|..|.+|||.+.+++.+.+|. .++.++|++.|.-
T Consensus 211 --------------~----~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHND 264 (300)
T KOG4391|consen 211 --------------W----LSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHND 264 (300)
T ss_pred --------------h----cchhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCc
Confidence 0 01112345689999999999999999999999999985 5789999999964
|
|
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.8e-15 Score=139.39 Aligned_cols=182 Identities=15% Similarity=0.152 Sum_probs=115.6
Q ss_pred CCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCc-cccc
Q 013006 157 VNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQP-WASE 234 (451)
Q Consensus 157 ~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~-~~~~ 234 (451)
+..++|||+||++++...|..+++.|.+ .+.+..++.+|...+.... ...++........ ....
T Consensus 14 ~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~--------------g~~W~~~~~~~~~~~~~~ 79 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGA--------------GRQWFSVQGITEDNRQAR 79 (232)
T ss_pred CCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCC--------------CcccccCCCCCccchHHH
Confidence 3568999999999999999999999965 3455666666654331110 0111111000000 0000
Q ss_pred cccCHHHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCC
Q 013006 235 LAYSVDLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWS 312 (451)
Q Consensus 235 ~~~s~~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (451)
.....+.+.+.+..+.+.+++ ++++++|||+||.+++.++.++|+.+.+++.+++...
T Consensus 80 ~~~~~~~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~-------------------- 139 (232)
T PRK11460 80 VAAIMPTFIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYA-------------------- 139 (232)
T ss_pred HHHHHHHHHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccc--------------------
Confidence 011122233333344444444 5799999999999999999999988888887764200
Q ss_pred CCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhh
Q 013006 313 GTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSR 392 (451)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (451)
.. + .
T Consensus 140 -~~-------------------~----------------------------------------------------~---- 143 (232)
T PRK11460 140 -SL-------------------P----------------------------------------------------E---- 143 (232)
T ss_pred -cc-------------------c----------------------------------------------------c----
Confidence 00 0 0
Q ss_pred ccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC----CCcEEEeCCCCCCccccChHHHHh
Q 013006 393 CQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP----EAPYYEISPAGHCPHDEVPEVCSL 448 (451)
Q Consensus 393 l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp----~~~~~~i~~~gH~~~~e~p~~v~~ 448 (451)
....+.|++++||++|+++|.+.++++.+.+. ++++++++++||.+..+.-+.+.+
T Consensus 144 ~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~ 203 (232)
T PRK11460 144 TAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDPRLMQFALD 203 (232)
T ss_pred cccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHH
Confidence 00136799999999999999999988877664 357888999999987555554443
|
|
| >KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.67 E-value=2e-15 Score=146.78 Aligned_cols=305 Identities=15% Similarity=0.143 Sum_probs=180.2
Q ss_pred CCCCCccceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHH------HHHhhcC-CceEEEEcCCCCCCCCCC
Q 013006 130 SGAPITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEK------QLKDLGK-DYRAWAIDFLGQGMSLPD 202 (451)
Q Consensus 130 ~~~~~~~~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~------~~~~L~~-~~~Vi~~D~rG~G~S~~~ 202 (451)
.|.+++....++.||.-+..........++|+|+|.||+..++..|-. +.-.|++ ||+||.-+.||...|...
T Consensus 44 ~gy~~E~h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h 123 (403)
T KOG2624|consen 44 YGYPVEEHEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKH 123 (403)
T ss_pred cCCceEEEEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhh
Confidence 367788888888998755544333222478999999999999999954 3344554 899999999999999766
Q ss_pred CCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCC---
Q 013006 203 EDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPH--- 279 (451)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~--- 279 (451)
....+ ....+||.| .|++...|++..+++.| ++..+.++++.||||.|+.+.+.++...|+
T Consensus 124 ~~l~~--------~~~~~FW~F-----S~~Em~~yDLPA~IdyI---L~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~ 187 (403)
T KOG2624|consen 124 KKLSP--------SSDKEFWDF-----SWHEMGTYDLPAMIDYI---LEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNK 187 (403)
T ss_pred cccCC--------cCCcceeec-----chhhhhhcCHHHHHHHH---HHhccccceEEEEEEccchhheehhcccchhhh
Confidence 54432 125679999 67776667776666555 677788999999999999999999998876
Q ss_pred ccceEEEeccCCCCCCCCCCCCch---------HHhhhcCCCCCCCChHHHHHHHHHHHHhc-CChHHHHHHHHHHhhcC
Q 013006 280 LVKGVTLLNATPFWGFSPNPIRSP---------KLARILPWSGTFPLPASVRKLIEFIWQKI-SDPESIAEVLKQVYADH 349 (451)
Q Consensus 280 ~v~~lvl~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 349 (451)
+|+.+++++|+.+......+.... ....++.....++.....+.+...++... .....+...+......+
T Consensus 188 kI~~~~aLAP~~~~k~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~ 267 (403)
T KOG2624|consen 188 KIKSFIALAPAAFPKHIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWN 267 (403)
T ss_pred hhheeeeecchhhhcccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcc
Confidence 799999999987543111110000 11222222223333333333444333311 11122222333232222
Q ss_pred CCChHHHHH-HHHhhccChhHHHHHHHHHhc----CCCCCch------------hHHhhhccCCCCCEEEEeeCCCCCCC
Q 013006 350 ATNVDTVFT-RILETTQHPAAAASFASIMFA----PQGNLSF------------REALSRCQMNGVPICLIYGKEDPWVK 412 (451)
Q Consensus 350 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~------------~~~~~~l~~i~~PvLii~G~~D~~v~ 412 (451)
......... .++..............+... ....+++ ......+.++++||.+.+|++|.++.
T Consensus 268 ~~~~n~~~~~~~~~h~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~ 347 (403)
T KOG2624|consen 268 SNNWNTTLLPVYLAHLPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLAD 347 (403)
T ss_pred hHhhhhcccchhhccCCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCC
Confidence 221111110 011111111111111111110 0001111 11222567789999999999999999
Q ss_pred hHHHHHHHHHCCCCcEEE---eCCCCCCcc---ccChHHHHhhh
Q 013006 413 PVWGLQVKRQVPEAPYYE---ISPAGHCPH---DEVPEVCSLCL 450 (451)
Q Consensus 413 ~~~~~~l~~~lp~~~~~~---i~~~gH~~~---~e~p~~v~~~I 450 (451)
++....+....+++.... +++-.|.-+ .+.++++.+.|
T Consensus 348 ~~DV~~~~~~~~~~~~~~~~~~~~ynHlDFi~g~da~~~vy~~v 391 (403)
T KOG2624|consen 348 PEDVLILLLVLPNSVIKYIVPIPEYNHLDFIWGLDAKEEVYDPV 391 (403)
T ss_pred HHHHHHHHHhcccccccccccCCCccceeeeeccCcHHHHHHHH
Confidence 999998888888765432 677777533 34577776654
|
|
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.65 E-value=8.4e-15 Score=138.75 Aligned_cols=130 Identities=19% Similarity=0.281 Sum_probs=88.4
Q ss_pred cCCeEEEEeecCCC---CCCCCcEEEecCCCCChhcHHH--HHHhhcC--CceEEEEcC--CCCCCCCCCCCCCCCCCCC
Q 013006 142 KPKFNVHYEKAGCE---NVNSPPVLFLPGFGVGSFHYEK--QLKDLGK--DYRAWAIDF--LGQGMSLPDEDPTPRSKEG 212 (451)
Q Consensus 142 ~~g~~l~y~~~g~~---~~~~p~VlllHG~~~~~~~~~~--~~~~L~~--~~~Vi~~D~--rG~G~S~~~~~~~~~~~~~ 212 (451)
.-+..+.|..+.|+ ..+.|+|+|+||++.+...|.. .+..|+. ++.|+++|. +|+|.+...
T Consensus 22 ~~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~---------- 91 (275)
T TIGR02821 22 TCGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGED---------- 91 (275)
T ss_pred ccCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCc----------
Confidence 34666667666653 2346899999999999888854 3345533 799999998 555544211
Q ss_pred CchhhhhccccCCCC--------CCccccccccCHH-HHHHHHHHHHHH---hCCCCEEEEEeCcchHHHHHHHHhCCCc
Q 013006 213 DSTEEKNFLWGFGDK--------AQPWASELAYSVD-LWQDQVCYFIKE---VIREPVYVVGNSLGGFVAVYFAACNPHL 280 (451)
Q Consensus 213 ~~~~~~~~~w~~~~~--------~~~~~~~~~~s~~-~~a~dv~~ll~~---l~~~~v~lvGhS~GG~val~~A~~~P~~ 280 (451)
..|.++.. ..++. ..++.. .+++++..++++ ++.++++++||||||++++.++.++|+.
T Consensus 92 -------~~w~~g~~~~~~~d~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~ 162 (275)
T TIGR02821 92 -------DAWDFGKGAGFYVDATEEPWS--QHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDR 162 (275)
T ss_pred -------ccccccCCccccccCCcCccc--ccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCccc
Confidence 11221110 00111 113433 446788888887 3557899999999999999999999999
Q ss_pred cceEEEeccC
Q 013006 281 VKGVTLLNAT 290 (451)
Q Consensus 281 v~~lvl~~~~ 290 (451)
+++++++++.
T Consensus 163 ~~~~~~~~~~ 172 (275)
T TIGR02821 163 FKSVSAFAPI 172 (275)
T ss_pred ceEEEEECCc
Confidence 9999999875
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=99.63 E-value=4.1e-14 Score=129.95 Aligned_cols=251 Identities=17% Similarity=0.214 Sum_probs=138.4
Q ss_pred eEEEEeecCCCCCCCCcEEEecCCCCChhc-HHHHH-----HhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhh
Q 013006 145 FNVHYEKAGCENVNSPPVLFLPGFGVGSFH-YEKQL-----KDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEK 218 (451)
Q Consensus 145 ~~l~y~~~g~~~~~~p~VlllHG~~~~~~~-~~~~~-----~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~ 218 (451)
-.|++...|..+.++|+||-.|-+|.+... |..++ ..+.+++.|+=+|.||+..-... -+..+
T Consensus 9 G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~-~p~~y---------- 77 (283)
T PF03096_consen 9 GSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAAT-LPEGY---------- 77 (283)
T ss_dssp EEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT------TT-----------
T ss_pred eEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCccc-ccccc----------
Confidence 378888888766568999999999988766 66654 45677899999999999764321 11110
Q ss_pred hccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCC
Q 013006 219 NFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPN 298 (451)
Q Consensus 219 ~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~ 298 (451)
..-|++++++++..++++++++.++.+|--.|+.|..++|..||++|.++||+++.+..
T Consensus 78 ----------------~yPsmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~----- 136 (283)
T PF03096_consen 78 ----------------QYPSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTA----- 136 (283)
T ss_dssp --------------------HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S------
T ss_pred ----------------cccCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCC-----
Confidence 02599999999999999999999999999999999999999999999999999986420
Q ss_pred CCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHH-HHHHhhc----CCCChHHHHHHHHhhccChhHHHHH
Q 013006 299 PIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEV-LKQVYAD----HATNVDTVFTRILETTQHPAAAASF 373 (451)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (451)
..+... ...++..+.+..........++ +...+.. ...+.-+.+.+.+.....+.....|
T Consensus 137 ---~gw~Ew------------~~~K~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f 201 (283)
T PF03096_consen 137 ---AGWMEW------------FYQKLSSWLLYSYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALF 201 (283)
T ss_dssp -----HHHH------------HHHHHH-------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHH
T ss_pred ---ccHHHH------------HHHHHhcccccccccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHH
Confidence 000000 0111111111111111112121 1222211 1111223333333333333333333
Q ss_pred HHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC--CCcEEEeCCCCCCccccChHHHHhhh
Q 013006 374 ASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP--EAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp--~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
...+.. ..+.........||+|++.|++.+.+. .+.++..++. ...+..++++|=.++.|+|+.+++.+
T Consensus 202 ~~sy~~------R~DL~~~~~~~~c~vLlvvG~~Sp~~~--~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~ 272 (283)
T PF03096_consen 202 LNSYNS------RTDLSIERPSLGCPVLLVVGDNSPHVD--DVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAF 272 (283)
T ss_dssp HHHHHT-----------SECTTCCS-EEEEEETTSTTHH--HHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHH
T ss_pred HHHHhc------cccchhhcCCCCCCeEEEEecCCcchh--hHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHH
Confidence 222211 134444456677999999999987664 4456666663 35788999999999999999999875
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.1e-13 Score=125.08 Aligned_cols=253 Identities=16% Similarity=0.235 Sum_probs=160.3
Q ss_pred eEEEEeecCCCCCCCCcEEEecCCCCChhc-HHHHH-----HhhcCCceEEEEcCCCCCCCCCC-CCCCCCCCCCCchhh
Q 013006 145 FNVHYEKAGCENVNSPPVLFLPGFGVGSFH-YEKQL-----KDLGKDYRAWAIDFLGQGMSLPD-EDPTPRSKEGDSTEE 217 (451)
Q Consensus 145 ~~l~y~~~g~~~~~~p~VlllHG~~~~~~~-~~~~~-----~~L~~~~~Vi~~D~rG~G~S~~~-~~~~~~~~~~~~~~~ 217 (451)
-.+++...|.++.++|.+|-.|.++.+... |..++ ..+..++.|+-+|.|||-.-.+. +...+
T Consensus 32 G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~fcv~HV~~PGqe~gAp~~p~~y~---------- 101 (326)
T KOG2931|consen 32 GVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEHFCVYHVDAPGQEDGAPSFPEGYP---------- 101 (326)
T ss_pred ccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhheEEEecCCCccccCCccCCCCCC----------
Confidence 467788888776668888889999988766 65554 44556799999999998654221 11111
Q ss_pred hhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCC
Q 013006 218 KNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSP 297 (451)
Q Consensus 218 ~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~ 297 (451)
.-|++++++++..++++++.+.++-+|.-.|+.|..++|..||++|.++||+++.+.-
T Consensus 102 ------------------yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a---- 159 (326)
T KOG2931|consen 102 ------------------YPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCA---- 159 (326)
T ss_pred ------------------CCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCC----
Confidence 1599999999999999999999999999999999999999999999999999986420
Q ss_pred CCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHH-HHHHhhcCCCC----hHHHHHHHHhhccChhHHHH
Q 013006 298 NPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEV-LKQVYADHATN----VDTVFTRILETTQHPAAAAS 372 (451)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 372 (451)
. .+.. ....++...++.....-..+.++ +...|...... .-+.+.+.+.....+.....
T Consensus 160 ----~----gwie--------w~~~K~~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~ 223 (326)
T KOG2931|consen 160 ----K----GWIE--------WAYNKVSSNLLYYYGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLAL 223 (326)
T ss_pred ----c----hHHH--------HHHHHHHHHHHHhhchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHH
Confidence 0 0011 11122222222222222222222 22333322221 12334444444444333333
Q ss_pred HHHHHhcCCCCCchhHHhhhcc-CCCCCEEEEeeCCCCCCChHHHHHHHHHCC--CCcEEEeCCCCCCccccChHHHHhh
Q 013006 373 FASIMFAPQGNLSFREALSRCQ-MNGVPICLIYGKEDPWVKPVWGLQVKRQVP--EAPYYEISPAGHCPHDEVPEVCSLC 449 (451)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~l~-~i~~PvLii~G~~D~~v~~~~~~~l~~~lp--~~~~~~i~~~gH~~~~e~p~~v~~~ 449 (451)
|...+ ....+.......+. .++||+|++.|++.+.+. ...++...+. +..+..+.++|-.++.++|..+++.
T Consensus 224 fl~ay---n~R~DL~~~r~~~~~tlkc~vllvvGd~Sp~~~--~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea 298 (326)
T KOG2931|consen 224 FLNAY---NGRRDLSIERPKLGTTLKCPVLLVVGDNSPHVS--AVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEA 298 (326)
T ss_pred HHHHh---cCCCCccccCCCcCccccccEEEEecCCCchhh--hhhhhhcccCcccceEEEEcccCCcccccCchHHHHH
Confidence 33222 22222211111111 567999999999987764 3444555443 4678889999999999999999876
Q ss_pred h
Q 013006 450 L 450 (451)
Q Consensus 450 I 450 (451)
+
T Consensus 299 ~ 299 (326)
T KOG2931|consen 299 F 299 (326)
T ss_pred H
Confidence 5
|
|
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.8e-14 Score=134.63 Aligned_cols=133 Identities=16% Similarity=0.237 Sum_probs=87.0
Q ss_pred CCeEEEEeecCCC---CCCCCcEEEecCCCCChhcHHHH---HHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCch
Q 013006 143 PKFNVHYEKAGCE---NVNSPPVLFLPGFGVGSFHYEKQ---LKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDST 215 (451)
Q Consensus 143 ~g~~l~y~~~g~~---~~~~p~VlllHG~~~~~~~~~~~---~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~ 215 (451)
-|..+.|..+-|+ +...|+|+|+||++++...|... ...++ .++.|+.+|..++|.-...
T Consensus 28 l~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~------------- 94 (283)
T PLN02442 28 LGCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEG------------- 94 (283)
T ss_pred cCCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCC-------------
Confidence 3556666555332 23468999999999888777443 23444 3799999999887732111
Q ss_pred hhhhccccCCCC--------CCccc--cccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEE
Q 013006 216 EEKNFLWGFGDK--------AQPWA--SELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVT 285 (451)
Q Consensus 216 ~~~~~~w~~~~~--------~~~~~--~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lv 285 (451)
....|.++.. ...|. +...+-.+++.+.+..+.+.++.++++|+||||||..++.++.++|+++++++
T Consensus 95 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~ 172 (283)
T PLN02442 95 --EADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVS 172 (283)
T ss_pred --CccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEE
Confidence 1111211100 00000 01123455666666666666778899999999999999999999999999999
Q ss_pred EeccC
Q 013006 286 LLNAT 290 (451)
Q Consensus 286 l~~~~ 290 (451)
.+++.
T Consensus 173 ~~~~~ 177 (283)
T PLN02442 173 AFAPI 177 (283)
T ss_pred EECCc
Confidence 99975
|
|
| >KOG4667 consensus Predicted esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.3e-14 Score=123.56 Aligned_cols=204 Identities=20% Similarity=0.191 Sum_probs=125.9
Q ss_pred CCCcEEEecCCCCChh--cHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccc
Q 013006 158 NSPPVLFLPGFGVGSF--HYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASE 234 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~--~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 234 (451)
+...+|++||+-.+.. ....++..|.+ ++.++.+|++|.|.|+..-.+ |
T Consensus 32 s~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~-----------------G----------- 83 (269)
T KOG4667|consen 32 STEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYY-----------------G----------- 83 (269)
T ss_pred CceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCcccc-----------------C-----------
Confidence 4568999999976643 34556677765 799999999999999643221 1
Q ss_pred cccCHHHHHHHHHHHHHHhCCC-C--EEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCC
Q 013006 235 LAYSVDLWQDQVCYFIKEVIRE-P--VYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPW 311 (451)
Q Consensus 235 ~~~s~~~~a~dv~~ll~~l~~~-~--v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (451)
.....++|+..+++++... + -+++|||-||-+++.+|.++++ ++-+|-++.--.
T Consensus 84 ---n~~~eadDL~sV~q~~s~~nr~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRyd------------------- 140 (269)
T KOG4667|consen 84 ---NYNTEADDLHSVIQYFSNSNRVVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYD------------------- 140 (269)
T ss_pred ---cccchHHHHHHHHHHhccCceEEEEEEeecCccHHHHHHHHhhcC-chheEEcccccc-------------------
Confidence 2233459999999998543 2 3589999999999999999987 777777775311
Q ss_pred CCCCCChHHH-HHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHh
Q 013006 312 SGTFPLPASV-RKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREAL 390 (451)
Q Consensus 312 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (451)
+...+ .++.+ ..+.....+-+-+........-.+ ..-...+... . .+.-
T Consensus 141 -----l~~~I~eRlg~---------~~l~~ike~Gfid~~~rkG~y~~r-----------vt~eSlmdrL--n---td~h 190 (269)
T KOG4667|consen 141 -----LKNGINERLGE---------DYLERIKEQGFIDVGPRKGKYGYR-----------VTEESLMDRL--N---TDIH 190 (269)
T ss_pred -----hhcchhhhhcc---------cHHHHHHhCCceecCcccCCcCce-----------ecHHHHHHHH--h---chhh
Confidence 11111 01111 111111111111111100000000 0000000000 0 1112
Q ss_pred hhccC--CCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccC
Q 013006 391 SRCQM--NGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEV 442 (451)
Q Consensus 391 ~~l~~--i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~ 442 (451)
+.+.+ .+||||-+||..|.+||.+.+.++++.+|+-++.++||+.|..-..+
T Consensus 191 ~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~nH~L~iIEgADHnyt~~q 244 (269)
T KOG4667|consen 191 EACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPNHKLEIIEGADHNYTGHQ 244 (269)
T ss_pred hhhcCcCccCceEEEeccCCceeechhHHHHHHhccCCceEEecCCCcCccchh
Confidence 22222 48999999999999999999999999999999999999999865443
|
|
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.58 E-value=4.6e-14 Score=130.49 Aligned_cols=52 Identities=19% Similarity=0.209 Sum_probs=44.8
Q ss_pred hhhccCCCCCEEEEeeCCCCCCChHHHHHHHH-HCCCCcEEEeCCCCCCcccc
Q 013006 390 LSRCQMNGVPICLIYGKEDPWVKPVWGLQVKR-QVPEAPYYEISPAGHCPHDE 441 (451)
Q Consensus 390 ~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~-~lp~~~~~~i~~~gH~~~~e 441 (451)
...+.+|.+|+|||+..+|++++++..-.... ..|++.+.+.+.+||.-++.
T Consensus 267 ~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~ 319 (345)
T COG0429 267 LPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLG 319 (345)
T ss_pred cccccccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEecc
Confidence 44678999999999999999999987766665 67888999999999998877
|
|
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.58 E-value=6.5e-14 Score=124.58 Aligned_cols=219 Identities=12% Similarity=0.097 Sum_probs=141.0
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAY 237 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 237 (451)
.++.++++|-.|+++..|+.+...|.....++++.+||+|..-..+. ..
T Consensus 6 ~~~~L~cfP~AGGsa~~fr~W~~~lp~~iel~avqlPGR~~r~~ep~-------------------------------~~ 54 (244)
T COG3208 6 ARLRLFCFPHAGGSASLFRSWSRRLPADIELLAVQLPGRGDRFGEPL-------------------------------LT 54 (244)
T ss_pred CCceEEEecCCCCCHHHHHHHHhhCCchhheeeecCCCcccccCCcc-------------------------------cc
Confidence 45789999999999999999999998889999999999997643221 26
Q ss_pred CHHHHHHHHHHHHH-HhCCCCEEEEEeCcchHHHHHHHHhCC---CccceEEEeccCCCCCCCCCCCCchHHhhhcCCCC
Q 013006 238 SVDLWQDQVCYFIK-EVIREPVYVVGNSLGGFVAVYFAACNP---HLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSG 313 (451)
Q Consensus 238 s~~~~a~dv~~ll~-~l~~~~v~lvGhS~GG~val~~A~~~P---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (451)
+++.+++.+..-+. -+.-+++.++||||||++|.++|.+.. ..+.++.+.+..++ .... .
T Consensus 55 di~~Lad~la~el~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP-~~~~----~----------- 118 (244)
T COG3208 55 DIESLADELANELLPPLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAP-HYDR----G----------- 118 (244)
T ss_pred cHHHHHHHHHHHhccccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCC-CCcc----c-----------
Confidence 89999999988877 355578999999999999999998742 23677777776542 0000 0
Q ss_pred CCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhc
Q 013006 314 TFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRC 393 (451)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 393 (451)
.......-..+.+.+...-..+..+. ..++.++-++... +.+ ......+ .+.. -
T Consensus 119 ~~i~~~~D~~~l~~l~~lgG~p~e~l------------ed~El~~l~LPil-RAD-~~~~e~Y--------~~~~----~ 172 (244)
T COG3208 119 KQIHHLDDADFLADLVDLGGTPPELL------------EDPELMALFLPIL-RAD-FRALESY--------RYPP----P 172 (244)
T ss_pred CCccCCCHHHHHHHHHHhCCCChHHh------------cCHHHHHHHHHHH-HHH-HHHhccc--------ccCC----C
Confidence 00000111111111111111111110 0011111111111 000 0000111 1111 1
Q ss_pred cCCCCCEEEEeeCCCCCCChHHHHHHHHHCC-CCcEEEeCCCCCCccccChHHHHhhh
Q 013006 394 QMNGVPICLIYGKEDPWVKPVWGLQVKRQVP-EAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 394 ~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp-~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
..++||+.++.|++|..+..+....+.++.. ..++.+++ +||+...++.+++...|
T Consensus 173 ~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fd-GgHFfl~~~~~~v~~~i 229 (244)
T COG3208 173 APLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFD-GGHFFLNQQREEVLARL 229 (244)
T ss_pred CCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEec-CcceehhhhHHHHHHHH
Confidence 3579999999999999999999998988887 57899996 59999999999888765
|
|
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=99.55 E-value=5.3e-13 Score=133.85 Aligned_cols=257 Identities=11% Similarity=0.071 Sum_probs=144.0
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCCCChhcH-----HHHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchh
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHY-----EKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTE 216 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~-----~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~ 216 (451)
+..+|..+..-.+...++|||+++.+-.....| +.+++.| .+|++|+++|+++-+...+.
T Consensus 199 ~l~eLiqY~P~te~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r~-------------- 264 (560)
T TIGR01839 199 EVLELIQYKPITEQQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHRE-------------- 264 (560)
T ss_pred CceEEEEeCCCCCCcCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhcC--------------
Confidence 344554443222234568999999998777777 4678887 66899999999986655321
Q ss_pred hhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh----CCCCEEEEEeCcchHHHHH----HHHhCCC-ccceEEEe
Q 013006 217 EKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV----IREPVYVVGNSLGGFVAVY----FAACNPH-LVKGVTLL 287 (451)
Q Consensus 217 ~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l----~~~~v~lvGhS~GG~val~----~A~~~P~-~v~~lvl~ 287 (451)
.+++++++.+.+.++.+ +.++++++|+||||.+++. +++++++ +|++++++
T Consensus 265 --------------------~~ldDYv~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltll 324 (560)
T TIGR01839 265 --------------------WGLSTYVDALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYL 324 (560)
T ss_pred --------------------CCHHHHHHHHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEee
Confidence 57777777666666555 6789999999999999987 8888886 89999999
Q ss_pred ccCCCCCCCCCC---CCchHH---hhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhh-cCCCChHHHHHHH
Q 013006 288 NATPFWGFSPNP---IRSPKL---ARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYA-DHATNVDTVFTRI 360 (451)
Q Consensus 288 ~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 360 (451)
.+...+...... ...... .......+..+- ..+ ...+..+.....+..++...+. .+...... +..+
T Consensus 325 atplDf~~~g~l~~f~~e~~~~~~e~~~~~~G~lpg-~~m----a~~F~~LrP~dliw~y~v~~yllg~~p~~fd-ll~W 398 (560)
T TIGR01839 325 VSLLDSTMESPAALFADEQTLEAAKRRSYQAGVLDG-SEM----AKVFAWMRPNDLIWNYWVNNYLLGNEPPAFD-ILYW 398 (560)
T ss_pred ecccccCCCCcchhccChHHHHHHHHHHHhcCCcCH-HHH----HHHHHhcCchhhhHHHHHHHhhcCCCcchhh-HHHH
Confidence 875432110000 000000 111111111111 111 1111111222222222222221 11111111 1122
Q ss_pred Hhh-ccChhHH-HHHHHHHhcC---C-CCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC-CcEEEeCC
Q 013006 361 LET-TQHPAAA-ASFASIMFAP---Q-GNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE-APYYEISP 433 (451)
Q Consensus 361 ~~~-~~~~~~~-~~~~~~~~~~---~-~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~-~~~~~i~~ 433 (451)
... ..-+... ..+..++... . +.+......-.+++|+||++++.|++|.++|++.+..+.+.+.. .+++.. +
T Consensus 399 n~D~t~lPg~~~~e~l~ly~~N~L~~pG~l~v~G~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs~~~fvl~-~ 477 (560)
T TIGR01839 399 NNDTTRLPAAFHGDLLDMFKSNPLTRPDALEVCGTPIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGGKRRFVLS-N 477 (560)
T ss_pred hCcCccchHHHHHHHHHHHhcCCCCCCCCEEECCEEechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCCCeEEEec-C
Confidence 211 1112221 1122211111 1 23333344446889999999999999999999999999999875 444445 6
Q ss_pred CCCCccc
Q 013006 434 AGHCPHD 440 (451)
Q Consensus 434 ~gH~~~~ 440 (451)
+||.-=+
T Consensus 478 gGHIggi 484 (560)
T TIGR01839 478 SGHIQSI 484 (560)
T ss_pred CCccccc
Confidence 7997443
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.3e-13 Score=144.65 Aligned_cols=220 Identities=14% Similarity=0.127 Sum_probs=137.9
Q ss_pred CccceeeecCCeEEEEeecCCCCCCC----CcEEEecCCCCChhc--HHHHHHhh-cCCceEEEEcCCCCCCCCCCCCCC
Q 013006 134 ITSCFWEWKPKFNVHYEKAGCENVNS----PPVLFLPGFGVGSFH--YEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPT 206 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y~~~g~~~~~~----p~VlllHG~~~~~~~--~~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~ 206 (451)
.+...+...||.+|+.....|.+.+. |+||++||.+..... |...+..| .+||.|+.+|.||-+.-...-.
T Consensus 365 ~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~-- 442 (620)
T COG1506 365 PEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFA-- 442 (620)
T ss_pred ceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHH--
Confidence 34455556689999999888765442 899999999755544 55566666 5689999999997654211000
Q ss_pred CCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCC---CCEEEEEeCcchHHHHHHHHhCCCccce
Q 013006 207 PRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR---EPVYVVGNSLGGFVAVYFAACNPHLVKG 283 (451)
Q Consensus 207 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~---~~v~lvGhS~GG~val~~A~~~P~~v~~ 283 (451)
......||- ..++|+.+.+. ++++.+. +++.|.|||+||++++..+.+.| ++++
T Consensus 443 ---------~~~~~~~g~------------~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a 499 (620)
T COG1506 443 ---------DAIRGDWGG------------VDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKA 499 (620)
T ss_pred ---------HhhhhccCC------------ccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhhe
Confidence 011111211 57888888888 6666643 58999999999999999999988 6777
Q ss_pred EEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhh
Q 013006 284 VTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILET 363 (451)
Q Consensus 284 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (451)
.+...+...|.... .. ..................+ .+.+.
T Consensus 500 ~~~~~~~~~~~~~~-----------~~-----------------------~~~~~~~~~~~~~~~~~~~-~~~~~----- 539 (620)
T COG1506 500 AVAVAGGVDWLLYF-----------GE-----------------------STEGLRFDPEENGGGPPED-REKYE----- 539 (620)
T ss_pred EEeccCcchhhhhc-----------cc-----------------------cchhhcCCHHHhCCCcccC-hHHHH-----
Confidence 77766643211000 00 0000000000000000000 00000
Q ss_pred ccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC----CCcEEEeCCCCCCcc
Q 013006 364 TQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP----EAPYYEISPAGHCPH 439 (451)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp----~~~~~~i~~~gH~~~ 439 (451)
.........++++|+|+|||++|..||.+.+.++.+.+. +++++++|+.+|.+-
T Consensus 540 ----------------------~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~ 597 (620)
T COG1506 540 ----------------------DRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFS 597 (620)
T ss_pred ----------------------hcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCC
Confidence 012233346789999999999999999999888777654 468999999999877
Q ss_pred c
Q 013006 440 D 440 (451)
Q Consensus 440 ~ 440 (451)
.
T Consensus 598 ~ 598 (620)
T COG1506 598 R 598 (620)
T ss_pred C
Confidence 6
|
|
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.54 E-value=7.4e-13 Score=127.04 Aligned_cols=259 Identities=18% Similarity=0.167 Sum_probs=142.8
Q ss_pred CccceeeecCCeEEEEeecCCCC-------CCCCcEEEecCCCCCh-hcH-HHHHHhh-cCCceEEEEcCCCCCCCCCCC
Q 013006 134 ITSCFWEWKPKFNVHYEKAGCEN-------VNSPPVLFLPGFGVGS-FHY-EKQLKDL-GKDYRAWAIDFLGQGMSLPDE 203 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y~~~g~~~-------~~~p~VlllHG~~~~~-~~~-~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~ 203 (451)
.+..+++.+||-.+.+-..-+++ ...|.||++||+.+++ +.| +.++..+ .+||+|++++.||+|.|.-..
T Consensus 93 y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtT 172 (409)
T KOG1838|consen 93 YTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTT 172 (409)
T ss_pred ceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCC
Confidence 45677888888888776553222 2469999999996554 444 4444444 458999999999999986432
Q ss_pred CCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCC---Cc
Q 013006 204 DPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNP---HL 280 (451)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P---~~ 280 (451)
.. -+. ....+|+.+.+..+.+.....++..+|.||||.+.+.|..+.. ..
T Consensus 173 pr-~f~--------------------------ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l 225 (409)
T KOG1838|consen 173 PR-LFT--------------------------AGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPL 225 (409)
T ss_pred Cc-eee--------------------------cCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCc
Confidence 21 111 1244555555555555556678999999999999999988753 35
Q ss_pred cceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHH
Q 013006 281 VKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRI 360 (451)
Q Consensus 281 v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (451)
+.++++++|--. . .......+. ........+...-... +...-+..+..+..+ +...
T Consensus 226 ~~a~~v~~Pwd~---~-------~~~~~~~~~---~~~~~y~~~l~~~l~~------~~~~~r~~~~~~~vd----~d~~ 282 (409)
T KOG1838|consen 226 IAAVAVCNPWDL---L-------AASRSIETP---LYRRFYNRALTLNLKR------IVLRHRHTLFEDPVD----FDVI 282 (409)
T ss_pred eeEEEEeccchh---h-------hhhhHHhcc---cchHHHHHHHHHhHHH------HHhhhhhhhhhccch----hhhh
Confidence 677777776310 0 011111110 0111111111100000 000000000011111 1111
Q ss_pred HhhccChhHHHHHHHHHhcCCCCC---chhHHhhhccCCCCCEEEEeeCCCCCCChHH-HHHHHHHCCCCcEEEeCCCCC
Q 013006 361 LETTQHPAAAASFASIMFAPQGNL---SFREALSRCQMNGVPICLIYGKEDPWVKPVW-GLQVKRQVPEAPYYEISPAGH 436 (451)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~-~~~l~~~lp~~~~~~i~~~gH 436 (451)
.+...-......+..-++...... ........+.+|++|+|+|...+|+++|+.. -....+..|++-+.+-..+||
T Consensus 283 ~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGH 362 (409)
T KOG1838|consen 283 LKSRSVREFDEALTRPMFGFKSVDEYYKKASSSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGH 362 (409)
T ss_pred hhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchhhhcccccccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCce
Confidence 111111111111222222211111 1123455678999999999999999999853 345566678888888888999
Q ss_pred CccccC
Q 013006 437 CPHDEV 442 (451)
Q Consensus 437 ~~~~e~ 442 (451)
..++|.
T Consensus 363 lgfleg 368 (409)
T KOG1838|consen 363 LGFLEG 368 (409)
T ss_pred eeeecc
Confidence 999886
|
|
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=99.53 E-value=8.5e-14 Score=137.22 Aligned_cols=105 Identities=18% Similarity=0.193 Sum_probs=81.9
Q ss_pred CCCCcEEEecCCCCCh--hcHHH-HHHhhc---CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCc
Q 013006 157 VNSPPVLFLPGFGVGS--FHYEK-QLKDLG---KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQP 230 (451)
Q Consensus 157 ~~~p~VlllHG~~~~~--~~~~~-~~~~L~---~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 230 (451)
+++|++|++||++.+. ..|.. +...|. .+++||++|++|+|.|..+...
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~------------------------- 93 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSA------------------------- 93 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCcccc-------------------------
Confidence 3679999999998653 45775 455552 2699999999999988543211
Q ss_pred cccccccCHHHHHHHHHHHHHHh------CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCC
Q 013006 231 WASELAYSVDLWQDQVCYFIKEV------IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPF 292 (451)
Q Consensus 231 ~~~~~~~s~~~~a~dv~~ll~~l------~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~ 292 (451)
.....+++++.++++.| +.++++||||||||.+|..++.++|++|.++++++|+.+
T Consensus 94 ------~~t~~vg~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 94 ------AYTKLVGKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred ------ccHHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 23356667777777755 368999999999999999999999999999999999753
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.6e-13 Score=129.88 Aligned_cols=102 Identities=15% Similarity=0.136 Sum_probs=74.3
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELA 236 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 236 (451)
..|+|||+||++.+...|..+++.|++ ||.|+++|++|++.+..... .
T Consensus 51 ~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~~~-------------------------------i 99 (313)
T PLN00021 51 TYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGTDE-------------------------------I 99 (313)
T ss_pred CCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCchhh-------------------------------H
Confidence 468999999999999999999999975 79999999999653211000 0
Q ss_pred cCHHHHHHHHHHHHHH-------hCCCCEEEEEeCcchHHHHHHHHhCCC-----ccceEEEeccC
Q 013006 237 YSVDLWQDQVCYFIKE-------VIREPVYVVGNSLGGFVAVYFAACNPH-----LVKGVTLLNAT 290 (451)
Q Consensus 237 ~s~~~~a~dv~~ll~~-------l~~~~v~lvGhS~GG~val~~A~~~P~-----~v~~lvl~~~~ 290 (451)
.+..++.+.+.+.++. .+.++++++||||||.+++.+|..+++ +++++|++++.
T Consensus 100 ~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv 165 (313)
T PLN00021 100 KDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPV 165 (313)
T ss_pred HHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccc
Confidence 1122223333322222 234789999999999999999999874 68999999885
|
|
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.6e-13 Score=119.33 Aligned_cols=183 Identities=17% Similarity=0.143 Sum_probs=127.3
Q ss_pred CCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccc
Q 013006 153 GCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWA 232 (451)
Q Consensus 153 g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 232 (451)
.++++..|+||++||+|++...+.+....+..+..++.+. | ..... +..-+|...++..--.
T Consensus 12 ~~~~p~~~~iilLHG~Ggde~~~~~~~~~~~P~~~~is~r--G--~v~~~--------------g~~~~f~~~~~~~~d~ 73 (207)
T COG0400 12 KPGDPAAPLLILLHGLGGDELDLVPLPELILPNATLVSPR--G--PVAEN--------------GGPRFFRRYDEGSFDQ 73 (207)
T ss_pred CCCCCCCcEEEEEecCCCChhhhhhhhhhcCCCCeEEcCC--C--Ccccc--------------CcccceeecCCCccch
Confidence 3445677889999999999988888666666666666553 2 11111 1222222222222224
Q ss_pred cccccCHHHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcC
Q 013006 233 SELAYSVDLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILP 310 (451)
Q Consensus 233 ~~~~~s~~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 310 (451)
+++......+++.+..+.++.++ ++++++|+|.|+++++.+..++|+.+++++++++......
T Consensus 74 edl~~~~~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~--------------- 138 (207)
T COG0400 74 EDLDLETEKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEP--------------- 138 (207)
T ss_pred hhHHHHHHHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCC---------------
Confidence 44556667777777777788777 7899999999999999999999999999999998531000
Q ss_pred CCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHh
Q 013006 311 WSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREAL 390 (451)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (451)
...
T Consensus 139 -----------------------------------------------------------------------------~~~ 141 (207)
T COG0400 139 -----------------------------------------------------------------------------ELL 141 (207)
T ss_pred -----------------------------------------------------------------------------ccc
Confidence 000
Q ss_pred hhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC----CCcEEEeCCCCCCccccChHHHHh
Q 013006 391 SRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP----EAPYYEISPAGHCPHDEVPEVCSL 448 (451)
Q Consensus 391 ~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp----~~~~~~i~~~gH~~~~e~p~~v~~ 448 (451)
. ..-..|+++++|+.|+++|...+.++.+.+. +++..+++ +||-+..+.-+.+.+
T Consensus 142 ~--~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH~i~~e~~~~~~~ 200 (207)
T COG0400 142 P--DLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGHEIPPEELEAARS 200 (207)
T ss_pred c--ccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCCcCCHHHHHHHHH
Confidence 0 1136899999999999999998888777653 46778887 899987766555443
|
|
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.49 E-value=9.2e-13 Score=119.87 Aligned_cols=113 Identities=18% Similarity=0.066 Sum_probs=74.4
Q ss_pred CCCcEEEecCCCCChhcHH---HHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccc
Q 013006 158 NSPPVLFLPGFGVGSFHYE---KQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWAS 233 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~---~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 233 (451)
+.|.||++||.+.+...|. .+...+. .++.|+++|++|++.+...- .+|.-....
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~----------------~~~~~~~~~----- 70 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCW----------------DWFFTHHRA----- 70 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCC----------------CCCCccccC-----
Confidence 4689999999998877765 2333333 47999999999998653210 011110000
Q ss_pred ccccCHHHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 234 ELAYSVDLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 234 ~~~~s~~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
.......++.+.+..+.+...+ ++++|+|||+||.+++.++.++|+++++++.+++.+
T Consensus 71 ~~~~~~~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 71 RGTGEVESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred CCCccHHHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 0001223333333333444444 589999999999999999999999999999998754
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.7e-12 Score=124.36 Aligned_cols=274 Identities=14% Similarity=0.099 Sum_probs=152.6
Q ss_pred CccceeeecCCeEEEEeecCCCC-CC-CCcEEEecCCCCChhcH-HHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCC
Q 013006 134 ITSCFWEWKPKFNVHYEKAGCEN-VN-SPPVLFLPGFGVGSFHY-EKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSK 210 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y~~~g~~~-~~-~p~VlllHG~~~~~~~~-~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~ 210 (451)
+++..+-.++-.+|.......+. .. .|+||++..+.+..... +.+++.|-.+++|+..|+..-+.......
T Consensus 75 v~e~vV~~~~~~~L~~y~~~~~~~~~~~~pvLiV~Pl~g~~~~L~RS~V~~Ll~g~dVYl~DW~~p~~vp~~~~------ 148 (406)
T TIGR01849 75 IRERVVWDKPFCRLIHFKRQGFRAELPGPAVLIVAPMSGHYATLLRSTVEALLPDHDVYITDWVNARMVPLSAG------ 148 (406)
T ss_pred eEEEEEEECCCeEEEEECCCCcccccCCCcEEEEcCCchHHHHHHHHHHHHHhCCCcEEEEeCCCCCCCchhcC------
Confidence 44444444454554444332111 11 37999999987655443 56777775599999999988775421111
Q ss_pred CCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhC-----CCccceEE
Q 013006 211 EGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACN-----PHLVKGVT 285 (451)
Q Consensus 211 ~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~-----P~~v~~lv 285 (451)
.++++++++-+.+++++++.+ ++++|+|+||..++.+++.+ |.++++++
T Consensus 149 -------------------------~f~ldDYi~~l~~~i~~~G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~~~slt 202 (406)
T TIGR01849 149 -------------------------KFDLEDYIDYLIEFIRFLGPD-IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMT 202 (406)
T ss_pred -------------------------CCCHHHHHHHHHHHHHHhCCC-CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEE
Confidence 279999999999999999877 99999999999988777665 67899999
Q ss_pred EeccCCCCCCCCCCCCchHH---------hhhc----CC----CCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhc
Q 013006 286 LLNATPFWGFSPNPIRSPKL---------ARIL----PW----SGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYAD 348 (451)
Q Consensus 286 l~~~~~~~~~~~~~~~~~~~---------~~~~----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (451)
++.++..+... +.....+ .+.. .+ .++...|..+....-.............+++.++...
T Consensus 203 lm~~PID~~~~--p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~~~F~~mnp~r~~~~~~~~~~~l~~g 280 (406)
T TIGR01849 203 LMGGPIDARAS--PTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQLAGFISMNLDRHTKAHSDFFLHLVKG 280 (406)
T ss_pred EEecCccCCCC--CchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHHHHHHHcCcchHHHHHHHHHHHHhcC
Confidence 99986543221 1111111 1100 00 1111233322222111111111111222233222211
Q ss_pred CCCChHH---HHHHHHhhccChhH-H-HHHHHHHh---cCCCCCchhHHhhhccCCC-CCEEEEeeCCCCCCChHHHHHH
Q 013006 349 HATNVDT---VFTRILETTQHPAA-A-ASFASIMF---APQGNLSFREALSRCQMNG-VPICLIYGKEDPWVKPVWGLQV 419 (451)
Q Consensus 349 ~~~~~~~---~~~~~~~~~~~~~~-~-~~~~~~~~---~~~~~~~~~~~~~~l~~i~-~PvLii~G~~D~~v~~~~~~~l 419 (451)
+...... .+..+.....-+.. . ..+...+. ...+.+......-++++|+ +|+|.|.|++|.++++...+.+
T Consensus 281 d~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa 360 (406)
T TIGR01849 281 DGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRVDPGAITRVALLTVEGENDDISGLGQTKAA 360 (406)
T ss_pred CcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCcEEECCEEecHHHCcccceEEEeccCCCcCCHHHhHHH
Confidence 1111111 11111111111111 1 11112211 1223343444445678899 9999999999999999999999
Q ss_pred HHHC---CC--CcEEEeCCCCCCcccc
Q 013006 420 KRQV---PE--APYYEISPAGHCPHDE 441 (451)
Q Consensus 420 ~~~l---p~--~~~~~i~~~gH~~~~e 441 (451)
.+.+ +. .+.++.+++||+-.+-
T Consensus 361 ~~l~~~~~s~~k~~~~~~~~GH~Gvf~ 387 (406)
T TIGR01849 361 LRLCTGIPEDMKRHHLQPGVGHYGVFS 387 (406)
T ss_pred HHHhhcCChhhceEeecCCCCeEEEee
Confidence 8875 43 3466777899986654
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.3e-11 Score=115.78 Aligned_cols=243 Identities=19% Similarity=0.196 Sum_probs=145.0
Q ss_pred CCcEEEecCCCCChhcHHHHHHhhc----CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccc
Q 013006 159 SPPVLFLPGFGVGSFHYEKQLKDLG----KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASE 234 (451)
Q Consensus 159 ~p~VlllHG~~~~~~~~~~~~~~L~----~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 234 (451)
+..|||++|.++-.+.|..++..|. .++.|+++.+.||-.+....... .+.
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~-------------------------~~~ 56 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFS-------------------------PNG 56 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCccccccc-------------------------CCC
Confidence 3579999999999999999988873 36999999999998775431100 001
Q ss_pred cccCHHHHHHHHHHHHHHhCC------CCEEEEEeCcchHHHHHHHHhCC---CccceEEEeccCCCCCCCCCCCCchHH
Q 013006 235 LAYSVDLWQDQVCYFIKEVIR------EPVYVVGNSLGGFVAVYFAACNP---HLVKGVTLLNATPFWGFSPNPIRSPKL 305 (451)
Q Consensus 235 ~~~s~~~~a~dv~~ll~~l~~------~~v~lvGhS~GG~val~~A~~~P---~~v~~lvl~~~~~~~~~~~~~~~~~~~ 305 (451)
..|+++++++...++++++.. .+++|+|||+|++++++++.+++ .+|.+++++-|+.. ..........+
T Consensus 57 ~~~sL~~QI~hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~--~ia~Sp~G~~l 134 (266)
T PF10230_consen 57 RLFSLQDQIEHKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIE--DIAKSPNGRRL 134 (266)
T ss_pred CccCHHHHHHHHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccc--cccCCchhHHH
Confidence 138999999988888887633 56999999999999999999999 78999999998632 11111111122
Q ss_pred hhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHH----HhcCC
Q 013006 306 ARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASI----MFAPQ 381 (451)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 381 (451)
..+..+ .+........ ...-...-|..+..++.+.+.... +............+........+ |....
T Consensus 135 ~~~~~~---~~~~~~~~~~--~~~l~~~lP~~~~~~lv~~~~~~~---~~~~~~t~~~l~~~~~v~qaL~Ma~~Em~~I~ 206 (266)
T PF10230_consen 135 TPLLFS---PPPLVWLASF--LSFLLSLLPESVLRWLVRWVMGFP---PPAVEATTKFLLSPRVVRQALYMARDEMREIR 206 (266)
T ss_pred HHHHhh---ccHHHHHHHH--HHHHHHHCCHHHHHHHHHHHcCCC---hHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcc
Confidence 221111 1111111111 111112345555555554444433 12333333333343332222111 11111
Q ss_pred CCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCC--cEEE-eCCCCCC
Q 013006 382 GNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEA--PYYE-ISPAGHC 437 (451)
Q Consensus 382 ~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~--~~~~-i~~~gH~ 437 (451)
..+..+.......-..++.+.+|.+|.|+|.+..+++.+..|+. ++.+ .++..|.
T Consensus 207 -~~d~~~~~~~~~~~~~kl~f~fg~~D~Wvp~~~~~~l~~~~~~~~~~~~v~~~~i~Ha 264 (266)
T PF10230_consen 207 -EDDNDELIKHHNENGDKLWFYFGQNDHWVPNETRDELIERYPGHEPDVVVDEEGIPHA 264 (266)
T ss_pred -CcchHHHHHHhccCCCEEEEEEeCCCCCCCHHHHHHHHHHcCCCCCeEEEecCCCCCC
Confidence 11112333333333678999999999999999999999999943 3322 2445554
|
|
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.5e-12 Score=135.22 Aligned_cols=120 Identities=12% Similarity=0.046 Sum_probs=88.9
Q ss_pred eecCCeEEEEeecCCCC-CCCCcEEEecCCCCChh---cHH-HHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013006 140 EWKPKFNVHYEKAGCEN-VNSPPVLFLPGFGVGSF---HYE-KQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGD 213 (451)
Q Consensus 140 ~~~~g~~l~y~~~g~~~-~~~p~VlllHG~~~~~~---~~~-~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~ 213 (451)
+..||++|++..+.|.+ .+.|+||++||++.+.. .+. .....| .+||.|+++|+||+|.|+.....
T Consensus 2 ~~~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~-------- 73 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDL-------- 73 (550)
T ss_pred cCCCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEe--------
Confidence 35689999977665532 35689999999987653 222 233444 56899999999999999743211
Q ss_pred chhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhC-----CCCEEEEEeCcchHHHHHHHHhCCCccceEEEec
Q 013006 214 STEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI-----REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLN 288 (451)
Q Consensus 214 ~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~-----~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~ 288 (451)
++ ...++|+.++++.+. ..++.++|||+||.+++.+|..+|++++++|..+
T Consensus 74 -----------------------~~-~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~ 129 (550)
T TIGR00976 74 -----------------------LG-SDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQE 129 (550)
T ss_pred -----------------------cC-cccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecC
Confidence 12 345667777776653 2589999999999999999999999999999988
Q ss_pred cCC
Q 013006 289 ATP 291 (451)
Q Consensus 289 ~~~ 291 (451)
+..
T Consensus 130 ~~~ 132 (550)
T TIGR00976 130 GVW 132 (550)
T ss_pred ccc
Confidence 753
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.3e-12 Score=119.17 Aligned_cols=186 Identities=18% Similarity=0.184 Sum_probs=102.8
Q ss_pred CCCCCcEEEecCCCCChhcHHHHHHh-h-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhh--hccccCCCCCCcc
Q 013006 156 NVNSPPVLFLPGFGVGSFHYEKQLKD-L-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEK--NFLWGFGDKAQPW 231 (451)
Q Consensus 156 ~~~~p~VlllHG~~~~~~~~~~~~~~-L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~--~~~w~~~~~~~~~ 231 (451)
.+..++|||+||+|.+...|..+... + ..+.+++.++-|-.-... .. +. ..||.........
T Consensus 11 ~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~--~~------------g~~~~~Wf~~~~~~~~~ 76 (216)
T PF02230_consen 11 GKAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTV--PG------------GYRMPAWFDIYDFDPEG 76 (216)
T ss_dssp ST-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GG--GT------------T-EEE-SS-BSCSSSSS
T ss_pred CCCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCccc--cc------------ccCCCceeeccCCCcch
Confidence 34678999999999999777766652 2 235778877655310000 00 00 0111111111000
Q ss_pred ccccccCHHHHHHHHHHHHHHh-----CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHh
Q 013006 232 ASELAYSVDLWQDQVCYFIKEV-----IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLA 306 (451)
Q Consensus 232 ~~~~~~s~~~~a~dv~~ll~~l-----~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 306 (451)
..-.-.++..++.+.++++.. ..++++|.|+|.||++++.++.++|+.+.++|.+++....
T Consensus 77 -~~~~~~i~~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~------------- 142 (216)
T PF02230_consen 77 -PEDEAGIEESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPP------------- 142 (216)
T ss_dssp -EB-HHHHHHHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TT-------------
T ss_pred -hhhHHHHHHHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccc-------------
Confidence 000123344444555555542 3368999999999999999999999999999999974210
Q ss_pred hhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCch
Q 013006 307 RILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSF 386 (451)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (451)
.. . .
T Consensus 143 -----------------------------------------~~---------------------------------~--~ 146 (216)
T PF02230_consen 143 -----------------------------------------ES---------------------------------E--L 146 (216)
T ss_dssp -----------------------------------------GC---------------------------------C--C
T ss_pred -----------------------------------------cc---------------------------------c--c
Confidence 00 0 0
Q ss_pred hHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC----CCcEEEeCCCCCCccccChHHHH
Q 013006 387 REALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP----EAPYYEISPAGHCPHDEVPEVCS 447 (451)
Q Consensus 387 ~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp----~~~~~~i~~~gH~~~~e~p~~v~ 447 (451)
.+..... -++|++++||++|+++|.+.++...+.+. +++++.+++.||.+..+.-+.+.
T Consensus 147 ~~~~~~~--~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~~~~~~~~~ 209 (216)
T PF02230_consen 147 EDRPEAL--AKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEISPEELRDLR 209 (216)
T ss_dssp HCCHCCC--CTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS--HHHHHHHH
T ss_pred ccccccc--CCCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCCHHHHHHHH
Confidence 0001111 17899999999999999988877766653 46789999999988754444433
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.5e-12 Score=112.37 Aligned_cols=254 Identities=18% Similarity=0.254 Sum_probs=140.2
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhcc
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFL 221 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~ 221 (451)
||..+....+...++....|++-.+++.....|+.++..+++ +|.|+.+|+||.|+|.+.... ...
T Consensus 14 DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~-------------~~~ 80 (281)
T COG4757 14 DGYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLS-------------GSQ 80 (281)
T ss_pred CCccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccc-------------cCc
Confidence 444444444433333334677777788888889999999855 899999999999999764321 112
Q ss_pred ccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCC
Q 013006 222 WGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIR 301 (451)
Q Consensus 222 w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~ 301 (451)
|+|.| ....|+...|..+-+.+...+.+.||||+||.+.- ++.++| ++.+....+..+.|.-. ...
T Consensus 81 ~~~~D----------wA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~g-L~~~~~-k~~a~~vfG~gagwsg~--m~~ 146 (281)
T COG4757 81 WRYLD----------WARLDFPAALAALKKALPGHPLYFVGHSFGGQALG-LLGQHP-KYAAFAVFGSGAGWSGW--MGL 146 (281)
T ss_pred cchhh----------hhhcchHHHHHHHHhhCCCCceEEeeccccceeec-ccccCc-ccceeeEeccccccccc--hhh
Confidence 32221 22333344444444455667899999999998644 445566 67777777765532110 000
Q ss_pred chHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHH-HHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcC
Q 013006 302 SPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVL-KQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAP 380 (451)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (451)
...+....-|.-..+.-.. ....+ +.++...+...-..+..+....+.+... +.
T Consensus 147 ~~~l~~~~l~~lv~p~lt~-----------------w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~-------fd- 201 (281)
T COG4757 147 RERLGAVLLWNLVGPPLTF-----------------WKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYY-------FD- 201 (281)
T ss_pred hhcccceeeccccccchhh-----------------ccccCcHhhcCCCccCcchHHHHHHHHhcCcccc-------cc-
Confidence 0000000001000000000 00111 1112222222223333333333332110 00
Q ss_pred CCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEE--EeCC----CCCCccccCh-HHHHhhh
Q 013006 381 QGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYY--EISP----AGHCPHDEVP-EVCSLCL 450 (451)
Q Consensus 381 ~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~--~i~~----~gH~~~~e~p-~~v~~~I 450 (451)
.-......+..+.+.+|++++...+|+++|+...+.+.+..+++.+. .++. -||+-..-+| |.+.+++
T Consensus 202 --dp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~ 276 (281)
T COG4757 202 --DPAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEM 276 (281)
T ss_pred --ChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHH
Confidence 00112233445678999999999999999999999999999987544 4443 4999888887 6665554
|
|
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=99.43 E-value=7.8e-13 Score=120.44 Aligned_cols=178 Identities=19% Similarity=0.219 Sum_probs=101.9
Q ss_pred HHHHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh
Q 013006 175 YEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV 253 (451)
Q Consensus 175 ~~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l 253 (451)
|......| .+||.|+.+|+||.+.....-.. .....| ....++|..+.+..+++.-
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~-----------~~~~~~------------~~~~~~D~~~~i~~l~~~~ 59 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHE-----------AGRGDW------------GQADVDDVVAAIEYLIKQY 59 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHH-----------TTTTGT------------THHHHHHHHHHHHHHHHTT
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHH-----------hhhccc------------cccchhhHHHHHHHHhccc
Confidence 34556677 56899999999998754211000 000000 0134555555555555543
Q ss_pred --CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHh
Q 013006 254 --IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQK 331 (451)
Q Consensus 254 --~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (451)
..+++.++|+|+||.+++.++.++|+++++++..++...+.... ..
T Consensus 60 ~iD~~ri~i~G~S~GG~~a~~~~~~~~~~f~a~v~~~g~~d~~~~~---------------------~~----------- 107 (213)
T PF00326_consen 60 YIDPDRIGIMGHSYGGYLALLAATQHPDRFKAAVAGAGVSDLFSYY---------------------GT----------- 107 (213)
T ss_dssp SEEEEEEEEEEETHHHHHHHHHHHHTCCGSSEEEEESE-SSTTCSB---------------------HH-----------
T ss_pred cccceeEEEEcccccccccchhhcccceeeeeeeccceecchhccc---------------------cc-----------
Confidence 34789999999999999999999999999999999853211000 00
Q ss_pred cCChHHHHH-HHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccC--CCCCEEEEeeCCC
Q 013006 332 ISDPESIAE-VLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQM--NGVPICLIYGKED 408 (451)
Q Consensus 332 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--i~~PvLii~G~~D 408 (451)
... ... .... +.... .....+.. ......+.+ +++|+|+++|++|
T Consensus 108 -~~~--~~~~~~~~-~~~~~-~~~~~~~~---------------------------~s~~~~~~~~~~~~P~li~hG~~D 155 (213)
T PF00326_consen 108 -TDI--YTKAEYLE-YGDPW-DNPEFYRE---------------------------LSPISPADNVQIKPPVLIIHGEND 155 (213)
T ss_dssp -TCC--HHHGHHHH-HSSTT-TSHHHHHH---------------------------HHHGGGGGGCGGGSEEEEEEETTB
T ss_pred -ccc--cccccccc-cCccc-hhhhhhhh---------------------------hccccccccccCCCCEEEEccCCC
Confidence 000 000 0000 00000 01111111 111222233 6899999999999
Q ss_pred CCCChHHHHHHHHHCC----CCcEEEeCCCCCCcc
Q 013006 409 PWVKPVWGLQVKRQVP----EAPYYEISPAGHCPH 439 (451)
Q Consensus 409 ~~v~~~~~~~l~~~lp----~~~~~~i~~~gH~~~ 439 (451)
..||+..+.++.+.+. .++++++|++||.+.
T Consensus 156 ~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~ 190 (213)
T PF00326_consen 156 PRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFG 190 (213)
T ss_dssp SSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTT
T ss_pred CccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCC
Confidence 9999998887766653 378999999999544
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.1e-11 Score=118.77 Aligned_cols=244 Identities=20% Similarity=0.153 Sum_probs=129.5
Q ss_pred CccceeeecCCeEEEEeecCCC--CCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCC
Q 013006 134 ITSCFWEWKPKFNVHYEKAGCE--NVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKE 211 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y~~~g~~--~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~ 211 (451)
+-.-.++..+|..|+-...-|. +.+-|.||.+||.++....|...+.....|+-|+.+|.||+|.............
T Consensus 56 vy~v~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~- 134 (320)
T PF05448_consen 56 VYDVSFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLPWAAAGYAVLAMDVRGQGGRSPDYRGSSGGT- 134 (320)
T ss_dssp EEEEEEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHHHHHTT-EEEEE--TTTSSSS-B-SSBSSS--
T ss_pred EEEEEEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccccccCCeEEEEecCCCCCCCCCCccccCCCC-
Confidence 3345555668888887766654 2345889999999999888887777667899999999999994332211100000
Q ss_pred CCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh------CCCCEEEEEeCcchHHHHHHHHhCCCccceEE
Q 013006 212 GDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV------IREPVYVVGNSLGGFVAVYFAACNPHLVKGVT 285 (451)
Q Consensus 212 ~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l------~~~~v~lvGhS~GG~val~~A~~~P~~v~~lv 285 (451)
.......|..+.. + .+-+..+..|....++.+ +.+++.+.|.|+||.+++.+|+..| +|++++
T Consensus 135 ----~~g~~~~g~~~~~----e--~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~ 203 (320)
T PF05448_consen 135 ----LKGHITRGIDDNP----E--DYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAA 203 (320)
T ss_dssp ----SSSSTTTTTTS-T----T--T-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEE
T ss_pred ----CccHHhcCccCch----H--HHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEE
Confidence 0111112222201 1 123334445555555544 2367999999999999999999986 699999
Q ss_pred EeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhcc
Q 013006 286 LLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQ 365 (451)
Q Consensus 286 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (451)
...|..- ........... ...-..+..+++. ........++.++.
T Consensus 204 ~~vP~l~---------------------------d~~~~~~~~~~-~~~y~~~~~~~~~-~d~~~~~~~~v~~~------ 248 (320)
T PF05448_consen 204 ADVPFLC---------------------------DFRRALELRAD-EGPYPEIRRYFRW-RDPHHEREPEVFET------ 248 (320)
T ss_dssp EESESSS---------------------------SHHHHHHHT---STTTHHHHHHHHH-HSCTHCHHHHHHHH------
T ss_pred ecCCCcc---------------------------chhhhhhcCCc-cccHHHHHHHHhc-cCCCcccHHHHHHH------
Confidence 9887420 01111000000 0000111111110 00111111111111
Q ss_pred ChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC-CcEEEeCCCCCCccccC
Q 013006 366 HPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE-APYYEISPAGHCPHDEV 442 (451)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~-~~~~~i~~~gH~~~~e~ 442 (451)
+.+.|...-.++|+||+++-.|-.|+++||.....+.+.++. .++.++|..||....+.
T Consensus 249 ------------------L~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~~~~~ 308 (320)
T PF05448_consen 249 ------------------LSYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEYGPEF 308 (320)
T ss_dssp ------------------HHTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SSTTHHH
T ss_pred ------------------HhhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCchhhH
Confidence 112355555577999999999999999999999999998874 67899999999866554
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=99.43 E-value=5.1e-13 Score=126.05 Aligned_cols=115 Identities=17% Similarity=0.185 Sum_probs=83.6
Q ss_pred CeEEEEeecCCCCCCCCcEEEecCCCCCh-hcHHHHH-Hh-hc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhh
Q 013006 144 KFNVHYEKAGCENVNSPPVLFLPGFGVGS-FHYEKQL-KD-LG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKN 219 (451)
Q Consensus 144 g~~l~y~~~g~~~~~~p~VlllHG~~~~~-~~~~~~~-~~-L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~ 219 (451)
+..+.+..+.+ ++|++|++||++++. ..|...+ .. |. .+++|+++|+++++.+..+.
T Consensus 24 ~~~~~~~~f~~---~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~---------------- 84 (275)
T cd00707 24 PSSLKNSNFNP---SRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQ---------------- 84 (275)
T ss_pred hhhhhhcCCCC---CCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHH----------------
Confidence 34444444443 578999999999887 6776554 33 44 46999999999984332110
Q ss_pred ccccCCCCCCccccccccCHHHHHHHHHHHHHHh------CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCC
Q 013006 220 FLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV------IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPF 292 (451)
Q Consensus 220 ~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l------~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~ 292 (451)
...+++.+.+++..+++.+ ..++++||||||||.+|..++.++|++|+++++++|+.+
T Consensus 85 ---------------a~~~~~~v~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 85 ---------------AVNNTRVVGAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred ---------------HHHhHHHHHHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 0135555666666666654 347899999999999999999999999999999998753
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.3e-11 Score=114.79 Aligned_cols=119 Identities=15% Similarity=0.206 Sum_probs=101.7
Q ss_pred cCCeEEEEeecCCCCC----CCCcEEEecCCCCChhcHHHHHHhhcC----------CceEEEEcCCCCCCCCCCCCCCC
Q 013006 142 KPKFNVHYEKAGCENV----NSPPVLFLPGFGVGSFHYEKQLKDLGK----------DYRAWAIDFLGQGMSLPDEDPTP 207 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~~----~~p~VlllHG~~~~~~~~~~~~~~L~~----------~~~Vi~~D~rG~G~S~~~~~~~~ 207 (451)
-.|++|||....++.. .-.|||++||++++-..+..+++.|.+ .|.||++.+||+|.|+.+...-
T Consensus 131 IeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~G- 209 (469)
T KOG2565|consen 131 IEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTG- 209 (469)
T ss_pred hcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCC-
Confidence 3699999998876421 125899999999999999999998843 2789999999999998766542
Q ss_pred CCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEe
Q 013006 208 RSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLL 287 (451)
Q Consensus 208 ~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~ 287 (451)
++..+.|.-++.++=.||..++.|-|-.||+.|+..+|..+|++|.|+-+-
T Consensus 210 -----------------------------Fn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHln 260 (469)
T KOG2565|consen 210 -----------------------------FNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLN 260 (469)
T ss_pred -----------------------------ccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhc
Confidence 688889999999999999999999999999999999999999999998765
Q ss_pred ccC
Q 013006 288 NAT 290 (451)
Q Consensus 288 ~~~ 290 (451)
.+.
T Consensus 261 m~~ 263 (469)
T KOG2565|consen 261 MCF 263 (469)
T ss_pred ccc
Confidence 543
|
|
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.7e-11 Score=118.60 Aligned_cols=221 Identities=18% Similarity=0.133 Sum_probs=115.5
Q ss_pred CccceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHH-HHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCC
Q 013006 134 ITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQ-LKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKE 211 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~-~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~ 211 (451)
++...+.+.++.-..|....+.+...|+||++-|+-+-...+..+ .+.| .+|+.++++|.||.|.|...+-.
T Consensus 165 i~~v~iP~eg~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~------ 238 (411)
T PF06500_consen 165 IEEVEIPFEGKTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLT------ 238 (411)
T ss_dssp EEEEEEEETTCEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-------
T ss_pred cEEEEEeeCCcEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCC------
Confidence 444444444432223333333333457777777777766665444 4556 57999999999999998532211
Q ss_pred CCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhC---CCCEEEEEeCcchHHHHHHHHhCCCccceEEEec
Q 013006 212 GDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI---REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLN 288 (451)
Q Consensus 212 ~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~---~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~ 288 (451)
.+.+.+...|.+.+.... ..+|.++|.|+||.+|.++|..+++|++++|.++
T Consensus 239 -------------------------~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~G 293 (411)
T PF06500_consen 239 -------------------------QDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALG 293 (411)
T ss_dssp -------------------------S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES
T ss_pred -------------------------cCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeC
Confidence 122334455555555543 3689999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChh
Q 013006 289 ATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPA 368 (451)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (451)
+.... + +... . .....|......+...+.......+....+.....
T Consensus 294 a~vh~-~-------------------------ft~~---~-~~~~~P~my~d~LA~rlG~~~~~~~~l~~el~~~S---- 339 (411)
T PF06500_consen 294 APVHH-F-------------------------FTDP---E-WQQRVPDMYLDVLASRLGMAAVSDESLRGELNKFS---- 339 (411)
T ss_dssp ---SC-G-------------------------GH-H---H-HHTTS-HHHHHHHHHHCT-SCE-HHHHHHHGGGGS----
T ss_pred chHhh-h-------------------------hccH---H-HHhcCCHHHHHHHHHHhCCccCCHHHHHHHHHhcC----
Confidence 85310 0 0000 0 00011222233333333322222222111111110
Q ss_pred HHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCC
Q 013006 369 AAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAG 435 (451)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~g 435 (451)
+.....+. -++..+|+|.+.|++|+++|.+..+-++..-.+.+...++...
T Consensus 340 ---------------Lk~qGlL~-~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~gk~~~~~~~~ 390 (411)
T PF06500_consen 340 ---------------LKTQGLLS-GRRCPTPLLAINGEDDPVSPIEDSRLIAESSTDGKALRIPSKP 390 (411)
T ss_dssp ---------------TTTTTTTT-SS-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT-EEEEE-SSS
T ss_pred ---------------cchhcccc-CCCCCcceEEeecCCCCCCCHHHHHHHHhcCCCCceeecCCCc
Confidence 00011111 1567899999999999999999999999988777888887544
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=99.38 E-value=7.5e-12 Score=109.00 Aligned_cols=154 Identities=21% Similarity=0.263 Sum_probs=102.5
Q ss_pred EEEecCCCCC-hhcHHHHHHh-hcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCH
Q 013006 162 VLFLPGFGVG-SFHYEKQLKD-LGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSV 239 (451)
Q Consensus 162 VlllHG~~~~-~~~~~~~~~~-L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~ 239 (451)
|+++||++++ ..+|....+. |...++|-.+|+ . . -+.
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~~~V~~~~~------~---~--------------------------------P~~ 39 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENSVRVEQPDW------D---N--------------------------------PDL 39 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTSEEEEEC--------T---S----------------------------------H
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCCeEEecccc------C---C--------------------------------CCH
Confidence 6899999777 5678876654 655577877776 1 1 378
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHH-HhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCCh
Q 013006 240 DLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFA-ACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLP 318 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A-~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (451)
++|.+.+..-+..+. +++++||||+|+..++.++ .....+|++++|+++.-.. ..........
T Consensus 40 ~~W~~~l~~~i~~~~-~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~----------~~~~~~~~~~----- 103 (171)
T PF06821_consen 40 DEWVQALDQAIDAID-EPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPD----------DPEPFPPELD----- 103 (171)
T ss_dssp HHHHHHHHHCCHC-T-TTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCG----------CHHCCTCGGC-----
T ss_pred HHHHHHHHHHHhhcC-CCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcc----------cccchhhhcc-----
Confidence 888888887777653 5699999999999999999 7778899999999985210 0000000000
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCC
Q 013006 319 ASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGV 398 (451)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 398 (451)
.+ .. . ......+
T Consensus 104 ----------------------------------------------------------------~f--~~-~-p~~~l~~ 115 (171)
T PF06821_consen 104 ----------------------------------------------------------------GF--TP-L-PRDPLPF 115 (171)
T ss_dssp ----------------------------------------------------------------CC--TT-S-HCCHHHC
T ss_pred ----------------------------------------------------------------cc--cc-C-cccccCC
Confidence 00 00 0 0112356
Q ss_pred CEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCcccc
Q 013006 399 PICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDE 441 (451)
Q Consensus 399 PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e 441 (451)
|.++|.+++|+++|.+.++++++.+ +++++.++++||+.-.+
T Consensus 116 ~~~viaS~nDp~vp~~~a~~~A~~l-~a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 116 PSIVIASDNDPYVPFERAQRLAQRL-GAELIILGGGGHFNAAS 157 (171)
T ss_dssp CEEEEEETTBSSS-HHHHHHHHHHH-T-EEEEETS-TTSSGGG
T ss_pred CeEEEEcCCCCccCHHHHHHHHHHc-CCCeEECCCCCCccccc
Confidence 7799999999999999999999999 88999999999997654
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.37 E-value=5.6e-12 Score=115.24 Aligned_cols=173 Identities=17% Similarity=0.169 Sum_probs=106.9
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELA 236 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 236 (451)
+.|.||++|++.+-....+.+++.|+ +||.|+++|+-+-..... .... .....|. ....
T Consensus 13 ~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~-~~~~----------~~~~~~~---------~~~~ 72 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPP-SDPE----------EAFAAMR---------ELFA 72 (218)
T ss_dssp SEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--C-CCHH----------CHHHHHH---------HCHH
T ss_pred CCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCc-cchh----------hHHHHHH---------HHHh
Confidence 46899999998877777777888885 489999999865444111 1100 0011110 0000
Q ss_pred cCHHHHHHHHHHHHHHhC------CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcC
Q 013006 237 YSVDLWQDQVCYFIKEVI------REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILP 310 (451)
Q Consensus 237 ~s~~~~a~dv~~ll~~l~------~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 310 (451)
-..+...+++...++.+. .+++.++|+|+||.+++.+|.+. ..+++++..-+...
T Consensus 73 ~~~~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~------------------ 133 (218)
T PF01738_consen 73 PRPEQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSP------------------ 133 (218)
T ss_dssp HSHHHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSS------------------
T ss_pred hhHHHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCC------------------
Confidence 124566677766666662 35899999999999999999887 57999988775100
Q ss_pred CCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHh
Q 013006 311 WSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREAL 390 (451)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (451)
.....
T Consensus 134 ---------------------------------------------------------------------------~~~~~ 138 (218)
T PF01738_consen 134 ---------------------------------------------------------------------------PPPPL 138 (218)
T ss_dssp ---------------------------------------------------------------------------GGGHH
T ss_pred ---------------------------------------------------------------------------CCcch
Confidence 01112
Q ss_pred hhccCCCCCEEEEeeCCCCCCChHHHHHHHHHC----CCCcEEEeCCCCCCccccChH
Q 013006 391 SRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQV----PEAPYYEISPAGHCPHDEVPE 444 (451)
Q Consensus 391 ~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l----p~~~~~~i~~~gH~~~~e~p~ 444 (451)
....++++|+++++|++|+.++.+..+.+.+.+ ...++++++|++|.+......
T Consensus 139 ~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~ 196 (218)
T PF01738_consen 139 EDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRP 196 (218)
T ss_dssp HHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTST
T ss_pred hhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCc
Confidence 223457899999999999999999777666655 457899999999987765433
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.7e-11 Score=111.55 Aligned_cols=99 Identities=23% Similarity=0.373 Sum_probs=84.3
Q ss_pred CcEEEecCCCCChhcHHHHHHhhcCC-ceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccC
Q 013006 160 PPVLFLPGFGVGSFHYEKQLKDLGKD-YRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYS 238 (451)
Q Consensus 160 p~VlllHG~~~~~~~~~~~~~~L~~~-~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s 238 (451)
++|+++|+.+++...|..+++.|... +.|+.++.+|.+..... ..+
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~~---------------------------------~~s 47 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDEPP---------------------------------PDS 47 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSHE---------------------------------ESS
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCCC---------------------------------CCC
Confidence 47999999999999999999999997 99999999999833221 159
Q ss_pred HHHHHHHHHHHHHHhCCC-CEEEEEeCcchHHHHHHHHhC---CCccceEEEeccCC
Q 013006 239 VDLWQDQVCYFIKEVIRE-PVYVVGNSLGGFVAVYFAACN---PHLVKGVTLLNATP 291 (451)
Q Consensus 239 ~~~~a~dv~~ll~~l~~~-~v~lvGhS~GG~val~~A~~~---P~~v~~lvl~~~~~ 291 (451)
++++++...+.|.....+ +++|+|||+||.+|+++|.+. ...|..++++++.+
T Consensus 48 i~~la~~y~~~I~~~~~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~ 104 (229)
T PF00975_consen 48 IEELASRYAEAIRARQPEGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSPP 104 (229)
T ss_dssp HHHHHHHHHHHHHHHTSSSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCSS
T ss_pred HHHHHHHHHHHhhhhCCCCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecCCC
Confidence 999999998888887665 999999999999999999863 45699999999754
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=99.35 E-value=4.2e-11 Score=125.28 Aligned_cols=131 Identities=16% Similarity=0.064 Sum_probs=91.6
Q ss_pred eeeecCCeEEEEeecCCCC-------CCCCcEEEecCCCCChhcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCC
Q 013006 138 FWEWKPKFNVHYEKAGCEN-------VNSPPVLFLPGFGVGSFHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRS 209 (451)
Q Consensus 138 ~~~~~~g~~l~y~~~g~~~-------~~~p~VlllHG~~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~ 209 (451)
.+...++.++.|...|.+. ...|+|||+||++++...|..++..|+ ++|+|+++|+||||.|.........+
T Consensus 421 ~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~ 500 (792)
T TIGR03502 421 LLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVN 500 (792)
T ss_pred EEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCcccccccccccc
Confidence 5566778888888765431 123689999999999999999999996 58999999999999995431111000
Q ss_pred CCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhC----------------CCCEEEEEeCcchHHHHHH
Q 013006 210 KEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI----------------REPVYVVGNSLGGFVAVYF 273 (451)
Q Consensus 210 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~----------------~~~v~lvGhS~GG~val~~ 273 (451)
-.....++|.+..... -....+++.+.|+..+...+. ..+++++||||||.++..+
T Consensus 501 ------a~~~~~~~y~Nl~~l~--~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~ 572 (792)
T TIGR03502 501 ------ATNANVLAYMNLASLL--VARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSF 572 (792)
T ss_pred ------ccccCccceecccccc--ccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHH
Confidence 0011112222210000 012478999999999988886 2489999999999999999
Q ss_pred HHh
Q 013006 274 AAC 276 (451)
Q Consensus 274 A~~ 276 (451)
+..
T Consensus 573 ~~~ 575 (792)
T TIGR03502 573 IAY 575 (792)
T ss_pred HHh
Confidence 975
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.1e-11 Score=93.08 Aligned_cols=78 Identities=27% Similarity=0.341 Sum_probs=66.2
Q ss_pred CeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccc
Q 013006 144 KFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLW 222 (451)
Q Consensus 144 g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w 222 (451)
|.+|+|+.+.|+++.+.+|+++||++..+..|..++..|++ +|.|+++|+||||.|+.....
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~----------------- 63 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGH----------------- 63 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccc-----------------
Confidence 67899999998766577999999999999999999999965 799999999999999743221
Q ss_pred cCCCCCCccccccccCHHHHHHHHHHHHH
Q 013006 223 GFGDKAQPWASELAYSVDLWQDQVCYFIK 251 (451)
Q Consensus 223 ~~~~~~~~~~~~~~~s~~~~a~dv~~ll~ 251 (451)
.-+++++++|+..+++
T Consensus 64 -------------~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 64 -------------IDSFDDYVDDLHQFIQ 79 (79)
T ss_pred -------------cCCHHHHHHHHHHHhC
Confidence 1488999999998874
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.7e-10 Score=111.48 Aligned_cols=99 Identities=16% Similarity=0.127 Sum_probs=71.3
Q ss_pred CCCcEEEecCCC---CChhcHHHHHHhhcC--CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccc
Q 013006 158 NSPPVLFLPGFG---VGSFHYEKQLKDLGK--DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWA 232 (451)
Q Consensus 158 ~~p~VlllHG~~---~~~~~~~~~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 232 (451)
..|+||++||.+ ++...|+.+...|++ ++.|+.+|+|...... .+
T Consensus 80 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~-----~p------------------------- 129 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEAR-----FP------------------------- 129 (318)
T ss_pred CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCC-----CC-------------------------
Confidence 468999999976 556678888888864 7999999999643321 11
Q ss_pred cccccCHHHHHHH---HHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhC------CCccceEEEeccC
Q 013006 233 SELAYSVDLWQDQ---VCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACN------PHLVKGVTLLNAT 290 (451)
Q Consensus 233 ~~~~~s~~~~a~d---v~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~------P~~v~~lvl~~~~ 290 (451)
..+++..+. +.+..+.+++ ++++|+|+|+||.+++.++.+. +.++++++++.+.
T Consensus 130 ----~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~ 194 (318)
T PRK10162 130 ----QAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGL 194 (318)
T ss_pred ----CcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCc
Confidence 234444333 3333445655 5899999999999999988753 3579999999875
|
|
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.3e-10 Score=108.12 Aligned_cols=226 Identities=15% Similarity=0.179 Sum_probs=88.3
Q ss_pred CCCcEEEecCCCCChhc---HHHHHHhhcC-CceEEEEcCC----CCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCC
Q 013006 158 NSPPVLFLPGFGVGSFH---YEKQLKDLGK-DYRAWAIDFL----GQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQ 229 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~---~~~~~~~L~~-~~~Vi~~D~r----G~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 229 (451)
....||||.|++.+... ...++..|.. +|.|+-+-++ |+|.+
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~------------------------------ 81 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTS------------------------------ 81 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S-------------------------------
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcc------------------------------
Confidence 34579999999876543 5667788854 7999888765 44433
Q ss_pred ccccccccCHHHHHHHHHHHHHHh--------CCCCEEEEEeCcchHHHHHHHHhCC-----CccceEEEeccCCCCCCC
Q 013006 230 PWASELAYSVDLWQDQVCYFIKEV--------IREPVYVVGNSLGGFVAVYFAACNP-----HLVKGVTLLNATPFWGFS 296 (451)
Q Consensus 230 ~~~~~~~~s~~~~a~dv~~ll~~l--------~~~~v~lvGhS~GG~val~~A~~~P-----~~v~~lvl~~~~~~~~~~ 296 (451)
+++.-++||.++++.+ +.++|+|+|||.|+.-+++|+.... ..|+++||-+|...-...
T Consensus 82 --------SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~ 153 (303)
T PF08538_consen 82 --------SLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAI 153 (303)
T ss_dssp ---------HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTST
T ss_pred --------hhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHh
Confidence 6666666776666654 3468999999999999999998752 579999999997421111
Q ss_pred CCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCC-ChHHHHHHHHhhccChhHHHHHHH
Q 013006 297 PNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHAT-NVDTVFTRILETTQHPAAAASFAS 375 (451)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 375 (451)
.... .. .....++.+.....+... .-.+.+...+..... ..+-...+++...........|..
T Consensus 154 ~~~~--~~-------------~~~~~~~v~~A~~~i~~g-~~~~~lp~~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSS 217 (303)
T PF08538_consen 154 LNFL--GE-------------REAYEELVALAKELIAEG-KGDEILPREFTPLVFYDTPITAYRFLSLASPGGDDDYFSS 217 (303)
T ss_dssp TTSH--HH----------------HHHHHHHHHHHHHCT--TT-GG----GGTTT-SS---HHHHHT-S-SSHHHHTHHH
T ss_pred hhcc--cc-------------hHHHHHHHHHHHHHHHcC-CCCceeeccccccccCCCcccHHHHHhccCCCCcccccCC
Confidence 0000 00 011222222111110000 000011110110000 222334444444444444444444
Q ss_pred HHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHH-HHHHHHCCC--------CcEEEeCCCCCCccccChH
Q 013006 376 IMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWG-LQVKRQVPE--------APYYEISPAGHCPHDEVPE 444 (451)
Q Consensus 376 ~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~-~~l~~~lp~--------~~~~~i~~~gH~~~~e~p~ 444 (451)
.+.. ......+.++++|+|++++++|..+|+..- +.+.+++.. ..-.+||||+|.+-.+..+
T Consensus 218 DL~d-------e~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~ 288 (303)
T PF08538_consen 218 DLSD-------ERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQA 288 (303)
T ss_dssp HHTT--------HHHHTGGG--S-EEEEEE--TT--------------------------------------------
T ss_pred CCCH-------HHHHHHhccCCCceEEEecCCCceecccccccccccccccccccccccccccccccccccccccccc
Confidence 3321 344556788999999999999999997543 223333322 1245899999998755433
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=99.24 E-value=5.2e-10 Score=98.92 Aligned_cols=229 Identities=15% Similarity=0.178 Sum_probs=120.4
Q ss_pred ceeeecCCeEEEEeecCCCC---CCCCcEEEecCCCCChhcHHHHHHhhc-CCceEEEEcCCCC-CCCCCCCCCCCCCCC
Q 013006 137 CFWEWKPKFNVHYEKAGCEN---VNSPPVLFLPGFGVGSFHYEKQLKDLG-KDYRAWAIDFLGQ-GMSLPDEDPTPRSKE 211 (451)
Q Consensus 137 ~~~~~~~g~~l~y~~~g~~~---~~~p~VlllHG~~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~-G~S~~~~~~~~~~~~ 211 (451)
..+...+|.+|+..+.-|.+ ...++||+.+||+....+|..++.+|+ .||+|+.||...| |.|+..-.
T Consensus 5 hvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~------- 77 (294)
T PF02273_consen 5 HVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDIN------- 77 (294)
T ss_dssp EEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B-----------------
T ss_pred ceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCChh-------
Confidence 45667889999999887753 234899999999999999999999995 5799999998876 77764322
Q ss_pred CCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh---CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEec
Q 013006 212 GDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV---IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLN 288 (451)
Q Consensus 212 ~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l---~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~ 288 (451)
.+++....+++..+++.+ ++.++-||.-|+.|-+|+..|++- .+.-+|..-
T Consensus 78 ------------------------eftms~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaV 131 (294)
T PF02273_consen 78 ------------------------EFTMSIGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAV 131 (294)
T ss_dssp ---------------------------HHHHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES
T ss_pred ------------------------hcchHHhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEe
Confidence 278988888888777665 678899999999999999999854 366666665
Q ss_pred cCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChh
Q 013006 289 ATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPA 368 (451)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (451)
+... +...+.+.... .++......-+... .......
T Consensus 132 GVVn------------------------lr~TLe~al~~------------Dyl~~~i~~lp~dl--------dfeGh~l 167 (294)
T PF02273_consen 132 GVVN------------------------LRDTLEKALGY------------DYLQLPIEQLPEDL--------DFEGHNL 167 (294)
T ss_dssp --S-------------------------HHHHHHHHHSS-------------GGGS-GGG--SEE--------EETTEEE
T ss_pred eeee------------------------HHHHHHHHhcc------------chhhcchhhCCCcc--------ccccccc
Confidence 4321 00111111000 00000000000000 0000000
Q ss_pred HHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC--CCcEEEeCCCCCCccccChH
Q 013006 369 AAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP--EAPYYEISPAGHCPHDEVPE 444 (451)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp--~~~~~~i~~~gH~~~~e~p~ 444 (451)
....|..--+ ..++.+.......++.+.+|++.+++++|.||......++..... ..+++.++|++|... |+|-
T Consensus 168 ~~~vFv~dc~-e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~-enl~ 243 (294)
T PF02273_consen 168 GAEVFVTDCF-EHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLG-ENLV 243 (294)
T ss_dssp EHHHHHHHHH-HTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TT-SSHH
T ss_pred chHHHHHHHH-HcCCccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchhh-hChH
Confidence 0111111110 112334456677788899999999999999999998888887654 467889999999864 4443
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=5.1e-10 Score=118.51 Aligned_cols=135 Identities=13% Similarity=0.039 Sum_probs=93.6
Q ss_pred CccceeeecCCeEEEE-eecCC---CCCCCCcEEEecCCCCChh--cHHHHHHhh-cCCceEEEEcCCCCCCCCCCCCCC
Q 013006 134 ITSCFWEWKPKFNVHY-EKAGC---ENVNSPPVLFLPGFGVGSF--HYEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPT 206 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y-~~~g~---~~~~~p~VlllHG~~~~~~--~~~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~ 206 (451)
....+++..||.+|.+ ....+ .+.+.|.||++||..+... .|......| .+||.|+.++.||-|.=...=.
T Consensus 416 ~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~-- 493 (686)
T PRK10115 416 SEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWY-- 493 (686)
T ss_pred EEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHH--
Confidence 4455566789999887 33322 1234699999999766653 354444444 7799999999999765431100
Q ss_pred CCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh--CCCCEEEEEeCcchHHHHHHHHhCCCccceE
Q 013006 207 PRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV--IREPVYVVGNSLGGFVAVYFAACNPHLVKGV 284 (451)
Q Consensus 207 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l--~~~~v~lvGhS~GG~val~~A~~~P~~v~~l 284 (451)
+...+.. ...+++|+++.+..+++.- ..+++.+.|.|.||+++..++.++|++++++
T Consensus 494 -----------~~g~~~~----------k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~ 552 (686)
T PRK10115 494 -----------EDGKFLK----------KKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGV 552 (686)
T ss_pred -----------Hhhhhhc----------CCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEE
Confidence 0000000 1157888888888777652 2368999999999999999999999999999
Q ss_pred EEeccCC
Q 013006 285 TLLNATP 291 (451)
Q Consensus 285 vl~~~~~ 291 (451)
|...+..
T Consensus 553 v~~vp~~ 559 (686)
T PRK10115 553 IAQVPFV 559 (686)
T ss_pred EecCCch
Confidence 9998753
|
|
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.7e-10 Score=102.14 Aligned_cols=231 Identities=19% Similarity=0.134 Sum_probs=137.1
Q ss_pred cceeeecCCeEEEEeecCCCC--CCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013006 136 SCFWEWKPKFNVHYEKAGCEN--VNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGD 213 (451)
Q Consensus 136 ~~~~~~~~g~~l~y~~~g~~~--~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~ 213 (451)
.-.++..+|.+|+-+..-|.. ...|.||-.||++++...|..++..-..+|.|+.+|.||+|.|.......+.+
T Consensus 58 dvTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~---- 133 (321)
T COG3458 58 DVTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDMLHWAVAGYAVFVMDVRGQGSSSQDTADPPGG---- 133 (321)
T ss_pred EEEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCCCccccccccccceeEEEEecccCCCccccCCCCCCC----
Confidence 344555577888776655532 24588999999999998998888777889999999999999985421111111
Q ss_pred chhhhhccccC-----CCCCCccccccccCHHHHHHHHHHHHHH------hCCCCEEEEEeCcchHHHHHHHHhCCCccc
Q 013006 214 STEEKNFLWGF-----GDKAQPWASELAYSVDLWQDQVCYFIKE------VIREPVYVVGNSLGGFVAVYFAACNPHLVK 282 (451)
Q Consensus 214 ~~~~~~~~w~~-----~~~~~~~~~~~~~s~~~~a~dv~~ll~~------l~~~~v~lvGhS~GG~val~~A~~~P~~v~ 282 (451)
+..=|| -|.... |-+.....|+..+++. ..-+++.+-|.|.||.+++..++..| +++
T Consensus 134 -----~s~pG~mtrGilD~kd~------yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik 201 (321)
T COG3458 134 -----PSDPGFMTRGILDRKDT------YYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIK 201 (321)
T ss_pred -----CcCCceeEeecccCCCc------eEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhh
Confidence 011111 110111 1122223333333333 34478999999999999999999887 799
Q ss_pred eEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHh
Q 013006 283 GVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILE 362 (451)
Q Consensus 283 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (451)
+++..-|.- .- +..+... ........ +..+++ .+.....+.++
T Consensus 202 ~~~~~~Pfl--~d------------f~r~i~~-~~~~~yde--------------i~~y~k----~h~~~e~~v~~---- 244 (321)
T COG3458 202 AVVADYPFL--SD------------FPRAIEL-ATEGPYDE--------------IQTYFK----RHDPKEAEVFE---- 244 (321)
T ss_pred ccccccccc--cc------------chhheee-cccCcHHH--------------HHHHHH----hcCchHHHHHH----
Confidence 998877631 00 0001000 00000111 111111 11111111111
Q ss_pred hccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC-CcEEEeCCCCCCcc
Q 013006 363 TTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE-APYYEISPAGHCPH 439 (451)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~-~~~~~i~~~gH~~~ 439 (451)
. +.+.+......++++|+|+..|--|+++||...-...+.++. .++.+++.-+|.-.
T Consensus 245 ------------T--------L~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe~~ 302 (321)
T COG3458 245 ------------T--------LSYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHEGG 302 (321)
T ss_pred ------------H--------HhhhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccCCceEEEeeccccccC
Confidence 1 112233344456899999999999999999999999999986 45667776667643
|
|
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.22 E-value=5.2e-10 Score=102.91 Aligned_cols=167 Identities=19% Similarity=0.138 Sum_probs=119.7
Q ss_pred CcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCC-CCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccccc
Q 013006 160 PPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQG-MSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAY 237 (451)
Q Consensus 160 p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G-~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 237 (451)
|.||++|+..+-....+...+.|+. ||.|+++|+-+.. .+...... ......+ .....
T Consensus 28 P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~-------------~~~~~~~-------~~~~~ 87 (236)
T COG0412 28 PGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDE-------------PAELETG-------LVERV 87 (236)
T ss_pred CEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCccccc-------------HHHHhhh-------hhccC
Confidence 8999999998888899999999965 8999999998743 33221100 0000000 00012
Q ss_pred CHHHHHHHHHHHHHHhC------CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCC
Q 013006 238 SVDLWQDQVCYFIKEVI------REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPW 311 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l~------~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (451)
+......|+.+.++.|. .++|.++|+||||.+++.++.+.| .|++.+..-+....
T Consensus 88 ~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~------------------ 148 (236)
T COG0412 88 DPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIA------------------ 148 (236)
T ss_pred CHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCC------------------
Confidence 34677778888877773 467999999999999999999988 78888888764210
Q ss_pred CCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhh
Q 013006 312 SGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALS 391 (451)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (451)
....
T Consensus 149 ----------------------------------------------------------------------------~~~~ 152 (236)
T COG0412 149 ----------------------------------------------------------------------------DDTA 152 (236)
T ss_pred ----------------------------------------------------------------------------Cccc
Confidence 0000
Q ss_pred hccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC----CCcEEEeCCCCCCcccc
Q 013006 392 RCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP----EAPYYEISPAGHCPHDE 441 (451)
Q Consensus 392 ~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp----~~~~~~i~~~gH~~~~e 441 (451)
...++++|+|+++|+.|+.+|......+.+.+. ..++.+++++.|.++-+
T Consensus 153 ~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~ 206 (236)
T COG0412 153 DAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFAND 206 (236)
T ss_pred ccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccC
Confidence 024579999999999999999987777766553 45688999999988755
|
|
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.20 E-value=3.7e-10 Score=107.85 Aligned_cols=253 Identities=13% Similarity=0.127 Sum_probs=142.3
Q ss_pred CCCcEEEecCCCCChhcHH-----HHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcc
Q 013006 158 NSPPVLFLPGFGVGSFHYE-----KQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPW 231 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~-----~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 231 (451)
-.+|+|++|-+-.....|+ .++..| .+|+.|+.+|+++-..+.. .|++++
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~-------------------~~~~ed----- 161 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA-------------------AKNLED----- 161 (445)
T ss_pred CCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhh-------------------hccHHH-----
Confidence 4689999999887776664 456665 5689999999998766542 122211
Q ss_pred ccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCc-cceEEEeccCCCCCCC---CCCCCchHHhh
Q 013006 232 ASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHL-VKGVTLLNATPFWGFS---PNPIRSPKLAR 307 (451)
Q Consensus 232 ~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~-v~~lvl~~~~~~~~~~---~~~~~~~~~~~ 307 (451)
|-.+.+.+.+..+.+..+.++|.++|+|.||+++..+++.++.+ |++++++.+...+... ........+..
T Consensus 162 -----Yi~e~l~~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~ 236 (445)
T COG3243 162 -----YILEGLSEAIDTVKDITGQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEA 236 (445)
T ss_pred -----HHHHHHHHHHHHHHHHhCccccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHH
Confidence 45556667777777778889999999999999999999999887 9999998875322110 00011111111
Q ss_pred hcCCCCCC-CChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHH-hhccChhH-HHHHH-HHHh---cC
Q 013006 308 ILPWSGTF-PLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRIL-ETTQHPAA-AASFA-SIMF---AP 380 (451)
Q Consensus 308 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~-~~~~---~~ 380 (451)
+..-.... .++.. .....+..+.....+..+.-..|........-....+. ....-+.. ...+. .++. ..
T Consensus 237 ~~~~i~~~g~lpg~---~ma~~F~mLrpndliw~~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~ 313 (445)
T COG3243 237 LDADIVQKGILPGW---YMAIVFFLLRPNDLIWNYFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENRLI 313 (445)
T ss_pred HHhhhhhccCCChH---HHHHHHHhcCccccchHHHHHHhcCCCCCCchhHHHhhCCCccCchHHHHHHHHHHHHhChhh
Confidence 11000000 11111 11111111222222222322223222222221111111 11111111 11111 1111 01
Q ss_pred CCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccC
Q 013006 381 QGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEV 442 (451)
Q Consensus 381 ~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~ 442 (451)
.+.+......-.+.+|+||++++.|++|.++|+.......+.+++-...+.-++||.-..-.
T Consensus 314 ~g~~~v~G~~VdL~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~~g~~~f~l~~sGHIa~vVN 375 (445)
T COG3243 314 RGGLEVSGTMVDLGDITCPVYNLAAEEDHIAPWSSVYLGARLLGGEVTFVLSRSGHIAGVVN 375 (445)
T ss_pred ccceEECCEEechhhcccceEEEeecccccCCHHHHHHHHHhcCCceEEEEecCceEEEEeC
Confidence 13333334444678999999999999999999999999999999833344447899865544
|
|
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.19 E-value=7.6e-10 Score=94.52 Aligned_cols=161 Identities=16% Similarity=0.130 Sum_probs=104.9
Q ss_pred CCCCcEEEecCCCCCh-----hcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCc
Q 013006 157 VNSPPVLFLPGFGVGS-----FHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQP 230 (451)
Q Consensus 157 ~~~p~VlllHG~~~~~-----~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 230 (451)
+..|..|++|--+... ..-..++..|. +||.++.+|+||.|+|...-+.- .
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~G-----------------i------ 82 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNG-----------------I------ 82 (210)
T ss_pred CCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCC-----------------c------
Confidence 3567788887653222 22344555564 48999999999999997543211 1
Q ss_pred cccccccCHHHHHHHHHHHHHHhCCCC-EEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhc
Q 013006 231 WASELAYSVDLWQDQVCYFIKEVIREP-VYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARIL 309 (451)
Q Consensus 231 ~~~~~~~s~~~~a~dv~~ll~~l~~~~-v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 309 (451)
--.+|....+.-+.......+ ..+.|+|+|+.|++.+|.+.|+ ....+.+.+.+.
T Consensus 83 ------GE~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~----------------- 138 (210)
T COG2945 83 ------GELEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPIN----------------- 138 (210)
T ss_pred ------chHHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCC-----------------
Confidence 133443333332222222233 4689999999999999999886 444444444210
Q ss_pred CCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHH
Q 013006 310 PWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREA 389 (451)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (451)
. ..
T Consensus 139 -------------------------------------------------------------------------~----~d 141 (210)
T COG2945 139 -------------------------------------------------------------------------A----YD 141 (210)
T ss_pred -------------------------------------------------------------------------c----hh
Confidence 0 00
Q ss_pred hhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccC
Q 013006 390 LSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEV 442 (451)
Q Consensus 390 ~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~ 442 (451)
...+....+|.++|+|+.|.+++++...++++. ...+++++++++||++-..
T Consensus 142 fs~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~-~~~~~i~i~~a~HFF~gKl 193 (210)
T COG2945 142 FSFLAPCPSPGLVIQGDADDVVDLVAVLKWQES-IKITVITIPGADHFFHGKL 193 (210)
T ss_pred hhhccCCCCCceeEecChhhhhcHHHHHHhhcC-CCCceEEecCCCceecccH
Confidence 011233578999999999999999988888887 4578899999999988543
|
|
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.3e-10 Score=131.35 Aligned_cols=100 Identities=19% Similarity=0.162 Sum_probs=87.8
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAY 237 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 237 (451)
++++++++||++++...|..+...|..+++|+++|.+|+|.+... .+
T Consensus 1067 ~~~~l~~lh~~~g~~~~~~~l~~~l~~~~~v~~~~~~g~~~~~~~---------------------------------~~ 1113 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAWQFSVLSRYLDPQWSIYGIQSPRPDGPMQT---------------------------------AT 1113 (1296)
T ss_pred CCCCeEEecCCCCchHHHHHHHHhcCCCCcEEEEECCCCCCCCCC---------------------------------CC
Confidence 357899999999999999999999998999999999999865311 17
Q ss_pred CHHHHHHHHHHHHHHhCC-CCEEEEEeCcchHHHHHHHHh---CCCccceEEEeccC
Q 013006 238 SVDLWQDQVCYFIKEVIR-EPVYVVGNSLGGFVAVYFAAC---NPHLVKGVTLLNAT 290 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l~~-~~v~lvGhS~GG~val~~A~~---~P~~v~~lvl~~~~ 290 (451)
+++++++++.+.++.+.. .+++++||||||.+|+++|.+ .++++..++++++.
T Consensus 1114 ~l~~la~~~~~~i~~~~~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1114 SLDEVCEAHLATLLEQQPHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred CHHHHHHHHHHHHHhhCCCCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecCC
Confidence 999999999999988764 589999999999999999986 57899999999874
|
|
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.3e-09 Score=95.97 Aligned_cols=84 Identities=26% Similarity=0.368 Sum_probs=64.8
Q ss_pred EEEecCCCCChhcHHH--HHHhhcC---CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccc
Q 013006 162 VLFLPGFGVGSFHYEK--QLKDLGK---DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELA 236 (451)
Q Consensus 162 VlllHG~~~~~~~~~~--~~~~L~~---~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 236 (451)
||++|||..+...... +.+.+++ ...++++|++
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~------------------------------------------ 39 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP------------------------------------------ 39 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC------------------------------------------
Confidence 8999999988876543 3344543 3566666654
Q ss_pred cCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 237 YSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 237 ~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
...+...+.+..+++....+.+.|||.||||+.|..+|.+++ +++ ||++|+
T Consensus 40 ~~p~~a~~~l~~~i~~~~~~~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPa 90 (187)
T PF05728_consen 40 PFPEEAIAQLEQLIEELKPENVVLIGSSLGGFYATYLAERYG--LPA-VLINPA 90 (187)
T ss_pred cCHHHHHHHHHHHHHhCCCCCeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCC
Confidence 356677788888999988878999999999999999999985 444 999986
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=3.9e-08 Score=99.42 Aligned_cols=127 Identities=20% Similarity=0.203 Sum_probs=87.1
Q ss_pred ccceeeecC---CeEEEEeecCCC--CCCCCcEEEecCCCCChhcHHHHHH-----------h-------hcCCceEEEE
Q 013006 135 TSCFWEWKP---KFNVHYEKAGCE--NVNSPPVLFLPGFGVGSFHYEKQLK-----------D-------LGKDYRAWAI 191 (451)
Q Consensus 135 ~~~~~~~~~---g~~l~y~~~g~~--~~~~p~VlllHG~~~~~~~~~~~~~-----------~-------L~~~~~Vi~~ 191 (451)
.+.++...+ +..++|..+... ..+.|.||.++|.++.+..+-.+.+ . +.+...|+.+
T Consensus 48 ~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~i 127 (462)
T PTZ00472 48 WSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYV 127 (462)
T ss_pred eeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEE
Confidence 355666643 677888766532 2356999999999988877533221 1 2234789999
Q ss_pred cCC-CCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh-------CCCCEEEEEe
Q 013006 192 DFL-GQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV-------IREPVYVVGN 263 (451)
Q Consensus 192 D~r-G~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l-------~~~~v~lvGh 263 (451)
|.| |+|.|....... ..+.++.++|+..+++.. ...+++|+||
T Consensus 128 DqP~G~G~S~~~~~~~-----------------------------~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~Ge 178 (462)
T PTZ00472 128 DQPAGVGFSYADKADY-----------------------------DHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGE 178 (462)
T ss_pred eCCCCcCcccCCCCCC-----------------------------CCChHHHHHHHHHHHHHHHHhCccccCCCEEEEee
Confidence 975 888886422110 145677888888888743 4578999999
Q ss_pred CcchHHHHHHHHhC----------CCccceEEEeccC
Q 013006 264 SLGGFVAVYFAACN----------PHLVKGVTLLNAT 290 (451)
Q Consensus 264 S~GG~val~~A~~~----------P~~v~~lvl~~~~ 290 (451)
|+||.++..+|.+. +=.++++++-++.
T Consensus 179 SygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~ 215 (462)
T PTZ00472 179 SYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGL 215 (462)
T ss_pred cchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccc
Confidence 99999998887752 1147888888874
|
|
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=99.06 E-value=3.8e-09 Score=99.92 Aligned_cols=117 Identities=19% Similarity=0.101 Sum_probs=75.5
Q ss_pred CCeEEEEeecCC--C-CCCCCcEEEecCCCCCh-hcHHHH--HH--------hhcCCceEEEEcCCCCCCCCCCCCCCCC
Q 013006 143 PKFNVHYEKAGC--E-NVNSPPVLFLPGFGVGS-FHYEKQ--LK--------DLGKDYRAWAIDFLGQGMSLPDEDPTPR 208 (451)
Q Consensus 143 ~g~~l~y~~~g~--~-~~~~p~VlllHG~~~~~-~~~~~~--~~--------~L~~~~~Vi~~D~rG~G~S~~~~~~~~~ 208 (451)
||++|....+-| . ..+-|+||..|+++... ...... .. ...+||.|+..|.||.|.|+..-.+
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~--- 77 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDP--- 77 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-T---
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCcccc---
Confidence 677787776665 2 23448888889998653 222111 11 3366899999999999999754322
Q ss_pred CCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh---CC--CCEEEEEeCcchHHHHHHHHhCCCccce
Q 013006 209 SKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV---IR--EPVYVVGNSLGGFVAVYFAACNPHLVKG 283 (451)
Q Consensus 209 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l---~~--~~v~lvGhS~GG~val~~A~~~P~~v~~ 283 (451)
....-++|..++|+-+ .. .+|.++|.|++|++++.+|+..|..+++
T Consensus 78 -----------------------------~~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkA 128 (272)
T PF02129_consen 78 -----------------------------MSPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKA 128 (272)
T ss_dssp -----------------------------TSHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEE
T ss_pred -----------------------------CChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceE
Confidence 1233344444444443 33 4799999999999999999988889999
Q ss_pred EEEeccCC
Q 013006 284 VTLLNATP 291 (451)
Q Consensus 284 lvl~~~~~ 291 (451)
++...+..
T Consensus 129 i~p~~~~~ 136 (272)
T PF02129_consen 129 IVPQSGWS 136 (272)
T ss_dssp EEEESE-S
T ss_pred EEecccCC
Confidence 99987753
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.4e-08 Score=91.55 Aligned_cols=112 Identities=21% Similarity=0.302 Sum_probs=72.2
Q ss_pred CCcEEEecCCCCChhcHHHH--HHhhcC--CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccc
Q 013006 159 SPPVLFLPGFGVGSFHYEKQ--LKDLGK--DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASE 234 (451)
Q Consensus 159 ~p~VlllHG~~~~~~~~~~~--~~~L~~--~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 234 (451)
.|.||++||.+.+...+... +..|++ +|-|+.++....... .++ |.+.......
T Consensus 16 ~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~-----------------~~c--w~w~~~~~~~--- 73 (220)
T PF10503_consen 16 VPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANP-----------------QGC--WNWFSDDQQR--- 73 (220)
T ss_pred CCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCC-----------------CCc--cccccccccc---
Confidence 58899999999998877553 344654 577888875422111 111 2111110000
Q ss_pred cccCHHHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCC
Q 013006 235 LAYSVDLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPF 292 (451)
Q Consensus 235 ~~~s~~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~ 292 (451)
..-+...+++-+..+.++..+ .+|++.|+|.||+++..++..+|+++.++.+++..++
T Consensus 74 g~~d~~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~ 133 (220)
T PF10503_consen 74 GGGDVAFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPY 133 (220)
T ss_pred CccchhhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccccc
Confidence 001233344445555566555 5799999999999999999999999999999988653
|
|
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=98.99 E-value=2.1e-09 Score=97.61 Aligned_cols=187 Identities=21% Similarity=0.188 Sum_probs=93.9
Q ss_pred CCCcEEEecCCCCChhcHHHHHHh----hcC-CceEEEEcCCCCCCCCCCCCCCCCCC----CCCchhhhhccccCCCCC
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKD----LGK-DYRAWAIDFLGQGMSLPDEDPTPRSK----EGDSTEEKNFLWGFGDKA 228 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~----L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~----~~~~~~~~~~~w~~~~~~ 228 (451)
.++.||+|||++.++..+..+... |.+ ++.++.+|-|---... ..-..... .....+.-+.||...+.
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~--~~~~~~~~~~~~~~~~~~~~~~W~~~~~~- 79 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPG--PGIEPFSSEAESAFGDPGPFYSWWDPDDD- 79 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---G--GG-SS---HHHHHHHHTT--EESS---S--
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCc--ccccccccccccccCCCCcceeeeecCCC-
Confidence 357899999999999999876654 455 7999999876422000 00000000 00001133445544332
Q ss_pred CccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhC--------CCccceEEEeccCCCCCCCCCCC
Q 013006 229 QPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACN--------PHLVKGVTLLNATPFWGFSPNPI 300 (451)
Q Consensus 229 ~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~--------P~~v~~lvl~~~~~~~~~~~~~~ 300 (451)
......+++..+.+.+++++.+. =.-|+|+|.||.+|..++... ...++-+|++++....
T Consensus 80 ----~~~~~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~------- 147 (212)
T PF03959_consen 80 ----DHEYEGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPP------- 147 (212)
T ss_dssp ----SGGG---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----E-------
T ss_pred ----cccccCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCC-------
Confidence 11124566777777777777653 345999999999999888642 1247888888874210
Q ss_pred CchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcC
Q 013006 301 RSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAP 380 (451)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (451)
.+.
T Consensus 148 ---------------------------------~~~-------------------------------------------- 150 (212)
T PF03959_consen 148 ---------------------------------DPD-------------------------------------------- 150 (212)
T ss_dssp ---------------------------------EE---------------------------------------------
T ss_pred ---------------------------------chh--------------------------------------------
Confidence 000
Q ss_pred CCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC-CcEEEeCCCCCCccccCh
Q 013006 381 QGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE-APYYEISPAGHCPHDEVP 443 (451)
Q Consensus 381 ~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~-~~~~~i~~~gH~~~~e~p 443 (451)
+.+.. .-.++++|+|-|+|++|.+++++..+.+.+.+.+ .+++..+ +||.+....+
T Consensus 151 -----~~~~~-~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~-gGH~vP~~~~ 207 (212)
T PF03959_consen 151 -----YQELY-DEPKISIPTLHVIGENDPVVPPERSEALAEMFDPDARVIEHD-GGHHVPRKKE 207 (212)
T ss_dssp -----GTTTT---TT---EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEES-SSSS----HH
T ss_pred -----hhhhh-ccccCCCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEEEC-CCCcCcCChh
Confidence 00000 1245799999999999999999999999998877 7888885 5898876543
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.99 E-value=2.6e-08 Score=84.24 Aligned_cols=119 Identities=18% Similarity=0.242 Sum_probs=86.6
Q ss_pred cCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCC
Q 013006 237 YSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFP 316 (451)
Q Consensus 237 ~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (451)
-..++|++.+.+-+... .++++||+||+|+.+++.++.+....|+|++|+++.-. .
T Consensus 41 P~~~dWi~~l~~~v~a~-~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~-~---------------------- 96 (181)
T COG3545 41 PVLDDWIARLEKEVNAA-EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDV-S---------------------- 96 (181)
T ss_pred CCHHHHHHHHHHHHhcc-CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCc-c----------------------
Confidence 48899999998888877 46799999999999999999987779999999998521 0
Q ss_pred ChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccCC
Q 013006 317 LPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMN 396 (451)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 396 (451)
.++...... . .++... ....
T Consensus 97 -----------------~~~~~~~~~-------------------~--------------------tf~~~p----~~~l 116 (181)
T COG3545 97 -----------------RPEIRPKHL-------------------M--------------------TFDPIP----REPL 116 (181)
T ss_pred -----------------ccccchhhc-------------------c--------------------ccCCCc----cccC
Confidence 000000000 0 000000 1234
Q ss_pred CCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccc
Q 013006 397 GVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHD 440 (451)
Q Consensus 397 ~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~ 440 (451)
.-|.+++..++|++++++.++.+++.+ ++.++.+..+||+.-.
T Consensus 117 pfps~vvaSrnDp~~~~~~a~~~a~~w-gs~lv~~g~~GHiN~~ 159 (181)
T COG3545 117 PFPSVVVASRNDPYVSYEHAEDLANAW-GSALVDVGEGGHINAE 159 (181)
T ss_pred CCceeEEEecCCCCCCHHHHHHHHHhc-cHhheecccccccchh
Confidence 669999999999999999999999998 4567777788998543
|
|
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=98.94 E-value=7e-09 Score=94.69 Aligned_cols=103 Identities=20% Similarity=0.311 Sum_probs=71.3
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhc---------CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCC
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLG---------KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKA 228 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~---------~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 228 (451)
++.||||+||.+++...|+.+...+. ..++++++|+......-....
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~------------------------ 58 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRT------------------------ 58 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCcccccccccc------------------------
Confidence 56899999999999988887765551 148899999876532211000
Q ss_pred CccccccccCHHHHHHHHHHHHHHh-----CCCCEEEEEeCcchHHHHHHHHhCC---CccceEEEeccC
Q 013006 229 QPWASELAYSVDLWQDQVCYFIKEV-----IREPVYVVGNSLGGFVAVYFAACNP---HLVKGVTLLNAT 290 (451)
Q Consensus 229 ~~~~~~~~~s~~~~a~dv~~ll~~l-----~~~~v~lvGhS~GG~val~~A~~~P---~~v~~lvl~~~~ 290 (451)
+....+.+.+.+..+++.+ +.++++||||||||.++..++...+ +.|+.+|.++++
T Consensus 59 ------l~~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tP 122 (225)
T PF07819_consen 59 ------LQRQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTP 122 (225)
T ss_pred ------HHHHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCC
Confidence 0012233444555555655 4578999999999999988876543 579999999975
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.93 E-value=8.1e-08 Score=85.30 Aligned_cols=257 Identities=20% Similarity=0.278 Sum_probs=142.8
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhc----CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLG----KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWAS 233 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~----~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 233 (451)
+++.|+.++|.++....|.++...|- +.+.||.+-..||-.-...-... .....
T Consensus 28 ~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~----------------------~s~~~ 85 (301)
T KOG3975|consen 28 DKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLRED----------------------HSHTN 85 (301)
T ss_pred CceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccc----------------------ccccc
Confidence 56889999999999999999888763 34679999988886543110000 00011
Q ss_pred ccccCHHHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhC--CCccceEEEeccCCC-CCCCCCCCCchHHhhh
Q 013006 234 ELAYSVDLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACN--PHLVKGVTLLNATPF-WGFSPNPIRSPKLARI 308 (451)
Q Consensus 234 ~~~~s~~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~--P~~v~~lvl~~~~~~-~~~~~~~~~~~~~~~~ 308 (451)
+-.++++++++.=.+|++..-. .+++++|||.|+++.+.+.... --.|.+++++-|+.- +.-.+++.. +...
T Consensus 86 ~eifsL~~QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~---~t~~ 162 (301)
T KOG3975|consen 86 EEIFSLQDQVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIR---LTKV 162 (301)
T ss_pred ccccchhhHHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceE---eeee
Confidence 1238999999999999987743 6899999999999999988743 236888888877521 111111111 1111
Q ss_pred cCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCc--h
Q 013006 309 LPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLS--F 386 (451)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 386 (451)
..|... ...+.... -....|..++.++.+.+........+.....+.. .++...+..... ....+. .
T Consensus 163 l~~~~h------v~~lt~yi-~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l-~h~~v~rn~v~l---a~qEm~eV~ 231 (301)
T KOG3975|consen 163 LRYLPH------VVSLTSYI-YWILLPGFIRFILIKFMLCGSNGPQEFLSTALFL-THPQVVRNSVGL---AAQEMEEVT 231 (301)
T ss_pred eeeehh------hhheeeee-eeecChHHHHHHHHHHhcccCCCcHHHHhhHHHh-hcHHHHHHHhhh---chHHHHHHH
Confidence 111100 00000000 0011233333333333333332222222111111 111111110000 000000 0
Q ss_pred hHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEE-eCCCCCCccccChHHHHhhh
Q 013006 387 REALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYE-ISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 387 ~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~-i~~~gH~~~~e~p~~v~~~I 450 (451)
....+-+.+..+-+-+.+|.+|.|+|.+....+++.+|...+.. .++..|.+-..+.+..+..+
T Consensus 232 ~~d~e~~een~d~l~Fyygt~DgW~p~~~~d~~kdd~~eed~~Ldedki~HAFV~~~~q~ma~~v 296 (301)
T KOG3975|consen 232 TRDIEYCEENLDSLWFYYGTNDGWVPSHYYDYYKDDVPEEDLKLDEDKIPHAFVVKHAQYMANAV 296 (301)
T ss_pred HhHHHHHHhcCcEEEEEccCCCCCcchHHHHHHhhhcchhceeeccccCCcceeecccHHHHHHH
Confidence 11122234456788899999999999999999999999754332 26788988888777766654
|
|
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.1e-08 Score=92.81 Aligned_cols=95 Identities=20% Similarity=0.297 Sum_probs=61.5
Q ss_pred EEEecCCCC---ChhcHHHHHHhhc--CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccc
Q 013006 162 VLFLPGFGV---GSFHYEKQLKDLG--KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELA 236 (451)
Q Consensus 162 VlllHG~~~---~~~~~~~~~~~L~--~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 236 (451)
||++||.+- +......+...|+ .++.|+.+|+|=.... +.+
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~-----~~p----------------------------- 46 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEA-----PFP----------------------------- 46 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTS-----STT-----------------------------
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccccc-----ccc-----------------------------
Confidence 799999753 3344455566654 4899999999943221 110
Q ss_pred cCHHHHHHHHHHHHHH-----hCCCCEEEEEeCcchHHHHHHHHhCCC----ccceEEEeccC
Q 013006 237 YSVDLWQDQVCYFIKE-----VIREPVYVVGNSLGGFVAVYFAACNPH----LVKGVTLLNAT 290 (451)
Q Consensus 237 ~s~~~~a~dv~~ll~~-----l~~~~v~lvGhS~GG~val~~A~~~P~----~v~~lvl~~~~ 290 (451)
-.++|..+.+..+++. .+.++++|+|+|-||.+++.++.+..+ .++++++++|.
T Consensus 47 ~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~ 109 (211)
T PF07859_consen 47 AALEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPW 109 (211)
T ss_dssp HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCH
T ss_pred ccccccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhhcccchhhhhccccc
Confidence 3455555555555655 345789999999999999999885433 48999999984
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.5e-07 Score=77.87 Aligned_cols=105 Identities=17% Similarity=0.194 Sum_probs=74.3
Q ss_pred CCcEEEecCCCCChh--cHHHHHHhhc-CCceEEEEcCCCCCCCCCC-CCCCCCCCCCCchhhhhccccCCCCCCccccc
Q 013006 159 SPPVLFLPGFGVGSF--HYEKQLKDLG-KDYRAWAIDFLGQGMSLPD-EDPTPRSKEGDSTEEKNFLWGFGDKAQPWASE 234 (451)
Q Consensus 159 ~p~VlllHG~~~~~~--~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~-~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 234 (451)
.-+||+-||.+.+.+ ........|+ +++.|..++++-.-...-. ..|.+.+.
T Consensus 14 ~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~------------------------ 69 (213)
T COG3571 14 PVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSG------------------------ 69 (213)
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccc------------------------
Confidence 347888899987654 4677778885 5799999998865332211 11111110
Q ss_pred cccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEecc
Q 013006 235 LAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNA 289 (451)
Q Consensus 235 ~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~ 289 (451)
--...+...+.++.+.+...+.++-|+||||-++-..|....-.|.++++++-
T Consensus 70 --t~~~~~~~~~aql~~~l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgY 122 (213)
T COG3571 70 --TLNPEYIVAIAQLRAGLAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGY 122 (213)
T ss_pred --cCCHHHHHHHHHHHhcccCCceeeccccccchHHHHHHHhhcCCcceEEEecC
Confidence 23356777777888888778999999999999998888765555999999974
|
|
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=98.86 E-value=9.5e-08 Score=90.45 Aligned_cols=238 Identities=16% Similarity=0.161 Sum_probs=124.6
Q ss_pred CCCcEEEecCCCCChhcHHH-H-HHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEK-Q-LKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASE 234 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~-~-~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 234 (451)
.+|.+|.++|.|...+..+. + +..| .+|+.-+.+..|-||...+...... .
T Consensus 91 ~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s--------------------------~ 144 (348)
T PF09752_consen 91 YRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRS--------------------------S 144 (348)
T ss_pred CCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcc--------------------------c
Confidence 57889999998875544433 3 3444 5689999999999998764432110 0
Q ss_pred cccCHHHH-------HH---HHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchH
Q 013006 235 LAYSVDLW-------QD---QVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPK 304 (451)
Q Consensus 235 ~~~s~~~~-------a~---dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~ 304 (451)
..++.|+ +. .+..++++.+..++.+.|.||||.+|...|+.+|..|..+-++++..--..+.. ..
T Consensus 145 -l~~VsDl~~~g~~~i~E~~~Ll~Wl~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~----Gv 219 (348)
T PF09752_consen 145 -LRNVSDLFVMGRATILESRALLHWLEREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTE----GV 219 (348)
T ss_pred -ccchhHHHHHHhHHHHHHHHHHHHHHhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhh----hh
Confidence 0122222 22 233344445788999999999999999999999988887777776421111111 11
Q ss_pred HhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCC
Q 013006 305 LARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNL 384 (451)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (451)
+.....|. .+...+ .+. ...+..... ...... ......-...............+.... ..
T Consensus 220 ls~~i~W~----------~L~~q~----~~~-~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~Ea~~~m~~~md~~T-~l 280 (348)
T PF09752_consen 220 LSNSINWD----------ALEKQF----EDT-VYEEEISDI-PAQNKS--LPLDSMEERRRDREALRFMRGVMDSFT-HL 280 (348)
T ss_pred hhcCCCHH----------HHHHHh----ccc-chhhhhccc-ccCccc--ccchhhccccchHHHHHHHHHHHHhhc-cc
Confidence 11111111 010000 000 000000000 000000 000000000000111111111110000 00
Q ss_pred chhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCC-ccccChHHHHhhh
Q 013006 385 SFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHC-PHDEVPEVCSLCL 450 (451)
Q Consensus 385 ~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~-~~~e~p~~v~~~I 450 (451)
.... ...-.-.+.++.+++|.+||......+.+..|++++.++++ ||. .++-+.+.|.++|
T Consensus 281 --~nf~--~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~WPGsEvR~l~g-GHVsA~L~~q~~fR~AI 342 (348)
T PF09752_consen 281 --TNFP--VPVDPSAIIFVAAKNDAYVPRHGVLSLQEIWPGSEVRYLPG-GHVSAYLLHQEAFRQAI 342 (348)
T ss_pred --cccC--CCCCCCcEEEEEecCceEechhhcchHHHhCCCCeEEEecC-CcEEEeeechHHHHHHH
Confidence 0000 01123457899999999999998899999999999999976 996 5566677777766
|
|
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=5.2e-08 Score=104.09 Aligned_cols=78 Identities=13% Similarity=-0.026 Sum_probs=58.5
Q ss_pred hcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhC-------
Q 013006 182 LGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI------- 254 (451)
Q Consensus 182 L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~------- 254 (451)
+.+||.|+..|.||.|.|+..... +. .+-.+|..++|+-+.
T Consensus 276 ~~rGYaVV~~D~RGtg~SeG~~~~-------------------------------~~-~~E~~D~~~vIeWl~~~~~~~~ 323 (767)
T PRK05371 276 LPRGFAVVYVSGIGTRGSDGCPTT-------------------------------GD-YQEIESMKAVIDWLNGRATAYT 323 (767)
T ss_pred HhCCeEEEEEcCCCCCCCCCcCcc-------------------------------CC-HHHHHHHHHHHHHHhhCCcccc
Confidence 366999999999999999753221 11 223344444444443
Q ss_pred -------------CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 255 -------------REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 255 -------------~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
-.+|.++|.|+||++++.+|...|..++++|..++..
T Consensus 324 d~~~~~~~kq~WsnGkVGm~G~SY~G~~~~~aAa~~pp~LkAIVp~a~is 373 (767)
T PRK05371 324 DRTRGKEVKADWSNGKVAMTGKSYLGTLPNAVATTGVEGLETIIPEAAIS 373 (767)
T ss_pred ccccccccccCCCCCeeEEEEEcHHHHHHHHHHhhCCCcceEEEeeCCCC
Confidence 3589999999999999999999999999999988754
|
|
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.85 E-value=5.7e-08 Score=88.95 Aligned_cols=102 Identities=25% Similarity=0.258 Sum_probs=71.2
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELA 236 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 236 (451)
.=|+|||+||+......|..++.+++. ||-|+++|+...+....... .
T Consensus 16 ~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~~-------------------------------~ 64 (259)
T PF12740_consen 16 TYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDDTDE-------------------------------V 64 (259)
T ss_pred CcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCcchh-------------------------------H
Confidence 358999999999888889999999976 79999999766433210000 0
Q ss_pred cCHHHHHHHHHH-HHHHh------CCCCEEEEEeCcchHHHHHHHHhC-----CCccceEEEeccC
Q 013006 237 YSVDLWQDQVCY-FIKEV------IREPVYVVGNSLGGFVAVYFAACN-----PHLVKGVTLLNAT 290 (451)
Q Consensus 237 ~s~~~~a~dv~~-ll~~l------~~~~v~lvGhS~GG~val~~A~~~-----P~~v~~lvl~~~~ 290 (451)
....++++.+.+ +-..+ +..++.|.|||-||-+|+.++..+ +.+++++++++|.
T Consensus 65 ~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPV 130 (259)
T PF12740_consen 65 ASAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPV 130 (259)
T ss_pred HHHHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccc
Confidence 112222222111 11111 346899999999999999999987 5689999999996
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.75 E-value=6.1e-07 Score=78.85 Aligned_cols=49 Identities=20% Similarity=0.261 Sum_probs=42.6
Q ss_pred cCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccCh
Q 013006 394 QMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVP 443 (451)
Q Consensus 394 ~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p 443 (451)
+.+++|.|-|.|+.|.+++...+..|++.++++.++..+ +||++.-..+
T Consensus 160 ~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a~vl~Hp-ggH~VP~~~~ 208 (230)
T KOG2551|consen 160 RPLSTPSLHIFGETDTIVPSERSEQLAESFKDATVLEHP-GGHIVPNKAK 208 (230)
T ss_pred cCCCCCeeEEecccceeecchHHHHHHHhcCCCeEEecC-CCccCCCchH
Confidence 457999999999999999999999999999999766665 6999876654
|
|
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.1e-07 Score=87.57 Aligned_cols=100 Identities=27% Similarity=0.269 Sum_probs=86.5
Q ss_pred CcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCH
Q 013006 160 PPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSV 239 (451)
Q Consensus 160 p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~ 239 (451)
|||+++|+.++....|..+...|.....|+..+.||.|.-.... .++
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~~~v~~l~a~g~~~~~~~~---------------------------------~~l 47 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPLLPVYGLQAPGYGAGEQPF---------------------------------ASL 47 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccCceeeccccCccccccccc---------------------------------CCH
Confidence 58999999999999999999999988999999999998643221 589
Q ss_pred HHHHHHHHHHHHHhCC-CCEEEEEeCcchHHHHHHHHhC---CCccceEEEeccCCC
Q 013006 240 DLWQDQVCYFIKEVIR-EPVYVVGNSLGGFVAVYFAACN---PHLVKGVTLLNATPF 292 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~~-~~v~lvGhS~GG~val~~A~~~---P~~v~~lvl~~~~~~ 292 (451)
+++++...+-|..+.. .+++|+|||+||.+|+..|.+. .+-|..++++++.+.
T Consensus 48 ~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 48 DDMAAAYVAAIRRVQPEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 9999998888887754 6999999999999999999863 457999999998753
|
|
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=98.70 E-value=9.6e-08 Score=82.73 Aligned_cols=96 Identities=20% Similarity=0.161 Sum_probs=73.1
Q ss_pred CcEEEecCCCCChhcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccC
Q 013006 160 PPVLFLPGFGVGSFHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYS 238 (451)
Q Consensus 160 p~VlllHG~~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s 238 (451)
..+||+-|=++-...=..+...|+ +|+.|+.+|-+-|=.+. .|
T Consensus 3 t~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~------------------------------------rt 46 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSE------------------------------------RT 46 (192)
T ss_pred EEEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhh------------------------------------CC
Confidence 357777886665433345667785 58999999987665553 46
Q ss_pred HHHHHHHHHHHHHHh----CCCCEEEEEeCcchHHHHHHHHhCC----CccceEEEeccCC
Q 013006 239 VDLWQDQVCYFIKEV----IREPVYVVGNSLGGFVAVYFAACNP----HLVKGVTLLNATP 291 (451)
Q Consensus 239 ~~~~a~dv~~ll~~l----~~~~v~lvGhS~GG~val~~A~~~P----~~v~~lvl~~~~~ 291 (451)
.++.+.|+..++++. +.++++|||+|+|+-+.-....+.| ++|+.++|+++..
T Consensus 47 P~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 47 PEQTAADLARIIRHYRARWGRKRVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPST 107 (192)
T ss_pred HHHHHHHHHHHHHHHHHHhCCceEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccCC
Confidence 777777777777665 6789999999999988888887776 4799999999864
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.66 E-value=2e-07 Score=80.42 Aligned_cols=192 Identities=14% Similarity=0.071 Sum_probs=114.0
Q ss_pred EEEEeecCCCCCCCCcEEEecCCC---CC-hhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhcc
Q 013006 146 NVHYEKAGCENVNSPPVLFLPGFG---VG-SFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFL 221 (451)
Q Consensus 146 ~l~y~~~g~~~~~~p~VlllHG~~---~~-~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~ 221 (451)
+-....||+.+ ..+..+|+||.- ++ .......-..+.++|+|..++ ++.+.....
T Consensus 55 ~q~VDIwg~~~-~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvg---Y~l~~q~ht----------------- 113 (270)
T KOG4627|consen 55 RQLVDIWGSTN-QAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVG---YNLCPQVHT----------------- 113 (270)
T ss_pred ceEEEEecCCC-CccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEec---cCcCccccc-----------------
Confidence 33445566643 568999999952 22 222233334556789998875 455532110
Q ss_pred ccCCCCCCccccccccCHHHHHHHHHHHHHHhCC-CCEEEEEeCcchHHHHHHHHh-CCCccceEEEeccCCCCCCCCCC
Q 013006 222 WGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR-EPVYVVGNSLGGFVAVYFAAC-NPHLVKGVTLLNATPFWGFSPNP 299 (451)
Q Consensus 222 w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~-~~v~lvGhS~GG~val~~A~~-~P~~v~~lvl~~~~~~~~~~~~~ 299 (451)
+..++.+...-+.-+++...- +.+.+-|||.|+.+|+.+..+ +..+|.++++.++.-
T Consensus 114 -------------L~qt~~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY-------- 172 (270)
T KOG4627|consen 114 -------------LEQTMTQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVY-------- 172 (270)
T ss_pred -------------HHHHHHHHHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHh--------
Confidence 012444444445555555543 557778999999999887765 444899999888641
Q ss_pred CCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhc
Q 013006 300 IRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFA 379 (451)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (451)
.++.+.. .-+...-....+.
T Consensus 173 --------------------~l~EL~~-----------------te~g~dlgLt~~~----------------------- 192 (270)
T KOG4627|consen 173 --------------------DLRELSN-----------------TESGNDLGLTERN----------------------- 192 (270)
T ss_pred --------------------hHHHHhC-----------------CccccccCcccch-----------------------
Confidence 0111100 0000000000000
Q ss_pred CCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccC
Q 013006 380 PQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEV 442 (451)
Q Consensus 380 ~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~ 442 (451)
.......+..+..+++|+|++.|++|.---.+..+.++.++..+.+..+++.+|+-.++.
T Consensus 193 ---ae~~Scdl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~a~~~~f~n~~hy~I~~~ 252 (270)
T KOG4627|consen 193 ---AESVSCDLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLRKASFTLFKNYDHYDIIEE 252 (270)
T ss_pred ---hhhcCccHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhhhcceeecCCcchhhHHHH
Confidence 000112233456789999999999997666678888899888899999999999866653
|
|
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=98.65 E-value=3.7e-06 Score=82.80 Aligned_cols=98 Identities=23% Similarity=0.397 Sum_probs=69.5
Q ss_pred CCCCcEEEe-----cCCCCChhcHHHH-HHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCc
Q 013006 157 VNSPPVLFL-----PGFGVGSFHYEKQ-LKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQP 230 (451)
Q Consensus 157 ~~~p~Vlll-----HG~~~~~~~~~~~-~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 230 (451)
+.++|+|.+ ||-|-..+.-+.. --.|..|+.|+.+.+.= . +.+
T Consensus 66 ~~krP~vViDPRAGHGpGIGGFK~dSevG~AL~~GHPvYFV~F~p----~--P~p------------------------- 114 (581)
T PF11339_consen 66 PTKRPFVVIDPRAGHGPGIGGFKPDSEVGVALRAGHPVYFVGFFP----E--PEP------------------------- 114 (581)
T ss_pred CCCCCeEEeCCCCCCCCCccCCCcccHHHHHHHcCCCeEEEEecC----C--CCC-------------------------
Confidence 345666666 5544333333433 35577788888877641 1 111
Q ss_pred cccccccCHHHHHHHHHHHHHHhC-----CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 231 WASELAYSVDLWQDQVCYFIKEVI-----REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 231 ~~~~~~~s~~~~a~dv~~ll~~l~-----~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
..|+++.+.....|++++. ..+.+|||.+.||..++.+|+.+|+++.-+|+-+++
T Consensus 115 -----gQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaP 174 (581)
T PF11339_consen 115 -----GQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAP 174 (581)
T ss_pred -----CCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceeecCCC
Confidence 1588988888888887762 248999999999999999999999999888887764
|
Their function is unknown. |
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.8e-07 Score=92.08 Aligned_cols=132 Identities=17% Similarity=0.136 Sum_probs=60.3
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhc-CCceEEEEcCCCCCCCC-CC-CCCCCCCCCCCchhhhhcccc-CCCCCC-ccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLG-KDYRAWAIDFLGQGMSL-PD-EDPTPRSKEGDSTEEKNFLWG-FGDKAQ-PWA 232 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~-~~-~~~~~~~~~~~~~~~~~~~w~-~~~~~~-~~~ 232 (451)
+-|+|||.||++++...|..+...|+ .||-|+++|.|..-.+. .. .+...........+..+..|- +.+... ...
T Consensus 99 ~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (379)
T PF03403_consen 99 KFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEEF 178 (379)
T ss_dssp -EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGHH
T ss_pred CCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhHH
Confidence 35899999999999999999999995 57999999999542221 00 000000000000000000010 110000 000
Q ss_pred cccccCHHHHHHHHHHHHHHh--------------------------CCCCEEEEEeCcchHHHHHHHHhCCCccceEEE
Q 013006 233 SELAYSVDLWQDQVCYFIKEV--------------------------IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTL 286 (451)
Q Consensus 233 ~~~~~s~~~~a~dv~~ll~~l--------------------------~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl 286 (451)
+.....++.-++++..+++.+ +.+++.++|||+||.+++..+.+. .++++.|+
T Consensus 179 ~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~ 257 (379)
T PF03403_consen 179 ELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGIL 257 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEEE
Confidence 000011222223333333222 234699999999999999888876 58999999
Q ss_pred eccC
Q 013006 287 LNAT 290 (451)
Q Consensus 287 ~~~~ 290 (451)
+++.
T Consensus 258 LD~W 261 (379)
T PF03403_consen 258 LDPW 261 (379)
T ss_dssp ES--
T ss_pred eCCc
Confidence 9973
|
|
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.2e-07 Score=94.52 Aligned_cols=92 Identities=15% Similarity=0.205 Sum_probs=69.6
Q ss_pred CChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHH
Q 013006 170 VGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYF 249 (451)
Q Consensus 170 ~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~l 249 (451)
.....|..+++.|.+...+...|++|+|.+-+.... ....++++.+.+.++
T Consensus 105 ~~~~~~~~li~~L~~~GY~~~~dL~g~gYDwR~~~~-----------------------------~~~~~~~Lk~lIe~~ 155 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYKEGKTLFGFGYDFRQSNR-----------------------------LPETMDGLKKKLETV 155 (440)
T ss_pred chHHHHHHHHHHHHHcCCccCCCcccCCCCcccccc-----------------------------HHHHHHHHHHHHHHH
Confidence 456889999999976444558999999998653210 012345566666666
Q ss_pred HHHhCCCCEEEEEeCcchHHHHHHHHhCCC----ccceEEEeccC
Q 013006 250 IKEVIREPVYVVGNSLGGFVAVYFAACNPH----LVKGVTLLNAT 290 (451)
Q Consensus 250 l~~l~~~~v~lvGhS~GG~val~~A~~~P~----~v~~lvl~~~~ 290 (451)
.++.+.++++||||||||.+++.++..+|+ .|+++|.++++
T Consensus 156 ~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~P 200 (440)
T PLN02733 156 YKASGGKKVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAAP 200 (440)
T ss_pred HHHcCCCCEEEEEECHhHHHHHHHHHHCCHhHHhHhccEEEECCC
Confidence 666778999999999999999999999886 47899999763
|
|
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=98.60 E-value=2.7e-06 Score=81.64 Aligned_cols=120 Identities=20% Similarity=0.218 Sum_probs=82.8
Q ss_pred ceeeecCCeEEEEeecCCC--C--CCCCcEEEecCCCC-----ChhcHHHHHHhhcC--CceEEEEcCCCCCCCCCCCCC
Q 013006 137 CFWEWKPKFNVHYEKAGCE--N--VNSPPVLFLPGFGV-----GSFHYEKQLKDLGK--DYRAWAIDFLGQGMSLPDEDP 205 (451)
Q Consensus 137 ~~~~~~~g~~l~y~~~g~~--~--~~~p~VlllHG~~~-----~~~~~~~~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~ 205 (451)
..++..+...+..+.+-|. . ...|.|||+||.|. ....|+.+...++. +.-|+.+|+|= .|+.+
T Consensus 64 ~dv~~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRL-----APEh~ 138 (336)
T KOG1515|consen 64 KDVTIDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRL-----APEHP 138 (336)
T ss_pred eeeEecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCccc-----CCCCC
Confidence 3334444444444444432 1 35689999999763 24568888888854 68889999983 33444
Q ss_pred CCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHH------hCCCCEEEEEeCcchHHHHHHHHhC--
Q 013006 206 TPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKE------VIREPVYVVGNSLGGFVAVYFAACN-- 277 (451)
Q Consensus 206 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~------l~~~~v~lvGhS~GG~val~~A~~~-- 277 (451)
.| ..++|-.+.+..++++ .+.+++.|+|=|-||.+|..+|.+.
T Consensus 139 ~P-----------------------------a~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~ 189 (336)
T KOG1515|consen 139 FP-----------------------------AAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAAD 189 (336)
T ss_pred CC-----------------------------ccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhh
Confidence 33 4667777777777765 2457899999999999999888752
Q ss_pred ----CCccceEEEeccC
Q 013006 278 ----PHLVKGVTLLNAT 290 (451)
Q Consensus 278 ----P~~v~~lvl~~~~ 290 (451)
+-++++.|++-|.
T Consensus 190 ~~~~~~ki~g~ili~P~ 206 (336)
T KOG1515|consen 190 EKLSKPKIKGQILIYPF 206 (336)
T ss_pred ccCCCcceEEEEEEecc
Confidence 3579999999985
|
|
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.60 E-value=3.7e-06 Score=81.19 Aligned_cols=100 Identities=19% Similarity=0.219 Sum_probs=69.8
Q ss_pred CCCcEEEecCCC---CChhcHHHHHHhh--cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccc
Q 013006 158 NSPPVLFLPGFG---VGSFHYEKQLKDL--GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWA 232 (451)
Q Consensus 158 ~~p~VlllHG~~---~~~~~~~~~~~~L--~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 232 (451)
..|+||++||.+ ++....+.++..+ ..++.|+.+|+|=.-+- +.+
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~-----~~p------------------------- 127 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEH-----PFP------------------------- 127 (312)
T ss_pred CCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCC-----CCC-------------------------
Confidence 479999999975 3344444555554 45899999999854332 111
Q ss_pred cccccCHHHHHHHHHHHHHH---hC--CCCEEEEEeCcchHHHHHHHHhCCC----ccceEEEeccCC
Q 013006 233 SELAYSVDLWQDQVCYFIKE---VI--REPVYVVGNSLGGFVAVYFAACNPH----LVKGVTLLNATP 291 (451)
Q Consensus 233 ~~~~~s~~~~a~dv~~ll~~---l~--~~~v~lvGhS~GG~val~~A~~~P~----~v~~lvl~~~~~ 291 (451)
..+++..+.+..+.++ ++ .+++.++|+|-||.+++.++..-.+ ...+.+++.|..
T Consensus 128 ----~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~ 191 (312)
T COG0657 128 ----AALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLL 191 (312)
T ss_pred ----chHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEeccc
Confidence 3566655556555554 33 4789999999999999998876443 578888988853
|
|
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.1e-06 Score=81.26 Aligned_cols=118 Identities=15% Similarity=0.264 Sum_probs=68.8
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhc-C-C--ceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhh--ccccCCCCCCcc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLG-K-D--YRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKN--FLWGFGDKAQPW 231 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~-~-~--~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~--~~w~~~~~~~~~ 231 (451)
...|.||+||++++...+..++..+. + + ..++.++---.|.-.-...... ...+ ..-.|++...
T Consensus 10 ~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~--------~~~nPiIqV~F~~n~~-- 79 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSK--------NAKNPIIQVNFEDNRN-- 79 (255)
T ss_dssp S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---T--------T-SS-EEEEEESSTT---
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCC--------CCCCCEEEEEecCCCc--
Confidence 35689999999999999999999996 4 2 4454443322222110000000 0000 1122222110
Q ss_pred ccccccCHHHHHHHHHHHHHHh----CCCCEEEEEeCcchHHHHHHHHhCCC-----ccceEEEeccC
Q 013006 232 ASELAYSVDLWQDQVCYFIKEV----IREPVYVVGNSLGGFVAVYFAACNPH-----LVKGVTLLNAT 290 (451)
Q Consensus 232 ~~~~~~s~~~~a~dv~~ll~~l----~~~~v~lvGhS~GG~val~~A~~~P~-----~v~~lvl~~~~ 290 (451)
-+....+..+..++..| +++++.+|||||||..++.++..+.. .+.++|.++++
T Consensus 80 -----~~~~~qa~wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~p 142 (255)
T PF06028_consen 80 -----ANYKKQAKWLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGP 142 (255)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--
T ss_pred -----CCHHHHHHHHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccc
Confidence 25666777777777665 67899999999999999999887532 58999999973
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.5e-07 Score=89.48 Aligned_cols=221 Identities=18% Similarity=0.150 Sum_probs=118.6
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCC--CCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLG--QGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASE 234 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG--~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 234 (451)
.-|.|||.||.+.....+..+.+.|+. +|-|.++|.+| .|........... -....+|+-
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~-------~~p~~~~er---------- 132 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGS-------YAPAEWWER---------- 132 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcc-------cchhhhhcc----------
Confidence 458899999999999999999999966 79999999999 3443322111000 011123322
Q ss_pred cccCHHHHHHHHHHH------HHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhh
Q 013006 235 LAYSVDLWQDQVCYF------IKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARI 308 (451)
Q Consensus 235 ~~~s~~~~a~dv~~l------l~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 308 (451)
..++..+.+.+.+. -.++...+|.++|||+||..++.++..+.+......-|.... ......+....+....
T Consensus 133 -p~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~-~~~~~~~~~~~~~l~q 210 (365)
T COG4188 133 -PLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESAS-RICLDPPGLNGRLLNQ 210 (365)
T ss_pred -cccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhh-hcccCCCCcChhhhcc
Confidence 13444444444433 122345689999999999999999887655322222222100 0000000000000000
Q ss_pred cCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhH
Q 013006 309 LPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFRE 388 (451)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (451)
. ....++ .. ....+++.....+. ..+.....+.
T Consensus 211 ~---~av~~~------------------------~~----------------~~~~rDpriravvA---~~p~~~~~Fg- 243 (365)
T COG4188 211 C---AAVWLP------------------------RQ----------------AYDLRDPRIRAVVA---INPALGMIFG- 243 (365)
T ss_pred c---cccccc------------------------hh----------------hhccccccceeeee---ccCCcccccc-
Confidence 0 000000 00 00000000000000 0000011111
Q ss_pred HhhhccCCCCCEEEEeeCCCCCCChH-HHHHHHHHCCCC--cEEEeCCCCCCccccChHH
Q 013006 389 ALSRCQMNGVPICLIYGKEDPWVKPV-WGLQVKRQVPEA--PYYEISPAGHCPHDEVPEV 445 (451)
Q Consensus 389 ~~~~l~~i~~PvLii~G~~D~~v~~~-~~~~l~~~lp~~--~~~~i~~~gH~~~~e~p~~ 445 (451)
...+.++++|++++.|..|...|+. ........+++. -+.+++++.|+-++|-+++
T Consensus 244 -~tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~ 302 (365)
T COG4188 244 -TTGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKE 302 (365)
T ss_pred -cccceeeecceeeecccccccCCcccccccccccCCcchhheeecCCCccccccccCcc
Confidence 3446788999999999999987765 334566677876 5778999999999887766
|
|
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.57 E-value=9.4e-07 Score=80.61 Aligned_cols=132 Identities=20% Similarity=0.182 Sum_probs=78.9
Q ss_pred cceeeecCCeEEEEeecCCC----CCCC-CcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCC-CCCCCCCCCCCC
Q 013006 136 SCFWEWKPKFNVHYEKAGCE----NVNS-PPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQG-MSLPDEDPTPRS 209 (451)
Q Consensus 136 ~~~~~~~~g~~l~y~~~g~~----~~~~-p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G-~S~~~~~~~~~~ 209 (451)
..+|..+-|.+|.|+.+-|. +++- |.|||+||.+.....-+.. |..+.--++.+.+-.+ .--. +..
T Consensus 163 ~~f~d~~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~---l~sg~gaiawa~pedqcfVlA-PQy---- 234 (387)
T COG4099 163 VEFYDESTGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKV---LSSGIGAIAWAGPEDQCFVLA-PQY---- 234 (387)
T ss_pred eEeeccccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhh---hhcCccceeeecccCceEEEc-ccc----
Confidence 45666788999999988873 2334 8999999998776554332 2233333444444333 0000 000
Q ss_pred CCCCchhhhhccccCCCCCCccccccccCHHHHHHHHH-HHHHHhCC--CCEEEEEeCcchHHHHHHHHhCCCccceEEE
Q 013006 210 KEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVC-YFIKEVIR--EPVYVVGNSLGGFVAVYFAACNPHLVKGVTL 286 (451)
Q Consensus 210 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~-~ll~~l~~--~~v~lvGhS~GG~val~~A~~~P~~v~~lvl 286 (451)
+..|-.++..+ ..-....++.+. .+.++.++ .+++++|.|+||+-++.++.++|+.+++.++
T Consensus 235 --------~~if~d~e~~t-------~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~ 299 (387)
T COG4099 235 --------NPIFADSEEKT-------LLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVP 299 (387)
T ss_pred --------ccccccccccc-------chhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeee
Confidence 00000000000 012233334444 33445555 5799999999999999999999999999999
Q ss_pred eccC
Q 013006 287 LNAT 290 (451)
Q Consensus 287 ~~~~ 290 (451)
+++.
T Consensus 300 iaG~ 303 (387)
T COG4099 300 IAGG 303 (387)
T ss_pred ecCC
Confidence 9974
|
|
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.56 E-value=9.1e-07 Score=94.43 Aligned_cols=206 Identities=14% Similarity=0.029 Sum_probs=128.8
Q ss_pred CCeEEEEeecCCCC----CCCCcEEEecCCCCChh-------cHHHHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCC
Q 013006 143 PKFNVHYEKAGCEN----VNSPPVLFLPGFGVGSF-------HYEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSK 210 (451)
Q Consensus 143 ~g~~l~y~~~g~~~----~~~p~VlllHG~~~~~~-------~~~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~ 210 (451)
+|...+|...-|++ ++=|.||.+||.+++.. .|..+ .. ..++-|+.+|.||-|.....-..
T Consensus 506 ~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~~~G~~~~~----- 578 (755)
T KOG2100|consen 506 DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSGGYGWDFRS----- 578 (755)
T ss_pred ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcCCcchhHHH-----
Confidence 78899888877642 22367777899886322 24333 22 45799999999998876432110
Q ss_pred CCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhCCCccceE-EEe
Q 013006 211 EGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACNPHLVKGV-TLL 287 (451)
Q Consensus 211 ~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~P~~v~~l-vl~ 287 (451)
.-...| ....++|+...++.+++..-+ +++.|.|+|.||++++.++...|+.+.+. +.+
T Consensus 579 ------~~~~~l------------G~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvav 640 (755)
T KOG2100|consen 579 ------ALPRNL------------GDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAV 640 (755)
T ss_pred ------Hhhhhc------------CCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEe
Confidence 111112 226788888888888887643 67999999999999999999998555544 999
Q ss_pred ccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccCh
Q 013006 288 NATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHP 367 (451)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (451)
+|...|. ........ ++ +......... + .+
T Consensus 641 aPVtd~~-~yds~~te------------------------------------ry----mg~p~~~~~~-y---~e----- 670 (755)
T KOG2100|consen 641 APVTDWL-YYDSTYTE------------------------------------RY----MGLPSENDKG-Y---EE----- 670 (755)
T ss_pred cceeeee-eecccccH------------------------------------hh----cCCCccccch-h---hh-----
Confidence 9875433 11100000 00 0000000000 0 00
Q ss_pred hHHHHHHHHHhcCCCCCchhHHhhhccCCCCCE-EEEeeCCCCCCChHHHHHHHHHCCC----CcEEEeCCCCCCccccC
Q 013006 368 AAAASFASIMFAPQGNLSFREALSRCQMNGVPI-CLIYGKEDPWVKPVWGLQVKRQVPE----APYYEISPAGHCPHDEV 442 (451)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv-Lii~G~~D~~v~~~~~~~l~~~lp~----~~~~~i~~~gH~~~~e~ 442 (451)
......+..++.|. |+|||+.|..|+.+.+.++.+.+.. .++.++|+..|.+-.-.
T Consensus 671 -------------------~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~ 731 (755)
T KOG2100|consen 671 -------------------SSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVE 731 (755)
T ss_pred -------------------ccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCccccccc
Confidence 11122233455555 9999999999999988887766532 57889999999876533
|
|
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=98.55 E-value=2.9e-07 Score=88.09 Aligned_cols=137 Identities=21% Similarity=0.101 Sum_probs=67.2
Q ss_pred ecCCeEEEEeecCCCC--CCCCcEEEecCCCCChhcH------------------HHHHHhhcC-CceEEEEcCCCCCCC
Q 013006 141 WKPKFNVHYEKAGCEN--VNSPPVLFLPGFGVGSFHY------------------EKQLKDLGK-DYRAWAIDFLGQGMS 199 (451)
Q Consensus 141 ~~~g~~l~y~~~g~~~--~~~p~VlllHG~~~~~~~~------------------~~~~~~L~~-~~~Vi~~D~rG~G~S 199 (451)
..++.++.....-|++ ...|.||++||-+++.+.. ......|++ ||-|+++|.+|+|..
T Consensus 95 ~~p~~~vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER 174 (390)
T PF12715_consen 95 TTPGSRVPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGER 174 (390)
T ss_dssp -STTB-EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG
T ss_pred ccCCeeEEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEcccccccc
Confidence 3455555555443332 3458899999987665331 113455654 799999999999997
Q ss_pred CCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHH-HHHHHHHHHHh------CCCCEEEEEeCcchHHHHH
Q 013006 200 LPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLW-QDQVCYFIKEV------IREPVYVVGNSLGGFVAVY 272 (451)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~-a~dv~~ll~~l------~~~~v~lvGhS~GG~val~ 272 (451)
........... .++..+ ..+...+..|+..+ +-|....++.| ..++|.++|+||||..++.
T Consensus 175 ~~~e~~~~~~~------~~~~~l------a~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~ 242 (390)
T PF12715_consen 175 GDMEGAAQGSN------YDCQAL------ARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWW 242 (390)
T ss_dssp -SSCCCTTTTS--------HHHH------HHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHH
T ss_pred ccccccccccc------hhHHHH------HHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHH
Confidence 65432211000 000000 00000111122111 11222344444 3468999999999999999
Q ss_pred HHHhCCCccceEEEeccC
Q 013006 273 FAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 273 ~A~~~P~~v~~lvl~~~~ 290 (451)
+|+..+ +|++.|..+..
T Consensus 243 LaALDd-RIka~v~~~~l 259 (390)
T PF12715_consen 243 LAALDD-RIKATVANGYL 259 (390)
T ss_dssp HHHH-T-T--EEEEES-B
T ss_pred HHHcch-hhHhHhhhhhh
Confidence 999874 89888887653
|
|
| >KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.52 E-value=5.1e-07 Score=83.80 Aligned_cols=99 Identities=20% Similarity=0.129 Sum_probs=68.2
Q ss_pred CcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCH
Q 013006 160 PPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSV 239 (451)
Q Consensus 160 p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~ 239 (451)
..|++.-|..+-.+. --....+.-+|.|+.+++||++.|...+.+. .+.
T Consensus 244 ~LvIC~EGNAGFYEv-G~m~tP~~lgYsvLGwNhPGFagSTG~P~p~------------------------------n~~ 292 (517)
T KOG1553|consen 244 DLVICFEGNAGFYEV-GVMNTPAQLGYSVLGWNHPGFAGSTGLPYPV------------------------------NTL 292 (517)
T ss_pred eEEEEecCCccceEe-eeecChHHhCceeeccCCCCccccCCCCCcc------------------------------cch
Confidence 356666775543221 0112234558999999999999998665442 233
Q ss_pred HHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 240 DLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
..+-.-+...|+.|+. +.++|.|+|.||+.++.+|..||+ |+++||-++.
T Consensus 293 nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtF 344 (517)
T KOG1553|consen 293 NAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATF 344 (517)
T ss_pred HHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecch
Confidence 3333333344666764 679999999999999999999996 9999998763
|
|
| >KOG2112 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.52 E-value=9.6e-07 Score=77.11 Aligned_cols=117 Identities=19% Similarity=0.200 Sum_probs=74.9
Q ss_pred CcEEEecCCCCChhcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccC
Q 013006 160 PPVLFLPGFGVGSFHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYS 238 (451)
Q Consensus 160 p~VlllHG~~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s 238 (451)
.+||++||++.+...|..++..|. ++..-|++..|-.-.+.-...... .-.+..++..+. .+-.-.
T Consensus 4 atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~---------aWfd~~~~~~~~----~~d~~~ 70 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMN---------AWFDIMELSSDA----PEDEEG 70 (206)
T ss_pred EEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCccc---------ceecceeeCccc----chhhhH
Confidence 589999999999999998888874 467778876553322211000000 000000111110 011235
Q ss_pred HHHHHHHHHHHHHHh---CC--CCEEEEEeCcchHHHHHHHHhCCCccceEEEecc
Q 013006 239 VDLWQDQVCYFIKEV---IR--EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNA 289 (451)
Q Consensus 239 ~~~~a~dv~~ll~~l---~~--~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~ 289 (451)
+...++.+..++++. ++ .++.+-|.|+||+++++.+..+|..+.+++-..+
T Consensus 71 ~~~aa~~i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~ 126 (206)
T KOG2112|consen 71 LHRAADNIANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSG 126 (206)
T ss_pred HHHHHHHHHHHHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeecccc
Confidence 566667777777664 33 5789999999999999999999888888877765
|
|
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=98.49 E-value=2.9e-07 Score=83.04 Aligned_cols=90 Identities=20% Similarity=0.247 Sum_probs=53.7
Q ss_pred CcEEEecCCCC-ChhcHHHHHHhh-cCCce---EEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccc
Q 013006 160 PPVLFLPGFGV-GSFHYEKQLKDL-GKDYR---AWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASE 234 (451)
Q Consensus 160 p~VlllHG~~~-~~~~~~~~~~~L-~~~~~---Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 234 (451)
.||||+||.++ ....|..+.+.| ++||. |+++++-.......... ...
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~---------------------------~~~ 54 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQN---------------------------AHM 54 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHH---------------------------HHB
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccc---------------------------ccc
Confidence 48999999998 668899999998 55788 89999844433211000 000
Q ss_pred cccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhC
Q 013006 235 LAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACN 277 (451)
Q Consensus 235 ~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~ 277 (451)
..-+..++.+.|..++++.+. +|.||||||||+++-.+....
T Consensus 55 ~~~~~~~l~~fI~~Vl~~TGa-kVDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 55 SCESAKQLRAFIDAVLAYTGA-KVDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp -HHHHHHHHHHHHHHHHHHT---EEEEEETCHHHHHHHHHHHC
T ss_pred chhhHHHHHHHHHHHHHhhCC-EEEEEEcCCcCHHHHHHHHHc
Confidence 011234566666666777788 999999999999998887643
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=98.47 E-value=3e-05 Score=72.93 Aligned_cols=112 Identities=13% Similarity=0.057 Sum_probs=75.7
Q ss_pred CCeEEEEeecC-CCCCCCCcEEEecCCCCChhcH------HHHHHhhcC--CceEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013006 143 PKFNVHYEKAG-CENVNSPPVLFLPGFGVGSFHY------EKQLKDLGK--DYRAWAIDFLGQGMSLPDEDPTPRSKEGD 213 (451)
Q Consensus 143 ~g~~l~y~~~g-~~~~~~p~VlllHG~~~~~~~~------~~~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~ 213 (451)
|++.|--..-. +...+...||+.-|.++.-+.. +..+..+++ +.+|+.+++||.|.|...
T Consensus 120 D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~----------- 188 (365)
T PF05677_consen 120 DGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGP----------- 188 (365)
T ss_pred CCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCC-----------
Confidence 56655554443 2223567999999988776651 123444433 689999999999999643
Q ss_pred chhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhC-----C--CCEEEEEeCcchHHHHHHHHhCCC----ccc
Q 013006 214 STEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI-----R--EPVYVVGNSLGGFVAVYFAACNPH----LVK 282 (451)
Q Consensus 214 ~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~-----~--~~v~lvGhS~GG~val~~A~~~P~----~v~ 282 (451)
.+.++++.|-.+.++.|. + +.+++.|||+||.++..++.++.. -|+
T Consensus 189 -----------------------~s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~~~~~dgi~ 245 (365)
T PF05677_consen 189 -----------------------PSRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEVLKGSDGIR 245 (365)
T ss_pred -----------------------CCHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcccccCCCee
Confidence 356777777777776662 2 679999999999999886666532 344
Q ss_pred eEEEec
Q 013006 283 GVTLLN 288 (451)
Q Consensus 283 ~lvl~~ 288 (451)
=+++-+
T Consensus 246 ~~~ikD 251 (365)
T PF05677_consen 246 WFLIKD 251 (365)
T ss_pred EEEEec
Confidence 444444
|
|
| >KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.1e-06 Score=77.22 Aligned_cols=160 Identities=15% Similarity=0.096 Sum_probs=105.0
Q ss_pred CcEEEecCCCC-ChhcHHHHHHhhcC-CceEEEEcCCCC-CCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccc
Q 013006 160 PPVLFLPGFGV-GSFHYEKQLKDLGK-DYRAWAIDFLGQ-GMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELA 236 (451)
Q Consensus 160 p~VlllHG~~~-~~~~~~~~~~~L~~-~~~Vi~~D~rG~-G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 236 (451)
..||++--..+ ....-+..++.++. ||.|+.+|+..= -.|.. ... .....| ++.
T Consensus 40 ~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~-~~~-----------~~~~~w---------~~~-- 96 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPS-LQK-----------SERPEW---------MKG-- 96 (242)
T ss_pred eEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCC-CCh-----------hhhHHH---------Hhc--
Confidence 35666655433 33346677777754 799999997532 11110 000 111112 211
Q ss_pred cCHHHHHHHHHHHHHHh---C-CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCC
Q 013006 237 YSVDLWQDQVCYFIKEV---I-REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWS 312 (451)
Q Consensus 237 ~s~~~~a~dv~~ll~~l---~-~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (451)
.+.+....++..+++.+ + .+++-++|++|||.++..+....| .+.+.+++-|+..
T Consensus 97 ~~~~~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~-------------------- 155 (242)
T KOG3043|consen 97 HSPPKIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFV-------------------- 155 (242)
T ss_pred CCcccchhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcC--------------------
Confidence 34444455555555554 3 578999999999999999988887 6777777766420
Q ss_pred CCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhh
Q 013006 313 GTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSR 392 (451)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (451)
+ .+.
T Consensus 156 ---------------------------------------------------------------------------d-~~D 159 (242)
T KOG3043|consen 156 ---------------------------------------------------------------------------D-SAD 159 (242)
T ss_pred ---------------------------------------------------------------------------C-hhH
Confidence 0 122
Q ss_pred ccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC-----CcEEEeCCCCCCcc
Q 013006 393 CQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE-----APYYEISPAGHCPH 439 (451)
Q Consensus 393 l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~-----~~~~~i~~~gH~~~ 439 (451)
..++++|||++.|+.|.++|+....++.+.+.+ .++.++++-+|-.+
T Consensus 160 ~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~ 211 (242)
T KOG3043|consen 160 IANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFV 211 (242)
T ss_pred HhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhh
Confidence 345789999999999999999988887777643 25889999999766
|
|
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.5e-05 Score=80.16 Aligned_cols=130 Identities=21% Similarity=0.253 Sum_probs=84.5
Q ss_pred Cccceeeec--CCeEEEEeecCCCC--CCCCcEEEecCCCCChhcHHHHHHh-------------------hcCCceEEE
Q 013006 134 ITSCFWEWK--PKFNVHYEKAGCEN--VNSPPVLFLPGFGVGSFHYEKQLKD-------------------LGKDYRAWA 190 (451)
Q Consensus 134 ~~~~~~~~~--~g~~l~y~~~g~~~--~~~p~VlllHG~~~~~~~~~~~~~~-------------------L~~~~~Vi~ 190 (451)
..+.++... .+..|+|......+ .++|.||.+.|.++++..|-.+.+. +.+..+|+.
T Consensus 11 ~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~ 90 (415)
T PF00450_consen 11 QYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLF 90 (415)
T ss_dssp EEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEE
T ss_pred EEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccccceEE
Confidence 345666666 67899987665432 4679999999999999888443211 123468999
Q ss_pred EcCC-CCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh-------CCCCEEEEE
Q 013006 191 IDFL-GQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV-------IREPVYVVG 262 (451)
Q Consensus 191 ~D~r-G~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l-------~~~~v~lvG 262 (451)
+|.| |.|.|...... ....+.++.++++..+|+.. ...+++|.|
T Consensus 91 iD~PvGtGfS~~~~~~----------------------------~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~G 142 (415)
T PF00450_consen 91 IDQPVGTGFSYGNDPS----------------------------DYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAG 142 (415)
T ss_dssp E--STTSTT-EESSGG----------------------------GGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEE
T ss_pred EeecCceEEeeccccc----------------------------cccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEc
Confidence 9955 99999643221 01247788888888777664 345899999
Q ss_pred eCcchHHHHHHHHh----C------CCccceEEEeccCC
Q 013006 263 NSLGGFVAVYFAAC----N------PHLVKGVTLLNATP 291 (451)
Q Consensus 263 hS~GG~val~~A~~----~------P~~v~~lvl~~~~~ 291 (451)
-|+||..+-.+|.. . +-.++++++.++..
T Consensus 143 ESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~ 181 (415)
T PF00450_consen 143 ESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWI 181 (415)
T ss_dssp ETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-S
T ss_pred cccccccchhhHHhhhhccccccccccccccceecCccc
Confidence 99999887666653 2 33589999999853
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.7e-05 Score=68.75 Aligned_cols=33 Identities=21% Similarity=0.296 Sum_probs=28.7
Q ss_pred CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 256 EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 256 ~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
+++.|||.|+||+.|..+|.++. + +.||+||+.
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g--~-~aVLiNPAv 92 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG--I-RQVIFNPNL 92 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC--C-CEEEECCCC
Confidence 57999999999999999999985 3 778889863
|
|
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=98.44 E-value=2.1e-07 Score=84.40 Aligned_cols=47 Identities=17% Similarity=0.290 Sum_probs=35.9
Q ss_pred HHHHHHHHh-C--CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCC
Q 013006 245 QVCYFIKEV-I--REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPF 292 (451)
Q Consensus 245 dv~~ll~~l-~--~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~ 292 (451)
...++|... . .++|.|+|.|.||.+|+.+|+.+| .|+++|.+++...
T Consensus 8 ~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~ 57 (213)
T PF08840_consen 8 EAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSV 57 (213)
T ss_dssp HHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB
T ss_pred HHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCcee
Confidence 344444443 2 368999999999999999999999 7999999998753
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.9e-07 Score=89.97 Aligned_cols=106 Identities=21% Similarity=0.276 Sum_probs=65.0
Q ss_pred CCCCCcEEEecCCCCCh--hcHHH-HHHh-hcC---CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCC
Q 013006 156 NVNSPPVLFLPGFGVGS--FHYEK-QLKD-LGK---DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKA 228 (451)
Q Consensus 156 ~~~~p~VlllHG~~~~~--~~~~~-~~~~-L~~---~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 228 (451)
+++.|++|++|||..+. ..|.. +.+. |.+ ++.||++||...-... .
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~-----Y---------------------- 120 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNN-----Y---------------------- 120 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS------H----------------------
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhcccc-----c----------------------
Confidence 35689999999998777 45654 4443 443 6999999996432110 0
Q ss_pred CccccccccCHHHHHHHHHHHHHHh------CCCCEEEEEeCcchHHHHHHHHhCCC--ccceEEEeccCCC
Q 013006 229 QPWASELAYSVDLWQDQVCYFIKEV------IREPVYVVGNSLGGFVAVYFAACNPH--LVKGVTLLNATPF 292 (451)
Q Consensus 229 ~~~~~~~~~s~~~~a~dv~~ll~~l------~~~~v~lvGhS~GG~val~~A~~~P~--~v~~lvl~~~~~~ 292 (451)
...........+.|..+|+.| ..++++|||||+||.+|-.++..... +|..++-++|+.+
T Consensus 121 ----~~a~~n~~~vg~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 121 ----PQAVANTRLVGRQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred ----cchhhhHHHHHHHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 000122334444444444443 34789999999999999999988877 8999999999754
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.43 E-value=2.9e-06 Score=84.85 Aligned_cols=130 Identities=18% Similarity=0.054 Sum_probs=90.1
Q ss_pred ecCCeEEEEeecCCCC----CCCCcEEEecCCCCCh-----hcHHHHH--Hhh-cCCceEEEEcCCCCCCCCCCCCCCCC
Q 013006 141 WKPKFNVHYEKAGCEN----VNSPPVLFLPGFGVGS-----FHYEKQL--KDL-GKDYRAWAIDFLGQGMSLPDEDPTPR 208 (451)
Q Consensus 141 ~~~g~~l~y~~~g~~~----~~~p~VlllHG~~~~~-----~~~~~~~--~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~ 208 (451)
.+.|.+++-....|.+ ++-|+++++-|.++-. +.|...+ ..| +.||-||.+|-||.......-..
T Consensus 620 s~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~--- 696 (867)
T KOG2281|consen 620 SKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFES--- 696 (867)
T ss_pred cCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHH---
Confidence 3567777766665432 3468999999987543 3333322 235 45899999999997554311000
Q ss_pred CCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhC---CCCEEEEEeCcchHHHHHHHHhCCCccceEE
Q 013006 209 SKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI---REPVYVVGNSLGGFVAVYFAACNPHLVKGVT 285 (451)
Q Consensus 209 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~---~~~v~lvGhS~GG~val~~A~~~P~~v~~lv 285 (451)
. =..+.....++|+++-++-+.++.+ .++|.+-|+|+||++++....++|+.++..|
T Consensus 697 --------~------------ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAI 756 (867)
T KOG2281|consen 697 --------H------------IKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAI 756 (867)
T ss_pred --------H------------HhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEe
Confidence 0 0011223688999999999999985 4789999999999999999999999888777
Q ss_pred EeccCCCC
Q 013006 286 LLNATPFW 293 (451)
Q Consensus 286 l~~~~~~~ 293 (451)
.=+|...|
T Consensus 757 AGapVT~W 764 (867)
T KOG2281|consen 757 AGAPVTDW 764 (867)
T ss_pred ccCcceee
Confidence 76665433
|
|
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=98.36 E-value=6.5e-06 Score=78.29 Aligned_cols=44 Identities=20% Similarity=0.265 Sum_probs=35.0
Q ss_pred CCCCEEEEeeCCCCCCChHHHHHHHHHC-----CCCcEEEeCCCCCCcc
Q 013006 396 NGVPICLIYGKEDPWVKPVWGLQVKRQV-----PEAPYYEISPAGHCPH 439 (451)
Q Consensus 396 i~~PvLii~G~~D~~v~~~~~~~l~~~l-----p~~~~~~i~~~gH~~~ 439 (451)
-++|++|.+|..|.++|+...+.+.+.+ .+++++.+++.+|...
T Consensus 218 P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~ 266 (290)
T PF03583_consen 218 PTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGA 266 (290)
T ss_pred CCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhh
Confidence 3799999999999999998887765543 3467788888999753
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=98.33 E-value=5.9e-06 Score=74.24 Aligned_cols=95 Identities=24% Similarity=0.263 Sum_probs=72.5
Q ss_pred EecCCC--CChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHH
Q 013006 164 FLPGFG--VGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDL 241 (451)
Q Consensus 164 llHG~~--~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~ 241 (451)
++|..+ ++...|..+...|...+.|+++|.+|++.+.... .+++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~g~~~~~~~~---------------------------------~~~~~ 48 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRGRRDVSALPLPGFGPGEPLP---------------------------------ASADA 48 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCCCccEEEecCCCCCCCCCCC---------------------------------CCHHH
Confidence 344433 6678899999999888999999999998764321 36677
Q ss_pred HHHHHHHHHHH-hCCCCEEEEEeCcchHHHHHHHHh---CCCccceEEEeccCC
Q 013006 242 WQDQVCYFIKE-VIREPVYVVGNSLGGFVAVYFAAC---NPHLVKGVTLLNATP 291 (451)
Q Consensus 242 ~a~dv~~ll~~-l~~~~v~lvGhS~GG~val~~A~~---~P~~v~~lvl~~~~~ 291 (451)
+++.+...+.. ....+++++|||+||.++..++.+ .++.+.+++++++.+
T Consensus 49 ~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 49 LVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAARLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred HHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHHHHHhCCCCCcEEEEEccCC
Confidence 77665554443 446789999999999999998886 456799999998753
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.32 E-value=5e-06 Score=76.43 Aligned_cols=107 Identities=12% Similarity=0.084 Sum_probs=66.3
Q ss_pred CCCcEEEecCCCCChhcHHH----HHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEK----QLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWAS 233 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~----~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 233 (451)
++..+||+||+..+...-.. +...+.-...++.+.||..|.-.. .. ... +
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~---Y~-----------------~d~------~ 70 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLG---YF-----------------YDR------E 70 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhh---hh-----------------hhh------h
Confidence 56799999999987554322 222333234899999998876211 00 000 0
Q ss_pred ccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHh----CC-----CccceEEEeccC
Q 013006 234 ELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAAC----NP-----HLVKGVTLLNAT 290 (451)
Q Consensus 234 ~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~----~P-----~~v~~lvl~~~~ 290 (451)
....+-+.+++-+..+.+..+.++|+|++||||+.+.+..... .+ .++..++|++|-
T Consensus 71 ~a~~s~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApD 136 (233)
T PF05990_consen 71 SARFSGPALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPD 136 (233)
T ss_pred hHHHHHHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCC
Confidence 0012334444444444444467899999999999999877654 22 368899999874
|
|
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.9e-06 Score=77.55 Aligned_cols=103 Identities=17% Similarity=0.143 Sum_probs=72.1
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELA 236 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 236 (451)
.=|.|+|+||+......|..++.+++. ||-|+++++-.--. +....+ .
T Consensus 45 ~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~---p~~~~E----------------------------i 93 (307)
T PF07224_consen 45 TYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLFP---PDGQDE----------------------------I 93 (307)
T ss_pred CccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcccC---CCchHH----------------------------H
Confidence 358999999999999999999999966 79999999875311 111100 0
Q ss_pred cCHHHHHHHHHHHHHHh-------CCCCEEEEEeCcchHHHHHHHHhCC--CccceEEEeccCC
Q 013006 237 YSVDLWQDQVCYFIKEV-------IREPVYVVGNSLGGFVAVYFAACNP--HLVKGVTLLNATP 291 (451)
Q Consensus 237 ~s~~~~a~dv~~ll~~l-------~~~~v~lvGhS~GG~val~~A~~~P--~~v~~lvl~~~~~ 291 (451)
-+....++.+..-+.++ ++.++.++|||.||-+|..+|..+- -.+.++|.++|..
T Consensus 94 ~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~ 157 (307)
T PF07224_consen 94 KSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVA 157 (307)
T ss_pred HHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccC
Confidence 12222223333223332 3468999999999999999999773 2589999999875
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.24 E-value=5.4e-06 Score=83.64 Aligned_cols=129 Identities=16% Similarity=0.032 Sum_probs=88.2
Q ss_pred CCccceeeecCCeEEEEeecCCCCC-CCCcEEEecCCCCChh---cH--HHHHH---hh-cCCceEEEEcCCCCCCCCCC
Q 013006 133 PITSCFWEWKPKFNVHYEKAGCENV-NSPPVLFLPGFGVGSF---HY--EKQLK---DL-GKDYRAWAIDFLGQGMSLPD 202 (451)
Q Consensus 133 ~~~~~~~~~~~g~~l~y~~~g~~~~-~~p~VlllHG~~~~~~---~~--~~~~~---~L-~~~~~Vi~~D~rG~G~S~~~ 202 (451)
..++..++.+||++|+...+-|.+. +.|+++..+-++-... .+ ....+ .+ ++||.|+..|.||.|.|+..
T Consensus 18 ~~~~v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~ 97 (563)
T COG2936 18 IERDVMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGV 97 (563)
T ss_pred eeeeeeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcc
Confidence 4556788899999999998877533 3477777772222221 11 11222 33 66899999999999999754
Q ss_pred CCCCCCCCCCCchhhhhccccCCCCCCccccccccC-HHHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhCCC
Q 013006 203 EDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYS-VDLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACNPH 279 (451)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s-~~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~P~ 279 (451)
-.+. ++ -.+-.-|+.++|.+... .+|..+|.|++|+..+.+|+..|.
T Consensus 98 ~~~~------------------------------~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pP 147 (563)
T COG2936 98 FDPE------------------------------SSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPP 147 (563)
T ss_pred ccee------------------------------ccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCc
Confidence 3331 12 11112255555555543 689999999999999999999988
Q ss_pred ccceEEEeccCC
Q 013006 280 LVKGVTLLNATP 291 (451)
Q Consensus 280 ~v~~lvl~~~~~ 291 (451)
-+++++.+.+..
T Consensus 148 aLkai~p~~~~~ 159 (563)
T COG2936 148 ALKAIAPTEGLV 159 (563)
T ss_pred hheeeccccccc
Confidence 899999888753
|
|
| >PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=98.23 E-value=7.2e-05 Score=66.82 Aligned_cols=80 Identities=21% Similarity=0.393 Sum_probs=55.4
Q ss_pred CCcEEEecCCCCChhcHHHHHHhhcCCceE-EEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccccc
Q 013006 159 SPPVLFLPGFGVGSFHYEKQLKDLGKDYRA-WAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAY 237 (451)
Q Consensus 159 ~p~VlllHG~~~~~~~~~~~~~~L~~~~~V-i~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 237 (451)
...|||..|+|.+...+..+. +..+++| +++|+|..-.
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~--~~~~~D~l~~yDYr~l~~--------------------------------------- 49 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLI--LPENYDVLICYDYRDLDF--------------------------------------- 49 (213)
T ss_pred CeEEEEEecCCCChHHhhhcc--CCCCccEEEEecCccccc---------------------------------------
Confidence 368999999999988776553 2345554 6788874311
Q ss_pred CHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCC
Q 013006 238 SVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPF 292 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~ 292 (451)
+. | --+.+.++|||+|||-.+|..+....| ++..|.++++++
T Consensus 50 d~-----~------~~~y~~i~lvAWSmGVw~A~~~l~~~~--~~~aiAINGT~~ 91 (213)
T PF04301_consen 50 DF-----D------LSGYREIYLVAWSMGVWAANRVLQGIP--FKRAIAINGTPY 91 (213)
T ss_pred cc-----c------cccCceEEEEEEeHHHHHHHHHhccCC--cceeEEEECCCC
Confidence 10 1 124588999999999999988765543 677777887754
|
|
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.12 E-value=9.3e-06 Score=78.89 Aligned_cols=99 Identities=18% Similarity=0.258 Sum_probs=79.5
Q ss_pred CCcEEEecCCCCChhcHHHHHHhhcC-Cce---EEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccc
Q 013006 159 SPPVLFLPGFGVGSFHYEKQLKDLGK-DYR---AWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASE 234 (451)
Q Consensus 159 ~p~VlllHG~~~~~~~~~~~~~~L~~-~~~---Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 234 (451)
.-+++++||++.+...|..+...+.. ++. ++.+++++..... ..
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~----------------------------- 106 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGGDGTY---SL----------------------------- 106 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhhcchHHHhcccccccccccCCCc---cc-----------------------------
Confidence 35899999998888888888777754 454 8888888762211 10
Q ss_pred cccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCC--CccceEEEeccC
Q 013006 235 LAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNP--HLVKGVTLLNAT 290 (451)
Q Consensus 235 ~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P--~~v~~lvl~~~~ 290 (451)
....+.+...+.+++...+.+++.|+||||||.+...++..++ .+|+.++.++++
T Consensus 107 -~~~~~ql~~~V~~~l~~~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp 163 (336)
T COG1075 107 -AVRGEQLFAYVDEVLAKTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTP 163 (336)
T ss_pred -cccHHHHHHHHHHHHhhcCCCceEEEeecccchhhHHHHhhcCccceEEEEEEeccC
Confidence 1466777788888888889999999999999999999999988 899999999985
|
|
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=97.99 E-value=7.5e-05 Score=68.83 Aligned_cols=129 Identities=17% Similarity=0.100 Sum_probs=82.8
Q ss_pred CCeEEEEeecCCCC--CCCCcEEEecCCCCChhcHHHHH--HhhcC--CceEEEEcCCCCCCCCCCCCCCCCCCCCCchh
Q 013006 143 PKFNVHYEKAGCEN--VNSPPVLFLPGFGVGSFHYEKQL--KDLGK--DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTE 216 (451)
Q Consensus 143 ~g~~l~y~~~g~~~--~~~p~VlllHG~~~~~~~~~~~~--~~L~~--~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~ 216 (451)
+|.+..|+.+-|.. ...|.||++||-.++...++... ..|++ +|-|+.+|- +..+-....
T Consensus 43 ~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg--~~~~wn~~~------------ 108 (312)
T COG3509 43 NGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDG--YDRAWNANG------------ 108 (312)
T ss_pred CCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCc--cccccCCCc------------
Confidence 45666666555432 23478999999998887766554 55644 688888852 222210000
Q ss_pred hhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCC--CEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 217 EKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIRE--PVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 217 ~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~--~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
...|.-..+ .....-++..+.+-+..++.+.+++ +|++.|.|-||.++..++..+|+.+.++..++...
T Consensus 109 --~~~~~~p~~----~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 109 --CGNWFGPAD----RRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred --ccccCCccc----ccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 000000000 0001135556666666777777776 79999999999999999999999999999998764
|
|
| >KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.95 E-value=8.3e-05 Score=65.29 Aligned_cols=99 Identities=16% Similarity=0.212 Sum_probs=72.2
Q ss_pred CCcEEEecCCCCChhc---HHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccc
Q 013006 159 SPPVLFLPGFGVGSFH---YEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASE 234 (451)
Q Consensus 159 ~p~VlllHG~~~~~~~---~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 234 (451)
+..|||+-|++...-. -..+...|.+ ++.++-+-++.+- .-||.
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy----------------------~G~Gt---------- 83 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSY----------------------NGYGT---------- 83 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccc----------------------ccccc----------
Confidence 4679999999877543 3455666644 6888887765320 01111
Q ss_pred cccCHHHHHHHHHHHHHHhCC----CCEEEEEeCcchHHHHHHHHh--CCCccceEEEeccCC
Q 013006 235 LAYSVDLWQDQVCYFIKEVIR----EPVYVVGNSLGGFVAVYFAAC--NPHLVKGVTLLNATP 291 (451)
Q Consensus 235 ~~~s~~~~a~dv~~ll~~l~~----~~v~lvGhS~GG~val~~A~~--~P~~v~~lvl~~~~~ 291 (451)
.++++-++|+++++++++. .+|+|+|||.|+.=.+++... .|..+++.|+.+|..
T Consensus 84 --~slk~D~edl~~l~~Hi~~~~fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVS 144 (299)
T KOG4840|consen 84 --FSLKDDVEDLKCLLEHIQLCGFSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVS 144 (299)
T ss_pred --ccccccHHHHHHHHHHhhccCcccceEEEecCccchHHHHHHHhccchHHHHHHHHhCccc
Confidence 5788889999999998864 479999999999988888732 467899999988864
|
|
| >KOG3101 consensus Esterase D [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.91 E-value=9.3e-05 Score=64.51 Aligned_cols=117 Identities=21% Similarity=0.368 Sum_probs=78.5
Q ss_pred CCCcEEEecCCCCChhcHHH--HHHhhc--CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCC-----
Q 013006 158 NSPPVLFLPGFGVGSFHYEK--QLKDLG--KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKA----- 228 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~--~~~~L~--~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~----- 228 (451)
.-|++.++-|+....+.+-. ..+..+ .++.|+++|..=.|-.- ++.++.|.||.-+
T Consensus 43 ~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v---------------~g~~eswDFG~GAGFYvn 107 (283)
T KOG3101|consen 43 RCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEV---------------AGDDESWDFGQGAGFYVN 107 (283)
T ss_pred cCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCcccc---------------CCCcccccccCCceeEEe
Confidence 35889999999877766532 222222 26889999965444321 1556689888754
Q ss_pred ---CccccccccCHHHH-HHHHHHHHHH----hCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 229 ---QPWASELAYSVDLW-QDQVCYFIKE----VIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 229 ---~~~~~~~~~s~~~~-a~dv~~ll~~----l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
++|... |.+.++ ++.+-+++.. +...++.|.||||||.=|+..+.+.|.+.+++-..+|..
T Consensus 108 At~epw~~~--yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~ 176 (283)
T KOG3101|consen 108 ATQEPWAKH--YRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPIC 176 (283)
T ss_pred cccchHhhh--hhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceecccccc
Confidence 666553 333333 3444444442 233578999999999999999999999999988877753
|
|
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=97.88 E-value=2.5e-05 Score=71.05 Aligned_cols=89 Identities=20% Similarity=0.223 Sum_probs=50.2
Q ss_pred CCcEEEecCCCCChhcHHHHHHhhcC---CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccc
Q 013006 159 SPPVLFLPGFGVGSFHYEKQLKDLGK---DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASEL 235 (451)
Q Consensus 159 ~p~VlllHG~~~~~~~~~~~~~~L~~---~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 235 (451)
.-.|||+||+.++...|..+...|.. ++.--.+...++.... .... +..
T Consensus 4 ~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~--~~T~--------------------------~gI 55 (217)
T PF05057_consen 4 VHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNE--FKTF--------------------------DGI 55 (217)
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccc--cccc--------------------------hhh
Confidence 45799999999999999877766643 2211122222221110 0000 000
Q ss_pred ccCHHHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHH
Q 013006 236 AYSVDLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAA 275 (451)
Q Consensus 236 ~~s~~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~ 275 (451)
....+.+++.|.+.++.... .++.+|||||||.++-.+..
T Consensus 56 ~~~g~rL~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 56 DVCGERLAEEILEHIKDYESKIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred HHHHHHHHHHHHHhccccccccccceEEEecccHHHHHHHHH
Confidence 12233445555555554444 48999999999999865544
|
|
| >KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00016 Score=72.28 Aligned_cols=47 Identities=17% Similarity=0.161 Sum_probs=41.0
Q ss_pred CCCCCEEEEeeCCCCCCChHHHHHHHHHCCC-CcEEEeCCCCCCcccc
Q 013006 395 MNGVPICLIYGKEDPWVKPVWGLQVKRQVPE-APYYEISPAGHCPHDE 441 (451)
Q Consensus 395 ~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~-~~~~~i~~~gH~~~~e 441 (451)
.++.|+|||-|.+|..++++..+.+.++... .+++++.+++|.+-.-
T Consensus 302 dmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmaip 349 (784)
T KOG3253|consen 302 DMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAIP 349 (784)
T ss_pred hcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccCC
Confidence 4689999999999999999999999888754 6899999999987543
|
|
| >KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00029 Score=65.14 Aligned_cols=124 Identities=15% Similarity=0.182 Sum_probs=72.6
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCC-CCCCCCCCCCCchhhhhccccCCCCCCcccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPD-EDPTPRSKEGDSTEEKNFLWGFGDKAQPWASEL 235 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~-~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 235 (451)
+-|.|||.||++++...|..+.-.|+. ||-|.++..|-+-.+--- -.+.+ . .|.-.+.|-.-...+.-.++.
T Consensus 117 k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~-~-----n~~lveq~~~ir~v~~~ekef 190 (399)
T KOG3847|consen 117 KYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKH-E-----NEPLVEQWIKIRLVEANEKEF 190 (399)
T ss_pred CccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccc-c-----CCcccccceEeeeeccCceeE
Confidence 458999999999999999999999965 799999999876544100 00000 0 001122222111111111111
Q ss_pred -------ccCHHHHHHHHHHHHHHh------------------------CCCCEEEEEeCcchHHHHHHHHhCCCccceE
Q 013006 236 -------AYSVDLWQDQVCYFIKEV------------------------IREPVYVVGNSLGGFVAVYFAACNPHLVKGV 284 (451)
Q Consensus 236 -------~~s~~~~a~dv~~ll~~l------------------------~~~~v~lvGhS~GG~val~~A~~~P~~v~~l 284 (451)
.....+....+ .+|+.+ .-.++.++|||+||++++...+.+. .++..
T Consensus 191 ~irNeqv~~R~~Ec~~aL-~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~Frca 268 (399)
T KOG3847|consen 191 HIRNEQVGQRAQECQKAL-KILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCA 268 (399)
T ss_pred EeeCHHHHHHHHHHHHHH-HHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc-ceeee
Confidence 11122222222 222222 1246899999999999998877764 68888
Q ss_pred EEecc
Q 013006 285 TLLNA 289 (451)
Q Consensus 285 vl~~~ 289 (451)
|++++
T Consensus 269 I~lD~ 273 (399)
T KOG3847|consen 269 IALDA 273 (399)
T ss_pred eeeee
Confidence 88886
|
|
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00014 Score=69.05 Aligned_cols=107 Identities=17% Similarity=0.266 Sum_probs=71.5
Q ss_pred CCCcEEEecCCCCChhc-HH---HHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccc
Q 013006 158 NSPPVLFLPGFGVGSFH-YE---KQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWAS 233 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~-~~---~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 233 (451)
.+..+||+||++.+-+. -. .+...+......+.+-||-.|.--. +.++. +
T Consensus 115 ~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~--------------------Yn~Dr------e 168 (377)
T COG4782 115 AKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLG--------------------YNYDR------E 168 (377)
T ss_pred CCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeee--------------------cccch------h
Confidence 46789999999866432 22 2333344457788999997765310 00000 1
Q ss_pred ccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHh--------CCCccceEEEeccC
Q 013006 234 ELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAAC--------NPHLVKGVTLLNAT 290 (451)
Q Consensus 234 ~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~--------~P~~v~~lvl~~~~ 290 (451)
...|+-+++..-+..+.+....++|+|++||||..++++...+ .+.+++-+||.+|-
T Consensus 169 S~~~Sr~aLe~~lr~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPD 233 (377)
T COG4782 169 STNYSRPALERLLRYLATDKPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPD 233 (377)
T ss_pred hhhhhHHHHHHHHHHHHhCCCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCC
Confidence 1136777777777777777778999999999999999877654 24468888888774
|
|
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00013 Score=65.46 Aligned_cols=114 Identities=23% Similarity=0.264 Sum_probs=75.2
Q ss_pred CCcEEEecCCCCChhcHHHHHHhhcCCc------eEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhh--ccccCCCCCCc
Q 013006 159 SPPVLFLPGFGVGSFHYEKQLKDLGKDY------RAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKN--FLWGFGDKAQP 230 (451)
Q Consensus 159 ~p~VlllHG~~~~~~~~~~~~~~L~~~~------~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~--~~w~~~~~~~~ 230 (451)
.-|.+|+||.+++.......+..|.+.+ -++.+|--| |-.....- ++ ...+ .-.+|++..
T Consensus 45 ~iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dg---slk~tGk~--~K-----d~~nP~I~~gfe~n~-- 112 (288)
T COG4814 45 AIPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDG---SLKVTGKI--SK-----DAKNPIIEFGFEDNT-- 112 (288)
T ss_pred ccceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCC---cEEEeeee--cc-----cCCCCeEEEEEecCc--
Confidence 4589999999999999999998886544 356666655 21110000 00 0111 113444433
Q ss_pred cccccccCHHHHHHHHHHHHHHh----CCCCEEEEEeCcchHHHHHHHHhCCC-----ccceEEEeccC
Q 013006 231 WASELAYSVDLWQDQVCYFIKEV----IREPVYVVGNSLGGFVAVYFAACNPH-----LVKGVTLLNAT 290 (451)
Q Consensus 231 ~~~~~~~s~~~~a~dv~~ll~~l----~~~~v~lvGhS~GG~val~~A~~~P~-----~v~~lvl~~~~ 290 (451)
-+..++...++.++..| +++++.+|||||||.-...++..+.. .++++|.+++.
T Consensus 113 ------~s~~~~s~wlk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gp 175 (288)
T COG4814 113 ------ASGLDQSKWLKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGP 175 (288)
T ss_pred ------CchhhHHHHHHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccc
Confidence 35666666666666555 68999999999999999988886532 48999999874
|
|
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.0009 Score=66.83 Aligned_cols=51 Identities=20% Similarity=0.236 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHh-----CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 240 DLWQDQVCYFIKEV-----IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 240 ~~~a~dv~~ll~~l-----~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
+.+++++.-++++. +.++.+|+|+||||..|+.++.++|+++.+++.+++.
T Consensus 267 ~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 267 LAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGS 322 (411)
T ss_pred HHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccc
Confidence 44566776666654 2356899999999999999999999999999999975
|
|
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00042 Score=70.20 Aligned_cols=108 Identities=25% Similarity=0.289 Sum_probs=69.2
Q ss_pred CCcEEEecCCCCChhc-H--HHHHHhhcC--CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccc
Q 013006 159 SPPVLFLPGFGVGSFH-Y--EKQLKDLGK--DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWAS 233 (451)
Q Consensus 159 ~p~VlllHG~~~~~~~-~--~~~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 233 (451)
+|.+|++ |.-+.... | ..++..|++ +--|+++.+|-+|.|.+....+. ..
T Consensus 29 gpifl~~-ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~------------------------~n 83 (434)
T PF05577_consen 29 GPIFLYI-GGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLST------------------------EN 83 (434)
T ss_dssp SEEEEEE---SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGG------------------------ST
T ss_pred CCEEEEE-CCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccch------------------------hh
Confidence 5555555 44444432 2 335566765 57899999999999976543211 01
Q ss_pred ccccCHHHHHHHHHHHHHHhC-------CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 234 ELAYSVDLWQDQVCYFIKEVI-------REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 234 ~~~~s~~~~a~dv~~ll~~l~-------~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
....|.++..+|+..|++++. ..|++++|-|+||++|..+-.+||+.|.+.+.-+++.
T Consensus 84 L~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv 148 (434)
T PF05577_consen 84 LRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPV 148 (434)
T ss_dssp TTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--C
T ss_pred HHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEecccee
Confidence 123799999999999998764 1479999999999999999999999999998887753
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.0077 Score=55.71 Aligned_cols=56 Identities=14% Similarity=0.129 Sum_probs=44.0
Q ss_pred CCCCCEEEEeeCCCCCCChHHHHHHHHHCC----CCcEEEeCCCCCCcccc-ChHHHHhhh
Q 013006 395 MNGVPICLIYGKEDPWVKPVWGLQVKRQVP----EAPYYEISPAGHCPHDE-VPEVCSLCL 450 (451)
Q Consensus 395 ~i~~PvLii~G~~D~~v~~~~~~~l~~~lp----~~~~~~i~~~gH~~~~e-~p~~v~~~I 450 (451)
...+|-|+++++.|.+++.+..++.++... +++...++++.|+.|+. +|++..+++
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v 236 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAV 236 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHH
Confidence 356899999999999999987776655432 25677788999997765 888887765
|
|
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.024 Score=57.06 Aligned_cols=132 Identities=19% Similarity=0.238 Sum_probs=79.2
Q ss_pred CccceeeecC--CeEEEEeecCCC--CCCCCcEEEecCCCCChhcHHHHH---H-------------hh-------cCCc
Q 013006 134 ITSCFWEWKP--KFNVHYEKAGCE--NVNSPPVLFLPGFGVGSFHYEKQL---K-------------DL-------GKDY 186 (451)
Q Consensus 134 ~~~~~~~~~~--g~~l~y~~~g~~--~~~~p~VlllHG~~~~~~~~~~~~---~-------------~L-------~~~~ 186 (451)
..+.+++..+ +..++|...... ..+.|.||.+.|.++.+..+-.+. + .| .+..
T Consensus 37 ~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~a 116 (433)
T PLN03016 37 LETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMA 116 (433)
T ss_pred EEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcC
Confidence 4456666644 577888765432 235699999999988887542211 0 11 1247
Q ss_pred eEEEEc-CCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh---CCCCEEEEE
Q 013006 187 RAWAID-FLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV---IREPVYVVG 262 (451)
Q Consensus 187 ~Vi~~D-~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l---~~~~v~lvG 262 (451)
+|+.+| .-|.|.|....... .. .+ ..+.+++.+.+..+++.. ...+++|.|
T Consensus 117 nllfiDqPvGtGfSy~~~~~~-~~-----------------------~d-~~~a~~~~~fl~~f~~~~p~~~~~~~yi~G 171 (433)
T PLN03016 117 NIIFLDQPVGSGFSYSKTPID-KT-----------------------GD-ISEVKRTHEFLQKWLSRHPQYFSNPLYVVG 171 (433)
T ss_pred cEEEecCCCCCCccCCCCCCC-cc-----------------------CC-HHHHHHHHHHHHHHHHhChhhcCCCEEEEc
Confidence 899999 55899985322110 00 00 012234445555555443 346899999
Q ss_pred eCcchHHHHHHHHh----C------CCccceEEEeccC
Q 013006 263 NSLGGFVAVYFAAC----N------PHLVKGVTLLNAT 290 (451)
Q Consensus 263 hS~GG~val~~A~~----~------P~~v~~lvl~~~~ 290 (451)
.|+||..+-.+|.. . +=.++++++-++.
T Consensus 172 ESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~ 209 (433)
T PLN03016 172 DSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPV 209 (433)
T ss_pred cCccceehHHHHHHHHhhcccccCCcccceeeEecCCC
Confidence 99999877666653 1 1257899988874
|
|
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00018 Score=67.00 Aligned_cols=51 Identities=22% Similarity=0.450 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHh-CC--CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 240 DLWQDQVCYFIKEV-IR--EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 240 ~~~a~dv~~ll~~l-~~--~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
+.+.++|..+|++. .. ++..|+|+||||..|+.++.+||+.+.+++.+++.
T Consensus 96 ~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~ 149 (251)
T PF00756_consen 96 TFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGA 149 (251)
T ss_dssp HHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEE
T ss_pred eehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcc
Confidence 44556777776654 32 23799999999999999999999999999999975
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00075 Score=69.70 Aligned_cols=100 Identities=22% Similarity=0.206 Sum_probs=59.0
Q ss_pred CCCCcEEEecCCCCChhcHHHHHHhhc-----------------CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhh
Q 013006 157 VNSPPVLFLPGFGVGSFHYEKQLKDLG-----------------KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKN 219 (451)
Q Consensus 157 ~~~p~VlllHG~~~~~~~~~~~~~~L~-----------------~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~ 219 (451)
.++-||||++|..++...-+.++..-. .+++..++|+=+
T Consensus 87 lsGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnE------------------------ 142 (973)
T KOG3724|consen 87 LSGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNE------------------------ 142 (973)
T ss_pred CCCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccc------------------------
Confidence 457899999999998877665543322 124455555432
Q ss_pred ccccCCCCCCccccccccCHHHHHHHHHHHHH----HhCC---------CCEEEEEeCcchHHHHHHHHh---CCCccce
Q 013006 220 FLWGFGDKAQPWASELAYSVDLWQDQVCYFIK----EVIR---------EPVYVVGNSLGGFVAVYFAAC---NPHLVKG 283 (451)
Q Consensus 220 ~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~----~l~~---------~~v~lvGhS~GG~val~~A~~---~P~~v~~ 283 (451)
........++.++++-+.+.|+ .... ..|++|||||||.+|..++.. .+..|.-
T Consensus 143 ----------e~tAm~G~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVnt 212 (973)
T KOG3724|consen 143 ----------EFTAMHGHILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNT 212 (973)
T ss_pred ----------hhhhhccHhHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhh
Confidence 1111112455555554444443 2222 249999999999999876643 2445666
Q ss_pred EEEeccC
Q 013006 284 VTLLNAT 290 (451)
Q Consensus 284 lvl~~~~ 290 (451)
++..+++
T Consensus 213 IITlssP 219 (973)
T KOG3724|consen 213 IITLSSP 219 (973)
T ss_pred hhhhcCc
Confidence 6666654
|
|
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0026 Score=59.60 Aligned_cols=97 Identities=22% Similarity=0.269 Sum_probs=63.7
Q ss_pred CCcEEEecCCC--CChhcHHHHHHhhc--CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccc
Q 013006 159 SPPVLFLPGFG--VGSFHYEKQLKDLG--KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASE 234 (451)
Q Consensus 159 ~p~VlllHG~~--~~~~~~~~~~~~L~--~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 234 (451)
..|||+.||++ .+...+..+.+.+. .++.+..+- .|-+... . +
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~~---s----------------~------------- 72 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQD---S----------------L------------- 72 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCccc---c----------------c-------------
Confidence 46999999999 44556777777664 255444443 2322100 0 0
Q ss_pred cccCHHHHHHHHHHHHHH---hCCCCEEEEEeCcchHHHHHHHHhCCC--ccceEEEeccC
Q 013006 235 LAYSVDLWQDQVCYFIKE---VIREPVYVVGNSLGGFVAVYFAACNPH--LVKGVTLLNAT 290 (451)
Q Consensus 235 ~~~s~~~~a~dv~~ll~~---l~~~~v~lvGhS~GG~val~~A~~~P~--~v~~lvl~~~~ 290 (451)
...+.++++.+.+-+.. +. +=+++||+|.||.++-.++.+.|+ .|+.+|.+++.
T Consensus 73 -~~~~~~Qv~~vce~l~~~~~L~-~G~naIGfSQGglflRa~ierc~~~p~V~nlISlggp 131 (306)
T PLN02606 73 -FMPLRQQASIACEKIKQMKELS-EGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGP 131 (306)
T ss_pred -ccCHHHHHHHHHHHHhcchhhc-CceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCC
Confidence 13455555555444433 22 349999999999999999999876 59999999975
|
|
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.039 Score=55.56 Aligned_cols=132 Identities=20% Similarity=0.268 Sum_probs=77.6
Q ss_pred CccceeeecC--CeEEEEeecCCC--CCCCCcEEEecCCCCChhcHHHHHH----------------hh-------cCCc
Q 013006 134 ITSCFWEWKP--KFNVHYEKAGCE--NVNSPPVLFLPGFGVGSFHYEKQLK----------------DL-------GKDY 186 (451)
Q Consensus 134 ~~~~~~~~~~--g~~l~y~~~g~~--~~~~p~VlllHG~~~~~~~~~~~~~----------------~L-------~~~~ 186 (451)
....+++..+ +..++|...... ..+.|.|+.+.|.++.+..+-.+.+ .| .+..
T Consensus 39 ~~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~a 118 (437)
T PLN02209 39 LETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTA 118 (437)
T ss_pred EEEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcC
Confidence 3455666643 567777665432 2346999999999988877533221 11 1236
Q ss_pred eEEEEc-CCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh---CCCCEEEEE
Q 013006 187 RAWAID-FLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV---IREPVYVVG 262 (451)
Q Consensus 187 ~Vi~~D-~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l---~~~~v~lvG 262 (451)
+++.+| ..|.|.|....... .. .+ .-+.+++.+.+..|++.. ...+++|.|
T Consensus 119 nllfiDqPvGtGfSy~~~~~~-~~-----------------------~~-~~~a~~~~~fl~~f~~~~p~~~~~~~yi~G 173 (437)
T PLN02209 119 NIIFLDQPVGSGFSYSKTPIE-RT-----------------------SD-TSEVKKIHEFLQKWLIKHPQFLSNPFYVVG 173 (437)
T ss_pred cEEEecCCCCCCccCCCCCCC-cc-----------------------CC-HHHHHHHHHHHHHHHHhCccccCCCEEEEe
Confidence 799999 55889885322110 00 00 012233344444444433 235899999
Q ss_pred eCcchHHHHHHHHh----C------CCccceEEEeccC
Q 013006 263 NSLGGFVAVYFAAC----N------PHLVKGVTLLNAT 290 (451)
Q Consensus 263 hS~GG~val~~A~~----~------P~~v~~lvl~~~~ 290 (451)
.|+||..+-.+|.. . +=.++++++.++.
T Consensus 174 ESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~ 211 (437)
T PLN02209 174 DSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPI 211 (437)
T ss_pred cCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcc
Confidence 99999877666653 1 1257888888874
|
|
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00046 Score=58.08 Aligned_cols=87 Identities=21% Similarity=0.306 Sum_probs=64.5
Q ss_pred EEEecCCCCChhcHHHHH--HhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCH
Q 013006 162 VLFLPGFGVGSFHYEKQL--KDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSV 239 (451)
Q Consensus 162 VlllHG~~~~~~~~~~~~--~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~ 239 (451)
||++|||..+......++ +.+.. |.|-.+.+.+... .++
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~-------~~~~i~y~~p~l~--------------------------------h~p 42 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDE-------DVRDIEYSTPHLP--------------------------------HDP 42 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhc-------cccceeeecCCCC--------------------------------CCH
Confidence 899999999887776543 33443 3333444443222 478
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 240 DLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
...++.+..++..++.+...|+|-|+||+.|..++.++. +++ |++||+
T Consensus 43 ~~a~~ele~~i~~~~~~~p~ivGssLGGY~At~l~~~~G--ira-v~~NPa 90 (191)
T COG3150 43 QQALKELEKAVQELGDESPLIVGSSLGGYYATWLGFLCG--IRA-VVFNPA 90 (191)
T ss_pred HHHHHHHHHHHHHcCCCCceEEeecchHHHHHHHHHHhC--Chh-hhcCCC
Confidence 889999999999999888999999999999999999874 544 455664
|
|
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00096 Score=66.32 Aligned_cols=51 Identities=25% Similarity=0.448 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHh---CCCCEEEEEeCcchHHHHHHHHhCCC------ccceEEEeccC
Q 013006 240 DLWQDQVCYFIKEV---IREPVYVVGNSLGGFVAVYFAACNPH------LVKGVTLLNAT 290 (451)
Q Consensus 240 ~~~a~dv~~ll~~l---~~~~v~lvGhS~GG~val~~A~~~P~------~v~~lvl~~~~ 290 (451)
+++...++.+++.. ..+||+||||||||.++..+....+. .|+++|.++++
T Consensus 100 ~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p 159 (389)
T PF02450_consen 100 DEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTP 159 (389)
T ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCC
Confidence 35555566666544 35899999999999999999988753 59999999974
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0016 Score=60.51 Aligned_cols=103 Identities=17% Similarity=0.197 Sum_probs=57.6
Q ss_pred CCCcEEEecCCCCCh---hcHHHHHHhh---cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcc
Q 013006 158 NSPPVLFLPGFGVGS---FHYEKQLKDL---GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPW 231 (451)
Q Consensus 158 ~~p~VlllHG~~~~~---~~~~~~~~~L---~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 231 (451)
+-.|||+.||+|.+. ..+..+...+ -.|..|.+++. |-+.++ ...+.+|
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i-g~~~~~---------------D~~~s~f--------- 58 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI-GNDPSE---------------DVENSFF--------- 58 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--S-SSSHHH---------------HHHHHHH---------
T ss_pred CCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE-CCCcch---------------hhhhhHH---------
Confidence 346899999999753 3455444433 34677888876 222210 0112222
Q ss_pred ccccccCHHHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhCCC-ccceEEEeccC
Q 013006 232 ASELAYSVDLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACNPH-LVKGVTLLNAT 290 (451)
Q Consensus 232 ~~~~~~s~~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~P~-~v~~lvl~~~~ 290 (451)
..+.+.++.+.+.+..... +=+++||+|.||.++-.++.+.|+ .|+.+|.+++.
T Consensus 59 -----~~v~~Qv~~vc~~l~~~p~L~~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 59 -----GNVNDQVEQVCEQLANDPELANGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp -----SHHHHHHHHHHHHHHH-GGGTT-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred -----HHHHHHHHHHHHHHhhChhhhcceeeeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 4567777777776665321 459999999999999999999864 69999999974
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0069 Score=55.18 Aligned_cols=95 Identities=22% Similarity=0.266 Sum_probs=64.7
Q ss_pred CcEEEecCCCCChhc--HHHHHHhhcC--CceEEEEcCCCCC--CCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccc
Q 013006 160 PPVLFLPGFGVGSFH--YEKQLKDLGK--DYRAWAIDFLGQG--MSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWAS 233 (451)
Q Consensus 160 p~VlllHG~~~~~~~--~~~~~~~L~~--~~~Vi~~D~rG~G--~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 233 (451)
.|+|++||++.+... ...+.+.+.+ +..|.+.|. |-| .|.
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~~~s~--------------------------------- 69 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGIKDSS--------------------------------- 69 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCcchhh---------------------------------
Confidence 689999999988766 6666666654 678888885 444 111
Q ss_pred ccccCHHHHHHHHHHHHHHhC--CCCEEEEEeCcchHHHHHHHHhCCC-ccceEEEeccC
Q 013006 234 ELAYSVDLWQDQVCYFIKEVI--REPVYVVGNSLGGFVAVYFAACNPH-LVKGVTLLNAT 290 (451)
Q Consensus 234 ~~~~s~~~~a~dv~~ll~~l~--~~~v~lvGhS~GG~val~~A~~~P~-~v~~lvl~~~~ 290 (451)
...+.++++.+.+.+.... .+=+++||.|.||.++-.++..-++ .|+.+|.+++.
T Consensus 70 --l~pl~~Qv~~~ce~v~~m~~lsqGynivg~SQGglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 70 --LMPLWEQVDVACEKVKQMPELSQGYNIVGYSQGGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred --hccHHHHHHHHHHHHhcchhccCceEEEEEccccHHHHHHHHhCCCCCcceeEeccCC
Confidence 1244455554444443221 1348999999999999888876543 69999999874
|
|
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0016 Score=67.23 Aligned_cols=53 Identities=17% Similarity=0.117 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHh--CCCccceEEEeccCCC
Q 013006 240 DLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAAC--NPHLVKGVTLLNATPF 292 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~--~P~~v~~lvl~~~~~~ 292 (451)
....+.|++-++..+. ++|+|+|+|.||..+..++.. .+.+++++|++++...
T Consensus 158 ~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 158 RLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 3333444444555554 579999999999998887775 3457999999987643
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0033 Score=61.19 Aligned_cols=47 Identities=17% Similarity=0.152 Sum_probs=41.6
Q ss_pred cCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC-CcEEEeCCCCCCccc
Q 013006 394 QMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE-APYYEISPAGHCPHD 440 (451)
Q Consensus 394 ~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~-~~~~~i~~~gH~~~~ 440 (451)
.++++|.++|.|..|++..+.....+...+|+ ..+..+|+++|..-.
T Consensus 259 ~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~ 306 (367)
T PF10142_consen 259 DRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG 306 (367)
T ss_pred HhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch
Confidence 45699999999999999999999999999997 457799999998765
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.00059 Score=54.07 Aligned_cols=44 Identities=20% Similarity=0.267 Sum_probs=42.1
Q ss_pred CCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccc
Q 013006 397 GVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHD 440 (451)
Q Consensus 397 ~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~ 440 (451)
..|+|+|.++.|+.+|.+.++.+++.+++++++.+++.||..+.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~ 77 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYA 77 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceec
Confidence 58999999999999999999999999999999999999999885
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0014 Score=66.02 Aligned_cols=136 Identities=15% Similarity=0.046 Sum_probs=83.9
Q ss_pred CCCCccceeeecCCeEEEEeecCC---CCCCCCcEEEecCCCCCh--hcHHHHH-HhhcCCceEEEEcCCCCCCCCCCCC
Q 013006 131 GAPITSCFWEWKPKFNVHYEKAGC---ENVNSPPVLFLPGFGVGS--FHYEKQL-KDLGKDYRAWAIDFLGQGMSLPDED 204 (451)
Q Consensus 131 ~~~~~~~~~~~~~g~~l~y~~~g~---~~~~~p~VlllHG~~~~~--~~~~~~~-~~L~~~~~Vi~~D~rG~G~S~~~~~ 204 (451)
+..+...+.+.+||.+|+|...+. .+ +.|++|+--|...-+ -.|.... ..|.+|...+..+.||=|.=.+.=+
T Consensus 391 ~~~veQ~~atSkDGT~IPYFiv~K~~~~d-~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH 469 (648)
T COG1505 391 NYEVEQFFATSKDGTRIPYFIVRKGAKKD-ENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWH 469 (648)
T ss_pred CceEEEEEEEcCCCccccEEEEecCCcCC-CCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHH
Confidence 334455556668999999998851 23 467776665432222 2355544 3357888888899999776532100
Q ss_pred CCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh--CCCCEEEEEeCcchHHHHHHHHhCCCccc
Q 013006 205 PTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV--IREPVYVVGNSLGGFVAVYFAACNPHLVK 282 (451)
Q Consensus 205 ~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l--~~~~v~lvGhS~GG~val~~A~~~P~~v~ 282 (451)
.. .......-.++|+++....++++- ..+++.+.|-|-||.++-....++|+.+.
T Consensus 470 ~A-----------------------a~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfg 526 (648)
T COG1505 470 QA-----------------------GMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFG 526 (648)
T ss_pred HH-----------------------HhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhC
Confidence 00 000001124455555444444432 12578999999999999888899999998
Q ss_pred eEEEeccC
Q 013006 283 GVTLLNAT 290 (451)
Q Consensus 283 ~lvl~~~~ 290 (451)
++|+--|.
T Consensus 527 A~v~evPl 534 (648)
T COG1505 527 AAVCEVPL 534 (648)
T ss_pred ceeeccch
Confidence 88877664
|
|
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.18 Score=50.63 Aligned_cols=132 Identities=21% Similarity=0.200 Sum_probs=80.7
Q ss_pred ccceeeec--CCeEEEEeecCCC-C-CCCCcEEEecCCCCChhcHHHHHHhhc-------------------CCceEEEE
Q 013006 135 TSCFWEWK--PKFNVHYEKAGCE-N-VNSPPVLFLPGFGVGSFHYEKQLKDLG-------------------KDYRAWAI 191 (451)
Q Consensus 135 ~~~~~~~~--~g~~l~y~~~g~~-~-~~~p~VlllHG~~~~~~~~~~~~~~L~-------------------~~~~Vi~~ 191 (451)
.+.+++.. .+..|+|...... + ...|.||.+.|.++.+..- .++.++. +-..++.+
T Consensus 45 ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfL 123 (454)
T KOG1282|consen 45 YSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFL 123 (454)
T ss_pred ccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEE
Confidence 34566655 6899999866542 2 2468999999998888665 4444331 12468889
Q ss_pred cCC-CCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh---CCCCEEEEEeCcch
Q 013006 192 DFL-GQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV---IREPVYVVGNSLGG 267 (451)
Q Consensus 192 D~r-G~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l---~~~~v~lvGhS~GG 267 (451)
|.| |.|.|-........ -+| ..+..+.-+.+..++++. ...+++|.|-|++|
T Consensus 124 d~PvGvGFSYs~~~~~~~---------------~~D---------~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG 179 (454)
T KOG1282|consen 124 DQPVGVGFSYSNTSSDYK---------------TGD---------DGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAG 179 (454)
T ss_pred ecCCcCCccccCCCCcCc---------------CCc---------HHHHHHHHHHHHHHHHhChhhcCCCeEEecccccc
Confidence 988 77777432211000 000 023344444455555543 34789999999999
Q ss_pred HHHHHHHHh----C-----C-CccceEEEeccCC
Q 013006 268 FVAVYFAAC----N-----P-HLVKGVTLLNATP 291 (451)
Q Consensus 268 ~val~~A~~----~-----P-~~v~~lvl~~~~~ 291 (451)
...-.+|.. + | -.++|+++=++..
T Consensus 180 ~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~t 213 (454)
T KOG1282|consen 180 HYVPALAQEILKGNKKCCKPNINLKGYAIGNGLT 213 (454)
T ss_pred eehHHHHHHHHhccccccCCcccceEEEecCccc
Confidence 777766653 2 1 2578888887753
|
|
| >KOG1551 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0052 Score=55.70 Aligned_cols=50 Identities=14% Similarity=0.163 Sum_probs=40.0
Q ss_pred EEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCC-ccccChHHHHhhh
Q 013006 400 ICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHC-PHDEVPEVCSLCL 450 (451)
Q Consensus 400 vLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~-~~~e~p~~v~~~I 450 (451)
+.++.+++|..+|......+.+..|++++..++ +||. ..+-+-+++...|
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg~eVr~~e-gGHVsayl~k~dlfRR~I 359 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPGCEVRYLE-GGHVSAYLFKQDLFRRAI 359 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCCCEEEEee-cCceeeeehhchHHHHHH
Confidence 567789999999998889999999999999998 6896 4445556655544
|
|
| >KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0019 Score=62.20 Aligned_cols=110 Identities=21% Similarity=0.230 Sum_probs=78.4
Q ss_pred CcEEEecCCCCChhcHHH---HHHhhcC--CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccc
Q 013006 160 PPVLFLPGFGVGSFHYEK---QLKDLGK--DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASE 234 (451)
Q Consensus 160 p~VlllHG~~~~~~~~~~---~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 234 (451)
-||+|--|.-++.+.+.. ++-+++. +--+|....|-+|+|.+-...+- .+.. ..
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~---------k~~~------------hl 139 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSY---------KDAR------------HL 139 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhc---------cChh------------hh
Confidence 589999999888776643 4445543 45689999999999976533210 0001 11
Q ss_pred cccCHHHHHHHHHHHHHHhCC------CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 235 LAYSVDLWQDQVCYFIKEVIR------EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 235 ~~~s~~~~a~dv~~ll~~l~~------~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
...+.++..+|...++.++.- .+|+.+|-|+|||++..+=.+||+.|.|...-+++
T Consensus 140 gyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAP 201 (492)
T KOG2183|consen 140 GYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAP 201 (492)
T ss_pred ccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCc
Confidence 125677777777777777642 47999999999999999999999988887766553
|
|
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.14 Score=49.16 Aligned_cols=45 Identities=20% Similarity=0.289 Sum_probs=36.0
Q ss_pred HHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCC-ccceEEEeccC
Q 013006 246 VCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPH-LVKGVTLLNAT 290 (451)
Q Consensus 246 v~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~-~v~~lvl~~~~ 290 (451)
+..++...+.++++||||+.|+..++.+.+..+. .++++|++++-
T Consensus 183 a~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~ 228 (310)
T PF12048_consen 183 AIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAY 228 (310)
T ss_pred HHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCC
Confidence 3344444566779999999999999999998764 59999999984
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.023 Score=53.43 Aligned_cols=98 Identities=18% Similarity=0.234 Sum_probs=62.7
Q ss_pred CCcEEEecCCCCChhc--HHHHHHhhc--CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccc
Q 013006 159 SPPVLFLPGFGVGSFH--YEKQLKDLG--KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASE 234 (451)
Q Consensus 159 ~p~VlllHG~~~~~~~--~~~~~~~L~--~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 234 (451)
..|+|+.||+|.+... ...+.+.+. .|..|.++.. |.+. ...
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~--~~s----------------------------- 70 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGV--GDS----------------------------- 70 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCc--ccc-----------------------------
Confidence 4689999999877543 333444442 2455555543 2221 110
Q ss_pred cccCHHHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhCCC--ccceEEEeccC
Q 013006 235 LAYSVDLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACNPH--LVKGVTLLNAT 290 (451)
Q Consensus 235 ~~~s~~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~P~--~v~~lvl~~~~ 290 (451)
+...+.++++.+.+-+..... +=+++||+|.||.++-.++.+.|+ .|+.+|.+++.
T Consensus 71 ~~~~~~~Qve~vce~l~~~~~l~~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 71 WLMPLTQQAEIACEKVKQMKELSQGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred ceeCHHHHHHHHHHHHhhchhhhCcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 113555555555544443211 349999999999999999999886 59999999975
|
|
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0075 Score=58.57 Aligned_cols=104 Identities=16% Similarity=0.193 Sum_probs=69.5
Q ss_pred CCCcEEEecCCCCChhcHHHHHHh------hcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKD------LGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPW 231 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~------L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 231 (451)
+.|.|+++||.|-.......++.. +-+...+++.|+.-...-. .....
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~~~SILvLDYsLt~~~~-~~~~y------------------------- 174 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLPEVSILVLDYSLTSSDE-HGHKY------------------------- 174 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcCCCeEEEEecccccccc-CCCcC-------------------------
Confidence 469999999987544433322222 2225688888886543100 01111
Q ss_pred ccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHh--CC---CccceEEEeccCC
Q 013006 232 ASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAAC--NP---HLVKGVTLLNATP 291 (451)
Q Consensus 232 ~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~--~P---~~v~~lvl~~~~~ 291 (451)
...+.+.++-...+++..+.+.++|+|-|.||.+++.+... ++ ..-+++||++|-.
T Consensus 175 ----PtQL~qlv~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv 235 (374)
T PF10340_consen 175 ----PTQLRQLVATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWV 235 (374)
T ss_pred ----chHHHHHHHHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCc
Confidence 15777888888888877888999999999999999877653 21 1358999999843
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0079 Score=58.60 Aligned_cols=35 Identities=31% Similarity=0.443 Sum_probs=31.3
Q ss_pred CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 256 EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 256 ~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
-|++++|+|.||++|...|.-.|..+.+++=-++.
T Consensus 184 lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~ 218 (403)
T PF11144_consen 184 LPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSY 218 (403)
T ss_pred CcEEEEecCcHHHHHHHHHhhCccceeEEEecCcc
Confidence 38999999999999999999999999998877664
|
|
| >COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.1 Score=48.25 Aligned_cols=102 Identities=14% Similarity=0.133 Sum_probs=74.2
Q ss_pred CCcEEEecCCCCC-hhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccccc
Q 013006 159 SPPVLFLPGFGVG-SFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAY 237 (451)
Q Consensus 159 ~p~VlllHG~~~~-~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 237 (451)
.|.||++-.+.++ +...+..++.|-....|+..||-....-..... .+
T Consensus 103 dPkvLivapmsGH~aTLLR~TV~alLp~~~vyitDW~dAr~Vp~~~G-------------------------------~F 151 (415)
T COG4553 103 DPKVLIVAPMSGHYATLLRGTVEALLPYHDVYITDWVDARMVPLEAG-------------------------------HF 151 (415)
T ss_pred CCeEEEEecccccHHHHHHHHHHHhccccceeEeeccccceeecccC-------------------------------Cc
Confidence 4677777776555 444567777887788999999876544322221 27
Q ss_pred CHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHH-----HHhCCCccceEEEeccCCC
Q 013006 238 SVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYF-----AACNPHLVKGVTLLNATPF 292 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~-----A~~~P~~v~~lvl~~~~~~ 292 (451)
+++++++-+.++++.+|.+ +++++.+.-+.-.+.. +...|..-..+++++++..
T Consensus 152 dldDYIdyvie~~~~~Gp~-~hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPID 210 (415)
T COG4553 152 DLDDYIDYVIEMINFLGPD-AHVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPID 210 (415)
T ss_pred cHHHHHHHHHHHHHHhCCC-CcEEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCccc
Confidence 9999999999999999966 8899988877554443 3346778899999987643
|
|
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.055 Score=51.00 Aligned_cols=50 Identities=18% Similarity=0.176 Sum_probs=40.4
Q ss_pred cCCC-CCEEEEeeCCCCCCChHHHHHHHHHCCC--CcEEEeCCCCCCccccCh
Q 013006 394 QMNG-VPICLIYGKEDPWVKPVWGLQVKRQVPE--APYYEISPAGHCPHDEVP 443 (451)
Q Consensus 394 ~~i~-~PvLii~G~~D~~v~~~~~~~l~~~lp~--~~~~~i~~~gH~~~~e~p 443 (451)
.++. +|+|+++|.+|..+|...+..+...... .+...+++++|......+
T Consensus 228 ~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~ 280 (299)
T COG1073 228 EKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNP 280 (299)
T ss_pred hhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCcc
Confidence 3444 8999999999999999999888887766 467788899998776443
|
|
| >COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.05 Score=50.85 Aligned_cols=36 Identities=25% Similarity=0.382 Sum_probs=33.0
Q ss_pred CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 256 EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 256 ~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
+.-+|+|-|+||.+++..+..||+++-.++..++..
T Consensus 177 ~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~ 212 (299)
T COG2382 177 DGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSF 212 (299)
T ss_pred CCcEEeccccccHHHHHHHhcCchhhceeeccCCcc
Confidence 457899999999999999999999999999999864
|
|
| >PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.0048 Score=43.75 Aligned_cols=45 Identities=20% Similarity=0.223 Sum_probs=25.8
Q ss_pred CCCCccceeeecCCeEEEEeecCCC------CCCCCcEEEecCCCCChhcH
Q 013006 131 GAPITSCFWEWKPKFNVHYEKAGCE------NVNSPPVLFLPGFGVGSFHY 175 (451)
Q Consensus 131 ~~~~~~~~~~~~~g~~l~y~~~g~~------~~~~p~VlllHG~~~~~~~~ 175 (451)
|.+.....+++.||.-|....-... .+.+|+|+|.||+..++..|
T Consensus 9 GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 9 GYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp T---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGG
T ss_pred CCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHH
Confidence 5667788888999977766544332 34678999999999999988
|
The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B. |
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.0062 Score=52.02 Aligned_cols=52 Identities=19% Similarity=0.110 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHh----CCCCEEEEEeCcchHHHHHHHHhCCC----ccceEEEeccC
Q 013006 239 VDLWQDQVCYFIKEV----IREPVYVVGNSLGGFVAVYFAACNPH----LVKGVTLLNAT 290 (451)
Q Consensus 239 ~~~~a~dv~~ll~~l----~~~~v~lvGhS~GG~val~~A~~~P~----~v~~lvl~~~~ 290 (451)
...+...+...++.. ...+++++|||+||.+|..++...+. .+..++.++++
T Consensus 7 ~~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p 66 (153)
T cd00741 7 ARSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPP 66 (153)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCC
Confidence 344455555555443 56889999999999999999887654 56777777765
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.051 Score=50.01 Aligned_cols=51 Identities=22% Similarity=0.404 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHH-h--CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 240 DLWQDQVCYFIKE-V--IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 240 ~~~a~dv~~ll~~-l--~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
+.+.++++-++++ + ..++..|+|||+||.+++.....+|+.+...++++|.
T Consensus 118 ~fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPS 171 (264)
T COG2819 118 EFLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPS 171 (264)
T ss_pred HHHHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecch
Confidence 4455666666766 2 3467899999999999999999999999999999986
|
|
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.041 Score=54.81 Aligned_cols=129 Identities=12% Similarity=0.001 Sum_probs=71.4
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCC---CChhcHHHHHHhhc-CC-ceEEEEcCCC--CCCCCCCCCCCCCCCCCCch
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFG---VGSFHYEKQLKDLG-KD-YRAWAIDFLG--QGMSLPDEDPTPRSKEGDST 215 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~---~~~~~~~~~~~~L~-~~-~~Vi~~D~rG--~G~S~~~~~~~~~~~~~~~~ 215 (451)
|.+.|....--....+.|++|+|||.+ ++......--..|+ ++ .-|+.+++|= .|.=..+.-....
T Consensus 78 DCL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~------- 150 (491)
T COG2272 78 DCLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTED------- 150 (491)
T ss_pred cceeEEeeccCCCCCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccc-------
Confidence 455666554441122459999999963 33333222234554 34 7778888771 2221111000000
Q ss_pred hhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCC--CEEEEEeCcchHHHHHHHHh--CCCccceEEEeccCC
Q 013006 216 EEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIRE--PVYVVGNSLGGFVAVYFAAC--NPHLVKGVTLLNATP 291 (451)
Q Consensus 216 ~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~--~v~lvGhS~GG~val~~A~~--~P~~v~~lvl~~~~~ 291 (451)
+. ..+....+.-.-.+.+++-|++.|.+ .|.|+|+|-|++.++.+.+. ....++++|+.++..
T Consensus 151 -~~------------~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~ 217 (491)
T COG2272 151 -AF------------ASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAA 217 (491)
T ss_pred -cc------------cccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCC
Confidence 00 00001123333445666778888774 59999999999988877654 234788888888753
|
|
| >KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.065 Score=54.77 Aligned_cols=128 Identities=16% Similarity=0.152 Sum_probs=80.5
Q ss_pred CCccceeeecCCeEEE----EeecCCCCCCCCcEEEecCCCCChhcHHHHH----Hhh-cCCceEEEEcCCCCCCCCCCC
Q 013006 133 PITSCFWEWKPKFNVH----YEKAGCENVNSPPVLFLPGFGVGSFHYEKQL----KDL-GKDYRAWAIDFLGQGMSLPDE 203 (451)
Q Consensus 133 ~~~~~~~~~~~g~~l~----y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~----~~L-~~~~~Vi~~D~rG~G~S~~~~ 203 (451)
++...++..+||..+. |...-..+.+.|.+|..+| +-..+..+.+ ..| .+|+-....|.||=|.=..
T Consensus 440 ~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYG--ay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~-- 515 (712)
T KOG2237|consen 440 VVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYG--AYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGE-- 515 (712)
T ss_pred EEEEEEEecCCCCccceEEEEechhhhcCCCceEEEEec--ccceeeccccccceeEEEecceEEEEEeeccCccccc--
Confidence 3444555567886543 3222222224565555555 3333322221 122 4567777779999775431
Q ss_pred CCCCCCCCCCchhhhhccccCCCCCCccccc-----cccCHHHHHHHHHHHHHHh--CCCCEEEEEeCcchHHHHHHHHh
Q 013006 204 DPTPRSKEGDSTEEKNFLWGFGDKAQPWASE-----LAYSVDLWQDQVCYFIKEV--IREPVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~-----~~~s~~~~a~dv~~ll~~l--~~~~v~lvGhS~GG~val~~A~~ 276 (451)
.|++. ..-+++|++..++.+++.- ..++..+.|.|.||.++..++.+
T Consensus 516 --------------------------~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~ 569 (712)
T KOG2237|consen 516 --------------------------QWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQ 569 (712)
T ss_pred --------------------------chhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhcc
Confidence 11111 1257888888888887653 34689999999999999999999
Q ss_pred CCCccceEEEeccC
Q 013006 277 NPHLVKGVTLLNAT 290 (451)
Q Consensus 277 ~P~~v~~lvl~~~~ 290 (451)
+|+++.++|+--|.
T Consensus 570 rPdLF~avia~Vpf 583 (712)
T KOG2237|consen 570 RPDLFGAVIAKVPF 583 (712)
T ss_pred CchHhhhhhhcCcc
Confidence 99999999987664
|
|
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.015 Score=55.61 Aligned_cols=35 Identities=23% Similarity=0.367 Sum_probs=32.6
Q ss_pred CEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 257 PVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 257 ~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
...++||||||.=|+.+|++||++++.+..+++..
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~ 187 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPDRFKSASSFSGIL 187 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcchhceeccccccc
Confidence 68899999999999999999999999999998753
|
|
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.094 Score=45.71 Aligned_cols=53 Identities=21% Similarity=0.192 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHhC-----CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 239 VDLWQDQVCYFIKEVI-----REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 239 ~~~~a~dv~~ll~~l~-----~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
-+.-+.++..|++.|. ...+.++|||+|+.++-..+...+..+..+|+++++.
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG 144 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPG 144 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCC
Confidence 3455667777776663 2468999999999999988877677899999999764
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.28 Score=47.41 Aligned_cols=53 Identities=17% Similarity=0.167 Sum_probs=39.5
Q ss_pred CCCEEEEeeCCCCCCChHHHHHHHHHCC------------------------C-CcEEEeCCCCCCccccChHHHHhhh
Q 013006 397 GVPICLIYGKEDPWVKPVWGLQVKRQVP------------------------E-APYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 397 ~~PvLii~G~~D~~v~~~~~~~l~~~lp------------------------~-~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
.++||+..|+.|.+++....+++.+.+. + ..+.++.+|||.++ .+|+...+.|
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~ 310 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMF 310 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHH
Confidence 5899999999999999766666554432 1 45566779999997 5898876543
|
|
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.09 Score=54.08 Aligned_cols=54 Identities=19% Similarity=0.251 Sum_probs=47.0
Q ss_pred cCHHHHHHHHHHHHHHhC--CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 237 YSVDLWQDQVCYFIKEVI--REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 237 ~s~~~~a~dv~~ll~~l~--~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
-|+.|+++....+++.-- .+.++++|-|.||+++-..+.+.|++++++|+--|.
T Consensus 506 NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPF 561 (682)
T COG1770 506 NTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPF 561 (682)
T ss_pred ccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCc
Confidence 589999999988887642 357999999999999999999999999999988764
|
|
| >COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.038 Score=55.14 Aligned_cols=122 Identities=22% Similarity=0.162 Sum_probs=78.9
Q ss_pred EEEeecCCC-CCCCCcEEEecCCCCChhcHHHHHHh----h---------------cCCceEEEEc-CCCCCCCCCCCCC
Q 013006 147 VHYEKAGCE-NVNSPPVLFLPGFGVGSFHYEKQLKD----L---------------GKDYRAWAID-FLGQGMSLPDEDP 205 (451)
Q Consensus 147 l~y~~~g~~-~~~~p~VlllHG~~~~~~~~~~~~~~----L---------------~~~~~Vi~~D-~rG~G~S~~~~~~ 205 (451)
.+|...++. ..++|.|+.+.|.++++..|-.+... + -..-.++.+| .-|.|.|....+
T Consensus 88 ffy~fe~~ndp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~- 166 (498)
T COG2939 88 FFYTFESPNDPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGD- 166 (498)
T ss_pred EEEEecCCCCCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCccccccc-
Confidence 344444432 23578999999999999888665321 1 1124799999 669999974221
Q ss_pred CCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhCCC---c
Q 013006 206 TPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACNPH---L 280 (451)
Q Consensus 206 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~P~---~ 280 (451)
|..-.+|+++. +++.+.+-+.+.+.++.. .+.+|+|-|+||.-+-.+|...-+ .
T Consensus 167 ----------e~~~d~~~~~~-----------D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~ 225 (498)
T COG2939 167 ----------EKKKDFEGAGK-----------DVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIA 225 (498)
T ss_pred ----------ccccchhccch-----------hHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccc
Confidence 23444555543 445555555555555544 499999999999998888875433 3
Q ss_pred cceEEEeccC
Q 013006 281 VKGVTLLNAT 290 (451)
Q Consensus 281 v~~lvl~~~~ 290 (451)
.++++++.+.
T Consensus 226 ~~~~~nlssv 235 (498)
T COG2939 226 LNGNVNLSSV 235 (498)
T ss_pred cCCceEeeee
Confidence 6777777764
|
|
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.0098 Score=49.76 Aligned_cols=38 Identities=26% Similarity=0.292 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHh
Q 013006 239 VDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 239 ~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~ 276 (451)
.+.+.+.+..+++.....++++.|||+||.+|..++..
T Consensus 47 ~~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 47 YDQILDALKELVEKYPDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHh
Confidence 34556677776666666789999999999999988875
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.016 Score=59.07 Aligned_cols=51 Identities=20% Similarity=0.130 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHh----CCCCEEEEEeCcchHHHHHHHHhCC---------------CccceEEEeccC
Q 013006 240 DLWQDQVCYFIKEV----IREPVYVVGNSLGGFVAVYFAACNP---------------HLVKGVTLLNAT 290 (451)
Q Consensus 240 ~~~a~dv~~ll~~l----~~~~v~lvGhS~GG~val~~A~~~P---------------~~v~~lvl~~~~ 290 (451)
+.+-..++.+|+.. +.+||+||||||||.+++.+..... ..|+++|.++++
T Consensus 193 d~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp 262 (642)
T PLN02517 193 DQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGP 262 (642)
T ss_pred hHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccc
Confidence 45555566666543 3589999999999999999876321 258999999874
|
|
| >PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.035 Score=53.96 Aligned_cols=102 Identities=22% Similarity=0.323 Sum_probs=79.2
Q ss_pred CCCcEEEecCCCCChhcHH-HHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYE-KQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELA 236 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~-~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 236 (451)
++|+|+..-|++....-.+ .....| +-+-+.+.+|-+|.|.+.+. .|..
T Consensus 62 drPtV~~T~GY~~~~~p~r~Ept~Ll--d~NQl~vEhRfF~~SrP~p~----------------DW~~------------ 111 (448)
T PF05576_consen 62 DRPTVLYTEGYNVSTSPRRSEPTQLL--DGNQLSVEHRFFGPSRPEPA----------------DWSY------------ 111 (448)
T ss_pred CCCeEEEecCcccccCccccchhHhh--ccceEEEEEeeccCCCCCCC----------------Cccc------------
Confidence 6799999999988654332 223333 35578899999999975432 2433
Q ss_pred cCHHHHHHHHHHHHHHhC---CCCEEEEEeCcchHHHHHHHHhCCCccceEEEecc
Q 013006 237 YSVDLWQDQVCYFIKEVI---REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNA 289 (451)
Q Consensus 237 ~s~~~~a~dv~~ll~~l~---~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~ 289 (451)
.|+.+-++|.+.+++.+. ..+.+--|-|=||++++.+=.-||+.|.+.|---+
T Consensus 112 Lti~QAA~D~Hri~~A~K~iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVA 167 (448)
T PF05576_consen 112 LTIWQAASDQHRIVQAFKPIYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVA 167 (448)
T ss_pred ccHhHhhHHHHHHHHHHHhhccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeec
Confidence 799999999999998874 36788899999999999988889999999887654
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ]. |
| >PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.018 Score=46.14 Aligned_cols=42 Identities=19% Similarity=0.344 Sum_probs=27.1
Q ss_pred eeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHH
Q 013006 138 FWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQL 179 (451)
Q Consensus 138 ~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~ 179 (451)
|.+.-+|+.||+....+.+++..||||+||++++-..|..++
T Consensus 71 f~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~Ef~~vI 112 (112)
T PF06441_consen 71 FKTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLEFLKVI 112 (112)
T ss_dssp EEEEETTEEEEEEEE--S-TT-EEEEEE--SS--GGGGHHHH
T ss_pred eeEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccHHhHHhhC
Confidence 444457999999988877778899999999999887776653
|
Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A. |
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.15 Score=55.66 Aligned_cols=96 Identities=20% Similarity=0.245 Sum_probs=67.8
Q ss_pred CCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccc
Q 013006 157 VNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELA 236 (451)
Q Consensus 157 ~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 236 (451)
.+.|+++|+|.+-+.......++..|. .|.||.-.-...|.
T Consensus 2121 se~~~~Ffv~pIEG~tt~l~~la~rle---------~PaYglQ~T~~vP~------------------------------ 2161 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTALESLASRLE---------IPAYGLQCTEAVPL------------------------------ 2161 (2376)
T ss_pred ccCCceEEEeccccchHHHHHHHhhcC---------CcchhhhccccCCc------------------------------
Confidence 357899999999887777777776653 34455322111111
Q ss_pred cCHHHHHHHHHHHHHHhCC-CCEEEEEeCcchHHHHHHHHhC--CCccceEEEeccCC
Q 013006 237 YSVDLWQDQVCYFIKEVIR-EPVYVVGNSLGGFVAVYFAACN--PHLVKGVTLLNATP 291 (451)
Q Consensus 237 ~s~~~~a~dv~~ll~~l~~-~~v~lvGhS~GG~val~~A~~~--P~~v~~lvl~~~~~ 291 (451)
-++++.+.....-++.+.. .|..++|+|+|+.++..+|... .+....+|+++..|
T Consensus 2162 dSies~A~~yirqirkvQP~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2162 DSIESLAAYYIRQIRKVQPEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred chHHHHHHHHHHHHHhcCCCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 4777777777666666654 6899999999999999999764 33466799999875
|
|
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.031 Score=50.91 Aligned_cols=49 Identities=24% Similarity=0.230 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhC----CCccceEEEeccCC
Q 013006 242 WQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACN----PHLVKGVTLLNATP 291 (451)
Q Consensus 242 ~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~----P~~v~~lvl~~~~~ 291 (451)
.++-+..+++... +++++.|||.||.+|...|... .++|.++...+++.
T Consensus 71 A~~yl~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 71 ALAYLKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 3344444455444 3599999999999999999874 35899999999864
|
|
| >KOG3967 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.13 Score=45.27 Aligned_cols=43 Identities=23% Similarity=0.359 Sum_probs=34.7
Q ss_pred HHHHHhCCCCEEEEEeCcchHHHHHHHHhCCC--ccceEEEeccC
Q 013006 248 YFIKEVIREPVYVVGNSLGGFVAVYFAACNPH--LVKGVTLLNAT 290 (451)
Q Consensus 248 ~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~--~v~~lvl~~~~ 290 (451)
.++.-...+.+.+|.||+||...+.+..++|+ +|-++.+.+++
T Consensus 182 ~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 182 NIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred HHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 34444456889999999999999999999985 67788887765
|
|
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.066 Score=55.64 Aligned_cols=121 Identities=14% Similarity=0.088 Sum_probs=63.1
Q ss_pred CCeEEEEeecCCCCC--CCCcEEEecCCCC---Ch--hcHHHHHHhhcCCceEEEEcCC----CCCCCCCCCCCCCCCCC
Q 013006 143 PKFNVHYEKAGCENV--NSPPVLFLPGFGV---GS--FHYEKQLKDLGKDYRAWAIDFL----GQGMSLPDEDPTPRSKE 211 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~--~~p~VlllHG~~~---~~--~~~~~~~~~L~~~~~Vi~~D~r----G~G~S~~~~~~~~~~~~ 211 (451)
|=+.|....-..... +.|++|+|||.+. +. ..+....-...++.=|+.+++| |+-.+.....+
T Consensus 107 DCL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~------ 180 (535)
T PF00135_consen 107 DCLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAP------ 180 (535)
T ss_dssp ---EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSH------
T ss_pred hHHHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccC------
Confidence 335555554433222 3599999999642 22 2233222222457889999988 44333211110
Q ss_pred CCchhhhhccccCCCCCCccccccccCHHHHHHHH---HHHHHHhCC--CCEEEEEeCcchHHHHHHHHhC--CCccceE
Q 013006 212 GDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQV---CYFIKEVIR--EPVYVVGNSLGGFVAVYFAACN--PHLVKGV 284 (451)
Q Consensus 212 ~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv---~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~--P~~v~~l 284 (451)
...+-+.|+...+ ++-|...|. ++|.|+|||-||..+..+...- ..+++++
T Consensus 181 ----------------------~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~ra 238 (535)
T PF00135_consen 181 ----------------------SGNYGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRA 238 (535)
T ss_dssp ----------------------BSTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEE
T ss_pred ----------------------chhhhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccc
Confidence 0014455555444 444445555 5799999999998887666652 3589999
Q ss_pred EEeccCC
Q 013006 285 TLLNATP 291 (451)
Q Consensus 285 vl~~~~~ 291 (451)
|+.++.+
T Consensus 239 I~~SGs~ 245 (535)
T PF00135_consen 239 ILQSGSA 245 (535)
T ss_dssp EEES--T
T ss_pred ccccccc
Confidence 9999864
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.085 Score=52.48 Aligned_cols=109 Identities=20% Similarity=0.195 Sum_probs=79.3
Q ss_pred CCCcEEEecCCCCChhcHHH----HHHhhcC--CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcc
Q 013006 158 NSPPVLFLPGFGVGSFHYEK----QLKDLGK--DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPW 231 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~----~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 231 (451)
.+|..|+|-|=+.-...|.. ....+++ +-.|+...+|-+|.|.+......
T Consensus 85 ~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st------------------------ 140 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLST------------------------ 140 (514)
T ss_pred CCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcc------------------------
Confidence 56777777775544444522 2223333 57899999999999965544321
Q ss_pred ccccccCHHHHHHHHHHHHHHhCC-------CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 232 ASELAYSVDLWQDQVCYFIKEVIR-------EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 232 ~~~~~~s~~~~a~dv~~ll~~l~~-------~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
......+..+...|+..+|+++.. .|.+.+|.|+-|.++.-+=.++|+.+.+-|.-+++
T Consensus 141 ~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSap 206 (514)
T KOG2182|consen 141 SNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAP 206 (514)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccc
Confidence 112236889999999999998743 28999999999999999999999999998877764
|
|
| >COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.1 Score=50.56 Aligned_cols=84 Identities=18% Similarity=0.085 Sum_probs=60.3
Q ss_pred CcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccC
Q 013006 160 PPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYS 238 (451)
Q Consensus 160 p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s 238 (451)
..-||..|=|+-.+.=..+...|++ |+.|+.+|-.=|=.|. .+
T Consensus 261 ~~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~------------------------------------rt 304 (456)
T COG3946 261 TVAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSE------------------------------------RT 304 (456)
T ss_pred eEEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhcc------------------------------------CC
Confidence 3456666655533333455667754 7999999977665654 47
Q ss_pred HHHHHHHHHHHHHHh----CCCCEEEEEeCcchHHHHHHHHhCCC
Q 013006 239 VDLWQDQVCYFIKEV----IREPVYVVGNSLGGFVAVYFAACNPH 279 (451)
Q Consensus 239 ~~~~a~dv~~ll~~l----~~~~v~lvGhS~GG~val~~A~~~P~ 279 (451)
.+..++|+..+++.. +..++.|+|+|+|+=+.-....+.|.
T Consensus 305 Pe~~a~Dl~r~i~~y~~~w~~~~~~liGySfGADvlP~~~n~L~~ 349 (456)
T COG3946 305 PEQIAADLSRLIRFYARRWGAKRVLLIGYSFGADVLPFAYNRLPP 349 (456)
T ss_pred HHHHHHHHHHHHHHHHHhhCcceEEEEeecccchhhHHHHHhCCH
Confidence 788888888888776 56789999999999887766666553
|
|
| >KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.043 Score=54.24 Aligned_cols=50 Identities=20% Similarity=0.297 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHH----HhCCCCEEEEEeCcchHHHHHHHHhCCC--------ccceEEEecc
Q 013006 240 DLWQDQVCYFIK----EVIREPVYVVGNSLGGFVAVYFAACNPH--------LVKGVTLLNA 289 (451)
Q Consensus 240 ~~~a~dv~~ll~----~l~~~~v~lvGhS~GG~val~~A~~~P~--------~v~~lvl~~~ 289 (451)
+++...++..+| .-+.+|++||+||||+.+.+++...+++ .+++++-+++
T Consensus 162 d~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~ 223 (473)
T KOG2369|consen 162 DQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGA 223 (473)
T ss_pred HHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCc
Confidence 344444554444 4466999999999999999999998876 4677776665
|
|
| >cd00519 Lipase_3 Lipase (class 3) | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.04 Score=50.50 Aligned_cols=27 Identities=33% Similarity=0.424 Sum_probs=21.4
Q ss_pred HHHhCCCCEEEEEeCcchHHHHHHHHh
Q 013006 250 IKEVIREPVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 250 l~~l~~~~v~lvGhS~GG~val~~A~~ 276 (451)
+++....++++.|||+||.+|..++..
T Consensus 122 ~~~~p~~~i~vtGHSLGGaiA~l~a~~ 148 (229)
T cd00519 122 LKQYPDYKIIVTGHSLGGALASLLALD 148 (229)
T ss_pred HhhCCCceEEEEccCHHHHHHHHHHHH
Confidence 333345689999999999999988875
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PLN02162 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.40 E-value=0.09 Score=52.33 Aligned_cols=38 Identities=21% Similarity=0.206 Sum_probs=30.0
Q ss_pred CHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHH
Q 013006 238 SVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAA 275 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~ 275 (451)
....+.+.+..++++....++++.|||+||.+|..+|+
T Consensus 260 ay~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 260 AYYTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred hHHHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 34556667777777766678999999999999998765
|
|
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=94.27 E-value=0.25 Score=50.44 Aligned_cols=128 Identities=18% Similarity=0.169 Sum_probs=79.9
Q ss_pred EEEEeecCCCCCCCCcEEEecCCCCCh-hcHHH----HHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhc
Q 013006 146 NVHYEKAGCENVNSPPVLFLPGFGVGS-FHYEK----QLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNF 220 (451)
Q Consensus 146 ~l~y~~~g~~~~~~p~VlllHG~~~~~-~~~~~----~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~ 220 (451)
.|.++.+=|.+=++ -++.+-|.+... -.+.. +...|++||.++.-|- ||..+.... ..
T Consensus 16 ~i~fev~LP~~WNg-R~~~~GgGG~~G~i~~~~~~~~~~~~~~~G~A~~~TD~-Gh~~~~~~~---------------~~ 78 (474)
T PF07519_consen 16 NIRFEVWLPDNWNG-RFLQVGGGGFAGGINYADGKASMATALARGYATASTDS-GHQGSAGSD---------------DA 78 (474)
T ss_pred eEEEEEECChhhcc-CeEEECCCeeeCcccccccccccchhhhcCeEEEEecC-CCCCCcccc---------------cc
Confidence 56666665542223 355554433222 22333 4566888999999995 665543210 01
Q ss_pred cccCCCCCCccccccccCHHHHHHHHHHHHHHh---CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCC
Q 013006 221 LWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV---IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPF 292 (451)
Q Consensus 221 ~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l---~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~ 292 (451)
.|+ .+.+.+.+....++.+++..-+++++.. ..+.-+..|.|.||.-++..|.+||+.+.+++.-+|+..
T Consensus 79 ~~~--~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~ 151 (474)
T PF07519_consen 79 SFG--NNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAIN 151 (474)
T ss_pred ccc--CCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHH
Confidence 122 1222222222256666777777777765 335688999999999999999999999999999998743
|
It also includes several bacterial homologues of unknown function. |
| >PLN00413 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=93.93 E-value=0.13 Score=51.25 Aligned_cols=38 Identities=21% Similarity=0.273 Sum_probs=31.5
Q ss_pred CHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHH
Q 013006 238 SVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAA 275 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~ 275 (451)
....+.+.+..+++.....++++.|||+||++|..+|.
T Consensus 266 ayy~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 266 AYYTILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred hHHHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 34466778888888877788999999999999998875
|
|
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=93.92 E-value=0.082 Score=52.10 Aligned_cols=36 Identities=19% Similarity=0.203 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHhCCCC--EEEEEeCcchHHHHHHHHh
Q 013006 241 LWQDQVCYFIKEVIREP--VYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 241 ~~a~dv~~ll~~l~~~~--v~lvGhS~GG~val~~A~~ 276 (451)
++...|..+++.....+ +++.|||+||.+|+.+|..
T Consensus 211 qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 211 QLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 34445555555554444 9999999999999988854
|
|
| >PLN02571 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=93.90 E-value=0.076 Score=52.36 Aligned_cols=37 Identities=24% Similarity=0.307 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHhCCC--CEEEEEeCcchHHHHHHHHh
Q 013006 240 DLWQDQVCYFIKEVIRE--PVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~~~--~v~lvGhS~GG~val~~A~~ 276 (451)
+++.++|..+++....+ ++++.||||||.+|+..|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 56677788888776543 68999999999999988864
|
|
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=93.63 E-value=0.13 Score=45.81 Aligned_cols=41 Identities=12% Similarity=0.211 Sum_probs=35.3
Q ss_pred cCHHHHHHHHHHHHHHhCC-CCEEEEEeCcchHHHHHHHHhC
Q 013006 237 YSVDLWQDQVCYFIKEVIR-EPVYVVGNSLGGFVAVYFAACN 277 (451)
Q Consensus 237 ~s~~~~a~dv~~ll~~l~~-~~v~lvGhS~GG~val~~A~~~ 277 (451)
....|..+....+|++.+. ++++|+|||.|+.+.+++...+
T Consensus 75 ~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 75 LAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 5678888888889988854 6999999999999999998764
|
|
| >COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.35 E-value=0.11 Score=49.73 Aligned_cols=46 Identities=11% Similarity=0.079 Sum_probs=39.8
Q ss_pred cCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCc-EEEeCCCCCCcc
Q 013006 394 QMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAP-YYEISPAGHCPH 439 (451)
Q Consensus 394 ~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~-~~~i~~~gH~~~ 439 (451)
.++..|-.++.+..|.+.++..+......+|+.+ +..+|+..|...
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~ 372 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLI 372 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhh
Confidence 3568899999999999999999999999999854 778999999754
|
|
| >PLN02408 phospholipase A1 | Back alignment and domain information |
|---|
Probab=93.13 E-value=0.13 Score=50.02 Aligned_cols=37 Identities=19% Similarity=0.326 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHhCCC--CEEEEEeCcchHHHHHHHHh
Q 013006 240 DLWQDQVCYFIKEVIRE--PVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~~~--~v~lvGhS~GG~val~~A~~ 276 (451)
+++.+.|..+++....+ ++++.|||+||.+|..+|..
T Consensus 182 ~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 182 EMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 34556677777776544 58999999999999988765
|
|
| >COG2830 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=93.04 E-value=1 Score=38.02 Aligned_cols=78 Identities=17% Similarity=0.260 Sum_probs=54.0
Q ss_pred CcEEEecCCCCChhcHHHHHHhhcCCceE-EEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccC
Q 013006 160 PPVLFLPGFGVGSFHYEKQLKDLGKDYRA-WAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYS 238 (451)
Q Consensus 160 p~VlllHG~~~~~~~~~~~~~~L~~~~~V-i~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s 238 (451)
..||+.-|++..+.....++ |.+++++ +++|+...... ++
T Consensus 12 ~LIvyFaGwgtpps~v~HLi--lpeN~dl~lcYDY~dl~ld-------------------------------------fD 52 (214)
T COG2830 12 HLIVYFAGWGTPPSAVNHLI--LPENHDLLLCYDYQDLNLD-------------------------------------FD 52 (214)
T ss_pred EEEEEEecCCCCHHHHhhcc--CCCCCcEEEEeehhhcCcc-------------------------------------cc
Confidence 38899999999887765543 2455654 78898754322 22
Q ss_pred HHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 239 VDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 239 ~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
+.. .+.+-+|++|||-.+|-++..-. ++++.+.++++.
T Consensus 53 fsA-------------y~hirlvAwSMGVwvAeR~lqg~--~lksatAiNGTg 90 (214)
T COG2830 53 FSA-------------YRHIRLVAWSMGVWVAERVLQGI--RLKSATAINGTG 90 (214)
T ss_pred hhh-------------hhhhhhhhhhHHHHHHHHHHhhc--cccceeeecCCC
Confidence 211 14567999999999999887766 478888888764
|
|
| >COG4947 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=92.86 E-value=0.13 Score=43.69 Aligned_cols=48 Identities=29% Similarity=0.445 Sum_probs=39.1
Q ss_pred HHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 243 QDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 243 a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
.+--+.++++.-....++-|.||||..|..+.-+||+.+.++|.++..
T Consensus 88 ~AyerYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGv 135 (227)
T COG4947 88 RAYERYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGV 135 (227)
T ss_pred HHHHHHHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecce
Confidence 334445566655566778899999999999999999999999999974
|
|
| >PLN02934 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=92.44 E-value=0.18 Score=50.72 Aligned_cols=38 Identities=26% Similarity=0.384 Sum_probs=31.5
Q ss_pred CHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHH
Q 013006 238 SVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAA 275 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~ 275 (451)
..+.+...+..+++.....++++.|||+||.+|..+|.
T Consensus 303 Ay~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 303 AYYAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 44567777888888877789999999999999998875
|
|
| >PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids [] | Back alignment and domain information |
|---|
Probab=92.27 E-value=0.22 Score=43.72 Aligned_cols=53 Identities=19% Similarity=0.169 Sum_probs=37.2
Q ss_pred CHHHHHHHHHHHHHH----hCCCCEEEEEeCcchHHHHHHHHh--C----CCccceEEEeccC
Q 013006 238 SVDLWQDQVCYFIKE----VIREPVYVVGNSLGGFVAVYFAAC--N----PHLVKGVTLLNAT 290 (451)
Q Consensus 238 s~~~~a~dv~~ll~~----l~~~~v~lvGhS~GG~val~~A~~--~----P~~v~~lvl~~~~ 290 (451)
+...=++++..+++. -.-.+++|+|+|.|+.++..++.. . .++|.++++++-+
T Consensus 59 S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP 121 (179)
T PF01083_consen 59 SVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDP 121 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-T
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCC
Confidence 344444444444443 345689999999999999998877 2 3579999999864
|
Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A .... |
| >PLN02324 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=92.18 E-value=0.19 Score=49.50 Aligned_cols=37 Identities=24% Similarity=0.289 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHhCCC--CEEEEEeCcchHHHHHHHHh
Q 013006 240 DLWQDQVCYFIKEVIRE--PVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~~~--~v~lvGhS~GG~val~~A~~ 276 (451)
+++.+.|..+++....+ +|++.|||+||.+|+..|..
T Consensus 197 eqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 197 EQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 34555677777766543 59999999999999988864
|
|
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=91.92 E-value=1.6 Score=39.98 Aligned_cols=34 Identities=29% Similarity=0.362 Sum_probs=27.5
Q ss_pred CEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 257 PVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 257 ~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
|++-||||||+-+-+.+...++..-++-++++-.
T Consensus 91 P~~~vGHSlGcklhlLi~s~~~~~r~gniliSFN 124 (250)
T PF07082_consen 91 PVYGVGHSLGCKLHLLIGSLFDVERAGNILISFN 124 (250)
T ss_pred CeeeeecccchHHHHHHhhhccCcccceEEEecC
Confidence 6788999999999888888776555777888754
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >PLN02802 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=91.62 E-value=0.23 Score=49.98 Aligned_cols=37 Identities=24% Similarity=0.299 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHhCCC--CEEEEEeCcchHHHHHHHHh
Q 013006 240 DLWQDQVCYFIKEVIRE--PVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~~~--~v~lvGhS~GG~val~~A~~ 276 (451)
+++.+.|..+++....+ +|++.|||+||.+|+..|..
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 34556677777766543 68999999999999987764
|
|
| >PLN02310 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=91.40 E-value=0.25 Score=48.62 Aligned_cols=37 Identities=24% Similarity=0.223 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHhC----CCCEEEEEeCcchHHHHHHHHh
Q 013006 240 DLWQDQVCYFIKEVI----REPVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~----~~~v~lvGhS~GG~val~~A~~ 276 (451)
+++.+.|..+++.+. ..++++.|||+||.+|+..|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 456667777777663 1369999999999999988753
|
|
| >KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.21 E-value=0.32 Score=47.41 Aligned_cols=89 Identities=18% Similarity=0.154 Sum_probs=50.1
Q ss_pred CCcEEEecCCCC-ChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccccc
Q 013006 159 SPPVLFLPGFGV-GSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAY 237 (451)
Q Consensus 159 ~p~VlllHG~~~-~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 237 (451)
.-.||+.||+-+ +...|...+....+.+.=..+..+|+-..-.... .... +
T Consensus 80 ~HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~------------~Gv~----------------~ 131 (405)
T KOG4372|consen 80 KHLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKMNNMCQTF------------DGVD----------------V 131 (405)
T ss_pred ceEEEeccccccccHHHHHHHHHhhhcCCCcceEeeeccccchhhcc------------ccce----------------e
Confidence 457999999976 6677777776665432221333344322211110 0000 1
Q ss_pred CHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHH
Q 013006 238 SVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAA 275 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~ 275 (451)
-=..+++++.+.+....++++..||||+||.++-.+..
T Consensus 132 lG~Rla~~~~e~~~~~si~kISfvghSLGGLvar~AIg 169 (405)
T KOG4372|consen 132 LGERLAEEVKETLYDYSIEKISFVGHSLGGLVARYAIG 169 (405)
T ss_pred eecccHHHHhhhhhccccceeeeeeeecCCeeeeEEEE
Confidence 11233445555555556789999999999998765443
|
|
| >PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins | Back alignment and domain information |
|---|
Probab=91.05 E-value=0.4 Score=46.44 Aligned_cols=37 Identities=38% Similarity=0.464 Sum_probs=29.5
Q ss_pred CCCCEEEEEeCcchHHHHHHHHhCCC-----ccceEEEeccC
Q 013006 254 IREPVYVVGNSLGGFVAVYFAACNPH-----LVKGVTLLNAT 290 (451)
Q Consensus 254 ~~~~v~lvGhS~GG~val~~A~~~P~-----~v~~lvl~~~~ 290 (451)
+.+|+.|||||+|+.+.........+ .|+.+++++++
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gap 259 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAP 259 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCC
Confidence 56789999999999998876654433 48999999874
|
|
| >PLN02753 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=91.04 E-value=0.28 Score=49.58 Aligned_cols=36 Identities=28% Similarity=0.308 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHhCC-----CCEEEEEeCcchHHHHHHHH
Q 013006 240 DLWQDQVCYFIKEVIR-----EPVYVVGNSLGGFVAVYFAA 275 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~~-----~~v~lvGhS~GG~val~~A~ 275 (451)
+++.+.|..+++.... -+|++.|||+||.+|+..|.
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 4455666677766543 47999999999999998875
|
|
| >PLN02719 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=90.16 E-value=0.37 Score=48.61 Aligned_cols=37 Identities=27% Similarity=0.246 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHhCC-----CCEEEEEeCcchHHHHHHHHh
Q 013006 240 DLWQDQVCYFIKEVIR-----EPVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~~-----~~v~lvGhS~GG~val~~A~~ 276 (451)
+++.+.|..+++.... .++++.|||+||.+|+..|..
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 3455666666666542 369999999999999988753
|
|
| >PLN03037 lipase class 3 family protein; Provisional | Back alignment and domain information |
|---|
Probab=90.08 E-value=0.38 Score=48.64 Aligned_cols=37 Identities=22% Similarity=0.244 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHhCC----CCEEEEEeCcchHHHHHHHHh
Q 013006 240 DLWQDQVCYFIKEVIR----EPVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~~----~~v~lvGhS~GG~val~~A~~ 276 (451)
+++.++|..+++.+.. .++++.|||+||.+|+..|..
T Consensus 298 eQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 4456777777776642 369999999999999988753
|
|
| >PLN02761 lipase class 3 family protein | Back alignment and domain information |
|---|
Probab=90.06 E-value=0.4 Score=48.54 Aligned_cols=36 Identities=22% Similarity=0.172 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHhC------CCCEEEEEeCcchHHHHHHHH
Q 013006 240 DLWQDQVCYFIKEVI------REPVYVVGNSLGGFVAVYFAA 275 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~------~~~v~lvGhS~GG~val~~A~ 275 (451)
+++.+.|..+++... .-++++.|||+||.+|+..|.
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 445566777777662 136999999999999998875
|
|
| >KOG1516 consensus Carboxylesterase and related proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.45 E-value=3 Score=43.60 Aligned_cols=56 Identities=11% Similarity=0.006 Sum_probs=37.4
Q ss_pred cCHHHHHHHHH---HHHHHhCC--CCEEEEEeCcchHHHHHHHHh--CCCccceEEEeccCCC
Q 013006 237 YSVDLWQDQVC---YFIKEVIR--EPVYVVGNSLGGFVAVYFAAC--NPHLVKGVTLLNATPF 292 (451)
Q Consensus 237 ~s~~~~a~dv~---~ll~~l~~--~~v~lvGhS~GG~val~~A~~--~P~~v~~lvl~~~~~~ 292 (451)
+.+.|+...+. .-|...+. ++|.|+|||.||..+..+... ...++.++|.+++...
T Consensus 171 ~gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~ 233 (545)
T KOG1516|consen 171 LGLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNAL 233 (545)
T ss_pred ccHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccccc
Confidence 34445554444 44444554 679999999999998776653 2257888888887654
|
|
| >PLN02847 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=87.95 E-value=0.76 Score=47.23 Aligned_cols=27 Identities=30% Similarity=0.368 Sum_probs=21.0
Q ss_pred HHHhCCCCEEEEEeCcchHHHHHHHHh
Q 013006 250 IKEVIREPVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 250 l~~l~~~~v~lvGhS~GG~val~~A~~ 276 (451)
++....-+++++|||+||.+|..++..
T Consensus 245 l~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 245 LDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 333344589999999999999888765
|
|
| >KOG4569 consensus Predicted lipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.09 E-value=0.77 Score=44.67 Aligned_cols=37 Identities=24% Similarity=0.259 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHh
Q 013006 240 DLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~ 276 (451)
..+.+++..+++....-++.+-|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 5777888888888887789999999999999988764
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 451 | ||||
| 3p2m_A | 330 | Crystal Structure Of A Novel Esterase Rv0045c From | 6e-04 |
| >pdb|3P2M|A Chain A, Crystal Structure Of A Novel Esterase Rv0045c From Mycobacterium Tuberculosis Length = 330 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 451 | |||
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 3e-44 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 3e-40 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 2e-37 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 1e-35 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 7e-34 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 6e-33 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 9e-29 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 4e-28 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 5e-28 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 2e-26 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 5e-25 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 6e-24 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 6e-24 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 1e-23 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 1e-22 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 1e-21 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 2e-20 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 3e-20 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 4e-20 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 6e-20 | |
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 7e-20 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 8e-20 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 1e-19 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 2e-19 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 2e-19 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 3e-19 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 3e-19 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 3e-19 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 6e-19 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 7e-19 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 1e-18 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 2e-18 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 2e-18 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 3e-18 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 4e-18 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 1e-17 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 3e-17 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 9e-17 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 1e-16 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 2e-16 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 3e-16 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 5e-16 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 1e-15 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 1e-15 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 2e-15 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 3e-15 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 3e-15 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 4e-15 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 4e-15 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 1e-14 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 1e-14 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 3e-14 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 4e-13 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 5e-13 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 6e-13 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 7e-13 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 8e-13 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 2e-12 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 7e-12 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 1e-11 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 3e-11 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 6e-11 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 5e-10 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 5e-10 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 1e-09 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 1e-09 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 2e-09 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 4e-09 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 5e-08 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 2e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-07 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 3e-07 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 6e-07 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 1e-06 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 4e-06 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 8e-06 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 1e-05 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 2e-05 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 2e-05 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 2e-05 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 3e-05 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 4e-05 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 7e-05 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 1e-04 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 2e-04 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 3e-04 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 4e-04 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 5e-04 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 8e-04 |
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 Length = 296 | Back alignment and structure |
|---|
Score = 155 bits (394), Expect = 3e-44
Identities = 59/323 (18%), Positives = 103/323 (31%), Gaps = 71/323 (21%)
Query: 129 ESGAPITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVG---SFHYEKQLKDLGKD 185
+S F Y +AG PV+ + G G G ++ + L +
Sbjct: 11 KSERAYVERFVNAGG-VETRYLEAG----KGQPVILIHGGGAGAESEGNWRNVIPILARH 65
Query: 186 YRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQ 245
YR A+D LG G + K ++ Y+ D
Sbjct: 66 YRVIAMDMLGFGKT--------------------------AKP-----DIEYTQDRRIRH 94
Query: 246 VCYFIKEV-IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPK 304
+ FIK + V +VGNS+GG + + + LV + L+ + G
Sbjct: 95 LHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSA---GLVVEI----- 146
Query: 305 LARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETT 364
+R +I + + E + ++K + D D +
Sbjct: 147 -------------HEDLRPIINYDFT----REGMVHLVKALTNDGFKIDDAMINSRYTYA 189
Query: 365 QHPAAAASFASIMFAP---QGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKR 421
A ++ + M G E + + Q VP ++ GK+D V +
Sbjct: 190 TDEATRKAYVATMQWIREQGGLFYDPEFIRKVQ---VPTLVVQGKDDKVVPVETAYKFLD 246
Query: 422 QVPEAPYYEISPAGHCPHDEVPE 444
+ ++ Y I GH E PE
Sbjct: 247 LIDDSWGYIIPHCGHWAMIEHPE 269
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A Length = 282 | Back alignment and structure |
|---|
Score = 144 bits (365), Expect = 3e-40
Identities = 56/308 (18%), Positives = 95/308 (30%), Gaps = 70/308 (22%)
Query: 145 FNVHYEKAGCENVNSPPVLFLPGFGVG---SFHYEKQLKDLGKDYRAWAIDFLGQGMSLP 201
+Y G PV+ + G G G ++ + L K YR A D +G G +
Sbjct: 15 VLTNYHDVG----EGQPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDR 70
Query: 202 DEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVV 261
E+ YS D W D + + + E ++V
Sbjct: 71 PENYN------------------------------YSKDSWVDHIIGIMDALEIEKAHIV 100
Query: 262 GNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASV 321
GN+ GG +A+ A V + L+ A G +
Sbjct: 101 GNAFGGGLAIATALRYSERVDRMVLMGA---AGTRFDVTEG------------------- 138
Query: 322 RKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAP- 380
+ +W E++ +L D + D + E + P SF+S+ P
Sbjct: 139 ---LNAVWGYTPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPR 195
Query: 381 ----QGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGH 436
S E + +I+G+ED V L++ + A + GH
Sbjct: 196 QRWIDALASSDEDIKTLP---NETLIIHGREDQVVPLSSSLRLGELIDRAQLHVFGRCGH 252
Query: 437 CPHDEVPE 444
E +
Sbjct: 253 WTQIEQTD 260
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 Length = 285 | Back alignment and structure |
|---|
Score = 137 bits (347), Expect = 2e-37
Identities = 59/303 (19%), Positives = 104/303 (34%), Gaps = 50/303 (16%)
Query: 145 FNVHYEKAGCENVNSPPVLFLPGFGVG---SFHYEKQLKDLGKDYRAWAIDFLGQGMSLP 201
H AG + SP V+ L G G G + ++ + DL +++ A D +G G S
Sbjct: 17 LASHALVAG--DPQSPAVVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPDLIGFGQS-- 72
Query: 202 DEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVV 261
+ + + + V + +Q+ + E ++V
Sbjct: 73 ------------------------EYPETYPGHIMSWVGMRVEQILGLMNHFGIEKSHIV 108
Query: 262 GNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASV 321
GNS+GG V + P V L+ + P R P+LAR+L + P
Sbjct: 109 GNSMGGAVTLQLVVEAPERFDKVALMGSVGA----PMNARPPELARLLAF-YADPRLTPY 163
Query: 322 RKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQ 381
R+LI DPE+ + + V + D R F S+ +
Sbjct: 164 RELIHSFV---YDPENFPGMEEIVKSRFEVANDPEVRR--------IQEVMFESMKAGME 212
Query: 382 GNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDE 441
+ L R + + +G++D V L + + + A + GH E
Sbjct: 213 SLVIPPATLGRLP---HDVLVFHGRQDRIVPLDTSLYLTKHLKHAELVVLDRCGHWAQLE 269
Query: 442 VPE 444
+
Sbjct: 270 RWD 272
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A Length = 291 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 1e-35
Identities = 52/307 (16%), Positives = 95/307 (30%), Gaps = 60/307 (19%)
Query: 145 FNVHYEKAGCENVNSPPVLFLPGFGVGSFH---YEKQLKDLGKDYRAWAIDFLGQGMSLP 201
+HY +AG N V+ L G G G+ + + + L + + A+D G G S
Sbjct: 24 LKLHYHEAG--VGNDQTVVLLHGGGPGAASWTNFSRNIAVLARHFHVLAVDQPGYGHSDK 81
Query: 202 DEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVV 261
+ + ++ V +V
Sbjct: 82 RAEHG------------------------------QFNRYAAMALKGLFDQLGLGRVPLV 111
Query: 262 GNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASV 321
GN+LGG AV FA P + L+ G S N + +P + F + +
Sbjct: 112 GNALGGGTAVRFALDYPARAGRLVLMGP---GGLSIN-LFAPDPTEGVKRLSKFSVAPT- 166
Query: 322 RKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQ 381
E++ L+ + D + + P + + ++ +
Sbjct: 167 -------------RENLEAFLRVMVYDKNLITPELVDQRFALASTPESLTATRAMGKSFA 213
Query: 382 GN----LSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHC 437
G + R + P+ LI+G+ED L + +P A + GH
Sbjct: 214 GADFEAGMMWREVYRLR---QPVLLIWGREDRVNPLDGALVALKTIPRAQLHVFGQCGHW 270
Query: 438 PHDEVPE 444
E +
Sbjct: 271 VQVEKFD 277
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A Length = 286 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 7e-34
Identities = 50/306 (16%), Positives = 95/306 (31%), Gaps = 61/306 (19%)
Query: 145 FNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKD----LGKDYRAWAIDFLGQGMSL 200
FN+HY +AG N V+ L G G G+ + ++ + YR D G S
Sbjct: 23 FNIHYNEAG----NGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSD 78
Query: 201 PDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYV 260
+ V + + + ++
Sbjct: 79 AVVMDE------------------------------QRGLVNARAVKGLMDALDIDRAHL 108
Query: 261 VGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPAS 320
VGN++GG A+ FA P + + L+ G P+ + I + P
Sbjct: 109 VGNAMGGATALNFALEYPDRIGKLILMGP---GGLGPSMFAPMPMEGIKLLFKLYAEP-- 163
Query: 321 VRKLIEFIWQKISDPESIAEVLKQVYADHATNVD-TVFTRILETTQHPAAAASFASIMF- 378
E++ ++L+ D + + + R + P +F
Sbjct: 164 -------------SYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQK 210
Query: 379 APQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCP 438
AP L + + +G++D +V GL++ + +A + S G
Sbjct: 211 APLSTWDVTARLGEIK---AKTFITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGAWA 267
Query: 439 HDEVPE 444
E +
Sbjct: 268 QWEHAD 273
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} Length = 289 | Back alignment and structure |
|---|
Score = 125 bits (315), Expect = 6e-33
Identities = 44/305 (14%), Positives = 96/305 (31%), Gaps = 58/305 (19%)
Query: 145 FNVHYEKAGCENVNSPPVLFLPGFGVGSF---HYEKQLKDL-GKDYRAWAIDFLGQGMSL 200
+H+ G + V+ L G G G+ ++ + + L YR +D G G S
Sbjct: 25 LRIHFNDCGQGD---ETVVLLHGSGPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKSD 81
Query: 201 PDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYV 260
+ DL + + ++ +++
Sbjct: 82 SVVNSG------------------------------SRSDLNARILKSVVDQLDIAKIHL 111
Query: 261 VGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPAS 320
+GNS+GG +V F P V + L+ P+ + + R+ P +
Sbjct: 112 LGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQL-YRQPTIEN 170
Query: 321 VRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFA- 379
++ +++ D + + R+ +F + A
Sbjct: 171 LKLMMDIFV---FDTSDLTD-------------ALFEARLNNMLSRRDHLENFVKSLEAN 214
Query: 380 PQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPH 439
P+ F L+ + +++G+ D +V GL++ + + + GH
Sbjct: 215 PKQFPDFGPRLAEIK---AQTLIVWGRNDRFVPMDAGLRLLSGIAGSELHIFRDCGHWAQ 271
Query: 440 DEVPE 444
E +
Sbjct: 272 WEHAD 276
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} Length = 272 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 9e-29
Identities = 38/301 (12%), Positives = 75/301 (24%), Gaps = 59/301 (19%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK--DYRAWAIDFLGQGMSLPDE 203
N+ Y G + P++FL G + + L Y+ +D G G S P
Sbjct: 12 NISYFSIG----SGTPIIFLHGLSLDKQSTCLFFEPLSNVGQYQRIYLDLPGMGNSDPIS 67
Query: 204 DPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGN 263
S ++ + + + + + G+
Sbjct: 68 PS-------------------------------TSDNVLETLIEAIEEIIGARRFILYGH 96
Query: 264 SLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRK 323
S GG++A A GV L + + I +
Sbjct: 97 SYGGYLAQAIAFHLKDQTLGVFLTCPVIT----ADHSKRLTGKHINILEEDINPVENKEY 152
Query: 324 LIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGN 383
+F+ + + + D + +
Sbjct: 153 FADFLSMNVIINNQAWHDYQNLIIPGLQKED------------KTFIDQLQNNY-----S 195
Query: 384 LSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVP 443
+F E L P ++ G+ D V L++ ++ GH +
Sbjct: 196 FTFEEKLKNINYQ-FPFKIMVGRNDQVVGYQEQLKLINHNENGEIVLLNRTGHNLMIDQR 254
Query: 444 E 444
E
Sbjct: 255 E 255
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} Length = 269 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 4e-28
Identities = 46/309 (14%), Positives = 90/309 (29%), Gaps = 70/309 (22%)
Query: 145 FNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDED 204
+ + + ++FL GF S Y ++ +Y ID
Sbjct: 6 YKFYEANVE----TNQVLVFLHGFLSDSRTYHNHIEKFTDNYHVITID------------ 49
Query: 205 PTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNS 264
L G G+ ++ D + + + + + + G S
Sbjct: 50 ----------------LPGHGEDQSSMDE--TWNFDYITTLLDRILDKYKDKSITLFGYS 91
Query: 265 LGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKL 324
+GG VA+Y+A + + L + +P G + R+L
Sbjct: 92 MGGRVALYYAINGHIPISNLILESTSP--GIKEEANQ------------------LERRL 131
Query: 325 IEFIWQKISDPESIAEVLKQVY---------ADHATNVDTVFTRILETTQHPAAAASFAS 375
++ K+ D I + + + L + H A +
Sbjct: 132 VDDARAKVLDIAGIELFVNDWEKLPLFQSQLELPVEIQHQIRQQRLSQSPH-KMAKALRD 190
Query: 376 IMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAG 435
NL L + VP ++ G+ D + ++ +P + IS G
Sbjct: 191 YGTGQMPNL--WPRLKEIK---VPTLILAGEYDEKFVQI-AKKMANLIPNSKCKLISATG 244
Query: 436 HCPHDEVPE 444
H H E +
Sbjct: 245 HTIHVEDSD 253
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} Length = 306 | Back alignment and structure |
|---|
Score = 112 bits (281), Expect = 5e-28
Identities = 47/299 (15%), Positives = 85/299 (28%), Gaps = 62/299 (20%)
Query: 147 VHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPT 206
H +G E+ +PP++ L G S + + D YR +A+D
Sbjct: 57 THVIASGPED--APPLVLLHGALFSSTMWYPNIADWSSKYRTYAVD-------------- 100
Query: 207 PRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLG 266
+ G +K+ P + + + + + E +++G SLG
Sbjct: 101 --------------IIGDKNKSIPENVS--GTRTDYANWLLDVFDNLGIEKSHMIGLSLG 144
Query: 267 GFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIE 326
G + F P VK +L+ + P K
Sbjct: 145 GLHTMNFLLRMPERVKSAAILSPAETFL---------------------PFHHDFYKY-- 181
Query: 327 FIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSF 386
++ + L + D + + + +
Sbjct: 182 --ALGLTASNGVETFLNWMMNDQNVLHPIFVKQFKAGVMWQDGSRNPNP-NADGFPYVFT 238
Query: 387 REALSRCQMNGVPICLIYGKEDPWVKPVWGLQ-VKRQVPEAPYYEISPAGHCPHDEVPE 444
E L ++ PI L+ G+ + P L VP+ I AGH E P
Sbjct: 239 DEELRSARV---PILLLLGEHEVIYDPHSALHRASSFVPDIEAEVIKNAGHVLSMEQPT 294
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} Length = 315 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 2e-26
Identities = 53/321 (16%), Positives = 95/321 (29%), Gaps = 72/321 (22%)
Query: 145 FNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDE 203
++ Y + N +L + G + +E+ + L YR A+D +G
Sbjct: 32 LSMAYLDVAPKKANGRTILLMHGKNFCAGTWERTIDVLADAGYRVIAVDQVG-------- 83
Query: 204 DPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGN 263
F ++P + YS ++ + V+G+
Sbjct: 84 --------------------FCKSSKPAHYQ--YSFQQLAANTHALLERLGVARASVIGH 121
Query: 264 SLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRK 323
S+GG +A +A P V+ + L+N + A +PW SV
Sbjct: 122 SMGGMLATRYALLYPRQVERLVLVNPIGLEDW---------KALGVPW-------RSVDD 165
Query: 324 LIEFIWQKISDPESIAEVLKQVYADHATN--VDTVFTRILETTQHPAAAASFASIMFAPQ 381
Q + E I + + Y D + + +
Sbjct: 166 WYRRDLQ--TSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAWNSALTYD 223
Query: 382 GNLS--FREALSRCQMNGVPICLIYGKEDPWV----------------KPVWGLQVKRQV 423
+ L R Q +P L+ G++D G R++
Sbjct: 224 MIFTQPVVYELDRLQ---MPTLLLIGEKDNTAIGKDAAPAELKARLGNYAQLGKDAARRI 280
Query: 424 PEAPYYEISPAGHCPHDEVPE 444
P+A E GH P + PE
Sbjct: 281 PQATLVEFPDLGHTPQIQAPE 301
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 Length = 258 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 5e-25
Identities = 44/300 (14%), Positives = 84/300 (28%), Gaps = 60/300 (20%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDP 205
N+ ++ G + ++ L G+G+ + + ++L + +D G G S
Sbjct: 3 NIWWQTKGQG---NVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRS----RG 55
Query: 206 TPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSL 265
A S+ + V + + +G SL
Sbjct: 56 FG----------------------------ALSLADMAEAV----LQQAPDKAIWLGWSL 83
Query: 266 GGFVAVYFAACNPHLVKGVTLLNATPFWGFSP-NPIRSPKLARILPWSGTFPLPASVRKL 324
GG VA A +P V+ + + ++P + P P + + +V +
Sbjct: 84 GGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERF 143
Query: 325 IEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNL 384
+ A LK+ I+
Sbjct: 144 LALQTMGTETARQDARALKKTVLALPMP-------------EVDVLNGGLEILKTV---- 186
Query: 385 SFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPE 444
R+ L +P +YG D V + + P + Y + A H P P
Sbjct: 187 DLRQPLQNVS---MPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISHPA 243
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} Length = 278 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 6e-24
Identities = 33/302 (10%), Positives = 83/302 (27%), Gaps = 44/302 (14%)
Query: 143 PKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPD 202
P+ Y G PP+ + + + Y + ++ G G S
Sbjct: 11 PRGKFEYFLKG----EGPPLCVTHLYSEYNDNGNTFANPFTDHYSVYLVNLKGCGNSDSA 66
Query: 203 EDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVG 262
++ + YS+ + + + G
Sbjct: 67 KNDSE-----------------------------YSMTETIKDLEAIREALYINKWGFAG 97
Query: 263 NSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVR 322
+S GG +A+ +A + + + A + S K + + F +
Sbjct: 98 HSAGGMLALVYATEAQESLTKIIVGGA-----AASKEYASHKDSIYCSKNVKFNR---IV 149
Query: 323 KLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQG 382
++ + + E + ++ + + + +
Sbjct: 150 SIMNALNDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYK 209
Query: 383 NLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEV 442
+ R+ L + +P + GK D ++ ++ +P A + + H P E
Sbjct: 210 DYDVRQKLKFVK---IPSFIYCGKHDVQCPYIFSCEIANLIPNATLTKFEESNHNPFVEE 266
Query: 443 PE 444
+
Sbjct: 267 ID 268
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* Length = 271 | Back alignment and structure |
|---|
Score = 99.6 bits (249), Expect = 6e-24
Identities = 47/308 (15%), Positives = 91/308 (29%), Gaps = 73/308 (23%)
Query: 148 HYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTP 207
H + G ++F PGFG + +D+R D++G G S
Sbjct: 12 HVKVKGSGK---ASIMFAPGFGCDQSVWNAVAPAFEEDHRVILFDYVGSGHSDLRAYDLN 68
Query: 208 RSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGG 267
R ++D + V + + + VG+S+G
Sbjct: 69 R---------------------------YQTLDGYAQDVLDVCEALDLKETVFVGHSVGA 101
Query: 268 FVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEF 327
+ + + P L + ++ +P L + G F
Sbjct: 102 LIGMLASIRRPELFSHLVMVGPSP-----------CYLNDPPEYYGGF------------ 138
Query: 328 IWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFA--PQGNLS 385
+ E + +L+ + ++ +L P S + P
Sbjct: 139 ------EEEQLLGLLEMMEKNYIGWATVFAATVLNQPDRPEIKEELESRFCSTDPVIARQ 192
Query: 386 ---------FREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGH 436
RE LS+ VP ++ +D G + + +P + ++ GH
Sbjct: 193 FAKAAFFSDHREDLSKVT---VPSLILQCADDIIAPATVGKYMHQHLPYSSLKQMEARGH 249
Query: 437 CPHDEVPE 444
CPH P+
Sbjct: 250 CPHMSHPD 257
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} Length = 314 | Back alignment and structure |
|---|
Score = 99.8 bits (249), Expect = 1e-23
Identities = 57/297 (19%), Positives = 97/297 (32%), Gaps = 55/297 (18%)
Query: 148 HYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTP 207
+ + G + P +LF G S +E + L + A+D G G+S
Sbjct: 61 NVREKG----SGPLMLFFHGITSNSAVFEPLMIRLSDRFTTIAVDQRGHGLS-------- 108
Query: 208 RSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGG 267
+P Y + + D + I+ + R +VG+SLG
Sbjct: 109 --------------------DKPET---GYEANDYADDIAGLIRTLARGHAILVGHSLGA 145
Query: 268 FVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEF 327
+V AA P LV+ V ++ TP+ AR+ S F +V +
Sbjct: 146 RNSVTAAAKYPDLVRSVVAIDFTPYI---ETEALDALEARVNAGSQLFEDIKAVEAYLAG 202
Query: 328 IWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFR 387
+ P A+ ++ VD L AA A A + +
Sbjct: 203 RY-----PNIPADAIRIRAESGYQPVD----GGLRPLASSAAMAQTARGLRSD-----LV 248
Query: 388 EALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPE 444
A P+ ++ G+ V + R P+ P + A H ++ PE
Sbjct: 249 PAYRDVTK---PVLIVRGESSKLVSAAALAKTSRLRPDLPVVVVPGADHYVNEVSPE 302
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} Length = 282 | Back alignment and structure |
|---|
Score = 96.2 bits (240), Expect = 1e-22
Identities = 40/317 (12%), Positives = 89/317 (28%), Gaps = 77/317 (24%)
Query: 148 HYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTP 207
+ G VL GFG + L +L K + D
Sbjct: 20 NINITGGGE---KTVLLAHGFGCDQNMWRFMLPELEKQFTVIVFD--------------- 61
Query: 208 RSKEGDSTEEKNFLWGFGDKAQP-WASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLG 266
G G ++++ S++ + V + + V ++G+S+
Sbjct: 62 -------------YVGSGQSDLESFSTKRYSSLEGYAKDVEEILVALDLVNVSIIGHSVS 108
Query: 267 GFVAVYFAACNPHLVKGVTLLNATP-FWGFSPNPIRSPKLARILPWSGTFPLPASVRKLI 325
+A + + +T++ +P F F P+ + G F
Sbjct: 109 SIIAGIASTHVGDRISDITMICPSPCFMNFPPD------------YVGGFE--------- 147
Query: 326 EFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFA--PQGN 383
+ + E++ + ++ + + ++ + + P
Sbjct: 148 ---------RDDLEELINLMDKNYIGWANYLAPLVMGASHSSELIGELSGSFCTTDPIVA 198
Query: 384 LS---------FREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPA 434
+ +R L P + +D P G + +P + I
Sbjct: 199 KTFAKATFFSDYRSLLEDIS---TPALIFQSAKDSLASPEVGQYMAENIPNSQLELIQAE 255
Query: 435 GHCPHDEVPEVCSLCLL 451
GHC H + + L+
Sbjct: 256 GHCLHMTDAGLITPLLI 272
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} Length = 268 | Back alignment and structure |
|---|
Score = 93.1 bits (232), Expect = 1e-21
Identities = 51/301 (16%), Positives = 89/301 (29%), Gaps = 61/301 (20%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHY-EKQLKDLGKDYRAWAIDFLGQGMSLPDED 204
++ ++P V+ + G G GS Y QL L ++Y+ D G G + PD
Sbjct: 6 SLSPPPYA----DAPVVVLISGLG-GSGSYWLPQLAVLEQEYQVVCYDQRGTGNN-PDTL 59
Query: 205 PTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNS 264
YS+ ++ + E VVG++
Sbjct: 60 AED-----------------------------YSIAQMAAELHQALVAAGIEHYAVVGHA 90
Query: 265 LGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKL 324
LG V + A P V + +N + R+L G A V
Sbjct: 91 LGALVGMQLALDYPASVTVLISVNGWLRIN-AHTRRCFQVRERLLYSGG---AQAWVEAQ 146
Query: 325 IEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAA-AASFASIMFAPQGN 383
F++ P A A ++ L Q ++
Sbjct: 147 PLFLY-----PADWM-------AARAPRLEAEDALALAHFQGKNNLLRRLNAL-----KR 189
Query: 384 LSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVP 443
F R + P+ +I +D V ++ +P++ + GH + P
Sbjct: 190 ADFSHHADRIR---CPVQIICASDDLLVPTACSSELHAALPDSQKMVMPYGGHACNVTDP 246
Query: 444 E 444
E
Sbjct: 247 E 247
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} Length = 245 | Back alignment and structure |
|---|
Score = 88.9 bits (221), Expect = 2e-20
Identities = 42/303 (13%), Positives = 82/303 (27%), Gaps = 75/303 (24%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDP 205
+HY G + + +LF+ G G + + +DY +D G G S
Sbjct: 4 MLHYVHVGNKK-SPNTLLFVHGSGCNLKIFGELE-KYLEDYNCILLDLKGHGES------ 55
Query: 206 TPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI----REPVYVV 261
P +V + D V FI ++ + ++
Sbjct: 56 --------------------KGQCP------STVYGYIDNVANFITNSEVTKHQKNITLI 89
Query: 262 GNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASV 321
G S+GG + + A V+ V L+ +
Sbjct: 90 GYSMGGAIVLGVALKKLPNVRKVVSLSGGARFD--------------------------- 122
Query: 322 RKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQ 381
KL + +KI + L + + + LE A +
Sbjct: 123 -KLDKDFMEKIYHNQLDNNYLLECIGGIDNPLSEKYFETLEKDPDIMINDLIACKLI--- 178
Query: 382 GNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDE 441
+ L +P+ I K++ + +K++V + H
Sbjct: 179 ---DLVDNLKNID---IPVKAIVAKDELLTLVEYSEIIKKEVENSELKIFETGKHFLLVV 232
Query: 442 VPE 444
+
Sbjct: 233 NAK 235
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} Length = 285 | Back alignment and structure |
|---|
Score = 89.4 bits (222), Expect = 3e-20
Identities = 47/301 (15%), Positives = 86/301 (28%), Gaps = 48/301 (15%)
Query: 147 VHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPT 206
+H+ + + PPVL LPG + +E L D+R + G+G S
Sbjct: 18 LHFRAYEGDI-SRPPVLCLPGLTRNARDFEDLATRLAGDWRVLCPEMRGRGDS------- 69
Query: 207 PRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLG 266
D A+ + Y + + + + E +G SLG
Sbjct: 70 -------------------DYAKDPMT---YQPMQYLQDLEALLAQEGIERFVAIGTSLG 107
Query: 267 GFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIE 326
G + + AA NP + L + P + L RI + G +
Sbjct: 108 GLLTMLLAAANPARIAAAVLNDVGPE-------VSPEGLERIRGYVGQGRNFETWMHAAR 160
Query: 327 FIWQKISDP---ESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGN 383
+ + D I + L+ + A F + +
Sbjct: 161 ALQESSGDVYPDWDITQWLRYAKRIMVLGSS----GRIAFDYDMKIAEPFEAPV-GATPQ 215
Query: 384 LSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVP 443
+ + P+ ++ G+ + P + GH P + P
Sbjct: 216 VDMWPLFDA--LATRPLLVLRGETSDIL-SAQTAAKMASRPGVELVTLPRIGHAPTLDEP 272
Query: 444 E 444
E
Sbjct: 273 E 273
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A Length = 254 | Back alignment and structure |
|---|
Score = 88.5 bits (220), Expect = 4e-20
Identities = 54/302 (17%), Positives = 92/302 (30%), Gaps = 72/302 (23%)
Query: 145 FNVHYEKAGCENVNSPPVLFLPGF-GVGSFHYEKQLKDLGKD-YRAWAIDFLGQGMSLPD 202
+HY++ G VL LPG G G + QLK+L K + A D G G S P
Sbjct: 12 VQLHYQQTGEG---DHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPP 68
Query: 203 EDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVG 262
+ P + +K + + V ++G
Sbjct: 69 DRDFPA----------------------------DFFERDAKDAVDLMKALKFKKVSLLG 100
Query: 263 NSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVR 322
S GG A+ AA P + + + A + + + + + WS R
Sbjct: 101 WSDGGITALIAAAKYPSYIHKMVIWGANAYVT-DEDSMIYEGIRDVSKWS------ERTR 153
Query: 323 KLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQG 382
K +E ++ + A P G
Sbjct: 154 KPLEALY----GYDYFART------------------------CEKWVDGIRQFKHLPDG 185
Query: 383 NLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEV 442
N+ R L R Q P +++G++DP V + + V + + + H H
Sbjct: 186 NI-CRHLLPRVQ---CPALIVHGEKDPLVPRFHADFIHKHVKGSRLHLMPEGKHNLHLRF 241
Query: 443 PE 444
+
Sbjct: 242 AD 243
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} Length = 262 | Back alignment and structure |
|---|
Score = 88.2 bits (219), Expect = 6e-20
Identities = 38/296 (12%), Positives = 79/296 (26%), Gaps = 59/296 (19%)
Query: 147 VHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPT 206
+ +E++G + PPV+ + G + L + D G+G S D
Sbjct: 15 IAFERSG----SGPPVVLVGGALSTRAGGAPLAERLAPHFTVICYDRRGRGDS---GDTP 67
Query: 207 PRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLG 266
P Y+V+ + + I + +V G S G
Sbjct: 68 P-----------------------------YAVEREIEDLAAII-DAAGGAAFVFGMSSG 97
Query: 267 GFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIE 326
+++ AA + + + S P+ R+ +V +
Sbjct: 98 AGLSLLAAASGLPITRLA-VFEPPYAVDDSRPPVPPDYQTRLDALLAEGRRGDAVTYFMT 156
Query: 327 FIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSF 386
P+ +A++ + A A + N
Sbjct: 157 EGVG--VPPDLVAQMQ----------------QAPMWPGMEAVAHTLPYDHAVMGDNTIP 198
Query: 387 REALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEV 442
+ +P ++ G P ++ +P A Y + H +
Sbjct: 199 TARFASIS---IPTLVMDGGASPAWIRHTAQELADTIPNARYVTLENQTHTVAPDA 251
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} Length = 266 | Back alignment and structure |
|---|
Score = 88.1 bits (219), Expect = 7e-20
Identities = 48/302 (15%), Positives = 85/302 (28%), Gaps = 66/302 (21%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDP 205
++ Y G P + G ++ QL L + +R D G G S P
Sbjct: 16 SLAYRLDGAAE--KPLLALSNSIGTTLHMWDAQLPALTRHFRVLRYDARGHGASSVPPGP 73
Query: 206 TPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSL 265
Y++ + V + + + +G SL
Sbjct: 74 -------------------------------YTLARLGEDVLELLDALEVRRAHFLGLSL 102
Query: 266 GGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPL-PASVRKL 324
GG V + A P ++ + L N + P ++A +L +
Sbjct: 103 GGIVGQWLALHAPQRIERLVLANTSA--WLGPAAQWDERIAAVLQAEDMSETAAGFLGNW 160
Query: 325 I--EFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQG 382
+ + +L T A SFA++
Sbjct: 161 FPPALL---ERAEPVVERFR----------------AMLMATNRHGLAGSFAAV-----R 196
Query: 383 NLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEV 442
+ R L+R + P +I G D G + + A + PA H + E
Sbjct: 197 DTDLRAQLARIE---RPTLVIAGAYDTVTAASHGELIAASIAGARLVTL-PAVHLSNVEF 252
Query: 443 PE 444
P+
Sbjct: 253 PQ 254
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* Length = 279 | Back alignment and structure |
|---|
Score = 88.2 bits (219), Expect = 8e-20
Identities = 49/304 (16%), Positives = 99/304 (32%), Gaps = 55/304 (18%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDED 204
++YE G + PV+ + G+ + +E+Q ++L + YR D G G S
Sbjct: 14 ELYYEDQG----SGQPVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFGGS----- 64
Query: 205 PTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNS 264
++ Y D + + ++ + V +VG S
Sbjct: 65 -----------------------SKVNT---GYDYDTFAADLHTVLETLDLRDVVLVGFS 98
Query: 265 LGGFVAV-YFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRK 323
+G Y A V + L + P ++ +P + A+ +
Sbjct: 99 MGTGELARYVARYGHERVAKLAFLASLE-----PFLVQRDDNPEGVPQEVFDGIEAAAKG 153
Query: 324 LIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASF-ASIMFAPQG 382
+ K Y + + + + + A ++ A+ P
Sbjct: 154 ---------DRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAW 204
Query: 383 NLSFREALSRCQMNGVPICLIYGKEDPWVKPVW--GLQVKRQVPEAPYYEISPAGHCPHD 440
FR + + G P +++G +D + P+ + + VPEA Y E+ A H
Sbjct: 205 IEDFRSDVEAVRAAGKPTLILHGTKDNIL-PIDATARRFHQAVPEADYVEVEGAPHGLLW 263
Query: 441 EVPE 444
+
Sbjct: 264 THAD 267
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* Length = 298 | Back alignment and structure |
|---|
Score = 88.0 bits (218), Expect = 1e-19
Identities = 37/307 (12%), Positives = 67/307 (21%), Gaps = 44/307 (14%)
Query: 147 VHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKD--LGKDYRAWAIDFLGQGMSLPDED 204
+ + G + P +L + G + + + + D G S +
Sbjct: 13 LWSDDFG--DPADPALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDTGRSTTRDF 70
Query: 205 PTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNS 264
Y + + +VVG S
Sbjct: 71 AAH----------------------------PYGFGELAADAVAVLDGWGVDRAHVVGLS 102
Query: 265 LGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKL 324
+G + A + + +T+L I P + L
Sbjct: 103 MGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLDAL 162
Query: 325 IEFIWQKISDPESIAEVLKQ-------VYADHATNVDTVFTRILETTQHPAAAASFASIM 377
+A+ + + R ++ A
Sbjct: 163 ALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAH--Y 220
Query: 378 FAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHC 437
S L VP +I + DP G + +P A EI GH
Sbjct: 221 SLTLPPPSRAAELREVT---VPTLVIQAEHDPIAPAPHGKHLAGLIPTARLAEIPGMGHA 277
Query: 438 PHDEVPE 444
V
Sbjct: 278 LPSSVHG 284
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} Length = 292 | Back alignment and structure |
|---|
Score = 87.3 bits (216), Expect = 2e-19
Identities = 31/294 (10%), Positives = 72/294 (24%), Gaps = 64/294 (21%)
Query: 158 NSPPVLFLPGFGVGS--FHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDST 215
+P +FL G G S ++ + L ID G S
Sbjct: 40 GNPCFVFLSGAGFFSTADNFANIIDKLPDSIGILTIDAPNSGYS---------------- 83
Query: 216 EEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAA 275
P +++ + W + + + + + +S+GGF A+
Sbjct: 84 --------------PVSNQANVGLRDWVNAILMIFEHFKFQSYLLCVHSIGGFAALQIMN 129
Query: 276 CNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDP 335
+ G L T + R+ + + P + +S
Sbjct: 130 QSSKACLGFIGLEPT-----TVMIYRAGFSSDLYPQLALRRQKLKTAADRLNYLKDLSRS 184
Query: 336 ESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQM 395
++ KQ++ + + P + +
Sbjct: 185 HFSSQQFKQLWRGYDYC-----------------QRQLNDVQSLPDFKIRLALGEEDFKT 227
Query: 396 NG---VPICLIYGK--EDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPE 444
+P + E +++ + + + + H H
Sbjct: 228 GISEKIPSIVFSESFREKEYLES----EYLNKHTQT-KLILCGQHHYLHWSETN 276
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 Length = 275 | Back alignment and structure |
|---|
Score = 86.5 bits (215), Expect = 2e-19
Identities = 57/306 (18%), Positives = 96/306 (31%), Gaps = 59/306 (19%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDED 204
N+ Y+ G + PV+F G+ + + ++ Q+ YR A D
Sbjct: 10 NIFYKDWG--PRDGLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDR----------- 56
Query: 205 PTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV-IREPVYVVGN 263
R G G QP + +D + V + + +R V +G+
Sbjct: 57 ---R--------------GHGRSDQPST---GHDMDTYAADVAALTEALDLRGAV-HIGH 95
Query: 264 SLGG-FVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVR 322
S GG VA Y A P V L++A P P ++S LP A++
Sbjct: 96 STGGGEVARYVARAEPGRVAKAVLVSAVP-----PVMVKSDTNPDGLPLEVFDEFRAALA 150
Query: 323 KLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQ---HPAAAASFASIMFA 379
+ +V + TV +++ AA + + A
Sbjct: 151 ANR---------AQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAA 201
Query: 380 PQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVW-GLQVKRQVPEAPYYEISPAGHCP 438
F + L R VP+ + +G +D V + + A H
Sbjct: 202 -FSETDFTDDLKRID---VPVLVAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPHGM 257
Query: 439 HDEVPE 444
PE
Sbjct: 258 LSTHPE 263
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} Length = 266 | Back alignment and structure |
|---|
Score = 86.5 bits (215), Expect = 3e-19
Identities = 49/304 (16%), Positives = 87/304 (28%), Gaps = 69/304 (22%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDP 205
+HY G + N+P ++ G + Q+ L K +R D G G S + P
Sbjct: 13 ELHYRIDGERHGNAPWIVLSNSLGTDLSMWAPQVAALSKHFRVLRYDTRGHGHSEAPKGP 72
Query: 206 TPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSL 265
Y+++ V + + G S+
Sbjct: 73 -------------------------------YTIEQLTGDVLGLMDTLKIARANFCGLSM 101
Query: 266 GGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLI 325
GG V AA + ++ V L N + R R
Sbjct: 102 GGLTGVALAARHADRIERVALCNTAA--RIGS---PEVWVPRA----------VKART-- 144
Query: 326 EFIWQKISDPESIAE-VLKQVYAD--HATNVDTV--FTRILETTQHPAAAASFASIMFAP 380
++A+ VL + + + + T A++ +I
Sbjct: 145 -------EGMHALADAVLPRWFTADYMEREPVVLAMIRDVFVHTDKEGYASNCEAI---- 193
Query: 381 QGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHD 440
R + VP +I G D P G ++ + + A Y E+ A H +
Sbjct: 194 -DAADLRPEAPGIK---VPALVISGTHDLAATPAQGRELAQAIAGARYVEL-DASHISNI 248
Query: 441 EVPE 444
E +
Sbjct: 249 ERAD 252
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* Length = 398 | Back alignment and structure |
|---|
Score = 88.3 bits (218), Expect = 3e-19
Identities = 43/336 (12%), Positives = 83/336 (24%), Gaps = 62/336 (18%)
Query: 137 CFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRA-------- 188
+ + + ++FL G G+ +E L L
Sbjct: 34 TYDVYTSAERQRRSRTA----TRLNLVFLHGSGMSKVVWEYYLPRLVAADAEGNYAIDKV 89
Query: 189 WAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCY 248
ID + G S G A ++
Sbjct: 90 LLIDQVNHGDSAVRNRGR---------------LGTNFNWIDGARDVLKIATCELGS--- 131
Query: 249 FIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNA---TPFWGFSPNPIRSPKL 305
+ V+G+S+GGF A+ P+L + L+ T + P P
Sbjct: 132 --IDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVITRKAIGAGRPGLPPDS 189
Query: 306 ARILPWSGTFPLPASVRKLIEFIWQ---------------KISDPESIAEVLKQVYADHA 350
+I L S+R + + + + ++ +
Sbjct: 190 PQIPE-----NLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQNIIDFERTKAS 244
Query: 351 TNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPW 410
+ + + Q FAP + + I G W
Sbjct: 245 GDDEDGGPVRTKMEQAQNLLCYMNMQTFAPFL----ISNVKFVR---KRTIHIVGARSNW 297
Query: 411 VKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVC 446
P L +++ + I H + E P++
Sbjct: 298 CPPQNQLFLQKTLQNYHLDVIPGGSHLVNVEAPDLV 333
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A Length = 277 | Back alignment and structure |
|---|
Score = 86.2 bits (214), Expect = 3e-19
Identities = 51/308 (16%), Positives = 89/308 (28%), Gaps = 65/308 (21%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDED 204
+++YE G PV+ + GF + +E+Q L YR D
Sbjct: 14 DLYYEDHG----TGQPVVLIHGFPLSGHSWERQSAALLDAGYRVITYD------------ 57
Query: 205 PTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR----EPVYV 260
GFG +QP Y D + + V+ + +
Sbjct: 58 ----------------RRGFGQSSQPTT---GYDYDTFAADL----NTVLETLDLQDAVL 94
Query: 261 VGNSLGGFVAV-YFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPA 319
VG S G Y ++ + V L + P +++ G P
Sbjct: 95 VGFSTGTGEVARYVSSYGTARIAKVAFLASLE-----PFLLKTD-----DNPDGAAPQEF 144
Query: 320 SVRKLIEFIWQKISDPES-IAEVLKQVYADHATNVDTVFTRILETTQHPAAAASF-ASIM 377
+ +D + Y + + + + AA+ F A+
Sbjct: 145 ----FDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAA 200
Query: 378 FAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVW-GLQVKRQVPEAPYYEISPAGH 436
FR + R VP +++G D + + +P A Y E+ A H
Sbjct: 201 APTTWYTDFRADIPRID---VPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPH 257
Query: 437 CPHDEVPE 444
E
Sbjct: 258 GLLWTHAE 265
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} PDB: 1va4_A 3hi4_A 3hea_A Length = 271 | Back alignment and structure |
|---|
Score = 85.4 bits (212), Expect = 6e-19
Identities = 59/309 (19%), Positives = 97/309 (31%), Gaps = 69/309 (22%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDED 204
++++ G + PVLF G+ + + +E Q++ L + YR A D
Sbjct: 10 QIYFKDWG----SGKPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFD------------ 53
Query: 205 PTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNS 264
GFG QPW D + D + I+ + + V +VG S
Sbjct: 54 ----------------RRGFGRSDQPWT---GNDYDTFADDIAQLIEHLDLKEVTLVGFS 94
Query: 265 LGGFVAV-YFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRK 323
+GG Y A V G+ LL A P + P +P +
Sbjct: 95 MGGGDVARYIARHGSARVAGLVLLGAVT-----PLFGQKP----------DYPQGVPLDV 139
Query: 324 LIEFIWQKISD-PESIAEVLKQVYADHATN-----VDTVFTRILETTQHPAAAASFASIM 377
F + + D + I++ Y + V T +I A +
Sbjct: 140 FARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFA 199
Query: 378 FAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVW--GLQVKRQVPEAPYYEISPAG 435
FR +++ VP +I+G D V P G + A A
Sbjct: 200 -----ETDFRPDMAKID---VPTLVIHGDGDQIV-PFETTGKVAAELIKGAELKVYKDAP 250
Query: 436 HCPHDEVPE 444
H +
Sbjct: 251 HGFAVTHAQ 259
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A Length = 286 | Back alignment and structure |
|---|
Score = 85.6 bits (211), Expect = 7e-19
Identities = 37/314 (11%), Positives = 92/314 (29%), Gaps = 70/314 (22%)
Query: 143 PKFNVHYEKAGCENVNSPPVLFLPGFG------VGSFHYEKQLKDLGKDYRAWAIDFLGQ 196
P +V + G P + G ++++ +++ +D G
Sbjct: 19 PYGSVTFTVYGTPKPKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEIIQNFVRVHVDAPGM 78
Query: 197 GMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIRE 256
P + S+D D + ++ +
Sbjct: 79 EEGAPVFPLGYQY---------------------------PSLDQLADMIPCILQYLNFS 111
Query: 257 PVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFP 316
+ VG G ++ +A +P V+G+ L+N P W
Sbjct: 112 TIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDP---------------NAKGW----- 151
Query: 317 LPASVRKLIEFIWQKISD-PESIAEVLKQVY---ADHATNVDTV--FTRILETTQHPAAA 370
+++ K++ SI +++ + + N + + + I++ +
Sbjct: 152 --------MDWAAHKLTGLTSSIPDMILGHLFSQEELSGNSELIQKYRGIIQHAPNLENI 203
Query: 371 ASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYE 430
+ + + R + + P+ L+ G + P V K + + +
Sbjct: 204 ELYWNSYNNRRDLNFERGGETTLK---CPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLK 260
Query: 431 ISPAGHCPHDEVPE 444
++ +G P P
Sbjct: 261 MADSGGQPQLTQPG 274
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} Length = 281 | Back alignment and structure |
|---|
Score = 84.8 bits (210), Expect = 1e-18
Identities = 52/310 (16%), Positives = 88/310 (28%), Gaps = 69/310 (22%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDED 204
++YE G PV+ + G+ + +E Q+ L YR D G G S
Sbjct: 18 EIYYEDHG----TGKPVVLIHGWPLSGRSWEYQVPALVEAGYRVITYDRRGFGKS----- 68
Query: 205 PTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNS 264
+QPW Y D + + ++++ + V +VG S
Sbjct: 69 -----------------------SQPWE---GYEYDTFTSDLHQLLEQLELQNVTLVGFS 102
Query: 265 LGGFVAV-YFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRK 323
+GG Y + ++ V A P P +S P A
Sbjct: 103 MGGGEVARYISTYGTDRIEKVVFAGAVP-----PYLYKSE----------DHPEGALDDA 147
Query: 324 LIEFIWQKISD--PESIAEVLKQVYADHATN------VDTVFTRILETTQHPAAAASFAS 375
IE + + + E K +A I +
Sbjct: 148 TIETFKSGVINDRLAFLDEFTKGFFAAGDRTDLVSESFRLYNWDIAAGASPKGTLDCITA 207
Query: 376 IMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKP-VWGLQVKRQVPEAPYYEISPA 434
FR+ L + +P +I+G D V G +P + I
Sbjct: 208 FS-----KTDFRKDLEKFN---IPTLIIHGDSDATVPFEYSGKLTHEAIPNSKVALIKGG 259
Query: 435 GHCPHDEVPE 444
H + +
Sbjct: 260 PHGLNATHAK 269
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A Length = 456 | Back alignment and structure |
|---|
Score = 86.4 bits (214), Expect = 2e-18
Identities = 51/308 (16%), Positives = 90/308 (29%), Gaps = 65/308 (21%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDED 204
+++YE G PV+ + GF + +E+Q L YR D
Sbjct: 15 DLYYEDHG----TGVPVVLIHGFPLSGHSWERQSAALLDAGYRVITYD------------ 58
Query: 205 PTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR----EPVYV 260
GFG +QP Y D + + V+ + +
Sbjct: 59 ----------------RRGFGQSSQPTT---GYDYDTFAADL----NTVLETLDLQDAVL 95
Query: 261 VGNSLGGFVAV-YFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPA 319
VG S+G Y ++ + V L + P +++ G P
Sbjct: 96 VGFSMGTGEVARYVSSYGTARIAAVAFLASLE-----PFLLKTDD-----NPDGAAPQEF 145
Query: 320 SVRKLIEFIWQKISDPES-IAEVLKQVYADHATNVDTVFTRILETTQHPAAAASF-ASIM 377
+ +D + Y + + + + AA+ F A+
Sbjct: 146 ----FDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAA 201
Query: 378 FAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVW-GLQVKRQVPEAPYYEISPAGH 436
FR + R VP +++G D + + +P A Y E+ A H
Sbjct: 202 APTTWYTDFRADIPRID---VPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPH 258
Query: 437 CPHDEVPE 444
E
Sbjct: 259 GLLWTHAE 266
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A Length = 293 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 2e-18
Identities = 50/302 (16%), Positives = 81/302 (26%), Gaps = 60/302 (19%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKD--LGKDYRAWAIDFLGQGMSLPDE 203
N+ Y+ G PV+F+ G G + L YR D G G + E
Sbjct: 34 NLAYDDNG----TGDPVVFIAGRGGAGRTWHPHQVPAFLAAGYRCITFDNRGIGAT---E 86
Query: 204 DPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGN 263
+ ++ I+ + P VVG
Sbjct: 87 NAEG-----------------------------FTTQTMVADTAALIETLDIAPARVVGV 117
Query: 264 SLGGFVAVYFAACNPHLVKGVTLLNATPFWG-FSPNPIRSPKLARILPWSGTFPLPASVR 322
S+G F+A P LV L+ ++ A R
Sbjct: 118 SMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFNKAEAELYDSGVQLPPTYDARAR 177
Query: 323 KLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQG 382
L F + ++D ++ + + + P
Sbjct: 178 LLENFSRKTLNDDVAVGDWIAMFSMWPIKS-------------TPGLRCQLDCAPQT--- 221
Query: 383 NLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEV 442
+ A P+ +I +D P G +V +P Y +I AGH E
Sbjct: 222 --NRLPAYRNIA---APVLVIGFADDVVTPPYLGREVADALPNGRYLQIPDAGHLGFFER 276
Query: 443 PE 444
PE
Sbjct: 277 PE 278
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} Length = 286 | Back alignment and structure |
|---|
Score = 83.9 bits (208), Expect = 3e-18
Identities = 55/307 (17%), Positives = 99/307 (32%), Gaps = 38/307 (12%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDED 204
+ G + P VL + G +++ L + YR A D G G S
Sbjct: 15 QICLCSWG--SPEHPVVLCIHGILEQGLAWQEVALPLAAQGYRVVAPDLFGHGRS----- 67
Query: 205 PTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNS 264
+ +YS + Q+ I+E+ +P+ +VG+S
Sbjct: 68 ---------------------SHLEMVT---SYSSLTFLAQIDRVIQELPDQPLLLVGHS 103
Query: 265 LGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKL 324
+G +A A+ P +K + L+ S +L L + + P +
Sbjct: 104 MGAMLATAIASVRPKKIKELILVELPLPAEESKKESAVNQLTTCLDYLSSTPQHPIFPDV 163
Query: 325 IEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNL 384
+ S++E + A T + + + S + P G
Sbjct: 164 ATAASRLRQAIPSLSEEFSYILAQRITQPNQ--GGVRWSWDAIIRTRSILGLNNLPGGRS 221
Query: 385 SFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPE 444
+ E L Q VP L+YG +P Q K + +A + GH H +
Sbjct: 222 QYLEMLKSIQ---VPTTLVYGDSSKLNRPEDLQQQKMTMTQAKRVFL-SGGHNLHIDAAA 277
Query: 445 VCSLCLL 451
+ +L
Sbjct: 278 ALASLIL 284
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 Length = 273 | Back alignment and structure |
|---|
Score = 82.8 bits (205), Expect = 4e-18
Identities = 49/305 (16%), Positives = 92/305 (30%), Gaps = 59/305 (19%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDED 204
++Y+ G + P++F G+ + + +E Q+ L + YR A D
Sbjct: 10 QIYYKDWG----SGQPIVFSHGWPLNADSWESQMIFLAAQGYRVIAHD------------ 53
Query: 205 PTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNS 264
G G +QPW+ +D + D + I+ + + G S
Sbjct: 54 ----------------RRGHGRSSQPWS---GNDMDTYADDLAQLIEHLDLRDAVLFGFS 94
Query: 265 LGGFVAV-YFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRK 323
GG Y V L++A P P +++ LP + +
Sbjct: 95 TGGGEVARYIGRHGTARVAKAGLISAVP-----PLMLKTEANPGGLPMEVFDGIRQASLA 149
Query: 324 LIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASI--MFAPQ 381
+ ++ + +++ AA +
Sbjct: 150 ---------DRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAF 200
Query: 382 GNLSFREALSRCQMNGVPICLIYGKEDPWVKPVW--GLQVKRQVPEAPYYEISPAGHCPH 439
F E L + VP +++G D V P+ G+ V + S A H
Sbjct: 201 SETDFTEDLKKID---VPTLVVHGDADQVV-PIEASGIASAALVKGSTLKIYSGAPHGLT 256
Query: 440 DEVPE 444
D +
Sbjct: 257 DTHKD 261
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* Length = 276 | Back alignment and structure |
|---|
Score = 81.7 bits (202), Expect = 1e-17
Identities = 39/288 (13%), Positives = 72/288 (25%), Gaps = 59/288 (20%)
Query: 160 PPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKN 219
P +L LPG+ Y+ +++L D+R +
Sbjct: 28 PAILLLPGWCHDHRVYKYLIQELDADFRVIVPN--------------------------- 60
Query: 220 FLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAA-CNP 278
G G + + ++ E V +S GG+V V P
Sbjct: 61 -WRGHGLSPSEVPD---FGYQEQVKDALEILDQLGVETFLPVSHSHGGWVLVELLEQAGP 116
Query: 279 HLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESI 338
+++ + L W ++ D + +
Sbjct: 117 ERAPRGIIMDWLMWAPKPDFAKSLTLLKDPERWREGTH--GLFDVWLDG-----HDEKRV 169
Query: 339 AEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIM--FAPQGNLSFREALSRCQMN 396
L + AD+ + S I + G+ A
Sbjct: 170 RHHLLEEMADYG---------------YDCWGRSGRVIEDAYGRNGSPMQMMANLTKTR- 213
Query: 397 GVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPE 444
PI I+ + Q P Y ++ H P +VP+
Sbjct: 214 --PIRHIFSQPTEPEYEKINSDFAEQHPWFSYAKLGGPTHFPAIDVPD 259
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} Length = 309 | Back alignment and structure |
|---|
Score = 81.3 bits (201), Expect = 3e-17
Identities = 47/325 (14%), Positives = 88/325 (27%), Gaps = 67/325 (20%)
Query: 139 WEWKPKF------NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKD-YRAWAI 191
+ + + + Y G + PVLFL G S+ + + + YRA A
Sbjct: 7 FPFAKRTVEVEGATIAYVDEG----SGQPVLFLHGNPTSSYLWRNIIPYVVAAGYRAVAP 62
Query: 192 DFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIK 251
D +G G S K ++ Y + + FI
Sbjct: 63 DLIGMGDS--------------------------AK-----PDIEYRLQDHVAYMDGFID 91
Query: 252 EVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPW 311
+ + + +V + G + + A NP V V + P P ++ P
Sbjct: 92 ALGLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFME-ALVPPALPMPSYEAMGPQLGPL 150
Query: 312 SGTFPLPASVRKLI-------EFIWQKISDPESIAEVLKQVYADHATNVDT-----VFTR 359
K++ E I ++ S++E Y + + R
Sbjct: 151 FRDLRTADVGEKMVLDGNFFVETILPEMGVVRSLSEAEMAAYRAPFPTRQSRLPTLQWPR 210
Query: 360 ILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQV 419
+ PA A + +P L + + +
Sbjct: 211 EVPIGGEPAFAEAEVLKNGEWLMASP------------IPKLLFHAEPGALAPKPVVDYL 258
Query: 420 KRQVPEAPYYEISPAGHCPHDEVPE 444
VP + H ++ P
Sbjct: 259 SENVPNLEVRFVGAGTHFLQEDHPH 283
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A Length = 255 | Back alignment and structure |
|---|
Score = 78.6 bits (194), Expect = 9e-17
Identities = 45/299 (15%), Positives = 92/299 (30%), Gaps = 62/299 (20%)
Query: 148 HYEKAGCENV-NSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPT 206
+ +N N+ P++ + G + +DL D+ +D G+S
Sbjct: 4 NIRAQTAQNQHNNSPIVLVHGLFGSLDNLGVLARDLVNDHNIIQVDVRNHGLS------- 56
Query: 207 PRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLG 266
P + Y + QD + + + + +G+S+G
Sbjct: 57 -----------------------PREPVMNYP-AMAQD-LVDTLDALQIDKATFIGHSMG 91
Query: 267 GFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIE 326
G + A P + + ++ P A I + + ++
Sbjct: 92 GKAVMALTALAPDRIDKLVAIDIAP--VDYHVRRHDEIFAAINAV--SESDAQTRQQAAA 147
Query: 327 FIWQKISDPESIAEVLKQVYADH-ATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLS 385
+ Q +++ I +LK NV +++ ++
Sbjct: 148 IMRQHLNEEGVIQFLLKSFVDGEWRFNVP---------------------VLWDQYPHIV 186
Query: 386 FREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPE 444
E + P I G P+V + + Q P+A + I+ AGH H E P+
Sbjct: 187 GWEKIPAWD---HPALFIPGGNSPYVSEQYRDDLLAQFPQARAHVIAGAGHWVHAEKPD 242
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} Length = 330 | Back alignment and structure |
|---|
Score = 79.4 bits (196), Expect = 1e-16
Identities = 48/318 (15%), Positives = 84/318 (26%), Gaps = 64/318 (20%)
Query: 145 FNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKD--YRAWAIDFLGQGMSLPD 202
V + ++ P++ L G + +Y + L + D +G G S
Sbjct: 42 VQVTTPENA--QPHALPLIVLHGGPGMAHNYVANIAALADETGRTVIHYDQVGCGNSTHL 99
Query: 203 EDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR-----EP 257
D ++ L+ D+ + E
Sbjct: 100 PDAPAD---------------------------FWTPQLFVDEF-----HAVCTALGIER 127
Query: 258 VYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPL 317
+V+G S GG + A P + + + N+ + L
Sbjct: 128 YHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLWS-----EAAGDLRA-----QL 177
Query: 318 PASVRKLI-EFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASI 376
PA R + + + Y H V ++ A +
Sbjct: 178 PAETRAALDRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDFADSVAQMEAEPTVYHT 237
Query: 377 M-----FAPQGNL---SFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPY 428
M F G L S + L P+ +I G+ D P +P+
Sbjct: 238 MNGPNEFHVVGTLGDWSVIDRLPDVT---APVLVIAGEHDE-ATPKTWQPFVDHIPDVRS 293
Query: 429 YEISPAGHCPHDEVPEVC 446
+ HC H E PE
Sbjct: 294 HVFPGTSHCTHLEKPEEF 311
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A Length = 306 | Back alignment and structure |
|---|
Score = 78.9 bits (195), Expect = 2e-16
Identities = 42/319 (13%), Positives = 86/319 (26%), Gaps = 76/319 (23%)
Query: 148 HYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTP 207
G + PP+L L GF + + L + ++ D G G S
Sbjct: 26 FARVGG----DGPPLLLLHGFPQTHVMWHRVAPKLAERFKVIVADLPGYGWS-------- 73
Query: 208 RSKEGDSTEEKNFLWGFGDKAQPWASELAYSVD-LWQDQVCYFIKEVIR----EPVYVVG 262
D + Y+ + + + E + + G
Sbjct: 74 ------------------DMPESDEQHTPYTKRAMAKQLI-----EAMEQLGHVHFALAG 110
Query: 263 NSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTF----PLP 318
++ G V+ A +P + + +L+ P + + R+ A + PLP
Sbjct: 111 HNRGARVSYRLALDSPGRLSKLAVLDILPTYEYWQRMNRAY--ALKIYHWSFLAQPAPLP 168
Query: 319 -----ASVRKLIEFIWQKIS---DPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAA 370
++ + D + + Y + P
Sbjct: 169 ENLLGGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFAD--------------PMRR 214
Query: 371 -ASF----ASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE 425
A + + EA ++ + P+ ++G L V R+
Sbjct: 215 HVMCEDYRAGAYADFEHDKIDVEAGNKIPV---PMLALWGASGIAQSAATPLDVWRKWAS 271
Query: 426 APYYEISPAGHCPHDEVPE 444
+GH +E P+
Sbjct: 272 DVQGAPIESGHFLPEEAPD 290
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 Length = 274 | Back alignment and structure |
|---|
Score = 77.8 bits (192), Expect = 3e-16
Identities = 49/313 (15%), Positives = 92/313 (29%), Gaps = 72/313 (23%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDED 204
+ Y+ G PV+F+ G+ + ++ QLK + YR A D G G S
Sbjct: 10 EIFYKDWG----QGRPVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRGHGHS----- 60
Query: 205 PTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNS 264
W Y D + D + + ++ V +V +S
Sbjct: 61 -----------------------TPVWD---GYDFDTFADDLNDLLTDLDLRDVTLVAHS 94
Query: 265 LGGFVAV-YFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRK 323
+GG Y ++ LL+A P P I+S K P
Sbjct: 95 MGGGELARYVGRHGTGRLRSAVLLSAIP-----PVMIKSDK----------NPDGVPDEV 139
Query: 324 LIEFIWQKISD-PESIAEVLKQVYADHATNVDT------VFTRILETTQHPAAAASFASI 376
+++ + + + ++ + F + +
Sbjct: 140 FDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAF 199
Query: 377 MFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVW--GLQVKRQVPEAPYYEISPA 434
F E L + +P +++G +D V P+ G + + +P A +
Sbjct: 200 G-----YTDFTEDLKKFD---IPTLVVHGDDDQVV-PIDATGRKSAQIIPNAELKVYEGS 250
Query: 435 GHCPH--DEVPEV 445
H E
Sbjct: 251 SHGIAMVPGDKEK 263
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} Length = 330 | Back alignment and structure |
|---|
Score = 77.9 bits (192), Expect = 5e-16
Identities = 52/303 (17%), Positives = 90/303 (29%), Gaps = 58/303 (19%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDP 205
+ + G ++P V+FL G G + ++ + LG A A+D G G
Sbjct: 71 AISALRWG---GSAPRVIFLHGGGQNAHTWDTVIVGLG--EPALAVDLPGHG-------- 117
Query: 206 TPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSL 265
S W + YS L + + ++E+ +VVG SL
Sbjct: 118 -------HS---------------AWREDGNYSPQLNSETLAPVLRELAPGAEFVVGMSL 155
Query: 266 GGFVAVYFAACNPHLVKGVTLLNATPFW-GFSPNPIRSPK-LARILPWSGTFPLPASVRK 323
GG A+ AA P LV + L++ TP + ++ FP ++
Sbjct: 156 GGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAEQRGTVALMHGEREFPSFQAMLD 215
Query: 324 LIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGN 383
L V + + A +F
Sbjct: 216 LTIAAAPHRDVKSLRRGVFHNSRR----LDNGNWVW------RYDAIRTFGDFA------ 259
Query: 384 LSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISP-AGHCPHDEV 442
+ + PI L+ G +V ++ R+ I +GH +
Sbjct: 260 -GLWDDVDALS---APITLVRGGSSGFVTDQDTAELHRRATHFRGVHIVEKSGHSVQSDQ 315
Query: 443 PEV 445
P
Sbjct: 316 PRA 318
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 1cqw_A 2v9z_A Length = 299 | Back alignment and structure |
|---|
Score = 76.5 bits (189), Expect = 1e-15
Identities = 59/324 (18%), Positives = 99/324 (30%), Gaps = 66/324 (20%)
Query: 139 WEWKPKF------NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAID 192
+ + P + +HY G + PVLFL G S+ + + + +R A D
Sbjct: 8 FPFDPHYVEVLGERMHYVDVGPRD--GTPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPD 65
Query: 193 FLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKE 252
+G G S DK P +L Y D + FI+
Sbjct: 66 LIGMGKS--------------------------DK--P---DLDYFFDDHVRYLDAFIEA 94
Query: 253 VIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNA---TPFWGFSPNPIRSPKLARIL 309
+ E V +V + G + ++A NP VKG+ + P W P R A
Sbjct: 95 LGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPEFARETFQAFRT 154
Query: 310 PWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAA 369
G + + + + + P + EV Y
Sbjct: 155 ADVGRELIIDQNAFIEGALPKCVVRPLT--EVEMDHY-----------REPFLKPVDREP 201
Query: 370 AASFAS---IMFAPQGNL----SFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQ 422
F + I P + ++ L + VP L +G + P ++
Sbjct: 202 LWRFPNELPIAGEPANIVALVEAYMNWLHQSP---VPKLLFWGTPGVLIPPAEAARLAES 258
Query: 423 VPEAPYYEISPAGH-CPHDEVPEV 445
+P +I P H D +
Sbjct: 259 LPNCKTVDIGPGLHYLQEDNPDLI 282
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 Length = 264 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 1e-15
Identities = 43/309 (13%), Positives = 87/309 (28%), Gaps = 73/309 (23%)
Query: 145 FNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDE 203
+H+ K +P V+ + G ++ L L A +D G G +
Sbjct: 5 NQLHFAKPT---ARTPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHGTN---- 57
Query: 204 DPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKE--VIREPVYVV 261
P + + + ++ PV +V
Sbjct: 58 --------------------------PERH--CDNFAEAVEMIEQTVQAHVTSEVPVILV 89
Query: 262 GNSLGGFVAVYFAACNPHLV-KGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPAS 320
G SLGG + ++ A + +G N + AR
Sbjct: 90 GYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEK---AARW----------QH 136
Query: 321 VRKLIEFIWQKISDPESIAEVLKQVYAD--HATNVDTVFTRILET--TQHPAAAASFASI 376
++ + + I VL Y ++ ++ ++ A +
Sbjct: 137 DQQWAQRF-----SQQPIEHVLSDWYQQAVFSSLNHEQRQTLIAQRSANLGSSVA--HML 189
Query: 377 MFAPQGNL-SFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAG 435
+ AL +PI + G++D + + + Y +++ AG
Sbjct: 190 LATSLAKQPYLLPALQAL---KLPIHYVCGEQDSKFQQL------AESSGLSYSQVAQAG 240
Query: 436 HCPHDEVPE 444
H H E P+
Sbjct: 241 HNVHHEQPQ 249
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} Length = 286 | Back alignment and structure |
|---|
Score = 75.5 bits (186), Expect = 2e-15
Identities = 49/300 (16%), Positives = 92/300 (30%), Gaps = 51/300 (17%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGF-GVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDED 204
++ E G V P + L G G ++ + L+D + +R D G G
Sbjct: 14 ELYVEDVG--PVEGPALFVLHGGPGGNAYVLREGLQDYLEGFRVVYFDQRGSG------- 64
Query: 205 PTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNS 264
RS E ++VD + + + E ++ +
Sbjct: 65 ---RSLELPQDPR------------------LFTVDALVEDTLLLAEALGVERFGLLAHG 103
Query: 265 LGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKL 324
G VA+ P + L F + + LA LP A R+
Sbjct: 104 FGAVVALEVLRRFPQAEGAILLAPWVNFPWLAARLAEAAGLAP-LPDPEENLKEALKREE 162
Query: 325 IEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNL 384
+ ++ ++ P + + A+ A A +F L
Sbjct: 163 PKALFDRLMFPTPRGRMAYEWLAEGAG-----------ILGSDAPGLAFLRNGLW---RL 208
Query: 385 SFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPE 444
+ L+ + P+ ++ G+ D + +V + AP + AGH + PE
Sbjct: 209 DYTPYLTPER---RPLYVLVGERD-GTSYPYAEEVASR-LRAPIRVLPEAGHYLWIDAPE 263
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} Length = 297 | Back alignment and structure |
|---|
Score = 75.2 bits (185), Expect = 3e-15
Identities = 55/323 (17%), Positives = 90/323 (27%), Gaps = 64/323 (19%)
Query: 139 WEWKPKF----------NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKD-YR 187
+ + P + +HY G + L L G SF Y K L R
Sbjct: 17 FPYAPHYLEGLPGFEGLRMHYVDEGPRD-AEHTFLCLHGEPSWSFLYRKMLPVFTAAGGR 75
Query: 188 AWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVC 247
A D G G S DK + Y+ + +
Sbjct: 76 VVAPDLFGFGRS--------------------------DKP---TDDAVYTFGFHRRSLL 106
Query: 248 YFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSP--KL 305
F+ + E V +V GG + + P LV + ++N G SP
Sbjct: 107 AFLDALQLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVGLSPGKGFESWRDF 166
Query: 306 ARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQ 365
P V KL++ I+D + A R +
Sbjct: 167 VANSPD-------LDVGKLMQRAIPGITD-----AEVAAYDAPFPGPEFKAGVR-----R 209
Query: 366 HPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE 425
PA + A G + ++ P + G +DP + P +++ +
Sbjct: 210 FPAIVPITPDMEGAEIGRQAMSFWSTQWS---GPTFMAVGAQDPVLGPEVMGMLRQAIRG 266
Query: 426 APYYEISP-AGHCPHDEVPEVCS 447
P I GH + +
Sbjct: 267 CPEPMIVEAGGHFVQEHGEPIAR 289
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A Length = 276 | Back alignment and structure |
|---|
Score = 74.6 bits (184), Expect = 3e-15
Identities = 52/304 (17%), Positives = 91/304 (29%), Gaps = 55/304 (18%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDED 204
+ Y+ G ++P + F G+ + + ++ QL YR A D
Sbjct: 11 QIFYKDWG--PRDAPVIHFHHGWPLSADDWDAQLLFFLAHGYRVVAHDR----------- 57
Query: 205 PTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNS 264
R G G +Q W + +D + D V + + + VG+S
Sbjct: 58 ---R--------------GHGRSSQVWD---GHDMDHYADDVAAVVAHLGIQGAVHVGHS 97
Query: 265 LGGFVAVYFAACNP-HLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRK 323
GG V + A +P V L+ A P P +++P LP S A V
Sbjct: 98 TGGGEVVRYMARHPEDKVAKAVLIAAVP-----PLMVQTPGNPGGLPKSVFDGFQAQVAS 152
Query: 324 LIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASI--MFAPQ 381
+ +V + + I+ S +
Sbjct: 153 NR---------AQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAKAHYDGIVAF 203
Query: 382 GNLSFREALSRCQMNGVPICLIYGKEDPWVKPVW-GLQVKRQVPEAPYYEISPAGHCPHD 440
F E L Q P+ +++G +D V G+ + +P H
Sbjct: 204 SQTDFTEDLKGIQ---QPVLVMHGDDDQIVPYENSGVLSAKLLPNGALKTYKGYPHGMPT 260
Query: 441 EVPE 444
+
Sbjct: 261 THAD 264
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A Length = 293 | Back alignment and structure |
|---|
Score = 74.5 bits (184), Expect = 4e-15
Identities = 46/309 (14%), Positives = 101/309 (32%), Gaps = 49/309 (15%)
Query: 145 FNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKD-YRAWAIDFLGQGMSLPDE 203
++Y+ ++ + G S Y L+D+ K+ D G G
Sbjct: 15 IYIYYKLCK-APEEKAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCG------ 67
Query: 204 DPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKE-VIREPVYVVG 262
RS+E D ++ +++D ++ + E V+++G
Sbjct: 68 ----RSEEPDQSK--------------------FTIDYGVEEAEALRSKLFGNEKVFLMG 103
Query: 263 NSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVR 322
+S GG +A+ +A +KG+ + P ++ + R++ LPA R
Sbjct: 104 SSYGGALALAYAVKYQDHLKGLIVSGGLS---SVPLTVKE--MNRLID-----ELPAKYR 153
Query: 323 KLIEFIWQK-ISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIM---- 377
I+ + E + Y H + +L++ ++ + +
Sbjct: 154 DAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNE 213
Query: 378 FAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHC 437
F G + + + +P + G+ D V P + ++ + + H
Sbjct: 214 FTITGTIKDWDITDKISAIKIPTLITVGEYD-EVTPNVARVIHEKIAGSELHVFRDCSHL 272
Query: 438 PHDEVPEVC 446
E E
Sbjct: 273 TMWEDREGY 281
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P Length = 316 | Back alignment and structure |
|---|
Score = 74.9 bits (184), Expect = 4e-15
Identities = 41/306 (13%), Positives = 85/306 (27%), Gaps = 55/306 (17%)
Query: 148 HYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKD--YRAWAIDFLGQGMSLPDEDP 205
K+G E P +L L G G + + + R A+D G +
Sbjct: 30 RVYKSGSE---GPVLLLLHGGGHSALSWAVFTAAIISRVQCRIVALDLRSHGET------ 80
Query: 206 TPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV---IREPVYVVG 262
+ S + V ++ + + P+ ++G
Sbjct: 81 ------------------------KVKNPEDLSAETMAKDVGNVVEAMYGDLPPPIMLIG 116
Query: 263 NSLGGFVAVYFAACN-PHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLP-AS 320
+S+GG +AV+ A+ N + G+ +++ L + + P S
Sbjct: 117 HSMGGAIAVHTASSNLVPSLLGLCMIDVVE-------GTAMDALNSMQNFLRGRPKTFKS 169
Query: 321 VRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIM-FA 379
+ IE+ K ++ + + A +
Sbjct: 170 LENAIEW-SVKSGQIRNLESARVSMVGQVKQCEGITSPEGSKKDHPYTWRIELAKTEKYW 228
Query: 380 PQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPH 439
C +P L+ D K L + + + + GH H
Sbjct: 229 DGWFRGLSNLFLSCP---IPKLLLLAGVDRLDKD---LTIGQMQGKFQMQVLPQCGHAVH 282
Query: 440 DEVPEV 445
++ P+
Sbjct: 283 EDAPDK 288
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A Length = 297 | Back alignment and structure |
|---|
Score = 73.2 bits (180), Expect = 1e-14
Identities = 48/324 (14%), Positives = 93/324 (28%), Gaps = 63/324 (19%)
Query: 138 FWEWKPKF------NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAI 191
+PK+ + Y G ++F G S+ + + L R A
Sbjct: 5 EPYGQPKYLEIAGKRMAYIDEG----KGDAIVFQHGNPTSSYLWRNIMPHLEGLGRLVAC 60
Query: 192 DFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIK 251
D +G G S DK P + YS +D +
Sbjct: 61 DLIGMGAS--------------------------DKLSPSGPD-RYSYGEQRDFLFALWD 93
Query: 252 EV-IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPF-WGFSPNPIRSPKLARIL 309
+ + + V +V + G + +A + V+G+ + A ++ P + +
Sbjct: 94 ALDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWADWPPAVRGVFQGF 153
Query: 310 PWSGTFPLPASVRKLIEFIWQ-----KISDPESIAEVLKQVYADHATNVDTV--FTRILE 362
P+ +E + ++SD E ++ + + + + R L
Sbjct: 154 RSPQGEPMALEHNIFVERVLPGAILRQLSDEE--MNHYRRPFVNGGEDRRPTLSWPRNLP 211
Query: 363 TTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQ 422
PA + + +R L M P I + + R
Sbjct: 212 IDGEPAEVVALVN---------EYRSWLEETDM---PKLFINAEPGAIITGRI-RDYVRS 258
Query: 423 VPEAPYYEISPAGH-CPHDEVPEV 445
P + P H D E+
Sbjct: 259 WPNQTEITV-PGVHFVQEDSPEEI 281
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* Length = 316 | Back alignment and structure |
|---|
Score = 73.1 bits (180), Expect = 1e-14
Identities = 45/307 (14%), Positives = 86/307 (28%), Gaps = 44/307 (14%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDP 205
++ Y + G ++ +P VLFL G S + L + A D +G G S
Sbjct: 18 SMAYRETGAQD--APVVLFLHGNPTSSHIWRNILPLVSPVAHCIAPDLIGFGQS------ 69
Query: 206 TPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSL 265
K P ++AY + FI++ Y+V
Sbjct: 70 --------------------GK--P---DIAYRFFDHVRYLDAFIEQRGVTSAYLVAQDW 104
Query: 266 GGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLI 325
G +A + AA P V+G+ + + + + R
Sbjct: 105 GTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEAARAVFRKFRTPG 164
Query: 326 EFIWQKISDPESIAEVLKQVYADHATNVD-TVFTRILETTQHPAAAASFASIMF------ 378
E + + VL + + + T + +F +
Sbjct: 165 EGEAMILEANAFVERVLPGGIVRKLGDEEMAPYRTPFPTPESRRPVLAFPRELPIAGEPA 224
Query: 379 -APQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHC 437
+ S AL+ P L G+ V P + + + + H
Sbjct: 225 DVYEALQSAHAALAASS---YPKLLFTGEPGALVSPEFAERFAASLTRCALIRLGAGLHY 281
Query: 438 PHDEVPE 444
++ +
Sbjct: 282 LQEDHAD 288
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} Length = 291 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 3e-14
Identities = 62/320 (19%), Positives = 99/320 (30%), Gaps = 82/320 (25%)
Query: 148 HYEKAGCENVNSPPVLFLPGFGVGSFHYE--KQLKDLGKDYRAWAIDFLGQGMSLPDEDP 205
+ KAG + P+L L G+ H K L ++ A D G G S
Sbjct: 18 NLVKAG----HGAPLLLLHGYP--QTHVMWHKIAPLLANNFTVVATDLRGYGDS------ 65
Query: 206 TPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVD-LWQDQVCYFIKEVIR----EPVYV 260
+ + YS + QDQV EV+ E YV
Sbjct: 66 --------------------SRPASVPHHINYSKRVMAQDQV-----EVMSKLGYEQFYV 100
Query: 261 VGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTF----- 315
VG+ G VA A +PH VK + LL+ P + A + F
Sbjct: 101 VGHDRGARVAHRLALDHPHRVKKLALLDIAPTHKMYRTTDQEFATAY---YHWFFLIQPD 157
Query: 316 PLP-----ASVRKLIEFIWQKIS-DPESIAEVLKQVYADHATNVDTVFTRILETTQHPAA 369
LP A+ + +K D + Y + PA
Sbjct: 158 NLPETLIGANPEYYLRKCLEKWGKDFSAFHPQALAEYIRCFSQ--------------PAV 203
Query: 370 AASFASIMF-----APQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP 424
+ A +L E + +++ P+ +++G++ + L R+
Sbjct: 204 IHA----TCEDYRAAATIDLEHDELDMKQKIS-CPVLVLWGEKGIIGRKYDVLATWRERA 258
Query: 425 EAPYYEISPAGHCPHDEVPE 444
+ P GH +E PE
Sbjct: 259 IDVSGQSLPCGHFLPEEAPE 278
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 Length = 294 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 4e-13
Identities = 58/318 (18%), Positives = 89/318 (27%), Gaps = 77/318 (24%)
Query: 148 HYEKAGCENVNSPPVLFLPGFGVGSFHYE--KQLKDLGKDYRAWAIDFLGQGMSLPDEDP 205
HY + G P +L L G+ F +E K + L + Y D L
Sbjct: 22 HYVREG----AGPTLLLLHGWP--GFWWEWSKVIGPLAEHYDVIVPD-------LR---- 64
Query: 206 TPRSKEGDSTEEKNFLWGFGDKAQPWASEL-AYSVD-LWQDQVCYFIKEVIR----EPVY 259
GFGD +P ++L YS+D DQ ++ E Y
Sbjct: 65 -----------------GFGDSEKPDLNDLSKYSLDKAADDQA-----ALLDALGIEKAY 102
Query: 260 VVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWS---GTFP 316
VVG+ V F V + + P+ + S
Sbjct: 103 VVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQ-----PDFGPVYFGLGHVHESWYSQFHQ 157
Query: 317 LPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILET-----TQHPAAAA 371
L +E + S E + K + + + + LE +
Sbjct: 158 LD----MAVEVV---GSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHG 210
Query: 372 SF----ASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVK-PVWGLQVKRQVPEA 426
F A+I +S P+ +I+G D V V +
Sbjct: 211 GFNYYRANIRPDAALWTDLDHTMSDL-----PVTMIWGLGDTCVPYAPLIEFVPKYYSNY 265
Query: 427 PYYEISPAGHCPHDEVPE 444
I GH E PE
Sbjct: 266 TMETIEDCGHFLMVEKPE 283
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A Length = 318 | Back alignment and structure |
|---|
Score = 68.6 bits (168), Expect = 5e-13
Identities = 41/333 (12%), Positives = 93/333 (27%), Gaps = 55/333 (16%)
Query: 123 PDEYNGESGAPITSCFWEWKPKF------NVHYEKAGCENVNSPPVLFLPGFGVGSFHYE 176
P++ P W + K ++Y + V+FL G S+ +
Sbjct: 7 PEQRKRMITGPQ----WWARCKQMNVLDSFINYYDSEKHA--ENAVIFLHGNATSSYLWR 60
Query: 177 KQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELA 236
+ + R D +G G S K+ +
Sbjct: 61 HVVPHIEPVARCIIPDLIGMGKS--------------------------GKSGNGS---- 90
Query: 237 YSVDLWQDQVCYFIKEV-IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGF 295
Y + + + + + + + + VG+ G +A ++A + +K + + +
Sbjct: 91 YRLLDHYKYLTAWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIE 150
Query: 296 SPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKI--SDPESIAEVLKQVYADHATNV 353
S + P + + + V + F+ + + Y +
Sbjct: 151 SWDEW--PDIEEDIALIKSEEGEKMVLENNFFVETVLPSKIMRKLEPEEFAAYLEPFK-- 206
Query: 354 DTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKP 413
+ R T P + A R + +P I DP
Sbjct: 207 EKGEVRRP-TLSWPREIPLVKGGKPDVVQIVRNYNAYLRASDD-LPKLFIES--DPGFFS 262
Query: 414 VWGLQVKRQVPEAPYYEISPAGH-CPHDEVPEV 445
++ ++ P + ++ H D E+
Sbjct: 263 NAIVEGAKKFPNTEFVKV-KGLHFLQEDAPDEM 294
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A Length = 302 | Back alignment and structure |
|---|
Score = 68.3 bits (167), Expect = 6e-13
Identities = 45/307 (14%), Positives = 84/307 (27%), Gaps = 54/307 (17%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDP 205
+ Y G P+LF G S+ + + R A D +G G S
Sbjct: 20 RMAYIDEG----TGDPILFQHGNPTSSYLWRNIMPHCAGLGRLIACDLIGMGDS------ 69
Query: 206 TPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV-IREPVYVVGNS 264
DK P + Y+ +D + + + + + V +V +
Sbjct: 70 --------------------DKLDP-SGPERYAYAEHRDYLDALWEALDLGDRVVLVVHD 108
Query: 265 LGGFVAVYFAACNPHLVKGVTLLNATPF---WGFSPNPIRSPKLARILPW--SGTFPLPA 319
G + +A + V+G+ + A W P R A
Sbjct: 109 WGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQAGEELVLQDNV 168
Query: 320 SVRKLIE-FIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMF 378
V +++ I + +S+ E A Y + L P +
Sbjct: 169 FVEQVLPGLILRPLSEAEMAA------YREPFLAAGEARRPTLSW---PRQIPIAGTPAD 219
Query: 379 APQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQ-VKRQVPEAPYYEISPAGHC 437
+ LS + P I + ++ R P + H
Sbjct: 220 VVAIARDYAGWLSESPI---PKLFINAEPGAL--TTGRMRDFCRTWPNQTEITV-AGAHF 273
Query: 438 PHDEVPE 444
++ P+
Sbjct: 274 IQEDSPD 280
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A Length = 304 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 7e-13
Identities = 48/316 (15%), Positives = 78/316 (24%), Gaps = 73/316 (23%)
Query: 148 HYEKAGCENVNSPPVLFLPGFGVGSFHYE--KQLKDLGKDYRAWAIDFLGQGMSLPDEDP 205
+ G + P +L L GF + + L +Y D G G S
Sbjct: 18 NCVVGG----SGPALLLLHGF--PQNLHMWARVAPLLANEYTVVCADLRGYGGS------ 65
Query: 206 TPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVD-LWQDQVCYFIKEVIR----EPVYV 260
K YS + DQ E++R E ++
Sbjct: 66 --------------------SKPVGAPDHANYSFRAMASDQR-----ELMRTLGFERFHL 100
Query: 261 VGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPAS 320
VG++ GG A +P V + +L+ + W
Sbjct: 101 VGHARGGRTGHRMALDHPDSVLSLAVLDI-IPTYVMFEEVDRFVARAYWHWYFLQQPAPY 159
Query: 321 VRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFT-----RILETTQHPAAAAS--- 372
K+I +DP+ + F + + PAA
Sbjct: 160 PEKVIG------ADPD---TFYEGCLFGWGATGADGFDPEQLEEYRKQWRDPAAIHGSCC 210
Query: 373 ----FASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPY 428
+I F + + Q P + G V
Sbjct: 211 DYRAGGTIDFELDH----GDLGRQVQC---PALVFSGSAGLMHSLFEMQVVWAPRLANMR 263
Query: 429 YEISPAGHCPHDEVPE 444
+ P GH D P+
Sbjct: 264 FASLPGGHFFVDRFPD 279
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 Length = 210 | Back alignment and structure |
|---|
Score = 66.5 bits (162), Expect = 8e-13
Identities = 27/171 (15%), Positives = 46/171 (26%), Gaps = 33/171 (19%)
Query: 145 FNVHYEKAG-CENVNSPPVLFLPGFGVGSFHYE--KQLKDLGK-DYRAWAIDFLGQGMSL 200
+ + +A VL L G S ++ L L + YRA AID
Sbjct: 17 QALFFREALPGSGQARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAID-------- 68
Query: 201 PDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYV 260
L G G + A + + + P V
Sbjct: 69 --------------------LPGLGHSKEAAAPA-PIGELAPGSFLAAVVDALELGPPVV 107
Query: 261 VGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPW 311
+ SL G ++ F + G + + S K ++ +
Sbjct: 108 ISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDKINAANYASVKTPALIVY 158
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A Length = 301 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 2e-12
Identities = 48/320 (15%), Positives = 88/320 (27%), Gaps = 84/320 (26%)
Query: 148 HYEKAGCENVNSPPVLFLPGFGVGSFHYE--KQLKDLGKDYRAWAIDFLGQGMSLPDEDP 205
HY K G P V+ + GFG YE + + +L K + A D G G S +P
Sbjct: 23 HYVKGG----QGPLVMLVHGFG--QTWYEWHQLMPELAKRFTVIAPDLPGLGQS----EP 72
Query: 206 TPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVD-LWQDQVCYFIKEVIR-----EPVY 259
YS + + ++ R P
Sbjct: 73 PKT---------------------------GYSGEQVAVYLH-----KLARQFSPDRPFD 100
Query: 260 VVGNSLGGFVAVYFAACNPHLVKGVTLLNA-TPFWGFSPNPIRSPKLARILPWSGTF--- 315
+V + +G + N + + + A P P + + ++ F
Sbjct: 101 LVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPAFTAQGESLVWHFSFFAAD 160
Query: 316 -PLP-----ASVRKLIEFIWQKIS-DPESIAEVLKQVYADHATNVDTVFTRILETTQHPA 368
L R +E + + + E +E L +YA P
Sbjct: 161 DRLAETLIAGKERFFLEHFIKSHASNTEVFSERLLDLYARSYAK--------------PH 206
Query: 369 AAASFASIMFAPQGNLSFREALSRCQMNG----VPICLIYGKEDPWVKPVWGLQVKRQVP 424
+ + F L ++ +P + G + Q+K
Sbjct: 207 SLNA----SFEYYRAL-NESVRQNAELAKTRLQMPTMTLAGGGAGGMGTFQLEQMKAYAE 261
Query: 425 EAPYYEISPAGHCPHDEVPE 444
+ + + GH +E
Sbjct: 262 DVEGHVLPGCGHWLPEECAA 281
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A Length = 310 | Back alignment and structure |
|---|
Score = 65.2 bits (159), Expect = 7e-12
Identities = 46/327 (14%), Positives = 91/327 (27%), Gaps = 65/327 (19%)
Query: 139 WEWKPKF----------NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKD-YR 187
+ + P + HY G + L L G S+ Y K + + R
Sbjct: 18 YPFSPNYLDDLPGYPGLRAHYLDEGNSDAE-DVFLCLHGEPTWSYLYRKMIPVFAESGAR 76
Query: 188 AWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVC 247
A DF G G S + P Y+ + ++ +
Sbjct: 77 VIAPDFFGFGKS---DKPVDEE--------------------------DYTFEFHRNFLL 107
Query: 248 YFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLA- 306
I+ + + +V GGF+ + +P K + ++NA P S +
Sbjct: 108 ALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQPAFSAFVTQ 167
Query: 307 -----RILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDT-VFTRI 360
+ P + + ++ +++ E A + D + F ++
Sbjct: 168 PADGFTAWKYDLVTPSDLRLDQFMKRWAPTLTEAE--ASAYAAPFPDTSYQAGVRKFPKM 225
Query: 361 LETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVK 420
+ S + + + G +D + P +K
Sbjct: 226 VAQRDQAXIDIS----------TEAISFWQNDWN---GQTFMAIGMKDKLLGPDVMYPMK 272
Query: 421 RQVPEAPYY-EISPAGH-CPHDEVPEV 445
+ P EI+ AGH
Sbjct: 273 ALINGCPEPLEIADAGHFVQEFGEQVA 299
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} Length = 264 | Back alignment and structure |
|---|
Score = 64.1 bits (156), Expect = 1e-11
Identities = 32/306 (10%), Positives = 66/306 (21%), Gaps = 70/306 (22%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDP 205
+ Y ++G + ++P + L G+ ++ L +D+ D
Sbjct: 10 LMTYSESG--DPHAPTLFLLSGWCQDHRLFKNLAPLLARDFHVICPD------------- 54
Query: 206 TPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSL 265
G K + + FI +V S
Sbjct: 55 ---------------WRGHDAKQTDSGD---FDSQTLAQDLLAFIDAKGIRDFQMVSTSH 96
Query: 266 GGFVAVYFAA-CNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKL 324
G +V + + +++ P P ++L
Sbjct: 97 GCWVNIDVCEQLGAARLPKTIIIDWLL-----------------------QPHPGFWQQL 133
Query: 325 IEFIWQKISDPESIAEVLKQVYADHATNVDT-----VFTRILETTQHPAAAASFASIMFA 379
E P + + + A D + + I
Sbjct: 134 AEGQ-----HPTEYVAGRQSFFDEWAETTDNADVLNHLRNEMPWFHGEMWQRACREIEAN 188
Query: 380 PQGNLSFREALSRCQMNGVPICLIYGKEDPWVKP-VWGLQVKRQVPEAPYYEISPAGHCP 438
+ S + + + P + L+ I H P
Sbjct: 189 YRTWGSPLDRMDS--LPQKPEICHIYSQPLSQDYRQLQLEFAAGHSWFHPRHIPGRTHFP 246
Query: 439 HDEVPE 444
E P
Sbjct: 247 SLENPV 252
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* Length = 264 | Back alignment and structure |
|---|
Score = 62.6 bits (152), Expect = 3e-11
Identities = 42/293 (14%), Positives = 79/293 (26%), Gaps = 46/293 (15%)
Query: 158 NSPPVLFLPGFGVGSFHYEKQLKDLGKD-YRAWAIDFLGQGMSLPDEDPTPRSKEGDSTE 216
+ + G +G++ + K L ++ A+D G++ D
Sbjct: 9 QQKHFVLVHGGCLGAWIWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIH--------- 59
Query: 217 EKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAAC 276
F D ++P +A E V ++G+S GG
Sbjct: 60 ------TFRDYSEPLMEVMASIPPD--------------EKVVLLGHSFGGMSLGLAMET 99
Query: 277 NPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPE 336
P + ++A P+P S ++ P + +
Sbjct: 100 YPEKISVAVFMSA-----MMPDPNHSL-TYPFEKYNEKCPADMMLDSQFSTYGNPENPGM 153
Query: 337 SIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMN 396
S+ + + N + + P + +L+ + S +
Sbjct: 154 SMILGPQFMALKMFQNCSVEDLELAKMLTRPGS---------LFFQDLAKAKKFSTERYG 204
Query: 397 GVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVP-EVCSL 448
V I+ ED + V EI A H P EVC
Sbjct: 205 SVKRAYIFCNEDKSFPVEFQKWFVESVGADKVKEIKEADHMGMLSQPREVCKC 257
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} Length = 207 | Back alignment and structure |
|---|
Score = 61.0 bits (148), Expect = 6e-11
Identities = 21/157 (13%), Positives = 48/157 (30%), Gaps = 31/157 (19%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQ--LKDLGKD-YRAWAIDFLGQGMSLPD 202
V K ++ N + G+ S ++K + K Y +A D+ G G S
Sbjct: 15 RVFQRKMVTDS-NRRSIALFHGYSFTSMDWDKADLFNNYSKIGYNVYAPDYPGFGRS--- 70
Query: 203 EDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVG 262
++ + + + + + ++K ++G
Sbjct: 71 -----------------------ASSEKYGID-RGDLKHAAEFIRDYLKANGVARSVIMG 106
Query: 263 NSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNP 299
S+GG + + P +V G+ + +
Sbjct: 107 ASMGGGMVIMTTLQYPDIVDGIIAVAPAWVESLKGDM 143
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* Length = 356 | Back alignment and structure |
|---|
Score = 60.0 bits (145), Expect = 5e-10
Identities = 34/167 (20%), Positives = 52/167 (31%), Gaps = 31/167 (18%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDED 204
+H + P V+ L GF + + Q+ L YR AID G
Sbjct: 14 RIHAVADSPPDQQGPLVVLLHGFPESWYSWRHQIPALAGAGYRVVAIDQRG--------- 64
Query: 205 PTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNS 264
+G ++ + AY + V + E +VVG+
Sbjct: 65 -------------------YGRSSKYRVQK-AYRIKELVGDVVGVLDSYGAEQAFVVGHD 104
Query: 265 LGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPW 311
G VA FA +P GV ++ PF G + P
Sbjct: 105 WGAPVAWTFAWLHPDRCAGVVGISV-PFAGRGVIGLPGSPFGERRPS 150
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* Length = 328 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 5e-10
Identities = 56/344 (16%), Positives = 94/344 (27%), Gaps = 95/344 (27%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDED 204
N+H + G P +LF+ GF + + Q+ L + YRA A D G
Sbjct: 22 NMHLAELG----EGPTILFIHGFPELWYSWRHQMVYLAERGYRAVAPDLRG--------- 68
Query: 205 PTPRSKEGDSTEEKNFLWGFGDKAQPWASEL-AYSVD-LWQDQVCYFIKEVIR------E 256
+GD ++ +S+ L D + ++ E
Sbjct: 69 -------------------YGDTTGAPLNDPSKFSILHLVGD-----VVALLEAIAPNEE 104
Query: 257 PVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFP 316
V+VV + G +A + P VK + L+ F +P L I
Sbjct: 105 KVFVVAHDWGALIAWHLCLFRPDKVKALVNLSV-HFSKRNPKMNVVEGLKAIYGEDHYI- 162
Query: 317 LPASVRKLIEFIWQKISDPESIAEVLKQVY-----ADHATNVDTVFTRILETTQHPAAAA 371
R + + P VLK++ A I + ++
Sbjct: 163 ----SRFQVPGEIEAEFAPIGAKSVLKKILTYRDPAPFYFPKGKGLEAIPDAPVALSSWL 218
Query: 372 SFASIMFAPQGNLSFREALSRCQMNG------------------------VPICLIYGKE 407
S + + + + G VP I G+
Sbjct: 219 SEEELDY-------YANKFEQTGFTGAVNYYRALPINWELTAPWTGAQVKVPTKFIVGEF 271
Query: 408 DPWVKP------VWGLQVKRQVPEAPYYEISP-AGHCPHDEVPE 444
D + K+ VP + A H E P
Sbjct: 272 DLVYHIPGAKEYIHNGGFKKDVPLLEEVVVLEGAAHFVSQERPH 315
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* Length = 267 | Back alignment and structure |
|---|
Score = 57.7 bits (139), Expect = 1e-09
Identities = 37/290 (12%), Positives = 70/290 (24%), Gaps = 48/290 (16%)
Query: 152 AGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKD-YRAWAIDFLGQGMSLPDEDPTPRSK 210
+ + G++ + K + + + A+D G++ P
Sbjct: 5 KSMSPFVKKHFVLVHAAFHGAWCWYKIVALMRSSGHNVTALDLGASGINPKQALQIP--- 61
Query: 211 EGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVA 270
F D P +A E + +VG++LGG
Sbjct: 62 ------------NFSDYLSPLMEFMA--------------SLPANEKIILVGHALGGLAI 95
Query: 271 VYFAACNPHLVKGVTLLNAT-PFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIW 329
P + L+ P + + + +L +
Sbjct: 96 SKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENGPTNPPTTL 155
Query: 330 QKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREA 389
I+ P + L + D L P I
Sbjct: 156 --IAGP----KFLATNVYHLSPIEDLALATAL---VRPLYLYLAEDISKEV--------V 198
Query: 390 LSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPH 439
LS + V I E+ +K + + + P EI + H
Sbjct: 199 LSSKRYGSVKRVFIVATENDALKKEFLKLMIEKNPPDEVKEIEGSDHVTM 248
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* Length = 555 | Back alignment and structure |
|---|
Score = 59.1 bits (143), Expect = 1e-09
Identities = 51/345 (14%), Positives = 104/345 (30%), Gaps = 81/345 (23%)
Query: 133 PITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKD-YRAWAI 191
++ + KP+ +H+ + G + P V GF + + Q+ L + YR A+
Sbjct: 236 DMSHGYVTVKPRVRLHFVELG----SGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAM 291
Query: 192 DFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVD-LWQDQVCYFI 250
D G +G+ + P E Y ++ L ++ +
Sbjct: 292 DMKG----------------------------YGESSAPPEIE-EYCMEVLCKE-----M 317
Query: 251 KEVIR----EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFW--GFSPNPIRSPK 304
+ +G+ GG + Y A P V+ V LN TPF + +P+ S K
Sbjct: 318 VTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLN-TPFIPANPNMSPLESIK 376
Query: 305 LARI--------LPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTV 356
+ P L ++ + + +++ + +
Sbjct: 377 ANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLS--------MHKVCEAGGL 428
Query: 357 FTRILETTQHPAAA-----ASFASIMFAPQG---------NLSFREALSRCQMNG---VP 399
F E + F G N+ + + +P
Sbjct: 429 FVNSPEEPSLSRMVTEEEIQFYVQ-QFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIP 487
Query: 400 ICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPE 444
++ ++D + P ++ +P I GH + P
Sbjct: 488 ALMVTAEKDFVLVPQMSQHMEDWIPHLKRGHIEDCGHWTQMDKPT 532
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* Length = 273 | Back alignment and structure |
|---|
Score = 57.7 bits (139), Expect = 2e-09
Identities = 42/294 (14%), Positives = 76/294 (25%), Gaps = 48/294 (16%)
Query: 158 NSPPVLFLPGFGVGSFHYEKQLKDLGKD-YRAWAIDFLGQGMSLPDEDPTPRSKEGDSTE 216
+ + G G + + K L ++ A+D G L +
Sbjct: 3 EGKHFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEE----------- 51
Query: 217 EKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAAC 276
L D P + E V +VG+SLGG
Sbjct: 52 ----LRTLYDYTLPLMELME--------------SLSADEKVILVGHSLGGMNLGLAMEK 93
Query: 277 NPHLVKGVTLLNAT-PFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDP 335
P + L A P + + + R + E + P
Sbjct: 94 YPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGP 153
Query: 336 ESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQM 395
+ +A L Q+ + + + P++ LS + + +
Sbjct: 154 KFLAHKLYQLCSPED-------LALASSLVRPSSLFMED---------LSKAKYFTDERF 197
Query: 396 NGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVP-EVCSL 448
V I ED + + + EI A H P ++C+
Sbjct: 198 GSVKRVYIVCTEDKGIPEEFQRWQIDNIGVTEAIEIKGADHMAMLCEPQKLCAS 251
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A Length = 247 | Back alignment and structure |
|---|
Score = 56.3 bits (136), Expect = 4e-09
Identities = 29/178 (16%), Positives = 51/178 (28%), Gaps = 35/178 (19%)
Query: 158 NSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTE 216
VL L GF S + L Y A + G G+ + T
Sbjct: 15 GERAVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHT---------- 64
Query: 217 EKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAAC 276
W ++ + +++ E + V G SLGG ++
Sbjct: 65 ----------GPDDWWQDVMNGYEFLKNKGY--------EKIAVAGLSLGGVFSLKLGYT 106
Query: 277 NPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISD 334
P ++G+ + A P + S + L + + IE +K
Sbjct: 107 VP--IEGIVTMCA-PMYIKSEETMYEGVLEYAREY---KKREGKSEEQIEQEMEKFKQ 158
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... Length = 257 | Back alignment and structure |
|---|
Score = 52.8 bits (126), Expect = 5e-08
Identities = 36/282 (12%), Positives = 69/282 (24%), Gaps = 49/282 (17%)
Query: 160 PPVLFLPGFGVGSFHYEKQLKDLGKD-YRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEK 218
+ + G++ + K L ++ A+D G+
Sbjct: 4 AHFVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQI--------------- 48
Query: 219 NFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNP 278
+ F + ++P + L E V +VG S GG A
Sbjct: 49 EEIGSFDEYSEPLLTFLEALPPG--------------EKVILVGESCGGLNIAIAADKYC 94
Query: 279 HLVKGVTLLNAT-PFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPES 337
+ N+ P P+ + + W T K + I
Sbjct: 95 EKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFT--YTKDGKEITGLKLGFTL 152
Query: 338 IAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNG 397
+ E L L + A Q L+ R ++
Sbjct: 153 LRENLYT----------------LCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGS 196
Query: 398 VPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPH 439
+ ++ +D P + L Y++ H
Sbjct: 197 IKKIYVWTDQDEIFLPEFQLWQIENYKPDKVYKVEGGDHKLQ 238
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* Length = 251 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 2e-07
Identities = 24/137 (17%), Positives = 42/137 (30%), Gaps = 34/137 (24%)
Query: 158 NSPPVLFLPGF-----GVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEG 212
P + + GF ++ L ++G D G G S +G
Sbjct: 26 KCPLCIIIHGFTGHSEERHIVAVQETLNEIG--VATLRADMYGHGKS-----------DG 72
Query: 213 DSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVY 272
+ W + + VD Y K +Y+ G+S GG +
Sbjct: 73 KFEDH-----TLFK----WLTNILAVVD-------YAKKLDFVTDIYMAGHSQGGLSVML 116
Query: 273 FAACNPHLVKGVTLLNA 289
AA ++K + L+
Sbjct: 117 AAAMERDIIKALIPLSP 133
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 52.5 bits (125), Expect = 2e-07
Identities = 55/445 (12%), Positives = 117/445 (26%), Gaps = 120/445 (26%)
Query: 13 QVVNLRWKLVKKASQSCE-SKPPSFREHRILCIRRDFRSGFSGYSISSWCFSKNL---DR 68
+ L +++ + + S R H I R + S + L
Sbjct: 201 MLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRL--------LKSKPYENCLLVLL- 251
Query: 69 EKGSNSSNAVQGFRNLNSQVL------------SGSYDGYVIGGEEDAGSFPKEREAI-P 115
++ A F NL+ ++L S + ++ P E +++
Sbjct: 252 --NVQNAKAWNAF-NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL 308
Query: 116 KVL---IPGLPDEYNGESGAPIT-SCFWEWKPKFNVH---YEKAGCENVNSPPVLFLPGF 168
K L LP E + P S E ++ C+ + + L
Sbjct: 309 KYLDCRPQDLPRE--VLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSL--- 363
Query: 169 GVGSFHYEKQLK--DLGKDYRAWAIDFLGQGMSLPDEDPTPRS------KEGDSTEEKNF 220
L+ + K + ++ P P + ++
Sbjct: 364 --------NVLEPAEYRKMFDRLSV--------FPPSAHIPTILLSLIWFDVIKSDVMVV 407
Query: 221 LWGFGDK--AQPWASELAYSV-DLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACN 277
+ + E S+ ++ + +K + +
Sbjct: 408 VNKLHKYSLVEKQPKESTISIPSIYLE-----LKVKLENEYAL----------------- 445
Query: 278 PH--LVKGVTLLNATPFWGFSPNPIRS---PKLARILPWSGTFPLPASVRKL---IEFIW 329
H +V + P + + L R + F+
Sbjct: 446 -HRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLE 504
Query: 330 QKI-------SDPESIAEVLKQV--YADHATNVDTVFTRILETTQH--PAAAAS-----F 373
QKI + SI L+Q+ Y + + D + R++ P + +
Sbjct: 505 QKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKY 564
Query: 374 ASI----MFAPQGNLSFREALSRCQ 394
+ + A + F EA + Q
Sbjct: 565 TDLLRIALMAEDEAI-FEEAHKQVQ 588
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* Length = 270 | Back alignment and structure |
|---|
Score = 51.0 bits (122), Expect = 3e-07
Identities = 28/183 (15%), Positives = 45/183 (24%), Gaps = 43/183 (23%)
Query: 155 ENVNSPPVLFLPGF-----GVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRS 209
+ GF L+D + DF G G S
Sbjct: 42 FGEIYDMAIIFHGFTANRNTSLLREIANSLRDEN--IASVRFDFNGHGDS---------- 89
Query: 210 KEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFV 269
+G + + ++ Y + +Y+VG++ GG V
Sbjct: 90 -DGKFEN-----MTVLN----EIEDANAILN-------YVKTDPHVRNIYLVGHAQGGVV 132
Query: 270 AVYFAACNPHLVKGVTLLNATP------FWGFSPNPIRSPKLARILPWSGTFPLPASVRK 323
A A P L+K V LL G + +P L
Sbjct: 133 ASMLAGLYPDLIKKVVLLAPAATLKGDALEGNTQGVTYNPDHIPDRLPFKDLTLG---GF 189
Query: 324 LIE 326
+
Sbjct: 190 YLR 192
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} Length = 258 | Back alignment and structure |
|---|
Score = 49.6 bits (118), Expect = 6e-07
Identities = 42/293 (14%), Positives = 74/293 (25%), Gaps = 48/293 (16%)
Query: 158 NSPPVLFLPGFGVGSFHYEKQLKDLGKD-YRAWAIDFLGQGMSLPDEDPTPRSKEGDSTE 216
+ + G++ + K L +R A++ G+
Sbjct: 3 RKHHFVLVHNAYHGAWIWYKLKPLLESAGHRVTAVELAASGIDPRPIQAVE--------- 53
Query: 217 EKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAAC 276
+ ++P L + E V +VG S GG A
Sbjct: 54 ------TVDEYSKPLIETLKSLPEN--------------EEVILVGFSFGGINIALAADI 93
Query: 277 NPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPE 336
P +K + LNA F P+ P L E +S +
Sbjct: 94 FPAKIKVLVFLNA-----FLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHETRNGTMSLLK 148
Query: 337 SIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMN 396
+ +K + D ++L LS +E S
Sbjct: 149 MGPKFMKARLYQNCPIEDYELAKMLHRQGSFFTED------------LSKKEKFSEEGYG 196
Query: 397 GVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVP-EVCSL 448
V + ED + + + + YEI H P ++
Sbjct: 197 SVQRVYVMSSEDKAIPCDFIRWMIDNFNVSKVYEIDGGDHMVMLSKPQKLFDS 249
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A Length = 251 | Back alignment and structure |
|---|
Score = 48.7 bits (116), Expect = 1e-06
Identities = 38/279 (13%), Positives = 69/279 (24%), Gaps = 78/279 (27%)
Query: 162 VLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNF 220
V+ L + + L + Y + F G G P + T +
Sbjct: 25 VVLLHAYTGSPNDMNFMARALQRSGYGVYVPLFSGHGTVEPLDILTKGN----------- 73
Query: 221 LWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHL 280
W +E + +V + V+V G SLGG A+ P +
Sbjct: 74 -------PDIWWAESSAAVAHMTAKY---------AKVFVFGLSLGGIFAMKALETLPGI 117
Query: 281 VKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAE 340
G + ILP L K E++ + + +
Sbjct: 118 TAGGVFSSP------------------ILPGKH--HLVPGFLKYAEYMNRLAGKSDESTQ 157
Query: 341 VLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPI 400
+L P A+ + L+ + P
Sbjct: 158 ILA---------------------YLPGQLAAIDQFA------TTVAADLNLVK---QPT 187
Query: 401 CLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPH 439
+ +D V Q++ + A + H
Sbjct: 188 FIGQAGQDELVDGRLAYQLRDALINAARVDFHWYDDAKH 226
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} Length = 270 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 4e-06
Identities = 36/255 (14%), Positives = 68/255 (26%), Gaps = 79/255 (30%)
Query: 162 VLFLPGFGVGSFHYE---KQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEK 218
VL + GF + G Y G G D + T
Sbjct: 43 VLLVHGFTGTPHSMRPLAEAYAKAG--YTVCLPRLKGHGTHYEDMERT------------ 88
Query: 219 NFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNP 278
W + + + + + ++V G S+GG + +Y A +P
Sbjct: 89 --------TFHDWVASVEEGYGWLKQRC---------QTIFVTGLSMGGTLTLYLAEHHP 131
Query: 279 HLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESI 338
+ V + + + P +A + G P + ++ I + +P+
Sbjct: 132 DICGIVPI---------NA-AVDIPAIAAGMTGGGELP------RYLDSIGSDLKNPDVK 175
Query: 339 AEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGV 398
++ A+ A +M + L R
Sbjct: 176 ELAYEKTPT--------------------ASLLQLARLM------AQTKAKLDRIV---C 206
Query: 399 PICLIYGKEDPWVKP 413
P + ED V P
Sbjct: 207 PALIFVSDEDHVVPP 221
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E Length = 320 | Back alignment and structure |
|---|
Score = 46.6 bits (110), Expect = 8e-06
Identities = 30/173 (17%), Positives = 49/173 (28%), Gaps = 56/173 (32%)
Query: 161 PVLFLPGFG-----VGSFHY----EKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKE 211
P++ + G G Y ++ L+ G + +
Sbjct: 10 PIILVHGLTGTDKYAGVLEYWYGIQEDLQQRG--ATVYVAN------------------- 48
Query: 212 GDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR----EPVYVVGNSLGG 267
L GF P +Q+ ++K V+ V +VG+S GG
Sbjct: 49 ---------LSGFQSDDGPNGR---------GEQLLAYVKTVLAATGATKVNLVGHSQGG 90
Query: 268 FVAVYFAACNPHLVKGVTLLNA----TPFWGFSPNPIRSPKLARILPWSGTFP 316
+ Y AA P LV VT + + F F + F
Sbjct: 91 LTSRYVAAVAPDLVASVTTIGTPHRGSEFADFVQGVLAYDPTGLSSTVIAAFV 143
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} Length = 354 | Back alignment and structure |
|---|
Score = 46.1 bits (108), Expect = 1e-05
Identities = 33/184 (17%), Positives = 64/184 (34%), Gaps = 34/184 (18%)
Query: 158 NSPPVLFLPGFGVGSFHYE------KQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKE 211
+ ++ + GV + L G + + ID+ + +D
Sbjct: 62 SGEQLVTISWNGVHYTIPDYRKSIVLYLARNG--FNVYTIDYRTHYVPPFLKDRQLSFTA 119
Query: 212 GDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI-REPVYVVGNSLGGFVA 270
WG+ + D+ +V FIK +E +Y+ G S GG A
Sbjct: 120 N---------WGWST----------WISDI--KEVVSFIKRDSGQERIYLAGESFGGIAA 158
Query: 271 VYFAAC-NPHLVKGVTLLNATPFWGFSPNPIRSPKLARI--LPWSGTFPLPASVRKLIEF 327
+ +++ + +KG+ LL+ P +P++ I + G + +P S
Sbjct: 159 LNYSSLYWKNDIKGLILLDGGPTKHGIRPKFYTPEVNSIEEMEAKGIYVIP-SRGGPNNP 217
Query: 328 IWQK 331
IW
Sbjct: 218 IWSY 221
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 Length = 305 | Back alignment and structure |
|---|
Score = 45.8 bits (108), Expect = 2e-05
Identities = 41/305 (13%), Positives = 79/305 (25%), Gaps = 91/305 (29%)
Query: 138 FWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYE---KQLKDLGKDYRAWAIDFL 194
WE PK NV + +L GF H+ + L G + + D L
Sbjct: 22 VWETPPKENVP--------FKNNTILIASGFARRMDHFAGLAEYLSTNG--FHVFRYDSL 71
Query: 195 G-QGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV 253
G+S G E + L V ++++
Sbjct: 72 HHVGLS-----------SGSIDE-----FTMTTGKN----------SL--CTVYHWLQTK 103
Query: 254 IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSG 313
+ + ++ SL VA + +L+ ++ G
Sbjct: 104 GTQNIGLIAASLSARVAYEVIS--------------------------DLELSFLITAVG 137
Query: 314 TFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASF 373
L ++ K + F + + + + L + H + E
Sbjct: 138 VVNLRDTLEKALGFDYLSLP-IDELPNDLD--FEGHKLGSEVFVRDCFEHHWDTLD---- 190
Query: 374 ASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAP--YYEI 431
S + ++ VP+ D WVK + + Y +
Sbjct: 191 -----------STLDKVANTS---VPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSL 236
Query: 432 SPAGH 436
+ H
Sbjct: 237 LGSSH 241
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 Length = 238 | Back alignment and structure |
|---|
Score = 45.1 bits (106), Expect = 2e-05
Identities = 26/200 (13%), Positives = 48/200 (24%), Gaps = 29/200 (14%)
Query: 160 PPVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEK 218
+L L G H L + + A D G + + +
Sbjct: 25 ALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHG----------EREGPPPSSKS 74
Query: 219 NFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNP 278
+ E +V + P+++ G SLG FVA A
Sbjct: 75 PRYVEEVYRVALGFKE-------EARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGF 127
Query: 279 HLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPL--PASVRKLIEFIWQKISDP- 335
+ + + + + +L P + + D
Sbjct: 128 RPRGVLAFIGSGFPMKLPQG--QVVEDPGVLALYQAPPATRGEAYGGVPLLHLHGSRDHI 185
Query: 336 ------ESIAEVLKQVYADH 349
E E L+ Y +
Sbjct: 186 VPLARMEKTLEALRPHYPEG 205
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* Length = 317 | Back alignment and structure |
|---|
Score = 45.5 bits (107), Expect = 2e-05
Identities = 54/310 (17%), Positives = 99/310 (31%), Gaps = 52/310 (16%)
Query: 147 VHYEKAGCENVNSPPVLFL---PGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDE 203
+++E +G N N P +F+ PG G+ H + + Y+ D G G S P
Sbjct: 27 IYWELSG--NPNGKPAVFIHGGPGGGISPHHRQLFDPE---RYKVLLFDQRGCGRSRPHA 81
Query: 204 DPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGN 263
+ N W + V+ W V G
Sbjct: 82 SL-----------DNNTTWHLVADIERLREMA--GVEQWL----------------VFGG 112
Query: 264 SLGGFVAVYFAACNPHLVKGVTLLNATP--------FWGFSPNPIRSPKLARILPWSGTF 315
S G +A+ +A +P V + L ++ + K R+L
Sbjct: 113 SWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERVLSILSDD 172
Query: 316 PLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFAS 375
+ + + DP+ E K V + +R + A +FA
Sbjct: 173 ERKDVIAAYRQRLTSA--DPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFAR 230
Query: 376 IMFAPQGNLSFREALSR-----CQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYE 430
I +L F E+ + + +P +++G+ D + + + PEA +
Sbjct: 231 IENHYFTHLGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWPEAELHI 290
Query: 431 ISPAGHCPHD 440
+ AGH +
Sbjct: 291 VEGAGHSYDE 300
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} Length = 398 | Back alignment and structure |
|---|
Score = 45.1 bits (106), Expect = 3e-05
Identities = 38/199 (19%), Positives = 64/199 (32%), Gaps = 31/199 (15%)
Query: 160 PPVLFLPGFG------VGSFHYEKQLKDLGKD-------------YRAWAIDFLGQGMSL 200
P +L +PG G G +L D KD Y A A+D G +
Sbjct: 120 PAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKEGYIAVAVDNPAAGEAS 179
Query: 201 PDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYV 260
E T S + L + ++ + Q K + ++ + V
Sbjct: 180 DLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQ-----KHIRKDRIVV 234
Query: 261 VGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPAS 320
G SLG + + + V F ++ + +G P P S
Sbjct: 235 SGFSLGTEPMMVLGTLDTSIYAFVY-------NDFLCQTQERAEVMTMPDKNGRRPFPNS 287
Query: 321 VRKLIEFIWQKISDPESIA 339
+R LI W+ + P+ +A
Sbjct: 288 IRHLIPDFWKNFNFPDIVA 306
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} Length = 250 | Back alignment and structure |
|---|
Score = 44.0 bits (103), Expect = 4e-05
Identities = 26/164 (15%), Positives = 57/164 (34%), Gaps = 14/164 (8%)
Query: 161 PVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNF 220
PV+ +PG ++ + +LGK+ + + D + E
Sbjct: 6 PVIMVPGSSASQNRFDSLITELGKET--PKKHSVLKLTVQTDGTIKYSGSIAANDNEPFI 63
Query: 221 LWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR-EPVYVVGNSLGGFVAVYFAACN-- 277
+ GF + A+ +V W + + + Y +G+S GG + F
Sbjct: 64 VIGFANNRDGKANIDKQAV--WLNTAFKALVKTYHFNHFYALGHSNGGLIWTLFLERYLK 121
Query: 278 ----PHLVKGVTLLNATPFWGFSPNP-IRSPKLARILPWSGTFP 316
H+ + +T+ A+P+ S + ++ + + P
Sbjct: 122 ESPKVHIDRLMTI--ASPYNMESTSTTAKTSMFKELYRYRTGLP 163
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} Length = 254 | Back alignment and structure |
|---|
Score = 43.3 bits (101), Expect = 7e-05
Identities = 30/162 (18%), Positives = 57/162 (35%), Gaps = 20/162 (12%)
Query: 158 NSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTE- 216
+ P++ + G G + +K L +YR + + L ++ + D+
Sbjct: 2 DQIPIILIHGSGGNASSLDKMADQLMNEYR-SSNEALTMTVNSEGKIKFEGKLTKDAKRP 60
Query: 217 --EKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFA 274
+ F W+ L +++ + + Y ++ VG+S GG Y+A
Sbjct: 61 IIKFGFEQNQATPDD-WSKWLKIAMEDLKSR--YGFTQMD-----GVGHSNGGLALTYYA 112
Query: 275 ACN------PHLVKGVTLLNATPFWGFSPNPIRSPKLARILP 310
P L K V + +PF PN + LP
Sbjct: 113 EDYAGDKTVPTLRKLVAI--GSPFNDLDPNDNGMDLSFKKLP 152
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 Length = 313 | Back alignment and structure |
|---|
Score = 43.3 bits (101), Expect = 1e-04
Identities = 54/310 (17%), Positives = 88/310 (28%), Gaps = 51/310 (16%)
Query: 147 VHYEKAGCENVNSPPVLFL---PGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDE 203
+++E+ G N + PV+ L PG G YR D G G S P
Sbjct: 24 LYFEQCG--NPHGKPVVMLHGGPGGGCNDKMRRFHDPAK---YRIVLFDQRGSGRSTPHA 78
Query: 204 DPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGN 263
D N W + + L VD W V G
Sbjct: 79 DL-----------VDNTTWDLVADIERLRTHL--GVDRW----------------QVFGG 109
Query: 264 SLGGFVAVYFAACNPHLVKGVTLLNATP--------FWGFSPNPIRSPKLARILPWSGTF 315
S G +A+ +A +P V + L F+ + + L
Sbjct: 110 SWGSTLALAYAQTHPQQVTELVLRGIFLLRRFELEWFYQEGASRLFPDAWEHYLNAIPPV 169
Query: 316 PLPASVRKLIEFIWQKISDPESIAEVL--KQVYADHATNVDTVFTRILETTQHPAAAASF 373
+ + A A +VD F E A A
Sbjct: 170 ERADLMSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARI 229
Query: 374 ASIMFAPQGNLSFREAL--SRCQMNGVPICLIYGKEDPWVKPVWGLQ-VKRQVPEAPYYE 430
+ F G + L ++ +P +++G+ D V P+ + + P+A
Sbjct: 230 ENHYFVNGGFFEVEDQLLRDAHRIADIPGVIVHGRYD-VVCPLQSAWDLHKAWPKAQLQI 288
Query: 431 ISPAGHCPHD 440
+GH +
Sbjct: 289 SPASGHSAFE 298
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* Length = 484 | Back alignment and structure |
|---|
Score = 43.0 bits (100), Expect = 2e-04
Identities = 29/177 (16%), Positives = 55/177 (31%), Gaps = 11/177 (6%)
Query: 159 SPPVLFLPGFGVGSFHYEKQ---LKDLG-KDYRAWAIDFLG-QGMSLPDEDPTPRSKEGD 213
PV+F+ G + +E Q G ++ + + D +
Sbjct: 22 FRPVVFVHGLAGSAGQFESQGMRFAANGYPAEYVKTFEYDTISWALVVETDMLFSGLGSE 81
Query: 214 STEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR----EPVYVVGNSLGGFV 269
+ + + + +D ++ I E + + V +VG+S+G F
Sbjct: 82 FGLNISQIIDPETLDKILSKSRERLIDETFSRLDRVIDEALAESGADKVDLVGHSMGTFF 141
Query: 270 AVYFAACNPHLVKGV-TLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLI 325
V + +P V L+ WG P P LA L K++
Sbjct: 142 LVRYVNSSPERAAKVAHLILLDGVWGVDA-PEGIPTLAVFGNPKALPALGLPEEKVV 197
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* Length = 316 | Back alignment and structure |
|---|
Score = 41.7 bits (97), Expect = 3e-04
Identities = 26/194 (13%), Positives = 42/194 (21%), Gaps = 46/194 (23%)
Query: 108 PKEREAIPKVLIPGLPDEYNGESGAPITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPG 167
P R S + + + S P+L +PG
Sbjct: 17 PYARPFAVGKRTCSGIVGLPSGSDPAFSQ---PKSVLDAGLTCQGASPSSVSKPILLVPG 73
Query: 168 FGVGS-----FHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLW 222
G ++ LG Y I +
Sbjct: 74 TGTTGPQSFDSNWIPLSAQLG--YTPCWISPPP--------------------------F 105
Query: 223 GFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVK 282
D Q + ++ + V+ S GG VA + P +
Sbjct: 106 MLND-TQVNTEYMVNAIT-------TLYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRS 157
Query: 283 GVTLL--NATPFWG 294
V L A + G
Sbjct: 158 KVDRLMAFAPDYKG 171
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} Length = 391 | Back alignment and structure |
|---|
Score = 41.4 bits (96), Expect = 4e-04
Identities = 24/174 (13%), Positives = 47/174 (27%), Gaps = 14/174 (8%)
Query: 166 PGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFG 225
+ + G Y A A+D G + E + L
Sbjct: 142 EDYNNPKVSMALNMVKEG--YVAVAVDNAAAGEASDLECYDKGWNYDYDVVSRFLLELGW 199
Query: 226 DKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVT 285
+ ++ + Q + ++ + + G SLG + + + V
Sbjct: 200 SWLGYTSYLDMQVLNWMKAQ-----SYIRKDRIVISGFSLGTEPMMVLGVLDKDIYAFVY 254
Query: 286 LLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIA 339
F + P P S+R LI W+ + P+ +A
Sbjct: 255 -------NDFLCQTQERAVVMTKPDKENRRPFPNSIRHLIPGYWRYFNFPDVVA 301
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A Length = 181 | Back alignment and structure |
|---|
Score = 40.1 bits (94), Expect = 5e-04
Identities = 19/142 (13%), Positives = 39/142 (27%), Gaps = 44/142 (30%)
Query: 160 PPVLFLPGFGVGSFHYEKQLKDLGKD-YRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEK 218
PV+ + G G SF++ L + +
Sbjct: 4 NPVVMVHGIGGASFNFAGIKSYLVSQGWSRDKL--------------------------- 36
Query: 219 NFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR----EPVYVVGNSLGGFVAVYFA 274
+ F + + F+++V+ + V +V +S+GG +Y+
Sbjct: 37 -YAVDFW----DKTGTNYNNGP----VLSRFVQKVLDETGAKKVDIVAHSMGGANTLYYI 87
Query: 275 ACN--PHLVKGVTLLNATPFWG 294
+ V V L
Sbjct: 88 KNLDGGNKVANVVTL-GGANRL 108
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* Length = 303 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 8e-04
Identities = 18/81 (22%), Positives = 38/81 (46%), Gaps = 10/81 (12%)
Query: 249 FIKEVIRE----PVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWG--FSPNPIR- 301
+ + ++ PV+++G+S+GG +A+ AA P G+ +L + S +
Sbjct: 103 HVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGM-VLISPLVLANPESATTFKV 161
Query: 302 --SPKLARILPWSGTFPLPAS 320
+ L +LP + P+ +S
Sbjct: 162 LAAKVLNSVLPNLSSGPIDSS 182
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 451 | |||
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 100.0 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 100.0 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 100.0 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 100.0 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 100.0 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 100.0 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 100.0 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 100.0 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 100.0 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 100.0 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 100.0 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 100.0 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 100.0 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 100.0 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 100.0 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 100.0 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 100.0 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 100.0 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 100.0 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 100.0 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 100.0 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 100.0 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 100.0 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 100.0 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 100.0 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 100.0 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 100.0 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 100.0 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 100.0 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 100.0 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 99.98 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 99.98 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 99.98 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 99.97 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 99.97 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 99.97 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 99.97 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 99.97 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 99.97 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 99.97 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 99.97 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 99.97 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 99.97 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 99.97 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 99.97 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 99.97 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 99.97 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 99.97 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 99.97 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 99.97 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 99.97 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 99.97 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 99.97 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 99.97 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 99.97 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 99.97 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 99.97 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 99.97 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 99.97 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 99.97 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 99.96 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 99.96 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 99.96 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 99.96 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 99.96 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 99.96 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 99.96 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 99.96 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 99.96 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.96 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 99.93 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 99.96 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 99.96 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 99.96 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 99.96 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 99.96 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 99.96 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 99.96 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 99.95 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 99.95 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 99.95 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 99.95 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 99.95 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 99.95 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 99.95 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 99.94 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 99.94 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.94 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 99.94 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 99.94 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 99.92 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.92 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 99.91 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.91 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.91 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 99.91 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 99.91 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.91 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.91 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.9 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.9 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.9 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.89 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.89 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.89 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.89 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.89 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.89 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.89 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.88 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.88 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.88 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.88 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.88 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.88 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.88 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.87 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.87 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.87 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.87 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.86 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.86 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.85 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.85 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.85 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.85 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.85 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.84 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.84 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.83 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.83 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.83 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.83 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.83 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.82 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.82 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.82 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.82 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.82 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.82 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.81 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.8 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.8 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.8 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.79 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.79 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.79 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.78 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.78 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.78 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 99.78 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 99.77 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.77 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.77 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.76 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.76 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.76 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.76 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.75 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.75 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.75 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.75 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 99.75 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.74 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.74 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.74 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 99.74 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.74 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.73 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.72 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.72 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 99.72 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.71 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 99.71 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.71 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.7 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.7 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.69 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.69 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 99.69 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.68 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.68 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.68 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.66 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 99.66 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 99.66 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 99.65 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 99.65 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.65 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 99.65 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.64 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.63 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.63 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 99.62 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.61 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 99.61 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 99.6 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 99.6 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 99.6 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 99.59 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 99.58 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 99.58 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 99.57 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.57 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 99.56 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 99.54 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 99.52 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 99.51 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 99.47 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 99.46 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 99.44 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 99.44 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 99.44 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 99.43 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 99.42 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 99.34 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 99.3 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 99.3 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 99.3 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 99.2 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 99.19 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 99.14 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 99.13 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 99.07 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 98.93 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 98.68 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 98.44 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 98.38 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 98.38 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 98.36 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 98.34 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 98.28 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 98.23 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 98.18 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 98.18 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 98.09 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 97.86 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 97.8 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 97.79 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 97.76 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 97.69 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 97.66 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 97.66 | |
| 4az3_A | 300 | Lysosomal protective protein 32 kDa chain; hydrola | 97.65 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 97.54 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 97.34 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 97.19 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 97.17 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 97.11 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 97.1 | |
| 1gxs_A | 270 | P-(S)-hydroxymandelonitrIle lyase chain A; inhibit | 97.1 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 97.08 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 96.97 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 96.63 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 96.28 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 96.04 | |
| 1lgy_A | 269 | Lipase, triacylglycerol lipase; hydrolase (carboxy | 95.61 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 95.39 | |
| 3hc7_A | 254 | Gene 12 protein, GP12; alpha/beta sandwich, cell a | 95.32 | |
| 1uwc_A | 261 | Feruloyl esterase A; hydrolase, serine esterase, x | 94.95 | |
| 3uue_A | 279 | LIP1, secretory lipase (family 3); LID-domain, hyd | 94.89 | |
| 3g7n_A | 258 | Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A | 94.7 | |
| 3o0d_A | 301 | YALI0A20350P, triacylglycerol lipase; alpha/beta-h | 94.22 | |
| 3ngm_A | 319 | Extracellular lipase; secret lipase, hydrolase; 2. | 94.06 | |
| 3qpa_A | 197 | Cutinase; alpha-beta hydrolase fold, esterase, hyd | 93.36 | |
| 4az3_B | 155 | Lysosomal protective protein 20 kDa chain; hydrola | 92.64 | |
| 3dcn_A | 201 | Cutinase, cutin hydrolase; catalytic triad, secret | 91.54 | |
| 1g66_A | 207 | Acetyl xylan esterase II; serine hydrolase, acetyl | 90.55 | |
| 1qoz_A | 207 | AXE, acetyl xylan esterase; hydrolase, xylan degra | 89.72 | |
| 1gxs_B | 158 | P-(S)-hydroxymandelonitrIle lyase chain B; inhibit | 89.62 | |
| 3qpd_A | 187 | Cutinase 1; alpha-beta hydrolase fold, esterase, h | 89.53 | |
| 2czq_A | 205 | Cutinase-like protein; alpha/beta hydrolase fold, | 87.95 | |
| 3aja_A | 302 | Putative uncharacterized protein; alpha-beta hydro | 86.52 | |
| 2ory_A | 346 | Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Ph | 85.93 | |
| 2yij_A | 419 | Phospholipase A1-iigamma; hydrolase; 2.00A {Arabid | 85.75 |
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-36 Score=282.37 Aligned_cols=251 Identities=20% Similarity=0.274 Sum_probs=177.1
Q ss_pred cceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCch
Q 013006 136 SCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDST 215 (451)
Q Consensus 136 ~~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~ 215 (451)
..++...||.+|+|...|++ ++|+|||+||++.+...|..+++.|+++|+|+++|+||||.|+.+...
T Consensus 6 ~~~~~~~~g~~l~y~~~G~~--~~p~lvl~hG~~~~~~~w~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~---------- 73 (266)
T 3om8_A 6 LSFLATSDGASLAYRLDGAA--EKPLLALSNSIGTTLHMWDAQLPALTRHFRVLRYDARGHGASSVPPGP---------- 73 (266)
T ss_dssp CEEEECTTSCEEEEEEESCT--TSCEEEEECCTTCCGGGGGGGHHHHHTTCEEEEECCTTSTTSCCCCSC----------
T ss_pred ceEEeccCCcEEEEEecCCC--CCCEEEEeCCCccCHHHHHHHHHHhhcCcEEEEEcCCCCCCCCCCCCC----------
Confidence 45677889999999999963 478999999999999999999999999999999999999999765432
Q ss_pred hhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCC
Q 013006 216 EEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGF 295 (451)
Q Consensus 216 ~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~ 295 (451)
|+++++++|+.++++++++++++||||||||.+++.+|.++|++|+++|++++.+....
T Consensus 74 ---------------------~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~ 132 (266)
T 3om8_A 74 ---------------------YTLARLGEDVLELLDALEVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGP 132 (266)
T ss_dssp ---------------------CCHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCC
T ss_pred ---------------------CCHHHHHHHHHHHHHHhCCCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCc
Confidence 79999999999999999999999999999999999999999999999999998653111
Q ss_pred CCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhc----CCCChHHHHHHHHhhccChhHHH
Q 013006 296 SPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYAD----HATNVDTVFTRILETTQHPAAAA 371 (451)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 371 (451)
..... ..+.. ..............+..++.. ......+.+..............
T Consensus 133 -----~~~~~----------------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (266)
T 3om8_A 133 -----AAQWD----------------ERIAA-VLQAEDMSETAAGFLGNWFPPALLERAEPVVERFRAMLMATNRHGLAG 190 (266)
T ss_dssp -----SHHHH----------------HHHHH-HHHCSSSHHHHHHHHHHHSCHHHHHSCCHHHHHHHHHHHTSCHHHHHH
T ss_pred -----hhHHH----------------HHHHH-HHccccHHHHHHHHHHHhcChhhhhcChHHHHHHHHHHHhCCHHHHHH
Confidence 00000 00000 000000001111111111110 00000011111111111111111
Q ss_pred HHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 372 SFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
.+... . . .+....+.++++|+|+|+|++|.++|++.++.+++.+|++++++++ +||++++|+|++|++.|
T Consensus 191 ~~~~~-~----~---~d~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~l~~~ip~a~~~~i~-~gH~~~~e~p~~~~~~i 260 (266)
T 3om8_A 191 SFAAV-R----D---TDLRAQLARIERPTLVIAGAYDTVTAASHGELIAASIAGARLVTLP-AVHLSNVEFPQAFEGAV 260 (266)
T ss_dssp HHHHH-H----T---CBCTTTGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSTTCEEEEES-CCSCHHHHCHHHHHHHH
T ss_pred HHHHh-h----c---cchhhHhcCCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEeC-CCCCccccCHHHHHHHH
Confidence 11111 1 0 1223456789999999999999999999999999999999999997 79999999999999876
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-34 Score=270.98 Aligned_cols=249 Identities=22% Similarity=0.283 Sum_probs=170.8
Q ss_pred ecCCeEEEEeecCCCCCCCCcEEEecCCCCCh---hcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhh
Q 013006 141 WKPKFNVHYEKAGCENVNSPPVLFLPGFGVGS---FHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEE 217 (451)
Q Consensus 141 ~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~---~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~ 217 (451)
..+|.+++|...| ++++|||+||++.+. ..|..+++.|+++|+|+++|+||||.|+.+...
T Consensus 11 ~~~g~~l~y~~~G----~g~~vvllHG~~~~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~------------ 74 (282)
T 1iup_A 11 LAAGVLTNYHDVG----EGQPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPENY------------ 74 (282)
T ss_dssp EETTEEEEEEEEC----CSSEEEEECCCCTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCTTC------------
T ss_pred EECCEEEEEEecC----CCCeEEEECCCCCCccHHHHHHHHHHhhccCCEEEEECCCCCCCCCCCCCC------------
Confidence 3579999999998 368999999997554 378888899988999999999999999754321
Q ss_pred hhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCC
Q 013006 218 KNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSP 297 (451)
Q Consensus 218 ~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~ 297 (451)
.|+++++++|+.++++++++++++||||||||.+|+.+|.++|++|+++|++++.+... .
T Consensus 75 ------------------~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~--~ 134 (282)
T 1iup_A 75 ------------------NYSKDSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRF--D 134 (282)
T ss_dssp ------------------CCCHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCC--C
T ss_pred ------------------CCCHHHHHHHHHHHHHHhCCCceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCC--C
Confidence 17999999999999999999999999999999999999999999999999999864210 0
Q ss_pred CCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHH
Q 013006 298 NPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIM 377 (451)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (451)
..........+ .+....... .+...........+......+.....+.....+....
T Consensus 135 ---~~~~~~~~~~~---~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (282)
T 1iup_A 135 ---VTEGLNAVWGY---TPSIENMRN-----------------LLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMF 191 (282)
T ss_dssp ---CCHHHHHHHTC---CSCHHHHHH-----------------HHHHHCSSGGGCCHHHHHHHHHHHTSTTHHHHHHHHS
T ss_pred ---CCHHHHHHhcC---CCcHHHHHH-----------------HHHHhhcCcccCCHHHHHHHHhhccChHHHHHHHHHH
Confidence 11122221111 011111111 1111111100001111111111111222211111111
Q ss_pred hcCCCCCchhH----HhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 378 FAPQGNLSFRE----ALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 378 ~~~~~~~~~~~----~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
... ...+.+ ....+.++++|+|+|+|++|.++|++.++++++.+|++++++++++||++++|+|++|++.|
T Consensus 192 ~~~--~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i 266 (282)
T 1iup_A 192 PEP--RQRWIDALASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELIDRAQLHVFGRCGHWTQIEQTDRFNRLV 266 (282)
T ss_dssp CSS--THHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCTTEEEEEESSCCSCHHHHSHHHHHHHH
T ss_pred hcc--ccccccccccchhhhhhcCCCEEEEecCCCCCCCHHHHHHHHHhCCCCeEEEECCCCCCccccCHHHHHHHH
Confidence 000 000001 01456789999999999999999999999999999999999999999999999999999876
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-34 Score=270.27 Aligned_cols=252 Identities=19% Similarity=0.207 Sum_probs=173.4
Q ss_pred eEEEEeecCCCCCCCCcEEEecCCC---CChhcHHHHH-HhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhc
Q 013006 145 FNVHYEKAGCENVNSPPVLFLPGFG---VGSFHYEKQL-KDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNF 220 (451)
Q Consensus 145 ~~l~y~~~g~~~~~~p~VlllHG~~---~~~~~~~~~~-~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~ 220 (451)
.+++|...|+ +++|||+||++ .+...|..++ +.|+++|+|+++|+||||.|+.+...
T Consensus 23 ~~l~y~~~G~----g~~vvllHG~~~~~~~~~~w~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~--------------- 83 (286)
T 2puj_A 23 FNIHYNEAGN----GETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMD--------------- 83 (286)
T ss_dssp EEEEEEEECC----SSEEEEECCCSTTCCHHHHHTTTHHHHHHTTCEEEEECCTTSTTSCCCCCS---------------
T ss_pred EEEEEEecCC----CCcEEEECCCCCCCCcHHHHHHHHHHHHhccCEEEEECCCCCCCCCCCCCc---------------
Confidence 9999999983 68999999998 7788999999 99988899999999999999765321
Q ss_pred cccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCC
Q 013006 221 LWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPI 300 (451)
Q Consensus 221 ~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~ 300 (451)
.|+++++++|+.++++++++++++||||||||.+|+.+|.++|++|+++|++++.+.........
T Consensus 84 ---------------~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~ 148 (286)
T 2puj_A 84 ---------------EQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPM 148 (286)
T ss_dssp ---------------SCHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCS
T ss_pred ---------------CcCHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCCccccc
Confidence 17999999999999999999999999999999999999999999999999999864210000000
Q ss_pred CchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHh-hccChhHHHHHHHHHhc
Q 013006 301 RSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILE-TTQHPAAAASFASIMFA 379 (451)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 379 (451)
.. .....+...+. ......+...+...........+........ ....+.....+...+..
T Consensus 149 ~~----------------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (286)
T 2puj_A 149 PM----------------EGIKLLFKLYA--EPSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQK 210 (286)
T ss_dssp SC----------------HHHHHHHHHHH--SCCHHHHHHHHHHHCSCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred ch----------------hhHHHHHHHhh--CCcHHHHHHHHHHHhcCCccCCHHHHHHHHHHhhcCHHHHHHHHHHHhh
Confidence 00 11111111110 0111122222222221111111122221111 11122222222221111
Q ss_pred CCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 380 PQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 380 ~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
... ...+....+.++++|+|+|+|++|.++|++.++++++.+|++++++++++||++++|+|+++++.|
T Consensus 211 ~~~--~~~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i 279 (286)
T 2puj_A 211 APL--STWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGAWAQWEHADEFNRLV 279 (286)
T ss_dssp SCG--GGGCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHSSSEEEEEESSCCSCHHHHTHHHHHHHH
T ss_pred hhc--cccchhhHHhhcCCCEEEEEECCCCccCHHHHHHHHHHCCCCeEEEeCCCCCCccccCHHHHHHHH
Confidence 000 111233456789999999999999999999999999999999999999999999999999999876
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-34 Score=271.90 Aligned_cols=269 Identities=18% Similarity=0.193 Sum_probs=173.5
Q ss_pred ecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhc
Q 013006 141 WKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNF 220 (451)
Q Consensus 141 ~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~ 220 (451)
..+|.+++|...| ++|+|||+||++++...|..+++.|+++|+||++|+||||.|+.+ ....
T Consensus 15 ~~~g~~l~y~~~G----~g~~lvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~-~~~~------------- 76 (294)
T 1ehy_A 15 QLPDVKIHYVREG----AGPTLLLLHGWPGFWWEWSKVIGPLAEHYDVIVPDLRGFGDSEKP-DLND------------- 76 (294)
T ss_dssp ECSSCEEEEEEEE----CSSEEEEECCSSCCGGGGHHHHHHHHTTSEEEEECCTTSTTSCCC-CTTC-------------
T ss_pred EECCEEEEEEEcC----CCCEEEEECCCCcchhhHHHHHHHHhhcCEEEecCCCCCCCCCCC-cccc-------------
Confidence 4579999999998 468999999999999999999999988899999999999999864 2100
Q ss_pred cccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCC
Q 013006 221 LWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPI 300 (451)
Q Consensus 221 ~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~ 300 (451)
...|+++++++|+.++++++++++++||||||||.+++.+|.++|++|+++|++++... +..+...
T Consensus 77 -------------~~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~-~~~~~~~ 142 (294)
T 1ehy_A 77 -------------LSKYSLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQP-DFGPVYF 142 (294)
T ss_dssp -------------GGGGCHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCT-TC-----
T ss_pred -------------ccCcCHHHHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHHhChhheeEEEEecCCCC-Ccchhhc
Confidence 00189999999999999999999999999999999999999999999999999997421 1111000
Q ss_pred CchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChH----HHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHH
Q 013006 301 RSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPE----SIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASI 376 (451)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (451)
... .....|...+..+. +...+.. .... ....++...........+.....+......+.........
T Consensus 143 ~~~--~~~~~~~~~~~~~~----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (294)
T 1ehy_A 143 GLG--HVHESWYSQFHQLD----MAVEVVG--SSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNY 214 (294)
T ss_dssp --------CCHHHHHTTCH----HHHHHHT--SCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHH
T ss_pred cch--hccCceEEEecCcc----hhHHHhc--cchhHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHhcCCcccchHHHH
Confidence 000 00000000000000 0000000 1110 1111112211111112223333333333333222111111
Q ss_pred Hhc-CCCCCchhHHhhhccCCCCCEEEEeeCCCCCCC-hHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 377 MFA-PQGNLSFREALSRCQMNGVPICLIYGKEDPWVK-PVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 377 ~~~-~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~-~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
... ...... ......+.++++|||+|+|++|.++| ....+.+++.+|++++++++++||++++|+|+++++.|
T Consensus 215 ~~~~~~~~~~-~~~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i 289 (294)
T 1ehy_A 215 YRANIRPDAA-LWTDLDHTMSDLPVTMIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEKPEIAIDRI 289 (294)
T ss_dssp HHHHSSSSCC-CCCTGGGSCBCSCEEEEEECCSSCCTTHHHHHHHHHHBSSEEEEEETTCCSCHHHHCHHHHHHHH
T ss_pred HHHHHhhhhh-hcCCcccCcCCCCEEEEEeCCCCCcchHHHHHHHHHHcCCCceEEeCCCCCChhhhCHHHHHHHH
Confidence 110 110100 00012455799999999999999998 46788889999999999999999999999999999876
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-34 Score=270.03 Aligned_cols=246 Identities=16% Similarity=0.166 Sum_probs=167.3
Q ss_pred EEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCC
Q 013006 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFG 225 (451)
Q Consensus 146 ~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~ 225 (451)
.|+|+..|+..+++|+|||+||++++...|..++..|+++|+|+++|+||||.|..+...
T Consensus 2 ~i~y~~~g~~~~~~~~vvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~-------------------- 61 (268)
T 3v48_A 2 HMKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAE-------------------- 61 (268)
T ss_dssp CSCCEECCCSSTTCCEEEEECCTTCCGGGGHHHHHHHHTTSEEEECCCTTBTTBCCCCCT--------------------
T ss_pred ceEEEecCCCCCCCCEEEEeCCCCccHHHHHHHHHHHhhcCeEEEECCCCCCCCCCCccc--------------------
Confidence 367888887656789999999999999999999999999999999999999999654221
Q ss_pred CCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHH
Q 013006 226 DKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKL 305 (451)
Q Consensus 226 ~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~ 305 (451)
.|+++++++|+.++++++++++++||||||||.+++.+|.++|++|+++|++++.+.. ....
T Consensus 62 ----------~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~--------~~~~ 123 (268)
T 3v48_A 62 ----------DYSIAQMAAELHQALVAAGIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRI--------NAHT 123 (268)
T ss_dssp ----------TCCHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBC--------CHHH
T ss_pred ----------cCCHHHHHHHHHHHHHHcCCCCeEEEEecHHHHHHHHHHHhChhhceEEEEecccccc--------chhh
Confidence 1799999999999999999999999999999999999999999999999999975310 0000
Q ss_pred hhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHH-----HHHhhcCCCChHHHHHHHHhhccCh-hHHHHHHHHHhc
Q 013006 306 ARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVL-----KQVYADHATNVDTVFTRILETTQHP-AAAASFASIMFA 379 (451)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 379 (451)
... .......... ........... ..+...................... .....+.....
T Consensus 124 ~~~------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 189 (268)
T 3v48_A 124 RRC------------FQVRERLLYS-GGAQAWVEAQPLFLYPADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKR- 189 (268)
T ss_dssp HHH------------HHHHHHHHHH-HHHHHHHHHHHHHHSCHHHHHTTHHHHHHHHHHHHHTCCCHHHHHHHHHHHHH-
T ss_pred hHH------------HHHHHHHHhc-cchhhhhhhhhhhcCchhhhhcccccchhhHHHHHhhcCchhHHHHHHHHHhc-
Confidence 000 0000000000 00000000000 0000000000000000000001000 00111111110
Q ss_pred CCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 380 PQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 380 ~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
.+....+.++++|||+|+|++|.++|++.++++++.+|++++++++++||++++|+|++|++.|
T Consensus 190 -------~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~l~~~~p~~~~~~~~~~GH~~~~e~p~~~~~~i 253 (268)
T 3v48_A 190 -------ADFSHHADRIRCPVQIICASDDLLVPTACSSELHAALPDSQKMVMPYGGHACNVTDPETFNALL 253 (268)
T ss_dssp -------CBCTTTGGGCCSCEEEEEETTCSSSCTHHHHHHHHHCSSEEEEEESSCCTTHHHHCHHHHHHHH
T ss_pred -------cchhhhhhcCCCCeEEEEeCCCcccCHHHHHHHHHhCCcCeEEEeCCCCcchhhcCHHHHHHHH
Confidence 1123456789999999999999999999999999999999999999999999999999999876
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-34 Score=269.13 Aligned_cols=247 Identities=20% Similarity=0.238 Sum_probs=170.5
Q ss_pred cCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhcc
Q 013006 142 KPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFL 221 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~ 221 (451)
.+|.+++|...|+.++.+|+|||+||++.+...|..+++.|+++|+|+++|+||||.|..+...
T Consensus 9 ~~g~~l~y~~~g~~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~---------------- 72 (266)
T 2xua_A 9 VNGTELHYRIDGERHGNAPWIVLSNSLGTDLSMWAPQVAALSKHFRVLRYDTRGHGHSEAPKGP---------------- 72 (266)
T ss_dssp CSSSEEEEEEESCSSSCCCEEEEECCTTCCGGGGGGGHHHHHTTSEEEEECCTTSTTSCCCSSC----------------
T ss_pred ECCEEEEEEEcCCccCCCCeEEEecCccCCHHHHHHHHHHHhcCeEEEEecCCCCCCCCCCCCC----------------
Confidence 4799999999996432378999999999999999999999988899999999999999754321
Q ss_pred ccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCC
Q 013006 222 WGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIR 301 (451)
Q Consensus 222 w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~ 301 (451)
++++++++|+.++++++++++++||||||||.+|+.+|.++|++|+++|++++.+... .
T Consensus 73 ---------------~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~---~--- 131 (266)
T 2xua_A 73 ---------------YTIEQLTGDVLGLMDTLKIARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIG---S--- 131 (266)
T ss_dssp ---------------CCHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCS---C---
T ss_pred ---------------CCHHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCC---c---
Confidence 7999999999999999999999999999999999999999999999999999864211 0
Q ss_pred chHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCC-ChHHHHHHHHhhcc--ChhHHHHHHHHHh
Q 013006 302 SPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHAT-NVDTVFTRILETTQ--HPAAAASFASIMF 378 (451)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 378 (451)
....... ...... ..........+..++..... ..+.....+..... ...........+.
T Consensus 132 ~~~~~~~------------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (266)
T 2xua_A 132 PEVWVPR------------AVKART-----EGMHALADAVLPRWFTADYMEREPVVLAMIRDVFVHTDKEGYASNCEAID 194 (266)
T ss_dssp HHHHHHH------------HHHHHH-----HCHHHHHHHHHHHHSCHHHHHHCHHHHHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred hHHHHHH------------HHHHHh-----cChHHHHHHHHHHHcCcccccCCHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 0000000 000000 00000000111111100000 00011111111110 1111111111111
Q ss_pred cCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 379 APQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 379 ~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
. .+....+.++++|+|+|+|++|.++|++..+++++.+|++++++++ +||++++|+|+++++.|
T Consensus 195 ~-------~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i 258 (266)
T 2xua_A 195 A-------ADLRPEAPGIKVPALVISGTHDLAATPAQGRELAQAIAGARYVELD-ASHISNIERADAFTKTV 258 (266)
T ss_dssp H-------CCCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSTTCEEEEES-CCSSHHHHTHHHHHHHH
T ss_pred c-------cCchhhhccCCCCEEEEEcCCCCcCCHHHHHHHHHhCCCCEEEEec-CCCCchhcCHHHHHHHH
Confidence 0 1123456778999999999999999999999999999999999999 99999999999999876
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-33 Score=267.42 Aligned_cols=260 Identities=19% Similarity=0.210 Sum_probs=174.7
Q ss_pred ecCC-eEEEEeecCCCCCCCCcEEEecCCC---CChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchh
Q 013006 141 WKPK-FNVHYEKAGCENVNSPPVLFLPGFG---VGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTE 216 (451)
Q Consensus 141 ~~~g-~~l~y~~~g~~~~~~p~VlllHG~~---~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~ 216 (451)
..+| .+++|...|++ ..|+|||+||++ .+...|..+++.|+++|+|+++|+||||.|+.+...
T Consensus 19 ~~~g~~~l~y~~~G~g--~~~~vvllHG~~pg~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~----------- 85 (291)
T 2wue_A 19 DVDGPLKLHYHEAGVG--NDQTVVLLHGGGPGAASWTNFSRNIAVLARHFHVLAVDQPGYGHSDKRAEH----------- 85 (291)
T ss_dssp ESSSEEEEEEEEECTT--CSSEEEEECCCCTTCCHHHHTTTTHHHHTTTSEEEEECCTTSTTSCCCSCC-----------
T ss_pred EeCCcEEEEEEecCCC--CCCcEEEECCCCCccchHHHHHHHHHHHHhcCEEEEECCCCCCCCCCCCCC-----------
Confidence 4589 99999999852 235999999998 788899999999988899999999999999764321
Q ss_pred hhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCC
Q 013006 217 EKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFS 296 (451)
Q Consensus 217 ~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~ 296 (451)
.|+++++++|+.++++++++++++||||||||.+++.+|.++|++|+++|++++.....
T Consensus 86 -------------------~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~-- 144 (291)
T 2wue_A 86 -------------------GQFNRYAAMALKGLFDQLGLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSI-- 144 (291)
T ss_dssp -------------------SSHHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCC--
T ss_pred -------------------CcCHHHHHHHHHHHHHHhCCCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCc--
Confidence 17999999999999999999999999999999999999999999999999999864210
Q ss_pred CCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHH
Q 013006 297 PNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASI 376 (451)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (451)
..... .+ ......+...+. ..........+...........+......+.....+.....+...
T Consensus 145 -~~~~~------------~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (291)
T 2wue_A 145 -NLFAP------------DP-TEGVKRLSKFSV--APTRENLEAFLRVMVYDKNLITPELVDQRFALASTPESLTATRAM 208 (291)
T ss_dssp -CSSSC------------SS-CHHHHHHHHHHH--SCCHHHHHHHHHTSCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHH
T ss_pred -ccccc------------cc-chhhHHHHHHhc--cCCHHHHHHHHHHhccCcccCCHHHHHHHHHHhcCchHHHHHHHH
Confidence 00000 00 011111111110 011111222221111111111112222222211222221111111
Q ss_pred HhcCCC-CCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 377 MFAPQG-NLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 377 ~~~~~~-~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
...... ..........+.++++|+|+|+|++|.++|++.++++++.+|++++++++++||++++|+|+++++.|
T Consensus 209 ~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~~~~i 283 (291)
T 2wue_A 209 GKSFAGADFEAGMMWREVYRLRQPVLLIWGREDRVNPLDGALVALKTIPRAQLHVFGQCGHWVQVEKFDEFNKLT 283 (291)
T ss_dssp HHHHTSTTGGGGCGGGTGGGCCSCEEEEEETTCSSSCGGGGHHHHHHSTTEEEEEESSCCSCHHHHTHHHHHHHH
T ss_pred HhhccccccccchhHHHHhhCCCCeEEEecCCCCCCCHHHHHHHHHHCCCCeEEEeCCCCCChhhhCHHHHHHHH
Confidence 100000 00001112457789999999999999999999999999999999999999999999999999999876
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-34 Score=269.69 Aligned_cols=260 Identities=20% Similarity=0.230 Sum_probs=172.8
Q ss_pred eeecCCeEEEEeecCCCCCCCCcEEEecCCCCChh-cHHHHHHhhcCCceEEEEcCCCCCCCCC-CCCCCCCCCCCCchh
Q 013006 139 WEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSF-HYEKQLKDLGKDYRAWAIDFLGQGMSLP-DEDPTPRSKEGDSTE 216 (451)
Q Consensus 139 ~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~-~~~~~~~~L~~~~~Vi~~D~rG~G~S~~-~~~~~~~~~~~~~~~ 216 (451)
+...+|.+++|...|++ ++|+|||+||++++.. .|..+++.|+++|+|+++|+||||.|+. +...
T Consensus 7 ~~~~~g~~l~~~~~G~~--~~~~vvllHG~~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~----------- 73 (286)
T 2yys_A 7 YVPVGEAELYVEDVGPV--EGPALFVLHGGPGGNAYVLREGLQDYLEGFRVVYFDQRGSGRSLELPQDP----------- 73 (286)
T ss_dssp EEECSSCEEEEEEESCT--TSCEEEEECCTTTCCSHHHHHHHGGGCTTSEEEEECCTTSTTSCCCCSCG-----------
T ss_pred EEeECCEEEEEEeecCC--CCCEEEEECCCCCcchhHHHHHHHHhcCCCEEEEECCCCCCCCCCCccCc-----------
Confidence 34468999999999963 5789999999999999 8999999998899999999999999975 3220
Q ss_pred hhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCC
Q 013006 217 EKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFS 296 (451)
Q Consensus 217 ~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~ 296 (451)
..++++++++|+.++++++++++++|+||||||.+|+.+|.++|+ |+++|++++.+.
T Consensus 74 ------------------~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~~---- 130 (286)
T 2yys_A 74 ------------------RLFTVDALVEDTLLLAEALGVERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWVN---- 130 (286)
T ss_dssp ------------------GGCCHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCCB----
T ss_pred ------------------ccCcHHHHHHHHHHHHHHhCCCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCccC----
Confidence 017999999999999999999999999999999999999999999 999999998531
Q ss_pred CCCCCchH-HhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHH
Q 013006 297 PNPIRSPK-LARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFAS 375 (451)
Q Consensus 297 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (451)
... ........+..+.......+...+ .. .........+. .+.......+......+.....+.....+
T Consensus 131 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 200 (286)
T 2yys_A 131 -----FPWLAARLAEAAGLAPLPDPEENLKEAL-KR-EEPKALFDRLM-FPTPRGRMAYEWLAEGAGILGSDAPGLAF-- 200 (286)
T ss_dssp -----HHHHHHHHHHHTTCCCCSCHHHHHHHHH-HH-SCHHHHHHHHH-CSSHHHHHHHHHHHHHTTCCCCSHHHHHH--
T ss_pred -----cHHHHHHHHHHhccccchhHHHHHHHHh-cc-CChHHHHHhhh-ccCCccccChHHHHHHHhhccccccchhh--
Confidence 111 001100000001111011111111 00 11111111100 00000000011111111111112112111
Q ss_pred HHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 376 IMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 376 ~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
.... ....+....+.++++|+|+|+|++|.+++++ .+++++ +|++++++++++||++++|+|+++++.|
T Consensus 201 ~~~~----~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~-~~~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~~i 269 (286)
T 2yys_A 201 LRNG----LWRLDYTPYLTPERRPLYVLVGERDGTSYPY-AEEVAS-RLRAPIRVLPEAGHYLWIDAPEAFEEAF 269 (286)
T ss_dssp HHTT----GGGCBCGGGCCCCSSCEEEEEETTCTTTTTT-HHHHHH-HHTCCEEEETTCCSSHHHHCHHHHHHHH
T ss_pred cccc----cccCChhhhhhhcCCCEEEEEeCCCCcCCHh-HHHHHh-CCCCCEEEeCCCCCCcChhhHHHHHHHH
Confidence 1110 0111234457789999999999999999999 999999 9999999999999999999999999876
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-33 Score=265.07 Aligned_cols=255 Identities=15% Similarity=0.147 Sum_probs=172.6
Q ss_pred cCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhc
Q 013006 142 KPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNF 220 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~ 220 (451)
.+|.+|+|...| ++++|||+||++.+...|..+++.|++ +|+|+++|+||||.|+.+...
T Consensus 10 ~~g~~l~y~~~g----~g~pvvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~--------------- 70 (277)
T 1brt_A 10 STSIDLYYEDHG----TGQPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTG--------------- 70 (277)
T ss_dssp TEEEEEEEEEEC----SSSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSC---------------
T ss_pred CCCcEEEEEEcC----CCCeEEEECCCCCcHHHHHHHHHHHhhCCCEEEEeCCCCCCCCCCCCCC---------------
Confidence 578999999998 357899999999999999999999976 699999999999999754321
Q ss_pred cccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCC-ccceEEEeccCCCCCCCCCC
Q 013006 221 LWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPH-LVKGVTLLNATPFWGFSPNP 299 (451)
Q Consensus 221 ~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~-~v~~lvl~~~~~~~~~~~~~ 299 (451)
++++++++|+.++++++++++++||||||||.+++.+|.++|+ +|+++|++++.+.......
T Consensus 71 ----------------~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~- 133 (277)
T 1brt_A 71 ----------------YDYDTFAADLNTVLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTD- 133 (277)
T ss_dssp ----------------CSHHHHHHHHHHHHHHHTCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBT-
T ss_pred ----------------ccHHHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCccccccc-
Confidence 7999999999999999999999999999999999999999999 9999999998532110000
Q ss_pred CCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhc----CCCChHHHHHHHHhhccChhHHHHHHH
Q 013006 300 IRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYAD----HATNVDTVFTRILETTQHPAAAASFAS 375 (451)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (451)
. .............+...... .............+.. .....+.....+.......... ....
T Consensus 134 -~---------~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 200 (277)
T 1brt_A 134 -D---------NPDGAAPQEFFDGIVAAVKA--DRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFF-AAAA 200 (277)
T ss_dssp -T---------BTTCSBCHHHHHHHHHHHHH--CHHHHHHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHHSCHH-HHHH
T ss_pred -c---------CccccccHHHHHHHHHHHhc--CchhhHHHHHHHHhhccccccccCCHHHHHHHHHHHhccchH-HHHH
Confidence 0 00000001111111111110 0011111222222211 1111122222222111111111 1111
Q ss_pred HHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHH-HHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 376 IMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWG-LQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 376 ~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~-~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
..... . .+....+.++++|+|+|+|++|.++|++.. +.+++.+|++++++++++||++++|+|+++++.|
T Consensus 201 ~~~~~--~---~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i 271 (277)
T 1brt_A 201 APTTW--Y---TDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTAL 271 (277)
T ss_dssp GGGGT--T---CCCTTTGGGCCSCEEEEEETTCSSSCGGGTHHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHHH
T ss_pred HHHHH--h---ccchhhcccCCCCeEEEecCCCccCChHHHHHHHHHHCCCCcEEEeCCCCcchhhhCHHHHHHHH
Confidence 11111 1 122345678999999999999999999888 8999999999999999999999999999999876
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-33 Score=266.01 Aligned_cols=253 Identities=16% Similarity=0.207 Sum_probs=169.8
Q ss_pred cCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhc
Q 013006 142 KPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNF 220 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~ 220 (451)
.+|.+++|...| ++++|||+||++++...|..+++.|. ++|+|+++|+||||.|+.+...
T Consensus 14 ~~g~~l~y~~~G----~g~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~--------------- 74 (281)
T 3fob_A 14 QAPIEIYYEDHG----TGKPVVLIHGWPLSGRSWEYQVPALVEAGYRVITYDRRGFGKSSQPWEG--------------- 74 (281)
T ss_dssp TEEEEEEEEEES----SSEEEEEECCTTCCGGGGTTTHHHHHHTTEEEEEECCTTSTTSCCCSSC---------------
T ss_pred CCceEEEEEECC----CCCeEEEECCCCCcHHHHHHHHHHHHhCCCEEEEeCCCCCCCCCCCccc---------------
Confidence 478999999999 36899999999999999999999995 5799999999999999754322
Q ss_pred cccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHh-CCCccceEEEeccCCCCCCCCCC
Q 013006 221 LWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAAC-NPHLVKGVTLLNATPFWGFSPNP 299 (451)
Q Consensus 221 ~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~-~P~~v~~lvl~~~~~~~~~~~~~ 299 (451)
++++++++|+.++++++++++++|+||||||++++.+++. +|++|+++|++++.+........
T Consensus 75 ----------------~~~~~~a~dl~~ll~~l~~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 138 (281)
T 3fob_A 75 ----------------YEYDTFTSDLHQLLEQLELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSED 138 (281)
T ss_dssp ----------------CSHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSS
T ss_pred ----------------cCHHHHHHHHHHHHHHcCCCcEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhcccc
Confidence 7999999999999999999999999999999988877766 48999999999986432110000
Q ss_pred CCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCC---CChHHHHHHHHhhcc--ChhH-HHHH
Q 013006 300 IRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHA---TNVDTVFTRILETTQ--HPAA-AASF 373 (451)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~~-~~~~ 373 (451)
+............+....... .......+....+.... ...+........... .+.. ...+
T Consensus 139 -----------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (281)
T 3fob_A 139 -----------HPEGALDDATIETFKSGVIND--RLAFLDEFTKGFFAAGDRTDLVSESFRLYNWDIAAGASPKGTLDCI 205 (281)
T ss_dssp -----------STTCSBCHHHHHHHHHHHHHH--HHHHHHHHHHHHTCBTTBCCSSCHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred -----------ccccccchhHHHHHHHHhhhh--HHHHHHHHHHHhcccccccccchHHHHHHhhhhhcccChHHHHHHH
Confidence 000000001111111111100 01112222222322211 111111111111111 1111 1111
Q ss_pred HHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHH-HHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 374 ASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWG-LQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~-~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
..+. ..+....+.++++|||+|+|++|.++|++.. +.+++.+|++++++++++||++++|+|++|++.|
T Consensus 206 ~~~~--------~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~~~~i 275 (281)
T 3fob_A 206 TAFS--------KTDFRKDLEKFNIPTLIIHGDSDATVPFEYSGKLTHEAIPNSKVALIKGGPHGLNATHAKEFNEAL 275 (281)
T ss_dssp HHHH--------HCCCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHH
T ss_pred HHcc--------ccchhhhhhhcCCCEEEEecCCCCCcCHHHHHHHHHHhCCCceEEEeCCCCCchhhhhHHHHHHHH
Confidence 1110 1123345678999999999999999999865 7778899999999999999999999999999876
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-33 Score=270.98 Aligned_cols=267 Identities=15% Similarity=0.156 Sum_probs=174.6
Q ss_pred cceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCch
Q 013006 136 SCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDST 215 (451)
Q Consensus 136 ~~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~ 215 (451)
..+++ .+|.+++|...|++ .+|+|||+||++++...|..+++.|+++|+||++|+||||.|+.+..
T Consensus 9 ~~~~~-~~g~~l~y~~~G~g--~~~pvvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~----------- 74 (316)
T 3afi_E 9 IRRAP-VLGSSMAYRETGAQ--DAPVVLFLHGNPTSSHIWRNILPLVSPVAHCIAPDLIGFGQSGKPDI----------- 74 (316)
T ss_dssp -CEEE-ETTEEEEEEEESCT--TSCEEEEECCTTCCGGGGTTTHHHHTTTSEEEEECCTTSTTSCCCSS-----------
T ss_pred ceeEE-eCCEEEEEEEeCCC--CCCeEEEECCCCCchHHHHHHHHHHhhCCEEEEECCCCCCCCCCCCC-----------
Confidence 33443 47999999999952 23499999999999999999999999889999999999999975422
Q ss_pred hhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCC
Q 013006 216 EEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGF 295 (451)
Q Consensus 216 ~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~ 295 (451)
.|+++++++|+.++++++++++++||||||||.+|+.+|.++|++|+++|++++.+....
T Consensus 75 --------------------~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~ 134 (316)
T 3afi_E 75 --------------------AYRFFDHVRYLDAFIEQRGVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPT 134 (316)
T ss_dssp --------------------CCCHHHHHHHHHHHHHHTTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEECCCBSS
T ss_pred --------------------CCCHHHHHHHHHHHHHHcCCCCEEEEEeCccHHHHHHHHHHCHHhhhheeeeccCCCcch
Confidence 189999999999999999999999999999999999999999999999999997431000
Q ss_pred CCCCC---CchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHH-------HHHHHHhhc--CCCChHHHHHHHHhh
Q 013006 296 SPNPI---RSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIA-------EVLKQVYAD--HATNVDTVFTRILET 363 (451)
Q Consensus 296 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~--~~~~~~~~~~~~~~~ 363 (451)
..... ....... ........ .....+.... .+....+.. .....++....+...
T Consensus 135 ~~~~~~~~~~~~~~~----------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (316)
T 3afi_E 135 WQDFHHTEVAEEQDH----------AEAARAVF----RKFRTPGEGEAMILEANAFVERVLPGGIVRKLGDEEMAPYRTP 200 (316)
T ss_dssp GGGTTCCCCGGGHHH----------HHHHHHHH----HHHTSTTHHHHHHTTSCHHHHTTTGGGCSSCCCHHHHHHHHTT
T ss_pred hhhccchhhcccccc----------chhHHHHH----HHhcCCchhhHHHhccchHHHHhcccccCCCCCHHHHHHHHhh
Confidence 00000 0000000 00000000 0000110000 001111110 011112222222222
Q ss_pred ccChhHHHHHHHHHhcCCCCC-------chhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCC
Q 013006 364 TQHPAAAASFASIMFAPQGNL-------SFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGH 436 (451)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH 436 (451)
...+.....+........... ...+....++++++|||+|+|++|.++|++..+++++.+|++++++++++||
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~GH 280 (316)
T 3afi_E 201 FPTPESRRPVLAFPRELPIAGEPADVYEALQSAHAALAASSYPKLLFTGEPGALVSPEFAERFAASLTRCALIRLGAGLH 280 (316)
T ss_dssp CCSTGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHSSSEEEEEEEEECS
T ss_pred cCCccchhHHHHHHHhccccccchhhhhHHHHHHHhhhccCCCeEEEecCCCCccCHHHHHHHHHhCCCCeEEEcCCCCC
Confidence 222222112111111110000 0112233456789999999999999999999999999999999999999999
Q ss_pred CccccChHHHHhhh
Q 013006 437 CPHDEVPEVCSLCL 450 (451)
Q Consensus 437 ~~~~e~p~~v~~~I 450 (451)
++++|+|++|++.|
T Consensus 281 ~~~~e~p~~~~~~i 294 (316)
T 3afi_E 281 YLQEDHADAIGRSV 294 (316)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CchhhCHHHHHHHH
Confidence 99999999999876
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-33 Score=261.24 Aligned_cols=259 Identities=19% Similarity=0.163 Sum_probs=168.7
Q ss_pred eeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchh
Q 013006 138 FWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTE 216 (451)
Q Consensus 138 ~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~ 216 (451)
+++..||.+|+|...| ++++|||+||++++...|..+++.|.+ +|+|+++|+||||.|+.+...
T Consensus 2 ~~~~~~g~~l~y~~~G----~g~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~----------- 66 (271)
T 3ia2_A 2 TFVAKDGTQIYFKDWG----SGKPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTG----------- 66 (271)
T ss_dssp EEECTTSCEEEEEEES----SSSEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTSCCCSSC-----------
T ss_pred eEEcCCCCEEEEEccC----CCCeEEEECCCCCcHHHHHHHHHHHHhCCceEEEecCCCCccCCCCCCC-----------
Confidence 4677899999999999 468999999999999999999999964 799999999999999754322
Q ss_pred hhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhC-CCccceEEEeccCCCCCC
Q 013006 217 EKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACN-PHLVKGVTLLNATPFWGF 295 (451)
Q Consensus 217 ~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~-P~~v~~lvl~~~~~~~~~ 295 (451)
++++++++|+.+++++++.++++|+||||||++++.+++++ |++|+++|++++.+....
T Consensus 67 --------------------~~~~~~a~d~~~~l~~l~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~ 126 (271)
T 3ia2_A 67 --------------------NDYDTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFG 126 (271)
T ss_dssp --------------------CSHHHHHHHHHHHHHHHTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCB
T ss_pred --------------------CCHHHHHHHHHHHHHHhCCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCcccc
Confidence 79999999999999999999999999999999777666654 999999999997542110
Q ss_pred CCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcC--CCChHHHHHHHHhhccChhHHHHH
Q 013006 296 SPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADH--ATNVDTVFTRILETTQHPAAAASF 373 (451)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 373 (451)
... .+..... ......+....... ............+... ....+..................+
T Consensus 127 ~~~-----------~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (271)
T 3ia2_A 127 QKP-----------DYPQGVP-LDVFARFKTELLKD--RAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATV 192 (271)
T ss_dssp CBT-----------TBTTSBC-HHHHHHHHHHHHHH--HHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHH
T ss_pred CCC-----------CCccccc-HHHHHHHHHHHHhh--HHHHHHHhhHhhhccccccccCHHHHHHHHhhhhhccHHHHH
Confidence 000 0000000 01111111111000 0001111111111111 011111111111100000000000
Q ss_pred HHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHH-HHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 374 ASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVW-GLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~-~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
..... +...+....+.++++|+|+|+|++|.++|++. .+.+.+.+|++++.+++++||+++.|+|+++++.|
T Consensus 193 ~~~~~-----~~~~~~~~~l~~i~~P~Lvi~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i 265 (271)
T 3ia2_A 193 DCVTA-----FAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDL 265 (271)
T ss_dssp HHHHH-----HHHCBCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHH
T ss_pred HHHHH-----hhccCCcccccCCCCCEEEEEeCCCCcCChHHHHHHHHHhCCCceEEEEcCCCCcccccCHHHHHHHH
Confidence 00000 00012234567899999999999999999987 56667788999999999999999999999999876
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-32 Score=259.24 Aligned_cols=255 Identities=20% Similarity=0.237 Sum_probs=172.3
Q ss_pred ecCCeEEEEeecCCCCCCCCc-EEEecCCC---CChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchh
Q 013006 141 WKPKFNVHYEKAGCENVNSPP-VLFLPGFG---VGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTE 216 (451)
Q Consensus 141 ~~~g~~l~y~~~g~~~~~~p~-VlllHG~~---~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~ 216 (451)
..+|.+++|...|+ ++++ |||+||++ .+...|..+++.|+++|+|+++|+||||.|..+...
T Consensus 13 ~~~g~~l~y~~~g~---~g~p~vvllHG~~~~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~----------- 78 (285)
T 1c4x_A 13 PSGTLASHALVAGD---PQSPAVVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPDLIGFGQSEYPETY----------- 78 (285)
T ss_dssp CCTTSCEEEEEESC---TTSCEEEEECCCSTTCCHHHHHGGGHHHHHTTSEEEEECCTTSTTSCCCSSC-----------
T ss_pred EECCEEEEEEecCC---CCCCEEEEEeCCCCCCcchhhHHHHHHHHhhCcEEEEecCCCCCCCCCCCCc-----------
Confidence 34789999999984 2445 99999998 778899999999988899999999999999754321
Q ss_pred hhhccccCCCCCCccccccccCHHHH----HHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCC
Q 013006 217 EKNFLWGFGDKAQPWASELAYSVDLW----QDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPF 292 (451)
Q Consensus 217 ~~~~~w~~~~~~~~~~~~~~~s~~~~----a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~ 292 (451)
.++++++ ++|+.++++++++++++|+||||||.+++.+|.++|++|+++|++++...
T Consensus 79 -------------------~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 139 (285)
T 1c4x_A 79 -------------------PGHIMSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGA 139 (285)
T ss_dssp -------------------CSSHHHHHHHHHHHHHHHHHHHTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSS
T ss_pred -------------------ccchhhhhhhHHHHHHHHHHHhCCCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCC
Confidence 1799999 99999999999999999999999999999999999999999999998642
Q ss_pred CCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCC--hHHHHHHHHhhccChhHH
Q 013006 293 WGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATN--VDTVFTRILETTQHPAAA 370 (451)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 370 (451)
.. ............+... + ........+.......... .+............+...
T Consensus 140 ~~----~~~~~~~~~~~~~~~~-~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (285)
T 1c4x_A 140 PM----NARPPELARLLAFYAD-P-----------------RLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVR 197 (285)
T ss_dssp CC----SSCCHHHHHHHTGGGS-C-----------------CHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHH
T ss_pred CC----CccchhHHHHHHHhcc-c-----------------cHHHHHHHHHHhhcCcccccCcHHHHHHHHHhccCHHHH
Confidence 10 0001111111111100 0 0011111111111111100 112111111111122222
Q ss_pred HHHHHHHh-cCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhh
Q 013006 371 ASFASIMF-APQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLC 449 (451)
Q Consensus 371 ~~~~~~~~-~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~ 449 (451)
..+..... ..............+.++++|+|+|+|++|.++|++..+.+++.+|++++++++++||++++|+|+++++.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~ 277 (285)
T 1c4x_A 198 RIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVPLDTSLYLTKHLKHAELVVLDRCGHWAQLERWDAMGPM 277 (285)
T ss_dssp HHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEETTCSSSCTHHHHHHHHHCSSEEEEEESSCCSCHHHHSHHHHHHH
T ss_pred HHHHHHhccccccccccccchhhhccCCCCEEEEEeCCCeeeCHHHHHHHHHhCCCceEEEeCCCCcchhhcCHHHHHHH
Confidence 22221110 00000001112245678999999999999999999999999999999999999999999999999999987
Q ss_pred h
Q 013006 450 L 450 (451)
Q Consensus 450 I 450 (451)
|
T Consensus 278 i 278 (285)
T 1c4x_A 278 L 278 (285)
T ss_dssp H
T ss_pred H
Confidence 6
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-33 Score=257.68 Aligned_cols=243 Identities=15% Similarity=0.188 Sum_probs=164.5
Q ss_pred EEEEeecCCCCC-CCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccC
Q 013006 146 NVHYEKAGCENV-NSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGF 224 (451)
Q Consensus 146 ~l~y~~~g~~~~-~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~ 224 (451)
+|+|...|+.++ ++++|||+||++++...|..+++.|+++|+|+++|+||||.|.....
T Consensus 2 ~l~y~~~G~~~~~~~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~-------------------- 61 (255)
T 3bf7_A 2 KLNIRAQTAQNQHNNSPIVLVHGLFGSLDNLGVLARDLVNDHNIIQVDVRNHGLSPREPV-------------------- 61 (255)
T ss_dssp CCCEEEECCSSCCCCCCEEEECCTTCCTTTTHHHHHHHTTTSCEEEECCTTSTTSCCCSC--------------------
T ss_pred ceeeeecCccccCCCCCEEEEcCCcccHhHHHHHHHHHHhhCcEEEecCCCCCCCCCCCC--------------------
Confidence 578888886422 57899999999999999999999998889999999999999975421
Q ss_pred CCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchH
Q 013006 225 GDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPK 304 (451)
Q Consensus 225 ~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~ 304 (451)
++++++++|+.++++++++++++||||||||.+++.+|.++|++|+++|++++.+.... ....
T Consensus 62 ------------~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~--~~~~--- 124 (255)
T 3bf7_A 62 ------------MNYPAMAQDLVDTLDALQIDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYH--VRRH--- 124 (255)
T ss_dssp ------------CCHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCC--SCCC---
T ss_pred ------------cCHHHHHHHHHHHHHHcCCCCeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCC--cccH---
Confidence 68999999999999999999999999999999999999999999999999987542111 0000
Q ss_pred HhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChh---HHHHHHHHHhcCC
Q 013006 305 LARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPA---AAASFASIMFAPQ 381 (451)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 381 (451)
......+.................+ .... ........+........ ....+...+..
T Consensus 125 -------------~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 184 (255)
T 3bf7_A 125 -------------DEIFAAINAVSESDAQTRQQAAAIM----RQHL-NEEGVIQFLLKSFVDGEWRFNVPVLWDQYPH-- 184 (255)
T ss_dssp -------------HHHHHHHHHHHHSCCCSHHHHHHHH----TTTC-CCHHHHHHHHTTEETTEESSCHHHHHHTHHH--
T ss_pred -------------HHHHHHHHhccccccccHHHHHHHH----hhhc-chhHHHHHHHHhccCCceeecHHHHHhhhhh--
Confidence 0001111110000000111111111 0000 00111111111100000 00000000000
Q ss_pred CCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 382 GNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 382 ~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
......+.++++|+|+|+|++|.+++++..+.+++.+|++++++++++||++++|+|+++++.|
T Consensus 185 -----~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i 248 (255)
T 3bf7_A 185 -----IVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQFPQARAHVIAGAGHWVHAEKPDAVLRAI 248 (255)
T ss_dssp -----HHCCCCCCCCCSCEEEECBTTCSTTCGGGHHHHHHHCTTEEECCBTTCCSCHHHHCHHHHHHHH
T ss_pred -----ccccccccccCCCeEEEECCCCCCCCHHHHHHHHHHCCCCeEEEeCCCCCccccCCHHHHHHHH
Confidence 0000235678999999999999999999999999999999999999999999999999999876
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-32 Score=259.00 Aligned_cols=261 Identities=17% Similarity=0.173 Sum_probs=171.5
Q ss_pred eeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchh
Q 013006 138 FWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTE 216 (451)
Q Consensus 138 ~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~ 216 (451)
+++..+|.+|+|..+|+. ++|+|||+||++++...|..+++.|++ +|+|+++|+||||.|+.+...
T Consensus 3 ~~~~~~g~~l~y~~~g~~--~~~~vvllHG~~~~~~~w~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~----------- 69 (276)
T 1zoi_A 3 YVTTKDGVQIFYKDWGPR--DAPVIHFHHGWPLSADDWDAQLLFFLAHGYRVVAHDRRGHGRSSQVWDG----------- 69 (276)
T ss_dssp EEECTTSCEEEEEEESCT--TSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSC-----------
T ss_pred eEECCCCcEEEEEecCCC--CCCeEEEECCCCcchhHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCC-----------
Confidence 456678999999999863 468999999999999999999999965 699999999999999754221
Q ss_pred hhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhC-CCccceEEEeccCCCCCC
Q 013006 217 EKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACN-PHLVKGVTLLNATPFWGF 295 (451)
Q Consensus 217 ~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~-P~~v~~lvl~~~~~~~~~ 295 (451)
++++++++|+.++++++++++++|+||||||.+++.+|+++ |++|+++|++++.+....
T Consensus 70 --------------------~~~~~~~~d~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~ 129 (276)
T 1zoi_A 70 --------------------HDMDHYADDVAAVVAHLGIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMV 129 (276)
T ss_dssp --------------------CSHHHHHHHHHHHHHHHTCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCB
T ss_pred --------------------CCHHHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCcccc
Confidence 79999999999999999999999999999999999988887 999999999998542111
Q ss_pred CCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHH-HHhhcC---CCChHHHHHHHHhhccChhHHH
Q 013006 296 SPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLK-QVYADH---ATNVDTVFTRILETTQHPAAAA 371 (451)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 371 (451)
.... +.... .......+...... ........... ..+... ....+.....+...........
T Consensus 130 ~~~~-----------~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (276)
T 1zoi_A 130 QTPG-----------NPGGL-PKSVFDGFQAQVAS--NRAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAKA 195 (276)
T ss_dssp CCSS-----------CTTSB-CHHHHHHHHHHHHH--CHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHH
T ss_pred cccc-----------ccccc-cHHHHHHHHHHHHH--hHHHHHHHhhhccccccccccccccHHHHHHHHhhhhhhhHHH
Confidence 0000 00000 00111111111100 00011111111 111100 0011122222111100000000
Q ss_pred HHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChH-HHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 372 SFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPV-WGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~-~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
.+....... .. +....++++++|+|+|+|++|.++|++ ..+.+.+.+|++++++++++||++++|+|+++++.|
T Consensus 196 ~~~~~~~~~--~~---~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i 270 (276)
T 1zoi_A 196 HYDGIVAFS--QT---DFTEDLKGIQQPVLVMHGDDDQIVPYENSGVLSAKLLPNGALKTYKGYPHGMPTTHADVINADL 270 (276)
T ss_dssp HHHHHHHHH--SC---CCHHHHHHCCSCEEEEEETTCSSSCSTTTHHHHHHHSTTEEEEEETTCCTTHHHHTHHHHHHHH
T ss_pred HHHHHHHhc--cc---chhhhccccCCCEEEEEcCCCcccChHHHHHHHHhhCCCceEEEcCCCCCchhhhCHHHHHHHH
Confidence 000000000 01 122345678999999999999999987 566788889999999999999999999999999876
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-33 Score=264.12 Aligned_cols=247 Identities=21% Similarity=0.251 Sum_probs=169.5
Q ss_pred ecCCeEEEEeecCCCCCCCCcEEEecCCC---CChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhh
Q 013006 141 WKPKFNVHYEKAGCENVNSPPVLFLPGFG---VGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEE 217 (451)
Q Consensus 141 ~~~g~~l~y~~~g~~~~~~p~VlllHG~~---~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~ 217 (451)
..+|.+++|...|. +++|||+||++ .+...|..+++.|+++|+|+++|+||||.|. +...
T Consensus 22 ~~~g~~l~y~~~g~----g~~vvllHG~~~~~~~~~~~~~~~~~L~~~~~vi~~Dl~G~G~S~-~~~~------------ 84 (296)
T 1j1i_A 22 NAGGVETRYLEAGK----GQPVILIHGGGAGAESEGNWRNVIPILARHYRVIAMDMLGFGKTA-KPDI------------ 84 (296)
T ss_dssp EETTEEEEEEEECC----SSEEEEECCCSTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSC-CCSS------------
T ss_pred EECCEEEEEEecCC----CCeEEEECCCCCCcchHHHHHHHHHHHhhcCEEEEECCCCCCCCC-CCCC------------
Confidence 35799999999983 58999999998 7788899999999888999999999999997 3221
Q ss_pred hhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCC-CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCC
Q 013006 218 KNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR-EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFS 296 (451)
Q Consensus 218 ~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~-~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~ 296 (451)
.++++++++|+.++++++++ ++++||||||||.+++.+|.++|++|+++|++++.+...
T Consensus 85 ------------------~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~-- 144 (296)
T 1j1i_A 85 ------------------EYTQDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVV-- 144 (296)
T ss_dssp ------------------CCCHHHHHHHHHHHHHHSCCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCC--
T ss_pred ------------------CCCHHHHHHHHHHHHHhcCCCCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCC--
Confidence 17999999999999999999 899999999999999999999999999999999864210
Q ss_pred CCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHH
Q 013006 297 PNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASI 376 (451)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (451)
.. .........+ .+.... ....+...........+............+.....+...
T Consensus 145 -~~--~~~~~~~~~~---~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (296)
T 1j1i_A 145 -EI--HEDLRPIINY---DFTREG-----------------MVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVAT 201 (296)
T ss_dssp -C------------C---CSCHHH-----------------HHHHHHHHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred -CC--CchHHHHhcc---cCCchH-----------------HHHHHHHhccCcccccHHHHHHHHHHhhCcchhhHHHHH
Confidence 00 0001111110 010111 111111111111111111111111111111111111111
Q ss_pred Hhc---CCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 377 MFA---PQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 377 ~~~---~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
... ..... .....+.++++|+|+|+|++|.++|++..+++.+.+|++++++++++||++++|+|+++++.|
T Consensus 202 ~~~~~~~~~~~---~~~~~l~~i~~P~Lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i 275 (296)
T 1j1i_A 202 MQWIREQGGLF---YDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLIDDSWGYIIPHCGHWAMIEHPEDFANAT 275 (296)
T ss_dssp HHHHHHHTSSB---CCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCTTEEEEEESSCCSCHHHHSHHHHHHHH
T ss_pred HHHHHhccccc---ccHHHhhcCCCCEEEEEECCCcccCHHHHHHHHHHCCCCEEEEECCCCCCchhcCHHHHHHHH
Confidence 100 00011 122345778999999999999999999999999999999999999999999999999999876
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-33 Score=268.43 Aligned_cols=272 Identities=18% Similarity=0.191 Sum_probs=171.7
Q ss_pred ccceeeecCCeEEEEeecCCCCCC--CCcEEEecCCCCChhcHHHHHHhhc--CCceEEEEcCCCCCCCCCCCCCCCCCC
Q 013006 135 TSCFWEWKPKFNVHYEKAGCENVN--SPPVLFLPGFGVGSFHYEKQLKDLG--KDYRAWAIDFLGQGMSLPDEDPTPRSK 210 (451)
Q Consensus 135 ~~~~~~~~~g~~l~y~~~g~~~~~--~p~VlllHG~~~~~~~~~~~~~~L~--~~~~Vi~~D~rG~G~S~~~~~~~~~~~ 210 (451)
...++. .+|.+++|+..|+.+.. ++||||+||++++...|..++..|+ .+|+||++|+||||.|+..+....
T Consensus 29 ~~~~v~-~~g~~l~y~~~G~~~~~~~g~plvllHG~~~~~~~w~~~~~~l~~~~~~~Via~D~rG~G~S~~~~~~~~--- 104 (330)
T 3nwo_A 29 SSRTVP-FGDHETWVQVTTPENAQPHALPLIVLHGGPGMAHNYVANIAALADETGRTVIHYDQVGCGNSTHLPDAPA--- 104 (330)
T ss_dssp CEEEEE-ETTEEEEEEEECCSSCCTTCCCEEEECCTTTCCSGGGGGGGGHHHHHTCCEEEECCTTSTTSCCCTTSCG---
T ss_pred cceeEe-ecCcEEEEEEecCccCCCCCCcEEEECCCCCCchhHHHHHHHhccccCcEEEEECCCCCCCCCCCCCCcc---
Confidence 334444 47999999999974333 4589999999999999999998887 589999999999999975322100
Q ss_pred CCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 211 EGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 211 ~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
..|+++++++|+.++++++++++++||||||||++++.+|.++|++|+++|++++.
T Consensus 105 ------------------------~~~~~~~~a~dl~~ll~~lg~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~ 160 (330)
T 3nwo_A 105 ------------------------DFWTPQLFVDEFHAVCTALGIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSP 160 (330)
T ss_dssp ------------------------GGCCHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCC
T ss_pred ------------------------ccccHHHHHHHHHHHHHHcCCCceEEEecCHHHHHHHHHHHhCCccceEEEEecCC
Confidence 12799999999999999999999999999999999999999999999999999975
Q ss_pred CCCCCCCCCCCchHHhh-hcCCCCCCCChHH-HHHHHHHHH-HhcCChHHHH---HHHHHHhhcCCCChHHHHHHHHhhc
Q 013006 291 PFWGFSPNPIRSPKLAR-ILPWSGTFPLPAS-VRKLIEFIW-QKISDPESIA---EVLKQVYADHATNVDTVFTRILETT 364 (451)
Q Consensus 291 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (451)
+. ...... ...... .++.. ...+..... .....+.... .+............+.....+....
T Consensus 161 ~~---------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (330)
T 3nwo_A 161 AS---------MRLWSEAAGDLRA--QLPAETRAALDRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDFADSVAQME 229 (330)
T ss_dssp SB---------HHHHHHHHHHHHH--HSCHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHTCCSSSCCHHHHHHHHHHH
T ss_pred cc---------hHHHHHHHHHHHH--hcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHhhccccCCCHHHHHHHHhhc
Confidence 32 000000 000000 00000 000000000 0011111110 1111111100001111111111000
Q ss_pred cChhHHHHHHHHHhcC-----CCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCcc
Q 013006 365 QHPAAAASFASIMFAP-----QGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPH 439 (451)
Q Consensus 365 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~ 439 (451)
..+.. +. .+... .......+....+.++++|||+|+|++|.++| ...+++++.+|++++++++++||+++
T Consensus 230 ~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~p-~~~~~~~~~ip~~~~~~i~~~gH~~~ 304 (330)
T 3nwo_A 230 AEPTV---YH-TMNGPNEFHVVGTLGDWSVIDRLPDVTAPVLVIAGEHDEATP-KTWQPFVDHIPDVRSHVFPGTSHCTH 304 (330)
T ss_dssp HSCHH---HH-HHTCSCSSSCCSGGGGCBCGGGGGGCCSCEEEEEETTCSSCH-HHHHHHHHHCSSEEEEEETTCCTTHH
T ss_pred cchhh---hh-cccCchhhhhhccccCCchhhhcccCCCCeEEEeeCCCccCh-HHHHHHHHhCCCCcEEEeCCCCCchh
Confidence 01100 00 01000 00111113345678899999999999999876 46788999999999999999999999
Q ss_pred ccChHHHHhhh
Q 013006 440 DEVPEVCSLCL 450 (451)
Q Consensus 440 ~e~p~~v~~~I 450 (451)
+|+|++|++.|
T Consensus 305 ~e~p~~~~~~i 315 (330)
T 3nwo_A 305 LEKPEEFRAVV 315 (330)
T ss_dssp HHSHHHHHHHH
T ss_pred hcCHHHHHHHH
Confidence 99999999876
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-32 Score=257.76 Aligned_cols=259 Identities=16% Similarity=0.207 Sum_probs=171.2
Q ss_pred eeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchh
Q 013006 138 FWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTE 216 (451)
Q Consensus 138 ~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~ 216 (451)
+++..+|.+|+|..+| ++++|||+||++.+...|..++..|.+ +|+|+++|+||||.|..+..
T Consensus 2 ~~~~~~g~~l~y~~~g----~g~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~------------ 65 (274)
T 1a8q_A 2 ICTTRDGVEIFYKDWG----QGRPVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWD------------ 65 (274)
T ss_dssp EEECTTSCEEEEEEEC----SSSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS------------
T ss_pred eEEccCCCEEEEEecC----CCceEEEECCCcchHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCC------------
Confidence 4667789999999998 468999999999999999999999965 69999999999999975322
Q ss_pred hhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhC-CCccceEEEeccCCCCCC
Q 013006 217 EKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACN-PHLVKGVTLLNATPFWGF 295 (451)
Q Consensus 217 ~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~-P~~v~~lvl~~~~~~~~~ 295 (451)
.++++++++|+.+++++++.++++|+||||||.+++.+|+++ |++|+++|++++.+....
T Consensus 66 -------------------~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~ 126 (274)
T 1a8q_A 66 -------------------GYDFDTFADDLNDLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMI 126 (274)
T ss_dssp -------------------CCSHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCB
T ss_pred -------------------CCcHHHHHHHHHHHHHHcCCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCcccc
Confidence 179999999999999999999999999999999999988876 999999999998542111
Q ss_pred CCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcC---CCChHHHHHHHHhhccChhHHHH
Q 013006 296 SPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADH---ATNVDTVFTRILETTQHPAAAAS 372 (451)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 372 (451)
... .+..... ......+....... ............+... ....+.....+............
T Consensus 127 ~~~-----------~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (274)
T 1a8q_A 127 KSD-----------KNPDGVP-DEVFDALKNGVLTE--RSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGG 192 (274)
T ss_dssp CCS-----------SCTTSBC-HHHHHHHHHHHHHH--HHHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHH
T ss_pred ccc-----------cCcccch-HHHHHHHHHHhhcc--HHHHHHHhcccccccccccccccHHHHHHHHHHhhhcChHHH
Confidence 000 0000000 01111111111000 0001111111111111 00112222222211111111111
Q ss_pred HHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChH-HHHHHHHHCCCCcEEEeCCCCCCcccc--ChHHHHhh
Q 013006 373 FASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPV-WGLQVKRQVPEAPYYEISPAGHCPHDE--VPEVCSLC 449 (451)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~-~~~~l~~~lp~~~~~~i~~~gH~~~~e--~p~~v~~~ 449 (451)
+..... ....+....+.++++|+|+|+|++|.++|++ ..+.+.+.+|++++++++++||++++| +|+++++.
T Consensus 193 ~~~~~~-----~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~p~~~~~~ 267 (274)
T 1a8q_A 193 VRCVDA-----FGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAMVPGDKEKFNRD 267 (274)
T ss_dssp HHHHHH-----HHHCCCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTTTTSTTHHHHHHHH
T ss_pred HHHHhh-----hhcCcHHHHhhcCCCCEEEEecCcCCCCCcHHHHHHHHhhCCCceEEEECCCCCceecccCCHHHHHHH
Confidence 110000 0001223456789999999999999999988 556777889999999999999999999 99999987
Q ss_pred h
Q 013006 450 L 450 (451)
Q Consensus 450 I 450 (451)
|
T Consensus 268 i 268 (274)
T 1a8q_A 268 L 268 (274)
T ss_dssp H
T ss_pred H
Confidence 6
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-33 Score=267.72 Aligned_cols=258 Identities=16% Similarity=0.161 Sum_probs=166.8
Q ss_pred eEEEEeecCCCCCC-CCcEEEecCCCCChhcHHHHHHhhcCC-ceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccc
Q 013006 145 FNVHYEKAGCENVN-SPPVLFLPGFGVGSFHYEKQLKDLGKD-YRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLW 222 (451)
Q Consensus 145 ~~l~y~~~g~~~~~-~p~VlllHG~~~~~~~~~~~~~~L~~~-~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w 222 (451)
.+++|...|+. + +|+|||+||++.++..|+.+++.|++. |+||++|+||||.|+.+...
T Consensus 34 ~~l~y~~~G~~--~~g~~vvllHG~~~~~~~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~~~----------------- 94 (310)
T 1b6g_A 34 LRAHYLDEGNS--DAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDE----------------- 94 (310)
T ss_dssp CEEEEEEEECT--TCSCEEEECCCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCEESCG-----------------
T ss_pred eEEEEEEeCCC--CCCCEEEEECCCCCchhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCc-----------------
Confidence 99999999853 4 689999999999999999999999875 99999999999999754321
Q ss_pred cCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCc
Q 013006 223 GFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRS 302 (451)
Q Consensus 223 ~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~ 302 (451)
..|+++++++|+.++++++++++++||||||||.+|+.+|.++|++|+++|++++.... .+.. .
T Consensus 95 ------------~~y~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~~--~~~~--~ 158 (310)
T 1b6g_A 95 ------------EDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMT--DPVT--Q 158 (310)
T ss_dssp ------------GGCCHHHHHHHHHHHHHHHTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCC--CTTT--C
T ss_pred ------------CCcCHHHHHHHHHHHHHHcCCCCEEEEEcChHHHHHHHHHHhChHhheEEEEecccccc--CCcc--c
Confidence 12899999999999999999999999999999999999999999999999999984310 0100 0
Q ss_pred hHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhH---HHHHHHHHhc
Q 013006 303 PKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAA---AASFASIMFA 379 (451)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 379 (451)
........ ... .................. ........ ....+.....+......... ...+......
T Consensus 159 ~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (310)
T 1b6g_A 159 PAFSAFVT---QPA--DGFTAWKYDLVTPSDLRL--DQFMKRWA---PTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQ 228 (310)
T ss_dssp THHHHTTT---SST--TTHHHHHHHHHSCSSCCH--HHHHHHHS---TTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHS
T ss_pred cchhhhhh---ccc--hHHHHHHHHhccCchhhh--hhHHhhcC---CCCCHHHHHHHhcccCCccchHHHHHHHHHhcc
Confidence 00000000 000 000000000000000000 00000000 00111111111111111110 0111111100
Q ss_pred CCCCC---chhHHhhhcc-CCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEe--CCCCCCccccChHHHHhhh
Q 013006 380 PQGNL---SFREALSRCQ-MNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEI--SPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 380 ~~~~~---~~~~~~~~l~-~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i--~~~gH~~~~e~p~~v~~~I 450 (451)
. ... ...+....+. ++++|||+|+|++|.+++ +..+.+++.+|+++++++ +++||++++ +|++|++.|
T Consensus 229 ~-~~~~~~~~~~~~~~l~~~i~~P~Lvi~G~~D~~~~-~~~~~~~~~ip~~~~~~i~~~~~GH~~~~-~p~~~~~~i 302 (310)
T 1b6g_A 229 R-DQAXIDISTEAISFWQNDWNGQTFMAIGMKDKLLG-PDVMYPMKALINGCPEPLEIADAGHFVQE-FGEQVAREA 302 (310)
T ss_dssp C-CHHHHHHHHHHHHHHHHTCCSEEEEEEETTCSSSS-HHHHHHHHHHSTTCCCCEEETTCCSCGGG-GHHHHHHHH
T ss_pred c-ccchhhhhhhHhhhhhccccCceEEEeccCcchhh-hHHHHHHHhcccccceeeecCCcccchhh-ChHHHHHHH
Confidence 0 000 0112345567 899999999999999999 888999999999998877 999999999 999999876
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-32 Score=260.54 Aligned_cols=248 Identities=17% Similarity=0.187 Sum_probs=161.7
Q ss_pred ecCCeEEEEeec--CCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhh
Q 013006 141 WKPKFNVHYEKA--GCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEK 218 (451)
Q Consensus 141 ~~~g~~l~y~~~--g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~ 218 (451)
..+|.+|+|... |. .+|+|||+||++.+...|..+++.|+++|+||++|+||||.|+.+...
T Consensus 10 ~~~g~~l~y~~~~~G~---~~p~vvllHG~~~~~~~w~~~~~~L~~~~rvia~DlrGhG~S~~~~~~------------- 73 (276)
T 2wj6_A 10 LVFDNKLSYIDNQRDT---DGPAILLLPGWCHDHRVYKYLIQELDADFRVIVPNWRGHGLSPSEVPD------------- 73 (276)
T ss_dssp EETTEEEEEEECCCCC---SSCEEEEECCTTCCGGGGHHHHHHHTTTSCEEEECCTTCSSSCCCCCC-------------
T ss_pred eeCCeEEEEEEecCCC---CCCeEEEECCCCCcHHHHHHHHHHHhcCCEEEEeCCCCCCCCCCCCCC-------------
Confidence 357999999999 73 358999999999999999999999998999999999999999754321
Q ss_pred hccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhC-CCccceEEEeccCCCCCCCC
Q 013006 219 NFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACN-PHLVKGVTLLNATPFWGFSP 297 (451)
Q Consensus 219 ~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~-P~~v~~lvl~~~~~~~~~~~ 297 (451)
|+++++++|+.++++++++++++||||||||.+++.+|.++ |++|+++|++++.+.. +
T Consensus 74 ------------------~~~~~~a~dl~~ll~~l~~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~~~~---~ 132 (276)
T 2wj6_A 74 ------------------FGYQEQVKDALEILDQLGVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWA---P 132 (276)
T ss_dssp ------------------CCHHHHHHHHHHHHHHHTCCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCCCSS---C
T ss_pred ------------------CCHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHHhCHHhhceEEEecccccC---C
Confidence 89999999999999999999999999999999999999999 9999999999974210 0
Q ss_pred CCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChh---HHHHHH
Q 013006 298 NPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPA---AAASFA 374 (451)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 374 (451)
............. +..... .....+..+.... ........+........ ......
T Consensus 133 ----~~~~~~~~~~~~~---~~~~~~-------------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (276)
T 2wj6_A 133 ----KPDFAKSLTLLKD---PERWRE-------------GTHGLFDVWLDGH--DEKRVRHHLLEEMADYGYDCWGRSGR 190 (276)
T ss_dssp ----CHHHHHHHHHHHC---TTTHHH-------------HHHHHHHHHHTTB--CCHHHHHHHHTTTTTCCHHHHHHHHH
T ss_pred ----CchHHHHhhhccC---cchHHH-------------HHHHHHHHhhccc--chHHHHHHHHHHhhhcchhhhhhccc
Confidence 0110000000000 000000 0011111111110 00111111111110000 000000
Q ss_pred HHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCC--hHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 375 SIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVK--PVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~--~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
...... .........+..+++|+++++|..|...+ ....+.+++.+|++++++++++||++++|+|++|++.|
T Consensus 191 ~~~~~~---~~~~~~~~~l~~i~~P~lv~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~i~~~gH~~~~e~P~~~~~~i 265 (276)
T 2wj6_A 191 VIEDAY---GRNGSPMQMMANLTKTRPIRHIFSQPTEPEYEKINSDFAEQHPWFSYAKLGGPTHFPAIDVPDRAAVHI 265 (276)
T ss_dssp HHHHHH---HHHCCHHHHHHTCSSCCCEEEEECCSCSHHHHHHHHHHHHHCTTEEEEECCCSSSCHHHHSHHHHHHHH
T ss_pred hhHHHH---hhccchhhHHhhcCCCceEEEEecCccchhHHHHHHHHHhhCCCeEEEEeCCCCCcccccCHHHHHHHH
Confidence 000000 00001123466789999998874443332 34557788899999999999999999999999999876
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-32 Score=263.05 Aligned_cols=248 Identities=18% Similarity=0.204 Sum_probs=164.8
Q ss_pred eEEEEeecCCCCCC-CCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccc
Q 013006 145 FNVHYEKAGCENVN-SPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLW 222 (451)
Q Consensus 145 ~~l~y~~~g~~~~~-~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w 222 (451)
.+++|...|+. + +|+|||+||+++++..|+.+++.|++ +|+||++|+||||.|+.+....
T Consensus 33 ~~l~y~~~G~~--~~g~~vvllHG~~~~~~~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~~~~---------------- 94 (297)
T 2xt0_A 33 LRMHYVDEGPR--DAEHTFLCLHGEPSWSFLYRKMLPVFTAAGGRVVAPDLFGFGRSDKPTDDA---------------- 94 (297)
T ss_dssp CCEEEEEESCT--TCSCEEEEECCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCEESCGG----------------
T ss_pred eEEEEEEccCC--CCCCeEEEECCCCCcceeHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCcc----------------
Confidence 99999999963 3 68999999999999999999999976 5999999999999997543211
Q ss_pred cCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCc
Q 013006 223 GFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRS 302 (451)
Q Consensus 223 ~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~ 302 (451)
.|+++++++|+.++++++++++++||||||||.+|+.+|.++|++|+++|++++.. .. .....
T Consensus 95 -------------~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~--~~--~~~~~ 157 (297)
T 2xt0_A 95 -------------VYTFGFHRRSLLAFLDALQLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTAL--AV--GLSPG 157 (297)
T ss_dssp -------------GCCHHHHHHHHHHHHHHHTCCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCC--CS--SSCSC
T ss_pred -------------cCCHHHHHHHHHHHHHHhCCCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCCC--Cc--ccCCc
Confidence 28999999999999999999999999999999999999999999999999999842 11 00000
Q ss_pred hHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCC-
Q 013006 303 PKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQ- 381 (451)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 381 (451)
... ....... .... .......+.... ....+.....+...............+.....
T Consensus 158 ~~~----------------~~~~~~~-~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (297)
T 2xt0_A 158 KGF----------------ESWRDFV-ANSP-DLDVGKLMQRAI---PGITDAEVAAYDAPFPGPEFKAGVRRFPAIVPI 216 (297)
T ss_dssp HHH----------------HHHHHHH-HTCT-TCCHHHHHHHHS---TTCCHHHHHHHHTTCSSGGGCHHHHHGGGGSCC
T ss_pred hhH----------------HHHHHHh-hccc-ccchhHHHhccC---ccCCHHHHHHHhccccCcchhHHHHHHHHhCcc
Confidence 000 0000000 0000 000000000000 00011111111111111111111111110000
Q ss_pred --CCC---chhHHhhhcc-CCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEE--eCCCCCCccccChHHHHhhh
Q 013006 382 --GNL---SFREALSRCQ-MNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYE--ISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 382 --~~~---~~~~~~~~l~-~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~--i~~~gH~~~~e~p~~v~~~I 450 (451)
... ...+....+. ++++|+|+|+|++|.+++ ...+++++.+|++++.+ ++++||++++ +|++|++.|
T Consensus 217 ~~~~~~~~~~~~~~~~l~~~i~~P~Lvi~G~~D~~~~-~~~~~~~~~~p~~~~~~~~~~~~GH~~~~-~p~~~~~~i 291 (297)
T 2xt0_A 217 TPDMEGAEIGRQAMSFWSTQWSGPTFMAVGAQDPVLG-PEVMGMLRQAIRGCPEPMIVEAGGHFVQE-HGEPIARAA 291 (297)
T ss_dssp STTSTTHHHHHHHHHHHHHTCCSCEEEEEETTCSSSS-HHHHHHHHHHSTTCCCCEEETTCCSSGGG-GCHHHHHHH
T ss_pred ccccchhhHHHHHHHHhhhccCCCeEEEEeCCCcccC-hHHHHHHHhCCCCeeEEeccCCCCcCccc-CHHHHHHHH
Confidence 000 0123344567 899999999999999999 88899999999987654 7899999999 999999876
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-32 Score=255.71 Aligned_cols=261 Identities=18% Similarity=0.149 Sum_probs=170.5
Q ss_pred eeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchh
Q 013006 138 FWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTE 216 (451)
Q Consensus 138 ~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~ 216 (451)
+++..+|.+|+|..+|+. ++++|||+||++.+...|..+++.|++ +|+|+++|+||||.|..+..
T Consensus 2 ~~~~~~g~~l~y~~~g~~--~~~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~------------ 67 (275)
T 1a88_A 2 TVTTSDGTNIFYKDWGPR--DGLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPST------------ 67 (275)
T ss_dssp EEECTTSCEEEEEEESCT--TSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS------------
T ss_pred eEEccCCCEEEEEEcCCC--CCceEEEECCCCCchhhHHHHHHHHHHCCceEEEEcCCcCCCCCCCCC------------
Confidence 456678999999999863 568999999999999999999999965 69999999999999975422
Q ss_pred hhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhC-CCccceEEEeccCCCCCC
Q 013006 217 EKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACN-PHLVKGVTLLNATPFWGF 295 (451)
Q Consensus 217 ~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~-P~~v~~lvl~~~~~~~~~ 295 (451)
.++++++++|+.+++++++.++++|+||||||.+++.+|+++ |++|+++|++++.+....
T Consensus 68 -------------------~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~ 128 (275)
T 1a88_A 68 -------------------GHDMDTYAADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMV 128 (275)
T ss_dssp -------------------CCSHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCB
T ss_pred -------------------CCCHHHHHHHHHHHHHHcCCCceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccc
Confidence 179999999999999999999999999999999999988887 999999999998542110
Q ss_pred CCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHH-HHhhcC---CCChHHHHHHHHhhccChhHHH
Q 013006 296 SPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLK-QVYADH---ATNVDTVFTRILETTQHPAAAA 371 (451)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 371 (451)
... .+.... .......+...... ........... ..+... ....+.....+...........
T Consensus 129 ~~~-----------~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (275)
T 1a88_A 129 KSD-----------TNPDGL-PLEVFDEFRAALAA--NRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANA 194 (275)
T ss_dssp CBT-----------TBTTSB-CHHHHHHHHHHHHH--CHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHH
T ss_pred cCc-----------cCcccC-CHHHHHHHHHHHhh--hHHHHHHhhhccccccccCcccccCHHHHHHHHHHhhhcchHh
Confidence 000 000000 00111111111100 00001111111 011100 0011122222111110000000
Q ss_pred HHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChH-HHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 372 SFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPV-WGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~-~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
.+...... ...+....+.++++|+|+|+|++|.++|++ ..+.+.+.+|++++++++++||++++|+|+++++.|
T Consensus 195 ~~~~~~~~-----~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i 269 (275)
T 1a88_A 195 HYECIAAF-----SETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPHGMLSTHPEVLNPDL 269 (275)
T ss_dssp HHHHHHHH-----HHCCCHHHHHHCCSCEEEEEETTCSSSCSTTTHHHHHHHSTTEEEEEETTCCTTHHHHCHHHHHHHH
T ss_pred HHHHHhhh-----hhcccccccccCCCCEEEEecCCCccCCcHHHHHHHHhhCCCcEEEEcCCCCccHHHhCHHHHHHHH
Confidence 00000000 001122345678999999999999999987 556678889999999999999999999999999876
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-33 Score=259.54 Aligned_cols=249 Identities=17% Similarity=0.204 Sum_probs=167.2
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccc
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLW 222 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w 222 (451)
-+.+++|...|. +++|||+||++++...|..+++.|+++|+|+++|+||||.|..+...
T Consensus 4 ~~~~~~y~~~G~----g~~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~----------------- 62 (269)
T 2xmz_A 4 THYKFYEANVET----NQVLVFLHGFLSDSRTYHNHIEKFTDNYHVITIDLPGHGEDQSSMDE----------------- 62 (269)
T ss_dssp CSEEEECCSSCC----SEEEEEECCTTCCGGGGTTTHHHHHTTSEEEEECCTTSTTCCCCTTS-----------------
T ss_pred ccceEEEEEcCC----CCeEEEEcCCCCcHHHHHHHHHHHhhcCeEEEecCCCCCCCCCCCCC-----------------
Confidence 368999999884 56899999999999999999999988899999999999999764321
Q ss_pred cCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCc
Q 013006 223 GFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRS 302 (451)
Q Consensus 223 ~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~ 302 (451)
.++++++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++.+... . ..
T Consensus 63 -------------~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~--~---~~ 124 (269)
T 2xmz_A 63 -------------TWNFDYITTLLDRILDKYKDKSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIK--E---EA 124 (269)
T ss_dssp -------------CCCHHHHHHHHHHHHGGGTTSEEEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCSCCS--S---HH
T ss_pred -------------ccCHHHHHHHHHHHHHHcCCCcEEEEEECchHHHHHHHHHhCchheeeeEEEcCCcccC--C---ch
Confidence 17999999999999999999999999999999999999999999999999999754210 0 00
Q ss_pred hHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcC-CC----ChHHHHHHHHhhc--cChhHHHHHHH
Q 013006 303 PKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADH-AT----NVDTVFTRILETT--QHPAAAASFAS 375 (451)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~--~~~~~~~~~~~ 375 (451)
....... ........+. ......++..+.... .. ..+.....+.... ..+........
T Consensus 125 ~~~~~~~----------~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (269)
T 2xmz_A 125 NQLERRL----------VDDARAKVLD-----IAGIELFVNDWEKLPLFQSQLELPVEIQHQIRQQRLSQSPHKMAKALR 189 (269)
T ss_dssp HHHHHHH----------HHHHHHHHHH-----HHCHHHHHHHHTTSGGGGGGGGSCHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred hHHHHhh----------hhhHHHHhhc-----cccHHHHHHHHHhCccccccccCCHHHHHHHHHHHhccCcHHHHHHHH
Confidence 0000000 0000000000 001111122111110 00 0111111111111 11111111111
Q ss_pred HHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 376 IMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 376 ~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
.. ..... .+....+.++++|+|+|+|++|.++++...+ +++.+|++++++++++||++++|+|+++++.|
T Consensus 190 ~~-~~~~~---~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~-~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i 259 (269)
T 2xmz_A 190 DY-GTGQM---PNLWPRLKEIKVPTLILAGEYDEKFVQIAKK-MANLIPNSKCKLISATGHTIHVEDSDEFDTMI 259 (269)
T ss_dssp HH-STTTS---CCCGGGGGGCCSCEEEEEETTCHHHHHHHHH-HHHHSTTEEEEEETTCCSCHHHHSHHHHHHHH
T ss_pred HH-HhccC---ccHHHHHHhcCCCEEEEEeCCCcccCHHHHH-HHhhCCCcEEEEeCCCCCChhhcCHHHHHHHH
Confidence 11 00011 1223456778999999999999999888765 88999999999999999999999999999876
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-32 Score=255.17 Aligned_cols=259 Identities=16% Similarity=0.162 Sum_probs=169.0
Q ss_pred eeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchh
Q 013006 138 FWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTE 216 (451)
Q Consensus 138 ~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~ 216 (451)
+++..+|.+|+|..+| ++++|||+||++.+...|..+++.|++ +|+|+++|+||||.|..+...
T Consensus 2 ~~~~~~g~~l~y~~~g----~~~~vvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~----------- 66 (273)
T 1a8s_A 2 TFTTRDGTQIYYKDWG----SGQPIVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSG----------- 66 (273)
T ss_dssp EEECTTSCEEEEEEES----CSSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSC-----------
T ss_pred eEecCCCcEEEEEEcC----CCCEEEEECCCCCcHHHHhhHHhhHhhCCcEEEEECCCCCCCCCCCCCC-----------
Confidence 3566789999999998 468999999999999999999999965 699999999999999754221
Q ss_pred hhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhC-CCccceEEEeccCCCCCC
Q 013006 217 EKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACN-PHLVKGVTLLNATPFWGF 295 (451)
Q Consensus 217 ~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~-P~~v~~lvl~~~~~~~~~ 295 (451)
++++++++|+.+++++++.++++|+||||||.+++.+|+++ |++|+++|++++.+....
T Consensus 67 --------------------~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~ 126 (273)
T 1a8s_A 67 --------------------NDMDTYADDLAQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLML 126 (273)
T ss_dssp --------------------CSHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCB
T ss_pred --------------------CCHHHHHHHHHHHHHHhCCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccc
Confidence 79999999999999999999999999999999999988876 999999999997542111
Q ss_pred CCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHH-HHhhcC---CCChHHHHHHHHhhccChhHHH
Q 013006 296 SPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLK-QVYADH---ATNVDTVFTRILETTQHPAAAA 371 (451)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 371 (451)
.... +.... .......+....... .......... ..+... ....+.....+...........
T Consensus 127 ~~~~-----------~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (273)
T 1a8s_A 127 KTEA-----------NPGGL-PMEVFDGIRQASLAD--RSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKN 192 (273)
T ss_dssp CCSS-----------CTTSB-CHHHHHHHHHHHHHH--HHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHH
T ss_pred cCcc-----------ccccC-cHHHHHHHHHHhHhh--HHHHHHHhhcccccCcCCcccccCHHHHHHHHHhccccchhH
Confidence 0000 00000 001111111111000 0000111111 000100 0011122221111100000000
Q ss_pred HHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChH-HHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 372 SFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPV-WGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~-~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
.+..... ....+....+.++++|+|+|+|++|.++|++ ..+.+.+.+|++++++++++||++++|+|+++++.|
T Consensus 193 ~~~~~~~-----~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i 267 (273)
T 1a8s_A 193 AYDCIKA-----FSETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHGLTDTHKDQLNADL 267 (273)
T ss_dssp HHHHHHH-----HHHCCCHHHHHTCCSCEEEEEETTCSSSCSTTTHHHHHHHSTTCEEEEETTCCSCHHHHTHHHHHHHH
T ss_pred HHHHHHH-----HhccChhhhhhcCCCCEEEEECCCCccCChHHHHHHHHHhCCCcEEEEeCCCCCcchhhCHHHHHHHH
Confidence 0000000 0001123345678999999999999999988 556778889999999999999999999999999876
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-32 Score=257.85 Aligned_cols=259 Identities=18% Similarity=0.244 Sum_probs=174.1
Q ss_pred ceeeec-CC--eEEEEeecCCCCCCCC-cEEEecCCC---CChhcHHHHH-HhhcCCceEEEEcCCCCCCCCCCCCCCCC
Q 013006 137 CFWEWK-PK--FNVHYEKAGCENVNSP-PVLFLPGFG---VGSFHYEKQL-KDLGKDYRAWAIDFLGQGMSLPDEDPTPR 208 (451)
Q Consensus 137 ~~~~~~-~g--~~l~y~~~g~~~~~~p-~VlllHG~~---~~~~~~~~~~-~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~ 208 (451)
.+++.. +| .+++|...|. ++ +|||+||++ .+...|..++ +.|+++|+|+++|+||||.|..+...
T Consensus 14 ~~~~~~~~g~~~~l~y~~~g~----g~~~vvllHG~~~~~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~--- 86 (289)
T 1u2e_A 14 RFLNVEEAGKTLRIHFNDCGQ----GDETVVLLHGSGPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKSDSVVNS--- 86 (289)
T ss_dssp EEEEEEETTEEEEEEEEEECC----CSSEEEEECCCSTTCCHHHHTTTTHHHHHHTTCEEEEECCTTSTTSCCCCCS---
T ss_pred eEEEEcCCCcEEEEEEeccCC----CCceEEEECCCCcccchhHHHHHhhhHHHhcCCeEEEEcCCCCCCCCCCCcc---
Confidence 344443 28 9999999984 45 999999998 6777898888 88988899999999999999764321
Q ss_pred CCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEec
Q 013006 209 SKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLN 288 (451)
Q Consensus 209 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~ 288 (451)
.++++++++|+.+++++++.++++||||||||.+++.+|.++|++|+++|+++
T Consensus 87 ---------------------------~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~ 139 (289)
T 1u2e_A 87 ---------------------------GSRSDLNARILKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMG 139 (289)
T ss_dssp ---------------------------SCHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEES
T ss_pred ---------------------------ccCHHHHHHHHHHHHHHhCCCceEEEEECHhHHHHHHHHHHCHHhhhEEEEEC
Confidence 17999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHh-hccCh
Q 013006 289 ATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILE-TTQHP 367 (451)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 367 (451)
+........... + ......+..... ..........+...........+........ ....+
T Consensus 140 ~~~~~~~~~~~~---------------~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (289)
T 1u2e_A 140 GGTGGMSLFTPM---------------P-TEGIKRLNQLYR--QPTIENLKLMMDIFVFDTSDLTDALFEARLNNMLSRR 201 (289)
T ss_dssp CSCCCCCSSSCS---------------S-CHHHHHHHHHHH--SCCHHHHHHHHHTTSSCTTSCCHHHHHHHHHHHHHTH
T ss_pred CCcccccccccc---------------c-hhhHHHHHHHHh--cchHHHHHHHHHHhhcCcccCCHHHHHHHHHHhhcCh
Confidence 864210000000 0 011111111110 0111112222221111111111122211111 11112
Q ss_pred hHHHHHHHHHhc-CCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHH
Q 013006 368 AAAASFASIMFA-PQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVC 446 (451)
Q Consensus 368 ~~~~~~~~~~~~-~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v 446 (451)
.....+...+.. ..... +....+.++++|+|+|+|++|.++|++.++++++.+|++++++++++||++++|+|+++
T Consensus 202 ~~~~~~~~~~~~~~~~~~---~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~ 278 (289)
T 1u2e_A 202 DHLENFVKSLEANPKQFP---DFGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGIAGSELHIFRDCGHWAQWEHADAF 278 (289)
T ss_dssp HHHHHHHHHHHHCSCCSC---CCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHSTTCEEEEESSCCSCHHHHTHHHH
T ss_pred hHHHHHHHHHHhcccccc---chhhHHhhcCCCeEEEeeCCCCccCHHHHHHHHhhCCCcEEEEeCCCCCchhhcCHHHH
Confidence 222222211111 11111 22345677899999999999999999999999999999999999999999999999999
Q ss_pred Hhhh
Q 013006 447 SLCL 450 (451)
Q Consensus 447 ~~~I 450 (451)
++.|
T Consensus 279 ~~~i 282 (289)
T 1u2e_A 279 NQLV 282 (289)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9876
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-32 Score=253.60 Aligned_cols=265 Identities=11% Similarity=0.123 Sum_probs=179.4
Q ss_pred ecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhc
Q 013006 141 WKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNF 220 (451)
Q Consensus 141 ~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~ 220 (451)
..+|.+++|...| ++|+|||+||++++...|..+++.|+++|+|+++|+||||.|..+....
T Consensus 9 ~~~~~~~~y~~~g----~~~~vv~~HG~~~~~~~~~~~~~~L~~~~~vi~~d~~G~G~s~~~~~~~-------------- 70 (278)
T 3oos_A 9 KTPRGKFEYFLKG----EGPPLCVTHLYSEYNDNGNTFANPFTDHYSVYLVNLKGCGNSDSAKNDS-------------- 70 (278)
T ss_dssp EETTEEEEEEEEC----SSSEEEECCSSEECCTTCCTTTGGGGGTSEEEEECCTTSTTSCCCSSGG--------------
T ss_pred ecCCceEEEEecC----CCCeEEEEcCCCcchHHHHHHHHHhhcCceEEEEcCCCCCCCCCCCCcc--------------
Confidence 3468899999998 4689999999999999999999999889999999999999997653211
Q ss_pred cccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCC
Q 013006 221 LWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPI 300 (451)
Q Consensus 221 ~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~ 300 (451)
.++++++++|+.+++++++.++++++||||||.+++.+|.++|++|+++|++++..........
T Consensus 71 ---------------~~~~~~~~~~~~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~- 134 (278)
T 3oos_A 71 ---------------EYSMTETIKDLEAIREALYINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHK- 134 (278)
T ss_dssp ---------------GGSHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGST-
T ss_pred ---------------cCcHHHHHHHHHHHHHHhCCCeEEEEeecccHHHHHHHHHhCchhhCeEEEecCcccccccccc-
Confidence 2799999999999999999999999999999999999999999999999999987531110000
Q ss_pred CchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHH-HHHHHHHhc
Q 013006 301 RSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAA-ASFASIMFA 379 (451)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 379 (451)
...+................+................+... ....++.+..+.......... ..+..+...
T Consensus 135 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (278)
T 3oos_A 135 -------DSIYCSKNVKFNRIVSIMNALNDDSTVQEERKALSREWALM-SFYSEEKLEEALKLPNSGKTVGNRLNYFRQV 206 (278)
T ss_dssp -------TSTTSTTSTTHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHH-HCSCHHHHHHHTTSCCCCEECHHHHHHHHHT
T ss_pred -------chhhhhhchhHHHHHHHHHhhcccccCchHHHHHHHHHhhc-ccCCcHHHHHHhhccccchhHHHHHHHhhhc
Confidence 00000111111222222222211111111111111111111 111122233332222211111 112211111
Q ss_pred CCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 380 PQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 380 ~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
. ....+....+.++++|+|+|+|++|.+++++..+++++.+|++++++++++||++++|+|+++++.|
T Consensus 207 ~---~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i 274 (278)
T 3oos_A 207 E---YKDYDVRQKLKFVKIPSFIYCGKHDVQCPYIFSCEIANLIPNATLTKFEESNHNPFVEEIDKFNQFV 274 (278)
T ss_dssp T---GGGCBCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHSTTEEEEEETTCSSCHHHHSHHHHHHHH
T ss_pred c---cccccHHHHHhCCCCCEEEEEeccCCCCCHHHHHHHHhhCCCcEEEEcCCcCCCcccccHHHHHHHH
Confidence 1 1112334456788999999999999999999999999999999999999999999999999999876
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-32 Score=256.52 Aligned_cols=258 Identities=19% Similarity=0.282 Sum_probs=168.3
Q ss_pred ccceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCc
Q 013006 135 TSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDS 214 (451)
Q Consensus 135 ~~~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~ 214 (451)
...++...+|.+|+|...|+++ .+++|||+||++++...|..+++.|+++|+|+++|+||||.|+......
T Consensus 6 ~~~~~~~~~g~~l~~~~~g~~~-~~~~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~-------- 76 (285)
T 3bwx_A 6 EDRYWTSSDGLRLHFRAYEGDI-SRPPVLCLPGLTRNARDFEDLATRLAGDWRVLCPEMRGRGDSDYAKDPM-------- 76 (285)
T ss_dssp EEEEEECTTSCEEEEEEECBCT-TSCCEEEECCTTCCGGGGHHHHHHHBBTBCEEEECCTTBTTSCCCSSGG--------
T ss_pred ccCeeecCCCceEEEEEcCCCC-CCCcEEEECCCCcchhhHHHHHHHhhcCCEEEeecCCCCCCCCCCCCcc--------
Confidence 3456667899999999999643 2789999999999999999999999989999999999999997543111
Q ss_pred hhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCC
Q 013006 215 TEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWG 294 (451)
Q Consensus 215 ~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~ 294 (451)
.|+++++++|+.++++++++++++|+||||||.+|+.+|.++|++|+++|++++.+..
T Consensus 77 ---------------------~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~- 134 (285)
T 3bwx_A 77 ---------------------TYQPMQYLQDLEALLAQEGIERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPEV- 134 (285)
T ss_dssp ---------------------GCSHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSC-
T ss_pred ---------------------ccCHHHHHHHHHHHHHhcCCCceEEEEeCHHHHHHHHHHHhCchheeEEEEecCCccc-
Confidence 2799999999999999999999999999999999999999999999999999864321
Q ss_pred CCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCC-CChHHHHHHHHhh-ccCh-hH--
Q 013006 295 FSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHA-TNVDTVFTRILET-TQHP-AA-- 369 (451)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~-~~-- 369 (451)
..........+.............. ..+........ ......+...... .... ..
T Consensus 135 ------~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (285)
T 3bwx_A 135 ------SPEGLERIRGYVGQGRNFETWMHAA--------------RALQESSGDVYPDWDITQWLRYAKRIMVLGSSGRI 194 (285)
T ss_dssp ------CHHHHHHHHHHTTCCCEESSHHHHH--------------HHHHHHHTTTSTTCCHHHHHHHHHHHEEECTTSCE
T ss_pred ------CcchhHHHHHHhcCCcccccHHHHH--------------HHHHHhhhhcccccChHHHHHHHHhhheeCCCCce
Confidence 0111111100000000000000000 01111110000 0001111111100 0000 00
Q ss_pred ----HHHHHHHHhcC---CCCCchhHHhhhccCC-CCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCcccc
Q 013006 370 ----AASFASIMFAP---QGNLSFREALSRCQMN-GVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDE 441 (451)
Q Consensus 370 ----~~~~~~~~~~~---~~~~~~~~~~~~l~~i-~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e 441 (451)
...+...+... ....+..... .++ ++|+|+|+|++|.+++++..+++++. |++++++++++||++++|
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~P~lii~G~~D~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e 270 (285)
T 3bwx_A 195 AFDYDMKIAEPFEAPVGATPQVDMWPLF---DALATRPLLVLRGETSDILSAQTAAKMASR-PGVELVTLPRIGHAPTLD 270 (285)
T ss_dssp EESBCGGGGCCTTSCTTCCCSSCCHHHH---HHHTTSCEEEEEETTCSSSCHHHHHHHHTS-TTEEEEEETTCCSCCCSC
T ss_pred eeccCHHHHHHHhhhhhccccchhhHHH---HHccCCCeEEEEeCCCCccCHHHHHHHHhC-CCcEEEEeCCCCccchhh
Confidence 00000000000 0001111122 233 79999999999999999999999999 999999999999999999
Q ss_pred ChHHHH
Q 013006 442 VPEVCS 447 (451)
Q Consensus 442 ~p~~v~ 447 (451)
+|+.++
T Consensus 271 ~p~~~~ 276 (285)
T 3bwx_A 271 EPESIA 276 (285)
T ss_dssp SHHHHH
T ss_pred CchHHH
Confidence 999875
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-32 Score=260.14 Aligned_cols=272 Identities=14% Similarity=0.099 Sum_probs=180.0
Q ss_pred eeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhh
Q 013006 138 FWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEE 217 (451)
Q Consensus 138 ~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~ 217 (451)
.+...+|.+++|...| ++|+|||+||++++...|..++..|++.|+|+++|+||||.|..+..
T Consensus 13 ~~~~~~g~~l~~~~~g----~~~~vv~lHG~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~------------- 75 (301)
T 3kda_A 13 AYREVDGVKLHYVKGG----QGPLVMLVHGFGQTWYEWHQLMPELAKRFTVIAPDLPGLGQSEPPKT------------- 75 (301)
T ss_dssp EEEEETTEEEEEEEEE----SSSEEEEECCTTCCGGGGTTTHHHHTTTSEEEEECCTTSTTCCCCSS-------------
T ss_pred EEEeeCCeEEEEEEcC----CCCEEEEECCCCcchhHHHHHHHHHHhcCeEEEEcCCCCCCCCCCCC-------------
Confidence 3444589999999999 46899999999999999999999998889999999999999976522
Q ss_pred hhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCC-EEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCC
Q 013006 218 KNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREP-VYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFS 296 (451)
Q Consensus 218 ~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~-v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~ 296 (451)
.++++++++|+.+++++++.++ ++|+||||||.+++.+|.++|++|+++|++++.......
T Consensus 76 ------------------~~~~~~~~~~l~~~l~~l~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 137 (301)
T 3kda_A 76 ------------------GYSGEQVAVYLHKLARQFSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARI 137 (301)
T ss_dssp ------------------CSSHHHHHHHHHHHHHHHCSSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCCSSGGG
T ss_pred ------------------CccHHHHHHHHHHHHHHcCCCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCCCCCCc
Confidence 1799999999999999999988 999999999999999999999999999999986421100
Q ss_pred CCCCCchHHhhhcCCCCC-CCC-hHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHH
Q 013006 297 PNPIRSPKLARILPWSGT-FPL-PASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFA 374 (451)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (451)
..............|... ... +... ..+.. ......+..++...........+.....+......+.......
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (301)
T 3kda_A 138 YRFPAFTAQGESLVWHFSFFAADDRLA----ETLIA-GKERFFLEHFIKSHASNTEVFSERLLDLYARSYAKPHSLNASF 212 (301)
T ss_dssp GGSBSEETTEECSSTHHHHHHCSTTHH----HHHHT-TCHHHHHHHHHHHTCSSGGGSCHHHHHHHHHHHTSHHHHHHHH
T ss_pred cchhhhcchhhhhhhhHHHhhcCcchH----HHHhc-cchHHHHHHHHHhccCCcccCCHHHHHHHHHHhccccccchHH
Confidence 000000000000000000 000 0001 11100 0011112223333222222223344444444444433322222
Q ss_pred HHHhcCCC-CCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhhC
Q 013006 375 SIMFAPQG-NLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCLL 451 (451)
Q Consensus 375 ~~~~~~~~-~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~Il 451 (451)
..+..... ..........+.++++|+|+|+|++| +++...+.+.+.+|++++++++++||++++|+|+++++.|+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D--~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 288 (301)
T 3kda_A 213 EYYRALNESVRQNAELAKTRLQMPTMTLAGGGAGG--MGTFQLEQMKAYAEDVEGHVLPGCGHWLPEECAAPMNRLVI 288 (301)
T ss_dssp HHHHTHHHHHHHHHHHTTSCBCSCEEEEEECSTTS--CTTHHHHHHHTTBSSEEEEEETTCCSCHHHHTHHHHHHHHH
T ss_pred HHHHhhccchhhcccchhhccccCcceEEEecCCC--CChhHHHHHHhhcccCeEEEcCCCCcCchhhCHHHHHHHHH
Confidence 22211100 00111223334589999999999999 78888899999999999999999999999999999998873
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-31 Score=248.35 Aligned_cols=236 Identities=17% Similarity=0.195 Sum_probs=163.2
Q ss_pred cCCeEEEEeecCCCCCCCCcEEEecCCCCC-hhcHHHHHHhhcCC-ceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhh
Q 013006 142 KPKFNVHYEKAGCENVNSPPVLFLPGFGVG-SFHYEKQLKDLGKD-YRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKN 219 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~~~~p~VlllHG~~~~-~~~~~~~~~~L~~~-~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~ 219 (451)
.+|.+++|...|+ ..++|||+||++++ ...|..+++.|.+. |+|+++|+||||.|..+...
T Consensus 9 ~~g~~l~~~~~g~---~~~~vvllHG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~-------------- 71 (254)
T 2ocg_A 9 VNGVQLHYQQTGE---GDHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPDRD-------------- 71 (254)
T ss_dssp ETTEEEEEEEEEC---CSEEEEEECCTTCCHHHHCHHHHHHSCTTTEEEEEECCTTSTTCCSSCCC--------------
T ss_pred ECCEEEEEEEecC---CCCeEEEECCCCCCCccchHHHHHHHhhCCCeEEEECCCCCCCCCCCCCC--------------
Confidence 4799999999985 23589999999888 67899999999764 99999999999999754321
Q ss_pred ccccCCCCCCccccccccC---HHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCC
Q 013006 220 FLWGFGDKAQPWASELAYS---VDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFS 296 (451)
Q Consensus 220 ~~w~~~~~~~~~~~~~~~s---~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~ 296 (451)
++ +++.++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++.+...
T Consensus 72 -----------------~~~~~~~~~~~~~~~~l~~l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~-- 132 (254)
T 2ocg_A 72 -----------------FPADFFERDAKDAVDLMKALKFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVT-- 132 (254)
T ss_dssp -----------------CCTTHHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCC--
T ss_pred -----------------CChHHHHHHHHHHHHHHHHhCCCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccC--
Confidence 44 77889999999999999999999999999999999999999999999999854210
Q ss_pred CCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHH
Q 013006 297 PNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASI 376 (451)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (451)
................... ....+...+... ........+. ..+...
T Consensus 133 -----~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~--~~~~~~~~~~---------~~~~~~ 179 (254)
T 2ocg_A 133 -----DEDSMIYEGIRDVSKWSER-----------------TRKPLEALYGYD--YFARTCEKWV---------DGIRQF 179 (254)
T ss_dssp -----HHHHHHHHTTSCGGGSCHH-----------------HHHHHHHHHCHH--HHHHHHHHHH---------HHHHGG
T ss_pred -----hhhHHHHHHHHHHHHHHHH-----------------hHHHHHHHhcch--hhHHHHHHHH---------HHHHHH
Confidence 0000000000000000000 000000000000 0000000000 000000
Q ss_pred HhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 377 MFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 377 ~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
... .........+.++++|+|+|+|++|.++|++..+.+++.+|++++++++++||++++|+|+++++.|
T Consensus 180 ~~~----~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i 249 (254)
T 2ocg_A 180 KHL----PDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHVKGSRLHLMPEGKHNLHLRFADEFNKLA 249 (254)
T ss_dssp GGS----GGGBSSGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHH
T ss_pred Hhc----cCCchhhhhhhcccCCEEEEecCCCccCCHHHHHHHHHhCCCCEEEEcCCCCCchhhhCHHHHHHHH
Confidence 000 0001123456789999999999999999999999999999999999999999999999999999876
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-32 Score=253.85 Aligned_cols=251 Identities=19% Similarity=0.205 Sum_probs=168.6
Q ss_pred cCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhc
Q 013006 142 KPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNF 220 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~ 220 (451)
.+|.+|+|...| ++++|||+||++.+...|..+++.|++ +|+|+++|+||||.|..+...
T Consensus 10 ~~g~~l~y~~~g----~~~pvvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~--------------- 70 (279)
T 1hkh_A 10 STPIELYYEDQG----SGQPVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFGGSSKVNTG--------------- 70 (279)
T ss_dssp TEEEEEEEEEES----SSEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCCCSSC---------------
T ss_pred CCCeEEEEEecC----CCCcEEEEcCCCchhhHHhhhHHHHHhCCcEEEEeCCCCCCCCCCCCCC---------------
Confidence 468999999998 356899999999999999999999966 699999999999999754321
Q ss_pred cccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCC-ccceEEEeccCCCCCCCCCC
Q 013006 221 LWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPH-LVKGVTLLNATPFWGFSPNP 299 (451)
Q Consensus 221 ~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~-~v~~lvl~~~~~~~~~~~~~ 299 (451)
++++++++|+.+++++++.++++|+||||||.+++.+|.++|+ +|+++|++++.+.......
T Consensus 71 ----------------~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~- 133 (279)
T 1hkh_A 71 ----------------YDYDTFAADLHTVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRD- 133 (279)
T ss_dssp ----------------CSHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBT-
T ss_pred ----------------CCHHHHHHHHHHHHHhcCCCceEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCc-
Confidence 7999999999999999999999999999999999999999999 9999999998532110000
Q ss_pred CCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhc----CCCChHHHHHHHHhhccChh---HHHH
Q 013006 300 IRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYAD----HATNVDTVFTRILETTQHPA---AAAS 372 (451)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~---~~~~ 372 (451)
. ..... .......+...... .............+.. .....+.....+........ ....
T Consensus 134 -~---------~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (279)
T 1hkh_A 134 -D---------NPEGV-PQEVFDGIEAAAKG--DRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAV 200 (279)
T ss_dssp -T---------BTTSB-CHHHHHHHHHHHHH--CHHHHHHHHHHHHHTHHHHBTTTBCHHHHHHHHHHHHTSCTTHHHHT
T ss_pred -C---------CcCCC-cHHHHHHHHHHhhh--hhhhhHHHHHhhhhhcccCCcccccHHHHHhhhhhhccCcHHHHHHH
Confidence 0 00000 00111111111100 0001111111111111 11111222222111111110 1111
Q ss_pred HHHHHhcCCCCCchhHHhhhccCC---CCCEEEEeeCCCCCCChHHH-HHHHHHCCCCcEEEeCCCCCCccccChHHHHh
Q 013006 373 FASIMFAPQGNLSFREALSRCQMN---GVPICLIYGKEDPWVKPVWG-LQVKRQVPEAPYYEISPAGHCPHDEVPEVCSL 448 (451)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~l~~i---~~PvLii~G~~D~~v~~~~~-~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~ 448 (451)
+... ..+.. ..+.++ ++|+|+|+|++|.++|++.. +.+.+.+|++++++++++||++++|+|+++++
T Consensus 201 ~~~~------~~~~~---~~l~~i~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~ 271 (279)
T 1hkh_A 201 VPAW------IEDFR---SDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAVPEADYVEVEGAPHGLLWTHADEVNA 271 (279)
T ss_dssp HHHH------TCBCH---HHHHHHHHHCCCEEEEEETTCSSSCTTTTHHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHH
T ss_pred HHHH------hhchh---hhHHHhccCCCCEEEEEcCCCccCChHHHHHHHHHhCCCeeEEEeCCCCccchhcCHHHHHH
Confidence 1111 01112 233456 99999999999999999877 88999999999999999999999999999998
Q ss_pred hh
Q 013006 449 CL 450 (451)
Q Consensus 449 ~I 450 (451)
.|
T Consensus 272 ~i 273 (279)
T 1hkh_A 272 AL 273 (279)
T ss_dssp HH
T ss_pred HH
Confidence 76
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-31 Score=253.82 Aligned_cols=270 Identities=18% Similarity=0.198 Sum_probs=184.1
Q ss_pred CccceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013006 134 ITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGD 213 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~ 213 (451)
++..+++ .+|.+++|...|++ ++|+|||+||++++...|..++..|+++|+|+++|+||||.|......
T Consensus 10 ~~~~~~~-~~g~~l~~~~~g~~--~~~~vl~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~-------- 78 (299)
T 3g9x_A 10 FDPHYVE-VLGERMHYVDVGPR--DGTPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPDLD-------- 78 (299)
T ss_dssp CCCEEEE-ETTEEEEEEEESCS--SSCCEEEECCTTCCGGGGTTTHHHHTTTSCEEEECCTTSTTSCCCCCC--------
T ss_pred cceeeee-eCCeEEEEEecCCC--CCCEEEEECCCCccHHHHHHHHHHHccCCEEEeeCCCCCCCCCCCCCc--------
Confidence 3444444 48999999999964 578999999999999999999999998999999999999999765431
Q ss_pred chhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCC
Q 013006 214 STEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFW 293 (451)
Q Consensus 214 ~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~ 293 (451)
++++++++|+.+++++++.++++|+||||||.+++.+|.++|++|+++|++++.+..
T Consensus 79 -----------------------~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 135 (299)
T 3g9x_A 79 -----------------------YFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPF 135 (299)
T ss_dssp -----------------------CCHHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCCB
T ss_pred -----------------------ccHHHHHHHHHHHHHHhCCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcch
Confidence 799999999999999999999999999999999999999999999999999965322
Q ss_pred CCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHH
Q 013006 294 GFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASF 373 (451)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (451)
..... .............. +.... ... ..........+..... ..........+......+......
T Consensus 136 ~~~~~--~~~~~~~~~~~~~~---~~~~~----~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 202 (299)
T 3g9x_A 136 PTWDE--WPEFARETFQAFRT---ADVGR----ELI--IDQNAFIEGALPKCVV--RPLTEVEMDHYREPFLKPVDREPL 202 (299)
T ss_dssp SSGGG--SCGGGHHHHHHHTS---SSHHH----HHH--TTSCHHHHTHHHHTCS--SCCCHHHHHHHHGGGSSGGGGHHH
T ss_pred hhhhh--cchHHHHHHHHHcC---CCcch----hhh--ccchhhHHHhhhhhhc--cCCCHHHHHHHHHHhccccccchh
Confidence 11000 00000000000000 00000 000 0011111222221111 111223333444444333333332
Q ss_pred HHHHhcCCCCCc-------hhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHH
Q 013006 374 ASIMFAPQGNLS-------FREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVC 446 (451)
Q Consensus 374 ~~~~~~~~~~~~-------~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v 446 (451)
............ ..+....+.++++|+|+|+|++|.+++++..+.+.+.+|++++++++++||++++|+|+++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~ 282 (299)
T 3g9x_A 203 WRFPNELPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAESLPNCKTVDIGPGLHYLQEDNPDLI 282 (299)
T ss_dssp HHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHSTTEEEEEEEEESSCHHHHCHHHH
T ss_pred hhhhhhhhhccccchhhhhhhhhhhhcccCCCCeEEEecCCCCCCCHHHHHHHHhhCCCCeEEEeCCCCCcchhcCHHHH
Confidence 222221110000 0133445678899999999999999999999999999999999999999999999999999
Q ss_pred Hhhh
Q 013006 447 SLCL 450 (451)
Q Consensus 447 ~~~I 450 (451)
++.|
T Consensus 283 ~~~i 286 (299)
T 3g9x_A 283 GSEI 286 (299)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9876
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.98 E-value=1e-31 Score=250.08 Aligned_cols=247 Identities=11% Similarity=0.071 Sum_probs=168.7
Q ss_pred cCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhcc
Q 013006 142 KPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFL 221 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~ 221 (451)
.+|.+++|...|++ ++|+|||+||++++...|..+++.|+++|+|+++|+||||.|..+..
T Consensus 6 ~~g~~l~~~~~g~~--~~~~vv~lHG~~~~~~~~~~~~~~L~~~~~v~~~D~~G~G~S~~~~~----------------- 66 (264)
T 3ibt_A 6 VNGTLMTYSESGDP--HAPTLFLLSGWCQDHRLFKNLAPLLARDFHVICPDWRGHDAKQTDSG----------------- 66 (264)
T ss_dssp ETTEECCEEEESCS--SSCEEEEECCTTCCGGGGTTHHHHHTTTSEEEEECCTTCSTTCCCCS-----------------
T ss_pred eCCeEEEEEEeCCC--CCCeEEEEcCCCCcHhHHHHHHHHHHhcCcEEEEccccCCCCCCCcc-----------------
Confidence 37899999999963 57899999999999999999999998889999999999999986522
Q ss_pred ccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhC-CCccceEEEeccCCCCCCCCCCC
Q 013006 222 WGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACN-PHLVKGVTLLNATPFWGFSPNPI 300 (451)
Q Consensus 222 w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~-P~~v~~lvl~~~~~~~~~~~~~~ 300 (451)
.++++++++|+.+++++++.++++|+||||||.+++.+|.++ |++|+++|++++.+ .+
T Consensus 67 --------------~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~----~~--- 125 (264)
T 3ibt_A 67 --------------DFDSQTLAQDLLAFIDAKGIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLL----QP--- 125 (264)
T ss_dssp --------------CCCHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCS----SC---
T ss_pred --------------ccCHHHHHHHHHHHHHhcCCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCC----Cc---
Confidence 179999999999999999999999999999999999999999 99999999999864 11
Q ss_pred CchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChh---HHHHHHHHH
Q 013006 301 RSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPA---AAASFASIM 377 (451)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 377 (451)
.......+............. ...+..++... ........+........ .........
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (264)
T 3ibt_A 126 HPGFWQQLAEGQHPTEYVAGR-----------------QSFFDEWAETT--DNADVLNHLRNEMPWFHGEMWQRACREIE 186 (264)
T ss_dssp CHHHHHHHHHTTCTTTHHHHH-----------------HHHHHHHHTTC--CCHHHHHHHHHTGGGSCHHHHHHHHHHHH
T ss_pred ChhhcchhhcccChhhHHHHH-----------------HHHHHHhcccC--CcHHHHHHHHHhhhhccchhHHHHHHHhc
Confidence 011111111110000001111 11111222111 11111111111111110 000000000
Q ss_pred hcCCCCCchhHHhhhccCCCCCEEEEee--CCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 378 FAPQGNLSFREALSRCQMNGVPICLIYG--KEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 378 ~~~~~~~~~~~~~~~l~~i~~PvLii~G--~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
.. .....+....+.++++|+++|+| +.|...+++..+.+.+.+|++++++++++||++++|+|+++++.|
T Consensus 187 ~~---~~~~~~~~~~l~~i~~P~lii~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i 258 (264)
T 3ibt_A 187 AN---YRTWGSPLDRMDSLPQKPEICHIYSQPLSQDYRQLQLEFAAGHSWFHPRHIPGRTHFPSLENPVAVAQAI 258 (264)
T ss_dssp HH---HHHHSSHHHHHHTCSSCCEEEEEECCSCCHHHHHHHHHHHHHCTTEEEEECCCSSSCHHHHCHHHHHHHH
T ss_pred cc---hhhccchhhcccccCCCeEEEEecCCccchhhHHHHHHHHHhCCCceEEEcCCCCCcchhhCHHHHHHHH
Confidence 00 00001223566789999999976 444445577788999999999999999999999999999999876
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.2e-30 Score=248.66 Aligned_cols=264 Identities=14% Similarity=0.119 Sum_probs=166.6
Q ss_pred cCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHH-HhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhh
Q 013006 142 KPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQL-KDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKN 219 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~-~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~ 219 (451)
.+|.+|+|...|++ ++|+|||+||++++...|..++ +.|++ ||+|+++|+||||.|+......
T Consensus 8 ~~g~~l~y~~~G~~--~~~~vvllHG~~~~~~~w~~~~~~~L~~~G~~vi~~D~rG~G~S~~~~~~~------------- 72 (298)
T 1q0r_A 8 SGDVELWSDDFGDP--ADPALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAA------------- 72 (298)
T ss_dssp ETTEEEEEEEESCT--TSCEEEEECCTTCCGGGSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTTT-------------
T ss_pred cCCeEEEEEeccCC--CCCeEEEEcCCCCCccchHHHHHHHHHhCCCEEEeeCCCCCCCCCCCCCCc-------------
Confidence 68999999999953 5789999999999999998754 88976 5999999999999997521100
Q ss_pred ccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCC
Q 013006 220 FLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNP 299 (451)
Q Consensus 220 ~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~ 299 (451)
..|+++++++|+.++++++++++++|+||||||.+++.+|.++|++|+++|++++.+.. .
T Consensus 73 ---------------~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~-~---- 132 (298)
T 1q0r_A 73 ---------------HPYGFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLD-I---- 132 (298)
T ss_dssp ---------------SCCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTT-C----
T ss_pred ---------------CCcCHHHHHHHHHHHHHHhCCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccCCC-c----
Confidence 02799999999999999999999999999999999999999999999999999986410 0
Q ss_pred CCchHH---hhhcCCC-CCC--CChHHHHHHHHHHHHhcCChHHH-HHHHH--HHhhc-CCCChHHHHHHHHhhccChh-
Q 013006 300 IRSPKL---ARILPWS-GTF--PLPASVRKLIEFIWQKISDPESI-AEVLK--QVYAD-HATNVDTVFTRILETTQHPA- 368 (451)
Q Consensus 300 ~~~~~~---~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~- 368 (451)
..... .....|. ... .....+..+..... ........ ..... ..+.. .....+..............
T Consensus 133 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (298)
T 1q0r_A 133 -DFDANIERVMRGEPTLDGLPGPQQPFLDALALMNQ-PAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAG 210 (298)
T ss_dssp -CHHHHHHHHHHTCCCSSCSCCCCHHHHHHHHHHHS-CCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTT
T ss_pred -ccccchhhhhhhhhhhcccccccHHHHHHHhccCc-ccccHHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHHhhccC
Confidence 00000 0000111 011 11111111111000 00111111 11111 01111 11111111111111000000
Q ss_pred HHHHH-HHHHhcCCCCCchhHHhhh-ccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHH
Q 013006 369 AAASF-ASIMFAPQGNLSFREALSR-CQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVC 446 (451)
Q Consensus 369 ~~~~~-~~~~~~~~~~~~~~~~~~~-l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v 446 (451)
....+ ...+. .. ...+.... ++++++|+|+|+|++|.++|++..+.+++.+|++++++++++|| |.|+++
T Consensus 211 ~~~~~~~~~~~-~~---~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH----e~p~~~ 282 (298)
T 1q0r_A 211 GVLAEPYAHYS-LT---LPPPSRAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLIPTARLAEIPGMGH----ALPSSV 282 (298)
T ss_dssp TCCSCCCGGGG-CC---CCCGGGGGGGGGCCSCEEEEEETTCSSSCTTHHHHHHHTSTTEEEEEETTCCS----SCCGGG
T ss_pred Cccchhhhhhh-hh---cCcccccccccccCCCEEEEEeCCCccCCHHHHHHHHHhCCCCEEEEcCCCCC----CCcHHH
Confidence 00000 00000 00 01133445 77899999999999999999999999999999999999999999 778888
Q ss_pred Hhhh
Q 013006 447 SLCL 450 (451)
Q Consensus 447 ~~~I 450 (451)
++.|
T Consensus 283 ~~~i 286 (298)
T 1q0r_A 283 HGPL 286 (298)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7765
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=3.8e-32 Score=255.48 Aligned_cols=249 Identities=18% Similarity=0.317 Sum_probs=164.5
Q ss_pred EEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCC
Q 013006 148 HYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDK 227 (451)
Q Consensus 148 ~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~ 227 (451)
+|...|+ .+|+|||+||++++...|..+++.|+++|+|+++|+||||.|+.+....
T Consensus 12 ~~~~~G~---g~~~vvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~--------------------- 67 (271)
T 1wom_A 12 HVKVKGS---GKASIMFAPGFGCDQSVWNAVAPAFEEDHRVILFDYVGSGHSDLRAYDL--------------------- 67 (271)
T ss_dssp TCEEEEC---CSSEEEEECCTTCCGGGGTTTGGGGTTTSEEEECCCSCCSSSCCTTCCT---------------------
T ss_pred eeEeecC---CCCcEEEEcCCCCchhhHHHHHHHHHhcCeEEEECCCCCCCCCCCcccc---------------------
Confidence 4455563 3479999999999999999999999889999999999999997542110
Q ss_pred CCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhh
Q 013006 228 AQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLAR 307 (451)
Q Consensus 228 ~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 307 (451)
...++++++++|+.++++++++++++||||||||.+++.+|.++|++|+++|++++.+.... .. .
T Consensus 68 ------~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~--~~---~---- 132 (271)
T 1wom_A 68 ------NRYQTLDGYAQDVLDVCEALDLKETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLN--DP---P---- 132 (271)
T ss_dssp ------TGGGSHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBE--ET---T----
T ss_pred ------cccccHHHHHHHHHHHHHHcCCCCeEEEEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCC--CC---c----
Confidence 01268999999999999999999999999999999999999999999999999998642100 00 0
Q ss_pred hcCCCCCCCChHHHHHHHHHHHHhcCChHHHH-HHHHHHhhcCCCChHHHHHHHHhhc--cChhHHHHHHHHHhcCCCCC
Q 013006 308 ILPWSGTFPLPASVRKLIEFIWQKISDPESIA-EVLKQVYADHATNVDTVFTRILETT--QHPAAAASFASIMFAPQGNL 384 (451)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 384 (451)
.+...+. ......+...+.. ...... ......+.. . ..+.....+.... ..+.....+......
T Consensus 133 --~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 199 (271)
T 1wom_A 133 --EYYGGFE-EEQLLGLLEMMEK---NYIGWATVFAATVLNQ-P-DRPEIKEELESRFCSTDPVIARQFAKAAFF----- 199 (271)
T ss_dssp --TEECSBC-HHHHHHHHHHHHH---CHHHHHHHHHHHHHCC-T-TCHHHHHHHHHHHHHSCHHHHHHHHHHHHS-----
T ss_pred --hhccCCC-HHHHHHHHHHHhh---hHHHHHHHHHHHHhcC-C-CchHHHHHHHHHHhcCCcHHHHHHHHHHhC-----
Confidence 0000110 1111111111100 000000 011111111 0 1111111111111 112111111111111
Q ss_pred chhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 385 SFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 385 ~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
.+....+.++++|+|+|+|++|.++|++..+.+++.+|++++++++++||++++|+|+++++.|
T Consensus 200 --~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i 263 (271)
T 1wom_A 200 --SDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHLPYSSLKQMEARGHCPHMSHPDETIQLI 263 (271)
T ss_dssp --CCCHHHHTTCCSCEEEEEEETCSSSCHHHHHHHHHHSSSEEEEEEEEESSCHHHHCHHHHHHHH
T ss_pred --cchHHhccccCCCEEEEEcCCCCcCCHHHHHHHHHHCCCCEEEEeCCCCcCccccCHHHHHHHH
Confidence 1123345779999999999999999999999999999999999999999999999999999876
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.2e-31 Score=245.28 Aligned_cols=249 Identities=15% Similarity=0.176 Sum_probs=170.7
Q ss_pred ceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchh
Q 013006 137 CFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTE 216 (451)
Q Consensus 137 ~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~ 216 (451)
.++...+|.+|+|...| ++|+|||+||++++...|..+++.|+++|+|+++|+||||.|.....
T Consensus 5 ~~~~~~~g~~l~~~~~g----~~~~vv~lHG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~------------ 68 (262)
T 3r0v_A 5 QTVPSSDGTPIAFERSG----SGPPVVLVGGALSTRAGGAPLAERLAPHFTVICYDRRGRGDSGDTPP------------ 68 (262)
T ss_dssp CEEECTTSCEEEEEEEE----CSSEEEEECCTTCCGGGGHHHHHHHTTTSEEEEECCTTSTTCCCCSS------------
T ss_pred heEEcCCCcEEEEEEcC----CCCcEEEECCCCcChHHHHHHHHHHhcCcEEEEEecCCCcCCCCCCC------------
Confidence 45667889999999998 36899999999999999999999999899999999999999975531
Q ss_pred hhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCC
Q 013006 217 EKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFS 296 (451)
Q Consensus 217 ~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~ 296 (451)
++++++++|+.+++++++ ++++++||||||.+++.+|.++| +|+++|++++.......
T Consensus 69 --------------------~~~~~~~~~~~~~~~~l~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~ 126 (262)
T 3r0v_A 69 --------------------YAVEREIEDLAAIIDAAG-GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDS 126 (262)
T ss_dssp --------------------CCHHHHHHHHHHHHHHTT-SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTT
T ss_pred --------------------CCHHHHHHHHHHHHHhcC-CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccc
Confidence 799999999999999999 99999999999999999999999 99999999986432111
Q ss_pred CCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhH---HHHH
Q 013006 297 PNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAA---AASF 373 (451)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 373 (451)
..... ......+...+.. ... ...+...+.......+.....+......... ...+
T Consensus 127 ~~~~~----------------~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (262)
T 3r0v_A 127 RPPVP----------------PDYQTRLDALLAE--GRR---GDAVTYFMTEGVGVPPDLVAQMQQAPMWPGMEAVAHTL 185 (262)
T ss_dssp SCCCC----------------TTHHHHHHHHHHT--TCH---HHHHHHHHHHTSCCCHHHHHHHHTSTTHHHHHHTGGGH
T ss_pred cchhh----------------hHHHHHHHHHhhc--cch---hhHHHHHhhcccCCCHHHHHHHHhhhcccchHHHHhhh
Confidence 10000 1111111111110 011 1111111111111112222222211100000 0000
Q ss_pred HHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 374 ASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
.......... ......+.++++|+|+|+|++|.+++++..+++++.+|++++++++++|| +++|+++++.|
T Consensus 186 ~~~~~~~~~~---~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH---~~~p~~~~~~i 256 (262)
T 3r0v_A 186 PYDHAVMGDN---TIPTARFASISIPTLVMDGGASPAWIRHTAQELADTIPNARYVTLENQTH---TVAPDAIAPVL 256 (262)
T ss_dssp HHHHHHHTTS---CCCHHHHTTCCSCEEEEECTTCCHHHHHHHHHHHHHSTTEEEEECCCSSS---SCCHHHHHHHH
T ss_pred hhhhhhhhcC---CCCHHHcCcCCCCEEEEeecCCCCCCHHHHHHHHHhCCCCeEEEecCCCc---ccCHHHHHHHH
Confidence 0000000000 12235567889999999999999999999999999999999999999999 47899998876
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-30 Score=246.89 Aligned_cols=266 Identities=14% Similarity=0.120 Sum_probs=181.7
Q ss_pred CccceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHh-hcCCceEEEEcCCCCCCCCCCCCCCCCCCCC
Q 013006 134 ITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKD-LGKDYRAWAIDFLGQGMSLPDEDPTPRSKEG 212 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~-L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~ 212 (451)
....+++ .+|.+|+|...|+ +|+|||+||++++...|..++.. +.++|+|+++|+||||.|..+...
T Consensus 9 ~~~~~~~-~~g~~l~~~~~g~----~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~S~~~~~~------- 76 (309)
T 3u1t_A 9 FAKRTVE-VEGATIAYVDEGS----GQPVLFLHGNPTSSYLWRNIIPYVVAAGYRAVAPDLIGMGDSAKPDIE------- 76 (309)
T ss_dssp CCCEEEE-ETTEEEEEEEEEC----SSEEEEECCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCCCSSC-------
T ss_pred ccceEEE-ECCeEEEEEEcCC----CCEEEEECCCcchhhhHHHHHHHHHhCCCEEEEEccCCCCCCCCCCcc-------
Confidence 3344444 4799999999984 68999999999999999999999 678999999999999999764331
Q ss_pred CchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCC
Q 013006 213 DSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPF 292 (451)
Q Consensus 213 ~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~ 292 (451)
++++++++|+.+++++++.++++|+||||||.+++.+|.++|++|+++|++++...
T Consensus 77 ------------------------~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 132 (309)
T 3u1t_A 77 ------------------------YRLQDHVAYMDGFIDALGLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVP 132 (309)
T ss_dssp ------------------------CCHHHHHHHHHHHHHHHTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCT
T ss_pred ------------------------cCHHHHHHHHHHHHHHcCCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCC
Confidence 79999999999999999999999999999999999999999999999999998642
Q ss_pred CCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHH------Hhc-CChHHHHHHHHHHhhcCCCChHHHHHHHHhhcc
Q 013006 293 WGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIW------QKI-SDPESIAEVLKQVYADHATNVDTVFTRILETTQ 365 (451)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (451)
...... .... ...........+. ... .........+... .............+.....
T Consensus 133 ~~~~~~-~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 197 (309)
T 3u1t_A 133 PALPMP-SYEA-------------MGPQLGPLFRDLRTADVGEKMVLDGNFFVETILPEM-GVVRSLSEAEMAAYRAPFP 197 (309)
T ss_dssp TTCSBS-CSGG-------------GHHHHHHHHHHHTSTTHHHHHHTTTCHHHHTHHHHT-SCSSCCCHHHHHHHHTTCC
T ss_pred Cccccc-cccc-------------cchhhhHHHHHHhccchhhhhccccceehhhhcccc-cccccCCHHHHHHHHHhcC
Confidence 110000 0000 0001111100000 000 0111111111111 0111222333444444443
Q ss_pred ChhHHHHHHHHHhcCCCCC-------chhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCc
Q 013006 366 HPAAAASFASIMFAPQGNL-------SFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCP 438 (451)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~ 438 (451)
.+................. ...+....+.++++|+|+|+|++|.++|++..+++.+.+++.++.+++++||++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 277 (309)
T 3u1t_A 198 TRQSRLPTLQWPREVPIGGEPAFAEAEVLKNGEWLMASPIPKLLFHAEPGALAPKPVVDYLSENVPNLEVRFVGAGTHFL 277 (309)
T ss_dssp STGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHSTTEEEEEEEEESSCH
T ss_pred CccccchHHHHHHHhccccccchhhhhhhhhhhhcccCCCCEEEEecCCCCCCCHHHHHHHHhhCCCCEEEEecCCcccc
Confidence 3333333222222111000 011333456778999999999999999999999999999999999999999999
Q ss_pred cccChHHHHhhh
Q 013006 439 HDEVPEVCSLCL 450 (451)
Q Consensus 439 ~~e~p~~v~~~I 450 (451)
++++|+++++.|
T Consensus 278 ~~~~p~~~~~~i 289 (309)
T 3u1t_A 278 QEDHPHLIGQGI 289 (309)
T ss_dssp HHHCHHHHHHHH
T ss_pred hhhCHHHHHHHH
Confidence 999999999876
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=99.97 E-value=9.1e-31 Score=248.26 Aligned_cols=273 Identities=14% Similarity=0.128 Sum_probs=174.6
Q ss_pred eecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhh
Q 013006 140 EWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKN 219 (451)
Q Consensus 140 ~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~ 219 (451)
...+|.+|+|...| ++|+|||+||++++...|..++..|.++|+|+++|+||||.|..+.....
T Consensus 18 ~~~~g~~l~~~~~g----~~~~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~~------------ 81 (306)
T 3r40_A 18 INTSSGRIFARVGG----DGPPLLLLHGFPQTHVMWHRVAPKLAERFKVIVADLPGYGWSDMPESDEQ------------ 81 (306)
T ss_dssp ECCTTCCEEEEEEE----CSSEEEEECCTTCCGGGGGGTHHHHHTTSEEEEECCTTSTTSCCCCCCTT------------
T ss_pred EEeCCEEEEEEEcC----CCCeEEEECCCCCCHHHHHHHHHHhccCCeEEEeCCCCCCCCCCCCCCcc------------
Confidence 34589999999998 46899999999999999999999998899999999999999976543210
Q ss_pred ccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCC
Q 013006 220 FLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNP 299 (451)
Q Consensus 220 ~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~ 299 (451)
...++++++++|+.+++++++.++++|+||||||.+++.+|.++|++|+++|++++.+........
T Consensus 82 --------------~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 147 (306)
T 3r40_A 82 --------------HTPYTKRAMAKQLIEAMEQLGHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTYEYWQRM 147 (306)
T ss_dssp --------------CGGGSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCHHHHHHHC
T ss_pred --------------cCCCCHHHHHHHHHHHHHHhCCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCCCCccchhhh
Confidence 002799999999999999999999999999999999999999999999999999985421000000
Q ss_pred CCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhc--CCCChHHHHHHHHhhccChhHHHHHHHHH
Q 013006 300 IRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYAD--HATNVDTVFTRILETTQHPAAAASFASIM 377 (451)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (451)
..........|.......... ..+. .......+...+..+... .....+.....+......+.........+
T Consensus 148 -~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (306)
T 3r40_A 148 -NRAYALKIYHWSFLAQPAPLP----ENLL-GGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFADPMRRHVMCEDY 221 (306)
T ss_dssp -SHHHHHHSTHHHHHTSCTTHH----HHHH-TSCHHHHHHHHHHHTSSSSSSTTSCHHHHHHHHHHHTSHHHHHHHHHHH
T ss_pred -hhhhhhhhHHHHHhhcccchH----HHHH-cCCHHHHHHHHhhcccCCCccccCCHHHHHHHHHHHccCCCcchhhHHH
Confidence 000000000000000000000 0000 001111222333332222 22223344444444444433332222222
Q ss_pred hcCCCCCchh---HHhhhccCCCCCEEEEeeCCCCCCC-hHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 378 FAPQGNLSFR---EALSRCQMNGVPICLIYGKEDPWVK-PVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 378 ~~~~~~~~~~---~~~~~l~~i~~PvLii~G~~D~~v~-~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
.... ..... .....+.++++|+|+|+|++|.+++ ....+.+.+..+++++.++ ++||++++|+|+++++.|
T Consensus 222 ~~~~-~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~-~~gH~~~~e~p~~~~~~i 296 (306)
T 3r40_A 222 RAGA-YADFEHDKIDVEAGNKIPVPMLALWGASGIAQSAATPLDVWRKWASDVQGAPI-ESGHFLPEEAPDQTAEAL 296 (306)
T ss_dssp HHHH-THHHHHHHHHHHHTCCBCSCEEEEEETTCC------CHHHHHHHBSSEEEEEE-SSCSCHHHHSHHHHHHHH
T ss_pred Hhcc-cccchhhhhhhhhccCCCcceEEEEecCCcccCchhHHHHHHhhcCCCeEEEe-cCCcCchhhChHHHHHHH
Confidence 1110 00011 1112468899999999999999999 5666777888899999999 789999999999999876
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-31 Score=251.06 Aligned_cols=269 Identities=16% Similarity=0.192 Sum_probs=164.7
Q ss_pred ccceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013006 135 TSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGD 213 (451)
Q Consensus 135 ~~~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~ 213 (451)
...+++ .+|.+++|...|++ +..++|||+||++++...|...+..+ .++|+|+++|+||||.|+.+...
T Consensus 6 ~~~~~~-~~g~~l~~~~~g~~-~~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~-------- 75 (293)
T 1mtz_A 6 IENYAK-VNGIYIYYKLCKAP-EEKAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEPDQS-------- 75 (293)
T ss_dssp EEEEEE-ETTEEEEEEEECCS-SCSEEEEEECCTTTCCSGGGGGGGGGGGGTEEEEEECCTTSTTSCCCCGG--------
T ss_pred cceEEE-ECCEEEEEEEECCC-CCCCeEEEEeCCCCcchhHHHHHHHHHhcCcEEEEecCCCCccCCCCCCC--------
Confidence 334444 46999999999863 12378999999866655554444444 55799999999999999754310
Q ss_pred chhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh-CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCC
Q 013006 214 STEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV-IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPF 292 (451)
Q Consensus 214 ~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l-~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~ 292 (451)
.++++++++|+.++++++ ++++++|+||||||.+++.+|.++|++|+++|++++.+.
T Consensus 76 ----------------------~~~~~~~~~dl~~~~~~l~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 133 (293)
T 1mtz_A 76 ----------------------KFTIDYGVEEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSS 133 (293)
T ss_dssp ----------------------GCSHHHHHHHHHHHHHHHHTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSB
T ss_pred ----------------------cccHHHHHHHHHHHHHHhcCCCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccC
Confidence 279999999999999999 999999999999999999999999999999999998642
Q ss_pred CCCCCCCCCchHHhhhcCCCCCCCChHH-HHHHHHHHHHhcCChHHHHHHHHHHhhcC---CCChHHHHHHHHhhccChh
Q 013006 293 WGFSPNPIRSPKLARILPWSGTFPLPAS-VRKLIEFIWQKISDPESIAEVLKQVYADH---ATNVDTVFTRILETTQHPA 368 (451)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 368 (451)
. ............. ++.. ...+.....................+... ..................
T Consensus 134 ~--------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 202 (293)
T 1mtz_A 134 V--------PLTVKEMNRLIDE--LPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERR- 202 (293)
T ss_dssp H--------HHHHHHHHHHHHT--SCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHS-
T ss_pred h--------HHHHHHHHHHHHh--cCHHHHHHHHHhhccCCcChHHHHHHHHHHHHhhcccccCchHHHHHhHhhhccc-
Confidence 0 0000000000000 0010 01111000000001111111111111000 000111111111000000
Q ss_pred HHHHHHHHHhcC-----CCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccCh
Q 013006 369 AAASFASIMFAP-----QGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVP 443 (451)
Q Consensus 369 ~~~~~~~~~~~~-----~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p 443 (451)
..+. .+... .......+....+.++++|+|+|+|++| .+++..++++.+.+|++++++++++||++++|+|
T Consensus 203 --~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D-~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p 278 (293)
T 1mtz_A 203 --NVYR-IMNGPNEFTITGTIKDWDITDKISAIKIPTLITVGEYD-EVTPNVARVIHEKIAGSELHVFRDCSHLTMWEDR 278 (293)
T ss_dssp --SHHH-HHTCSBTTBCCSTTTTCBCTTTGGGCCSCEEEEEETTC-SSCHHHHHHHHHHSTTCEEEEETTCCSCHHHHSH
T ss_pred --hhhh-hccCcceecccccccCCChhhhhccCCCCEEEEeeCCC-CCCHHHHHHHHHhCCCceEEEeCCCCCCccccCH
Confidence 0000 00000 0011111234456788999999999999 7788889999999999999999999999999999
Q ss_pred HHHHhhh
Q 013006 444 EVCSLCL 450 (451)
Q Consensus 444 ~~v~~~I 450 (451)
+++++.|
T Consensus 279 ~~~~~~i 285 (293)
T 1mtz_A 279 EGYNKLL 285 (293)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999876
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-30 Score=249.34 Aligned_cols=119 Identities=26% Similarity=0.416 Sum_probs=106.3
Q ss_pred eeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCC--CCCCCCCCCCCch
Q 013006 139 WEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPD--EDPTPRSKEGDST 215 (451)
Q Consensus 139 ~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~--~~~~~~~~~~~~~ 215 (451)
+...+|.+++|...| ++|+|||+||++++...|..+++.|++ +|+|+++|+||||.|+.+ ...
T Consensus 15 ~~~~~g~~l~y~~~G----~g~~vvllHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~---------- 80 (328)
T 2cjp_A 15 MVAVNGLNMHLAELG----EGPTILFIHGFPELWYSWRHQMVYLAERGYRAVAPDLRGYGDTTGAPLNDP---------- 80 (328)
T ss_dssp EEEETTEEEEEEEEC----SSSEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTCBCCCTTCG----------
T ss_pred EecCCCcEEEEEEcC----CCCEEEEECCCCCchHHHHHHHHHHHHCCcEEEEECCCCCCCCCCcCcCCc----------
Confidence 334579999999998 368999999999999999999999965 799999999999999754 211
Q ss_pred hhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhC--CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 216 EEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI--REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 216 ~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~--~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
..|+++++++|+.+++++++ +++++||||||||.+++.+|.++|++|+++|++++.
T Consensus 81 -------------------~~~~~~~~a~dl~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~ 138 (328)
T 2cjp_A 81 -------------------SKFSILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVH 138 (328)
T ss_dssp -------------------GGGSHHHHHHHHHHHHHHHCTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred -------------------ccccHHHHHHHHHHHHHHhcCCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEccC
Confidence 12799999999999999999 999999999999999999999999999999999864
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.6e-31 Score=244.11 Aligned_cols=251 Identities=15% Similarity=0.133 Sum_probs=169.6
Q ss_pred cCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC--CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhh
Q 013006 142 KPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK--DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKN 219 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~ 219 (451)
.+|.+++|...| ++|+|||+||++++...|..++..|.+ +|+|+++|+||||.|.....
T Consensus 8 ~~g~~l~y~~~g----~~~~vv~lhG~~~~~~~~~~~~~~l~~~~g~~v~~~d~~G~G~s~~~~~--------------- 68 (272)
T 3fsg_A 8 LTRSNISYFSIG----SGTPIIFLHGLSLDKQSTCLFFEPLSNVGQYQRIYLDLPGMGNSDPISP--------------- 68 (272)
T ss_dssp ECTTCCEEEEEC----CSSEEEEECCTTCCHHHHHHHHTTSTTSTTSEEEEECCTTSTTCCCCSS---------------
T ss_pred ecCCeEEEEEcC----CCCeEEEEeCCCCcHHHHHHHHHHHhccCceEEEEecCCCCCCCCCCCC---------------
Confidence 478999999998 468999999999999999999999976 89999999999999975432
Q ss_pred ccccCCCCCCccccccccCHHHHHHHHHHHHHH-hCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCC
Q 013006 220 FLWGFGDKAQPWASELAYSVDLWQDQVCYFIKE-VIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPN 298 (451)
Q Consensus 220 ~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~-l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~ 298 (451)
++++++++|+.+++++ ++.++++|+||||||.+++.+|.++|++|+++|++++.........
T Consensus 69 -----------------~~~~~~~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 131 (272)
T 3fsg_A 69 -----------------STSDNVLETLIEAIEEIIGARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKR 131 (272)
T ss_dssp -----------------CSHHHHHHHHHHHHHHHHTTCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGC
T ss_pred -----------------CCHHHHHHHHHHHHHHHhCCCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCcccc
Confidence 5999999999999999 8899999999999999999999999999999999998643211100
Q ss_pred CCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHh
Q 013006 299 PIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMF 378 (451)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (451)
............+.... .......+.... ....+.....+........ . ... . .+...+.
T Consensus 132 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~------------~-~~~---~-~~~~~~~ 191 (272)
T 3fsg_A 132 LTGKHINILEEDINPVE-NKEYFADFLSMN--VIINNQAWHDYQNLIIPGL------------Q-KED---K-TFIDQLQ 191 (272)
T ss_dssp CCCCCCCEECSCCCCCT-TGGGHHHHHHHC--SEESHHHHHHHHHHTHHHH------------H-HCC---H-HHHHHHT
T ss_pred ccccchhhhhhhhhccc-CHHHHHHHHHHh--ccCCCchhHHHHHHhhhhh------------h-hcc---H-HHHHHHh
Confidence 00000000000111110 111111111100 0011111111111000000 0 000 0 0111111
Q ss_pred cCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 379 APQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 379 ~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
.. .... .+....+.++++|+|+|+|++|.++|++..+.+.+.+|++++++++++||++++|+|+++++.|
T Consensus 192 ~~-~~~~-~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i 261 (272)
T 3fsg_A 192 NN-YSFT-FEEKLKNINYQFPFKIMVGRNDQVVGYQEQLKLINHNENGEIVLLNRTGHNLMIDQREAVGFHF 261 (272)
T ss_dssp TS-CSCT-THHHHTTCCCSSCEEEEEETTCTTTCSHHHHHHHTTCTTEEEEEESSCCSSHHHHTHHHHHHHH
T ss_pred hh-cCCC-hhhhhhhccCCCCEEEEEeCCCCcCCHHHHHHHHHhcCCCeEEEecCCCCCchhcCHHHHHHHH
Confidence 11 1111 1222345789999999999999999999999999999999999999999999999999999876
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-30 Score=247.83 Aligned_cols=273 Identities=19% Similarity=0.212 Sum_probs=172.9
Q ss_pred eecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhh
Q 013006 140 EWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKN 219 (451)
Q Consensus 140 ~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~ 219 (451)
...+|.+++|...| ++++|||+||++.+...|..+++.|+++|+|+++|+||||.|..+....
T Consensus 10 ~~~~~~~~~~~~~g----~g~~~vllHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~s~~~~~~~------------- 72 (291)
T 3qyj_A 10 VDTTEARINLVKAG----HGAPLLLLHGYPQTHVMWHKIAPLLANNFTVVATDLRGYGDSSRPASVP------------- 72 (291)
T ss_dssp EECSSCEEEEEEEC----CSSEEEEECCTTCCGGGGTTTHHHHTTTSEEEEECCTTSTTSCCCCCCG-------------
T ss_pred EecCCeEEEEEEcC----CCCeEEEECCCCCCHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCc-------------
Confidence 34579999999998 4789999999999999999999999999999999999999997543210
Q ss_pred ccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCC
Q 013006 220 FLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNP 299 (451)
Q Consensus 220 ~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~ 299 (451)
....|+.+.+++|+.++++.++.++++++||||||.+++.+|.++|++|+++|++++.+.......
T Consensus 73 -------------~~~~~~~~~~~~~~~~~~~~l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~p~~~~~~~- 138 (291)
T 3qyj_A 73 -------------HHINYSKRVMAQDQVEVMSKLGYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAPTHKMYRT- 138 (291)
T ss_dssp -------------GGGGGSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCHHHHHHT-
T ss_pred -------------cccccCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhCchhccEEEEECCCCcchhhhc-
Confidence 011279999999999999999999999999999999999999999999999999997532000000
Q ss_pred CCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChH-HHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHh
Q 013006 300 IRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPE-SIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMF 378 (451)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (451)
...........|......+.....+. . ..+. .+...+..+........++....+......+.........+.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (291)
T 3qyj_A 139 TDQEFATAYYHWFFLIQPDNLPETLI----G--ANPEYYLRKCLEKWGKDFSAFHPQALAEYIRCFSQPAVIHATCEDYR 212 (291)
T ss_dssp CCHHHHHHTTHHHHTTCSTTHHHHHH----H--TCHHHHHHHHHHHHCSCGGGSCHHHHHHHHHHHTSHHHHHHHHHHHH
T ss_pred chhhhhHHHHHHHHhccCCCchHHHH----c--CCHHHHHHHHHHhcCCCcccCCHHHHHHHHHHhcCCCcchhHHHHHH
Confidence 00000000000000000000000000 0 1111 122222222221122223444455544444443332222221
Q ss_pred cCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCCh-HHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 379 APQGNLSFREALSRCQMNGVPICLIYGKEDPWVKP-VWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 379 ~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~-~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
.........+....+.+++||+|+|+|++|.+.+. .....+.+..++.+..+++ +||++++|+|+++++.|
T Consensus 213 ~~~~~~~~~~~~~~~~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~-~GH~~~~E~P~~v~~~i 284 (291)
T 3qyj_A 213 AAATIDLEHDELDMKQKISCPVLVLWGEKGIIGRKYDVLATWRERAIDVSGQSLP-CGHFLPEEAPEETYQAI 284 (291)
T ss_dssp HHTTHHHHHHHTTTTCCBCSCEEEEEETTSSHHHHSCHHHHHHTTBSSEEEEEES-SSSCHHHHSHHHHHHHH
T ss_pred cccccchhhcchhcCCccccceEEEecccccccchhhHHHHHHhhcCCcceeecc-CCCCchhhCHHHHHHHH
Confidence 11000001122234678999999999999965432 2344555666788888885 89999999999999887
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=251.85 Aligned_cols=261 Identities=13% Similarity=0.116 Sum_probs=167.9
Q ss_pred eeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhh
Q 013006 139 WEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEK 218 (451)
Q Consensus 139 ~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~ 218 (451)
+...+|.+++|...|++ .+|+|||+||++++...|..+++.|+++|+|+++|+||||.|+.+...
T Consensus 25 ~~~~~g~~l~y~~~G~g--~~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~GhG~S~~~~~~------------- 89 (318)
T 2psd_A 25 QMNVLDSFINYYDSEKH--AENAVIFLHGNATSSYLWRHVVPHIEPVARCIIPDLIGMGKSGKSGNG------------- 89 (318)
T ss_dssp EEEETTEEEEEEECCSC--TTSEEEEECCTTCCGGGGTTTGGGTTTTSEEEEECCTTSTTCCCCTTS-------------
T ss_pred EEeeCCeEEEEEEcCCC--CCCeEEEECCCCCcHHHHHHHHHHhhhcCeEEEEeCCCCCCCCCCCCC-------------
Confidence 33457999999999853 346999999999999999999999988899999999999999764211
Q ss_pred hccccCCCCCCccccccccCHHHHHHHHHHHHHHhCC-CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCC--C
Q 013006 219 NFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR-EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWG--F 295 (451)
Q Consensus 219 ~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~-~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~--~ 295 (451)
.|+++++++|+.++++++++ ++++||||||||.+|+.+|.++|++|+++|++++..... .
T Consensus 90 -----------------~~~~~~~a~dl~~ll~~l~~~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~ 152 (318)
T 2psd_A 90 -----------------SYRLLDHYKYLTAWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESW 152 (318)
T ss_dssp -----------------CCSHHHHHHHHHHHHTTSCCCSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEECCSCBSCC
T ss_pred -----------------ccCHHHHHHHHHHHHHhcCCCCCeEEEEEChhHHHHHHHHHhChHhhheEEEeccccCCccch
Confidence 17999999999999999999 999999999999999999999999999999998642100 0
Q ss_pred CCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccCh-hHHHHHH
Q 013006 296 SPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHP-AAAASFA 374 (451)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 374 (451)
...+........+.. +. .... ...........+..... ....++....+......+ .......
T Consensus 153 ~~~~~~~~~~~~~~~-------~~-----~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (318)
T 2psd_A 153 DEWPDIEEDIALIKS-------EE-----GEKM--VLENNFFVETVLPSKIM--RKLEPEEFAAYLEPFKEKGEVRRPTL 216 (318)
T ss_dssp TTSCSCHHHHHHHHS-------TH-----HHHH--HTTTCHHHHTHHHHTCS--SCCCHHHHHHHHGGGCSSSGGGHHHH
T ss_pred hhhhhHHHHHHHHhc-------cc-----chhh--hhcchHHHHhhcccccc--ccCCHHHHHHHHHhhcCccccccchh
Confidence 000000000000000 00 0000 00000001111111000 011122222222222211 0000010
Q ss_pred HHHhcC-C-C-C-Cc----hhHHhhhccCC-CCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHH
Q 013006 375 SIMFAP-Q-G-N-LS----FREALSRCQMN-GVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEV 445 (451)
Q Consensus 375 ~~~~~~-~-~-~-~~----~~~~~~~l~~i-~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~ 445 (451)
.+.... . . . .. ..+....+.++ ++|+|+|+|++| ++++ ..+++++.+|+++++++ ++||++++|+|++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D-~~~~-~~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~ 293 (318)
T 2psd_A 217 SWPREIPLVKGGKPDVVQIVRNYNAYLRASDDLPKLFIESDPG-FFSN-AIVEGAKKFPNTEFVKV-KGLHFLQEDAPDE 293 (318)
T ss_dssp HHHHTCCBTTTSCHHHHHHHHHHHHHHHTCTTSCEEEEEEEEC-SSHH-HHHHHHTTSSSEEEEEE-EESSSGGGTCHHH
T ss_pred cccccccccccccchhHHHHHHHHHHhccccCCCeEEEEeccc-cCcH-HHHHHHHhCCCcEEEEe-cCCCCCHhhCHHH
Confidence 111000 0 0 0 00 01223345678 999999999999 8888 88899999999999999 7899999999999
Q ss_pred HHhhh
Q 013006 446 CSLCL 450 (451)
Q Consensus 446 v~~~I 450 (451)
|++.|
T Consensus 294 ~~~~i 298 (318)
T 2psd_A 294 MGKYI 298 (318)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99876
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-30 Score=240.93 Aligned_cols=262 Identities=21% Similarity=0.213 Sum_probs=174.8
Q ss_pred eeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhh
Q 013006 139 WEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEE 217 (451)
Q Consensus 139 ~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~ 217 (451)
+...+|.+|+|..+|++ ++|+|||+||++++...|..++..|.+ ||+|+++|+||+|.|.......
T Consensus 8 ~~~~~g~~l~~~~~g~~--~~~~vv~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~----------- 74 (286)
T 3qit_A 8 FLEFGGNQICLCSWGSP--EHPVVLCIHGILEQGLAWQEVALPLAAQGYRVVAPDLFGHGRSSHLEMVT----------- 74 (286)
T ss_dssp EEEETTEEEEEEEESCT--TSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSGG-----------
T ss_pred eeecCCceEEEeecCCC--CCCEEEEECCCCcccchHHHHHHHhhhcCeEEEEECCCCCCCCCCCCCCC-----------
Confidence 34467999999999964 578999999999999999999999965 5999999999999997554211
Q ss_pred hhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCC
Q 013006 218 KNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSP 297 (451)
Q Consensus 218 ~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~ 297 (451)
.++++++++|+..++++++.++++++|||+||.+++.+|.++|++|+++|++++........
T Consensus 75 ------------------~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~ 136 (286)
T 3qit_A 75 ------------------SYSSLTFLAQIDRVIQELPDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESK 136 (286)
T ss_dssp ------------------GCSHHHHHHHHHHHHHHSCSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCC--
T ss_pred ------------------CcCHHHHHHHHHHHHHhcCCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCCcccc
Confidence 27999999999999999999999999999999999999999999999999999865322111
Q ss_pred CCCCchHHhhhcCCCCCCC----ChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChh-----
Q 013006 298 NPIRSPKLARILPWSGTFP----LPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPA----- 368 (451)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 368 (451)
.......+.....+..... .+.... ........ ...........+........
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (286)
T 3qit_A 137 KESAVNQLTTCLDYLSSTPQHPIFPDVAT---------------AASRLRQA---IPSLSEEFSYILAQRITQPNQGGVR 198 (286)
T ss_dssp -CCHHHHHHHHHHHHTCCCCCCCBSSHHH---------------HHHHHHHH---STTSCHHHHHHHHHHTEEEETTEEE
T ss_pred chhhhHHHHHHHHHHhccccccccccHHH---------------HHHHhhcC---CcccCHHHHHHHhhcccccccccee
Confidence 0000111111100000000 000000 00001110 01111111111111110000
Q ss_pred ----HHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChH
Q 013006 369 ----AAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPE 444 (451)
Q Consensus 369 ----~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~ 444 (451)
...................+....+.++++|+++|+|++|.+++++..+.+.+.+|+++++++++ ||++++|+|+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~p~ 277 (286)
T 3qit_A 199 WSWDAIIRTRSILGLNNLPGGRSQYLEMLKSIQVPTTLVYGDSSKLNRPEDLQQQKMTMTQAKRVFLSG-GHNLHIDAAA 277 (286)
T ss_dssp ECSCGGGGGHHHHTTTSCTTHHHHHHHHHHHCCSCEEEEEETTCCSSCHHHHHHHHHHSTTSEEEEESS-SSCHHHHTHH
T ss_pred eeechhhhccccccccccccchhHHHHHHhccCCCeEEEEeCCCcccCHHHHHHHHHHCCCCeEEEeeC-CchHhhhChH
Confidence 00000000000000002234455667889999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhh
Q 013006 445 VCSLCL 450 (451)
Q Consensus 445 ~v~~~I 450 (451)
++++.|
T Consensus 278 ~~~~~i 283 (286)
T 3qit_A 278 ALASLI 283 (286)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999887
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=99.97 E-value=5e-32 Score=252.38 Aligned_cols=239 Identities=18% Similarity=0.232 Sum_probs=157.1
Q ss_pred eEEEEeecCCCCCCCC-cEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhcccc
Q 013006 145 FNVHYEKAGCENVNSP-PVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWG 223 (451)
Q Consensus 145 ~~l~y~~~g~~~~~~p-~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~ 223 (451)
.+|+|...|+ +| +|||+||++++...|..+++.|+++|+|+++|+||||.|... .
T Consensus 2 ~~l~~~~~G~----g~~~vvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~-~------------------- 57 (258)
T 1m33_A 2 NNIWWQTKGQ----GNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGF-G------------------- 57 (258)
T ss_dssp -CCCEEEECC----CSSEEEEECCTTCCGGGGGGTHHHHHTTSEEEEECCTTSTTCCSC-C-------------------
T ss_pred cceEEEEecC----CCCeEEEECCCCCChHHHHHHHHHhhcCcEEEEeeCCCCCCCCCC-C-------------------
Confidence 3578888883 56 999999999999999999999998999999999999999754 1
Q ss_pred CCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCch
Q 013006 224 FGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSP 303 (451)
Q Consensus 224 ~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~ 303 (451)
.++++++++++.+. ++ ++++|+||||||.+|+.+|.++|++|+++|++++.+......
T Consensus 58 ------------~~~~~~~~~~l~~~---l~-~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~------ 115 (258)
T 1m33_A 58 ------------ALSLADMAEAVLQQ---AP-DKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARD------ 115 (258)
T ss_dssp ------------CCCHHHHHHHHHTT---SC-SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBT------
T ss_pred ------------CcCHHHHHHHHHHH---hC-CCeEEEEECHHHHHHHHHHHHhhHhhceEEEECCCCCccccc------
Confidence 17888888877544 45 899999999999999999999999999999999864321100
Q ss_pred HHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcC---CCChHHHHHHHHh---hccCh--hHHHHHHH
Q 013006 304 KLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADH---ATNVDTVFTRILE---TTQHP--AAAASFAS 375 (451)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~--~~~~~~~~ 375 (451)
.|.. ..+.....+...+.. .....+...+... ..........+.. ....+ ........
T Consensus 116 ------~~~~--~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (258)
T 1m33_A 116 ------EWPG--IKPDVLAGFQQQLSD------DQQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLE 181 (258)
T ss_dssp ------TBCS--BCHHHHHHHHHHHHH------HHHHHHHHHHHTTSTTSTTHHHHHHHHHHHHHTSCCCCHHHHHHHHH
T ss_pred ------cccC--CCHHHHHHHHHHHhc------cHHHHHHHHHHHHhcCCccchhhHHHHHHHHHhccCCcHHHHHHHHH
Confidence 0110 001111111111100 0111111111110 0011111111111 00011 11111111
Q ss_pred HHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 376 IMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 376 ~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
.... .+....+.++++|+|+|+|++|.+++++..+.+.+.+|++++++++++||++++|+|+++++.|
T Consensus 182 ~~~~-------~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i 249 (258)
T 1m33_A 182 ILKT-------VDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLL 249 (258)
T ss_dssp HHHH-------CCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-CTTTCTTCEEEEETTCCSCHHHHSHHHHHHHH
T ss_pred HHHh-------CCHHHHHhhCCCCEEEEeecCCCCCCHHHHHHHHHhCccceEEEeCCCCCCccccCHHHHHHHH
Confidence 1111 1122345678999999999999999999888899999999999999999999999999999876
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-30 Score=245.71 Aligned_cols=254 Identities=13% Similarity=0.164 Sum_probs=168.4
Q ss_pred eecCCeEEEEeecCCCCCCCCcEEEecCCCCChhc-HHH-----HHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013006 140 EWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFH-YEK-----QLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGD 213 (451)
Q Consensus 140 ~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~-~~~-----~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~ 213 (451)
+-.+|.+|+|...|++++++|+|||+||++++... |.. +++.|+++|+|+++|+||||.|........
T Consensus 16 ~~~~~~~l~y~~~G~~~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~s~~~~~~~~------ 89 (286)
T 2qmq_A 16 VETPYGSVTFTVYGTPKPKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEIIQNFVRVHVDAPGMEEGAPVFPLGY------ 89 (286)
T ss_dssp EEETTEEEEEEEESCCCTTCCEEEEECCTTCCHHHHHHHHHTSHHHHHHHTTSCEEEEECTTTSTTCCCCCTTC------
T ss_pred cccCCeEEEEEeccCCCCCCCeEEEeCCCCCCchhhhhhhhhhchhHHHhcCCCEEEecCCCCCCCCCCCCCCC------
Confidence 34589999999999754467999999999999885 665 788898899999999999998864321110
Q ss_pred chhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCC
Q 013006 214 STEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFW 293 (451)
Q Consensus 214 ~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~ 293 (451)
..++++++++|+.+++++++.++++|+||||||.+++.+|.++|++|+++|++++.+..
T Consensus 90 ---------------------~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 148 (286)
T 2qmq_A 90 ---------------------QYPSLDQLADMIPCILQYLNFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNA 148 (286)
T ss_dssp ---------------------CCCCHHHHHHTHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCC
T ss_pred ---------------------CccCHHHHHHHHHHHHHHhCCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCCcc
Confidence 01499999999999999999999999999999999999999999999999999986421
Q ss_pred CCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhc----CCCChHHHHHHHHhhccChhH
Q 013006 294 GFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYAD----HATNVDTVFTRILETTQHPAA 369 (451)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 369 (451)
. .... ... ... .. .........+..++.. ........+............
T Consensus 149 ~------~~~~---------------~~~---~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (286)
T 2qmq_A 149 K------GWMD---------------WAA---HKL-TG-LTSSIPDMILGHLFSQEELSGNSELIQKYRGIIQHAPNLEN 202 (286)
T ss_dssp C------CHHH---------------HHH---HHH-HH-TTSCHHHHHHHHHSCHHHHHTTCHHHHHHHHHHHTCTTHHH
T ss_pred c------chhh---------------hhh---hhh-cc-ccccchHHHHHHHhcCCCCCcchHHHHHHHHHHHhcCCcch
Confidence 0 0000 000 000 00 0000111111111110 000001111111111111111
Q ss_pred HHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC-CCcEEEeCCCCCCccccChHHHHh
Q 013006 370 AASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP-EAPYYEISPAGHCPHDEVPEVCSL 448 (451)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp-~~~~~~i~~~gH~~~~e~p~~v~~ 448 (451)
...+...+.... .. ......+.++++|+|+|+|++|.++| ...+.+.+..+ ++++++++++||++++|+|+++++
T Consensus 203 ~~~~~~~~~~~~-~~--~~~~~~l~~i~~P~lii~G~~D~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~ 278 (286)
T 2qmq_A 203 IELYWNSYNNRR-DL--NFERGGETTLKCPVMLVVGDQAPHED-AVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTE 278 (286)
T ss_dssp HHHHHHHHHTCC-CC--CSEETTEECCCSCEEEEEETTSTTHH-HHHHHHHHSCGGGEEEEEETTCTTCHHHHCHHHHHH
T ss_pred HHHHHHHHhhhh-hh--hhhhchhccCCCCEEEEecCCCcccc-HHHHHHHHhcCCCceEEEeCCCCCcccccChHHHHH
Confidence 122222221111 11 11124567899999999999999998 55667777777 899999999999999999999998
Q ss_pred hh
Q 013006 449 CL 450 (451)
Q Consensus 449 ~I 450 (451)
.|
T Consensus 279 ~i 280 (286)
T 2qmq_A 279 AF 280 (286)
T ss_dssp HH
T ss_pred HH
Confidence 76
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.6e-31 Score=245.52 Aligned_cols=241 Identities=15% Similarity=0.124 Sum_probs=151.7
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELA 236 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 236 (451)
++++|||+||++.+...|..+++.|+ ++|+|+++|+||||.|+..... .
T Consensus 9 ~g~~vvllHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~------------------------------~ 58 (264)
T 2wfl_A 9 QQKHFVLVHGGCLGAWIWYKLKPLLESAGHKVTAVDLSAAGINPRRLDE------------------------------I 58 (264)
T ss_dssp CCCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGG------------------------------C
T ss_pred CCCeEEEECCCccccchHHHHHHHHHhCCCEEEEeecCCCCCCCCCccc------------------------------c
Confidence 57899999999999999999999995 5899999999999999643211 2
Q ss_pred cCHHHHHHHHHHHHHHhC-CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcC---CC
Q 013006 237 YSVDLWQDQVCYFIKEVI-REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILP---WS 312 (451)
Q Consensus 237 ~s~~~~a~dv~~ll~~l~-~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~---~~ 312 (451)
++++++++|+.+++++++ .++++||||||||++++.+|.++|++|+++|++++..................... +.
T Consensus 59 ~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (264)
T 2wfl_A 59 HTFRDYSEPLMEVMASIPPDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPADMML 138 (264)
T ss_dssp CSHHHHHHHHHHHHHHSCTTCCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCCCCTTSCTTHHHHHHHHHSCTTTTT
T ss_pred cCHHHHHHHHHHHHHHhCCCCCeEEEEeChHHHHHHHHHHhChhhhceeEEEeeccCCCCcchhhHHHHhhhcCcchhhh
Confidence 799999999999999996 68999999999999999999999999999999997421100000000000100000 00
Q ss_pred CCC----CChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhH
Q 013006 313 GTF----PLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFRE 388 (451)
Q Consensus 313 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (451)
... ..+.... ...... ...+...+..... .... ........+.... ...+... ....
T Consensus 139 ~~~~~~~~~~~~~~------~~~~~~----~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~--~~~~~~~-~~~~--- 199 (264)
T 2wfl_A 139 DSQFSTYGNPENPG------MSMILG----PQFMALKMFQNCS--VEDL-ELAKMLTRPGSLF--FQDLAKA-KKFS--- 199 (264)
T ss_dssp TCEEEEESCTTSCE------EEEECC----HHHHHHHTSTTSC--HHHH-HHHHHHCCCEECC--HHHHTTS-CCCC---
T ss_pred hhhhhhccCCCCCc------chhhhh----HHHHHHHHhcCCC--HHHH-HHHHhccCCCccc--ccccccc-cccC---
Confidence 000 0000000 000000 0111111111000 0000 0010000000000 0000000 0000
Q ss_pred HhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 389 ALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 389 ~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
... ..++|+|+|+|++|.++|++..+.+++.+|++++++++++||++++|+|++|++.|
T Consensus 200 -~~~--~~~~P~l~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~P~~~~~~l 258 (264)
T 2wfl_A 200 -TER--YGSVKRAYIFCNEDKSFPVEFQKWFVESVGADKVKEIKEADHMGMLSQPREVCKCL 258 (264)
T ss_dssp -TTT--GGGSCEEEEEETTCSSSCHHHHHHHHHHHCCSEEEEETTCCSCHHHHSHHHHHHHH
T ss_pred -hHH--hCCCCeEEEEeCCcCCCCHHHHHHHHHhCCCceEEEeCCCCCchhhcCHHHHHHHH
Confidence 001 13689999999999999999999999999999999999999999999999999876
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=99.97 E-value=6.4e-31 Score=248.59 Aligned_cols=246 Identities=20% Similarity=0.292 Sum_probs=167.6
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCCCChhcHH-HHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhc
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYE-KQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNF 220 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~-~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~ 220 (451)
+|.+++|...| ++|+|||+||++++...|. .++..| .++|+|+++|+||+|.|..+..
T Consensus 31 ~~~~l~y~~~g----~~~~vv~lHG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~---------------- 90 (293)
T 3hss_A 31 RVINLAYDDNG----TGDPVVFIAGRGGAGRTWHPHQVPAFLAAGYRCITFDNRGIGATENAEG---------------- 90 (293)
T ss_dssp CEEEEEEEEEC----SSEEEEEECCTTCCGGGGTTTTHHHHHHTTEEEEEECCTTSGGGTTCCS----------------
T ss_pred ccceEEEEEcC----CCCEEEEECCCCCchhhcchhhhhhHhhcCCeEEEEccCCCCCCCCccc----------------
Confidence 68999999999 4689999999999999998 677777 6789999999999999864422
Q ss_pred cccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCC
Q 013006 221 LWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPI 300 (451)
Q Consensus 221 ~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~ 300 (451)
++++++++|+..++++++.++++|+|||+||.+++.+|.++|++|+++|++++.+...
T Consensus 91 ----------------~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~------ 148 (293)
T 3hss_A 91 ----------------FTTQTMVADTAALIETLDIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLD------ 148 (293)
T ss_dssp ----------------CCHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCC------
T ss_pred ----------------CCHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCC------
Confidence 7999999999999999999999999999999999999999999999999999864210
Q ss_pred CchHHhhhcCCCCCCCChHHHHHHH-HHHHHhcCChHHHHHHHHH--HhhcCCCChH---HHHHHHHhhccChhHHHHHH
Q 013006 301 RSPKLARILPWSGTFPLPASVRKLI-EFIWQKISDPESIAEVLKQ--VYADHATNVD---TVFTRILETTQHPAAAASFA 374 (451)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 374 (451)
.. . ....... .........+......... .+........ ..+........... ...+.
T Consensus 149 --~~-~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 212 (293)
T 3hss_A 149 --RA-R------------QFFNKAEAELYDSGVQLPPTYDARARLLENFSRKTLNDDVAVGDWIAMFSMWPIKS-TPGLR 212 (293)
T ss_dssp --HH-H------------HHHHHHHHHHHHHTCCCCHHHHHHHHHHHHSCHHHHTCHHHHHHHHHHHHHSCCCC-CHHHH
T ss_pred --hh-h------------hHHHHHHHHHHhhcccchhhHHHHHHHhhhcccccccccccHHHHHHHHhhccccc-cHHHH
Confidence 00 0 0000000 0000001111111111000 0000000000 00111111100000 00111
Q ss_pred HHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 375 SIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
... .. ....+....+.++++|+|+|+|++|.++|++..+.+.+.+|++++.+++++||+++.++|+++++.|
T Consensus 213 ~~~-~~---~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i 284 (293)
T 3hss_A 213 CQL-DC---APQTNRLPAYRNIAAPVLVIGFADDVVTPPYLGREVADALPNGRYLQIPDAGHLGFFERPEAVNTAM 284 (293)
T ss_dssp HHH-TS---SCSSCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHSTTEEEEEETTCCTTHHHHSHHHHHHHH
T ss_pred hHh-hh---ccccchHHHHhhCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCceEEEeCCCcchHhhhCHHHHHHHH
Confidence 111 11 1112334456789999999999999999999999999999999999999999999999999998876
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-30 Score=250.67 Aligned_cols=256 Identities=20% Similarity=0.238 Sum_probs=169.8
Q ss_pred cCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhcc
Q 013006 142 KPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFL 221 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~ 221 (451)
.++.+|+|..+|+ ++|+|||+||++++...|..++..| +|+|+++|+||+|.|......
T Consensus 67 ~~~~~~~~~~~g~---~~~~vv~~hG~~~~~~~~~~~~~~l--g~~Vi~~D~~G~G~S~~~~~~---------------- 125 (330)
T 3p2m_A 67 VQAGAISALRWGG---SAPRVIFLHGGGQNAHTWDTVIVGL--GEPALAVDLPGHGHSAWREDG---------------- 125 (330)
T ss_dssp EEETTEEEEEESS---SCCSEEEECCTTCCGGGGHHHHHHS--CCCEEEECCTTSTTSCCCSSC----------------
T ss_pred ecCceEEEEEeCC---CCCeEEEECCCCCccchHHHHHHHc--CCeEEEEcCCCCCCCCCCCCC----------------
Confidence 4567899999996 4689999999999999999999998 899999999999999754321
Q ss_pred ccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCC
Q 013006 222 WGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIR 301 (451)
Q Consensus 222 w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~ 301 (451)
.++++++++|+.+++++++.++++|+||||||.+++.+|.++|++|+++|++++.+..
T Consensus 126 --------------~~~~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~-------- 183 (330)
T 3p2m_A 126 --------------NYSPQLNSETLAPVLRELAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSA-------- 183 (330)
T ss_dssp --------------BCCHHHHHHHHHHHHHHSSTTCCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHH--------
T ss_pred --------------CCCHHHHHHHHHHHHHHhCCCCcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCcc--------
Confidence 2799999999999999999999999999999999999999999999999999985310
Q ss_pred chHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCC
Q 013006 302 SPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQ 381 (451)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (451)
............. ..... ............+..............+...............+........
T Consensus 184 ~~~~~~~~~~~~~---------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (330)
T 3p2m_A 184 LQRHAELTAEQRG---------TVALM-HGEREFPSFQAMLDLTIAAAPHRDVKSLRRGVFHNSRRLDNGNWVWRYDAIR 253 (330)
T ss_dssp HHHHHHHTCC---------------------CCBSCHHHHHHHHHHHCTTSCHHHHHHHHHTTEEECSSSCEEESSCCCS
T ss_pred chhhhhhhhhhhh---------hhhhh-cCCccccCHHHHHHHHHhcCCCCCHHHHHHHHHhcccccCCCceEEeechhh
Confidence 0000000000000 00000 0000001111111111111111111111111111000000000000000001
Q ss_pred CCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCc-EEEeCCCCCCccccChHHHHhhh
Q 013006 382 GNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAP-YYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 382 ~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~-~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
......+....+.++++|+|+|+|++|.+++++..+++++.+|+++ +++++++||++++|+|+++++.|
T Consensus 254 ~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i 323 (330)
T 3p2m_A 254 TFGDFAGLWDDVDALSAPITLVRGGSSGFVTDQDTAELHRRATHFRGVHIVEKSGHSVQSDQPRALIEIV 323 (330)
T ss_dssp BCCCHHHHHHHHHHCCSCEEEEEETTCCSSCHHHHHHHHHHCSSEEEEEEETTCCSCHHHHCHHHHHHHH
T ss_pred CccccHHHHHHHhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeeEEEeCCCCCCcchhCHHHHHHHH
Confidence 1112233445667899999999999999999999999999999999 99999999999999999999876
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-30 Score=241.49 Aligned_cols=243 Identities=13% Similarity=0.082 Sum_probs=151.6
Q ss_pred CCcEEEecCCCCChhcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccccc
Q 013006 159 SPPVLFLPGFGVGSFHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAY 237 (451)
Q Consensus 159 ~p~VlllHG~~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 237 (451)
+++|||+||++.+...|+.+++.|+ ++|+|+++|+||||.|+..... .+
T Consensus 3 ~~~vvllHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~------------------------------~~ 52 (257)
T 3c6x_A 3 FAHFVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEE------------------------------IG 52 (257)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGG------------------------------CC
T ss_pred CCcEEEEcCCccCcCCHHHHHHHHHhCCCEEEEeCCCCCCCCCCCccc------------------------------cc
Confidence 5789999999999999999999996 4799999999999999643211 27
Q ss_pred CHHHHHHHHHHHHHHhC-CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCc--hHHhhhc-CCCC
Q 013006 238 SVDLWQDQVCYFIKEVI-REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRS--PKLARIL-PWSG 313 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l~-~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~--~~~~~~~-~~~~ 313 (451)
+++++++|+.+++++++ .++++||||||||++++.+|.++|++|+++|++++...... ..... ....... .+..
T Consensus 53 ~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~va~~~a~~~p~~v~~lVl~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 130 (257)
T 3c6x_A 53 SFDEYSEPLLTFLEALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTE--HCPSYVVDKLMEVFPDWKD 130 (257)
T ss_dssp SHHHHTHHHHHHHHTSCTTCCEEEEEEETHHHHHHHHHHHHGGGEEEEEEEEECCCCSS--SCTTHHHHHHHHHSCCCTT
T ss_pred CHHHHHHHHHHHHHhccccCCeEEEEECcchHHHHHHHHhCchhhheEEEEecccCCCC--CcchhHHHHHhhcCcchhh
Confidence 99999999999999995 68999999999999999999999999999999998531100 00000 0010000 0000
Q ss_pred CCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhc
Q 013006 314 TFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRC 393 (451)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 393 (451)
... ................+ ..+...+..... ..... .......+....... +.... ... ...+
T Consensus 131 ~~~--~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~--~~~~~-~~~----~~~~ 194 (257)
T 3c6x_A 131 TTY--FTYTKDGKEITGLKLGF----TLLRENLYTLCG--PEEYE-LAKMLTRKGSLFQNI--LAKRP-FFT----KEGY 194 (257)
T ss_dssp CEE--EEEEETTEEEEEEECCH----HHHHHHTSTTSC--HHHHH-HHHHHCCCBCCCHHH--HHHSC-CCC----TTTG
T ss_pred hhh--hhccCCCCccccccccH----HHHHHHHhcCCC--HHHHH-HHHHhcCCCccchhh--hcccc-ccC----hhhc
Confidence 000 00000000000000000 111111111100 01000 000000000000000 00000 000 0111
Q ss_pred cCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhhC
Q 013006 394 QMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCLL 451 (451)
Q Consensus 394 ~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~Il 451 (451)
.++|+|+|+|++|.++|++.++++++.+|++++++++++||++++|+|++|++.|+
T Consensus 195 --~~~P~l~i~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~P~~~~~~l~ 250 (257)
T 3c6x_A 195 --GSIKKIYVWTDQDEIFLPEFQLWQIENYKPDKVYKVEGGDHKLQLTKTKEIAEILQ 250 (257)
T ss_dssp --GGSCEEEEECTTCSSSCHHHHHHHHHHSCCSEEEECCSCCSCHHHHSHHHHHHHHH
T ss_pred --CcccEEEEEeCCCcccCHHHHHHHHHHCCCCeEEEeCCCCCCcccCCHHHHHHHHH
Confidence 26899999999999999999999999999999999999999999999999998873
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-30 Score=238.73 Aligned_cols=249 Identities=16% Similarity=0.209 Sum_probs=169.1
Q ss_pred EEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCC
Q 013006 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFG 225 (451)
Q Consensus 146 ~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~ 225 (451)
+++|...|+ ..|+|||+||++++...|..+++.|+++|+|+++|+||||.|........
T Consensus 10 ~l~~~~~g~---~~p~vv~~HG~~~~~~~~~~~~~~l~~g~~v~~~D~~G~G~S~~~~~~~~------------------ 68 (269)
T 4dnp_A 10 ALNVRVVGS---GERVLVLAHGFGTDQSAWNRILPFFLRDYRVVLYDLVCAGSVNPDFFDFR------------------ 68 (269)
T ss_dssp HTTCEEECS---CSSEEEEECCTTCCGGGGTTTGGGGTTTCEEEEECCTTSTTSCGGGCCTT------------------
T ss_pred HhhhhhcCC---CCCEEEEEeCCCCcHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCcc------------------
Confidence 456677774 45899999999999999999999998899999999999999964211100
Q ss_pred CCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHH
Q 013006 226 DKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKL 305 (451)
Q Consensus 226 ~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~ 305 (451)
..++++++++|+.+++++++.++++|+||||||.+++.+|.++|++|+++|++++.+.....
T Consensus 69 ---------~~~~~~~~~~~~~~~~~~~~~~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~--------- 130 (269)
T 4dnp_A 69 ---------RYTTLDPYVDDLLHILDALGIDCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLND--------- 130 (269)
T ss_dssp ---------TCSSSHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCB---------
T ss_pred ---------ccCcHHHHHHHHHHHHHhcCCCeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCCh---------
Confidence 01589999999999999999999999999999999999999999999999999986431111
Q ss_pred hhhcCCCCCCCChHHHHHHHHHHHHhcCChHHH-HHHHHHHhhcCCCChHHHHHHHHhhc--cChhHHHHHHHHHhcCCC
Q 013006 306 ARILPWSGTFPLPASVRKLIEFIWQKISDPESI-AEVLKQVYADHATNVDTVFTRILETT--QHPAAAASFASIMFAPQG 382 (451)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 382 (451)
..|...+. ......+...... ..... ..+......... ......+.... ..+.....+......
T Consensus 131 ---~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 197 (269)
T 4dnp_A 131 ---EDYHGGFE-QGEIEKVFSAMEA---NYEAWVNGFAPLAVGADV---PAAVREFSRTLFNMRPDITLFVSRTVFN--- 197 (269)
T ss_dssp ---TTBCCSBC-HHHHHHHHHHHHH---CHHHHHHHHHHHHHCSSC---HHHHHHHHHHHHHSCHHHHHHHHHHHHT---
T ss_pred ---HHhccccc-hHHHHHHHHhccc---cHHHHHHHhhhhhccCCC---hhHHHHHHHHHHccCcchhhhHhhhhcc---
Confidence 01111111 1112222111111 11111 111111111111 11222222111 111111111111111
Q ss_pred CCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC-CcEEEeCCCCCCccccChHHHHhhh
Q 013006 383 NLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE-APYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 383 ~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~-~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
.+....+.++++|+++|+|++|.+++++..+.+.+.+++ +++++++++||+++.|+|+++++.|
T Consensus 198 ----~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i 262 (269)
T 4dnp_A 198 ----SDMRGVLGLVKVPCHIFQTARDHSVPASVATYLKNHLGGKNTVHWLNIEGHLPHLSAPTLLAQEL 262 (269)
T ss_dssp ----CCCGGGGGGCCSCEEEEEEESBTTBCHHHHHHHHHHSSSCEEEEEEEEESSCHHHHCHHHHHHHH
T ss_pred ----hhhHhhhccccCCEEEEecCCCcccCHHHHHHHHHhCCCCceEEEeCCCCCCccccCHHHHHHHH
Confidence 122345667899999999999999999999999999998 7999999999999999999999876
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.8e-30 Score=242.46 Aligned_cols=239 Identities=15% Similarity=0.135 Sum_probs=151.3
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELA 236 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 236 (451)
.+++|||+||++.+...|..+++.|+ ++|+|+++|+||||.|+..... .
T Consensus 3 ~~~~vvllHG~~~~~~~w~~~~~~L~~~g~rVia~Dl~G~G~S~~~~~~------------------------------~ 52 (273)
T 1xkl_A 3 EGKHFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEE------------------------------L 52 (273)
T ss_dssp CCCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEECCCTTSTTCCCCGGG------------------------------C
T ss_pred CCCeEEEECCCCCCcchHHHHHHHHHhCCCEEEEecCCCCCCCccCccc------------------------------c
Confidence 46899999999999999999999995 5799999999999999643211 2
Q ss_pred cCHHHHHHHHHHHHHHhC-CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCc--hHHhhhcC---
Q 013006 237 YSVDLWQDQVCYFIKEVI-REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRS--PKLARILP--- 310 (451)
Q Consensus 237 ~s~~~~a~dv~~ll~~l~-~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~--~~~~~~~~--- 310 (451)
++++++++|+.+++++++ .++++||||||||++++.+|.++|++|+++|++++....... .... ........
T Consensus 53 ~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 130 (273)
T 1xkl_A 53 RTLYDYTLPLMELMESLSADEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVH--NSSFVLEQYNERTPAEN 130 (273)
T ss_dssp CSHHHHHHHHHHHHHTSCSSSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSS--CTTHHHHHHHHTSCTTT
T ss_pred cCHHHHHHHHHHHHHHhccCCCEEEEecCHHHHHHHHHHHhChHhheEEEEEeccCCCCCC--cHHHHHHHhhccCChhh
Confidence 799999999999999997 589999999999999999999999999999999974211000 0000 00101000
Q ss_pred CCCC----CCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCch
Q 013006 311 WSGT----FPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSF 386 (451)
Q Consensus 311 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (451)
|... +..+.... ......+ ..+...+.... . ..... .......+..... ..... . ..+.
T Consensus 131 ~~~~~~~~~~~~~~~~------~~~~~~~----~~~~~~~~~~~-~-~~~~~-~~~~~~~~~~~~~-~~~~~-~-~~~~- 193 (273)
T 1xkl_A 131 WLDTQFLPYGSPEEPL------TSMFFGP----KFLAHKLYQLC-S-PEDLA-LASSLVRPSSLFM-EDLSK-A-KYFT- 193 (273)
T ss_dssp TTTCEEEECSCTTSCC------EEEECCH----HHHHHHTSTTS-C-HHHHH-HHHHHCCCBCCCH-HHHHH-C-CCCC-
T ss_pred HHHHHHhhccCCCCCc------cccccCH----HHHHHHhhccC-C-HHHHH-HHHHhcCCCchhh-hhhhc-c-cccc-
Confidence 0000 00000000 0000000 01111111100 0 00000 0000000000000 00000 0 0000
Q ss_pred hHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 387 REALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 387 ~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
.. ...++|+|+|+|++|.++|++.++++++.+|++++++++++||++++|+|++|++.|
T Consensus 194 ---~~--~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~p~~~~~~i~~aGH~~~~e~P~~~~~~i 252 (273)
T 1xkl_A 194 ---DE--RFGSVKRVYIVCTEDKGIPEEFQRWQIDNIGVTEAIEIKGADHMAMLCEPQKLCASL 252 (273)
T ss_dssp ---TT--TGGGSCEEEEEETTCTTTTHHHHHHHHHHHCCSEEEEETTCCSCHHHHSHHHHHHHH
T ss_pred ---hh--hhCCCCeEEEEeCCccCCCHHHHHHHHHhCCCCeEEEeCCCCCCchhcCHHHHHHHH
Confidence 00 113689999999999999999999999999999999999999999999999999876
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.9e-30 Score=242.79 Aligned_cols=259 Identities=19% Similarity=0.246 Sum_probs=175.5
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhcc
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFL 221 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~ 221 (451)
++++++|...++.++++|+|||+||++++...|..++..|++ ||+|+++|+||||.|......
T Consensus 30 ~~~~~~~~~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~---------------- 93 (315)
T 4f0j_A 30 QPLSMAYLDVAPKKANGRTILLMHGKNFCAGTWERTIDVLADAGYRVIAVDQVGFCKSSKPAHY---------------- 93 (315)
T ss_dssp EEEEEEEEEECCSSCCSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSC----------------
T ss_pred CCeeEEEeecCCCCCCCCeEEEEcCCCCcchHHHHHHHHHHHCCCeEEEeecCCCCCCCCCCcc----------------
Confidence 457888888877666789999999999999999999999976 699999999999999764331
Q ss_pred ccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCC
Q 013006 222 WGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIR 301 (451)
Q Consensus 222 w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~ 301 (451)
.++++++++++..++++++.++++|+|||+||.+++.+|.++|++|+++|++++.....
T Consensus 94 --------------~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~------- 152 (315)
T 4f0j_A 94 --------------QYSFQQLAANTHALLERLGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIGLED------- 152 (315)
T ss_dssp --------------CCCHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCSSC-------
T ss_pred --------------ccCHHHHHHHHHHHHHHhCCCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcccCC-------
Confidence 17999999999999999999999999999999999999999999999999999853210
Q ss_pred chHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCC--ChHHHHHHHHhhccChhHHHHHHHHHhc
Q 013006 302 SPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHAT--NVDTVFTRILETTQHPAAAASFASIMFA 379 (451)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (451)
.......+ ......... ................+..... ............................
T Consensus 153 --~~~~~~~~-------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (315)
T 4f0j_A 153 --WKALGVPW-------RSVDDWYRR--DLQTSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAWNSALT 221 (315)
T ss_dssp --HHHHTCCC-------CCHHHHHHH--HTTCCHHHHHHHHHHHTSTTCCCGGGHHHHHHHHHHTTSTTHHHHHHHHHHH
T ss_pred --cccccchh-------hhhHHHHhh--cccCChHHHHHHHHHHHhccccCCchHHHHHHHHHHhhccCcchhhHHHHHh
Confidence 00000000 000111000 0011222233333322222211 1112222222211111111100000000
Q ss_pred CCCCCchhHHhhhccCCCCCEEEEeeCCCCCCC----------------hHHHHHHHHHCCCCcEEEeCCCCCCccccCh
Q 013006 380 PQGNLSFREALSRCQMNGVPICLIYGKEDPWVK----------------PVWGLQVKRQVPEAPYYEISPAGHCPHDEVP 443 (451)
Q Consensus 380 ~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~----------------~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p 443 (451)
. ......+....+.++++|+|+|+|++|.++| .+..+.+.+.++++++++++++||+++.++|
T Consensus 222 ~-~~~~~~~~~~~l~~~~~P~lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p 300 (315)
T 4f0j_A 222 Y-DMIFTQPVVYELDRLQMPTLLLIGEKDNTAIGKDAAPAELKARLGNYAQLGKDAARRIPQATLVEFPDLGHTPQIQAP 300 (315)
T ss_dssp H-HHHHHCCCGGGGGGCCSCEEEEEETTCCCCTTGGGSCHHHHTTSCCHHHHHHHHHHHSTTEEEEEETTCCSCHHHHSH
T ss_pred c-CccccchhhhhcccCCCCeEEEEecCCCcCccccccccccccccccchhhhhHHHhhcCCceEEEeCCCCcchhhhCH
Confidence 0 0000112334567889999999999999999 8888999999999999999999999999999
Q ss_pred HHHHhhh
Q 013006 444 EVCSLCL 450 (451)
Q Consensus 444 ~~v~~~I 450 (451)
+++++.|
T Consensus 301 ~~~~~~i 307 (315)
T 4f0j_A 301 ERFHQAL 307 (315)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999876
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-29 Score=238.96 Aligned_cols=266 Identities=14% Similarity=0.076 Sum_probs=176.5
Q ss_pred eeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhh
Q 013006 138 FWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEE 217 (451)
Q Consensus 138 ~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~ 217 (451)
.+...+|.+++|...|+ +|+|||+||++++...|..+++.|+++|+|+++|+||||.|..+.....
T Consensus 11 ~~~~~~g~~l~~~~~g~----~~~vv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~---------- 76 (297)
T 2qvb_A 11 KYLEIAGKRMAYIDEGK----GDAIVFQHGNPTSSYLWRNIMPHLEGLGRLVACDLIGMGASDKLSPSGP---------- 76 (297)
T ss_dssp EEEEETTEEEEEEEESS----SSEEEEECCTTCCGGGGTTTGGGGTTSSEEEEECCTTSTTSCCCSSCST----------
T ss_pred eEEEECCEEEEEEecCC----CCeEEEECCCCchHHHHHHHHHHHhhcCeEEEEcCCCCCCCCCCCCccc----------
Confidence 34456899999999984 6899999999999999999999998889999999999999975432100
Q ss_pred hhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCC-CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCC
Q 013006 218 KNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR-EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFS 296 (451)
Q Consensus 218 ~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~-~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~ 296 (451)
..++++++++|+.+++++++. ++++++||||||.+++.+|.++|++|+++|++++.......
T Consensus 77 -----------------~~~~~~~~~~~~~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~ 139 (297)
T 2qvb_A 77 -----------------DRYSYGEQRDFLFALWDALDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTW 139 (297)
T ss_dssp -----------------TSSCHHHHHHHHHHHHHHTTCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCSCBCG
T ss_pred -----------------cCcCHHHHHHHHHHHHHHcCCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccCCccC
Confidence 027999999999999999999 99999999999999999999999999999999986421100
Q ss_pred CCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccCh-hHHHHHHH
Q 013006 297 PNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHP-AAAASFAS 375 (451)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 375 (451)
... ............. +. ... ... .....+...+.... .....++....+......+ ........
T Consensus 140 ~~~--~~~~~~~~~~~~~---~~-~~~----~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (297)
T 2qvb_A 140 ADW--PPAVRGVFQGFRS---PQ-GEP----MAL--EHNIFVERVLPGAI--LRQLSDEEMNHYRRPFVNGGEDRRPTLS 205 (297)
T ss_dssp GGS--CGGGHHHHHHHTS---TT-HHH----HHH--TTCHHHHTHHHHTC--SSCCCHHHHHHHHGGGCSSSGGGHHHHH
T ss_pred CCC--ChHHHHHHHHHhc---cc-chh----hhc--cccHHHHHHHhccc--cccCCHHHHHHHHHHhcCcccchhhHHH
Confidence 000 0000000000000 00 000 000 00011111111110 1111223333333333222 22122222
Q ss_pred HHhcCCC--CC-----chhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHh
Q 013006 376 IMFAPQG--NL-----SFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSL 448 (451)
Q Consensus 376 ~~~~~~~--~~-----~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~ 448 (451)
....... .. ...+....+.++++|+|+|+|++|.+++++..+.+.+.+|+ +++++ ++||++++|+|+++++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~-~~gH~~~~~~p~~~~~ 283 (297)
T 2qvb_A 206 WPRNLPIDGEPAEVVALVNEYRSWLEETDMPKLFINAEPGAIITGRIRDYVRSWPNQ-TEITV-PGVHFVQEDSPEEIGA 283 (297)
T ss_dssp HHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHTSSSE-EEEEE-EESSCGGGTCHHHHHH
T ss_pred HHHhccccCCchhhHHHHHHHHhhcccccccEEEEecCCCCcCCHHHHHHHHHHcCC-eEEEe-cCccchhhhCHHHHHH
Confidence 2111100 00 11233455677899999999999999999999999999999 99999 9999999999999988
Q ss_pred hh
Q 013006 449 CL 450 (451)
Q Consensus 449 ~I 450 (451)
.|
T Consensus 284 ~i 285 (297)
T 2qvb_A 284 AI 285 (297)
T ss_dssp HH
T ss_pred HH
Confidence 76
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-29 Score=239.07 Aligned_cols=264 Identities=13% Similarity=0.062 Sum_probs=177.5
Q ss_pred eeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhh
Q 013006 138 FWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEE 217 (451)
Q Consensus 138 ~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~ 217 (451)
.+...+|.+++|...|+ +|+|||+||++++...|..+++.|+++|+|+++|+||||.|..+.....
T Consensus 12 ~~~~~~g~~l~~~~~g~----~~~vv~lHG~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~---------- 77 (302)
T 1mj5_A 12 KFIEIKGRRMAYIDEGT----GDPILFQHGNPTSSYLWRNIMPHCAGLGRLIACDLIGMGDSDKLDPSGP---------- 77 (302)
T ss_dssp EEEEETTEEEEEEEESC----SSEEEEECCTTCCGGGGTTTGGGGTTSSEEEEECCTTSTTSCCCSSCST----------
T ss_pred eEEEECCEEEEEEEcCC----CCEEEEECCCCCchhhhHHHHHHhccCCeEEEEcCCCCCCCCCCCCCCc----------
Confidence 34456899999999984 6899999999999999999999998889999999999999975432100
Q ss_pred hhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCC-CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCC
Q 013006 218 KNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR-EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFS 296 (451)
Q Consensus 218 ~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~-~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~ 296 (451)
..++++++++|+.+++++++. ++++|+||||||.+++.+|.++|++|+++|++++.+.....
T Consensus 78 -----------------~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 140 (302)
T 1mj5_A 78 -----------------ERYAYAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEW 140 (302)
T ss_dssp -----------------TSSCHHHHHHHHHHHHHHTTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCG
T ss_pred -----------------ccccHHHHHHHHHHHHHHhCCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCchhh
Confidence 127999999999999999999 99999999999999999999999999999999986421100
Q ss_pred CCCCCchHHhhhcCCCCCCCChHHHHHHHHH-HHHhcC-ChHHHHHHHHHHhhcCCCChHHHHHHHHhhccCh-hHHHHH
Q 013006 297 PNPIRSPKLARILPWSGTFPLPASVRKLIEF-IWQKIS-DPESIAEVLKQVYADHATNVDTVFTRILETTQHP-AAAASF 373 (451)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 373 (451)
.. ..... ......+... ...... ....+...+.... ......+....+......+ .....+
T Consensus 141 ~~--~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (302)
T 1mj5_A 141 AD--FPEQD------------RDLFQAFRSQAGEELVLQDNVFVEQVLPGLI--LRPLSEAEMAAYREPFLAAGEARRPT 204 (302)
T ss_dssp GG--SCGGG------------HHHHHHHHSTTHHHHHTTTCHHHHTHHHHTS--SSCCCHHHHHHHHGGGCSSSGGGHHH
T ss_pred hh--hhHHH------------HHHHHHHhccchhhhhcChHHHHHHHHHhcC--cccCCHHHHHHHHHHhhcccccccch
Confidence 00 00000 0000000000 000000 0011111111110 1111223333333333322 222222
Q ss_pred HHHHhcCCCC-------CchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHH
Q 013006 374 ASIMFAPQGN-------LSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVC 446 (451)
Q Consensus 374 ~~~~~~~~~~-------~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v 446 (451)
.......... ....+....+.++++|+|+|+|++|.++|++..+.+.+.+|+ +++++ ++||++++|+|+++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~-~~gH~~~~e~p~~~ 282 (302)
T 1mj5_A 205 LSWPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEPGALTTGRMRDFCRTWPNQ-TEITV-AGAHFIQEDSPDEI 282 (302)
T ss_dssp HHTGGGSCBTTBSHHHHHHHHHHHHHHTTCCSCEEEEEEEECSSSSHHHHHHHTTCSSE-EEEEE-EESSCGGGTCHHHH
T ss_pred HHHHHhccccccchhhHHHHHHHHhhhhccCCCeEEEEeCCCCCCChHHHHHHHHhcCC-ceEEe-cCcCcccccCHHHH
Confidence 2221111000 011234556788999999999999999999999999999999 99999 99999999999999
Q ss_pred Hhhh
Q 013006 447 SLCL 450 (451)
Q Consensus 447 ~~~I 450 (451)
++.|
T Consensus 283 ~~~i 286 (302)
T 1mj5_A 283 GAAI 286 (302)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9876
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.1e-29 Score=238.58 Aligned_cols=247 Identities=21% Similarity=0.297 Sum_probs=169.8
Q ss_pred ecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhc
Q 013006 141 WKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNF 220 (451)
Q Consensus 141 ~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~ 220 (451)
..+|.+++|...|+ +|+|||+||++++...|..++..|+++|+|+++|+||+|.|.....
T Consensus 54 ~~~~~~~~~~~~g~----~p~vv~lhG~~~~~~~~~~~~~~L~~~~~v~~~D~~G~G~S~~~~~---------------- 113 (314)
T 3kxp_A 54 DIGRITLNVREKGS----GPLMLFFHGITSNSAVFEPLMIRLSDRFTTIAVDQRGHGLSDKPET---------------- 113 (314)
T ss_dssp ECSSCEEEEEEECC----SSEEEEECCTTCCGGGGHHHHHTTTTTSEEEEECCTTSTTSCCCSS----------------
T ss_pred EECCEEEEEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHcCCeEEEEeCCCcCCCCCCCC----------------
Confidence 34789999999984 6899999999999999999999998899999999999999973322
Q ss_pred cccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCC
Q 013006 221 LWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPI 300 (451)
Q Consensus 221 ~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~ 300 (451)
.++++++++|+..++++++.++++++||||||.+++.+|.++|++|+++|++++.+.....
T Consensus 114 ---------------~~~~~~~~~dl~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~---- 174 (314)
T 3kxp_A 114 ---------------GYEANDYADDIAGLIRTLARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETE---- 174 (314)
T ss_dssp ---------------CCSHHHHHHHHHHHHHHHTSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHH----
T ss_pred ---------------CCCHHHHHHHHHHHHHHhCCCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcc----
Confidence 1799999999999999999999999999999999999999999999999999986421000
Q ss_pred CchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccCh--------hHHHH
Q 013006 301 RSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHP--------AAAAS 372 (451)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 372 (451)
............. ........ ....+...+. ................. .....
T Consensus 175 ~~~~~~~~~~~~~--~~~~~~~~--------------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (314)
T 3kxp_A 175 ALDALEARVNAGS--QLFEDIKA--------------VEAYLAGRYP---NIPADAIRIRAESGYQPVDGGLRPLASSAA 235 (314)
T ss_dssp HHHHHHHHTTTTC--SCBSSHHH--------------HHHHHHHHST---TSCHHHHHHHHHHSEEEETTEEEESSCHHH
T ss_pred hhhHHHHHhhhch--hhhcCHHH--------------HHHHHHhhcc---cCchHHHHHHhhhhhcccccccccccChhh
Confidence 0000001110000 00000111 1111111110 01111111111110000 00000
Q ss_pred HHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 373 FASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
......... .+....+.++++|+|+|+|++|.+++++..+++.+.++++++.+++++||+++.|+|+++++.|
T Consensus 236 ~~~~~~~~~-----~~~~~~~~~i~~P~Lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~g~gH~~~~e~~~~~~~~i 308 (314)
T 3kxp_A 236 MAQTARGLR-----SDLVPAYRDVTKPVLIVRGESSKLVSAAALAKTSRLRPDLPVVVVPGADHYVNEVSPEITLKAI 308 (314)
T ss_dssp HHHHHHHTT-----SCCHHHHHHCCSCEEEEEETTCSSSCHHHHHHHHHHCTTSCEEEETTCCSCHHHHCHHHHHHHH
T ss_pred hhhhccccC-----cchhhHhhcCCCCEEEEecCCCccCCHHHHHHHHHhCCCceEEEcCCCCCcchhhCHHHHHHHH
Confidence 011110000 0223345678999999999999999999999999999999999999999999999999998876
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-29 Score=239.95 Aligned_cols=253 Identities=17% Similarity=0.155 Sum_probs=169.3
Q ss_pred eeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchh
Q 013006 138 FWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTE 216 (451)
Q Consensus 138 ~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~ 216 (451)
++...+|.+|+|..+++.+...|+|||+||++++...|..++..|.+ +|+|+++|+||||.|......
T Consensus 21 ~~~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~----------- 89 (303)
T 3pe6_A 21 HLVNADGQYLFCRYWAPTGTPKALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERMV----------- 89 (303)
T ss_dssp EEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCSSTTC-----------
T ss_pred eEecCCCeEEEEEEeccCCCCCeEEEEECCCCchhhHHHHHHHHHHhCCCcEEEeCCCCCCCCCCCCCC-----------
Confidence 77788999999999987665678899999999999999999999966 799999999999999754322
Q ss_pred hhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCC----CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCC
Q 013006 217 EKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR----EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPF 292 (451)
Q Consensus 217 ~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~----~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~ 292 (451)
.++++++++|+.++++.+.. ++++++|||+||.+++.+|.++|++|+++|++++...
T Consensus 90 -------------------~~~~~~~~~d~~~~l~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 150 (303)
T 3pe6_A 90 -------------------VSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVL 150 (303)
T ss_dssp -------------------CSSTHHHHHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSS
T ss_pred -------------------CCCHHHHHHHHHHHHHHHhhccCCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECcccc
Confidence 15888899999999988754 4999999999999999999999999999999998532
Q ss_pred CCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccC---hhH
Q 013006 293 WGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQH---PAA 369 (451)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 369 (451)
.. .... ......................... ............+...... ...
T Consensus 151 ~~--------~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (303)
T 3pe6_A 151 AN--------PESA------------TTFKVLAAKVLNSVLPNLSSGPIDS----SVLSRNKTEVDIYNSDPLICRAGLK 206 (303)
T ss_dssp BC--------HHHH------------HHHHHHHHHHHHTTCCSCCCCCCCG----GGTCSCHHHHHHHHTCTTSCCSCCC
T ss_pred Cc--------hhcc------------HHHHHHHHHHHHHhcccccCCccch----hhhhcchhHHHHhccCccccccchh
Confidence 10 0000 0000000000000000000000000 0000000111111100000 000
Q ss_pred HHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC--CCcEEEeCCCCCCccccChHHHH
Q 013006 370 AASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP--EAPYYEISPAGHCPHDEVPEVCS 447 (451)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp--~~~~~~i~~~gH~~~~e~p~~v~ 447 (451)
........ ....+....+.++++|+|+|+|++|.+++++..+.+.+.++ ++++++++++||+++.++|++++
T Consensus 207 ~~~~~~~~------~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~ 280 (303)
T 3pe6_A 207 VCFGIQLL------NAVSRVERALPKLTVPFLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTN 280 (303)
T ss_dssp HHHHHHHH------HHHHHHHHHGGGCCSCEEEEEETTCSSBCHHHHHHHHHHCCCSSEEEEEETTCCSCGGGSCHHHHH
T ss_pred hhhHHHHH------HHHHHHHHHhhcCCCCEEEEeeCCCCCCChHHHHHHHHhcccCCceEEEeCCCccceeccchHHHH
Confidence 00000000 00123345567889999999999999999999999999998 78999999999999999998777
Q ss_pred hhh
Q 013006 448 LCL 450 (451)
Q Consensus 448 ~~I 450 (451)
+.+
T Consensus 281 ~~~ 283 (303)
T 3pe6_A 281 SVF 283 (303)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4.9e-29 Score=231.16 Aligned_cols=225 Identities=17% Similarity=0.220 Sum_probs=150.3
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhcc
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFL 221 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~ 221 (451)
+|..++|. + .+|+|||+||++++...|..+++.|+ ++|+|+++|+||||.|.....
T Consensus 6 ~~~~~~~~--~----~~~~vvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~GhG~s~~~~~----------------- 62 (247)
T 1tqh_A 6 PPKPFFFE--A----GERAVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELV----------------- 62 (247)
T ss_dssp CCCCEEEC--C----SSCEEEEECCTTCCTHHHHHHHHHHHHTTCEEEECCCTTSSSCHHHHT-----------------
T ss_pred CCCCeeeC--C----CCcEEEEECCCCCChHHHHHHHHHHHHCCCEEEecccCCCCCCHHHhc-----------------
Confidence 46677776 3 25789999999999999999999996 579999999999997632111
Q ss_pred ccCCCCCCccccccccCHHHHHHHHHH---HHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCC
Q 013006 222 WGFGDKAQPWASELAYSVDLWQDQVCY---FIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPN 298 (451)
Q Consensus 222 w~~~~~~~~~~~~~~~s~~~~a~dv~~---ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~ 298 (451)
.++++++++|+.+ +++++++++++|+||||||.+++.+|.++| |+++|++++.....
T Consensus 63 --------------~~~~~~~~~d~~~~~~~l~~~~~~~~~lvG~SmGG~ia~~~a~~~p--v~~lvl~~~~~~~~---- 122 (247)
T 1tqh_A 63 --------------HTGPDDWWQDVMNGYEFLKNKGYEKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIK---- 122 (247)
T ss_dssp --------------TCCHHHHHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHTTSC--CSCEEEESCCSSCC----
T ss_pred --------------CCCHHHHHHHHHHHHHHHHHcCCCeEEEEEeCHHHHHHHHHHHhCC--CCeEEEEcceeecC----
Confidence 1678888777654 667778899999999999999999999999 99999987632100
Q ss_pred CCCchHHhhhcCCCCCCCChHHHHHHHHHHHHh-cCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHH
Q 013006 299 PIRSPKLARILPWSGTFPLPASVRKLIEFIWQK-ISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIM 377 (451)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (451)
...... .........+... ...+....... ..+ ... .......+....
T Consensus 123 --~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~-~~~-~~~~~~~~~~~~ 171 (247)
T 1tqh_A 123 --SEETMY------------EGVLEYAREYKKREGKSEEQIEQEM---------------EKF-KQT-PMKTLKALQELI 171 (247)
T ss_dssp --CHHHHH------------HHHHHHHHHHHHHHTCCHHHHHHHH---------------HHH-TTS-CCTTHHHHHHHH
T ss_pred --cchhhh------------HHHHHHHHHhhcccccchHHHHhhh---------------hcc-cCC-CHHHHHHHHHHH
Confidence 000000 0000000000000 00011111000 000 000 001111111110
Q ss_pred hcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC--CcEEEeCCCCCCccccC-hHHHHhhh
Q 013006 378 FAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE--APYYEISPAGHCPHDEV-PEVCSLCL 450 (451)
Q Consensus 378 ~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~--~~~~~i~~~gH~~~~e~-p~~v~~~I 450 (451)
.+....+.++++|+|+|+|++|.++|++.++.+++.+|+ +++++++++||++++|+ |+++++.|
T Consensus 172 ---------~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~i 238 (247)
T 1tqh_A 172 ---------ADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHEDI 238 (247)
T ss_dssp ---------HHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCCSSEEEEEETTCCSSGGGSTTHHHHHHHH
T ss_pred ---------HHHHhhcccCCCCEEEEecCCCCCCCcchHHHHHHhcCCCceEEEEeCCCceeeccCccHHHHHHHH
Confidence 234456778999999999999999999999999999987 58999999999999985 79998875
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-29 Score=240.72 Aligned_cols=273 Identities=17% Similarity=0.198 Sum_probs=161.7
Q ss_pred CccceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCC
Q 013006 134 ITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEG 212 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~ 212 (451)
....+++..+|.+++|...|++ ++++|||+||++++... ..+...+ .++|+|+++|+||||.|.+.....
T Consensus 14 ~~~~~~~~~~g~~l~~~~~g~~--~g~~vvllHG~~~~~~~-~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~------ 84 (317)
T 1wm1_A 14 YDSGWLDTGDGHRIYWELSGNP--NGKPAVFIHGGPGGGIS-PHHRQLFDPERYKVLLFDQRGCGRSRPHASLD------ 84 (317)
T ss_dssp SEEEEEECSSSCEEEEEEEECT--TSEEEEEECCTTTCCCC-GGGGGGSCTTTEEEEEECCTTSTTCBSTTCCT------
T ss_pred ceeeEEEcCCCcEEEEEEcCCC--CCCcEEEECCCCCcccc-hhhhhhccccCCeEEEECCCCCCCCCCCcccc------
Confidence 4455677778999999999853 46789999998765432 2223344 357999999999999997532211
Q ss_pred CchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCC
Q 013006 213 DSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPF 292 (451)
Q Consensus 213 ~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~ 292 (451)
.++++++++|+.++++++++++++||||||||.+++.+|.++|++|+++|++++...
T Consensus 85 -----------------------~~~~~~~~~dl~~l~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 141 (317)
T 1wm1_A 85 -----------------------NNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTL 141 (317)
T ss_dssp -----------------------TCSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCC
T ss_pred -----------------------cccHHHHHHHHHHHHHHcCCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccCCC
Confidence 178999999999999999999999999999999999999999999999999987431
Q ss_pred CCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCCh---HHHHHHHHHHhhcCCCCh---HHHHHHHHhh---
Q 013006 293 WGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDP---ESIAEVLKQVYADHATNV---DTVFTRILET--- 363 (451)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--- 363 (451)
. ................+..... +....... .....+............ ...+..+...
T Consensus 142 ~--------~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (317)
T 1wm1_A 142 R--------KQRLHWYYQDGASRFFPEKWER----VLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVT 209 (317)
T ss_dssp C--------HHHHHHHHTSSGGGTSHHHHHH----HHTTSCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSS
T ss_pred c--------hhhhhHHhhccchhhcHHHHHH----HHhhccchhhcchHHHHHhhhcCCCccccccccccccccccchhh
Confidence 0 0000000000000000000000 00000000 000001000000000000 0000000000
Q ss_pred ---------ccChhHHHHHHHH---HhcCCCCCchhH-HhhhccCCC-CCEEEEeeCCCCCCChHHHHHHHHHCCCCcEE
Q 013006 364 ---------TQHPAAAASFASI---MFAPQGNLSFRE-ALSRCQMNG-VPICLIYGKEDPWVKPVWGLQVKRQVPEAPYY 429 (451)
Q Consensus 364 ---------~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~l~~i~-~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~ 429 (451)
...+.....+... ............ ....+.+++ +|+|+|+|++|.++|++.++.+++.+|+++++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~lii~G~~D~~~~~~~~~~l~~~~p~~~~~ 289 (317)
T 1wm1_A 210 LLPSRESASFGEDDFALAFARIENHYFTHLGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWPEAELH 289 (317)
T ss_dssp SSCCGGGGGGGCHHHHHHHHHHHHHHHHTGGGCSSTTHHHHTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHCTTSEEE
T ss_pred ccCCcccccccccchhhhHHHhhhhhhhcccccccchhhHhhcccccCCCEEEEEecCCCCCCHHHHHHHHhhCCCceEE
Confidence 0000000011000 000000000011 344566674 99999999999999999999999999999999
Q ss_pred EeCCCCCCcccc-ChHHHHhhh
Q 013006 430 EISPAGHCPHDE-VPEVCSLCL 450 (451)
Q Consensus 430 ~i~~~gH~~~~e-~p~~v~~~I 450 (451)
+++++||+++.+ .++++.+.|
T Consensus 290 ~i~~~gH~~~~~~~~~~~~~~i 311 (317)
T 1wm1_A 290 IVEGAGHSYDEPGILHQLMIAT 311 (317)
T ss_dssp EETTCCSSTTSHHHHHHHHHHH
T ss_pred EECCCCCCCCCcchHHHHHHHH
Confidence 999999998765 577777654
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-29 Score=242.76 Aligned_cols=258 Identities=16% Similarity=0.148 Sum_probs=172.4
Q ss_pred CCccc-eeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCC
Q 013006 133 PITSC-FWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSK 210 (451)
Q Consensus 133 ~~~~~-~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~ 210 (451)
+.... ++...||.+|+|..+++.+...|+|||+||++++...|..++..|++ +|+|+++|+||+|.|......
T Consensus 33 ~~~~~~~~~~~dg~~l~~~~~~p~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~----- 107 (342)
T 3hju_A 33 PYQDLPHLVNADGQYLFCRYWKPTGTPKALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERMV----- 107 (342)
T ss_dssp BTTSSCEEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCGGGGHHHHHHHHTTTEEEEEECCTTSTTSCSSTTC-----
T ss_pred ccccCceEEccCCeEEEEEEeCCCCCCCcEEEEECCCCcccchHHHHHHHHHhCCCeEEEEcCCCCcCCCCcCCC-----
Confidence 34444 67788999999999987665678899999999999999999999976 799999999999999754321
Q ss_pred CCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCC----CCEEEEEeCcchHHHHHHHHhCCCccceEEE
Q 013006 211 EGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR----EPVYVVGNSLGGFVAVYFAACNPHLVKGVTL 286 (451)
Q Consensus 211 ~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~----~~v~lvGhS~GG~val~~A~~~P~~v~~lvl 286 (451)
.++++++++|+.++++.+.. ++++|+||||||.+++.+|.++|++|+++|+
T Consensus 108 -------------------------~~~~~~~~~d~~~~l~~l~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl 162 (342)
T 3hju_A 108 -------------------------VSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVL 162 (342)
T ss_dssp -------------------------CSCTHHHHHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEE
T ss_pred -------------------------cCcHHHHHHHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCccccceEEE
Confidence 16888899999999988754 4999999999999999999999999999999
Q ss_pred eccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccC
Q 013006 287 LNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQH 366 (451)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (451)
+++....... . ..........+............. ..............+......
T Consensus 163 ~~~~~~~~~~----~----------------~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 218 (342)
T 3hju_A 163 ISPLVLANPE----S----------------ATTFKVLAAKVLNLVLPNLSLGPI----DSSVLSRNKTEVDIYNSDPLI 218 (342)
T ss_dssp ESCCCSCCTT----T----------------TSHHHHHHHHHHHHHCTTCBCCCC----CGGGSCSCHHHHHHHHTCTTC
T ss_pred ECcccccchh----h----------------hhHHHHHHHHHHHHhccccccCcc----cccccccchHHHHHHhcCccc
Confidence 9986421100 0 001111111110000000000000 000000000111111100000
Q ss_pred ---hhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC--CCcEEEeCCCCCCcccc
Q 013006 367 ---PAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP--EAPYYEISPAGHCPHDE 441 (451)
Q Consensus 367 ---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp--~~~~~~i~~~gH~~~~e 441 (451)
............ ...+....+.++++|+|+|+|++|.+++++..+.+.+.++ ++++++++++||+++.+
T Consensus 219 ~~~~~~~~~~~~~~~------~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 292 (342)
T 3hju_A 219 CRAGLKVCFGIQLLN------AVSRVERALPKLTVPFLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHKE 292 (342)
T ss_dssp CCSCCBHHHHHHHHH------HHHHHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCCSSEEEEEETTCCSCGGGS
T ss_pred ccccccHHHHHHHHH------HHHHHHHHHHhCCcCEEEEEeCCCcccChHHHHHHHHHcCCCCceEEEECCCCchhhcC
Confidence 000000000000 0123345567889999999999999999999999999998 78999999999999999
Q ss_pred ChHHHHhhh
Q 013006 442 VPEVCSLCL 450 (451)
Q Consensus 442 ~p~~v~~~I 450 (451)
+|+++++.+
T Consensus 293 ~~~~~~~~~ 301 (342)
T 3hju_A 293 LPEVTNSVF 301 (342)
T ss_dssp CHHHHHHHH
T ss_pred ChHHHHHHH
Confidence 998777653
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-29 Score=239.84 Aligned_cols=126 Identities=21% Similarity=0.237 Sum_probs=103.3
Q ss_pred CCccceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCC
Q 013006 133 PITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKE 211 (451)
Q Consensus 133 ~~~~~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~ 211 (451)
++...+++..+|.+++|...|++ ++++|||+||++++... ..+...+ .++|+|+++|+||||.|++.....
T Consensus 10 ~~~~~~~~~~~g~~l~y~~~G~~--~g~pvvllHG~~~~~~~-~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~----- 81 (313)
T 1azw_A 10 PYQQGSLKVDDRHTLYFEQCGNP--HGKPVVMLHGGPGGGCN-DKMRRFHDPAKYRIVLFDQRGSGRSTPHADLV----- 81 (313)
T ss_dssp CSEEEEEECSSSCEEEEEEEECT--TSEEEEEECSTTTTCCC-GGGGGGSCTTTEEEEEECCTTSTTSBSTTCCT-----
T ss_pred ccccceEEcCCCCEEEEEecCCC--CCCeEEEECCCCCcccc-HHHHHhcCcCcceEEEECCCCCcCCCCCcccc-----
Confidence 35566677778999999999853 46789999998765432 2233444 358999999999999997542211
Q ss_pred CCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 212 GDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 212 ~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
.++++++++|+.++++++++++++||||||||++++.+|.++|++|+++|++++.
T Consensus 82 ------------------------~~~~~~~~~dl~~l~~~l~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~ 136 (313)
T 1azw_A 82 ------------------------DNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIF 136 (313)
T ss_dssp ------------------------TCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred ------------------------cccHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhChhheeEEEEeccc
Confidence 1789999999999999999999999999999999999999999999999999874
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.97 E-value=6e-29 Score=237.61 Aligned_cols=243 Identities=19% Similarity=0.232 Sum_probs=165.6
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCC-CCCCCCCCCCCCCCCCCchhhhhcc
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQ-GMSLPDEDPTPRSKEGDSTEEKNFL 221 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~-G~S~~~~~~~~~~~~~~~~~~~~~~ 221 (451)
+|.+++|...|++ ++|+|||+||++++...|..++..|+++|+|+++|+||+ |.|..+..
T Consensus 53 ~~~~~~~~~~g~~--~~~~vv~lHG~~~~~~~~~~~~~~L~~g~~vi~~D~~G~gG~s~~~~~----------------- 113 (306)
T 2r11_A 53 RFGQTHVIASGPE--DAPPLVLLHGALFSSTMWYPNIADWSSKYRTYAVDIIGDKNKSIPENV----------------- 113 (306)
T ss_dssp TTEEEEEEEESCT--TSCEEEEECCTTTCGGGGTTTHHHHHHHSEEEEECCTTSSSSCEECSC-----------------
T ss_pred CCceEEEEeeCCC--CCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEecCCCCCCCCCCCCC-----------------
Confidence 4668999998853 578999999999999999999999988999999999999 88864322
Q ss_pred ccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCC
Q 013006 222 WGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIR 301 (451)
Q Consensus 222 w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~ 301 (451)
.++++++++|+.+++++++.++++|+||||||.+++.+|.++|++|+++|++++...... ..
T Consensus 114 --------------~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~----~~ 175 (306)
T 2r11_A 114 --------------SGTRTDYANWLLDVFDNLGIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLP----FH 175 (306)
T ss_dssp --------------CCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBTSC----CC
T ss_pred --------------CCCHHHHHHHHHHHHHhcCCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccccCc----cc
Confidence 179999999999999999999999999999999999999999999999999998653210 01
Q ss_pred chHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHH---HHHhhccChhHHHHHHHHHh
Q 013006 302 SPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFT---RILETTQHPAAAASFASIMF 378 (451)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 378 (451)
............ ......+..++..........+. ......... +..+ .
T Consensus 176 ~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~ 227 (306)
T 2r11_A 176 HDFYKYALGLTA----------------------SNGVETFLNWMMNDQNVLHPIFVKQFKAGVMWQDG-----SRNP-N 227 (306)
T ss_dssp HHHHHHHHTTTS----------------------TTHHHHHHHHHTTTCCCSCHHHHHHHHHHHHCCSS-----SCCC-C
T ss_pred HHHHHHHhHHHH----------------------HHHHHHHHHHhhCCccccccccccccHHHHHHHHh-----hhhh-h
Confidence 111111100000 00111111111111111101100 000000000 0000 0
Q ss_pred cCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHH-HHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 379 APQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQ-VKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 379 ~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~-l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
..............+.++++|+|+|+|++|.+++++...+ +.+.++++++++++++||++++|+|+++++.|
T Consensus 228 ~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i 300 (306)
T 2r11_A 228 PNADGFPYVFTDEELRSARVPILLLLGEHEVIYDPHSALHRASSFVPDIEAEVIKNAGHVLSMEQPTYVNERV 300 (306)
T ss_dssp CCTTSSSCBCCHHHHHTCCSCEEEEEETTCCSSCHHHHHHHHHHHSTTCEEEEETTCCTTHHHHSHHHHHHHH
T ss_pred hhccCCCCCCCHHHHhcCCCCEEEEEeCCCcccCHHHHHHHHHHHCCCCEEEEeCCCCCCCcccCHHHHHHHH
Confidence 0000000012234567889999999999999999988874 45578999999999999999999999999876
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-28 Score=234.14 Aligned_cols=234 Identities=14% Similarity=0.150 Sum_probs=154.8
Q ss_pred cceeeecCCeEEEEeecCCCC---CCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCC-CCCCCCCCCCCCCC
Q 013006 136 SCFWEWKPKFNVHYEKAGCEN---VNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQ-GMSLPDEDPTPRSK 210 (451)
Q Consensus 136 ~~~~~~~~g~~l~y~~~g~~~---~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~-G~S~~~~~~~~~~~ 210 (451)
...++..+|.+|+|...++.. +.+|+|||+||++.+...|..+++.|++ +|+|+++|+||| |.|+....
T Consensus 9 ~~~i~~~dG~~l~~~~~~p~~~~~~~~~~VvllHG~g~~~~~~~~~~~~L~~~G~~Vi~~D~rGh~G~S~~~~~------ 82 (305)
T 1tht_A 9 AHVLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSID------ 82 (305)
T ss_dssp EEEEEETTTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGGGGHHHHHHHHTTTCCEEEECCCBCC--------------
T ss_pred EEEEEcCCCCEEEEEEecCcccCCCCCCEEEEecCCccCchHHHHHHHHHHHCCCEEEEeeCCCCCCCCCCccc------
Confidence 345667799999999888642 2468999999999999999999999965 799999999999 99964322
Q ss_pred CCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh---CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEe
Q 013006 211 EGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV---IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLL 287 (451)
Q Consensus 211 ~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l---~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~ 287 (451)
.++++++++|+..+++.+ +.++++|+||||||.+|+.+|.+ | +|+++|++
T Consensus 83 -------------------------~~~~~~~~~D~~~~~~~l~~~~~~~~~lvGhSmGG~iA~~~A~~-~-~v~~lvl~ 135 (305)
T 1tht_A 83 -------------------------EFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISD-L-ELSFLITA 135 (305)
T ss_dssp -------------------------CCCHHHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHTTT-S-CCSEEEEE
T ss_pred -------------------------ceehHHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHhCc-c-CcCEEEEe
Confidence 178999999998888865 78899999999999999999998 7 89999998
Q ss_pred ccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccCh
Q 013006 288 NATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHP 367 (451)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (451)
++...+ ............ . ...... + ..... .....
T Consensus 136 ~~~~~~--------~~~~~~~~~~~~----------------~-~~~~~~--------~---~~~~~--------~~~~~ 171 (305)
T 1tht_A 136 VGVVNL--------RDTLEKALGFDY----------------L-SLPIDE--------L---PNDLD--------FEGHK 171 (305)
T ss_dssp SCCSCH--------HHHHHHHHSSCG----------------G-GSCGGG--------C---CSEEE--------ETTEE
T ss_pred cCchhH--------HHHHHHHhhhhh----------------h-hcchhh--------C---ccccc--------ccccc
Confidence 764210 000000000000 0 000000 0 00000 00000
Q ss_pred hHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHC--CCCcEEEeCCCCCCccccChHH
Q 013006 368 AAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQV--PEAPYYEISPAGHCPHDEVPEV 445 (451)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l--p~~~~~~i~~~gH~~~~e~p~~ 445 (451)
.....+........ .....+....+.++++|+|+|+|++|.++|++.++++++.+ +++++++++++||.++ |+|+.
T Consensus 172 ~~~~~~~~~~~~~~-~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~i~~~~~~l~~i~~agH~~~-e~p~~ 249 (305)
T 1tht_A 172 LGSEVFVRDCFEHH-WDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLG-ENLVV 249 (305)
T ss_dssp EEHHHHHHHHHHTT-CSSHHHHHHHHTTCCSCEEEEEETTCTTSCHHHHHHHHTTCTTCCEEEEEETTCCSCTT-SSHHH
T ss_pred cCHHHHHHHHHhcc-ccchhhHHHHHhhcCCCEEEEEeCCCCccCHHHHHHHHHhcCCCCcEEEEeCCCCCchh-hCchH
Confidence 00000000000000 01112334567789999999999999999999999999987 4689999999999996 89986
Q ss_pred HHh
Q 013006 446 CSL 448 (451)
Q Consensus 446 v~~ 448 (451)
+.+
T Consensus 250 ~~~ 252 (305)
T 1tht_A 250 LRN 252 (305)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.5e-29 Score=231.13 Aligned_cols=225 Identities=16% Similarity=0.191 Sum_probs=159.6
Q ss_pred cCCeEEEEeecCCCC--CCCCcEEEecCCCCC--hhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchh
Q 013006 142 KPKFNVHYEKAGCEN--VNSPPVLFLPGFGVG--SFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTE 216 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~--~~~p~VlllHG~~~~--~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~ 216 (451)
.+|.+|++..+++.+ .++|+|||+||++++ ...|..+++.|++ +|+|+++|+||||.|.....
T Consensus 8 ~~g~~l~~~~~~p~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~------------ 75 (251)
T 2wtm_A 8 CDGIKLNAYLDMPKNNPEKCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMYGHGKSDGKFE------------ 75 (251)
T ss_dssp ETTEEEEEEEECCTTCCSSEEEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCGG------------
T ss_pred cCCcEEEEEEEccCCCCCCCCEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecCCCCCCCCCccc------------
Confidence 589999998887753 345789999999999 8889999999964 79999999999999964211
Q ss_pred hhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhC----CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCC
Q 013006 217 EKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI----REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPF 292 (451)
Q Consensus 217 ~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~----~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~ 292 (451)
.++++++++|+.++++.+. +++++|+||||||.+++.+|.++|++|+++|++++...
T Consensus 76 -------------------~~~~~~~~~d~~~~~~~l~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 136 (251)
T 2wtm_A 76 -------------------DHTLFKWLTNILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAM 136 (251)
T ss_dssp -------------------GCCHHHHHHHHHHHHHHHTTCTTEEEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTT
T ss_pred -------------------cCCHHHHHHHHHHHHHHHHcCcccceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHH
Confidence 1689999999999999984 56899999999999999999999999999999987421
Q ss_pred CCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHH
Q 013006 293 WGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAAS 372 (451)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (451)
. ........ ... ....+. ........ +...... ..
T Consensus 137 ~--------~~~~~~~~-~~~-----------------~~~~~~-----------~~~~~~~~----~~~~~~~----~~ 171 (251)
T 2wtm_A 137 I--------PEIARTGE-LLG-----------------LKFDPE-----------NIPDELDA----WDGRKLK----GN 171 (251)
T ss_dssp H--------HHHHHHTE-ETT-----------------EECBTT-----------BCCSEEEE----TTTEEEE----TH
T ss_pred h--------HHHHhhhh-hcc-----------------ccCCch-----------hcchHHhh----hhccccc----hH
Confidence 0 00000000 000 000000 00000000 0000000 00
Q ss_pred HHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 373 FASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
+..... .. +....+.++++|+|+|+|++|.++|++.++++++.++++++++++++||++ .++|+++++.|
T Consensus 172 ~~~~~~----~~---~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~~~~~~~~~i 241 (251)
T 2wtm_A 172 YVRVAQ----TI---RVEDFVDKYTKPVLIVHGDQDEAVPYEASVAFSKQYKNCKLVTIPGDTHCY-DHHLELVTEAV 241 (251)
T ss_dssp HHHHHT----TC---CHHHHHHHCCSCEEEEEETTCSSSCHHHHHHHHHHSSSEEEEEETTCCTTC-TTTHHHHHHHH
T ss_pred HHHHHH----cc---CHHHHHHhcCCCEEEEEeCCCCCcChHHHHHHHHhCCCcEEEEECCCCccc-chhHHHHHHHH
Confidence 000000 11 122344568999999999999999999999999999999999999999999 99999998876
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=99.96 E-value=4.8e-30 Score=239.93 Aligned_cols=256 Identities=19% Similarity=0.259 Sum_probs=170.2
Q ss_pred cceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHh-hcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCc
Q 013006 136 SCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKD-LGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDS 214 (451)
Q Consensus 136 ~~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~-L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~ 214 (451)
..+++..+ .+++|...++ ++|+|||+||++++...|..++.. +.++|+|+++|+||||.|.....+
T Consensus 5 ~~~~~~~~-~~~~~~~~~~---~~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~--------- 71 (279)
T 4g9e_A 5 YHELETSH-GRIAVRESEG---EGAPLLMIHGNSSSGAIFAPQLEGEIGKKWRVIAPDLPGHGKSTDAIDP--------- 71 (279)
T ss_dssp EEEEEETT-EEEEEEECCC---CEEEEEEECCTTCCGGGGHHHHHSHHHHHEEEEEECCTTSTTSCCCSCH---------
T ss_pred EEEEEcCC-ceEEEEecCC---CCCeEEEECCCCCchhHHHHHHhHHHhcCCeEEeecCCCCCCCCCCCCc---------
Confidence 34455554 5899999885 578999999999999999999999 577899999999999999754321
Q ss_pred hhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCC
Q 013006 215 TEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWG 294 (451)
Q Consensus 215 ~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~ 294 (451)
...++++++++|+.+++++++.++++|+||||||.+++.+|.++|+ +.++|++++.+...
T Consensus 72 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~-~~~~vl~~~~~~~~ 131 (279)
T 4g9e_A 72 -------------------DRSYSMEGYADAMTEVMQQLGIADAVVFGWSLGGHIGIEMIARYPE-MRGLMITGTPPVAR 131 (279)
T ss_dssp -------------------HHHSSHHHHHHHHHHHHHHHTCCCCEEEEETHHHHHHHHHTTTCTT-CCEEEEESCCCCCG
T ss_pred -------------------ccCCCHHHHHHHHHHHHHHhCCCceEEEEECchHHHHHHHHhhCCc-ceeEEEecCCCCCC
Confidence 1137999999999999999999999999999999999999999998 99999998764211
Q ss_pred CCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHH
Q 013006 295 FSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFA 374 (451)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (451)
.............. .. ............+....+..... ...... ..... ......+.
T Consensus 132 -------~~~~~~~~~~~~~~---~~--------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~-~~~~~~~~ 189 (279)
T 4g9e_A 132 -------EEVGQGFKSGPDMA---LA--------GQEIFSERDVESYARSTCGEPFE--ASLLDI-VARTD-GRARRIMF 189 (279)
T ss_dssp -------GGHHHHBCCSTTGG---GG--------GCSCCCHHHHHHHHHHHHCSSCC--HHHHHH-HHHSC-HHHHHHHH
T ss_pred -------Cccchhhccchhhh---hc--------CcccccHHHHHHHHHhhccCccc--HHHHHH-HHhhh-ccchHHHH
Confidence 00000000000000 00 00000111122222222221111 111111 11111 11111111
Q ss_pred HHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHH-HHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 375 SIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVK-RQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~-~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
..+... .. .+....+.++++|+|+|+|++|.+++++..+.+. +.++++++++++++||++++++|+++++.|
T Consensus 190 ~~~~~~-~~---~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i 262 (279)
T 4g9e_A 190 EKFGSG-TG---GNQRDIVAEAQLPIAVVNGRDEPFVELDFVSKVKFGNLWEGKTHVIDNAGHAPFREAPAEFDAYL 262 (279)
T ss_dssp HHHHHT-CB---CCHHHHHHHCCSCEEEEEETTCSSBCHHHHTTCCCSSBGGGSCEEETTCCSCHHHHSHHHHHHHH
T ss_pred HHhhcc-CC---chHHHHHHhcCCCEEEEEcCCCcccchHHHHHHhhccCCCCeEEEECCCCcchHHhCHHHHHHHH
Confidence 111110 01 1223345668999999999999999999998887 778899999999999999999999999876
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.5e-29 Score=244.94 Aligned_cols=122 Identities=25% Similarity=0.286 Sum_probs=108.9
Q ss_pred ecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhh
Q 013006 141 WKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKN 219 (451)
Q Consensus 141 ~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~ 219 (451)
..+|.+++|...|+.++++|+|||+||++++...|..++..|++ +|+|+++|+||||.|..+....
T Consensus 9 ~~~g~~l~y~~~G~~~~~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~vi~~d~~g~g~s~~~~~~~------------- 75 (356)
T 2e3j_A 9 NCRGTRIHAVADSPPDQQGPLVVLLHGFPESWYSWRHQIPALAGAGYRVVAIDQRGYGRSSKYRVQK------------- 75 (356)
T ss_dssp EETTEEEEEEEECCTTCCSCEEEEECCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCCCCSGG-------------
T ss_pred ccCCeEEEEEEecCCCCCCCEEEEECCCCCcHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCccc-------------
Confidence 45799999999997655679999999999999999999999965 7999999999999997543210
Q ss_pred ccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 220 FLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 220 ~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
.++++++++|+.++++.++.++++++||||||.+++.+|.++|++|+++|++++..
T Consensus 76 ----------------~~~~~~~~~~~~~~~~~l~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 76 ----------------AYRIKELVGDVVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPF 131 (356)
T ss_dssp ----------------GGSHHHHHHHHHHHHHHTTCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCC
T ss_pred ----------------ccCHHHHHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcc
Confidence 27999999999999999999999999999999999999999999999999999753
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-29 Score=234.24 Aligned_cols=242 Identities=13% Similarity=0.050 Sum_probs=154.1
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELA 236 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 236 (451)
++|+|||+||++++...|..+++.|.+ +|+|+++|+||||.|...... .
T Consensus 11 ~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~------------------------------~ 60 (267)
T 3sty_A 11 VKKHFVLVHAAFHGAWCWYKIVALMRSSGHNVTALDLGASGINPKQALQ------------------------------I 60 (267)
T ss_dssp CCCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTCSCCGGG------------------------------C
T ss_pred CCCeEEEECCCCCCcchHHHHHHHHHhcCCeEEEeccccCCCCCCcCCc------------------------------c
Confidence 578999999999999999999999976 799999999999999765321 1
Q ss_pred cCHHHHHHHHHHHHHHh-CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhh----cCC
Q 013006 237 YSVDLWQDQVCYFIKEV-IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARI----LPW 311 (451)
Q Consensus 237 ~s~~~~a~dv~~ll~~l-~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~----~~~ 311 (451)
++++++++|+.++++++ ..++++|+||||||.+++.+|.++|++|+++|++++....... ......... ..|
T Consensus 61 ~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~---~~~~~~~~~~~~~~~~ 137 (267)
T 3sty_A 61 PNFSDYLSPLMEFMASLPANEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNI---DATTVCTKAGSAVLGQ 137 (267)
T ss_dssp CSHHHHHHHHHHHHHTSCTTSCEEEEEETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTB---CHHHHHHHHHHTTTTC
T ss_pred CCHHHHHHHHHHHHHhcCCCCCEEEEEEcHHHHHHHHHHHhChhhcceEEEecCCCCCCcc---hHHHHHHHhcccchhh
Confidence 79999999999999999 4899999999999999999999999999999999986421100 000000000 000
Q ss_pred CCCC-CChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHh
Q 013006 312 SGTF-PLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREAL 390 (451)
Q Consensus 312 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (451)
.... ......... ....... ...+...+.... .......... ...+.....+..+.. ....
T Consensus 138 ~~~~~~~~~~~~~~---~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~--------~~~~ 199 (267)
T 3sty_A 138 LDNCVTYENGPTNP---PTTLIAG----PKFLATNVYHLS--PIEDLALATA-LVRPLYLYLAEDISK--------EVVL 199 (267)
T ss_dssp TTCEEECTTCTTSC---CCEEECC----HHHHHHHTSTTS--CHHHHHHHHH-HCCCEECCCHHHHHH--------HCCC
T ss_pred hhhhhhhhhhhhcc---cchhhhh----HHHHHHhhcccC--CHHHHHHHHH-hhccchhHHHHHhhc--------chhc
Confidence 0000 000000000 0000000 011111111110 0111111111 111000000000000 0001
Q ss_pred hhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 391 SRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 391 ~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
......++|+++|+|++|.+++++..+++++.+|++++++++++||++++|+|+++++.|
T Consensus 200 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i 259 (267)
T 3sty_A 200 SSKRYGSVKRVFIVATENDALKKEFLKLMIEKNPPDEVKEIEGSDHVTMMSKPQQLFTTL 259 (267)
T ss_dssp CTTTGGGSCEEEEECCCSCHHHHHHHHHHHHHSCCSEEEECTTCCSCHHHHSHHHHHHHH
T ss_pred ccccccCCCEEEEEeCCCCccCHHHHHHHHHhCCCceEEEeCCCCccccccChHHHHHHH
Confidence 111112699999999999999999999999999999999999999999999999999876
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=99.96 E-value=5.1e-29 Score=251.97 Aligned_cols=256 Identities=16% Similarity=0.170 Sum_probs=176.3
Q ss_pred ecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhh
Q 013006 141 WKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKN 219 (451)
Q Consensus 141 ~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~ 219 (451)
..||.+|+|...| ++|+|||+||++++...|..++..| .++|+|+++|+||||.|+.+...
T Consensus 10 ~~dG~~l~y~~~G----~gp~VV~lHG~~~~~~~~~~l~~~La~~Gy~Vi~~D~rG~G~S~~~~~~-------------- 71 (456)
T 3vdx_A 10 NSTSIDLYYEDHG----TGVPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTG-------------- 71 (456)
T ss_dssp TTEEEEEEEEEES----SSEEEEEECCTTCCGGGGTTHHHHHHHHTEEEEEECCTTSTTSCCCSSC--------------
T ss_pred ccCCeEEEEEEeC----CCCEEEEECCCCCcHHHHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCC--------------
Confidence 4579999999998 4689999999999999999999999 56899999999999999754322
Q ss_pred ccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhC-CCccceEEEeccCCCCCCCCC
Q 013006 220 FLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACN-PHLVKGVTLLNATPFWGFSPN 298 (451)
Q Consensus 220 ~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~-P~~v~~lvl~~~~~~~~~~~~ 298 (451)
++++++++|+.++++.++.++++|+||||||.+++.+|+++ |++|+++|++++.........
T Consensus 72 -----------------~s~~~~a~dl~~~l~~l~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~~~~~~~ 134 (456)
T 3vdx_A 72 -----------------YDYDTFAADLNTVLETLDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTD 134 (456)
T ss_dssp -----------------CSHHHHHHHHHHHHHHHTCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCSCCBCCS
T ss_pred -----------------CCHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCccccccccc
Confidence 79999999999999999999999999999999999999887 999999999998653211110
Q ss_pred CCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCC----ChHHHHHHHHhhccChhHHHHHH
Q 013006 299 PIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHAT----NVDTVFTRILETTQHPAAAASFA 374 (451)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 374 (451)
.+............+...... .........+...+..... .......................
T Consensus 135 -----------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (456)
T 3vdx_A 135 -----------DNPDGAAPQEFFDGIVAAVKA--DRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAA 201 (456)
T ss_dssp -----------SCCSCSBCHHHHHHHHHHHHH--CHHHHHHHHHHHHTTTTTSBTTTBCHHHHHHHHHHHHTSCTTHHHH
T ss_pred -----------ccccccchHHHHHHHHHhhhc--cchHHHHHHHHHHhcccccccccccHHHHHHHhhhccccchhhhhh
Confidence 001111111222222221111 1112222333333322211 11122222222111111111111
Q ss_pred HHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChH-HHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 375 SIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPV-WGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~-~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
..... ..+....+.++++|+|+|+|++|.++|++ ..+.+.+.++++++++++++||+++.++|+++++.|
T Consensus 202 ~~~~~------~~d~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~l~~~~~~~~~~~i~gagH~~~~e~p~~v~~~I 272 (456)
T 3vdx_A 202 APTTW------YTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTAL 272 (456)
T ss_dssp GGGGT------TCCCTTTSTTCCSCCEEEEETTCSSSCGGGTHHHHHHHCTTSEEEEETTCCSCTTTTTHHHHHHHH
T ss_pred hhhhh------hhhHHHHhhhCCCCEEEEEeCCCCCcCHHHHHHHHHHHCCCceEEEeCCCCCcchhhCHHHHHHHH
Confidence 11000 12334456789999999999999999998 788889999999999999999999999999998876
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-29 Score=245.97 Aligned_cols=289 Identities=15% Similarity=0.149 Sum_probs=169.1
Q ss_pred CeEEEEeecCCCCC-CCCcEEEecCCCCChhc-------------HHHHH---Hhh-cCCceEEEEcCCCCCCCCCC---
Q 013006 144 KFNVHYEKAGCENV-NSPPVLFLPGFGVGSFH-------------YEKQL---KDL-GKDYRAWAIDFLGQGMSLPD--- 202 (451)
Q Consensus 144 g~~l~y~~~g~~~~-~~p~VlllHG~~~~~~~-------------~~~~~---~~L-~~~~~Vi~~D~rG~G~S~~~--- 202 (451)
|++|+|..+|+.++ .+|+|||+||+++++.. |+.++ ..| .++|+|+++|+||||.|...
T Consensus 26 ~~~i~y~~~g~~~~~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~G~S~G~~~g 105 (377)
T 3i1i_A 26 PVQMGYETYGTLNRERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVICTDNLCNVQVKNPHVI 105 (377)
T ss_dssp EEEEEEEEESCCCTTCCCEEEEECCTTCCSCCSSCSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSCTTSTTCC
T ss_pred eeeEEEEeecccCCCCCCEEEEeccccCcchhccccccccccccchhhhcCCCCccccccEEEEEecccccccccCCCcc
Confidence 67889999997543 35899999999999877 88887 555 56899999999999886410
Q ss_pred -CCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEE-EEEeCcchHHHHHHHHhCCCc
Q 013006 203 -EDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVY-VVGNSLGGFVAVYFAACNPHL 280 (451)
Q Consensus 203 -~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~-lvGhS~GG~val~~A~~~P~~ 280 (451)
..+.... +.....|+.. ...++++++++|+.+++++++.++++ |+||||||.+++.+|.++|++
T Consensus 106 ~~g~~~~~------p~~~~~~~~~--------~~~~~~~~~~~d~~~~l~~l~~~~~~ilvGhS~Gg~ia~~~a~~~p~~ 171 (377)
T 3i1i_A 106 TTGPKSIN------PKTGDEYAMD--------FPVFTFLDVARMQCELIKDMGIARLHAVMGPSAGGMIAQQWAVHYPHM 171 (377)
T ss_dssp CCSTTSBC------TTTSSBCGGG--------SCCCCHHHHHHHHHHHHHHTTCCCBSEEEEETHHHHHHHHHHHHCTTT
T ss_pred cCCCCCCC------CCCCCcccCC--------CCCCCHHHHHHHHHHHHHHcCCCcEeeEEeeCHhHHHHHHHHHHChHH
Confidence 0100000 0001112110 01379999999999999999999996 999999999999999999999
Q ss_pred cceEEE-eccCCCCCCCCCCCCc---hHHhhhcCCCCC-CC--ChHHHHHHHHHH-HHhcCChHHHHHHHHHHhhcCCCC
Q 013006 281 VKGVTL-LNATPFWGFSPNPIRS---PKLARILPWSGT-FP--LPASVRKLIEFI-WQKISDPESIAEVLKQVYADHATN 352 (451)
Q Consensus 281 v~~lvl-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 352 (451)
|+++|+ +++.+........... ........|... +. .+.......... ......+..+ ...+......
T Consensus 172 v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 247 (377)
T 3i1i_A 172 VERMIGVITNPQNPIITSVNVAQNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHFY----ETTYPRNSIE 247 (377)
T ss_dssp BSEEEEESCCSBCCHHHHHHTTHHHHHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHHHH----HHHSCCCSSC
T ss_pred HHHhcccCcCCCcCCchhhHHHHHHHHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHHHH----HHHhhhhhcc
Confidence 999999 7765320000000000 000000001000 00 111111111111 0011111111 1111110000
Q ss_pred ------------hHHHHHHHHhhccCh---hHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHH
Q 013006 353 ------------VDTVFTRILETTQHP---AAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGL 417 (451)
Q Consensus 353 ------------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~ 417 (451)
.+............. .........+..........+....+.++++|+|+|+|++|.+++++.++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~ 327 (377)
T 3i1i_A 248 VEPYEKVSSLTSFEKEINKLTYRSIELVDANSWMYTAKAVLLHDIAHGFSSLEEALSNVEANVLMIPCKQDLLQPSRYNY 327 (377)
T ss_dssp CGGGTCTTCCCHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHCBTTTTSSCHHHHHHTCCSEEEEECBTTCSSSCTHHHH
T ss_pred ccccccccchhHHHHHHHHHHhhhhcccCHHHHHHHHHHHhhcccccccCCHHHHHhhCCCCEEEEecCCccccCHHHHH
Confidence 111111111111111 11111111111100000012234456789999999999999999999999
Q ss_pred HHHHHC----CCCcEEEeCC-CCCCccccChHHHHhhh
Q 013006 418 QVKRQV----PEAPYYEISP-AGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 418 ~l~~~l----p~~~~~~i~~-~gH~~~~e~p~~v~~~I 450 (451)
++++.+ |+++++++++ +||++++|+|+++++.|
T Consensus 328 ~~~~~~~~~g~~~~~~~i~~~~gH~~~~e~p~~~~~~i 365 (377)
T 3i1i_A 328 KMVDLLQKQGKYAEVYEIESINGHMAGVFDIHLFEKKV 365 (377)
T ss_dssp HHHHHHHHTTCCEEECCBCCTTGGGHHHHCGGGTHHHH
T ss_pred HHHHHHHhcCCCceEEEcCCCCCCcchhcCHHHHHHHH
Confidence 999999 9999999998 99999999999999876
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-29 Score=231.47 Aligned_cols=232 Identities=17% Similarity=0.223 Sum_probs=163.7
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccc
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLW 222 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w 222 (451)
+|.+|+|...|+++ ++|+|||+||++++...|. ++..|.++|+|+++|+||||.|....
T Consensus 1 ~g~~l~y~~~g~~~-~~~~vv~~hG~~~~~~~~~-~~~~l~~g~~v~~~d~~g~g~s~~~~------------------- 59 (245)
T 3e0x_A 1 SNAMLHYVHVGNKK-SPNTLLFVHGSGCNLKIFG-ELEKYLEDYNCILLDLKGHGESKGQC------------------- 59 (245)
T ss_dssp CCCCCCEEEEECTT-CSCEEEEECCTTCCGGGGT-TGGGGCTTSEEEEECCTTSTTCCSCC-------------------
T ss_pred CCceeEEEecCCCC-CCCEEEEEeCCcccHHHHH-HHHHHHhCCEEEEecCCCCCCCCCCC-------------------
Confidence 36788999988642 5789999999999999999 88889999999999999999997321
Q ss_pred cCCCCCCccccccccCHHHHHHHHHHHH------HHhCCCCEEEEEeCcchHHHHHHHHh-CCCccceEEEeccCCCCCC
Q 013006 223 GFGDKAQPWASELAYSVDLWQDQVCYFI------KEVIREPVYVVGNSLGGFVAVYFAAC-NPHLVKGVTLLNATPFWGF 295 (451)
Q Consensus 223 ~~~~~~~~~~~~~~~s~~~~a~dv~~ll------~~l~~~~v~lvGhS~GG~val~~A~~-~P~~v~~lvl~~~~~~~~~ 295 (451)
.++++++++|+.+++ ++++ +++++|||+||.+++.+|.+ +|+ |+++|++++......
T Consensus 60 -------------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~ 123 (245)
T 3e0x_A 60 -------------PSTVYGYIDNVANFITNSEVTKHQK--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDK 123 (245)
T ss_dssp -------------CSSHHHHHHHHHHHHHHCTTTTTCS--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTT
T ss_pred -------------CcCHHHHHHHHHHHHHhhhhHhhcC--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCcccc
Confidence 179999999999999 8887 99999999999999999999 999 999999998653210
Q ss_pred CCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccC-hhHH-HHH
Q 013006 296 SPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQH-PAAA-ASF 373 (451)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~ 373 (451)
........+... ... ..... .... ................ +... ..+
T Consensus 124 ----~~~~~~~~~~~~--------------------~~~-~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (245)
T 3e0x_A 124 ----LDKDFMEKIYHN--------------------QLD-NNYLL---ECIG---GIDNPLSEKYFETLEKDPDIMINDL 172 (245)
T ss_dssp ----SCHHHHHHHHTT--------------------CCC-HHHHH---HHHT---CSCSHHHHHHHTTSCSSHHHHHHHH
T ss_pred ----ccHHHHHHHHHH--------------------HHH-hhcCc---cccc---ccchHHHHHHHHHHhcCcHHHHHHH
Confidence 001111111100 000 00000 0000 0011111111111111 1100 011
Q ss_pred HHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 374 ASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
.... ..+....+.++++|+++++|++|.+++++..+++.+.++++++++++++||+++.++|+++++.|
T Consensus 173 ~~~~--------~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i 241 (245)
T 3e0x_A 173 IACK--------LIDLVDNLKNIDIPVKAIVAKDELLTLVEYSEIIKKEVENSELKIFETGKHFLLVVNAKGVAEEI 241 (245)
T ss_dssp HHHH--------HCBCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSSSEEEEEESSCGGGHHHHTHHHHHHHH
T ss_pred HHhc--------cccHHHHHHhCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCceEEEeCCCCcceEEecHHHHHHHH
Confidence 1100 01223446678999999999999999999999999999999999999999999999999999876
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.6e-29 Score=233.37 Aligned_cols=252 Identities=18% Similarity=0.258 Sum_probs=170.5
Q ss_pred EEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCC
Q 013006 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFG 225 (451)
Q Consensus 146 ~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~ 225 (451)
+++|...|+ ..|+|||+||++++...|..+++.|+++|+|+++|+||||.|........
T Consensus 18 ~~~~~~~g~---~~~~vv~lHG~~~~~~~~~~~~~~l~~g~~v~~~d~~G~G~s~~~~~~~~------------------ 76 (282)
T 3qvm_A 18 RNNINITGG---GEKTVLLAHGFGCDQNMWRFMLPELEKQFTVIVFDYVGSGQSDLESFSTK------------------ 76 (282)
T ss_dssp HTTCEEEEC---SSCEEEEECCTTCCGGGGTTTHHHHHTTSEEEECCCTTSTTSCGGGCCTT------------------
T ss_pred hcceeecCC---CCCeEEEECCCCCCcchHHHHHHHHhcCceEEEEecCCCCCCCCCCCCcc------------------
Confidence 445566663 34899999999999999999999998899999999999999975432100
Q ss_pred CCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHH
Q 013006 226 DKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKL 305 (451)
Q Consensus 226 ~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~ 305 (451)
...+++++++|+.+++++++.++++|+||||||.+++.+|.++|++|+++|++++.+......
T Consensus 77 ---------~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~-------- 139 (282)
T 3qvm_A 77 ---------RYSSLEGYAKDVEEILVALDLVNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFP-------- 139 (282)
T ss_dssp ---------GGGSHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEET--------
T ss_pred ---------ccccHHHHHHHHHHHHHHcCCCceEEEEecccHHHHHHHHHhCchhhheEEEecCcchhccCc--------
Confidence 014999999999999999999999999999999999999999999999999999865321100
Q ss_pred hhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhc--cChhHHHHHHHHHhcCCCC
Q 013006 306 ARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETT--QHPAAAASFASIMFAPQGN 383 (451)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 383 (451)
..+...+ .......+...... ........+......... .......+.... ..+.....+......
T Consensus 140 ---~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 207 (282)
T 3qvm_A 140 ---PDYVGGF-ERDDLEELINLMDK---NYIGWANYLAPLVMGASH-SSELIGELSGSFCTTDPIVAKTFAKATFF---- 207 (282)
T ss_dssp ---TTEECSB-CHHHHHHHHHHHHH---CHHHHHHHHHHHHHCTTS-CHHHHHHHHHHHHHSCHHHHHHHHHHHHS----
T ss_pred ---hhhhchh-ccccHHHHHHHHhc---chhhHHHHHHhhccCCcc-chhhHHHHHHHHhcCCcHHHHHHHHHHhc----
Confidence 0111111 11112222211111 111222222222221111 112222111111 112222222222111
Q ss_pred CchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 384 LSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 384 ~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
.+....+.++++|+++|+|++|.+++++..+.+.+.++++++++++++||+++.++|+++++.|
T Consensus 208 ---~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i 271 (282)
T 3qvm_A 208 ---SDYRSLLEDISTPALIFQSAKDSLASPEVGQYMAENIPNSQLELIQAEGHCLHMTDAGLITPLL 271 (282)
T ss_dssp ---CBCGGGGGGCCSCEEEEEEEECTTCCHHHHHHHHHHSSSEEEEEEEEESSCHHHHCHHHHHHHH
T ss_pred ---ccHHHHHhcCCCCeEEEEeCCCCcCCHHHHHHHHHhCCCCcEEEecCCCCcccccCHHHHHHHH
Confidence 1223456778999999999999999999999999999999999999999999999999998876
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-28 Score=253.15 Aligned_cols=275 Identities=16% Similarity=0.227 Sum_probs=181.9
Q ss_pred CCccceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCC
Q 013006 133 PITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKE 211 (451)
Q Consensus 133 ~~~~~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~ 211 (451)
.+...+++..||.+++|...| ++|+|||+||++++...|..++..|++ ||+|+++|+||||.|..+....
T Consensus 236 ~~~~~~~~~~dg~~l~~~~~g----~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~D~~G~G~S~~~~~~~----- 306 (555)
T 3i28_A 236 DMSHGYVTVKPRVRLHFVELG----SGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIE----- 306 (555)
T ss_dssp GSEEEEEEEETTEEEEEEEEC----SSSEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTSCCCSCGG-----
T ss_pred ccceeEEEeCCCcEEEEEEcC----CCCEEEEEeCCCCchhHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCcc-----
Confidence 466788889999999999999 468999999999999999999999966 6999999999999997653211
Q ss_pred CCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 212 GDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 212 ~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
.++++++++|+.+++++++.++++++||||||.+++.+|.++|++|+++|++++..
T Consensus 307 ------------------------~~~~~~~~~d~~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 362 (555)
T 3i28_A 307 ------------------------EYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPF 362 (555)
T ss_dssp ------------------------GGSHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred ------------------------cccHHHHHHHHHHHHHHcCCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccCC
Confidence 27999999999999999999999999999999999999999999999999999754
Q ss_pred CCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCC---------------------
Q 013006 292 FWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHA--------------------- 350 (451)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------- 350 (451)
... .+. ........... .........................+...+....
T Consensus 363 ~~~---~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (555)
T 3i28_A 363 IPA---NPN-MSPLESIKANP----VFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPE 434 (555)
T ss_dssp CCC---CTT-SCHHHHHHTCG----GGHHHHHHHSTTHHHHHHHHCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCS
T ss_pred CCC---Ccc-cchHHHHhcCC----ccchhHHhhCCCchHHHHhhhHHHHHHHHhccccccccccccccccccccccCcc
Confidence 211 111 11111110000 0000000000000000000011112222211111
Q ss_pred ------CChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC
Q 013006 351 ------TNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP 424 (451)
Q Consensus 351 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp 424 (451)
.........+...............+ .... .....+....+.++++|+|+|+|++|.++|++..+.+++.+|
T Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~ 512 (555)
T 3i28_A 435 EPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWY-RNME-RNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIP 512 (555)
T ss_dssp SCCCCTTCCHHHHHHHHHHHTTTTTHHHHHTT-SCHH-HHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTCT
T ss_pred ccccccccCHHHHHHHHHHHhcccchhHHHHH-Hhcc-ccchhhccccccccccCEEEEEeCCCCCcCHHHHHHHHhhCC
Confidence 01112222222222222111111100 0000 000013344567899999999999999999999999999999
Q ss_pred CCcEEEeCCCCCCccccChHHHHhhh
Q 013006 425 EAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 425 ~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
++++++++++||++++|+|+++++.|
T Consensus 513 ~~~~~~~~~~gH~~~~e~p~~~~~~i 538 (555)
T 3i28_A 513 HLKRGHIEDCGHWTQMDKPTEVNQIL 538 (555)
T ss_dssp TCEEEEETTCCSCHHHHSHHHHHHHH
T ss_pred CceEEEeCCCCCCcchhCHHHHHHHH
Confidence 99999999999999999999998876
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-31 Score=253.39 Aligned_cols=272 Identities=15% Similarity=0.144 Sum_probs=167.8
Q ss_pred cCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhcc
Q 013006 142 KPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFL 221 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~ 221 (451)
.+|.+++|...| ++|+|||+||++++...|..++..|+++|+|+++|+||||.|..+.....
T Consensus 12 ~~g~~~~~~~~g----~~p~vv~lHG~~~~~~~~~~~~~~l~~g~~v~~~D~~G~G~s~~~~~~~~-------------- 73 (304)
T 3b12_A 12 VGDVTINCVVGG----SGPALLLLHGFPQNLHMWARVAPLLANEYTVVCADLRGYGGSSKPVGAPD-------------- 73 (304)
Confidence 378999999988 46899999999999999999999999899999999999999976431100
Q ss_pred ccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCC
Q 013006 222 WGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIR 301 (451)
Q Consensus 222 w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~ 301 (451)
...++++++++|+.+++++++.++++|+||||||.+++.+|.++|++|+++|++++.+..........
T Consensus 74 ------------~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 141 (304)
T 3b12_A 74 ------------HANYSFRAMASDQRELMRTLGFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEVDR 141 (304)
Confidence 01279999999999999999999999999999999999999999999999999998643211110000
Q ss_pred chHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHH-HHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcC
Q 013006 302 SPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAE-VLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAP 380 (451)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (451)
.. ......+ .....+.. +...+.. ......+.. .+..+........++....+......+.........+...
T Consensus 142 ~~-~~~~~~~-~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (304)
T 3b12_A 142 FV-ARAYWHW-YFLQQPAP---YPEKVIG-ADPDTFYEGCLFGWGATGADGFDPEQLEEYRKQWRDPAAIHGSCCDYRAG 215 (304)
Confidence 00 0000000 00000000 0000000 000001111 1111111111111111122211111111111111111100
Q ss_pred CCCCchh-HHhhhccCCCCCEEEEeeCCCC-CCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhhC
Q 013006 381 QGNLSFR-EALSRCQMNGVPICLIYGKEDP-WVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCLL 451 (451)
Q Consensus 381 ~~~~~~~-~~~~~l~~i~~PvLii~G~~D~-~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~Il 451 (451)
. ..+.. .....+.++++|+|+|+|++|. +.+....+.+.+..++++++++ ++||++++|+|+++++.|.
T Consensus 216 ~-~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~ 286 (304)
T 3b12_A 216 G-TIDFELDHGDLGRQVQCPALVFSGSAGLMHSLFEMQVVWAPRLANMRFASL-PGGHFFVDRFPDDTARILR 286 (304)
Confidence 0 00111 1111167889999999999995 4466777788888899999999 9999999999999988763
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-28 Score=240.58 Aligned_cols=284 Identities=13% Similarity=0.181 Sum_probs=173.1
Q ss_pred cCCeEEEEeecCCCCCC-CCcEEEecCCCCChhc---------HHHHHH---hh-cCCceEEEEcCCC-CCCCCCCCCCC
Q 013006 142 KPKFNVHYEKAGCENVN-SPPVLFLPGFGVGSFH---------YEKQLK---DL-GKDYRAWAIDFLG-QGMSLPDEDPT 206 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~~~-~p~VlllHG~~~~~~~---------~~~~~~---~L-~~~~~Vi~~D~rG-~G~S~~~~~~~ 206 (451)
.+|.+|+|...|+.++. +|+|||+||++++... |..++. .| +++|+|+++|+|| +|.|..+....
T Consensus 41 ~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~~~~~~~ 120 (377)
T 2b61_A 41 LSYINVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSIN 120 (377)
T ss_dssp ECSEEEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBC
T ss_pred ecceeEEEEecccccccCCCeEEEeCCCCCccccccccccchhhhhccCcccccccCCceEEEecCCCCCCCCCCCcccC
Confidence 46889999999975433 5899999999999998 998886 48 6789999999999 68886542211
Q ss_pred CCCCCCCchhhhhccccCCCCCCcccccc-ccCHHHHHHHHHHHHHHhCCCCEE-EEEeCcchHHHHHHHHhCCCccceE
Q 013006 207 PRSKEGDSTEEKNFLWGFGDKAQPWASEL-AYSVDLWQDQVCYFIKEVIREPVY-VVGNSLGGFVAVYFAACNPHLVKGV 284 (451)
Q Consensus 207 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~-~~s~~~~a~dv~~ll~~l~~~~v~-lvGhS~GG~val~~A~~~P~~v~~l 284 (451)
+.. ..+|.... .++++++++|+.+++++++.++++ |+||||||.+++.+|.++|++|+++
T Consensus 121 ~~~------------------g~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 182 (377)
T 2b61_A 121 PQT------------------GKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMDNI 182 (377)
T ss_dssp TTT------------------SSBCGGGCCCCCHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEE
T ss_pred ccc------------------cccccccCCcccHHHHHHHHHHHHHHcCCcceeEEEEEChhHHHHHHHHHHCchhhhee
Confidence 000 00010000 279999999999999999999998 9999999999999999999999999
Q ss_pred EEeccCCCCCCCCCCCCchH-H-hhhc---CCCC-CC---CChHHHHHHHHHHH-HhcCChHHHHHHHHHHhhcCCC---
Q 013006 285 TLLNATPFWGFSPNPIRSPK-L-ARIL---PWSG-TF---PLPASVRKLIEFIW-QKISDPESIAEVLKQVYADHAT--- 351 (451)
Q Consensus 285 vl~~~~~~~~~~~~~~~~~~-~-~~~~---~~~~-~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--- 351 (451)
|++++.+..... ...... . ..+. .|.. .+ ..+........... .....+..+ ...+.....
T Consensus 183 vl~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 256 (377)
T 2b61_A 183 VNLCSSIYFSAE--AIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQL----AKAFGRATKSDG 256 (377)
T ss_dssp EEESCCSSCCHH--HHHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHH----HHHTTTCBCTTC
T ss_pred EEeccCcccccc--chhHHHHHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHH----HHHhcccccccc
Confidence 999986421100 000000 0 0000 0100 00 00000000000000 000111111 111111111
Q ss_pred -------ChHHHHHH----HHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCCh----HHH
Q 013006 352 -------NVDTVFTR----ILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKP----VWG 416 (451)
Q Consensus 352 -------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~----~~~ 416 (451)
..+..... +.... .+.........+..........+....+.++++|+|+|+|++|.++|+ +..
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~ 335 (377)
T 2b61_A 257 SFWGDYFQVESYLSYQGKKFLERF-DANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSK 335 (377)
T ss_dssp CTTSCCBHHHHHHHHHHHHHHTTC-CHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHH
T ss_pred ccccchHHHHHHHHhhhhhhcccc-ChhHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCcccCCccchHHHH
Confidence 01111110 11111 111111111111111000001123456678999999999999999999 889
Q ss_pred HHHHHHCCCCcEEEeC-CCCCCccccChHHHHhhh
Q 013006 417 LQVKRQVPEAPYYEIS-PAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 417 ~~l~~~lp~~~~~~i~-~~gH~~~~e~p~~v~~~I 450 (451)
+.+++.+|++++++++ ++||++++|+|+++++.|
T Consensus 336 ~~l~~~~~~~~~~~i~~~~gH~~~~e~p~~~~~~i 370 (377)
T 2b61_A 336 QLLEQSGVDLHFYEFPSDYGHDAFLVDYDQFEKRI 370 (377)
T ss_dssp HHHHHTTCEEEEEEECCTTGGGHHHHCHHHHHHHH
T ss_pred HHHHhcCCCceEEEeCCCCCchhhhcCHHHHHHHH
Confidence 9999999999999999 999999999999999876
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.96 E-value=9.7e-29 Score=228.94 Aligned_cols=241 Identities=15% Similarity=0.079 Sum_probs=154.9
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELA 236 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 236 (451)
.+|+|||+||++++...|..+++.|++ +|+|+++|+||||.|..+... .
T Consensus 3 ~g~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~------------------------------~ 52 (258)
T 3dqz_A 3 RKHHFVLVHNAYHGAWIWYKLKPLLESAGHRVTAVELAASGIDPRPIQA------------------------------V 52 (258)
T ss_dssp CCCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSSCGGG------------------------------C
T ss_pred CCCcEEEECCCCCccccHHHHHHHHHhCCCEEEEecCCCCcCCCCCCCc------------------------------c
Confidence 358999999999999999999999976 699999999999999754221 2
Q ss_pred cCHHHHHHHHHHHHHHhCC-CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhc----CC
Q 013006 237 YSVDLWQDQVCYFIKEVIR-EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARIL----PW 311 (451)
Q Consensus 237 ~s~~~~a~dv~~ll~~l~~-~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~----~~ 311 (451)
++++++++|+.+++++++. ++++|+||||||.+++.+|.++|++|+++|++++....... .......... .|
T Consensus 53 ~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~---~~~~~~~~~~~~~~~~ 129 (258)
T 3dqz_A 53 ETVDEYSKPLIETLKSLPENEEVILVGFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTH---VPSHVLDKYMEMPGGL 129 (258)
T ss_dssp CSHHHHHHHHHHHHHTSCTTCCEEEEEETTHHHHHHHHHTTCGGGEEEEEEESCCCCCSSS---CTTHHHHHHHTSTTCC
T ss_pred ccHHHhHHHHHHHHHHhcccCceEEEEeChhHHHHHHHHHhChHhhcEEEEecCCCCCCCC---cchHHHHHhcccchhh
Confidence 7999999999999999998 99999999999999999999999999999999985321111 0011111110 11
Q ss_pred CCCCCCh-HHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHh
Q 013006 312 SGTFPLP-ASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREAL 390 (451)
Q Consensus 312 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (451)
....... ..... ........ ...+...+.... ................. +...+... ...
T Consensus 130 ~~~~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~---~~~~~~~~-------~~~ 190 (258)
T 3dqz_A 130 GDCEFSSHETRNG---TMSLLKMG----PKFMKARLYQNC--PIEDYELAKMLHRQGSF---FTEDLSKK-------EKF 190 (258)
T ss_dssp TTCEEEEEEETTE---EEEEEECC----HHHHHHHTSTTS--CHHHHHHHHHHCCCEEC---CHHHHHTS-------CCC
T ss_pred hhcccchhhhhcc---Chhhhhhh----HHHHHHHhhccC--CHHHHHHHHHhccCCch---hhhhhhcc-------ccc
Confidence 1000000 00000 00000000 011111111110 01111111111111000 00000000 000
Q ss_pred hhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 391 SRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 391 ~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
......++|+++|+|++|.++|++..+.+++.+|++++++++++||++++|+|+++++.|
T Consensus 191 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i 250 (258)
T 3dqz_A 191 SEEGYGSVQRVYVMSSEDKAIPCDFIRWMIDNFNVSKVYEIDGGDHMVMLSKPQKLFDSL 250 (258)
T ss_dssp CTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHSCCSCEEEETTCCSCHHHHSHHHHHHHH
T ss_pred cccccccCCEEEEECCCCeeeCHHHHHHHHHhCCcccEEEcCCCCCchhhcChHHHHHHH
Confidence 111123789999999999999999999999999999999999999999999999999876
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-28 Score=229.70 Aligned_cols=240 Identities=17% Similarity=0.223 Sum_probs=143.6
Q ss_pred ecCCCCCCCCcEEEecCCCCChhcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCC
Q 013006 151 KAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQ 229 (451)
Q Consensus 151 ~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 229 (451)
.+|+.+..+|+|||+||++++...|..+++.|+ ++|+|+++|+||||.|.....
T Consensus 8 ~~g~~~~~~~~vvllHG~~~~~~~w~~~~~~L~~~~~~vi~~Dl~GhG~S~~~~~------------------------- 62 (264)
T 1r3d_A 8 HFAKPTARTPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHGTNPERHC------------------------- 62 (264)
T ss_dssp ESSCCBTTBCEEEEECCTTCCGGGGHHHHHHHTTSSCEEEEECCTTCSSCC-----------------------------
T ss_pred ccCCCCCCCCcEEEEcCCCCCHHHHHHHHHHhcccCceEEEecCCCCCCCCCCCc-------------------------
Confidence 445433234899999999999999999999998 789999999999999974321
Q ss_pred ccccccccCHHHHHHHHHHHHHHhCCCC--EEEEEeCcchHHHHH---HHHhCCCccceEEEeccCCCCCCCCCCCCchH
Q 013006 230 PWASELAYSVDLWQDQVCYFIKEVIREP--VYVVGNSLGGFVAVY---FAACNPHLVKGVTLLNATPFWGFSPNPIRSPK 304 (451)
Q Consensus 230 ~~~~~~~~s~~~~a~dv~~ll~~l~~~~--v~lvGhS~GG~val~---~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~ 304 (451)
++++++++|+.+++++++.++ ++||||||||.+++. +|.++|++|+++|++++.+. .. ...
T Consensus 63 -------~~~~~~a~~l~~~l~~l~~~~~p~~lvGhSmGG~va~~~~~~a~~~p~~v~~lvl~~~~~~--~~-----~~~ 128 (264)
T 1r3d_A 63 -------DNFAEAVEMIEQTVQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFG--LQ-----ENE 128 (264)
T ss_dssp ----------CHHHHHHHHHHHTTCCTTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCC--CC-----SHH
T ss_pred -------cCHHHHHHHHHHHHHHhCcCCCceEEEEECHhHHHHHHHHHHHhhCccccceEEEecCCCC--CC-----Chh
Confidence 578899999999999999877 999999999999999 88899999999999987431 00 000
Q ss_pred HhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcC--CCChHHHHHHHHhhccChhHHHHHHHHHhcCCC
Q 013006 305 LARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADH--ATNVDTVFTRILETTQHPAAAASFASIMFAPQG 382 (451)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (451)
.... .. .........+ .. . .....+..++... ..........+......... ..+........
T Consensus 129 ~~~~-~~-------~~~~~~~~~~-~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~- 193 (264)
T 1r3d_A 129 EKAA-RW-------QHDQQWAQRF-SQ-Q---PIEHVLSDWYQQAVFSSLNHEQRQTLIAQRSANLG-SSVAHMLLATS- 193 (264)
T ss_dssp HHHH-HH-------HHHHHHHHHH-HH-S---CHHHHHHHHTTSGGGTTCCHHHHHHHHHHHTTSCH-HHHHHHHHHTC-
T ss_pred hhhh-hh-------cccHHHHHHh-cc-c---cHHHHHHHHhhhhhhhccCHHHHHHHHHHHhhcch-HHHHHHHHhhh-
Confidence 0000 00 0000000000 00 0 0111111211100 00011111111111111000 11111111100
Q ss_pred CCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 383 NLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 383 ~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
.....+....+.++++|+|+|+|++|..++ .+.+.++ .++++++++||++++|+|+++++.|
T Consensus 194 ~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i 255 (264)
T 1r3d_A 194 LAKQPYLLPALQALKLPIHYVCGEQDSKFQ-----QLAESSG-LSYSQVAQAGHNVHHEQPQAFAKIV 255 (264)
T ss_dssp GGGCCCCHHHHHTCSSCEEEEEETTCHHHH-----HHHHHHC-SEEEEETTCCSCHHHHCHHHHHHHH
T ss_pred hccCccHHHHHHhcCCCEEEEEECCCchHH-----HHHHHhC-CcEEEcCCCCCchhhcCHHHHHHHH
Confidence 000012234456789999999999997542 2333333 6799999999999999999999876
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-28 Score=232.08 Aligned_cols=218 Identities=18% Similarity=0.186 Sum_probs=147.7
Q ss_pred CCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccccc
Q 013006 159 SPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAY 237 (451)
Q Consensus 159 ~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 237 (451)
++.|||+||++++...|..+++.|++ ||+|+++|+||||.|..... .+
T Consensus 51 ~~~VlllHG~~~s~~~~~~la~~La~~Gy~Via~Dl~GhG~S~~~~~-------------------------------~~ 99 (281)
T 4fbl_A 51 RIGVLVSHGFTGSPQSMRFLAEGFARAGYTVATPRLTGHGTTPAEMA-------------------------------AS 99 (281)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCCTTSSSCHHHHH-------------------------------TC
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCcccc-------------------------------CC
Confidence 45699999999999999999999965 79999999999999952211 26
Q ss_pred CHHHHHHHHHHHHHHh--CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCC
Q 013006 238 SVDLWQDQVCYFIKEV--IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTF 315 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l--~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (451)
+++++++|+.++++.+ ..++++|+||||||.+++.+|.++|++|+++|++++..... .+...... +....
T Consensus 100 ~~~~~~~d~~~~~~~l~~~~~~v~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~-------~~~~~~~~-~~~~~ 171 (281)
T 4fbl_A 100 TASDWTADIVAAMRWLEERCDVLFMTGLSMGGALTVWAAGQFPERFAGIMPINAALRME-------SPDLAALA-FNPDA 171 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHCSEEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCSCCC-------CHHHHHHH-TCTTC
T ss_pred CHHHHHHHHHHHHHHHHhCCCeEEEEEECcchHHHHHHHHhCchhhhhhhcccchhccc-------chhhHHHH-HhHhh
Confidence 8999999999999988 57899999999999999999999999999999999853210 11111100 00000
Q ss_pred CChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccC
Q 013006 316 PLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQM 395 (451)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 395 (451)
.. .. ...... +. .......... .........+.... ......+.+
T Consensus 172 ~~--~~--------~~~~~~--~~---~~~~~~~~~~-----------~~~~~~~~~~~~~~---------~~~~~~l~~ 216 (281)
T 4fbl_A 172 PA--EL--------PGIGSD--IK---AEGVKELAYP-----------VTPVPAIKHLITIG---------AVAEMLLPR 216 (281)
T ss_dssp CS--EE--------ECCCCC--CS---STTCCCCCCS-----------EEEGGGHHHHHHHH---------HHHHHHGGG
T ss_pred HH--hh--------hcchhh--hh---hHHHHHhhhc-----------cCchHHHHHHHHhh---------hhccccccc
Confidence 00 00 000000 00 0000000000 00000000011100 122344678
Q ss_pred CCCCEEEEeeCCCCCCChHHHHHHHHHCCCC--cEEEeCCCCCCccccC-hHHHHhhh
Q 013006 396 NGVPICLIYGKEDPWVKPVWGLQVKRQVPEA--PYYEISPAGHCPHDEV-PEVCSLCL 450 (451)
Q Consensus 396 i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~--~~~~i~~~gH~~~~e~-p~~v~~~I 450 (451)
+++|+|+|+|++|.++|++.++.+.+.+++. ++++++++||++++|. |+++++.|
T Consensus 217 i~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~~~~l~~~~~~gH~~~~e~~~e~v~~~i 274 (281)
T 4fbl_A 217 VKCPALIIQSREDHVVPPHNGELIYNGIGSTEKELLWLENSYHVATLDNDKELILERS 274 (281)
T ss_dssp CCSCEEEEEESSCSSSCTHHHHHHHHHCCCSSEEEEEESSCCSCGGGSTTHHHHHHHH
T ss_pred cCCCEEEEEeCCCCCcCHHHHHHHHHhCCCCCcEEEEECCCCCcCccccCHHHHHHHH
Confidence 9999999999999999999999999998654 7889999999998874 88888765
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-27 Score=233.11 Aligned_cols=288 Identities=13% Similarity=0.092 Sum_probs=170.9
Q ss_pred cCCeEEEEeecCCCCC-CCCcEEEecCCCCChh-------------cHHHHHH---hh-cCCceEEEEcCCC--CCCCCC
Q 013006 142 KPKFNVHYEKAGCENV-NSPPVLFLPGFGVGSF-------------HYEKQLK---DL-GKDYRAWAIDFLG--QGMSLP 201 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~~-~~p~VlllHG~~~~~~-------------~~~~~~~---~L-~~~~~Vi~~D~rG--~G~S~~ 201 (451)
.+|.+++|...|++++ .+|+|||+||++++.. .|..++. .| +++|+|+++|+|| +|.|..
T Consensus 28 ~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~vi~~D~~G~~~G~s~~ 107 (366)
T 2pl5_A 28 LSPVVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGP 107 (366)
T ss_dssp ESSEEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSST
T ss_pred ccCceeeEEeccCcCCCCCceEEEecccCCcccccccccccccccchHHhhcCCcccccccccEEEEecCCCcccCCCCC
Confidence 4678999999997532 3689999999999988 7888884 44 6789999999999 898864
Q ss_pred CCCCCCCCCCCCchhhhhccccCCCCCCccccc-cccCHHHHHHHHHHHHHHhCCCCE-EEEEeCcchHHHHHHHHhCCC
Q 013006 202 DEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASE-LAYSVDLWQDQVCYFIKEVIREPV-YVVGNSLGGFVAVYFAACNPH 279 (451)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~-~~~s~~~~a~dv~~ll~~l~~~~v-~lvGhS~GG~val~~A~~~P~ 279 (451)
...... + ..+|... ..++++++++|+.+++++++.+++ +|+||||||.+++.+|.++|+
T Consensus 108 ~~~~~~--------------~-----~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~ 168 (366)
T 2pl5_A 108 LSIHPE--------------T-----STPYGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPN 168 (366)
T ss_dssp TSBCTT--------------T-----SSBCGGGSCCCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHHHSTT
T ss_pred CCCCCC--------------C-----CccccCCCCcccHHHHHHHHHHHHHHcCCceEEEEEEeCccHHHHHHHHHhCcH
Confidence 321100 0 0000000 027999999999999999999999 899999999999999999999
Q ss_pred ccceEEEeccCCCCCCCCCCCCchHHh----hhcCCCC-CC--CChHHHHHHHHHHHH-hcCChHHHHHHHHHHhhcC-C
Q 013006 280 LVKGVTLLNATPFWGFSPNPIRSPKLA----RILPWSG-TF--PLPASVRKLIEFIWQ-KISDPESIAEVLKQVYADH-A 350 (451)
Q Consensus 280 ~v~~lvl~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~ 350 (451)
+|+++|++++.+........ ...... ....|.. .+ ..+.....+...+.. ....+..+...+...+... .
T Consensus 169 ~v~~lvl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (366)
T 2pl5_A 169 SLSNCIVMASTAEHSAMQIA-FNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNI 247 (366)
T ss_dssp SEEEEEEESCCSBCCHHHHH-HHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCT
T ss_pred hhhheeEeccCccCCCccch-hhHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhcccc
Confidence 99999999986431100000 000000 0000000 00 011111111111100 0111111111111111100 0
Q ss_pred CChHHHHHHHHhh----c---cChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHC
Q 013006 351 TNVDTVFTRILET----T---QHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQV 423 (451)
Q Consensus 351 ~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l 423 (451)
.........+... . ............+.... .....+....+.++++|+|+|+|++|.++|++.++++.+.+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~ 326 (366)
T 2pl5_A 248 LSTDFAVGSYLIYQGESFVDRFDANSYIYVTKALDHYS-LGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSL 326 (366)
T ss_dssp TTTTTTSCGGGGSTTCCSSSCCCHHHHHHHHHHHHHCB-CCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHH
T ss_pred cchhhhHHHHHHHHHHhhhcccChhHHHHHHhhhhhhc-cccccchhhhhccCCCCEEEEecCCCcccCHHHHHHHHHHh
Confidence 0000000000000 0 00111111111111110 00111344567889999999999999999999999999999
Q ss_pred C----CCcEEEe-CCCCCCccccChHHHHhhh
Q 013006 424 P----EAPYYEI-SPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 424 p----~~~~~~i-~~~gH~~~~e~p~~v~~~I 450 (451)
+ +++++++ +++||+++.|+|+++++.|
T Consensus 327 ~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i 358 (366)
T 2pl5_A 327 EAADKRVFYVELQSGEGHDSFLLKNPKQIEIL 358 (366)
T ss_dssp HHTTCCEEEEEECCCBSSGGGGSCCHHHHHHH
T ss_pred hhcccCeEEEEeCCCCCcchhhcChhHHHHHH
Confidence 9 8899999 8999999999999999876
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6.8e-28 Score=238.73 Aligned_cols=277 Identities=15% Similarity=0.156 Sum_probs=174.1
Q ss_pred eeecCCeEEEEeecCCCC-------CCCCcEEEecCCCCChhcHHHHHHhhc----C-Cc---eEEEEcCCCCCCCCCCC
Q 013006 139 WEWKPKFNVHYEKAGCEN-------VNSPPVLFLPGFGVGSFHYEKQLKDLG----K-DY---RAWAIDFLGQGMSLPDE 203 (451)
Q Consensus 139 ~~~~~g~~l~y~~~g~~~-------~~~p~VlllHG~~~~~~~~~~~~~~L~----~-~~---~Vi~~D~rG~G~S~~~~ 203 (451)
+...||.+|+|..+|+.+ ...|+|||+||++++...|..++..|+ + || +|+++|+||||.|..+.
T Consensus 25 ~~~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~~~~~G~~~~~vi~~D~~G~G~S~~~~ 104 (398)
T 2y6u_A 25 LCATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSKVVWEYYLPRLVAADAEGNYAIDKVLLIDQVNHGDSAVRN 104 (398)
T ss_dssp SSTTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCCGGGGGGGGGGSCCCBTTTTEEEEEEEEECCTTSHHHHHHT
T ss_pred ccCCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCcHHHHHHHHHHHHHhhhhcCcceeEEEEEcCCCCCCCCCCC
Confidence 335689999999998754 123799999999999999999999997 2 57 99999999999997532
Q ss_pred CCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhC----CCC--EEEEEeCcchHHHHHHHHhC
Q 013006 204 DPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI----REP--VYVVGNSLGGFVAVYFAACN 277 (451)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~----~~~--v~lvGhS~GG~val~~A~~~ 277 (451)
.... ...++++++++|+.++++.+. ..+ ++|+||||||.+++.+|.++
T Consensus 105 ~~~~--------------------------~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~ 158 (398)
T 2y6u_A 105 RGRL--------------------------GTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQ 158 (398)
T ss_dssp TTTB--------------------------CSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHC
T ss_pred cccc--------------------------CCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhC
Confidence 2100 002799999999999999854 444 99999999999999999999
Q ss_pred CCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHH
Q 013006 278 PHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVF 357 (451)
Q Consensus 278 P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (451)
|++|+++|++++......... ...+.. ..............+.......+.........+...... ........
T Consensus 159 p~~v~~lvl~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 232 (398)
T 2y6u_A 159 PNLFHLLILIEPVVITRKAIG-AGRPGL----PPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFF-TNAHSQIL 232 (398)
T ss_dssp TTSCSEEEEESCCCSCCCCCS-CCCTTC----CTTCCCCCHHHHHHHHHTCCCEESSHHHHHHHHHHTSTT-TTSCHHHH
T ss_pred chheeEEEEeccccccccccc-cccccc----cccccccchhhHHHhhhhccccCCCHHHHHHHhhcCccc-ccCCHHHH
Confidence 999999999998653211000 000000 000000011111111110000011111122222111000 01111222
Q ss_pred HHHHhhcc-C--------------hhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHH
Q 013006 358 TRILETTQ-H--------------PAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQ 422 (451)
Q Consensus 358 ~~~~~~~~-~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~ 422 (451)
..+..... . ......+..+ ........+....+.++++|+|+|+|++|.++|++..+.+.+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~~~~~~~~l~~~ 309 (398)
T 2y6u_A 233 QNIIDFERTKASGDDEDGGPVRTKMEQAQNLLCY---MNMQTFAPFLISNVKFVRKRTIHIVGARSNWCPPQNQLFLQKT 309 (398)
T ss_dssp HHHHHHHEEC--------CCEEESSCHHHHHHTT---SCGGGTHHHHHHHGGGCCSEEEEEEETTCCSSCHHHHHHHHHH
T ss_pred HHHHHhcCccccccccCCCceEecCCchhhhhhh---cccccchHHHHHhccccCCCEEEEEcCCCCCCCHHHHHHHHHh
Confidence 22221100 0 0000000000 0000012234456788999999999999999999999999999
Q ss_pred CCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 423 VPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 423 lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
+|++++++++++||++++|+|+++++.|
T Consensus 310 ~~~~~~~~~~~~gH~~~~e~p~~~~~~i 337 (398)
T 2y6u_A 310 LQNYHLDVIPGGSHLVNVEAPDLVIERI 337 (398)
T ss_dssp CSSEEEEEETTCCTTHHHHSHHHHHHHH
T ss_pred CCCceEEEeCCCCccchhcCHHHHHHHH
Confidence 9999999999999999999999998876
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-27 Score=228.33 Aligned_cols=112 Identities=21% Similarity=0.339 Sum_probs=98.9
Q ss_pred eEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC--CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccc
Q 013006 145 FNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK--DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLW 222 (451)
Q Consensus 145 ~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w 222 (451)
.+++|...|. ++|+|||+||++.+...|..+++.|++ +|+|+++|+||||.|......
T Consensus 27 ~~~~~~~~g~---~~p~lvllHG~~~~~~~w~~~~~~L~~~~~~~via~Dl~GhG~S~~~~~~----------------- 86 (316)
T 3c5v_A 27 DTFRVYKSGS---EGPVLLLLHGGGHSALSWAVFTAAIISRVQCRIVALDLRSHGETKVKNPE----------------- 86 (316)
T ss_dssp EEEEEEEECS---SSCEEEEECCTTCCGGGGHHHHHHHHTTBCCEEEEECCTTSTTCBCSCTT-----------------
T ss_pred EEEEEEecCC---CCcEEEEECCCCcccccHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCcc-----------------
Confidence 5788888874 468999999999999999999999988 899999999999999753221
Q ss_pred cCCCCCCccccccccCHHHHHHHHHHHHHHh--CC-CCEEEEEeCcchHHHHHHHHh--CCCccceEEEeccC
Q 013006 223 GFGDKAQPWASELAYSVDLWQDQVCYFIKEV--IR-EPVYVVGNSLGGFVAVYFAAC--NPHLVKGVTLLNAT 290 (451)
Q Consensus 223 ~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l--~~-~~v~lvGhS~GG~val~~A~~--~P~~v~~lvl~~~~ 290 (451)
.|+++++++|+.++++++ +. ++++||||||||++|+.+|.+ +|+ |+++|++++.
T Consensus 87 -------------~~~~~~~a~dl~~~l~~l~~~~~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~~ 145 (316)
T 3c5v_A 87 -------------DLSAETMAKDVGNVVEAMYGDLPPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDVV 145 (316)
T ss_dssp -------------CCCHHHHHHHHHHHHHHHHTTCCCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESCC
T ss_pred -------------ccCHHHHHHHHHHHHHHHhccCCCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEccc
Confidence 179999999999999999 66 789999999999999999996 576 9999999864
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.4e-27 Score=230.99 Aligned_cols=297 Identities=13% Similarity=0.104 Sum_probs=174.6
Q ss_pred CCCccceeeecCCeEEEEeecCCCC------CCCCcEEEecCCCCChhcHHHHHH------hhcC-CceEEEEcCCCCCC
Q 013006 132 APITSCFWEWKPKFNVHYEKAGCEN------VNSPPVLFLPGFGVGSFHYEKQLK------DLGK-DYRAWAIDFLGQGM 198 (451)
Q Consensus 132 ~~~~~~~~~~~~g~~l~y~~~g~~~------~~~p~VlllHG~~~~~~~~~~~~~------~L~~-~~~Vi~~D~rG~G~ 198 (451)
.+.....++..||.+++|....+.. .++|+|||+||++++...|..++. .|++ ||+|+++|+||||.
T Consensus 25 ~~~~~~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~~~~~~~~~~~~~a~~l~~~G~~vi~~D~~G~G~ 104 (377)
T 1k8q_A 25 YPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTW 104 (377)
T ss_dssp CCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTSTT
T ss_pred CCceEEEeEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCchhhhhcCCCcccHHHHHHHCCCCEEEecCCCCCC
Confidence 3455667778899999998875432 257899999999999999877655 7755 69999999999999
Q ss_pred CCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHH-HHHHHHH----HhCCCCEEEEEeCcchHHHHHH
Q 013006 199 SLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQD-QVCYFIK----EVIREPVYVVGNSLGGFVAVYF 273 (451)
Q Consensus 199 S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~-dv~~ll~----~l~~~~v~lvGhS~GG~val~~ 273 (451)
|.......+ ....+| .++++++++ |+.++++ +++.++++++||||||.+++.+
T Consensus 105 S~~~~~~~~---------~~~~~~-------------~~~~~~~~~~D~~~~i~~~~~~~~~~~~~lvG~S~Gg~ia~~~ 162 (377)
T 1k8q_A 105 ARRNLYYSP---------DSVEFW-------------AFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIA 162 (377)
T ss_dssp SCEESSSCT---------TSTTTT-------------CCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHH
T ss_pred CCCCCCCCC---------Cccccc-------------CccHHHHHhhhHHHHHHHHHHhcCcCceEEEEechhhHHHHHH
Confidence 975321100 000111 268888888 7777654 5788999999999999999999
Q ss_pred HHhCCC---ccceEEEeccCCCCCCCCCCCCc------hHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHH
Q 013006 274 AACNPH---LVKGVTLLNATPFWGFSPNPIRS------PKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQ 344 (451)
Q Consensus 274 A~~~P~---~v~~lvl~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (451)
|.++|+ +|+++|++++.........+... ..+..........+.......+.................+..
T Consensus 163 a~~~p~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (377)
T 1k8q_A 163 FSTNPKLAKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFI 242 (377)
T ss_dssp HHHCHHHHTTEEEEEEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHH
T ss_pred HhcCchhhhhhhEEEEeCCchhcccchhHHHHHHhhccHHHHhhcCccccCcHHHHHHHHHHHhhCCccHHHHHHHHHHH
Confidence 999998 89999999987543222111100 001111111111111111111111110000001111111111
Q ss_pred HhhcCCCC-hHHHHHHHHhhccChhHHHHHH---HHHhc-CCCCCch------hH-------HhhhccCCCCCEEEEeeC
Q 013006 345 VYADHATN-VDTVFTRILETTQHPAAAASFA---SIMFA-PQGNLSF------RE-------ALSRCQMNGVPICLIYGK 406 (451)
Q Consensus 345 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~------~~-------~~~~l~~i~~PvLii~G~ 406 (451)
........ .......+............+. ..... ....+++ .. ....+.++++|+|+|+|+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~ 322 (377)
T 1k8q_A 243 ICGFDTMNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGG 322 (377)
T ss_dssp HHCCCGGGSCGGGHHHHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEET
T ss_pred hcCCCcccCCHHHHHHHhccCCCCccHHHHHHHHHHHhcCCeeeccCCcchhhHHHcCCCCCcccCHhhCCCCEEEEEeC
Confidence 11111000 0111111111111111001111 10000 0001100 00 112367889999999999
Q ss_pred CCCCCChHHHHHHHHHCCCCc-EEEeCCCCCCccc---cChHHHHhhh
Q 013006 407 EDPWVKPVWGLQVKRQVPEAP-YYEISPAGHCPHD---EVPEVCSLCL 450 (451)
Q Consensus 407 ~D~~v~~~~~~~l~~~lp~~~-~~~i~~~gH~~~~---e~p~~v~~~I 450 (451)
+|.++|++.++++++.+++++ +++++++||++++ ++|+++++.|
T Consensus 323 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i 370 (377)
T 1k8q_A 323 NDLLADPHDVDLLLSKLPNLIYHRKIPPYNHLDFIWAMDAPQAVYNEI 370 (377)
T ss_dssp TCSSSCHHHHHHHHTTCTTEEEEEEETTCCTTHHHHCTTHHHHTHHHH
T ss_pred CCcccCHHHHHHHHHhCcCcccEEecCCCCceEEEecCCcHHHHHHHH
Confidence 999999999999999999987 9999999999996 8999988876
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.4e-28 Score=226.42 Aligned_cols=230 Identities=18% Similarity=0.164 Sum_probs=166.1
Q ss_pred ceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCC--hhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013006 137 CFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVG--SFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGD 213 (451)
Q Consensus 137 ~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~--~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~ 213 (451)
..+...+|.+|+|..+++.+++.|+|||+||++++ ...|..++..|++ ||.|+++|+||+|.|.....
T Consensus 24 ~~~~~~~g~~l~~~~~~p~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~--------- 94 (270)
T 3pfb_A 24 TITLERDGLQLVGTREEPFGEIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSDGKFE--------- 94 (270)
T ss_dssp EEEEEETTEEEEEEEEECSSSSEEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCGG---------
T ss_pred EEEeccCCEEEEEEEEcCCCCCCCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccccccCCCCCCC---------
Confidence 34445689999999999876667899999999988 5668999999854 79999999999999975322
Q ss_pred chhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh----CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEecc
Q 013006 214 STEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV----IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNA 289 (451)
Q Consensus 214 ~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l----~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~ 289 (451)
.++++++++|+.++++.+ +.++++|+||||||.+++.+|.++|++|+++|++++
T Consensus 95 ----------------------~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~ 152 (270)
T 3pfb_A 95 ----------------------NMTVLNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAP 152 (270)
T ss_dssp ----------------------GCCHHHHHHHHHHHHHHHHTCTTEEEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESC
T ss_pred ----------------------ccCHHHHHHhHHHHHHHHHhCcCCCeEEEEEeCchhHHHHHHHHhCchhhcEEEEecc
Confidence 268999999999999998 668999999999999999999999999999999998
Q ss_pred CCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhH
Q 013006 290 TPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAA 369 (451)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (451)
... ........... .....+.... .............+
T Consensus 153 ~~~----------~~~~~~~~~~~----------------~~~~~~~~~~----~~~~~~~~~~~~~~------------ 190 (270)
T 3pfb_A 153 AAT----------LKGDALEGNTQ----------------GVTYNPDHIP----DRLPFKDLTLGGFY------------ 190 (270)
T ss_dssp CTH----------HHHHHHHTEET----------------TEECCTTSCC----SEEEETTEEEEHHH------------
T ss_pred ccc----------cchhhhhhhhh----------------ccccCccccc----ccccccccccchhH------------
Confidence 631 00000000000 0000000000 00000000000000
Q ss_pred HHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhh
Q 013006 370 AASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLC 449 (451)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~ 449 (451)
..... ..+....+.++++|+|+++|++|.+++++..+.+.+.++++++++++++||+++.++|+++++.
T Consensus 191 ----~~~~~-------~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~ 259 (270)
T 3pfb_A 191 ----LRIAQ-------QLPIYEVSAQFTKPVCLIHGTDDTVVSPNASKKYDQIYQNSTLHLIEGADHCFSDSYQKNAVNL 259 (270)
T ss_dssp ----HHHHH-------HCCHHHHHTTCCSCEEEEEETTCSSSCTHHHHHHHHHCSSEEEEEETTCCTTCCTHHHHHHHHH
T ss_pred ----hhccc-------ccCHHHHHhhCCccEEEEEcCCCCCCCHHHHHHHHHhCCCCeEEEcCCCCcccCccchHHHHHH
Confidence 00000 0123344567899999999999999999999999999999999999999999999999999887
Q ss_pred h
Q 013006 450 L 450 (451)
Q Consensus 450 I 450 (451)
|
T Consensus 260 i 260 (270)
T 3pfb_A 260 T 260 (270)
T ss_dssp H
T ss_pred H
Confidence 6
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=8.2e-28 Score=242.45 Aligned_cols=286 Identities=12% Similarity=0.071 Sum_probs=171.2
Q ss_pred CCeEEEEeecCCCCC-CCCcEEEecCCCCChhc---HHHHHH---hh-cCCceEEEEcCCC--CCCCCCCCCCCCCCCCC
Q 013006 143 PKFNVHYEKAGCENV-NSPPVLFLPGFGVGSFH---YEKQLK---DL-GKDYRAWAIDFLG--QGMSLPDEDPTPRSKEG 212 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~-~~p~VlllHG~~~~~~~---~~~~~~---~L-~~~~~Vi~~D~rG--~G~S~~~~~~~~~~~~~ 212 (451)
+|.+|+|+.+|+.++ .+|+|||+||++++... |..++. .| +++|+|+++|+|| +|.|........ .
T Consensus 92 ~g~~l~y~~~G~~~~~~~p~vvllHG~~~~~~~~~~w~~~~~~~~~L~~~~~~Vi~~D~~G~~~G~S~~~~~~~~-~--- 167 (444)
T 2vat_A 92 RDVPVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPD-A--- 167 (444)
T ss_dssp EEEEEEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTT-T---
T ss_pred cceeEEEEEecCCCCCCCCeEEEECCCCcccchhhHHHHhcCccchhhccCCEEEEecCCCCCCCCCCCCCCCcc-c---
Confidence 578999999997543 35899999999999998 988886 57 6789999999999 688864211000 0
Q ss_pred CchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCC-EEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 213 DSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREP-VYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 213 ~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~-v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
+....|+. ....++++++++|+.+++++++.++ ++||||||||++++.+|.++|++|+++|++++.+
T Consensus 168 ----~~~~~~~~--------~f~~~t~~~~a~dl~~ll~~l~~~~~~~lvGhSmGG~ial~~A~~~p~~v~~lVli~~~~ 235 (444)
T 2vat_A 168 ----EGQRPYGA--------KFPRTTIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSC 235 (444)
T ss_dssp ----C--CBCGG--------GCCCCCHHHHHHHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCS
T ss_pred ----cccccccc--------ccccccHHHHHHHHHHHHHhcCCccceEEEEECHHHHHHHHHHHhChHhhheEEEEeccc
Confidence 00000100 0012799999999999999999999 9999999999999999999999999999999864
Q ss_pred CCCCCCCCCCchH----HhhhcCCCCC-C---CChHHHHHHHHHHH-HhcCChHHHHHHHHHHhhcCCC-----------
Q 013006 292 FWGFSPNPIRSPK----LARILPWSGT-F---PLPASVRKLIEFIW-QKISDPESIAEVLKQVYADHAT----------- 351 (451)
Q Consensus 292 ~~~~~~~~~~~~~----~~~~~~~~~~-~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----------- 351 (451)
....... ..... ......|... + ..+........... ........+ ...+.....
T Consensus 236 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 310 (444)
T 2vat_A 236 RQSGWCA-AWFETQRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAM----DERFHMAPGVQAGRNISSQD 310 (444)
T ss_dssp BCCHHHH-HHHHHHHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHH----HHHSCCCCCCC---------
T ss_pred cCCccch-hHHHHHHHHHhcCCccccccccccCCcccchhHHHhhhhccccChHHH----HHHhccCccccccccccccc
Confidence 3100000 00000 0000011100 0 00110000000000 000011111 111111110
Q ss_pred ---------------------ChHHHHH----HHHhhccChhHHHHHHHHHhcCCCCCc-hhHHhhhccCCCCCEEEEee
Q 013006 352 ---------------------NVDTVFT----RILETTQHPAAAASFASIMFAPQGNLS-FREALSRCQMNGVPICLIYG 405 (451)
Q Consensus 352 ---------------------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~PvLii~G 405 (451)
..+.... .+... ............+........ ..+....+.++++|+|+|+|
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~i~~PvLvi~G 389 (444)
T 2vat_A 311 AKKEINGTDSGNSHRAGQPIEAVSSYLRYQAQKFAAS-FDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICA 389 (444)
T ss_dssp ------------------CGGGHHHHHHHHHHHHHHS-SCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEEC
T ss_pred cccccccccccccccccCchhhHHHHHHHHHHHHhhc-cCccHHHHHHHHhhhhhccccccccHHHHhhcCCCCEEEEEe
Confidence 0000000 01111 111111111111111100000 01144557789999999999
Q ss_pred CCCCCCChHHHHHHHHHCCCCcEEEeC-CCCCCccccChHHHHhhh
Q 013006 406 KEDPWVKPVWGLQVKRQVPEAPYYEIS-PAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 406 ~~D~~v~~~~~~~l~~~lp~~~~~~i~-~~gH~~~~e~p~~v~~~I 450 (451)
++|.+++++..+++++.+|++++++++ ++||++++|+|+++++.|
T Consensus 390 ~~D~~~p~~~~~~l~~~~p~~~~~~i~~~~GH~~~~e~p~~~~~~i 435 (444)
T 2vat_A 390 RSDGLYSFDEHVEMGRSIPNSRLCVVDTNEGHDFFVMEADKVNDAV 435 (444)
T ss_dssp TTCSSSCHHHHHHHHHHSTTEEEEECCCSCGGGHHHHTHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCcchHHhCHHHHHHHH
Confidence 999999999999999999999999999 899999999999999876
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.4e-27 Score=231.33 Aligned_cols=124 Identities=13% Similarity=0.217 Sum_probs=111.8
Q ss_pred eeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC----------CceEEEEcCCCCCCCCCCCCCCC
Q 013006 138 FWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK----------DYRAWAIDFLGQGMSLPDEDPTP 207 (451)
Q Consensus 138 ~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~----------~~~Vi~~D~rG~G~S~~~~~~~~ 207 (451)
+.+..+|.+|+|...++.++++++|||+||++++...|..++..|.+ +|+|+++|+||||.|+.+...
T Consensus 71 ~~~~i~g~~i~~~~~~~~~~~~~plll~HG~~~s~~~~~~~~~~L~~~~~~~~~~~~~~~vi~~dl~G~G~S~~~~~~-- 148 (388)
T 4i19_A 71 FTTEIDGATIHFLHVRSPEPDATPMVITHGWPGTPVEFLDIIGPLTDPRAHGGDPADAFHLVIPSLPGFGLSGPLKSA-- 148 (388)
T ss_dssp EEEEETTEEEEEEEECCSSTTCEEEEEECCTTCCGGGGHHHHHHHHCGGGGTSCGGGCEEEEEECCTTSGGGCCCSSC--
T ss_pred EEEEECCeEEEEEEccCCCCCCCeEEEECCCCCCHHHHHHHHHHHhCcccccCCCCCCeEEEEEcCCCCCCCCCCCCC--
Confidence 44456899999998876656789999999999999999999999987 899999999999999865432
Q ss_pred CCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEe
Q 013006 208 RSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLL 287 (451)
Q Consensus 208 ~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~ 287 (451)
.++++++++++..++++++.++++++||||||.+++.+|.++|++|++++++
T Consensus 149 ----------------------------~~~~~~~a~~~~~l~~~lg~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~ 200 (388)
T 4i19_A 149 ----------------------------GWELGRIAMAWSKLMASLGYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVN 200 (388)
T ss_dssp ----------------------------CCCHHHHHHHHHHHHHHTTCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEES
T ss_pred ----------------------------CCCHHHHHHHHHHHHHHcCCCcEEEEeccHHHHHHHHHHHhChhhceEEEEe
Confidence 1799999999999999999999999999999999999999999999999999
Q ss_pred ccCC
Q 013006 288 NATP 291 (451)
Q Consensus 288 ~~~~ 291 (451)
++.+
T Consensus 201 ~~~~ 204 (388)
T 4i19_A 201 LLQT 204 (388)
T ss_dssp SCCC
T ss_pred cCCC
Confidence 9754
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-27 Score=225.68 Aligned_cols=247 Identities=11% Similarity=0.077 Sum_probs=157.0
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCC--CCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhc
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGF--GVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNF 220 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~--~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~ 220 (451)
++..++|...+ .+|+|||+||+ +++...|..++..|+++|+|+++|+||||.|......
T Consensus 29 ~~~~~~~~~~~----~~p~vv~lHG~G~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~--------------- 89 (292)
T 3l80_A 29 LLGPIYTCHRE----GNPCFVFLSGAGFFSTADNFANIIDKLPDSIGILTIDAPNSGYSPVSNQA--------------- 89 (292)
T ss_dssp TTSCEEEEEEC----CSSEEEEECCSSSCCHHHHTHHHHTTSCTTSEEEEECCTTSTTSCCCCCT---------------
T ss_pred cCceEEEecCC----CCCEEEEEcCCCCCcHHHHHHHHHHHHhhcCeEEEEcCCCCCCCCCCCcc---------------
Confidence 44567776433 45899999955 6668899999999999999999999999999733221
Q ss_pred cccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCC
Q 013006 221 LWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPI 300 (451)
Q Consensus 221 ~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~ 300 (451)
.++++++++|+.+++++++.++++|+||||||.+++.+|.++|++|+++|++++...
T Consensus 90 ---------------~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~-------- 146 (292)
T 3l80_A 90 ---------------NVGLRDWVNAILMIFEHFKFQSYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTV-------- 146 (292)
T ss_dssp ---------------TCCHHHHHHHHHHHHHHSCCSEEEEEEETTHHHHHHHHHHHCSSEEEEEEEESCCCH--------
T ss_pred ---------------cccHHHHHHHHHHHHHHhCCCCeEEEEEchhHHHHHHHHHhCchheeeEEEECCCCc--------
Confidence 179999999999999999999999999999999999999999999999999997531
Q ss_pred CchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChH----HHHHHHHHHhhcCCCC-hHHHHHHHHhhccChhHHHHHHH
Q 013006 301 RSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPE----SIAEVLKQVYADHATN-VDTVFTRILETTQHPAAAASFAS 375 (451)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 375 (451)
... ...... ...+. . .. ......... .+...+..++...... ................. +..
T Consensus 147 ---~~~-~~~~~~-~~~~~-~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~ 213 (292)
T 3l80_A 147 ---MIY-RAGFSS-DLYPQ-L---AL-RRQKLKTAADRLNYLKDLSRSHFSSQQFKQLWRGYDYCQRQLNDVQS---LPD 213 (292)
T ss_dssp ---HHH-HHCTTS-SSSHH-H---HH-HHHTCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTTT---STT
T ss_pred ---chh-hhcccc-ccchh-H---HH-HHHHHhccCchhhhHhhccccccCHHHHHHhHHHHHHHHHHHHhhhh---ccc
Confidence 000 000000 00011 0 00 000011000 0111111111110000 00000000000000000 000
Q ss_pred HHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 376 IMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 376 ~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
......+...+....+.. ++|+|+|+|++|..++++ . .+.+.+|+.+ ++++++||++++|+|+++++.|
T Consensus 214 --~~~~~~~~~~~~~~~l~~-~~P~lii~g~~D~~~~~~-~-~~~~~~~~~~-~~~~~~gH~~~~e~p~~~~~~i 282 (292)
T 3l80_A 214 --FKIRLALGEEDFKTGISE-KIPSIVFSESFREKEYLE-S-EYLNKHTQTK-LILCGQHHYLHWSETNSILEKV 282 (292)
T ss_dssp --CCSSCCCCGGGGCCCCCT-TSCEEEEECGGGHHHHHT-S-TTCCCCTTCE-EEECCSSSCHHHHCHHHHHHHH
T ss_pred --cchhhhhcchhhhhccCC-CCCEEEEEccCccccchH-H-HHhccCCCce-eeeCCCCCcchhhCHHHHHHHH
Confidence 000011111222245666 999999999999999988 6 8888889999 9999999999999999999876
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.3e-26 Score=214.04 Aligned_cols=240 Identities=15% Similarity=0.177 Sum_probs=163.9
Q ss_pred CCccceeee---cCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHH--HHHhh-cCCceEEEEcCCCCCCCCCCCCCC
Q 013006 133 PITSCFWEW---KPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEK--QLKDL-GKDYRAWAIDFLGQGMSLPDEDPT 206 (451)
Q Consensus 133 ~~~~~~~~~---~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~--~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~ 206 (451)
++...+++. .||.+++|...++.++++|+|||+||++++...|.. +...| .++|+|+++|+||+|.|.....
T Consensus 8 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-- 85 (270)
T 3llc_A 8 PIETHAITVGQGSDARSIAALVRAPAQDERPTCIWLGGYRSDMTGTKALEMDDLAASLGVGAIRFDYSGHGASGGAFR-- 85 (270)
T ss_dssp CEEEEEEEESSGGGCEEEEEEEECCSSTTSCEEEEECCTTCCTTSHHHHHHHHHHHHHTCEEEEECCTTSTTCCSCGG--
T ss_pred CCCcceEEEeeccCcceEEEEeccCCCCCCCeEEEECCCccccccchHHHHHHHHHhCCCcEEEeccccCCCCCCccc--
Confidence 344445554 689999999776654558999999999998766644 56667 4589999999999999964322
Q ss_pred CCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHh---CC---Cc
Q 013006 207 PRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAAC---NP---HL 280 (451)
Q Consensus 207 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~---~P---~~ 280 (451)
.++++++++|+.++++.++.++++|+|||+||.+++.+|.+ +| ++
T Consensus 86 -----------------------------~~~~~~~~~d~~~~~~~l~~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~ 136 (270)
T 3llc_A 86 -----------------------------DGTISRWLEEALAVLDHFKPEKAILVGSSMGGWIALRLIQELKARHDNPTQ 136 (270)
T ss_dssp -----------------------------GCCHHHHHHHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHHHTCSCCSCE
T ss_pred -----------------------------cccHHHHHHHHHHHHHHhccCCeEEEEeChHHHHHHHHHHHHHhccccccc
Confidence 27999999999999999999999999999999999999999 99 99
Q ss_pred cceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHH
Q 013006 281 VKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRI 360 (451)
Q Consensus 281 v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (451)
|+++|++++.+.. .....+. ...+....................
T Consensus 137 v~~~il~~~~~~~------------~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~----- 180 (270)
T 3llc_A 137 VSGMVLIAPAPDF------------TSDLIEP-------------------LLGDRERAELAENGYFEEVSEYSP----- 180 (270)
T ss_dssp EEEEEEESCCTTH------------HHHTTGG-------------------GCCHHHHHHHHHHSEEEECCTTCS-----
T ss_pred cceeEEecCcccc------------hhhhhhh-------------------hhhhhhhhhhhccCcccChhhccc-----
Confidence 9999999986320 0000000 000111111111111000000000
Q ss_pred HhhccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC--CcEEEeCCCCCCc
Q 013006 361 LETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE--APYYEISPAGHCP 438 (451)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~--~~~~~i~~~gH~~ 438 (451)
.........+..... ......+.++++|+++++|++|.+++++..+.+.+.+++ +++++++++||++
T Consensus 181 ---~~~~~~~~~~~~~~~--------~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 249 (270)
T 3llc_A 181 ---EPNIFTRALMEDGRA--------NRVMAGMIDTGCPVHILQGMADPDVPYQHALKLVEHLPADDVVLTLVRDGDHRL 249 (270)
T ss_dssp ---SCEEEEHHHHHHHHH--------TCCTTSCCCCCSCEEEEEETTCSSSCHHHHHHHHHTSCSSSEEEEEETTCCSSC
T ss_pred ---chhHHHHHHHhhhhh--------hhhhhhhhcCCCCEEEEecCCCCCCCHHHHHHHHHhcCCCCeeEEEeCCCcccc
Confidence 000000000000000 112345677899999999999999999999999999998 8999999999965
Q ss_pred c-ccChHHHHhhh
Q 013006 439 H-DEVPEVCSLCL 450 (451)
Q Consensus 439 ~-~e~p~~v~~~I 450 (451)
. .+.++++.+.|
T Consensus 250 ~~~~~~~~~~~~i 262 (270)
T 3llc_A 250 SRPQDIDRMRNAI 262 (270)
T ss_dssp CSHHHHHHHHHHH
T ss_pred cccccHHHHHHHH
Confidence 4 56777777655
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.2e-26 Score=204.20 Aligned_cols=181 Identities=16% Similarity=0.172 Sum_probs=156.4
Q ss_pred ecCCeEEE---EeecCCCCCCCCcEEEecCCCCChhcHHH--HHHhhcC-CceEEEEcCCCCCCC---CCCCCCCCCCCC
Q 013006 141 WKPKFNVH---YEKAGCENVNSPPVLFLPGFGVGSFHYEK--QLKDLGK-DYRAWAIDFLGQGMS---LPDEDPTPRSKE 211 (451)
Q Consensus 141 ~~~g~~l~---y~~~g~~~~~~p~VlllHG~~~~~~~~~~--~~~~L~~-~~~Vi~~D~rG~G~S---~~~~~~~~~~~~ 211 (451)
..+|.+|+ |...| ++|+|||+||++++...|.. ++..|++ +|.|+++|+||+|.| ..+..
T Consensus 10 ~~~g~~l~~~~~~~~~----~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~------- 78 (207)
T 3bdi_A 10 DVNGTRVFQRKMVTDS----NRRSIALFHGYSFTSMDWDKADLFNNYSKIGYNVYAPDYPGFGRSASSEKYGI------- 78 (207)
T ss_dssp EETTEEEEEEEECCTT----CCEEEEEECCTTCCGGGGGGGTHHHHHHTTTEEEEEECCTTSTTSCCCTTTCC-------
T ss_pred eeCCcEEEEEEEeccC----CCCeEEEECCCCCCccccchHHHHHHHHhCCCeEEEEcCCcccccCcccCCCC-------
Confidence 35799999 66655 56899999999999999999 9999966 599999999999999 43321
Q ss_pred CCchhhhhccccCCCCCCcccccccc-CHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 212 GDSTEEKNFLWGFGDKAQPWASELAY-SVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 212 ~~~~~~~~~~w~~~~~~~~~~~~~~~-s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
.+ +++++++++..+++.++.++++++|||+||.+++.+|.++|+++++++++++.
T Consensus 79 ------------------------~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~ 134 (207)
T 3bdi_A 79 ------------------------DRGDLKHAAEFIRDYLKANGVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPA 134 (207)
T ss_dssp ------------------------TTCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred ------------------------CcchHHHHHHHHHHHHHHcCCCceEEEEECccHHHHHHHHHhCchhheEEEEeCCc
Confidence 15 89999999999999999999999999999999999999999999999999985
Q ss_pred CCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHH
Q 013006 291 PFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAA 370 (451)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (451)
... ..
T Consensus 135 ~~~-------------------------~~-------------------------------------------------- 139 (207)
T 3bdi_A 135 WVE-------------------------SL-------------------------------------------------- 139 (207)
T ss_dssp SCG-------------------------GG--------------------------------------------------
T ss_pred ccc-------------------------ch--------------------------------------------------
Confidence 310 00
Q ss_pred HHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 371 ASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
...+.++++|+++++|++|.+++++..+.+.+.++++++.+++++||+.+.++|+++.+.|
T Consensus 140 -------------------~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i 200 (207)
T 3bdi_A 140 -------------------KGDMKKIRQKTLLVWGSKDHVVPIALSKEYASIISGSRLEIVEGSGHPVYIEKPEEFVRIT 200 (207)
T ss_dssp -------------------HHHHTTCCSCEEEEEETTCTTTTHHHHHHHHHHSTTCEEEEETTCCSCHHHHSHHHHHHHH
T ss_pred -------------------hHHHhhccCCEEEEEECCCCccchHHHHHHHHhcCCceEEEeCCCCCCccccCHHHHHHHH
Confidence 1123457899999999999999999999999999999999999999999999999988765
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.9e-26 Score=211.97 Aligned_cols=219 Identities=13% Similarity=0.097 Sum_probs=152.4
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAY 237 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 237 (451)
.+|+|||+||++++...|..++..|+++|+|+++|+||||.|...... +
T Consensus 19 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~-------------------------------~ 67 (267)
T 3fla_A 19 ARARLVCLPHAGGSASFFFPLAKALAPAVEVLAVQYPGRQDRRHEPPV-------------------------------D 67 (267)
T ss_dssp CSEEEEEECCTTCCGGGGHHHHHHHTTTEEEEEECCTTSGGGTTSCCC-------------------------------C
T ss_pred CCceEEEeCCCCCCchhHHHHHHHhccCcEEEEecCCCCCCCCCCCCC-------------------------------c
Confidence 578999999999999999999999988899999999999999753321 6
Q ss_pred CHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCc----cceEEEeccCCCCCCCCCCCCchHHhhhcCCCC
Q 013006 238 SVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHL----VKGVTLLNATPFWGFSPNPIRSPKLARILPWSG 313 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~----v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (451)
+++++++++.+++++++.++++|+||||||.+++.+|.++|++ +++++++++.+...... ....
T Consensus 68 ~~~~~~~~~~~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~------------~~~~ 135 (267)
T 3fla_A 68 SIGGLTNRLLEVLRPFGDRPLALFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRD------------DDVR 135 (267)
T ss_dssp SHHHHHHHHHHHTGGGTTSCEEEEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCC------------SCTT
T ss_pred CHHHHHHHHHHHHHhcCCCceEEEEeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccc------------hhhc
Confidence 9999999999999999999999999999999999999999987 99999999764221110 0000
Q ss_pred CCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhc
Q 013006 314 TFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRC 393 (451)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 393 (451)
..........+. ..... .... +.. ........... ...+...... ... ..
T Consensus 136 ~~~~~~~~~~~~----~~~~~---~~~~----~~~-----~~~~~~~~~~~-----~~~~~~~~~~--------~~~-~~ 185 (267)
T 3fla_A 136 GASDERLVAELR----KLGGS---DAAM----LAD-----PELLAMVLPAI-----RSDYRAVETY--------RHE-PG 185 (267)
T ss_dssp CCCHHHHHHHHH----HTCHH---HHHH----HHS-----HHHHHHHHHHH-----HHHHHHHHHC--------CCC-TT
T ss_pred ccchHHHHHHHH----HhcCc---chhh----ccC-----HHHHHHHHHHH-----HHHHHhhhcc--------ccc-cc
Confidence 000011111111 00000 0000 000 00001000000 0001110000 000 11
Q ss_pred cCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC-CcEEEeCCCCCCccccChHHHHhhh
Q 013006 394 QMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE-APYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 394 ~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~-~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
..+++|+++|+|++|.+++++..+.+.+.+++ ++++++++ ||++++++|+++++.|
T Consensus 186 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~~~~~~~~i 242 (267)
T 3fla_A 186 RRVDCPVTVFTGDHDPRVSVGEARAWEEHTTGPADLRVLPG-GHFFLVDQAAPMIATM 242 (267)
T ss_dssp CCBSSCEEEEEETTCTTCCHHHHHGGGGGBSSCEEEEEESS-STTHHHHTHHHHHHHH
T ss_pred CcCCCCEEEEecCCCCCCCHHHHHHHHHhcCCCceEEEecC-CceeeccCHHHHHHHH
Confidence 46899999999999999999999999999998 89999998 9999999999998876
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-26 Score=208.10 Aligned_cols=189 Identities=20% Similarity=0.229 Sum_probs=155.3
Q ss_pred ccceeeecCCeEEEEeecCCCC-CCCCcEEEecCCCCChhcHHH--HHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCC
Q 013006 135 TSCFWEWKPKFNVHYEKAGCEN-VNSPPVLFLPGFGVGSFHYEK--QLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSK 210 (451)
Q Consensus 135 ~~~~~~~~~g~~l~y~~~g~~~-~~~p~VlllHG~~~~~~~~~~--~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~ 210 (451)
...+++. +|.+++|..+++.+ +++|+|||+||++++...|.. +++.|++ ||+|+++|+||+|.|......
T Consensus 8 ~~~~~~~-~g~~l~~~~~~p~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~----- 81 (210)
T 1imj_A 8 REGTIQV-QGQALFFREALPGSGQARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAP----- 81 (210)
T ss_dssp CCCCEEE-TTEEECEEEEECSSSCCSCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCCS-----
T ss_pred ccceEee-CCeEEEEEEeCCCCCCCCceEEEECCCCCccceeecchhHHHHHHCCCeEEEecCCCCCCCCCCCCc-----
Confidence 3344444 79999999986643 357899999999999999998 5888865 699999999999999754421
Q ss_pred CCCchhhhhccccCCCCCCccccccccCHHHHH--HHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEec
Q 013006 211 EGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQ--DQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLN 288 (451)
Q Consensus 211 ~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a--~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~ 288 (451)
.++++++ +++..++++++.++++++|||+||.+++.+|.++|++++++|+++
T Consensus 82 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~ 135 (210)
T 1imj_A 82 --------------------------APIGELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVA 135 (210)
T ss_dssp --------------------------SCTTSCCCTHHHHHHHHHHTCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEES
T ss_pred --------------------------chhhhcchHHHHHHHHHHhCCCCeEEEEECchHHHHHHHHHhCccccceEEEeC
Confidence 3444444 889999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChh
Q 013006 289 ATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPA 368 (451)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (451)
+.... .
T Consensus 136 ~~~~~------------------------------------------~-------------------------------- 141 (210)
T 1imj_A 136 PICTD------------------------------------------K-------------------------------- 141 (210)
T ss_dssp CSCGG------------------------------------------G--------------------------------
T ss_pred CCccc------------------------------------------c--------------------------------
Confidence 85210 0
Q ss_pred HHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHh
Q 013006 369 AAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSL 448 (451)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~ 448 (451)
.....+.++++|+++++|++|. ++++..+.+ +.++++++.+++++||+++.++|+++++
T Consensus 142 -------------------~~~~~~~~~~~p~l~i~g~~D~-~~~~~~~~~-~~~~~~~~~~~~~~~H~~~~~~~~~~~~ 200 (210)
T 1imj_A 142 -------------------INAANYASVKTPALIVYGDQDP-MGQTSFEHL-KQLPNHRVLIMKGAGHPCYLDKPEEWHT 200 (210)
T ss_dssp -------------------SCHHHHHTCCSCEEEEEETTCH-HHHHHHHHH-TTSSSEEEEEETTCCTTHHHHCHHHHHH
T ss_pred -------------------ccchhhhhCCCCEEEEEcCccc-CCHHHHHHH-hhCCCCCEEEecCCCcchhhcCHHHHHH
Confidence 0011224578999999999999 999999999 8899999999999999999999999887
Q ss_pred hh
Q 013006 449 CL 450 (451)
Q Consensus 449 ~I 450 (451)
.|
T Consensus 201 ~i 202 (210)
T 1imj_A 201 GL 202 (210)
T ss_dssp HH
T ss_pred HH
Confidence 65
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.94 E-value=3.3e-27 Score=224.91 Aligned_cols=233 Identities=16% Similarity=0.160 Sum_probs=152.2
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcC---CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGK---DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASE 234 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~---~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 234 (451)
++++|||+||++++...|..+++.|++ +|+|+++|+||||.|..+.
T Consensus 35 ~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~vi~~D~~G~G~s~~~~------------------------------- 83 (302)
T 1pja_A 35 SYKPVIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRPL------------------------------- 83 (302)
T ss_dssp CCCCEEEECCTTCCGGGGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCH-------------------------------
T ss_pred CCCeEEEECCCCCChhHHHHHHHHHHhcCCCcEEEEeccCCCccchhhH-------------------------------
Confidence 568999999999999999999999965 6999999999999986321
Q ss_pred cccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCC-ccceEEEeccCCCCCCCCCCCCchHHhhhcCCCC
Q 013006 235 LAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPH-LVKGVTLLNATPFWGFSPNPIRSPKLARILPWSG 313 (451)
Q Consensus 235 ~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (451)
.++++++++++.++++.+ .++++++||||||.+++.+|.++|+ +|+++|++++...... ...........
T Consensus 84 -~~~~~~~~~~l~~~~~~~-~~~~~lvGhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~----~~~~~~~~~~~--- 154 (302)
T 1pja_A 84 -WEQVQGFREAVVPIMAKA-PQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQY----GDTDYLKWLFP--- 154 (302)
T ss_dssp -HHHHHHHHHHHHHHHHHC-TTCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCTTCBC----SCCHHHHHHCT---
T ss_pred -HHHHHHHHHHHHHHhhcC-CCcEEEEEECHHHHHHHHHHHhcCccccCEEEEECCCccccc----ccchhhhhHHH---
Confidence 158899999999999988 7999999999999999999999999 7999999998642110 00011111000
Q ss_pred CCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhc
Q 013006 314 TFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRC 393 (451)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 393 (451)
.......... ...+.. .......+.......+ .+.. ...+..............+....+
T Consensus 155 -----~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~----~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l 214 (302)
T 1pja_A 155 -----TSMRSNLYRI---CYSPWG-QEFSICNYWHDPHHDD----LYLN-------ASSFLALINGERDHPNATVWRKNF 214 (302)
T ss_dssp -----TCCHHHHHHH---HTSTTG-GGSTGGGGBCCTTCHH----HHHH-------HCSSHHHHTTSSCCTTHHHHHHHH
T ss_pred -----HHHHHHHhhc---cchHHH-HHhhhhhcccChhhhh----hhhc-------cchHHHHhhcCCccccchhHHHHH
Confidence 0000000000 000000 0000000000000000 0000 000111111111111122345567
Q ss_pred cCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC---------------------------CcEEEeCCCCCCccccChHHH
Q 013006 394 QMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE---------------------------APYYEISPAGHCPHDEVPEVC 446 (451)
Q Consensus 394 ~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~---------------------------~~~~~i~~~gH~~~~e~p~~v 446 (451)
.+++ |+++|+|++|.+++++.++.+++..++ +++++++++||+++.|+|+++
T Consensus 215 ~~i~-P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~gH~~~~e~p~~~ 293 (302)
T 1pja_A 215 LRVG-HLVLIGGPDDGVITPWQSSFFGFYDANETVLEMEEQLVYLRDSFGLKTLLARGAIVRCPMAGISHTAWHSNRTLY 293 (302)
T ss_dssp TTCS-EEEEEECTTCSSSSSGGGGGTCEECTTCCEECGGGSHHHHTTTTSHHHHHHTTCEEEEECSSCCTTTTTSCHHHH
T ss_pred hccC-cEEEEEeCCCCccchhHhhHhhhcCCcccccchhhhhhhhhhhhchhhHhhcCCeEEEEecCccccccccCHHHH
Confidence 8899 999999999999999888888766666 899999999999999999999
Q ss_pred HhhhC
Q 013006 447 SLCLL 451 (451)
Q Consensus 447 ~~~Il 451 (451)
++.|+
T Consensus 294 ~~~i~ 298 (302)
T 1pja_A 294 ETCIE 298 (302)
T ss_dssp HHHTG
T ss_pred HHHHH
Confidence 98763
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-25 Score=210.52 Aligned_cols=228 Identities=15% Similarity=0.211 Sum_probs=157.3
Q ss_pred cCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhc
Q 013006 142 KPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNF 220 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~ 220 (451)
.+|.+++|.. | ++|+|||+||++++...|..++..|++ +|+|+++|+||+|.|.....
T Consensus 28 ~~g~~~~~~~-g----~~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~---------------- 86 (270)
T 3rm3_A 28 LSGAEPFYAE-N----GPVGVLLVHGFTGTPHSMRPLAEAYAKAGYTVCLPRLKGHGTHYEDME---------------- 86 (270)
T ss_dssp CTTCCCEEEC-C----SSEEEEEECCTTCCGGGTHHHHHHHHHTTCEEEECCCTTCSSCHHHHH----------------
T ss_pred CCCCcccccC-C----CCeEEEEECCCCCChhHHHHHHHHHHHCCCEEEEeCCCCCCCCccccc----------------
Confidence 4678888875 3 368999999999999999999999965 79999999999999953211
Q ss_pred cccCCCCCCccccccccCHHHHHHHHHHHHHHhC--CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCC
Q 013006 221 LWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI--REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPN 298 (451)
Q Consensus 221 ~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~--~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~ 298 (451)
.++++++++|+.++++.+. .++++|+|||+||.+++.+|.++|+ |+++|++++....
T Consensus 87 ---------------~~~~~~~~~d~~~~i~~l~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~----- 145 (270)
T 3rm3_A 87 ---------------RTTFHDWVASVEEGYGWLKQRCQTIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVDI----- 145 (270)
T ss_dssp ---------------TCCHHHHHHHHHHHHHHHHTTCSEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCC-----
T ss_pred ---------------cCCHHHHHHHHHHHHHHHHhhCCcEEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceecc-----
Confidence 2689999999999999998 8999999999999999999999999 9999999985421
Q ss_pred CCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHh
Q 013006 299 PIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMF 378 (451)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (451)
.............. ...... ........... . ............+ ...
T Consensus 146 ----~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~------~-~~~~~~~~~~~~~-------------~~~-- 193 (270)
T 3rm3_A 146 ----PAIAAGMTGGGELP--RYLDSI----GSDLKNPDVKE------L-AYEKTPTASLLQL-------------ARL-- 193 (270)
T ss_dssp ----HHHHHHSCC---CC--SEEECC----CCCCSCTTCCC------C-CCSEEEHHHHHHH-------------HHH--
T ss_pred ----cccccchhcchhHH--HHHHHh----CccccccchHh------h-cccccChhHHHHH-------------HHH--
Confidence 11111000000000 000000 00000000000 0 0000000001000 000
Q ss_pred cCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCC--cEEEeCCCCCCccccCh-HHHHhhh
Q 013006 379 APQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEA--PYYEISPAGHCPHDEVP-EVCSLCL 450 (451)
Q Consensus 379 ~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~--~~~~i~~~gH~~~~e~p-~~v~~~I 450 (451)
..+....+.++++|+|+++|++|.+++++..+.+.+.+++. ++++++++||+++.+.| +++++.|
T Consensus 194 -------~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i 261 (270)
T 3rm3_A 194 -------MAQTKAKLDRIVCPALIFVSDEDHVVPPGNADIIFQGISSTEKEIVRLRNSYHVATLDYDQPMIIERS 261 (270)
T ss_dssp -------HHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHSCCSSEEEEEESSCCSCGGGSTTHHHHHHHH
T ss_pred -------HHHHHhhhhhcCCCEEEEECCCCcccCHHHHHHHHHhcCCCcceEEEeCCCCcccccCccHHHHHHHH
Confidence 02333456778999999999999999999999999999876 89999999999999987 7777665
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.4e-25 Score=220.97 Aligned_cols=119 Identities=12% Similarity=0.085 Sum_probs=102.4
Q ss_pred eecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-------CceEEEEcCCCCCCCCCCCCCCCCCCCC
Q 013006 140 EWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-------DYRAWAIDFLGQGMSLPDEDPTPRSKEG 212 (451)
Q Consensus 140 ~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-------~~~Vi~~D~rG~G~S~~~~~~~~~~~~~ 212 (451)
+..+|.+|+|...|+.++++++|||+||++++...|..++..|++ +|+|+++|+||||.|+.+....
T Consensus 90 ~~i~g~~i~~~~~~~~~~~~~pllllHG~~~s~~~~~~~~~~L~~~~~~~~~gf~vv~~DlpG~G~S~~~~~~~------ 163 (408)
T 3g02_A 90 TEIEGLTIHFAALFSEREDAVPIALLHGWPGSFVEFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPPLDK------ 163 (408)
T ss_dssp EEETTEEEEEEEECCSCTTCEEEEEECCSSCCGGGGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCSCSSS------
T ss_pred EEECCEEEEEEEecCCCCCCCeEEEECCCCCcHHHHHHHHHHHhcccccccCceEEEEECCCCCCCCCCCCCCC------
Confidence 345899999999997666789999999999999999999999964 5899999999999998654211
Q ss_pred CchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCC-CEEEEEeCcchHHHHHHHHhCCCccceEEEe
Q 013006 213 DSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIRE-PVYVVGNSLGGFVAVYFAACNPHLVKGVTLL 287 (451)
Q Consensus 213 ~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~-~v~lvGhS~GG~val~~A~~~P~~v~~lvl~ 287 (451)
.++++++++++..++++++.+ +++++||||||++++.+|.++|+.+..++.+
T Consensus 164 -----------------------~~~~~~~a~~~~~l~~~lg~~~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~ 216 (408)
T 3g02_A 164 -----------------------DFGLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNF 216 (408)
T ss_dssp -----------------------CCCHHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESC
T ss_pred -----------------------CCCHHHHHHHHHHHHHHhCCCCCEEEeCCCchHHHHHHHHHhCCCceEEEEeC
Confidence 179999999999999999997 9999999999999999999997644444443
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.7e-24 Score=198.78 Aligned_cols=213 Identities=16% Similarity=0.169 Sum_probs=150.2
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELA 236 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 236 (451)
++|+|||+||++++...|..++..|+ ++|+|+++|+||||.|..... ..
T Consensus 21 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~------------------------------~~ 70 (251)
T 3dkr_A 21 TDTGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPLFSGHGTVEPLDI------------------------------LT 70 (251)
T ss_dssp SSEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCCTTCSSSCTHHH------------------------------HH
T ss_pred CCceEEEeCCCCCCHHHHHHHHHHHHHCCCEEEecCCCCCCCCChhhh------------------------------cC
Confidence 46899999999999999999999996 579999999999999953211 01
Q ss_pred c-CHHHHHHHHHHHHHHhCCC--CEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCC
Q 013006 237 Y-SVDLWQDQVCYFIKEVIRE--PVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSG 313 (451)
Q Consensus 237 ~-s~~~~a~dv~~ll~~l~~~--~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (451)
. +++++++|+.++++.+... +++++||||||.+++.+|.++|+++++++++++...... .
T Consensus 71 ~~~~~~~~~d~~~~i~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~-------~---------- 133 (251)
T 3dkr_A 71 KGNPDIWWAESSAAVAHMTAKYAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKH-------H---------- 133 (251)
T ss_dssp HCCHHHHHHHHHHHHHHHHTTCSEEEEEESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCB-------C----------
T ss_pred cccHHHHHHHHHHHHHHHHHhcCCeEEEEechHHHHHHHHHHhCccceeeEEEecchhhccc-------h----------
Confidence 3 8899999999999988755 999999999999999999999999999999987532100 0
Q ss_pred CCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhc
Q 013006 314 TFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRC 393 (451)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 393 (451)
..+.. ..+.. .+........ . ...+...... ....+... .......+
T Consensus 134 --~~~~~-~~~~~--------------~~~~~~~~~~-~-~~~~~~~~~~-----~~~~~~~~---------~~~~~~~~ 180 (251)
T 3dkr_A 134 --LVPGF-LKYAE--------------YMNRLAGKSD-E-STQILAYLPG-----QLAAIDQF---------ATTVAADL 180 (251)
T ss_dssp --HHHHH-HHHHH--------------HHHHHHTCCC-C-HHHHHHHHHH-----HHHHHHHH---------HHHHHHTG
T ss_pred --hhHHH-HHHHH--------------HHHhhcccCc-c-hhhHHhhhHH-----HHHHHHHH---------HHHHhccc
Confidence 00011 11111 1111111111 0 1111110000 00001110 01234456
Q ss_pred cCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC-C--cEEEeCCCCCCccccC-hHHHHhhh
Q 013006 394 QMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE-A--PYYEISPAGHCPHDEV-PEVCSLCL 450 (451)
Q Consensus 394 ~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~-~--~~~~i~~~gH~~~~e~-p~~v~~~I 450 (451)
.++++|+|+++|++|.+++++..+.+.+.+++ . ++++++++||+++.+. |+++++.|
T Consensus 181 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i 241 (251)
T 3dkr_A 181 NLVKQPTFIGQAGQDELVDGRLAYQLRDALINAARVDFHWYDDAKHVITVNSAHHALEEDV 241 (251)
T ss_dssp GGCCSCEEEEEETTCSSBCTTHHHHHHHHCTTCSCEEEEEETTCCSCTTTSTTHHHHHHHH
T ss_pred cccCCCEEEEecCCCcccChHHHHHHHHHhcCCCCceEEEeCCCCcccccccchhHHHHHH
Confidence 77899999999999999999999999999987 5 8899999999999986 99888765
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.4e-25 Score=207.47 Aligned_cols=218 Identities=12% Similarity=0.091 Sum_probs=146.3
Q ss_pred CCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccC
Q 013006 159 SPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYS 238 (451)
Q Consensus 159 ~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s 238 (451)
+|+|||+||++++...|..++..|+++|+|+++|+||||.|..... .++
T Consensus 51 ~~~lvllHG~~~~~~~~~~l~~~L~~~~~v~~~D~~G~G~S~~~~~-------------------------------~~~ 99 (280)
T 3qmv_A 51 PLRLVCFPYAGGTVSAFRGWQERLGDEVAVVPVQLPGRGLRLRERP-------------------------------YDT 99 (280)
T ss_dssp SEEEEEECCTTCCGGGGTTHHHHHCTTEEEEECCCTTSGGGTTSCC-------------------------------CCS
T ss_pred CceEEEECCCCCChHHHHHHHHhcCCCceEEEEeCCCCCCCCCCCC-------------------------------CCC
Confidence 4789999999999999999999998899999999999999964422 179
Q ss_pred HHHHHHHHHHHHHHh-CCCCEEEEEeCcchHHHHHHHHhCCCccc----eEEEeccCCCCCCCCCCCCchHHhhhcCCCC
Q 013006 239 VDLWQDQVCYFIKEV-IREPVYVVGNSLGGFVAVYFAACNPHLVK----GVTLLNATPFWGFSPNPIRSPKLARILPWSG 313 (451)
Q Consensus 239 ~~~~a~dv~~ll~~l-~~~~v~lvGhS~GG~val~~A~~~P~~v~----~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (451)
++++++++.++++++ +.++++|+||||||.+|+.+|.++|+++. .++++++.+....... ...
T Consensus 100 ~~~~a~~~~~~l~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~~------------~~~ 167 (280)
T 3qmv_A 100 MEPLAEAVADALEEHRLTHDYALFGHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDR------------ADH 167 (280)
T ss_dssp HHHHHHHHHHHHHHTTCSSSEEEEEETHHHHHHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSCC------------CGG
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEeCHhHHHHHHHHHHHHHcCCCCceEEEEECCCCCCCcCcc------------ccc
Confidence 999999999999999 78999999999999999999999998887 8888776432110000 000
Q ss_pred CCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhc
Q 013006 314 TFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRC 393 (451)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 393 (451)
.. ....+...+......+..... .. .+.... .......+.... . +. ...+
T Consensus 168 ~~----~~~~~~~~~~~~~~~~~~~~~-------------~~---~~~~~~-~~~~~~~~~~~~-~----~~----~~~~ 217 (280)
T 3qmv_A 168 TL----SDTALREVIRDLGGLDDADTL-------------GA---AYFDRR-LPVLRADLRACE-R----YD----WHPR 217 (280)
T ss_dssp GS----CHHHHHHHHHHHTCCC-------------------------CCTT-HHHHHHHHHHHH-T----CC----CCCC
T ss_pred cc----CHHHHHHHHHHhCCCChhhhc-------------CH---HHHHHH-HHHHHHHHHHHH-h----cc----ccCC
Confidence 00 001111111110000000000 00 000000 000000000000 0 00 1124
Q ss_pred cCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCC-cEEEeCCCCCCccc--cChHHHHhhh
Q 013006 394 QMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEA-PYYEISPAGHCPHD--EVPEVCSLCL 450 (451)
Q Consensus 394 ~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~-~~~~i~~~gH~~~~--e~p~~v~~~I 450 (451)
..+++|+|+|+|++|.+++++..+.+.+.+++. ++++++ +||++++ ++|+++++.|
T Consensus 218 ~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~-ggH~~~~~~~~~~~~~~~i 276 (280)
T 3qmv_A 218 PPLDCPTTAFSAAADPIATPEMVEAWRPYTTGSFLRRHLP-GNHFFLNGGPSRDRLLAHL 276 (280)
T ss_dssp CCBCSCEEEEEEEECSSSCHHHHHTTGGGBSSCEEEEEEE-EETTGGGSSHHHHHHHHHH
T ss_pred CceecCeEEEEecCCCCcChHHHHHHHHhcCCceEEEEec-CCCeEEcCchhHHHHHHHH
Confidence 578999999999999999999999999999875 666676 5999999 9999999876
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.91 E-value=4.7e-23 Score=185.08 Aligned_cols=190 Identities=13% Similarity=0.113 Sum_probs=145.3
Q ss_pred CccceeeecCCeEEEEeecCCCCC-CCCcEEEecCC-----CCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCC
Q 013006 134 ITSCFWEWKPKFNVHYEKAGCENV-NSPPVLFLPGF-----GVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPT 206 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y~~~g~~~~-~~p~VlllHG~-----~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~ 206 (451)
.+...+...+| ++++....+.+. +.|+|||+||+ ..+...|..++..|++ +|.|+++|+||+|.|.......
T Consensus 6 ~~~~~~~~~~g-~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~ 84 (208)
T 3trd_A 6 NEDFLIQGPVG-QLEVMITRPKGIEKSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNFRGVGKSQGRYDNG 84 (208)
T ss_dssp SSCEEEECSSS-EEEEEEECCSSCCCSEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCCTT
T ss_pred cceEEEECCCc-eEEEEEEcCCCCCCCCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEecCCCCCCCCCccch
Confidence 34455667788 999988887643 57899999993 3445568888888865 7999999999999996542110
Q ss_pred CCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEE
Q 013006 207 PRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTL 286 (451)
Q Consensus 207 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl 286 (451)
....+++.+.+..+.+.++.++++++|||+||.+++.++ .+| +++++|+
T Consensus 85 -----------------------------~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~ 133 (208)
T 3trd_A 85 -----------------------------VGEVEDLKAVLRWVEHHWSQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLIS 133 (208)
T ss_dssp -----------------------------THHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEE
T ss_pred -----------------------------HHHHHHHHHHHHHHHHhCCCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEE
Confidence 023455555555555555668999999999999999999 777 8999999
Q ss_pred eccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccC
Q 013006 287 LNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQH 366 (451)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (451)
+++...
T Consensus 134 ~~~~~~-------------------------------------------------------------------------- 139 (208)
T 3trd_A 134 VAPPVF-------------------------------------------------------------------------- 139 (208)
T ss_dssp ESCCTT--------------------------------------------------------------------------
T ss_pred eccccc--------------------------------------------------------------------------
Confidence 998510
Q ss_pred hhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC-CcEEEeCCCCCCccccChHH
Q 013006 367 PAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE-APYYEISPAGHCPHDEVPEV 445 (451)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~-~~~~~i~~~gH~~~~e~p~~ 445 (451)
.+ ....+..+++|+++++|++|.+++++..+++.+.+++ +++++++++||+++.+. ++
T Consensus 140 ----------------~~----~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~-~~ 198 (208)
T 3trd_A 140 ----------------YE----GFASLTQMASPWLIVQGDQDEVVPFEQVKAFVNQISSPVEFVVMSGASHFFHGRL-IE 198 (208)
T ss_dssp ----------------SG----GGTTCCSCCSCEEEEEETTCSSSCHHHHHHHHHHSSSCCEEEEETTCCSSCTTCH-HH
T ss_pred ----------------cC----CchhhhhcCCCEEEEECCCCCCCCHHHHHHHHHHccCceEEEEeCCCCCcccccH-HH
Confidence 00 0122345689999999999999999999999999987 89999999999998775 66
Q ss_pred HHhhh
Q 013006 446 CSLCL 450 (451)
Q Consensus 446 v~~~I 450 (451)
+.+.|
T Consensus 199 ~~~~i 203 (208)
T 3trd_A 199 LRELL 203 (208)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66554
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-23 Score=191.67 Aligned_cols=212 Identities=16% Similarity=0.118 Sum_probs=152.4
Q ss_pred ecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhh
Q 013006 141 WKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKN 219 (451)
Q Consensus 141 ~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~ 219 (451)
..+|+++.+..... .+|+|||+||++++...|..++..|++ ||.|+++|+||+|.|.........
T Consensus 9 ~~~g~~~~~~~~~~---~~~~vv~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~----------- 74 (238)
T 1ufo_A 9 TLAGLSVLARIPEA---PKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKS----------- 74 (238)
T ss_dssp EETTEEEEEEEESS---CCEEEEEECCTTCCHHHHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTS-----------
T ss_pred ccCCEEEEEEecCC---CccEEEEECCCcccchHHHHHHHHHHhCCCEEEEecCCCCccCCCCCCcccc-----------
Confidence 34678775554332 578999999999999999999999865 799999999999999754322100
Q ss_pred ccccCCCCCCccccccccCHHHHHHHHHHHHHHh---CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCC
Q 013006 220 FLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV---IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFS 296 (451)
Q Consensus 220 ~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l---~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~ 296 (451)
..+......+++++++|+.++++.+ +.++++++|||+||.+++.+|.++|+.+++++++++.......
T Consensus 75 ---------~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~ 145 (238)
T 1ufo_A 75 ---------PRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLP 145 (238)
T ss_dssp ---------TTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCCC
T ss_pred ---------cchhhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCccchhh
Confidence 0000011125677888888888775 4589999999999999999999999999999998875421111
Q ss_pred CCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHH
Q 013006 297 PNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASI 376 (451)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (451)
.. .+..+. . ... ..
T Consensus 146 ~~---------------~~~~~~-----------------~-------------------~~~-~~-------------- 159 (238)
T 1ufo_A 146 QG---------------QVVEDP-----------------G-------------------VLA-LY-------------- 159 (238)
T ss_dssp TT---------------CCCCCH-----------------H-------------------HHH-HH--------------
T ss_pred hh---------------hccCCc-----------------c-------------------cch-hh--------------
Confidence 00 000000 0 000 00
Q ss_pred HhcCCCCCchhHHhhhccCC-CCCEEEEeeCCCCCCChHHHHHHHHHCC------CCcEEEeCCCCCCccccChHHHHhh
Q 013006 377 MFAPQGNLSFREALSRCQMN-GVPICLIYGKEDPWVKPVWGLQVKRQVP------EAPYYEISPAGHCPHDEVPEVCSLC 449 (451)
Q Consensus 377 ~~~~~~~~~~~~~~~~l~~i-~~PvLii~G~~D~~v~~~~~~~l~~~lp------~~~~~~i~~~gH~~~~e~p~~v~~~ 449 (451)
. .+....+.++ ++|+++++|++|.+++++..+++.+.++ ++++++++++||+++.+.++++.+.
T Consensus 160 ------~---~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~ 230 (238)
T 1ufo_A 160 ------Q---APPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAF 230 (238)
T ss_dssp ------H---SCGGGCGGGGTTCCEEEEEETTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCSSCCHHHHHHHHHH
T ss_pred ------c---CChhhhhhhccCCcEEEEECCCCCccCcHHHHHHHHHHhhcCCCCceEEEEeCCCCcccHHHHHHHHHHH
Confidence 0 0112233455 8999999999999999999999999888 8899999999999999999988876
Q ss_pred h
Q 013006 450 L 450 (451)
Q Consensus 450 I 450 (451)
|
T Consensus 231 l 231 (238)
T 1ufo_A 231 L 231 (238)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.3e-24 Score=199.45 Aligned_cols=246 Identities=11% Similarity=0.073 Sum_probs=153.5
Q ss_pred ceeeecCCeEEEEeecCCCCC-CCCcEEEecCCC---CChhcHH-HHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCC
Q 013006 137 CFWEWKPKFNVHYEKAGCENV-NSPPVLFLPGFG---VGSFHYE-KQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKE 211 (451)
Q Consensus 137 ~~~~~~~g~~l~y~~~g~~~~-~~p~VlllHG~~---~~~~~~~-~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~ 211 (451)
..+...||.+++|..+.+... .+|+|||+||++ ++...|. .+...|+++|+|+++|+||+|.+..
T Consensus 6 ~~~~~~dg~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~~~~~~~~---------- 75 (275)
T 3h04_A 6 YKVITKDAFALPYTIIKAKNQPTKGVIVYIHGGGLMFGKANDLSPQYIDILTEHYDLIQLSYRLLPEVSL---------- 75 (275)
T ss_dssp EEEECTTSCEEEEEEECCSSSSCSEEEEEECCSTTTSCCTTCSCHHHHHHHTTTEEEEEECCCCTTTSCH----------
T ss_pred EEEecCCcEEEEEEEEccCCCCCCCEEEEEECCcccCCchhhhHHHHHHHHHhCceEEeeccccCCcccc----------
Confidence 345567899999998876532 568899999988 6666664 7778887779999999999987631
Q ss_pred CCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 212 GDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 212 ~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
....+++.+.+..+.+.++.++++|+||||||.+++.+|.+ ++++++|++++..
T Consensus 76 ------------------------~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~ 129 (275)
T 3h04_A 76 ------------------------DCIIEDVYASFDAIQSQYSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYS 129 (275)
T ss_dssp ------------------------HHHHHHHHHHHHHHHHTTTTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCS
T ss_pred ------------------------chhHHHHHHHHHHHHhhCCCCCEEEEEecHHHHHHHHHhcc--CCccEEEeccccc
Confidence 14566777777777777788899999999999999999999 7899999999864
Q ss_pred CCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCC-----ChHHHHHHHHhhccC
Q 013006 292 FWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHAT-----NVDTVFTRILETTQH 366 (451)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 366 (451)
... ....... ........ . ... ............. ...........
T Consensus 130 ~~~-------~~~~~~~---------~~~~~~~~----~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 180 (275)
T 3h04_A 130 RIN-------TEPFKTT---------NSYYAKIA----Q--SIN---ETMIAQLTSPTPVVQDQIAQRFLIYVYAR---- 180 (275)
T ss_dssp CSC-------SHHHHSC---------CHHHHHHH----T--TSC---HHHHHTTSCSSCCSSCSSGGGHHHHHHHH----
T ss_pred ccc-------ccccccc---------cchhhccc----c--cch---HHHHhcccCCCCcCCCccccchhhhhhhh----
Confidence 210 0100000 00000000 0 000 0000000000000 00000000000
Q ss_pred hhHHHHHHHHHhcCCC-CCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccCh--
Q 013006 367 PAAAASFASIMFAPQG-NLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVP-- 443 (451)
Q Consensus 367 ~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p-- 443 (451)
....+......... ..........+.+++ |+|+++|++|.++|++.++++.+.+++.++++++++||.++.+.|
T Consensus 181 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~ 257 (275)
T 3h04_A 181 --GTGKWINMINIADYTDSKYNIAPDELKTLP-PVFIAHCNGDYDVPVEESEHIMNHVPHSTFERVNKNEHDFDRRPNDE 257 (275)
T ss_dssp --HHTCHHHHHCCSCTTSGGGSCCHHHHTTCC-CEEEEEETTCSSSCTHHHHHHHTTCSSEEEEEECSSCSCTTSSCCHH
T ss_pred --hcCchHHhhccccccccccccccchhccCC-CEEEEecCCCCCCChHHHHHHHHhcCCceEEEeCCCCCCcccCCchh
Confidence 00001111111100 011111122345677 999999999999999999999999999999999999999999998
Q ss_pred -HHHHhhh
Q 013006 444 -EVCSLCL 450 (451)
Q Consensus 444 -~~v~~~I 450 (451)
+++.+.+
T Consensus 258 ~~~~~~~i 265 (275)
T 3h04_A 258 AITIYRKV 265 (275)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 4665544
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-23 Score=198.15 Aligned_cols=210 Identities=15% Similarity=0.121 Sum_probs=155.7
Q ss_pred cCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhc
Q 013006 142 KPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNF 220 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~ 220 (451)
.+|.+|++..+++. ..|+|||+||++++...|..++..|++ +|.|+++|+||+|.|.....
T Consensus 13 ~~g~~l~~~~~~p~--~~p~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~g~s~~~~~---------------- 74 (290)
T 3ksr_A 13 VGQDELSGTLLTPT--GMPGVLFVHGWGGSQHHSLVRAREAVGLGCICMTFDLRGHEGYASMRQ---------------- 74 (290)
T ss_dssp ETTEEEEEEEEEEE--SEEEEEEECCTTCCTTTTHHHHHHHHTTTCEEECCCCTTSGGGGGGTT----------------
T ss_pred CCCeEEEEEEecCC--CCcEEEEeCCCCCCcCcHHHHHHHHHHCCCEEEEeecCCCCCCCCCcc----------------
Confidence 48899999999875 679999999999999999999999976 79999999999999965322
Q ss_pred cccCCCCCCccccccccCHHHHHHHHHHHHHHhCC------CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCC
Q 013006 221 LWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR------EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWG 294 (451)
Q Consensus 221 ~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~------~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~ 294 (451)
.++++++++|+.++++.+.. ++++|+||||||.+++.+|.++| +++++++++.....
T Consensus 75 ---------------~~~~~~~~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~~~ 137 (290)
T 3ksr_A 75 ---------------SVTRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPALYKD 137 (290)
T ss_dssp ---------------TCBHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCCCCS
T ss_pred ---------------cccHHHHHHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcchhhh
Confidence 16889999999999999843 47999999999999999999998 89999998753211
Q ss_pred CCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHH
Q 013006 295 FSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFA 374 (451)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (451)
. .| ..+...... . .....+....
T Consensus 138 ~--------------~~----~~~~~~~~~----------~-------------------~~~~~~~~~~---------- 160 (290)
T 3ksr_A 138 A--------------HW----DQPKVSLNA----------D-------------------PDLMDYRRRA---------- 160 (290)
T ss_dssp S--------------CT----TSBHHHHHH----------S-------------------TTHHHHTTSC----------
T ss_pred h--------------hh----hcccccccC----------C-------------------hhhhhhhhhh----------
Confidence 0 00 011100000 0 0000000000
Q ss_pred HHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCc---EEEeCCCCCCcccc-ChHHHHhhh
Q 013006 375 SIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAP---YYEISPAGHCPHDE-VPEVCSLCL 450 (451)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~---~~~i~~~gH~~~~e-~p~~v~~~I 450 (451)
...........+.++++|+|+++|++|.+++++..+.+.+.+++.. +++++++||+++.+ .++++.+.|
T Consensus 161 -------~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i 233 (290)
T 3ksr_A 161 -------LAPGDNLALAACAQYKGDVLLVEAENDVIVPHPVMRNYADAFTNARSLTSRVIAGADHALSVKEHQQEYTRAL 233 (290)
T ss_dssp -------CCGGGCHHHHHHHHCCSEEEEEEETTCSSSCHHHHHHHHHHTTTSSEEEEEEETTCCTTCCSHHHHHHHHHHH
T ss_pred -------hhhccccHHHHHHhcCCCeEEEEecCCcccChHHHHHHHHHhccCCCceEEEcCCCCCCCCcchHHHHHHHHH
Confidence 0011123334456689999999999999999999999999998765 99999999987654 777777654
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.91 E-value=5e-23 Score=190.66 Aligned_cols=185 Identities=12% Similarity=0.068 Sum_probs=144.1
Q ss_pred cceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCCh-----hcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCC
Q 013006 136 SCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGS-----FHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRS 209 (451)
Q Consensus 136 ~~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~-----~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~ 209 (451)
...+...+| +|.+....+.++..|+|||+||++... ..|..++..|++ +|.|+++|+||+|.|.....
T Consensus 25 ~~~~~~~~g-~l~~~~~~p~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~----- 98 (249)
T 2i3d_A 25 EVIFNGPAG-RLEGRYQPSKEKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEFD----- 98 (249)
T ss_dssp EEEEEETTE-EEEEEEECCSSTTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCC-----
T ss_pred EEEEECCCc-eEEEEEEcCCCCCCCEEEEECCCcccCCCccchHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCC-----
Confidence 666777777 888777766555678999999985332 345788888854 79999999999999864321
Q ss_pred CCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhC-----CCCEEEEEeCcchHHHHHHHHhCCCccceE
Q 013006 210 KEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI-----REPVYVVGNSLGGFVAVYFAACNPHLVKGV 284 (451)
Q Consensus 210 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~-----~~~v~lvGhS~GG~val~~A~~~P~~v~~l 284 (451)
.+.+.+ +|+.++++.+. .++++++||||||.+++.+|.++|+ ++++
T Consensus 99 ---------------------------~~~~~~-~d~~~~i~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~ 149 (249)
T 2i3d_A 99 ---------------------------HGAGEL-SDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPE-IEGF 149 (249)
T ss_dssp ---------------------------SSHHHH-HHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTT-EEEE
T ss_pred ---------------------------CccchH-HHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcCCC-ccEE
Confidence 234444 67777776653 2479999999999999999999998 9999
Q ss_pred EEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhc
Q 013006 285 TLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETT 364 (451)
Q Consensus 285 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (451)
|++++.... + .
T Consensus 150 v~~~~~~~~---------------------~------------------~------------------------------ 160 (249)
T 2i3d_A 150 MSIAPQPNT---------------------Y------------------D------------------------------ 160 (249)
T ss_dssp EEESCCTTT---------------------S------------------C------------------------------
T ss_pred EEEcCchhh---------------------h------------------h------------------------------
Confidence 999985310 0 0
Q ss_pred cChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC-----CCcEEEeCCCCCCcc
Q 013006 365 QHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP-----EAPYYEISPAGHCPH 439 (451)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp-----~~~~~~i~~~gH~~~ 439 (451)
...+.++++|+++++|++|.+++++..+++.+.++ ++++++++++||+++
T Consensus 161 -------------------------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~ 215 (249)
T 2i3d_A 161 -------------------------FSFLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFN 215 (249)
T ss_dssp -------------------------CTTCTTCCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCT
T ss_pred -------------------------hhhhcccCCCEEEEEcCCCCCCCHHHHHHHHHHHhhccCCceeEEEECCCCcccc
Confidence 01234578999999999999999999999999887 678999999999988
Q ss_pred ccChHHHHhhh
Q 013006 440 DEVPEVCSLCL 450 (451)
Q Consensus 440 ~e~p~~v~~~I 450 (451)
+.++++.+.|
T Consensus 216 -~~~~~~~~~i 225 (249)
T 2i3d_A 216 -GKVDELMGEC 225 (249)
T ss_dssp -TCHHHHHHHH
T ss_pred -cCHHHHHHHH
Confidence 7888887765
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.91 E-value=9.9e-23 Score=197.55 Aligned_cols=113 Identities=12% Similarity=0.097 Sum_probs=87.3
Q ss_pred CeEEEEeecCCCCCCCCcEEEecCCCCChhc---HHHHHHhhcCCceEEEEc----CCCCCCCCCCCCCCCCCCCCCchh
Q 013006 144 KFNVHYEKAGCENVNSPPVLFLPGFGVGSFH---YEKQLKDLGKDYRAWAID----FLGQGMSLPDEDPTPRSKEGDSTE 216 (451)
Q Consensus 144 g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~---~~~~~~~L~~~~~Vi~~D----~rG~G~S~~~~~~~~~~~~~~~~~ 216 (451)
+..++|+..|+....+|+|||+||++.+... |..+++.|+++|+|+++| +||||.|+..
T Consensus 23 ~~~~~y~~~g~~~~~~~~vvllHG~~~~~~~~~~~~~l~~~L~~g~~Vi~~Dl~~D~~G~G~S~~~-------------- 88 (335)
T 2q0x_A 23 DPYCKIPVFMMNMDARRCVLWVGGQTESLLSFDYFTNLAEELQGDWAFVQVEVPSGKIGSGPQDHA-------------- 88 (335)
T ss_dssp ETTEEEEEEEECTTSSSEEEEECCTTCCTTCSTTHHHHHHHHTTTCEEEEECCGGGBTTSCSCCHH--------------
T ss_pred CCceeEEEeccCCCCCcEEEEECCCCccccchhHHHHHHHHHHCCcEEEEEeccCCCCCCCCcccc--------------
Confidence 3788998777211245899999999876543 678888998899999994 5999998421
Q ss_pred hhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHH--hCCCccceEEEeccC
Q 013006 217 EKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAA--CNPHLVKGVTLLNAT 290 (451)
Q Consensus 217 ~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~--~~P~~v~~lvl~~~~ 290 (451)
...+++.+.+..+.+.+++++++|+||||||.+++.+|. .+|++|+++|++++.
T Consensus 89 --------------------~~~~d~~~~~~~l~~~l~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~ 144 (335)
T 2q0x_A 89 --------------------HDAEDVDDLIGILLRDHCMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVV 144 (335)
T ss_dssp --------------------HHHHHHHHHHHHHHHHSCCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEEC
T ss_pred --------------------CcHHHHHHHHHHHHHHcCCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCc
Confidence 123444444444455578899999999999999999999 579999999999975
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.91 E-value=5.8e-24 Score=207.10 Aligned_cols=124 Identities=19% Similarity=0.314 Sum_probs=100.1
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCCCChhcHH----------------HHHHhhcC-CceEEEEcCCCCCCCCCCCCC
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYE----------------KQLKDLGK-DYRAWAIDFLGQGMSLPDEDP 205 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~----------------~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~ 205 (451)
+|+.++|...+.+ ++|+|||+||++++...|. .++..|++ ||+|+++|+||||.|......
T Consensus 36 ~~~~~~~~~~~~~--~~~~vv~~hG~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~ 113 (354)
T 2rau_A 36 DIISLHKVNLIGG--GNDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDR 113 (354)
T ss_dssp CEEEEEEEEETTC--CEEEEEEECCTTCCHHHHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGGGCCTTCCGG
T ss_pred CceEEEeecccCC--CCCEEEEECCCCCCccccccccccccccccccchhhHHHHHHhCCCEEEEecCCCCCCCCccccc
Confidence 5678888776542 5689999999999998666 88888865 799999999999999743221
Q ss_pred CCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHH----hCCCCEEEEEeCcchHHHHHHHHhC-CCc
Q 013006 206 TPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKE----VIREPVYVVGNSLGGFVAVYFAACN-PHL 280 (451)
Q Consensus 206 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~----l~~~~v~lvGhS~GG~val~~A~~~-P~~ 280 (451)
. ++. ...++++++++|+.++++. ++.++++++||||||.+++.+|.++ |++
T Consensus 114 ~---------------~~~---------~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~ 169 (354)
T 2rau_A 114 Q---------------LSF---------TANWGWSTWISDIKEVVSFIKRDSGQERIYLAGESFGGIAALNYSSLYWKND 169 (354)
T ss_dssp G---------------GGG---------GTTCSHHHHHHHHHHHHHHHHHHHCCSSEEEEEETHHHHHHHHHHHHHHHHH
T ss_pred c---------------ccc---------ccCCcHHHHHHHHHHHHHHHHHhcCCceEEEEEECHhHHHHHHHHHhcCccc
Confidence 0 000 0027889999999999988 4789999999999999999999999 999
Q ss_pred cceEEEeccCCC
Q 013006 281 VKGVTLLNATPF 292 (451)
Q Consensus 281 v~~lvl~~~~~~ 292 (451)
|+++|++++.+.
T Consensus 170 v~~lvl~~~~~~ 181 (354)
T 2rau_A 170 IKGLILLDGGPT 181 (354)
T ss_dssp EEEEEEESCSCB
T ss_pred cceEEEeccccc
Confidence 999999987653
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.2e-23 Score=185.39 Aligned_cols=170 Identities=17% Similarity=0.205 Sum_probs=129.5
Q ss_pred CCCcEEEecCCCCC---hhcHHH-HHHhhcC--CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcc
Q 013006 158 NSPPVLFLPGFGVG---SFHYEK-QLKDLGK--DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPW 231 (451)
Q Consensus 158 ~~p~VlllHG~~~~---~~~~~~-~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 231 (451)
+.|+|||+||++++ ...|.. +...|++ +|+|+++|+||++.
T Consensus 3 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~d~~g~~~--------------------------------- 49 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNMPDPIT--------------------------------- 49 (194)
T ss_dssp CCCEEEEECCSSSSCTTTSTTHHHHHHHHTTSTTCCEEECCCSSTTT---------------------------------
T ss_pred CCCEEEEECCCCCCCcccchHHHHHHHHHhhccCceEEEeeCCCCCc---------------------------------
Confidence 46899999999988 466877 7888876 89999999998631
Q ss_pred ccccccCHHHHHHHHHHHHHHhCC-CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcC
Q 013006 232 ASELAYSVDLWQDQVCYFIKEVIR-EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILP 310 (451)
Q Consensus 232 ~~~~~~s~~~~a~dv~~ll~~l~~-~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 310 (451)
.+ +.+++..++++++. ++++|+||||||.+++.+|.++| |+++|++++.... .
T Consensus 50 -----~~---~~~~~~~~~~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~--~-------------- 103 (194)
T 2qs9_A 50 -----AR---ESIWLPFMETELHCDEKTIIIGHSSGAIAAMRYAETHR--VYAIVLVSAYTSD--L-------------- 103 (194)
T ss_dssp -----CC---HHHHHHHHHHTSCCCTTEEEEEETHHHHHHHHHHHHSC--CSEEEEESCCSSC--T--------------
T ss_pred -----cc---HHHHHHHHHHHhCcCCCEEEEEcCcHHHHHHHHHHhCC--CCEEEEEcCCccc--c--------------
Confidence 13 35567777888888 89999999999999999999999 9999999985320 0
Q ss_pred CCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHh
Q 013006 311 WSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREAL 390 (451)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (451)
.... .....++. . ... .
T Consensus 104 -------~~~~------------------~~~~~~~~------------------~----------------~~~----~ 120 (194)
T 2qs9_A 104 -------GDEN------------------ERASGYFT------------------R----------------PWQ----W 120 (194)
T ss_dssp -------TCHH------------------HHHTSTTS------------------S----------------CCC----H
T ss_pred -------chhh------------------hHHHhhhc------------------c----------------ccc----H
Confidence 0000 00000000 0 000 0
Q ss_pred hhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 391 SRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 391 ~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
..+..+.+|+++++|++|.++|++..+.+.+.+ ++++.+++++||+++.++|+++++.+
T Consensus 121 ~~~~~~~~p~lii~G~~D~~vp~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~~~~~~ 179 (194)
T 2qs9_A 121 EKIKANCPYIVQFGSTDDPFLPWKEQQEVADRL-ETKLHKFTDCGHFQNTEFHELITVVK 179 (194)
T ss_dssp HHHHHHCSEEEEEEETTCSSSCHHHHHHHHHHH-TCEEEEESSCTTSCSSCCHHHHHHHH
T ss_pred HHHHhhCCCEEEEEeCCCCcCCHHHHHHHHHhc-CCeEEEeCCCCCccchhCHHHHHHHH
Confidence 112234679999999999999999999999988 89999999999999999999998764
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.90 E-value=7.4e-23 Score=203.70 Aligned_cols=240 Identities=10% Similarity=0.007 Sum_probs=146.9
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHH--HhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhc
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQL--KDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNF 220 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~--~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~ 220 (451)
+|.+|......+.++..|+|||+||++++...|...+ ..+.++|+|+++|+||+|.|......
T Consensus 143 ~~~~l~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~--------------- 207 (405)
T 3fnb_A 143 EGELLPGYAIISEDKAQDTLIVVGGGDTSREDLFYMLGYSGWEHDYNVLMVDLPGQGKNPNQGLH--------------- 207 (405)
T ss_dssp TTEEEEEEEECCSSSCCCEEEEECCSSCCHHHHHHHTHHHHHHTTCEEEEECCTTSTTGGGGTCC---------------
T ss_pred CCeEEEEEEEcCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHhCCcEEEEEcCCCCcCCCCCCCC---------------
Confidence 5677765444444445589999999999999997766 44578999999999999999532211
Q ss_pred cccCCCCCCccccccccCHHHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCC
Q 013006 221 LWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPN 298 (451)
Q Consensus 221 ~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~ 298 (451)
+.. ++.+|+..+++.+.. ++++|+|||+||.+++.+|.++| +|+++|++++...+
T Consensus 208 ----------------~~~-~~~~d~~~~~~~l~~~~~~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~~~----- 264 (405)
T 3fnb_A 208 ----------------FEV-DARAAISAILDWYQAPTEKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYDV----- 264 (405)
T ss_dssp ----------------CCS-CTHHHHHHHHHHCCCSSSCEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCSCH-----
T ss_pred ----------------CCc-cHHHHHHHHHHHHHhcCCCEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcCCH-----
Confidence 122 447788888888876 79999999999999999999999 89999999986421
Q ss_pred CCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHh
Q 013006 299 PIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMF 378 (451)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (451)
............ ..+.. ....+..............+...............+.....
T Consensus 265 ---~~~~~~~~~~~~--~~p~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (405)
T 3fnb_A 265 ---AEVFRISFSTAL--KAPKT-----------------ILKWGSKLVTSVNKVAEVNLNKYAWQFGQVDFITSVNEVLE 322 (405)
T ss_dssp ---HHHHHHHCC-------------------------------------CCCHHHHHHHHHHHHHHTSSSHHHHHHHHHH
T ss_pred ---HHHHHHhhhhhh--hCcHH-----------------HHHHHHHHhhccchhHHHHHHHhhhhcCCCCHHHHHHHHHH
Confidence 011111110000 00000 00000000000000000111111111111111111111110
Q ss_pred cCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC----CcEEEe---CCCCCCccccChHHHHhhh
Q 013006 379 APQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE----APYYEI---SPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 379 ~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~----~~~~~i---~~~gH~~~~e~p~~v~~~I 450 (451)
.. ....+.++++|+|+|+|++|.+++++.++++.+.+++ .+++++ +++||..+.++|+++++.|
T Consensus 323 ~~--------~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l~~~~~~~~l~~~~~~~h~gh~~~~~~~~~~~~~i 393 (405)
T 3fnb_A 323 QA--------QIVDYNKIDVPSLFLVGAGEDSELMRQSQVLYDNFKQRGIDVTLRKFSSESGADAHCQVNNFRLMHYQV 393 (405)
T ss_dssp HC--------CCCCGGGCCSCEEEEEETTSCHHHHHHHHHHHHHHHHTTCCEEEEEECTTTTCCSGGGGGGHHHHHHHH
T ss_pred hh--------cccCHhhCCCCEEEEecCCCcCCChHHHHHHHHHhccCCCCceEEEEcCCccchhccccchHHHHHHHH
Confidence 00 0011567899999999999999999999998888763 458899 6677888899999988765
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.90 E-value=4.8e-23 Score=181.17 Aligned_cols=162 Identities=19% Similarity=0.197 Sum_probs=132.4
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcC-Cc---eEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGK-DY---RAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWAS 233 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~-~~---~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 233 (451)
++|+|||+||++++...|..++..|.+ +| +|+++|+||+|.|..
T Consensus 2 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~~~~v~~~d~~g~g~s~~-------------------------------- 49 (181)
T 1isp_A 2 EHNPVVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNY-------------------------------- 49 (181)
T ss_dssp CCCCEEEECCTTCCGGGGHHHHHHHHHTTCCGGGEEECCCSCTTCCHH--------------------------------
T ss_pred CCCeEEEECCcCCCHhHHHHHHHHHHHcCCCCccEEEEecCCCCCchh--------------------------------
Confidence 468999999999999999999999955 66 799999999998741
Q ss_pred ccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhC--CCccceEEEeccCCCCCCCCCCCCchHHhhhcCC
Q 013006 234 ELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACN--PHLVKGVTLLNATPFWGFSPNPIRSPKLARILPW 311 (451)
Q Consensus 234 ~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~--P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (451)
++.+++++++..++++++.++++++||||||.+++.++.++ |++|+++|++++.......
T Consensus 50 ---~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~--------------- 111 (181)
T 1isp_A 50 ---NNGPVLSRFVQKVLDETGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTG--------------- 111 (181)
T ss_dssp ---HHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCS---------------
T ss_pred ---hhHHHHHHHHHHHHHHcCCCeEEEEEECccHHHHHHHHHhcCCCceEEEEEEEcCccccccc---------------
Confidence 47889999999999999999999999999999999999998 9999999999985310000
Q ss_pred CCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhh
Q 013006 312 SGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALS 391 (451)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (451)
.. . + ..
T Consensus 112 ------------------------------------~~--------------~--~---------------~~------- 117 (181)
T 1isp_A 112 ------------------------------------KA--------------L--P---------------GT------- 117 (181)
T ss_dssp ------------------------------------BC--------------C--C---------------CS-------
T ss_pred ------------------------------------cc--------------C--C---------------CC-------
Confidence 00 0 0 00
Q ss_pred hccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 392 RCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 392 ~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
....++|+++++|++|.++|++.. .++++++++++++||+.+.++| ++++.|
T Consensus 118 -~~~~~~p~l~i~G~~D~~v~~~~~-----~~~~~~~~~~~~~gH~~~~~~~-~~~~~i 169 (181)
T 1isp_A 118 -DPNQKILYTSIYSSADMIVMNYLS-----RLDGARNVQIHGVGHIGLLYSS-QVNSLI 169 (181)
T ss_dssp -CTTCCCEEEEEEETTCSSSCHHHH-----CCBTSEEEEESSCCTGGGGGCH-HHHHHH
T ss_pred -CCccCCcEEEEecCCCcccccccc-----cCCCCcceeeccCchHhhccCH-HHHHHH
Confidence 011368999999999999998843 3789999999999999999997 566554
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=9.2e-23 Score=186.38 Aligned_cols=193 Identities=15% Similarity=0.075 Sum_probs=148.3
Q ss_pred eeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhh
Q 013006 139 WEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEE 217 (451)
Q Consensus 139 ~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~ 217 (451)
+...+|.++.+....+.+.+.|+||++||++++...|..++..|++ +|.|+++|+||+|.|........ .++
T Consensus 8 ~~~~~g~~l~~~~~~p~~~~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~-------~~~ 80 (236)
T 1zi8_A 8 IQSYDGHTFGALVGSPAKAPAPVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQD-------ERQ 80 (236)
T ss_dssp EECTTSCEECEEEECCSSCSEEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTC-------HHH
T ss_pred EecCCCCeEEEEEECCCCCCCCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEeccccccCCCcccccccc-------hhh
Confidence 4456888898888877655568999999999999999999999865 89999999999998864221100 000
Q ss_pred hhccccCCCCCCccccccccCHHHHHHHHHHHHHHhC-----CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCC
Q 013006 218 KNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI-----REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPF 292 (451)
Q Consensus 218 ~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~-----~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~ 292 (451)
....++ ....++.+.+++|+.++++.+. .++++++|||+||.+++.+|.++| +++++++.+...
T Consensus 81 ~~~~~~---------~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~ 149 (236)
T 1zi8_A 81 REQAYK---------LWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYSLGGALAFLVASKGY--VDRAVGYYGVGL 149 (236)
T ss_dssp HHHHHH---------HHHHCCHHHHHHHHHHHHHHHTSSTTEEEEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSSG
T ss_pred hhhhhh---------hhhccCcchhhHHHHHHHHHHHhccCCCCCEEEEEECcCHHHHHHHhccCC--ccEEEEecCccc
Confidence 000000 0112578889999999999986 468999999999999999999998 999998876310
Q ss_pred CCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHH
Q 013006 293 WGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAAS 372 (451)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (451)
+
T Consensus 150 ------------------------------------------~------------------------------------- 150 (236)
T 1zi8_A 150 ------------------------------------------E------------------------------------- 150 (236)
T ss_dssp ------------------------------------------G-------------------------------------
T ss_pred ------------------------------------------c-------------------------------------
Confidence 0
Q ss_pred HHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHC---CCCcEEEeCCCCCCccccCh
Q 013006 373 FASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQV---PEAPYYEISPAGHCPHDEVP 443 (451)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l---p~~~~~~i~~~gH~~~~e~p 443 (451)
+....+.++++|+++++|++|.+++++..+.+.+.+ +++++++++++||.+..+.+
T Consensus 151 ---------------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~ 209 (236)
T 1zi8_A 151 ---------------KQLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFARTGS 209 (236)
T ss_dssp ---------------GCGGGGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCTTEEEEEETTCCTTTTCTTS
T ss_pred ---------------cchhhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCceEEEECCCCcccccCCC
Confidence 011234567899999999999999999999988887 57889999999998887765
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.3e-23 Score=193.26 Aligned_cols=215 Identities=15% Similarity=0.136 Sum_probs=141.8
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAY 237 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 237 (451)
.+++|||+||++++...|..++. |.++|+|+++|+||+|.+... .+
T Consensus 20 ~~~~lv~lhg~~~~~~~~~~~~~-l~~~~~v~~~d~~G~~~~~~~---------------------------------~~ 65 (265)
T 3ils_A 20 ARKTLFMLPDGGGSAFSYASLPR-LKSDTAVVGLNCPYARDPENM---------------------------------NC 65 (265)
T ss_dssp SSEEEEEECCTTCCGGGGTTSCC-CSSSEEEEEEECTTTTCGGGC---------------------------------CC
T ss_pred CCCEEEEECCCCCCHHHHHHHHh-cCCCCEEEEEECCCCCCCCCC---------------------------------CC
Confidence 56899999999999999999999 988999999999999766432 16
Q ss_pred CHHHHHHHHHHHHHHhC-CCCEEEEEeCcchHHHHHHHH---hCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCC
Q 013006 238 SVDLWQDQVCYFIKEVI-REPVYVVGNSLGGFVAVYFAA---CNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSG 313 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l~-~~~v~lvGhS~GG~val~~A~---~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (451)
+++++++++.++++.+. .++++|+||||||.+|+.+|. .+|++|+++|++++.+.....
T Consensus 66 ~~~~~~~~~~~~i~~~~~~~~~~l~GhS~Gg~ia~~~a~~l~~~~~~v~~lvl~~~~~~~~~~----------------- 128 (265)
T 3ils_A 66 THGAMIESFCNEIRRRQPRGPYHLGGWSSGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAME----------------- 128 (265)
T ss_dssp CHHHHHHHHHHHHHHHCSSCCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCSSCCCC-----------------
T ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEECHhHHHHHHHHHHHHhCCCCceEEEEEcCCCCCccc-----------------
Confidence 99999999999999995 469999999999999999998 678889999999986431110
Q ss_pred CCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhc
Q 013006 314 TFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRC 393 (451)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 393 (451)
.++.....+...+......+.. ...... .....+.. .+........ .+. ....
T Consensus 129 --~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-~~~~~~~~------------~~~~~~~~~~-~~~----~~~~ 181 (265)
T 3ils_A 129 --QLPRAFYEHCNSIGLFATQPGA-------SPDGST-EPPSYLIP------------HFTAVVDVML-DYK----LAPL 181 (265)
T ss_dssp --CCCHHHHHHHHHTTTTTTSSSS-------CSSSCS-CCCTTHHH------------HHHHHHHHTT-TCC----CCCC
T ss_pred --ccCHHHHHHHHHHHHhCCCccc-------cccCCH-HHHHHHHH------------HHHHHHHHHH-hcC----CCCC
Confidence 0111111111110000000000 000000 00000000 0000000000 000 0112
Q ss_pred cCCCCCEE-EEeeCC---CCCC--------------ChHHHHHHHHHCC--CCcEEEeCCCCCCcc--ccChHHHHhhh
Q 013006 394 QMNGVPIC-LIYGKE---DPWV--------------KPVWGLQVKRQVP--EAPYYEISPAGHCPH--DEVPEVCSLCL 450 (451)
Q Consensus 394 ~~i~~PvL-ii~G~~---D~~v--------------~~~~~~~l~~~lp--~~~~~~i~~~gH~~~--~e~p~~v~~~I 450 (451)
..+++|++ +++|++ |..+ +......+.+..+ ++++++++++||+++ .|+|+++++.|
T Consensus 182 ~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~i~gagH~~~~~~e~~~~v~~~i 260 (265)
T 3ils_A 182 HARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFGPDGWDTIMPGASFDIVRADGANHFTLMQKEHVSIISDLI 260 (265)
T ss_dssp CCSSCCEEEEEEEEECSSCTTTSCCCSSCCTTTSCCCCCSCTTHHHHSTTCCEEEEEEEEEETTGGGSTTTTHHHHHHH
T ss_pred ccCCCCeEEEEEccCCCCccccCccccCcchhhccccccCcchHHHhCCccceeEEEcCCCCcceeeChhhHHHHHHHH
Confidence 46899988 999999 9988 4444455666666 788999999999999 99999999876
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.89 E-value=8e-23 Score=181.23 Aligned_cols=168 Identities=20% Similarity=0.301 Sum_probs=131.6
Q ss_pred CCcEEEecCCCCChh-cHHHHHH-hh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccc
Q 013006 159 SPPVLFLPGFGVGSF-HYEKQLK-DL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASEL 235 (451)
Q Consensus 159 ~p~VlllHG~~~~~~-~~~~~~~-~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 235 (451)
.|+|||+||++++.. .|..++. .| .++|+|+++|+| .|. .
T Consensus 4 ~p~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~---~~~---~------------------------------- 46 (192)
T 1uxo_A 4 TKQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMP---NPL---Q------------------------------- 46 (192)
T ss_dssp CCEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCS---CTT---S-------------------------------
T ss_pred CCEEEEEcCCCCCcchhHHHHHHHHHHhCCcEEEEecCC---CCC---C-------------------------------
Confidence 356999999999998 8988885 58 578999999999 221 1
Q ss_pred ccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCC--ccceEEEeccCCCCCCCCCCCCchHHhhhcCCCC
Q 013006 236 AYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPH--LVKGVTLLNATPFWGFSPNPIRSPKLARILPWSG 313 (451)
Q Consensus 236 ~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (451)
.+++++++++..+++.+ .++++++||||||.+++.+|.++|+ +|+++|++++..... .
T Consensus 47 -~~~~~~~~~~~~~~~~~-~~~~~l~G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~--~---------------- 106 (192)
T 1uxo_A 47 -PRLEDWLDTLSLYQHTL-HENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSL--P---------------- 106 (192)
T ss_dssp -CCHHHHHHHHHTTGGGC-CTTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCC--T----------------
T ss_pred -CCHHHHHHHHHHHHHhc-cCCEEEEEeCccHHHHHHHHHHhcccCCccEEEEeccCCCcc--c----------------
Confidence 37899999999999988 8999999999999999999999999 999999999853210 0
Q ss_pred CCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhc
Q 013006 314 TFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRC 393 (451)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 393 (451)
..+. + . .+... ..+. ..+
T Consensus 107 --~~~~------------------~----~-~~~~~---------------------------------~~~~----~~~ 124 (192)
T 1uxo_A 107 --TLQM------------------L----D-EFTQG---------------------------------SFDH----QKI 124 (192)
T ss_dssp --TCGG------------------G----G-GGTCS---------------------------------CCCH----HHH
T ss_pred --cchh------------------h----h-hhhhc---------------------------------CCCH----HHH
Confidence 0000 0 0 00000 0111 123
Q ss_pred cCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHH
Q 013006 394 QMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVC 446 (451)
Q Consensus 394 ~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v 446 (451)
.++++|+++++|++|.++|++..+.+++.+ ++++++++++||+++.++|+++
T Consensus 125 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~ 176 (192)
T 1uxo_A 125 IESAKHRAVIASKDDQIVPFSFSKDLAQQI-DAALYEVQHGGHFLEDEGFTSL 176 (192)
T ss_dssp HHHEEEEEEEEETTCSSSCHHHHHHHHHHT-TCEEEEETTCTTSCGGGTCSCC
T ss_pred HhhcCCEEEEecCCCCcCCHHHHHHHHHhc-CceEEEeCCCcCcccccccccH
Confidence 345789999999999999999999999999 9999999999999999998655
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.9e-23 Score=182.69 Aligned_cols=167 Identities=14% Similarity=0.167 Sum_probs=133.3
Q ss_pred CeEEEEeecCCCCCCCCcEEEecCCCCCh-hcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccc
Q 013006 144 KFNVHYEKAGCENVNSPPVLFLPGFGVGS-FHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLW 222 (451)
Q Consensus 144 g~~l~y~~~g~~~~~~p~VlllHG~~~~~-~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w 222 (451)
|.+++|...| ++|+|||+||++++. ..|...+..+.. .++.+|++|++.
T Consensus 6 g~~l~~~~~g----~~~~vv~~HG~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~------------------------ 55 (191)
T 3bdv_A 6 EIDLRLTEVS----QQLTMVLVPGLRDSDDEHWQSHWERRFP--HWQRIRQREWYQ------------------------ 55 (191)
T ss_dssp HHHHHHHHHH----TTCEEEEECCTTCCCTTSHHHHHHHHCT--TSEECCCSCCSS------------------------
T ss_pred cCccccCCCC----CCceEEEECCCCCCchhhHHHHHHHhcC--CeEEEeccCCCC------------------------
Confidence 4455555555 468999999999887 778887776433 356788888642
Q ss_pred cCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCc
Q 013006 223 GFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRS 302 (451)
Q Consensus 223 ~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~ 302 (451)
++++++++++.+++++++ ++++++||||||.+++.+|.++|++|+++|++++.....
T Consensus 56 --------------~~~~~~~~~~~~~~~~~~-~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~-------- 112 (191)
T 3bdv_A 56 --------------ADLDRWVLAIRRELSVCT-QPVILIGHSFGALAACHVVQQGQEGIAGVMLVAPAEPMR-------- 112 (191)
T ss_dssp --------------CCHHHHHHHHHHHHHTCS-SCEEEEEETHHHHHHHHHHHTTCSSEEEEEEESCCCGGG--------
T ss_pred --------------cCHHHHHHHHHHHHHhcC-CCeEEEEEChHHHHHHHHHHhcCCCccEEEEECCCcccc--------
Confidence 589999999999999987 899999999999999999999999999999999853100
Q ss_pred hHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCC
Q 013006 303 PKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQG 382 (451)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (451)
. .+ + ..
T Consensus 113 ----~------~~-------------------~------------~~--------------------------------- 118 (191)
T 3bdv_A 113 ----F------EI-------------------D------------DR--------------------------------- 118 (191)
T ss_dssp ----G------TC-------------------T------------TT---------------------------------
T ss_pred ----c------cC-------------------c------------cc---------------------------------
Confidence 0 00 0 00
Q ss_pred CCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccc----cChHHH
Q 013006 383 NLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHD----EVPEVC 446 (451)
Q Consensus 383 ~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~----e~p~~v 446 (451)
..+.++++|+++++|++|.++|++..+++.+.+ ++++++++++||+++. +.|+.+
T Consensus 119 --------~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~ 177 (191)
T 3bdv_A 119 --------IQASPLSVPTLTFASHNDPLMSFTRAQYWAQAW-DSELVDVGEAGHINAEAGFGPWEYGL 177 (191)
T ss_dssp --------SCSSCCSSCEEEEECSSBTTBCHHHHHHHHHHH-TCEEEECCSCTTSSGGGTCSSCHHHH
T ss_pred --------cccccCCCCEEEEecCCCCcCCHHHHHHHHHhc-CCcEEEeCCCCcccccccchhHHHHH
Confidence 224568999999999999999999999998887 8999999999999998 566655
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.1e-23 Score=187.51 Aligned_cols=186 Identities=19% Similarity=0.110 Sum_probs=147.1
Q ss_pred cCCeEEEEeecCCCCCCCCcEEEecCCCCChhcH--HHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhh
Q 013006 142 KPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHY--EKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEK 218 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~--~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~ 218 (451)
.+|.++.+....+.+ +.|+||++||++++...| ..++..|++ +|.|+++|+||+|.|......
T Consensus 19 ~~g~~l~~~~~~p~~-~~p~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~------------- 84 (223)
T 2o2g_A 19 VGEVKLKGNLVIPNG-ATGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDLLTQEEEEIDLRT------------- 84 (223)
T ss_dssp ETTEEEEEEEECCTT-CCEEEEEECCTTCCTTCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHH-------------
T ss_pred cCCeEEEEEEecCCC-CceEEEEecCCCCCCCccchHHHHHHHHHCCCEEEEEcCCCcCCCCccchh-------------
Confidence 489999998887754 578999999999888754 467788855 799999999999987532110
Q ss_pred hccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCC------CEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCC
Q 013006 219 NFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIRE------PVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPF 292 (451)
Q Consensus 219 ~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~------~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~ 292 (451)
+ ...++++++++|+.++++.+... +++++|||+||.+++.+|.++|++++++|++++.+.
T Consensus 85 ---~-----------~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~ 150 (223)
T 2o2g_A 85 ---R-----------HLRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPD 150 (223)
T ss_dssp ---C-----------SSTTCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCGG
T ss_pred ---h-----------cccCcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCCCC
Confidence 0 01168899999999999988544 899999999999999999999999999999997420
Q ss_pred CCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHH
Q 013006 293 WGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAAS 372 (451)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (451)
.
T Consensus 151 ~------------------------------------------------------------------------------- 151 (223)
T 2o2g_A 151 L------------------------------------------------------------------------------- 151 (223)
T ss_dssp G-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccc-cChHHHHhhh
Q 013006 373 FASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHD-EVPEVCSLCL 450 (451)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~-e~p~~v~~~I 450 (451)
....+.++++|+++++|++|.+++....+.+.+..++.++.+++++||++.. +.++++.+.|
T Consensus 152 ----------------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i 214 (223)
T 2o2g_A 152 ----------------APSALPHVKAPTLLIVGGYDLPVIAMNEDALEQLQTSKRLVIIPRASHLFEEPGALTAVAQLA 214 (223)
T ss_dssp ----------------CTTTGGGCCSCEEEEEETTCHHHHHHHHHHHHHCCSSEEEEEETTCCTTCCSTTHHHHHHHHH
T ss_pred ----------------CHHHHhcCCCCEEEEEccccCCCCHHHHHHHHhhCCCeEEEEeCCCCcccCChHHHHHHHHHH
Confidence 0012345789999999999999987777777777688999999999999776 4567777654
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.4e-22 Score=175.31 Aligned_cols=163 Identities=15% Similarity=0.168 Sum_probs=132.5
Q ss_pred CCCcEEEecCCCCChhcHH--HHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYE--KQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASE 234 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~--~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 234 (451)
++|+|||+||++++...|. .+.+.|++ +|.|+++|+||+|.|.....
T Consensus 3 ~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~------------------------------ 52 (176)
T 2qjw_A 3 SRGHCILAHGFESGPDALKVTALAEVAERLGWTHERPDFTDLDARRDLGQ------------------------------ 52 (176)
T ss_dssp SSCEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEECCCCHHHHTCGGGCT------------------------------
T ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCC------------------------------
Confidence 4688999999998887665 78888854 79999999999999863211
Q ss_pred cccCHHHHHHHHHHHHHHhC-CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCC
Q 013006 235 LAYSVDLWQDQVCYFIKEVI-REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSG 313 (451)
Q Consensus 235 ~~~s~~~~a~dv~~ll~~l~-~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (451)
..+..+.++++.+.++... .++++++||||||.+++.+|.++| ++++|++++...... +
T Consensus 53 -~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~---------------~-- 112 (176)
T 2qjw_A 53 -LGDVRGRLQRLLEIARAATEKGPVVLAGSSLGSYIAAQVSLQVP--TRALFLMVPPTKMGP---------------L-- 112 (176)
T ss_dssp -TCCHHHHHHHHHHHHHHHHTTSCEEEEEETHHHHHHHHHHTTSC--CSEEEEESCCSCBTT---------------B--
T ss_pred -CCCHHHHHHHHHHHHHhcCCCCCEEEEEECHHHHHHHHHHHhcC--hhheEEECCcCCccc---------------c--
Confidence 1467788888888887765 679999999999999999999998 999999998532100 0
Q ss_pred CCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhc
Q 013006 314 TFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRC 393 (451)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 393 (451)
. . +
T Consensus 113 --~-----------------~----------------------------------------------------------~ 115 (176)
T 2qjw_A 113 --P-----------------A----------------------------------------------------------L 115 (176)
T ss_dssp --C-----------------C----------------------------------------------------------C
T ss_pred --C-----------------c----------------------------------------------------------c
Confidence 0 0 3
Q ss_pred cCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 394 QMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 394 ~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
..+++|+++++|++|.++|++..+++.+.+ +++++++ ++||++. +.++++.+.|
T Consensus 116 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~-~~~H~~~-~~~~~~~~~i 169 (176)
T 2qjw_A 116 DAAAVPISIVHAWHDELIPAADVIAWAQAR-SARLLLV-DDGHRLG-AHVQAASRAF 169 (176)
T ss_dssp CCCSSCEEEEEETTCSSSCHHHHHHHHHHH-TCEEEEE-SSCTTCT-TCHHHHHHHH
T ss_pred cccCCCEEEEEcCCCCccCHHHHHHHHHhC-CceEEEe-CCCcccc-ccHHHHHHHH
Confidence 457899999999999999999999998887 7889999 8999984 8888887765
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=8.7e-23 Score=197.36 Aligned_cols=207 Identities=13% Similarity=0.173 Sum_probs=141.1
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCCCChhcHH-------HHHHhhc-CCceEEEEcCCCCCCCCCCCCCCC-------
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYE-------KQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTP------- 207 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~-------~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~------- 207 (451)
+.+.++|...+. +.+++|||+||++.+...|. .++..|. ++|.|+++|+||||.|........
T Consensus 48 ~~~~~~~~~p~~--~~~~~vvl~HG~g~~~~~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~~~~~~~~ 125 (328)
T 1qlw_A 48 DQMYVRYQIPQR--AKRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGKA 125 (328)
T ss_dssp SCEEEEEEEETT--CCSSCEEEECCTTCCGGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHTTSS
T ss_pred eeEEEEEEccCC--CCCccEEEEeCCCCCCCccccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCccccccccccc
Confidence 344555554442 35689999999999999998 4788774 589999999999999975431100
Q ss_pred --CCCCCCchhhhhccc---cCCCCCCcccccc------ccCHHH------------------HHHHHHHHHHHhCCCCE
Q 013006 208 --RSKEGDSTEEKNFLW---GFGDKAQPWASEL------AYSVDL------------------WQDQVCYFIKEVIREPV 258 (451)
Q Consensus 208 --~~~~~~~~~~~~~~w---~~~~~~~~~~~~~------~~s~~~------------------~a~dv~~ll~~l~~~~v 258 (451)
.........+...+| .++. .|.... ...+++ +++++..+++.++ ++
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~--~~ 200 (328)
T 1qlw_A 126 PASSLPDLFAAGHEAAWAIFRFGP---RYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKLD--GT 200 (328)
T ss_dssp CGGGSCCCBCCCHHHHHHHTTSSS---BTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHHT--SE
T ss_pred CcccccceeccchhhhhhHhhhcc---cCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHHhC--Cc
Confidence 000000000000000 0100 000000 001333 7888999998885 99
Q ss_pred EEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHH
Q 013006 259 YVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESI 338 (451)
Q Consensus 259 ~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (451)
+++||||||.+++.+|.++|++|+++|++++..
T Consensus 201 ~lvGhS~GG~~a~~~a~~~p~~v~~~v~~~p~~----------------------------------------------- 233 (328)
T 1qlw_A 201 VLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGE----------------------------------------------- 233 (328)
T ss_dssp EEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSC-----------------------------------------------
T ss_pred eEEEECcccHHHHHHHHhChhheeEEEEeCCCC-----------------------------------------------
Confidence 999999999999999999999999999999741
Q ss_pred HHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCCh-----
Q 013006 339 AEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKP----- 413 (451)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~----- 413 (451)
. ....+. ...+++|+|+++|++|.++|+
T Consensus 234 --------~------------------------------------~~~~~~---~~~~~~PvLii~G~~D~~~p~~~~~~ 266 (328)
T 1qlw_A 234 --------C------------------------------------PKPEDV---KPLTSIPVLVVFGDHIEEFPRWAPRL 266 (328)
T ss_dssp --------C------------------------------------CCGGGC---GGGTTSCEEEEECSSCTTCTTTHHHH
T ss_pred --------C------------------------------------CCHHHH---hhccCCCEEEEeccCCccccchhhHH
Confidence 0 000000 122579999999999999997
Q ss_pred HHHHHHHHHCC----CCcEEEeCCCC-----CCccccC-hHHHHhhh
Q 013006 414 VWGLQVKRQVP----EAPYYEISPAG-----HCPHDEV-PEVCSLCL 450 (451)
Q Consensus 414 ~~~~~l~~~lp----~~~~~~i~~~g-----H~~~~e~-p~~v~~~I 450 (451)
+.++.+.+.++ ++++++++++| |+++.+. |+++++.|
T Consensus 267 ~~~~~~~~~l~~~g~~~~~~~~~~~gi~G~~H~~~~~~~~~~~~~~i 313 (328)
T 1qlw_A 267 KACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLI 313 (328)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCceEEEcCCCCcCCCcccchhccCHHHHHHHH
Confidence 88888888776 78999999665 9999998 99988776
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.88 E-value=5.6e-22 Score=192.78 Aligned_cols=250 Identities=14% Similarity=0.150 Sum_probs=158.8
Q ss_pred CccceeeecCCeEEEEeecCCCC-CCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCC
Q 013006 134 ITSCFWEWKPKFNVHYEKAGCEN-VNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEG 212 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y~~~g~~~-~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~ 212 (451)
+....+...+|.+|++....|.+ .+.|+||++||++++...|..+...+..+|.|+++|+||+|.|...........
T Consensus 82 ~~~~~~~~~~g~~l~~~~~~P~~~~~~p~vv~~HG~g~~~~~~~~~~~~~~~G~~v~~~D~rG~g~s~~~~~~~~~~~-- 159 (346)
T 3fcy_A 82 CYDLYFTGVRGARIHAKYIKPKTEGKHPALIRFHGYSSNSGDWNDKLNYVAAGFTVVAMDVRGQGGQSQDVGGVTGNT-- 159 (346)
T ss_dssp EEEEEEECGGGCEEEEEEEEESCSSCEEEEEEECCTTCCSCCSGGGHHHHTTTCEEEEECCTTSSSSCCCCCCCSSCC--
T ss_pred EEEEEEEcCCCCEEEEEEEecCCCCCcCEEEEECCCCCCCCChhhhhHHHhCCcEEEEEcCCCCCCCCCCCcccCCCC--
Confidence 34455566689999998876542 356899999999999999998887788899999999999999875433210000
Q ss_pred CchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh------CCCCEEEEEeCcchHHHHHHHHhCCCccceEEE
Q 013006 213 DSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV------IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTL 286 (451)
Q Consensus 213 ~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l------~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl 286 (451)
-.....++..+. ...+.+..+.+|+..+++.+ +.++++++|||+||.+++.+|.++|+ |+++|+
T Consensus 160 ---~~~~~~~g~~~~------~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~-v~~~vl 229 (346)
T 3fcy_A 160 ---LNGHIIRGLDDD------ADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR-VRKVVS 229 (346)
T ss_dssp ---SBCSSSTTTTSC------GGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT-CCEEEE
T ss_pred ---cCcceeccccCC------HHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc-ccEEEE
Confidence 001111122111 11256677777777777665 23689999999999999999999998 999999
Q ss_pred eccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccC
Q 013006 287 LNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQH 366 (451)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (451)
++|... ......... ... ... ..+..++.. +..........+...
T Consensus 230 ~~p~~~--------~~~~~~~~~--~~~----~~~--------------~~~~~~~~~-~~~~~~~~~~~~~~~------ 274 (346)
T 3fcy_A 230 EYPFLS--------DYKRVWDLD--LAK----NAY--------------QEITDYFRL-FDPRHERENEVFTKL------ 274 (346)
T ss_dssp ESCSSC--------CHHHHHHTT--CCC----GGG--------------HHHHHHHHH-HCTTCTTHHHHHHHH------
T ss_pred CCCccc--------CHHHHhhcc--ccc----cch--------------HHHHHHHHh-cCCCcchHHHHHHHh------
Confidence 987421 000000000 000 000 001111110 011111111111100
Q ss_pred hhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC-CCcEEEeCCCCCCccccChHH
Q 013006 367 PAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP-EAPYYEISPAGHCPHDEVPEV 445 (451)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp-~~~~~~i~~~gH~~~~e~p~~ 445 (451)
...+....+.++++|+|+++|++|.+++++.+.++.+.++ ++++++++++||..+.+..++
T Consensus 275 ------------------~~~d~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 336 (346)
T 3fcy_A 275 ------------------GYIDVKNLAKRIKGDVLMCVGLMDQVCPPSTVFAAYNNIQSKKDIKVYPDYGHEPMRGFGDL 336 (346)
T ss_dssp ------------------GGGCHHHHGGGCCSEEEEEEETTCSSSCHHHHHHHHTTCCSSEEEEEETTCCSSCCTTHHHH
T ss_pred ------------------CcccHHHHHHhcCCCEEEEeeCCCCcCCHHHHHHHHHhcCCCcEEEEeCCCCCcCHHHHHHH
Confidence 0123334456789999999999999999999999999988 588999999999998544444
Q ss_pred HHh
Q 013006 446 CSL 448 (451)
Q Consensus 446 v~~ 448 (451)
+.+
T Consensus 337 i~~ 339 (346)
T 3fcy_A 337 AMQ 339 (346)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-22 Score=184.48 Aligned_cols=187 Identities=16% Similarity=0.143 Sum_probs=141.3
Q ss_pred cCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEE--cCCCCCCCCCCCCCCCCCCCCCchhhhh
Q 013006 142 KPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAI--DFLGQGMSLPDEDPTPRSKEGDSTEEKN 219 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~--D~rG~G~S~~~~~~~~~~~~~~~~~~~~ 219 (451)
.+|.+++|...|.. +..|+|||+||++++...|..++..|+++|.|+++ |++|+|.|........
T Consensus 22 ~~~~~~~~~~~~~~-~~~~~vv~~HG~~~~~~~~~~~~~~l~~g~~v~~~~~d~~g~g~s~~~~~~~~------------ 88 (226)
T 2h1i_A 22 SNAMMKHVFQKGKD-TSKPVLLLLHGTGGNELDLLPLAEIVDSEASVLSVRGNVLENGMPRFFRRLAE------------ 88 (226)
T ss_dssp HHSSSCEEEECCSC-TTSCEEEEECCTTCCTTTTHHHHHHHHTTSCEEEECCSEEETTEEESSCEEET------------
T ss_pred CCCceeEEecCCCC-CCCcEEEEEecCCCChhHHHHHHHHhccCceEEEecCcccCCcchhhccccCc------------
Confidence 46788999988853 35789999999999999999999999889999999 9999998853211100
Q ss_pred ccccCCCCCCccccccccCHHHHHHHHHH---HH----HHh--CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 220 FLWGFGDKAQPWASELAYSVDLWQDQVCY---FI----KEV--IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 220 ~~w~~~~~~~~~~~~~~~s~~~~a~dv~~---ll----~~l--~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
..++.+++.+++.. ++ +.. +.++++++|||+||.+++.+|.++|++++++|++++.
T Consensus 89 ---------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~ 153 (226)
T 2h1i_A 89 ---------------GIFDEEDLIFRTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPM 153 (226)
T ss_dssp ---------------TEECHHHHHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCC
T ss_pred ---------------cCcChhhHHHHHHHHHHHHHHHHhhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCC
Confidence 01344444444333 33 344 4489999999999999999999999999999999985
Q ss_pred CCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHH
Q 013006 291 PFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAA 370 (451)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (451)
.... +
T Consensus 154 ~~~~----------------------------------------~----------------------------------- 158 (226)
T 2h1i_A 154 VPRR----------------------------------------G----------------------------------- 158 (226)
T ss_dssp CSCS----------------------------------------S-----------------------------------
T ss_pred CCcC----------------------------------------c-----------------------------------
Confidence 3100 0
Q ss_pred HHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC--CcEE-EeCCCCCCccccChHHHH
Q 013006 371 ASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE--APYY-EISPAGHCPHDEVPEVCS 447 (451)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~--~~~~-~i~~~gH~~~~e~p~~v~ 447 (451)
......+++|+++++|++|.+++++..+.+.+.+++ .... +++++||..+.+.++++.
T Consensus 159 -------------------~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~gH~~~~~~~~~~~ 219 (226)
T 2h1i_A 159 -------------------MQLANLAGKSVFIAAGTNDPICSSAESEELKVLLENANANVTMHWENRGHQLTMGEVEKAK 219 (226)
T ss_dssp -------------------CCCCCCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEEEEESSTTSCCHHHHHHHH
T ss_pred -------------------cccccccCCcEEEEeCCCCCcCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCHHHHHHHH
Confidence 000123479999999999999999999998888763 2333 899999999888888776
Q ss_pred hhh
Q 013006 448 LCL 450 (451)
Q Consensus 448 ~~I 450 (451)
+.|
T Consensus 220 ~~l 222 (226)
T 2h1i_A 220 EWY 222 (226)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.88 E-value=4.7e-23 Score=189.88 Aligned_cols=210 Identities=15% Similarity=0.209 Sum_probs=126.2
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAY 237 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 237 (451)
++++|||+||++++...|..+++.|+++|+|+++|+||||.|...
T Consensus 12 ~~~~lv~lhg~g~~~~~~~~~~~~L~~~~~vi~~Dl~GhG~S~~~----------------------------------- 56 (242)
T 2k2q_B 12 EKTQLICFPFAGGYSASFRPLHAFLQGECEMLAAEPPGHGTNQTS----------------------------------- 56 (242)
T ss_dssp CCCEEESSCCCCHHHHHHHHHHHHHCCSCCCEEEECCSSCCSCCC-----------------------------------
T ss_pred CCceEEEECCCCCCHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCC-----------------------------------
Confidence 568999999999999999999999998999999999999999531
Q ss_pred CHHHHHHHHHHHHHHhCC---CCEEEEEeCcchHHHHHHHHh------CCCccceEEEeccCCCCCCCCCCCCchHHhhh
Q 013006 238 SVDLWQDQVCYFIKEVIR---EPVYVVGNSLGGFVAVYFAAC------NPHLVKGVTLLNATPFWGFSPNPIRSPKLARI 308 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l~~---~~v~lvGhS~GG~val~~A~~------~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 308 (451)
..+++.+.+..+++++++ ++++|+||||||.+|+.+|.+ +|++ +++.+..+.. .....
T Consensus 57 ~~~~~~~~~~~~~~~l~~~~~~~~~lvGhSmGG~iA~~~A~~~~~~~~~p~~---v~l~~~~~~~-~~~~~--------- 123 (242)
T 2k2q_B 57 AIEDLEELTDLYKQELNLRPDRPFVLFGHSMGGMITFRLAQKLEREGIFPQA---VIISAIQPPH-IQRKK--------- 123 (242)
T ss_dssp TTTHHHHHHHHTTTTCCCCCCSSCEEECCSSCCHHHHHHHHHHHHHHCSSCS---EEEEEEECSC-CCSCC---------
T ss_pred CcCCHHHHHHHHHHHHHhhcCCCEEEEeCCHhHHHHHHHHHHHHHcCCCCCE---EEEECCCCCC-CCccc---------
Confidence 123444455555566665 689999999999999999987 5654 3443322110 00000
Q ss_pred cCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhH
Q 013006 309 LPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFRE 388 (451)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (451)
.. .... ......+......+... ... ..... ...+.....+... . ...
T Consensus 124 ---~~--~~~~--~~~~~~~~~~~~~~~~~--------------~~~--~~~~~-~~~~~~~~~~~~~-~----~~~--- 171 (242)
T 2k2q_B 124 ---VS--HLPD--DQFLDHIIQLGGMPAEL--------------VEN--KEVMS-FFLPSFRSDYRAL-E----QFE--- 171 (242)
T ss_dssp ---CS--SCTT--HHHHHTTCCTTCCCCTT--------------THH--HHTTT-TCCSCHHHHHHHH-T----CCC---
T ss_pred ---cc--CCCH--HHHHHHHHHhCCCChHH--------------hcC--HHHHH-HHHHHHHHHHHHH-H----hcc---
Confidence 00 0000 00000000000000000 000 00000 0001111111110 0 000
Q ss_pred HhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 389 ALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 389 ~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
...+.++++|+|+|+|++|.+++ .....+.+..++..+++++ +||++++|+|+++++.|
T Consensus 172 -~~~l~~i~~P~lvi~G~~D~~~~-~~~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i 230 (242)
T 2k2q_B 172 -LYDLAQIQSPVHVFNGLDDKKCI-RDAEGWKKWAKDITFHQFD-GGHMFLLSQTEEVAERI 230 (242)
T ss_dssp -CSCCTTCCCSEEEEEECSSCCHH-HHHHHHHTTCCCSEEEEEE-CCCSHHHHHCHHHHHHH
T ss_pred -cCCCCccCCCEEEEeeCCCCcCH-HHHHHHHHHhcCCeEEEEe-CCceeEcCCHHHHHHHH
Confidence 01256789999999999998865 4456677778888888887 59999999999999876
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.88 E-value=4.9e-22 Score=183.90 Aligned_cols=175 Identities=14% Similarity=0.085 Sum_probs=133.9
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcCCceEEEE--cCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAI--DFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASEL 235 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~--D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 235 (451)
+.|+|||+||++++...|..++..|+++|.|+++ |++|+|.|.......... + .
T Consensus 61 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~v~~~~~d~~g~g~s~~~~~~~~~~------------~------------~ 116 (251)
T 2r8b_A 61 GAPLFVLLHGTGGDENQFFDFGARLLPQATILSPVGDVSEHGAARFFRRTGEGV------------Y------------D 116 (251)
T ss_dssp TSCEEEEECCTTCCHHHHHHHHHHHSTTSEEEEECCSEEETTEEESSCBCGGGC------------B------------C
T ss_pred CCcEEEEEeCCCCCHhHHHHHHHhcCCCceEEEecCCcCCCCCcccccCCCCCc------------C------------C
Confidence 5799999999999999999999999888999999 899999875322110000 0 0
Q ss_pred ccCHHHHHHHHHHHH----HHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCC
Q 013006 236 AYSVDLWQDQVCYFI----KEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPW 311 (451)
Q Consensus 236 ~~s~~~~a~dv~~ll----~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (451)
..++.+.++|+.+++ ++++.++++++||||||.+++.+|.++|++++++|++++......
T Consensus 117 ~~~~~~~~~~~~~~l~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~---------------- 180 (251)
T 2r8b_A 117 MVDLERATGKMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP---------------- 180 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC----------------
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc----------------
Confidence 012223344444444 444889999999999999999999999999999999998531000
Q ss_pred CCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhh
Q 013006 312 SGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALS 391 (451)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (451)
..
T Consensus 181 ------------------------------------------------------------------------------~~ 182 (251)
T 2r8b_A 181 ------------------------------------------------------------------------------KI 182 (251)
T ss_dssp ------------------------------------------------------------------------------CC
T ss_pred ------------------------------------------------------------------------------cc
Confidence 00
Q ss_pred hccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC--CCcEE-EeCCCCCCccccChHHHHhhh
Q 013006 392 RCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP--EAPYY-EISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 392 ~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp--~~~~~-~i~~~gH~~~~e~p~~v~~~I 450 (451)
....+++|+|+++|++|.+++++..+++.+.++ +.++. +++++||.++.+.++++.+.|
T Consensus 183 ~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~gH~~~~~~~~~~~~~l 244 (251)
T 2r8b_A 183 SPAKPTRRVLITAGERDPICPVQLTKALEESLKAQGGTVETVWHPGGHEIRSGEIDAVRGFL 244 (251)
T ss_dssp CCCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEEEEESSCSSCCHHHHHHHHHHH
T ss_pred cccccCCcEEEeccCCCccCCHHHHHHHHHHHHHcCCeEEEEecCCCCccCHHHHHHHHHHH
Confidence 012358999999999999999999999999887 56665 788899999999999887765
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.88 E-value=3e-22 Score=186.78 Aligned_cols=177 Identities=14% Similarity=0.062 Sum_probs=137.2
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhcc
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFL 221 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~ 221 (451)
+|..++|...++ +.+.|+|||+||++++...|..++..|++ +|.|+++|+||+|.+....
T Consensus 39 ~~~~l~~p~~~~-~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~~~------------------ 99 (262)
T 1jfr_A 39 GGGTIYYPTSTA-DGTFGAVVISPGFTAYQSSIAWLGPRLASQGFVVFTIDTNTTLDQPDSR------------------ 99 (262)
T ss_dssp CCEEEEEESCCT-TCCEEEEEEECCTTCCGGGTTTHHHHHHTTTCEEEEECCSSTTCCHHHH------------------
T ss_pred CceeEEecCCCC-CCCCCEEEEeCCcCCCchhHHHHHHHHHhCCCEEEEeCCCCCCCCCchh------------------
Confidence 568888887642 23568999999999999999999999954 7999999999999763100
Q ss_pred ccCCCCCCccccccccCHHHHHHHHHH---HHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCC
Q 013006 222 WGFGDKAQPWASELAYSVDLWQDQVCY---FIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPN 298 (451)
Q Consensus 222 w~~~~~~~~~~~~~~~s~~~~a~dv~~---ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~ 298 (451)
..++...++.+.. ++..++.++++|+||||||.+++.+|.++|+ |+++|++++...
T Consensus 100 --------------~~d~~~~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~p~~~------ 158 (262)
T 1jfr_A 100 --------------GRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPLTGWNT------ 158 (262)
T ss_dssp --------------HHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS------
T ss_pred --------------HHHHHHHHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEeecccCc------
Confidence 0122222222222 1224456789999999999999999999997 999999986310
Q ss_pred CCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHh
Q 013006 299 PIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMF 378 (451)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (451)
T Consensus 159 -------------------------------------------------------------------------------- 158 (262)
T 1jfr_A 159 -------------------------------------------------------------------------------- 158 (262)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHH-HHHHHHHCCCC---cEEEeCCCCCCccccChHHHHhhh
Q 013006 379 APQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVW-GLQVKRQVPEA---PYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 379 ~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~-~~~l~~~lp~~---~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
...+.++++|+|+++|++|.+++++. .+++.+.+++. ++++++++||+.+.++++++.+.|
T Consensus 159 -----------~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i 223 (262)
T 1jfr_A 159 -----------DKTWPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSLDKAYLELRGASHFTPNTSDTTIAKYS 223 (262)
T ss_dssp -----------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSCEEEEEETTCCTTGGGSCCHHHHHHH
T ss_pred -----------cccccccCCCEEEEecCccccCCchhhHHHHHHHhhcCCCceEEEeCCCCcCCcccchHHHHHHH
Confidence 11234578999999999999999998 99999988753 889999999999999998887765
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.88 E-value=7.5e-22 Score=179.81 Aligned_cols=191 Identities=15% Similarity=0.140 Sum_probs=136.1
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELA 236 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 236 (451)
..|+|||+||++++...|..++..|++ +|.|+++|.||+|.+..... ....++.+-.. ........
T Consensus 22 ~~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~------------~~~~w~d~~g~-~~~~~~~~ 88 (232)
T 1fj2_A 22 ATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNV------------AMPSWFDIIGL-SPDSQEDE 88 (232)
T ss_dssp CSEEEEEECCSSSCHHHHHHHHHTTCCTTEEEEECCCCEEEEGGGTTE------------EEECSSCBCCC-STTCCBCH
T ss_pred CCceEEEEecCCCccchHHHHHHHHhcCCcEEEecCCCcccccccccc------------ccccccccccC-Cccccccc
Confidence 568999999999999999999999975 89999985555333211000 00000000000 00000112
Q ss_pred cCHHHHHHHHHHHHHHh---CC--CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCC
Q 013006 237 YSVDLWQDQVCYFIKEV---IR--EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPW 311 (451)
Q Consensus 237 ~s~~~~a~dv~~ll~~l---~~--~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (451)
++++++++++.++++.+ ++ ++++++|||+||.+++.+|.++|++|+++|++++.....
T Consensus 89 ~~~~~~~~~~~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~----------------- 151 (232)
T 1fj2_A 89 SGIKQAAENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLR----------------- 151 (232)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTG-----------------
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCC-----------------
Confidence 67899999999999987 65 799999999999999999999999999999999852100
Q ss_pred CCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhh
Q 013006 312 SGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALS 391 (451)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (451)
.. + .. ...
T Consensus 152 -------~~-------------------------~-~~---------------------------------------~~~ 159 (232)
T 1fj2_A 152 -------AS-------------------------F-PQ---------------------------------------GPI 159 (232)
T ss_dssp -------GG-------------------------S-CS---------------------------------------SCC
T ss_pred -------cc-------------------------c-cc---------------------------------------ccc
Confidence 00 0 00 001
Q ss_pred hccCCCCCEEEEeeCCCCCCChHHHHHHHHHC------CCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 392 RCQMNGVPICLIYGKEDPWVKPVWGLQVKRQV------PEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 392 ~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l------p~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
.+..+++|+++++|++|.+++++..+++.+.+ ++.++++++++||..+.+.++++.+.|
T Consensus 160 ~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~H~~~~~~~~~i~~~l 224 (232)
T 1fj2_A 160 GGANRDISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSCQQEMMDVKQFI 224 (232)
T ss_dssp CSTTTTCCEEEEEETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEETTCCSSCCHHHHHHHHHHH
T ss_pred ccccCCCCEEEEecCCCccCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCcccCHHHHHHHHHHH
Confidence 23457899999999999999999888777665 568999999999999887777766543
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=5.8e-22 Score=178.75 Aligned_cols=182 Identities=17% Similarity=0.122 Sum_probs=135.8
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhc---CCceEEEEcCCCC------CCCCCCCCCCCCCCCCCchhhhhccccCCCCC
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLG---KDYRAWAIDFLGQ------GMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKA 228 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~---~~~~Vi~~D~rG~------G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 228 (451)
+.|+|||+||++++...|..++..|+ ++|+|+++|+||. |.+... -....+++...
T Consensus 13 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~---------------w~d~~g~g~~~ 77 (218)
T 1auo_A 13 ADACVIWLHGLGADRYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPS---------------WYDIKAMSPAR 77 (218)
T ss_dssp CSEEEEEECCTTCCTTTTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEEC---------------SSCEEECSSSC
T ss_pred CCcEEEEEecCCCChhhHHHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccc---------------eecCcCCCccc
Confidence 57899999999999999999999997 6899999987742 211000 00000111000
Q ss_pred CccccccccCHHHHHHHHHHHHHHh---CC--CCEEEEEeCcchHHHHHHHH-hCCCccceEEEeccCCCCCCCCCCCCc
Q 013006 229 QPWASELAYSVDLWQDQVCYFIKEV---IR--EPVYVVGNSLGGFVAVYFAA-CNPHLVKGVTLLNATPFWGFSPNPIRS 302 (451)
Q Consensus 229 ~~~~~~~~~s~~~~a~dv~~ll~~l---~~--~~v~lvGhS~GG~val~~A~-~~P~~v~~lvl~~~~~~~~~~~~~~~~ 302 (451)
....++++++++++..+++.+ ++ ++++++|||+||.+++.+|. ++|++++++|++++....
T Consensus 78 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~--------- 144 (218)
T 1auo_A 78 ----SISLEELEVSAKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPT--------- 144 (218)
T ss_dssp ----EECHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTT---------
T ss_pred ----ccchHHHHHHHHHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCC---------
Confidence 011257888999999999987 54 48999999999999999999 999999999999985321
Q ss_pred hHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCC
Q 013006 303 PKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQG 382 (451)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (451)
..+ + .
T Consensus 145 ----------~~~--~-----------------------------~---------------------------------- 149 (218)
T 1auo_A 145 ----------FGD--E-----------------------------L---------------------------------- 149 (218)
T ss_dssp ----------CCT--T-----------------------------C----------------------------------
T ss_pred ----------chh--h-----------------------------h----------------------------------
Confidence 000 0 0
Q ss_pred CCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC----CcEEEeCCCCCCccccChHHHHhhh
Q 013006 383 NLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE----APYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 383 ~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~----~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
.+. ...+++|+++++|++|.+++++..+++.+.+++ +++++++ +||.++.+.++++.+.|
T Consensus 150 ~~~-------~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~~~~~~~~~~l 213 (218)
T 1auo_A 150 ELS-------ASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP-MGHEVLPQEIHDIGAWL 213 (218)
T ss_dssp CCC-------HHHHTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEES-CSSSCCHHHHHHHHHHH
T ss_pred hhh-------hcccCCCEEEEEeCCCceecHHHHHHHHHHHHhCCCceEEEEec-CCCccCHHHHHHHHHHH
Confidence 000 012478999999999999999999999888874 7899999 99999999998887754
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=7.7e-23 Score=190.61 Aligned_cols=183 Identities=10% Similarity=0.026 Sum_probs=136.4
Q ss_pred CCCCcEEEecCC---CCChhcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccc
Q 013006 157 VNSPPVLFLPGF---GVGSFHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWA 232 (451)
Q Consensus 157 ~~~p~VlllHG~---~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 232 (451)
.++|+|||+||. +++...|..++..|+ .||+|+++|+||+|.
T Consensus 61 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~~~~~---------------------------------- 106 (262)
T 2pbl_A 61 TPVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPE---------------------------------- 106 (262)
T ss_dssp SCSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTT----------------------------------
T ss_pred CCCCEEEEEcCcccccCChHHHHHHHHHHHhCCCEEEEeCCCCCCC----------------------------------
Confidence 457899999995 477888999888885 579999999998863
Q ss_pred cccccCHHHHHHHHHHHHHHhCC---CCEEEEEeCcchHHHHHHHHhC------CCccceEEEeccCCCCCCCCCCCCch
Q 013006 233 SELAYSVDLWQDQVCYFIKEVIR---EPVYVVGNSLGGFVAVYFAACN------PHLVKGVTLLNATPFWGFSPNPIRSP 303 (451)
Q Consensus 233 ~~~~~s~~~~a~dv~~ll~~l~~---~~v~lvGhS~GG~val~~A~~~------P~~v~~lvl~~~~~~~~~~~~~~~~~ 303 (451)
+++.++++|+.++++.+.. ++++|+||||||.+++.+|.++ |++|+++|++++.... ..
T Consensus 107 ----~~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~--------~~ 174 (262)
T 2pbl_A 107 ----VRISEITQQISQAVTAAAKEIDGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDL--------RP 174 (262)
T ss_dssp ----SCHHHHHHHHHHHHHHHHHHSCSCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCC--------GG
T ss_pred ----CChHHHHHHHHHHHHHHHHhccCCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCc--------hH
Confidence 3677888898888888754 5999999999999999999998 8999999999975210 00
Q ss_pred HHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCC
Q 013006 304 KLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGN 383 (451)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (451)
... . . .. ..+.. . .....
T Consensus 175 ----~~~---~-----~-----------------~~----~~~~~---~-~~~~~------------------------- 192 (262)
T 2pbl_A 175 ----LLR---T-----S-----------------MN----EKFKM---D-ADAAI------------------------- 192 (262)
T ss_dssp ----GGG---S-----T-----------------TH----HHHCC---C-HHHHH-------------------------
T ss_pred ----HHh---h-----h-----------------hh----hhhCC---C-HHHHH-------------------------
Confidence 000 0 0 00 00000 0 00000
Q ss_pred CchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 384 LSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 384 ~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
.......+.++++|+|+++|++|.+++++.++.+.+.++ +++++++++||+.++|+|++.+..|
T Consensus 193 --~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~H~~~~~~~~~~~~~l 256 (262)
T 2pbl_A 193 --AESPVEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAWD-ADHVIAFEKHHFNVIEPLADPESDL 256 (262)
T ss_dssp --HTCGGGCCCCCSCEEEEEEETTSCHHHHHHHHHHHHHHT-CEEEEETTCCTTTTTGGGGCTTCHH
T ss_pred --hcCcccccCCCCCCEEEEEeCCCCcccHHHHHHHHHHhC-CeEEEeCCCCcchHHhhcCCCCcHH
Confidence 001122345689999999999999999999999999998 9999999999999999888765543
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-21 Score=177.52 Aligned_cols=184 Identities=18% Similarity=0.166 Sum_probs=138.0
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhc---CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccc---cCCCCCCcc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLG---KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLW---GFGDKAQPW 231 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~---~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w---~~~~~~~~~ 231 (451)
+.|+|||+||++++...|..++..|+ ++|.|+++|+||++.+..... ....++ |++...
T Consensus 23 ~~~~vv~lHG~~~~~~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~------------~~~~w~d~~g~g~~~--- 87 (226)
T 3cn9_A 23 ADACIIWLHGLGADRTDFKPVAEALQMVLPSTRFILPQAPSQAVTVNGGW------------VMPSWYDILAFSPAR--- 87 (226)
T ss_dssp CCEEEEEECCTTCCGGGGHHHHHHHHHHCTTEEEEECCCCEEECGGGTSC------------EEECSSCBCCSSSTT---
T ss_pred CCCEEEEEecCCCChHHHHHHHHHHhhcCCCcEEEeecCCCCccccCCCC------------ccccccccccccccc---
Confidence 57899999999999999999999997 789999998886543321100 000000 111100
Q ss_pred ccccccCHHHHHHHHHHHHHHh---CC--CCEEEEEeCcchHHHHHHHH-hCCCccceEEEeccCCCCCCCCCCCCchHH
Q 013006 232 ASELAYSVDLWQDQVCYFIKEV---IR--EPVYVVGNSLGGFVAVYFAA-CNPHLVKGVTLLNATPFWGFSPNPIRSPKL 305 (451)
Q Consensus 232 ~~~~~~s~~~~a~dv~~ll~~l---~~--~~v~lvGhS~GG~val~~A~-~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~ 305 (451)
....++++++++++..+++.+ ++ ++++|+|||+||.+++.+|. ++|++++++|++++....
T Consensus 88 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~------------ 154 (226)
T 3cn9_A 88 -AIDEDQLNASADQVIALIDEQRAKGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPT------------ 154 (226)
T ss_dssp -CBCHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGG------------
T ss_pred -cccchhHHHHHHHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCC------------
Confidence 011267899999999999988 65 58999999999999999999 999999999999974210
Q ss_pred hhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCc
Q 013006 306 ARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLS 385 (451)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (451)
.. . + . +
T Consensus 155 ------------~~-----------------~--------~-~-----------------------------------~- 160 (226)
T 3cn9_A 155 ------------FD-----------------D--------L-A-----------------------------------L- 160 (226)
T ss_dssp ------------GG-----------------G--------C-C-----------------------------------C-
T ss_pred ------------ch-----------------h--------h-h-----------------------------------h-
Confidence 00 0 0 0 0
Q ss_pred hhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC----CCcEEEeCCCCCCccccChHHHHhhh
Q 013006 386 FREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP----EAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 386 ~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp----~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
....+++|+++++|++|.++|++..+++.+.++ ++++++++ +||.++.+.++++.+.|
T Consensus 161 ------~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~~~~~~i~~~l 222 (226)
T 3cn9_A 161 ------DERHKRIPVLHLHGSQDDVVDPALGRAAHDALQAQGVEVGWHDYP-MGHEVSLEEIHDIGAWL 222 (226)
T ss_dssp ------CTGGGGCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEES-CCSSCCHHHHHHHHHHH
T ss_pred ------cccccCCCEEEEecCCCCccCHHHHHHHHHHHHHcCCceeEEEec-CCCCcchhhHHHHHHHH
Confidence 002457899999999999999999998888876 57899999 99999999888877654
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.87 E-value=9.5e-22 Score=187.57 Aligned_cols=201 Identities=16% Similarity=0.126 Sum_probs=136.9
Q ss_pred CCCcEEEecCCCCCh--hcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccc
Q 013006 158 NSPPVLFLPGFGVGS--FHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASEL 235 (451)
Q Consensus 158 ~~p~VlllHG~~~~~--~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 235 (451)
++++|||+||++++. ..|..++..|..+|+|+++|+||||.|+...
T Consensus 66 ~~~~lvllhG~~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~-------------------------------- 113 (300)
T 1kez_A 66 GEVTVICCAGTAAISGPHEFTRLAGALRGIAPVRAVPQPGYEEGEPLP-------------------------------- 113 (300)
T ss_dssp CSSEEEECCCSSTTCSTTTTHHHHHHTSSSCCBCCCCCTTSSTTCCBC--------------------------------
T ss_pred CCCeEEEECCCcccCcHHHHHHHHHhcCCCceEEEecCCCCCCCCCCC--------------------------------
Confidence 568999999999977 9999999999888999999999999986421
Q ss_pred ccCHHHHHHHHH-HHHHHhCCCCEEEEEeCcchHHHHHHHHhCC---CccceEEEeccCCCCCCCCCCCCchHHhhhcCC
Q 013006 236 AYSVDLWQDQVC-YFIKEVIREPVYVVGNSLGGFVAVYFAACNP---HLVKGVTLLNATPFWGFSPNPIRSPKLARILPW 311 (451)
Q Consensus 236 ~~s~~~~a~dv~-~ll~~l~~~~v~lvGhS~GG~val~~A~~~P---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (451)
++++++++++. .+++.++.++++|+||||||.+++.+|.++| ++|+++|++++.+... .
T Consensus 114 -~~~~~~a~~~~~~l~~~~~~~~~~LvGhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~-------~--------- 176 (300)
T 1kez_A 114 -SSMAAVAAVQADAVIRTQGDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGH-------Q--------- 176 (300)
T ss_dssp -SSHHHHHHHHHHHHHHHCSSCCEEEECCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTT-------C---------
T ss_pred -CCHHHHHHHHHHHHHHhcCCCCEEEEEECHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcc-------h---------
Confidence 69999999988 5667788899999999999999999999998 4899999999853210 0
Q ss_pred CCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhh
Q 013006 312 SGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALS 391 (451)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (451)
.....+...+ ...++........... ...+..+..... . .
T Consensus 177 -------~~~~~~~~~~-------------~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~-~-------~ 216 (300)
T 1kez_A 177 -------DAMNAWLEEL-------------TATLFDRETVRMDDTR------------LTALGAYDRLTG-Q-------W 216 (300)
T ss_dssp -------HHHHHHHHHH-------------HGGGCCCCSSCCCHHH------------HHHHHHHHHHTT-T-------C
T ss_pred -------hHHHHHHHHH-------------HHHHHhCcCCccchHH------------HHHHHHHHHHHh-c-------C
Confidence 0111111000 0111111000000000 000111110000 0 0
Q ss_pred hccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC-CCcEEEeCCCCCCccc-cChHHHHhhh
Q 013006 392 RCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP-EAPYYEISPAGHCPHD-EVPEVCSLCL 450 (451)
Q Consensus 392 ~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp-~~~~~~i~~~gH~~~~-e~p~~v~~~I 450 (451)
....+++|+|+|+|+ |..+++.. ..+.+.++ +.+++++++ ||++++ ++|+++++.|
T Consensus 217 ~~~~i~~P~lii~G~-d~~~~~~~-~~~~~~~~~~~~~~~i~g-gH~~~~~e~~~~~~~~i 274 (300)
T 1kez_A 217 RPRETGLPTLLVSAG-EPMGPWPD-DSWKPTWPFEHDTVAVPG-DHFTMVQEHADAIARHI 274 (300)
T ss_dssp CCCCCSCCBEEEEES-SCSSCCCS-SCCSCCCSSCCEEEEESS-CTTTSSSSCSHHHHHHH
T ss_pred CCCCCCCCEEEEEeC-CCCCCCcc-cchhhhcCCCCeEEEecC-CChhhccccHHHHHHHH
Confidence 236789999999995 55665543 34555556 478999998 999997 9999998876
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-20 Score=170.73 Aligned_cols=184 Identities=14% Similarity=0.032 Sum_probs=136.1
Q ss_pred ccceeeecCCeEEEEeecCCCCC---CCCcEEEecCCC---C--ChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCC
Q 013006 135 TSCFWEWKPKFNVHYEKAGCENV---NSPPVLFLPGFG---V--GSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDP 205 (451)
Q Consensus 135 ~~~~~~~~~g~~l~y~~~g~~~~---~~p~VlllHG~~---~--~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~ 205 (451)
+...+...+| ++.+..+.+.+. +.|+|||+||++ + ....|..++..|++ +|.|+++|+||+|.|.....
T Consensus 11 ~~~~~~~~~g-~~~~~~~~p~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~- 88 (220)
T 2fuk_A 11 AALTLDGPVG-PLDVAVDLPEPDVAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSFD- 88 (220)
T ss_dssp EEEEEEETTE-EEEEEEECCCTTSCCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSCCC-
T ss_pred eEEEEeCCCC-eEEEEEEeCCCCCccccCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecCCCCCCCCCcc-
Confidence 3445566777 677666555432 368999999953 2 33457888888865 79999999999999964321
Q ss_pred CCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh----CCCCEEEEEeCcchHHHHHHHHhCCCcc
Q 013006 206 TPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV----IREPVYVVGNSLGGFVAVYFAACNPHLV 281 (451)
Q Consensus 206 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l----~~~~v~lvGhS~GG~val~~A~~~P~~v 281 (451)
.....++|+.++++.+ +.++++++|||+||.+++.++.++ +|
T Consensus 89 --------------------------------~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~v 134 (220)
T 2fuk_A 89 --------------------------------HGDGEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL--EP 134 (220)
T ss_dssp --------------------------------TTTHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH--CC
T ss_pred --------------------------------cCchhHHHHHHHHHHHHhcCCCCcEEEEEECHHHHHHHHHHhhc--cc
Confidence 1123444555555444 456899999999999999999988 89
Q ss_pred ceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHH
Q 013006 282 KGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRIL 361 (451)
Q Consensus 282 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (451)
+++|++++......
T Consensus 135 ~~~v~~~~~~~~~~------------------------------------------------------------------ 148 (220)
T 2fuk_A 135 QVLISIAPPAGRWD------------------------------------------------------------------ 148 (220)
T ss_dssp SEEEEESCCBTTBC------------------------------------------------------------------
T ss_pred cEEEEecccccchh------------------------------------------------------------------
Confidence 99999998632000
Q ss_pred hhccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHC-CCCcEEEeCCCCCCccc
Q 013006 362 ETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQV-PEAPYYEISPAGHCPHD 440 (451)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l-p~~~~~~i~~~gH~~~~ 440 (451)
...+. ..+|+++++|++|.+++++..+++.+.+ +++++++++++||+++.
T Consensus 149 ----------------------------~~~~~-~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 199 (220)
T 2fuk_A 149 ----------------------------FSDVQ-PPAQWLVIQGDADEIVDPQAVYDWLETLEQQPTLVRMPDTSHFFHR 199 (220)
T ss_dssp ----------------------------CTTCC-CCSSEEEEEETTCSSSCHHHHHHHHTTCSSCCEEEEETTCCTTCTT
T ss_pred ----------------------------hhhcc-cCCcEEEEECCCCcccCHHHHHHHHHHhCcCCcEEEeCCCCceehh
Confidence 00011 2679999999999999999999999998 78999999999999888
Q ss_pred cChHHHHhhh
Q 013006 441 EVPEVCSLCL 450 (451)
Q Consensus 441 e~p~~v~~~I 450 (451)
+ ++++.+.|
T Consensus 200 ~-~~~~~~~i 208 (220)
T 2fuk_A 200 K-LIDLRGAL 208 (220)
T ss_dssp C-HHHHHHHH
T ss_pred h-HHHHHHHH
Confidence 4 77776654
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.86 E-value=8.5e-21 Score=187.52 Aligned_cols=223 Identities=16% Similarity=0.049 Sum_probs=152.0
Q ss_pred CccceeeecCCeEEEEeecCCCC-CCCCcEEEecCCCCChhcHHHHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCC
Q 013006 134 ITSCFWEWKPKFNVHYEKAGCEN-VNSPPVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKE 211 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y~~~g~~~-~~~p~VlllHG~~~~~~~~~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~ 211 (451)
++...+.. +|.+|.+....+.+ .+.|+||++||++++...|......| .+||.|+++|+||+|.|......
T Consensus 127 ~~~v~~~~-dg~~i~~~l~~p~~~~~~P~vl~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~G~s~~~~~~------ 199 (386)
T 2jbw_A 127 AERHELVV-DGIPMPVYVRIPEGPGPHPAVIMLGGLESTKEESFQMENLVLDRGMATATFDGPGQGEMFEYKRI------ 199 (386)
T ss_dssp EEEEEEEE-TTEEEEEEEECCSSSCCEEEEEEECCSSCCTTTTHHHHHHHHHTTCEEEEECCTTSGGGTTTCCS------
T ss_pred eEEEEEEe-CCEEEEEEEEcCCCCCCCCEEEEeCCCCccHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCC------
Confidence 34444444 89999988876643 34588999999998888776666666 56899999999999998321111
Q ss_pred CCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHH---hCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEec
Q 013006 212 GDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKE---VIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLN 288 (451)
Q Consensus 212 ~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~---l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~ 288 (451)
.+++++.+.++.+++.+ ++.++++|+|||+||.+++.+|.+ |++|+++|++
T Consensus 200 ------------------------~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~-~~~~~a~v~~- 253 (386)
T 2jbw_A 200 ------------------------AGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC-EPRLAACISW- 253 (386)
T ss_dssp ------------------------CSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH-CTTCCEEEEE-
T ss_pred ------------------------CccHHHHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcC-CcceeEEEEe-
Confidence 16788888899888888 566899999999999999999999 8899999999
Q ss_pred cCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChh
Q 013006 289 ATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPA 368 (451)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (451)
+...+... . . ..+... .......+.. ..........+.
T Consensus 254 ~~~~~~~~-----~----~--------~~~~~~-----------------~~~~~~~~g~--~~~~~~~~~~~~------ 291 (386)
T 2jbw_A 254 GGFSDLDY-----W----D--------LETPLT-----------------KESWKYVSKV--DTLEEARLHVHA------ 291 (386)
T ss_dssp SCCSCSTT-----G----G--------GSCHHH-----------------HHHHHHHTTC--SSHHHHHHHHHH------
T ss_pred ccCChHHH-----H----H--------hccHHH-----------------HHHHHHHhCC--CCHHHHHHHHHH------
Confidence 64321100 0 0 001111 0111111111 000111100000
Q ss_pred HHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHC-C-CCcEEEeCCCCCCccccChHHH
Q 013006 369 AAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQV-P-EAPYYEISPAGHCPHDEVPEVC 446 (451)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l-p-~~~~~~i~~~gH~~~~e~p~~v 446 (451)
. .+....+.++++|+|+++|++|. ++++.++++.+.+ + ++++++++++||+. .++++++
T Consensus 292 ----------~-------~~~~~~~~~i~~P~Lii~G~~D~-v~~~~~~~l~~~l~~~~~~~~~~~~~gH~~-~~~~~~~ 352 (386)
T 2jbw_A 292 ----------A-------LETRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPAEHLNLVVEKDGDHCC-HNLGIRP 352 (386)
T ss_dssp ----------H-------TCCTTTGGGCCSCEEEEEETTSS-SCTHHHHHHHHHSCGGGEEEEEETTCCGGG-GGGTTHH
T ss_pred ----------h-------CChhhhhcccCCCEEEEECCCCC-CCHHHHHHHHHHhcCCCcEEEEeCCCCcCC-ccchHHH
Confidence 0 01123356689999999999999 9999999999999 7 78999999999975 5677777
Q ss_pred Hhhh
Q 013006 447 SLCL 450 (451)
Q Consensus 447 ~~~I 450 (451)
.+.|
T Consensus 353 ~~~i 356 (386)
T 2jbw_A 353 RLEM 356 (386)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.8e-20 Score=180.41 Aligned_cols=205 Identities=15% Similarity=0.079 Sum_probs=137.5
Q ss_pred CCCcEEEecCC--CCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccc
Q 013006 158 NSPPVLFLPGF--GVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASEL 235 (451)
Q Consensus 158 ~~p~VlllHG~--~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 235 (451)
++|+|||+||+ +++...|..++..|..+|+|+++|+||||.|....
T Consensus 80 ~~~~lv~lhG~~~~~~~~~~~~~~~~L~~~~~v~~~d~~G~G~~~~~~-------------------------------- 127 (319)
T 3lcr_A 80 LGPQLILVCPTVMTTGPQVYSRLAEELDAGRRVSALVPPGFHGGQALP-------------------------------- 127 (319)
T ss_dssp SSCEEEEECCSSTTCSGGGGHHHHHHHCTTSEEEEEECTTSSTTCCEE--------------------------------
T ss_pred CCCeEEEECCCCcCCCHHHHHHHHHHhCCCceEEEeeCCCCCCCCCCC--------------------------------
Confidence 57899999996 67889999999999889999999999999875321
Q ss_pred ccCHHHHHHHHHHHHHHh-CCCCEEEEEeCcchHHHHHHHHhC---CCccceEEEeccCCCCCCCCCCCCchHHhhhcCC
Q 013006 236 AYSVDLWQDQVCYFIKEV-IREPVYVVGNSLGGFVAVYFAACN---PHLVKGVTLLNATPFWGFSPNPIRSPKLARILPW 311 (451)
Q Consensus 236 ~~s~~~~a~dv~~ll~~l-~~~~v~lvGhS~GG~val~~A~~~---P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (451)
.+++++++++.++++.+ +.++++|+||||||.+++.+|.++ |++|+++|++++.+.... .
T Consensus 128 -~~~~~~~~~~~~~l~~~~~~~~~~lvGhS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~-------~-------- 191 (319)
T 3lcr_A 128 -ATLTVLVRSLADVVQAEVADGEFALAGHSSGGVVAYEVARELEARGLAPRGVVLIDSYSFDGD-------G-------- 191 (319)
T ss_dssp -SSHHHHHHHHHHHHHHHHTTSCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSS-------C--------
T ss_pred -CCHHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCcc-------c--------
Confidence 58999999999998887 558999999999999999999988 889999999998642100 0
Q ss_pred CCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHH--hhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHH
Q 013006 312 SGTFPLPASVRKLIEFIWQKISDPESIAEVLKQV--YADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREA 389 (451)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (451)
.....+...+. ....... +... ......+. .+..+..... .+
T Consensus 192 -------~~~~~~~~~~~---------~~~~~~~~~~~~~-~~~~~~l~-------------~~~~~~~~~~-~~----- 235 (319)
T 3lcr_A 192 -------GRPEELFRSAL---------NERFVEYLRLTGG-GNLSQRIT-------------AQVWCLELLR-GW----- 235 (319)
T ss_dssp -------CHHHHHHHHHH---------HHHHHHHHHHHCC-CCHHHHHH-------------HHHHHHHHTT-TC-----
T ss_pred -------hhhHHHHHHHH---------HHHHhhhhcccCC-CchhHHHH-------------HHHHHHHHHh-cC-----
Confidence 00011110000 0000000 0000 00011111 1111111100 00
Q ss_pred hhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC-CcEEEeCCCCCCcccc--ChHHHHhhh
Q 013006 390 LSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE-APYYEISPAGHCPHDE--VPEVCSLCL 450 (451)
Q Consensus 390 ~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~-~~~~~i~~~gH~~~~e--~p~~v~~~I 450 (451)
....+++|+|+|+|++ ..+++.....+.+.+++ .++++++ ++|+.+++ +|+++++.|
T Consensus 236 --~~~~i~~PvLli~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~-g~H~~~~~~~~~~~va~~i 295 (319)
T 3lcr_A 236 --RPEGLTAPTLYVRPAQ-PLVEQEKPEWRGDVLAAMGQVVEAP-GDHFTIIEGEHVASTAHIV 295 (319)
T ss_dssp --CCCCCSSCEEEEEESS-CSSSCCCTHHHHHHHHTCSEEEEES-SCTTGGGSTTTHHHHHHHH
T ss_pred --CCCCcCCCEEEEEeCC-CCCCcccchhhhhcCCCCceEEEeC-CCcHHhhCcccHHHHHHHH
Confidence 1256899999999998 45665666667776665 6677776 58988886 999999876
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.85 E-value=5.6e-21 Score=179.23 Aligned_cols=198 Identities=12% Similarity=0.059 Sum_probs=135.5
Q ss_pred CCCcEEEecCCC-----CChhcHHHHHHhh-----cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCC
Q 013006 158 NSPPVLFLPGFG-----VGSFHYEKQLKDL-----GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDK 227 (451)
Q Consensus 158 ~~p~VlllHG~~-----~~~~~~~~~~~~L-----~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~ 227 (451)
..|+|||+||.+ .+...|..++..| ..+|+|+++|+|+.+....+
T Consensus 40 ~~p~vv~lHGgg~~~g~~~~~~~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~~~~------------------------- 94 (273)
T 1vkh_A 40 TREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEITNP------------------------- 94 (273)
T ss_dssp CCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSCTT-------------------------
T ss_pred CCeEEEEECCCcccCCcCChHHHHHHHHHHhhhhccCCcEEEEeecccCCCCCCC-------------------------
Confidence 568999999955 4677899999988 56899999999987654211
Q ss_pred CCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhC-----------------CCccceEEEeccC
Q 013006 228 AQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACN-----------------PHLVKGVTLLNAT 290 (451)
Q Consensus 228 ~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~-----------------P~~v~~lvl~~~~ 290 (451)
..++++.+.+..+++.++.++++|+||||||.+++.+|.++ |++|+++|++++.
T Consensus 95 ---------~~~~d~~~~~~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~ 165 (273)
T 1vkh_A 95 ---------RNLYDAVSNITRLVKEKGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGI 165 (273)
T ss_dssp ---------HHHHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCC
T ss_pred ---------cHHHHHHHHHHHHHHhCCcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeeccc
Confidence 46788888899999999999999999999999999999986 8899999999874
Q ss_pred CCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHH
Q 013006 291 PFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAA 370 (451)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (451)
.. ...... . .+ ....++...+......... ...
T Consensus 166 ~~---------~~~~~~----------------------~---~~-~~~~~~~~~~~~~~~~~~~----------~~~-- 198 (273)
T 1vkh_A 166 YS---------LKELLI----------------------E---YP-EYDCFTRLAFPDGIQMYEE----------EPS-- 198 (273)
T ss_dssp CC---------HHHHHH----------------------H---CG-GGHHHHHHHCTTCGGGCCC----------CHH--
T ss_pred cc---------HHHhhh----------------------h---cc-cHHHHHHHHhcccccchhh----------ccc--
Confidence 21 000000 0 00 0011111111000000000 000
Q ss_pred HHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC----CCcEEEeCCCCCCccccChHHH
Q 013006 371 ASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP----EAPYYEISPAGHCPHDEVPEVC 446 (451)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp----~~~~~~i~~~gH~~~~e~p~~v 446 (451)
.... .....+..+++|+|+++|++|.++|++.++.+.+.++ ++++++++++||..++++ +++
T Consensus 199 -~~~~------------~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~-~~~ 264 (273)
T 1vkh_A 199 -RVMP------------YVKKALSRFSIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDDLGLHNDVYKN-GKV 264 (273)
T ss_dssp -HHHH------------HHHHHHHHHTCEEEEEEETTCSSCCTHHHHHHHHHHHHTTCCEEEEEECCCSGGGGGGC-HHH
T ss_pred -ccCh------------hhhhcccccCCCEEEEecCCcCCCChHHHHHHHHHHHhcCCceEEEEeCCCcccccccC-hHH
Confidence 0000 0001122368999999999999999999988887765 478999999999999999 777
Q ss_pred Hhhh
Q 013006 447 SLCL 450 (451)
Q Consensus 447 ~~~I 450 (451)
++.|
T Consensus 265 ~~~i 268 (273)
T 1vkh_A 265 AKYI 268 (273)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6655
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.9e-20 Score=177.31 Aligned_cols=245 Identities=11% Similarity=0.007 Sum_probs=149.9
Q ss_pred CccceeeecCCeEEEEeecCCCC-CCCCcEEEecCCCCC-hhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCC
Q 013006 134 ITSCFWEWKPKFNVHYEKAGCEN-VNSPPVLFLPGFGVG-SFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKE 211 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y~~~g~~~-~~~p~VlllHG~~~~-~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~ 211 (451)
.....+...+|.++++....+.+ .+.|+||++||++++ ...|......+.++|.|+++|+||+|.|..........
T Consensus 56 ~~~~~~~~~~g~~i~~~~~~P~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~rg~g~s~~~~~~~~~~-- 133 (318)
T 1l7a_A 56 VYRLTYKSFGNARITGWYAVPDKEGPHPAIVKYHGYNASYDGEIHEMVNWALHGYATFGMLVRGQQRSEDTSISPHGH-- 133 (318)
T ss_dssp EEEEEEEEGGGEEEEEEEEEESSCSCEEEEEEECCTTCCSGGGHHHHHHHHHTTCEEEEECCTTTSSSCCCCCCSSCC--
T ss_pred EEEEEEEccCCCEEEEEEEeeCCCCCccEEEEEcCCCCCCCCCcccccchhhCCcEEEEecCCCCCCCCCcccccCCc--
Confidence 33445555688888877665532 345889999999999 88888877555679999999999999997543211000
Q ss_pred CCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhC------CCCEEEEEeCcchHHHHHHHHhCCCccceEE
Q 013006 212 GDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI------REPVYVVGNSLGGFVAVYFAACNPHLVKGVT 285 (451)
Q Consensus 212 ~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~------~~~v~lvGhS~GG~val~~A~~~P~~v~~lv 285 (451)
......++..+ ...+.+...++|+.++++.+. .++++++|||+||.+++.+|.++|+ ++++|
T Consensus 134 ----~~~~~~~~~~~-------~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~-~~~~v 201 (318)
T 1l7a_A 134 ----ALGWMTKGILD-------KDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAV 201 (318)
T ss_dssp ----SSSSTTTTTTC-------TTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEE
T ss_pred ----cccceeccCCC-------HHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC-ccEEE
Confidence 00111111111 112456777788877777663 2689999999999999999999985 88888
Q ss_pred EeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhcc
Q 013006 286 LLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQ 365 (451)
Q Consensus 286 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (451)
++++... .......... .... ..+..++... .
T Consensus 202 ~~~p~~~--------~~~~~~~~~~---~~~~------------------~~~~~~~~~~-------------------~ 233 (318)
T 1l7a_A 202 ADYPYLS--------NFERAIDVAL---EQPY------------------LEINSFFRRN-------------------G 233 (318)
T ss_dssp EESCCSC--------CHHHHHHHCC---STTT------------------THHHHHHHHS-------------------C
T ss_pred ecCCccc--------CHHHHHhcCC---cCcc------------------HHHHHHHhcc-------------------C
Confidence 8776310 0000000000 0000 0000111000 0
Q ss_pred ChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC-CcEEEeCCCCCCccccChH
Q 013006 366 HPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE-APYYEISPAGHCPHDEVPE 444 (451)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~-~~~~~i~~~gH~~~~e~p~ 444 (451)
.+.....+..... . .+....+.++++|+|+++|++|.+++++..+.+.+.+++ +++++++++||....+..+
T Consensus 234 ~~~~~~~~~~~~~----~---~~~~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~~~~~~~~ 306 (318)
T 1l7a_A 234 SPETEVQAMKTLS----Y---FDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLETKKELKVYRYFGHEYIPAFQT 306 (318)
T ss_dssp CHHHHHHHHHHHH----T---TCHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCSSCCHHHHH
T ss_pred CcccHHHHHHhhc----c---ccHHHHHhhCCCCEEEEeccCCCCCCcccHHHHHhhcCCCeeEEEccCCCCCCcchhHH
Confidence 0000000000000 0 122334566789999999999999999999999999986 7899999999995544444
Q ss_pred HHH
Q 013006 445 VCS 447 (451)
Q Consensus 445 ~v~ 447 (451)
++.
T Consensus 307 ~~~ 309 (318)
T 1l7a_A 307 EKL 309 (318)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.85 E-value=4e-21 Score=172.90 Aligned_cols=184 Identities=17% Similarity=0.127 Sum_probs=129.0
Q ss_pred eEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEc-------------CCCCCCCCCCCCCCCCCCC
Q 013006 145 FNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAID-------------FLGQGMSLPDEDPTPRSKE 211 (451)
Q Consensus 145 ~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D-------------~rG~G~S~~~~~~~~~~~~ 211 (451)
..+.|....+.+++.| |||+||++++...|..++..|+.++.|+++| ++|+|.+......
T Consensus 3 ~~~~~~~~~~~~~~~p-vv~lHG~g~~~~~~~~~~~~l~~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~------ 75 (209)
T 3og9_A 3 HMTDYVFKAGRKDLAP-LLLLHSTGGDEHQLVEIAEMIAPSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFD------ 75 (209)
T ss_dssp -CCCEEEECCCTTSCC-EEEECCTTCCTTTTHHHHHHHSTTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBC------
T ss_pred CcceEEEeCCCCCCCC-EEEEeCCCCCHHHHHHHHHhcCCCceEEEecCCcCCCCcccceecccccccccCCCC------
Confidence 3444444443334567 9999999999999999999999899999999 5666654321000
Q ss_pred CCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhCCCccceEEEecc
Q 013006 212 GDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNA 289 (451)
Q Consensus 212 ~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~ 289 (451)
........+++.+.+..+.+..++ ++++|+||||||.+++.+|.++|++++++|++++
T Consensus 76 --------------------~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~ 135 (209)
T 3og9_A 76 --------------------LESLDEETDWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHG 135 (209)
T ss_dssp --------------------HHHHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESC
T ss_pred --------------------HHHHHHHHHHHHHHHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECC
Confidence 001112333334444444455566 7899999999999999999999999999999997
Q ss_pred CCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhH
Q 013006 290 TPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAA 369 (451)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (451)
.... ..
T Consensus 136 ~~~~------------------------------------------------------~~-------------------- 141 (209)
T 3og9_A 136 MQLE------------------------------------------------------DF-------------------- 141 (209)
T ss_dssp CCCC------------------------------------------------------CC--------------------
T ss_pred CCCC------------------------------------------------------cc--------------------
Confidence 4210 00
Q ss_pred HHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC----CcEEEeCCCCCCccccChHH
Q 013006 370 AASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE----APYYEISPAGHCPHDEVPEV 445 (451)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~----~~~~~i~~~gH~~~~e~p~~ 445 (451)
.......++|+++++|++|+++|++.++++.+.+++ +++++++ +||.+..+..++
T Consensus 142 --------------------~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~-~gH~~~~~~~~~ 200 (209)
T 3og9_A 142 --------------------EQTVQLDDKHVFLSYAPNDMIVPQKNFGDLKGDLEDSGCQLEIYESS-LGHQLTQEEVLA 200 (209)
T ss_dssp --------------------CCCCCCTTCEEEEEECTTCSSSCHHHHHHHHHHHHHTTCEEEEEECS-STTSCCHHHHHH
T ss_pred --------------------cccccccCCCEEEEcCCCCCccCHHHHHHHHHHHHHcCCceEEEEcC-CCCcCCHHHHHH
Confidence 000123578999999999999999988888776643 4667776 799988777776
Q ss_pred HHhhh
Q 013006 446 CSLCL 450 (451)
Q Consensus 446 v~~~I 450 (451)
+.+.|
T Consensus 201 ~~~~l 205 (209)
T 3og9_A 201 AKKWL 205 (209)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66543
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.85 E-value=7.6e-20 Score=178.57 Aligned_cols=123 Identities=16% Similarity=0.071 Sum_probs=95.0
Q ss_pred ceeeecCCeEEEEeecCCCC---CCCCcEEEecCCCCChhcHHH-HHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCC
Q 013006 137 CFWEWKPKFNVHYEKAGCEN---VNSPPVLFLPGFGVGSFHYEK-QLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKE 211 (451)
Q Consensus 137 ~~~~~~~g~~l~y~~~g~~~---~~~p~VlllHG~~~~~~~~~~-~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~ 211 (451)
..+...||.++++..+.|.+ ...|+||++||++++...|.. +...|+ +||.|+++|+||+|.|.......
T Consensus 71 ~~~~~~~g~~~~~~~~~p~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~----- 145 (367)
T 2hdw_A 71 VTFANRYGITLAADLYLPKNRGGDRLPAIVIGGPFGAVKEQSSGLYAQTMAERGFVTLAFDPSYTGESGGQPRNV----- 145 (367)
T ss_dssp EEEECTTSCEEEEEEEEESSCCSSCEEEEEEECCTTCCTTSHHHHHHHHHHHTTCEEEEECCTTSTTSCCSSSSC-----
T ss_pred EEEecCCCCEEEEEEEeCCCCCCCCCCEEEEECCCCCcchhhHHHHHHHHHHCCCEEEEECCCCcCCCCCcCccc-----
Confidence 34445578888887664432 345789999999999988875 777775 47999999999999986432210
Q ss_pred CCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh------CCCCEEEEEeCcchHHHHHHHHhCCCccceEE
Q 013006 212 GDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV------IREPVYVVGNSLGGFVAVYFAACNPHLVKGVT 285 (451)
Q Consensus 212 ~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l------~~~~v~lvGhS~GG~val~~A~~~P~~v~~lv 285 (451)
.+.+..++|+.++++.+ +.++++++|||+||.+++.+|.++| +|+++|
T Consensus 146 -------------------------~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v 199 (367)
T 2hdw_A 146 -------------------------ASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-RVKAVV 199 (367)
T ss_dssp -------------------------CCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEE
T ss_pred -------------------------cchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-CccEEE
Confidence 24666777777777766 2468999999999999999999998 699999
Q ss_pred EeccC
Q 013006 286 LLNAT 290 (451)
Q Consensus 286 l~~~~ 290 (451)
++++.
T Consensus 200 ~~~p~ 204 (367)
T 2hdw_A 200 TSTMY 204 (367)
T ss_dssp EESCC
T ss_pred Eeccc
Confidence 99864
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.85 E-value=4.3e-21 Score=174.21 Aligned_cols=190 Identities=16% Similarity=0.110 Sum_probs=136.4
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccc
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLW 222 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w 222 (451)
++..++|....+.++.+|+|||+||++++...|..+...|++++.|+++|.+++..... . ++
T Consensus 14 ~~~~l~~~~~~~~~~~~p~vv~lHG~g~~~~~~~~~~~~l~~~~~vv~~d~~~~~~~g~--~----------------~~ 75 (223)
T 3b5e_A 14 TDLAFPYRLLGAGKESRECLFLLHGSGVDETTLVPLARRIAPTATLVAARGRIPQEDGF--R----------------WF 75 (223)
T ss_dssp CSSSSCEEEESTTSSCCCEEEEECCTTBCTTTTHHHHHHHCTTSEEEEECCSEEETTEE--E----------------SS
T ss_pred cCCCceEEEeCCCCCCCCEEEEEecCCCCHHHHHHHHHhcCCCceEEEeCCCCCcCCcc--c----------------cc
Confidence 35566777666554456999999999999999999999998899999999887421100 0 00
Q ss_pred cCCCCCCccccccccCHHHHHHHHHHHHHHh----CC--CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCC
Q 013006 223 GFGDKAQPWASELAYSVDLWQDQVCYFIKEV----IR--EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFS 296 (451)
Q Consensus 223 ~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l----~~--~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~ 296 (451)
+..... .....++.+.++++.++++.+ ++ ++++|+||||||.+++.+|.++|++++++|++++....
T Consensus 76 ~~~~~~----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~--- 148 (223)
T 3b5e_A 76 ERIDPT----RFEQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVL--- 148 (223)
T ss_dssp CEEETT----EECHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCC---
T ss_pred cccCCC----cccHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCc---
Confidence 000000 000134555666666666654 44 78999999999999999999999999999999975210
Q ss_pred CCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHH
Q 013006 297 PNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASI 376 (451)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (451)
. ..
T Consensus 149 -------------------------------------~-------------~~--------------------------- 151 (223)
T 3b5e_A 149 -------------------------------------D-------------HV--------------------------- 151 (223)
T ss_dssp -------------------------------------S-------------SC---------------------------
T ss_pred -------------------------------------c-------------cc---------------------------
Confidence 0 00
Q ss_pred HhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC----CCcEEEeCCCCCCccccChHHHHhhh
Q 013006 377 MFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP----EAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 377 ~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp----~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
.....+++|+++++|++|.++|++.++ +.+.++ ++++++++ +||.+..+.++++.+.|
T Consensus 152 --------------~~~~~~~~P~li~~G~~D~~v~~~~~~-~~~~l~~~g~~~~~~~~~-~gH~~~~~~~~~i~~~l 213 (223)
T 3b5e_A 152 --------------PATDLAGIRTLIIAGAADETYGPFVPA-LVTLLSRHGAEVDARIIP-SGHDIGDPDAAIVRQWL 213 (223)
T ss_dssp --------------CCCCCTTCEEEEEEETTCTTTGGGHHH-HHHHHHHTTCEEEEEEES-CCSCCCHHHHHHHHHHH
T ss_pred --------------ccccccCCCEEEEeCCCCCcCCHHHHH-HHHHHHHCCCceEEEEec-CCCCcCHHHHHHHHHHH
Confidence 001235789999999999999999888 877765 47899999 99999888777665543
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.4e-20 Score=178.27 Aligned_cols=171 Identities=15% Similarity=0.156 Sum_probs=133.8
Q ss_pred CeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccc
Q 013006 144 KFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLW 222 (451)
Q Consensus 144 g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w 222 (451)
+..++|-..++ ..|+|||+||++++...|..+++.|++ ||.|+++|+||+|.|...
T Consensus 84 ~~~~~~p~~~~---~~p~vv~~HG~~~~~~~~~~~~~~la~~G~~vv~~d~~g~g~s~~~-------------------- 140 (306)
T 3vis_A 84 GGTIYYPRENN---TYGAIAISPGYTGTQSSIAWLGERIASHGFVVIAIDTNTTLDQPDS-------------------- 140 (306)
T ss_dssp CEEEEEESSCS---CEEEEEEECCTTCCHHHHHHHHHHHHTTTEEEEEECCSSTTCCHHH--------------------
T ss_pred ceEEEeeCCCC---CCCEEEEeCCCcCCHHHHHHHHHHHHhCCCEEEEecCCCCCCCcch--------------------
Confidence 35566655443 468899999999999999999999965 699999999999988411
Q ss_pred cCCCCCCccccccccCHHHHHHHHHHHHH--------HhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCC
Q 013006 223 GFGDKAQPWASELAYSVDLWQDQVCYFIK--------EVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWG 294 (451)
Q Consensus 223 ~~~~~~~~~~~~~~~s~~~~a~dv~~ll~--------~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~ 294 (451)
..+++.+.+..+.+ .++.++++++|||+||.+++.+|.++|+ ++++|++++...
T Consensus 141 ---------------~~~d~~~~~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~-- 202 (306)
T 3vis_A 141 ---------------RARQLNAALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHL-- 202 (306)
T ss_dssp ---------------HHHHHHHHHHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS--
T ss_pred ---------------HHHHHHHHHHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCCC-eeEEEEeccccC--
Confidence 12223223322222 2345789999999999999999999997 999999987420
Q ss_pred CCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHH
Q 013006 295 FSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFA 374 (451)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (451)
T Consensus 203 -------------------------------------------------------------------------------- 202 (306)
T 3vis_A 203 -------------------------------------------------------------------------------- 202 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChH-HHHHHHHHCCCC---cEEEeCCCCCCccccChHHHHhhh
Q 013006 375 SIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPV-WGLQVKRQVPEA---PYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~-~~~~l~~~lp~~---~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
...+.++++|+++++|++|.+++++ ..+.+.+.+++. ++++++++||+.+.+.++++++.|
T Consensus 203 ---------------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~gH~~~~~~~~~~~~~i 267 (306)
T 3vis_A 203 ---------------NKSWRDITVPTLIIGAEYDTIASVTLHSKPFYNSIPSPTDKAYLELDGASHFAPNITNKTIGMYS 267 (306)
T ss_dssp ---------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHTCCTTSCEEEEEETTCCTTGGGSCCHHHHHHH
T ss_pred ---------------ccccccCCCCEEEEecCCCcccCcchhHHHHHHHhccCCCceEEEECCCCccchhhchhHHHHHH
Confidence 0123457899999999999999998 589999998864 588999999999999999888765
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.84 E-value=4.3e-20 Score=169.11 Aligned_cols=192 Identities=14% Similarity=0.055 Sum_probs=138.6
Q ss_pred CCeEEEEeecCCCCC--CCCcEEEecCCCCChhcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhh
Q 013006 143 PKFNVHYEKAGCENV--NSPPVLFLPGFGVGSFHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKN 219 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~--~~p~VlllHG~~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~ 219 (451)
+|.++.+....+.+. +.|+||++||+++....|..++..|+ ++|.|+++|+||+|.+....... ..
T Consensus 14 ~~~~~~~~~~~p~~~~~~~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~~~~~~-----------~~ 82 (241)
T 3f67_A 14 QGENMPAYHARPKNADGPLPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPELYFRQGDPNEYHDI-----------PT 82 (241)
T ss_dssp TTEEEEEEEEEETTCCSCEEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECTTTTTCCGGGCCSH-----------HH
T ss_pred CCcceEEEEecCCCCCCCCCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecccccCCCCCchhhH-----------HH
Confidence 788888877765433 24789999999999999999999984 58999999999998774322110 00
Q ss_pred ccccCCCCCCccccccccCHHHHHHHHHHHHHHhC-----CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCC
Q 013006 220 FLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI-----REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWG 294 (451)
Q Consensus 220 ~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~-----~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~ 294 (451)
.+. .+. ...+.+...+|+.++++.+. .++++++||||||.+++.++.++|+ +++++++.+.....
T Consensus 83 ~~~-------~~~--~~~~~~~~~~d~~~~~~~l~~~~~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~v~~~~~~~~~ 152 (241)
T 3f67_A 83 LFK-------ELV--SKVPDAQVLADLDHVASWAARHGGDAHRLLITGFCWGGRITWLYAAHNPQ-LKAAVAWYGKLVGE 152 (241)
T ss_dssp HHH-------HTG--GGSCHHHHHHHHHHHHHHHHTTTEEEEEEEEEEETHHHHHHHHHHTTCTT-CCEEEEESCCCSCC
T ss_pred HHH-------Hhh--hcCCchhhHHHHHHHHHHHHhccCCCCeEEEEEEcccHHHHHHHHhhCcC-cceEEEEeccccCC
Confidence 000 000 01466788889988888874 4679999999999999999999997 77777766531100
Q ss_pred CCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHH
Q 013006 295 FSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFA 374 (451)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (451)
. .
T Consensus 153 ~----------------------------------------------------~-------------------------- 154 (241)
T 3f67_A 153 K----------------------------------------------------S-------------------------- 154 (241)
T ss_dssp C----------------------------------------------------C--------------------------
T ss_pred C----------------------------------------------------c--------------------------
Confidence 0 0
Q ss_pred HHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHC----CCCcEEEeCCCCCCcccc
Q 013006 375 SIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQV----PEAPYYEISPAGHCPHDE 441 (451)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l----p~~~~~~i~~~gH~~~~e 441 (451)
.....+....+.++++|+++++|++|.++|++..+.+.+.+ ++++++++++++|.+..+
T Consensus 155 --------~~~~~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~ 217 (241)
T 3f67_A 155 --------LNSPKHPVDIAVDLNAPVLGLYGAKDASIPQDTVETMRQALRAANATAEIVVYPEADHAFNAD 217 (241)
T ss_dssp --------SSSCCCHHHHGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHHHTTCSEEEEEETTCCTTTTCT
T ss_pred --------cCCccCHHHhhhhcCCCEEEEEecCCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCcceecC
Confidence 00000112234567899999999999999999888887776 678999999999988743
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.5e-20 Score=177.27 Aligned_cols=204 Identities=12% Similarity=0.039 Sum_probs=132.7
Q ss_pred ccceeeecCCeEEEEeecCCCC-------CCCCcEEEecCCC---CChhcHHHHHHhhcC-CceEEEEcCCCCCCCC--C
Q 013006 135 TSCFWEWKPKFNVHYEKAGCEN-------VNSPPVLFLPGFG---VGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSL--P 201 (451)
Q Consensus 135 ~~~~~~~~~g~~l~y~~~g~~~-------~~~p~VlllHG~~---~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~--~ 201 (451)
....+...+|.++.+..+ +.+ .+.|+|||+||.+ ++...|..++..|++ +|.|+++|+||+|.+. .
T Consensus 20 ~~v~~~~~~g~~~~~~~y-p~~~~~~~~~~~~p~vv~lHGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~~~~~~~~ 98 (283)
T 3bjr_A 20 MQVIKQKLTATCAQLTGY-LHQPDTNAHQTNLPAIIIVPGGSYTHIPVAQAESLAMAFAGHGYQAFYLEYTLLTDQQPLG 98 (283)
T ss_dssp SEEEEEECTTSSCEEEEE-EC--------CCEEEEEEECCSTTTCCCHHHHHHHHHHHHTTTCEEEEEECCCTTTCSSCB
T ss_pred cceEEeecCCCceeEEEe-cCCccccccCCCCcEEEEECCCccccCCccccHHHHHHHHhCCcEEEEEeccCCCccccCc
Confidence 334444556655555544 322 3568999999944 556779999999965 7999999999998872 1
Q ss_pred CCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhCCC
Q 013006 202 DEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACNPH 279 (451)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~P~ 279 (451)
+. ...++.+.++.+....+.+++ ++++|+||||||.+++.+|.++|+
T Consensus 99 ~~-------------------------------~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~ 147 (283)
T 3bjr_A 99 LA-------------------------------PVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWAT 147 (283)
T ss_dssp TH-------------------------------HHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTT
T ss_pred hh-------------------------------HHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccc
Confidence 10 002233333344344444444 489999999999999999999998
Q ss_pred c-------------cceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHh
Q 013006 280 L-------------VKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVY 346 (451)
Q Consensus 280 ~-------------v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (451)
+ +++++++++...... .+. ... ..+...+
T Consensus 148 ~~~~~~~~~~~~~~~~~~v~~~p~~~~~~------------------~~~--~~~------------------~~~~~~~ 189 (283)
T 3bjr_A 148 RVATELNVTPAMLKPNNVVLGYPVISPLL------------------GFP--KDD------------------ATLATWT 189 (283)
T ss_dssp HHHHHHTCCHHHHCCSSEEEESCCCCTTS------------------BC----------------------------CCC
T ss_pred cchhhcCCCcCCCCccEEEEcCCcccccc------------------ccc--ccc------------------chHHHHH
Confidence 7 999999987531000 000 000 0000000
Q ss_pred hcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC-
Q 013006 347 ADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE- 425 (451)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~- 425 (451)
......+....+.++.+|+|+++|++|.++|++.++.+.+.+++
T Consensus 190 -----------------------------------~~~~~~~~~~~~~~~~~P~lii~G~~D~~~p~~~~~~~~~~l~~~ 234 (283)
T 3bjr_A 190 -----------------------------------PTPNELAADQHVNSDNQPTFIWTTADDPIVPATNTLAYATALATA 234 (283)
T ss_dssp -----------------------------------CCGGGGCGGGSCCTTCCCEEEEEESCCTTSCTHHHHHHHHHHHHT
T ss_pred -----------------------------------HHhHhcCHHHhccCCCCCEEEEEcCCCCCCChHHHHHHHHHHHHC
Confidence 00001122334567899999999999999999988888887754
Q ss_pred ---CcEEEeCCCCCCccccCh
Q 013006 426 ---APYYEISPAGHCPHDEVP 443 (451)
Q Consensus 426 ---~~~~~i~~~gH~~~~e~p 443 (451)
+++++++++||.+..+.|
T Consensus 235 g~~~~~~~~~~~~H~~~~~~~ 255 (283)
T 3bjr_A 235 KIPYELHVFKHGPHGLALANA 255 (283)
T ss_dssp TCCEEEEEECCCSHHHHHHHH
T ss_pred CCCeEEEEeCCCCcccccccc
Confidence 489999999998777765
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.83 E-value=9.8e-21 Score=169.38 Aligned_cols=178 Identities=11% Similarity=0.003 Sum_probs=115.4
Q ss_pred CcEEEecCCCCChhcHH--HHHHhh---cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccc
Q 013006 160 PPVLFLPGFGVGSFHYE--KQLKDL---GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASE 234 (451)
Q Consensus 160 p~VlllHG~~~~~~~~~--~~~~~L---~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 234 (451)
|+|||+||++++...|. .+.+.+ ..+++|+++|+||+|.+
T Consensus 3 ptIl~lHGf~ss~~s~k~~~l~~~~~~~~~~~~v~~pdl~~~g~~----------------------------------- 47 (202)
T 4fle_A 3 STLLYIHGFNSSPSSAKATTFKSWLQQHHPHIEMQIPQLPPYPAE----------------------------------- 47 (202)
T ss_dssp CEEEEECCTTCCTTCHHHHHHHHHHHHHCTTSEEECCCCCSSHHH-----------------------------------
T ss_pred cEEEEeCCCCCCCCccHHHHHHHHHHHcCCCcEEEEeCCCCCHHH-----------------------------------
Confidence 79999999988877653 233334 34699999999998754
Q ss_pred cccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCCC
Q 013006 235 LAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGT 314 (451)
Q Consensus 235 ~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (451)
+.+++..+++.+..++++|+||||||.+|+.+|.++|..+..++...+.. ............
T Consensus 48 -------~~~~l~~~~~~~~~~~i~l~G~SmGG~~a~~~a~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~ 109 (202)
T 4fle_A 48 -------AAEMLESIVMDKAGQSIGIVGSSLGGYFATWLSQRFSIPAVVVNPAVRPF-----------ELLSDYLGENQN 109 (202)
T ss_dssp -------HHHHHHHHHHHHTTSCEEEEEETHHHHHHHHHHHHTTCCEEEESCCSSHH-----------HHGGGGCEEEEC
T ss_pred -------HHHHHHHHHHhcCCCcEEEEEEChhhHHHHHHHHHhcccchheeeccchH-----------HHHHHhhhhhcc
Confidence 35577778888899999999999999999999999998776665544320 000000000000
Q ss_pred CCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhcc
Q 013006 315 FPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQ 394 (451)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 394 (451)
. ............. ... ........
T Consensus 110 ~------------------------------~~~~~~~~~~~~~----------------~~~---------~~~~~~~~ 134 (202)
T 4fle_A 110 P------------------------------YTGQKYVLESRHI----------------YDL---------KAMQIEKL 134 (202)
T ss_dssp T------------------------------TTCCEEEECHHHH----------------HHH---------HTTCCSSC
T ss_pred c------------------------------cccccccchHHHH----------------HHH---------Hhhhhhhh
Confidence 0 0000000000000 000 01112345
Q ss_pred CCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 395 MNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 395 ~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
++++|+|+|+|++|.+||++.++++ ++++++.+++|+||.+ +.++++.+.|
T Consensus 135 ~~~~P~LiihG~~D~~Vp~~~s~~l---~~~~~l~i~~g~~H~~--~~~~~~~~~I 185 (202)
T 4fle_A 135 ESPDLLWLLQQTGDEVLDYRQAVAY---YTPCRQTVESGGNHAF--VGFDHYFSPI 185 (202)
T ss_dssp SCGGGEEEEEETTCSSSCHHHHHHH---TTTSEEEEESSCCTTC--TTGGGGHHHH
T ss_pred ccCceEEEEEeCCCCCCCHHHHHHH---hhCCEEEEECCCCcCC--CCHHHHHHHH
Confidence 6789999999999999999888765 4689999999999963 4555554443
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.83 E-value=8.2e-20 Score=167.36 Aligned_cols=188 Identities=16% Similarity=0.177 Sum_probs=132.9
Q ss_pred CCCCcEEEecCCCCChhcHHHHHHhhcC------CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccc---cCCCC
Q 013006 157 VNSPPVLFLPGFGVGSFHYEKQLKDLGK------DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLW---GFGDK 227 (451)
Q Consensus 157 ~~~p~VlllHG~~~~~~~~~~~~~~L~~------~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w---~~~~~ 227 (451)
+..|+|||+||++++...|..++..|.. +++|+++|.|+++.+..... ....++ +++..
T Consensus 21 ~~~p~vv~lHG~g~~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~------------~~~~w~~~~~~~~~ 88 (239)
T 3u0v_A 21 RHSASLIFLHGSGDSGQGLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGG------------ISNVWFDRFKITND 88 (239)
T ss_dssp CCCEEEEEECCTTCCHHHHHHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTC------------EEECSSCCSSSSSS
T ss_pred CCCcEEEEEecCCCchhhHHHHHHHHhhcccCCCceEEEeCCCCccccccCCCC------------ccccceeccCCCcc
Confidence 3568999999999999999999888854 49999999886543221100 000001 11110
Q ss_pred CCccccccccCHHHHHHHHHHHHHHh-----CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCc
Q 013006 228 AQPWASELAYSVDLWQDQVCYFIKEV-----IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRS 302 (451)
Q Consensus 228 ~~~~~~~~~~s~~~~a~dv~~ll~~l-----~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~ 302 (451)
. .....+++++++++..++++. +.++++|+||||||.+++.+|.++|++++++|++++....
T Consensus 89 ~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~--------- 155 (239)
T 3u0v_A 89 C----PEHLESIDVMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNK--------- 155 (239)
T ss_dssp S----CCCHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCT---------
T ss_pred c----ccchhhHHHHHHHHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCc---------
Confidence 0 111257888899999998873 5679999999999999999999999999999999975310
Q ss_pred hHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCC
Q 013006 303 PKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQG 382 (451)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (451)
... ....
T Consensus 156 ---------------~~~-----------------~~~~----------------------------------------- 162 (239)
T 3u0v_A 156 ---------------ASA-----------------VYQA----------------------------------------- 162 (239)
T ss_dssp ---------------TCH-----------------HHHH-----------------------------------------
T ss_pred ---------------hhH-----------------HHHH-----------------------------------------
Confidence 000 0000
Q ss_pred CCchhHHhhhccCCCCC-EEEEeeCCCCCCChHHHHHHHHHCC----CCcEEEeCCCCCCccccChHHHHhhh
Q 013006 383 NLSFREALSRCQMNGVP-ICLIYGKEDPWVKPVWGLQVKRQVP----EAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 383 ~~~~~~~~~~l~~i~~P-vLii~G~~D~~v~~~~~~~l~~~lp----~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
.. ....++| +++++|++|.+++.+.++.+.+.++ ++++++++++||.+..+..+++.+.|
T Consensus 163 -------~~-~~~~~~pp~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l 227 (239)
T 3u0v_A 163 -------LQ-KSNGVLPELFQCHGTADELVLHSWAEETNSMLKSLGVTTKFHSFPNVYHELSKTELDILKLWI 227 (239)
T ss_dssp -------HH-HCCSCCCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCCHHHHHHHHHHH
T ss_pred -------HH-hhccCCCCEEEEeeCCCCccCHHHHHHHHHHHHHcCCcEEEEEeCCCCCcCCHHHHHHHHHHH
Confidence 00 1224667 9999999999999988877777664 67899999999999877766665543
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.8e-19 Score=168.91 Aligned_cols=200 Identities=13% Similarity=0.107 Sum_probs=135.4
Q ss_pred ceeeecCCeEEEEeecCCCC----CCCCcEEEecCC---CCChhcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCC
Q 013006 137 CFWEWKPKFNVHYEKAGCEN----VNSPPVLFLPGF---GVGSFHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPR 208 (451)
Q Consensus 137 ~~~~~~~g~~l~y~~~g~~~----~~~p~VlllHG~---~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~ 208 (451)
..+...+|.++.+....+.+ .+.|+||++||. .++...|..++..|+ +||.|+++|+||+|.|...
T Consensus 17 ~~~~~~~g~~l~~~~~~~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~------ 90 (276)
T 3hxk_A 17 STFSLNDTAWVDFYQLQNPRQNENYTFPAIIICPGGGYQHISQRESDPLALAFLAQGYQVLLLNYTVMNKGTNY------ 90 (276)
T ss_dssp EECCCBTTBEEEEECCCC------CCBCEEEEECCSTTTSCCGGGSHHHHHHHHHTTCEEEEEECCCTTSCCCS------
T ss_pred ccccCCCCeEEEEEEeCCcccccCCCCCEEEEEcCCccccCCchhhHHHHHHHHHCCCEEEEecCccCCCcCCC------
Confidence 33445677888877666542 456899999994 455677888888885 5899999999999997521
Q ss_pred CCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh---------CCCCEEEEEeCcchHHHHHHHHh-CC
Q 013006 209 SKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV---------IREPVYVVGNSLGGFVAVYFAAC-NP 278 (451)
Q Consensus 209 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l---------~~~~v~lvGhS~GG~val~~A~~-~P 278 (451)
.+.....+|+..+++.+ ..++++|+||||||.+++.+|.+ ++
T Consensus 91 ----------------------------~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~ 142 (276)
T 3hxk_A 91 ----------------------------NFLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQI 142 (276)
T ss_dssp ----------------------------CTHHHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCST
T ss_pred ----------------------------CcCchHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccC
Confidence 13333444444443332 23689999999999999999998 78
Q ss_pred CccceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHH
Q 013006 279 HLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFT 358 (451)
Q Consensus 279 ~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (451)
.+++++|++++...+... ......+ . .++..
T Consensus 143 ~~~~~~v~~~p~~~~~~~------------~~~~~~~-----------------------~----~~~~~---------- 173 (276)
T 3hxk_A 143 HRPKGVILCYPVTSFTFG------------WPSDLSH-----------------------F----NFEIE---------- 173 (276)
T ss_dssp TCCSEEEEEEECCBTTSS------------CSSSSSS-----------------------S----CCCCS----------
T ss_pred CCccEEEEecCcccHHhh------------CCcchhh-----------------------h----hcCch----------
Confidence 999999999985321100 0000000 0 00000
Q ss_pred HHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC----CcEEEeCCC
Q 013006 359 RILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE----APYYEISPA 434 (451)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~----~~~~~i~~~ 434 (451)
.. ...+....+.++++|+|+++|++|.++|++.++.+.+.+++ +++++++++
T Consensus 174 -----------------------~~-~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~ 229 (276)
T 3hxk_A 174 -----------------------NI-SEYNISEKVTSSTPPTFIWHTADDEGVPIYNSLKYCDRLSKHQVPFEAHFFESG 229 (276)
T ss_dssp -----------------------CC-GGGBTTTTCCTTSCCEEEEEETTCSSSCTHHHHHHHHHHHTTTCCEEEEEESCC
T ss_pred -----------------------hh-hhCChhhccccCCCCEEEEecCCCceeChHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 00 01122334566789999999999999999998888777643 489999999
Q ss_pred CCCccccCh
Q 013006 435 GHCPHDEVP 443 (451)
Q Consensus 435 gH~~~~e~p 443 (451)
||.+....+
T Consensus 230 ~H~~~~~~~ 238 (276)
T 3hxk_A 230 PHGVSLANR 238 (276)
T ss_dssp CTTCTTCST
T ss_pred CCCccccCc
Confidence 998777655
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.5e-19 Score=166.69 Aligned_cols=176 Identities=15% Similarity=0.087 Sum_probs=129.1
Q ss_pred CeEEEEeecCCC-CCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhcc
Q 013006 144 KFNVHYEKAGCE-NVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFL 221 (451)
Q Consensus 144 g~~l~y~~~g~~-~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~ 221 (451)
...++|-..... ....|+|||+||++++...|..++..|++ +|.|+++|+||.+..
T Consensus 33 ~~~~~~p~~~~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~~s~~~---------------------- 90 (258)
T 2fx5_A 33 SCRIYRPRDLGQGGVRHPVILWGNGTGAGPSTYAGLLSHWASHGFVVAAAETSNAGTG---------------------- 90 (258)
T ss_dssp TEEEEEESSTTGGGCCEEEEEEECCTTCCGGGGHHHHHHHHHHTCEEEEECCSCCTTS----------------------
T ss_pred cEEEEeCCCCcccCCCceEEEEECCCCCCchhHHHHHHHHHhCCeEEEEecCCCCccH----------------------
Confidence 366666543211 11458899999999999999999999965 899999999963111
Q ss_pred ccCCCCCCccccccccCHHHHHHHHHHHHH--------HhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCC
Q 013006 222 WGFGDKAQPWASELAYSVDLWQDQVCYFIK--------EVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFW 293 (451)
Q Consensus 222 w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~--------~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~ 293 (451)
.++....+.+..... .++.++++++||||||.+++.+| .++++++++++++...
T Consensus 91 ---------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a--~~~~v~~~v~~~~~~~- 152 (258)
T 2fx5_A 91 ---------------REMLACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAG--QDTRVRTTAPIQPYTL- 152 (258)
T ss_dssp ---------------HHHHHHHHHHHHHHHSSSSTTTTTEEEEEEEEEEEEHHHHHHHHHT--TSTTCCEEEEEEECCS-
T ss_pred ---------------HHHHHHHHHHHhcccccccccccccCccceEEEEEChHHHHHHHhc--cCcCeEEEEEecCccc-
Confidence 233344444444333 44557899999999999999988 5678999999987420
Q ss_pred CCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHH
Q 013006 294 GFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASF 373 (451)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (451)
. .
T Consensus 153 --------------------~----------------------------------~------------------------ 154 (258)
T 2fx5_A 153 --------------------G----------------------------------L------------------------ 154 (258)
T ss_dssp --------------------S----------------------------------T------------------------
T ss_pred --------------------c----------------------------------c------------------------
Confidence 0 0
Q ss_pred HHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHH-HHHHHHHC-CCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 374 ASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVW-GLQVKRQV-PEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~-~~~l~~~l-p~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
.. ....+.++++|+|+|+|++|.+++++. .+.+.+.. +++++++++++||+.+.++++++++.|
T Consensus 155 ---------~~----~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~i 220 (258)
T 2fx5_A 155 ---------GH----DSASQRRQQGPMFLMSGGGDTIAFPYLNAQPVYRRANVPVFWGERRYVSHFEPVGSGGAYRGPS 220 (258)
T ss_dssp ---------TC----CGGGGGCCSSCEEEEEETTCSSSCHHHHTHHHHHHCSSCEEEEEESSCCTTSSTTTCGGGHHHH
T ss_pred ---------cc----chhhhccCCCCEEEEEcCCCcccCchhhHHHHHhccCCCeEEEEECCCCCccccchHHHHHHHH
Confidence 00 011245678999999999999999986 77777774 347899999999999999999887765
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.82 E-value=7.2e-20 Score=190.47 Aligned_cols=225 Identities=14% Similarity=0.103 Sum_probs=150.5
Q ss_pred ccceeeecCCeEEEEeecCCC--CCCCCcEEEecCCCCC--hhcHHHHHHhhc-CCceEEEEcCCC---CCCCCCCCCCC
Q 013006 135 TSCFWEWKPKFNVHYEKAGCE--NVNSPPVLFLPGFGVG--SFHYEKQLKDLG-KDYRAWAIDFLG---QGMSLPDEDPT 206 (451)
Q Consensus 135 ~~~~~~~~~g~~l~y~~~g~~--~~~~p~VlllHG~~~~--~~~~~~~~~~L~-~~~~Vi~~D~rG---~G~S~~~~~~~ 206 (451)
....++..+|.++++....|. +++.|+||++||.+.+ ...|..++..|+ +||.|+++|+|| +|.+.......
T Consensus 334 ~~~~~~~~~g~~i~~~~~~p~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~s~~~~~~~ 413 (582)
T 3o4h_A 334 RLVWVESFDGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKIIG 413 (582)
T ss_dssp EEEEEECTTSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCCSSCCHHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTT
T ss_pred eEEEEECCCCCEEEEEEEcCCCCCCCCcEEEEECCCcccccccccCHHHHHHHhCCCEEEEeccCCCCCCchhHHhhhhh
Confidence 344555668999998887765 2356899999998766 677888888885 579999999999 55552111000
Q ss_pred CCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEE
Q 013006 207 PRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTL 286 (451)
Q Consensus 207 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl 286 (451)
.| ....++++.+.+..+++....++++|+||||||.+++.+|.++|++++++|+
T Consensus 414 --------------~~------------~~~~~~d~~~~~~~l~~~~~~d~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~ 467 (582)
T 3o4h_A 414 --------------DP------------CGGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVA 467 (582)
T ss_dssp --------------CT------------TTHHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTTSSCEEE
T ss_pred --------------hc------------ccccHHHHHHHHHHHHhCCCcceEEEEEECHHHHHHHHHHhcCCCceEEEEE
Confidence 00 0135667777777666664456999999999999999999999999999999
Q ss_pred eccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccC
Q 013006 287 LNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQH 366 (451)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (451)
+++...+ ..+.. ........+....+. .. ...+.
T Consensus 468 ~~~~~~~----------------------------~~~~~------~~~~~~~~~~~~~~~---~~-~~~~~-------- 501 (582)
T 3o4h_A 468 GASVVDW----------------------------EEMYE------LSDAAFRNFIEQLTG---GS-REIMR-------- 501 (582)
T ss_dssp ESCCCCH----------------------------HHHHH------TCCHHHHHHHHHHTT---TC-HHHHH--------
T ss_pred cCCccCH----------------------------HHHhh------cccchhHHHHHHHcC---cC-HHHHH--------
Confidence 9985310 00000 000001111111111 00 00000
Q ss_pred hhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC----CcEEEeCCCCCCcc-cc
Q 013006 367 PAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE----APYYEISPAGHCPH-DE 441 (451)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~----~~~~~i~~~gH~~~-~e 441 (451)
.......+.++++|+|+++|++|..+|++.++++.+.+++ ++++++|++||.++ .+
T Consensus 502 -------------------~~sp~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~ 562 (582)
T 3o4h_A 502 -------------------SRSPINHVDRIKEPLALIHPQNASRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTME 562 (582)
T ss_dssp -------------------HTCGGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHH
T ss_pred -------------------hcCHHHHHhcCCCCEEEEecCCCCCcCHHHHHHHHHHHHhCCCCEEEEEECCCCCCCCChH
Confidence 0112234566899999999999999999999888887754 78999999999987 56
Q ss_pred ChHHHHhhh
Q 013006 442 VPEVCSLCL 450 (451)
Q Consensus 442 ~p~~v~~~I 450 (451)
+++++.+.+
T Consensus 563 ~~~~~~~~i 571 (582)
T 3o4h_A 563 DAVKILLPA 571 (582)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666666554
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.6e-19 Score=172.63 Aligned_cols=127 Identities=16% Similarity=0.073 Sum_probs=96.8
Q ss_pred CCccceeeecCCeEEEEeecCCCCC-CCCcEEEecCCC---CChhcHHHHHHhhcC--CceEEEEcCCCCCCCCCCCCCC
Q 013006 133 PITSCFWEWKPKFNVHYEKAGCENV-NSPPVLFLPGFG---VGSFHYEKQLKDLGK--DYRAWAIDFLGQGMSLPDEDPT 206 (451)
Q Consensus 133 ~~~~~~~~~~~g~~l~y~~~g~~~~-~~p~VlllHG~~---~~~~~~~~~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~~ 206 (451)
.++...+...+| ++.+..+.+.+. ..|+||++||.+ ++...|..++..|++ ++.|+++|+||+|.+..+..
T Consensus 47 ~~~~~~i~~~~g-~i~~~~~~p~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~g~~~~~~~-- 123 (311)
T 2c7b_A 47 ETRDVHIPVSGG-SIRARVYFPKKAAGLPAVLYYHGGGFVFGSIETHDHICRRLSRLSDSVVVSVDYRLAPEYKFPTA-- 123 (311)
T ss_dssp EEEEEEEEETTE-EEEEEEEESSSCSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTCEEEEECCCCTTTSCTTHH--
T ss_pred eEEEEEecCCCC-cEEEEEEecCCCCCCcEEEEECCCcccCCChhhhHHHHHHHHHhcCCEEEEecCCCCCCCCCCcc--
Confidence 344555555666 777665554322 347899999998 888999999999965 89999999999998843211
Q ss_pred CCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhCCC----c
Q 013006 207 PRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACNPH----L 280 (451)
Q Consensus 207 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~P~----~ 280 (451)
..+....++++.+.++++++ ++++|+|||+||.+++.+|.++|+ +
T Consensus 124 -----------------------------~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~ 174 (311)
T 2c7b_A 124 -----------------------------VEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKL 174 (311)
T ss_dssp -----------------------------HHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCC
T ss_pred -----------------------------HHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCC
Confidence 13555666666666677776 689999999999999999998876 5
Q ss_pred cceEEEeccCC
Q 013006 281 VKGVTLLNATP 291 (451)
Q Consensus 281 v~~lvl~~~~~ 291 (451)
++++|++++..
T Consensus 175 ~~~~vl~~p~~ 185 (311)
T 2c7b_A 175 VKKQVLIYPVV 185 (311)
T ss_dssp CSEEEEESCCC
T ss_pred ceeEEEECCcc
Confidence 99999999853
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.82 E-value=2.1e-19 Score=179.09 Aligned_cols=210 Identities=16% Similarity=0.084 Sum_probs=136.2
Q ss_pred CCeEEEEeecCCC-CCCCCcEEEecCCCCCh-hcHHHHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhh
Q 013006 143 PKFNVHYEKAGCE-NVNSPPVLFLPGFGVGS-FHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKN 219 (451)
Q Consensus 143 ~g~~l~y~~~g~~-~~~~p~VlllHG~~~~~-~~~~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~ 219 (451)
+|.+|....+.+. +.+.|+||++||++++. ..|..+...| .+||.|+++|+||+|.|......
T Consensus 176 ~g~~l~~~~~~P~~~~~~P~vv~~hG~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~~-------------- 241 (415)
T 3mve_A 176 EKGKITAHLHLTNTDKPHPVVIVSAGLDSLQTDMWRLFRDHLAKHDIAMLTVDMPSVGYSSKYPLT-------------- 241 (415)
T ss_dssp SSSEEEEEEEESCSSSCEEEEEEECCTTSCGGGGHHHHHHTTGGGTCEEEEECCTTSGGGTTSCCC--------------
T ss_pred CCEEEEEEEEecCCCCCCCEEEEECCCCccHHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCC--------------
Confidence 6777776665443 23458999999999884 4566666777 56899999999999999643211
Q ss_pred ccccCCCCCCccccccccCHHHHHHHHHHHHHHhC---CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCC
Q 013006 220 FLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI---REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFS 296 (451)
Q Consensus 220 ~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~---~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~ 296 (451)
.+.+.++.++.++++.+. .++++++|||+||.+++.+|..+|++|+++|++++...
T Consensus 242 -----------------~~~~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~---- 300 (415)
T 3mve_A 242 -----------------EDYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIH---- 300 (415)
T ss_dssp -----------------SCTTHHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCS----
T ss_pred -----------------CCHHHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCccc----
Confidence 345566667766666654 47899999999999999999999999999999998521
Q ss_pred CCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHH
Q 013006 297 PNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASI 376 (451)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (451)
.... ...+. ...+......+...+............. ....
T Consensus 301 ------~~~~-~~~~~-------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~------------ 341 (415)
T 3mve_A 301 ------DIFA-SPQKL-------------------QQMPKMYLDVLASRLGKSVVDIYSLSGQ-MAAW------------ 341 (415)
T ss_dssp ------HHHH-CHHHH-------------------TTSCHHHHHHHHHHTTCSSBCHHHHHHH-GGGG------------
T ss_pred ------cccc-cHHHH-------------------HHhHHHHHHHHHHHhCCCccCHHHHHHH-Hhhc------------
Confidence 0000 00000 0011112222222222222211111110 0000
Q ss_pred HhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCC
Q 013006 377 MFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISP 433 (451)
Q Consensus 377 ~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~ 433 (451)
......... ..++++|+|+|+|++|.++|++.++.+.+..++++++++++
T Consensus 342 ------~~~~~~~~~-~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~l~~i~g 391 (415)
T 3mve_A 342 ------SLKVQGFLS-SRKTKVPILAMSLEGDPVSPYSDNQMVAFFSTYGKAKKISS 391 (415)
T ss_dssp ------CTTTTTTTT-SSCBSSCEEEEEETTCSSSCHHHHHHHHHTBTTCEEEEECC
T ss_pred ------Ccccccccc-cCCCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCceEEEecC
Confidence 000000111 35789999999999999999999999999999999999998
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.3e-19 Score=173.55 Aligned_cols=240 Identities=14% Similarity=0.066 Sum_probs=145.4
Q ss_pred CccceeeecCCeEEEEeecCCCC--CCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCC
Q 013006 134 ITSCFWEWKPKFNVHYEKAGCEN--VNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKE 211 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y~~~g~~~--~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~ 211 (451)
.....+...+|.+|++....+.+ .+.|+||++||++.+...|......+.++|.|+++|+||+|.|........+..
T Consensus 68 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~p~vv~~HG~g~~~~~~~~~~~l~~~G~~v~~~d~rG~g~s~~~~~~~~~p~- 146 (337)
T 1vlq_A 68 AYDVTFSGYRGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRGFPHDWLFWPSMGYICFVMDTRGQGSGWLKGDTPDYPE- 146 (337)
T ss_dssp EEEEEEECGGGCEEEEEEEEECCSCSSEEEEEECCCTTCCCCCGGGGCHHHHTTCEEEEECCTTCCCSSSCCCCCBCCS-
T ss_pred EEEEEEEcCCCCEEEEEEEecCCCCCCccEEEEEcCCCCCCCCchhhcchhhCCCEEEEecCCCCCCcccCCCCccccc-
Confidence 33444555688888888776543 345889999999988766544433446799999999999998754211100000
Q ss_pred CCchhh--hhccccCCCCCCccccccccCHHHHHHHHHHHHHHh------CCCCEEEEEeCcchHHHHHHHHhCCCccce
Q 013006 212 GDSTEE--KNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV------IREPVYVVGNSLGGFVAVYFAACNPHLVKG 283 (451)
Q Consensus 212 ~~~~~~--~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l------~~~~v~lvGhS~GG~val~~A~~~P~~v~~ 283 (451)
+ ....-++ ....+.+...+++....+|+.++++.+ +.++++++|||+||.+++.+|.++| ++++
T Consensus 147 -----~~~~~~~~~~--~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p-~v~~ 218 (337)
T 1vlq_A 147 -----GPVDPQYPGF--MTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKA 218 (337)
T ss_dssp -----SSBCCCCSSS--TTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCE
T ss_pred -----ccCCCCCCcc--cccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCC-CccE
Confidence 0 0000000 000111112356778888888888877 2358999999999999999999999 6999
Q ss_pred EEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhh
Q 013006 284 VTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILET 363 (451)
Q Consensus 284 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (451)
+|+.++... ......... ....... +...+..........+..
T Consensus 219 ~vl~~p~~~--------~~~~~~~~~------------------------~~~~~~~-~~~~~~~~~~~~~~~~~~---- 261 (337)
T 1vlq_A 219 LLCDVPFLC--------HFRRAVQLV------------------------DTHPYAE-ITNFLKTHRDKEEIVFRT---- 261 (337)
T ss_dssp EEEESCCSC--------CHHHHHHHC------------------------CCTTHHH-HHHHHHHCTTCHHHHHHH----
T ss_pred EEECCCccc--------CHHHHHhcC------------------------CCcchHH-HHHHHHhCchhHHHHHHh----
Confidence 999887421 000000000 0000000 000111111111111110
Q ss_pred ccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC-CcEEEeCCCCCCcc
Q 013006 364 TQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE-APYYEISPAGHCPH 439 (451)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~-~~~~~i~~~gH~~~ 439 (451)
.. . .+....+.++++|+|+++|++|.++|++...++.+.++. +++.+++++||+..
T Consensus 262 ------------~~-----~---~~~~~~~~~i~~P~lii~G~~D~~~p~~~~~~~~~~l~~~~~~~~~~~~gH~~~ 318 (337)
T 1vlq_A 262 ------------LS-----Y---FDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYAGPKEIRIYPYNNHEGG 318 (337)
T ss_dssp ------------HH-----T---TCHHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCTTTT
T ss_pred ------------hh-----h---ccHHHHHHHcCCCEEEEeeCCCCCCCchhHHHHHHhcCCCcEEEEcCCCCCCCc
Confidence 00 0 122334467889999999999999999999999999985 78999999999953
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.82 E-value=5.3e-19 Score=170.50 Aligned_cols=114 Identities=15% Similarity=0.032 Sum_probs=91.6
Q ss_pred cCCeEEEEeecCCCCCCCCcEEEecCCC---CChhcHHHHHHhhcC--CceEEEEcCCCCCCCCCCCCCCCCCCCCCchh
Q 013006 142 KPKFNVHYEKAGCENVNSPPVLFLPGFG---VGSFHYEKQLKDLGK--DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTE 216 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~~~~p~VlllHG~~---~~~~~~~~~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~ 216 (451)
.+|+++++..... ...|+|||+||.+ ++...|..++..|+. +|+|+++|+||.+....
T Consensus 81 ~~~~~~~~~~p~~--~~~p~vv~lHGgg~~~~~~~~~~~~~~~la~~~g~~vi~~D~r~~~~~~~--------------- 143 (326)
T 3d7r_A 81 LDDMQVFRFNFRH--QIDKKILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTPEFHI--------------- 143 (326)
T ss_dssp ETTEEEEEEESTT--CCSSEEEEECCSTTTSCCCHHHHHHHHHHHHHHCSEEEEECCCCTTTSCH---------------
T ss_pred ECCEEEEEEeeCC--CCCeEEEEECCCcccCCCCHHHHHHHHHHHHHhCCEEEEEeCCCCCCCCc---------------
Confidence 3677877655432 3568999999954 467788888888863 79999999998654310
Q ss_pred hhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCc----cceEEEeccCC
Q 013006 217 EKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHL----VKGVTLLNATP 291 (451)
Q Consensus 217 ~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~----v~~lvl~~~~~ 291 (451)
...++++++++..+++.++.++++|+||||||.+|+.+|.++|++ ++++|++++..
T Consensus 144 -------------------~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~ 203 (326)
T 3d7r_A 144 -------------------DDTFQAIQRVYDQLVSEVGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPIL 203 (326)
T ss_dssp -------------------HHHHHHHHHHHHHHHHHHCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCC
T ss_pred -------------------hHHHHHHHHHHHHHHhccCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECccc
Confidence 146788888888888888889999999999999999999998877 99999999854
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.4e-19 Score=168.21 Aligned_cols=181 Identities=12% Similarity=0.083 Sum_probs=116.0
Q ss_pred CCCCcEEEecC---CCCChhcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccc
Q 013006 157 VNSPPVLFLPG---FGVGSFHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWA 232 (451)
Q Consensus 157 ~~~p~VlllHG---~~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 232 (451)
.+.|+||++|| ..++...|..++..|+ .+|.|+++|+||+|.+.. ..
T Consensus 33 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~---~~-------------------------- 83 (277)
T 3bxp_A 33 VDYPIMIICPGGGFTYHSGREEAPIATRMMAAGMHTVVLNYQLIVGDQS---VY-------------------------- 83 (277)
T ss_dssp CCEEEEEEECCSTTTSCCCTTHHHHHHHHHHTTCEEEEEECCCSTTTCC---CT--------------------------
T ss_pred CCccEEEEECCCccccCCCccchHHHHHHHHCCCEEEEEecccCCCCCc---cC--------------------------
Confidence 35689999999 6677788999999885 589999999999994321 10
Q ss_pred cccccCHHHHHHHHHHHHHH---hCC--CCEEEEEeCcchHHHHHHHHhC--------------CCccceEEEeccCCCC
Q 013006 233 SELAYSVDLWQDQVCYFIKE---VIR--EPVYVVGNSLGGFVAVYFAACN--------------PHLVKGVTLLNATPFW 293 (451)
Q Consensus 233 ~~~~~s~~~~a~dv~~ll~~---l~~--~~v~lvGhS~GG~val~~A~~~--------------P~~v~~lvl~~~~~~~ 293 (451)
....+++.+.+..+.+. +++ ++++|+||||||.+++.+|.++ |.+++++|++++....
T Consensus 84 ---~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~ 160 (277)
T 3bxp_A 84 ---PWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAIILGYPVIDL 160 (277)
T ss_dssp ---THHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEEEEESCCCBT
T ss_pred ---chHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEEEEeCCcccC
Confidence 02344444444444433 333 5899999999999999999985 7789999999985310
Q ss_pred CCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHH
Q 013006 294 GFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASF 373 (451)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (451)
.. .+... .... ...+.
T Consensus 161 ~~------------------~~~~~-----------------~~~~---~~~~~-------------------------- 176 (277)
T 3bxp_A 161 TA------------------GFPTT-----------------SAAR---NQITT-------------------------- 176 (277)
T ss_dssp TS------------------SSSSS-----------------HHHH---HHHCS--------------------------
T ss_pred CC------------------CCCCc-----------------cccc---hhccc--------------------------
Confidence 00 00000 0000 00000
Q ss_pred HHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC----CCcEEEeCCCCCCccccC
Q 013006 374 ASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP----EAPYYEISPAGHCPHDEV 442 (451)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp----~~~~~~i~~~gH~~~~e~ 442 (451)
.....+....+.++.+|+|+++|++|.++|++.++.+.+.++ +++++++++++|.+....
T Consensus 177 ---------~~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~ 240 (277)
T 3bxp_A 177 ---------DARLWAAQRLVTPASKPAFVWQTATDESVPPINSLKYVQAMLQHQVATAYHLFGSGIHGLALAN 240 (277)
T ss_dssp ---------CGGGSBGGGGCCTTSCCEEEEECTTCCCSCTHHHHHHHHHHHHTTCCEEEEECCCC--------
T ss_pred ---------hhhhcCHhhccccCCCCEEEEeeCCCCccChHHHHHHHHHHHHCCCeEEEEEeCCCCccccccc
Confidence 000012223345678899999999999999988888877654 358999999999655544
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-19 Score=192.64 Aligned_cols=219 Identities=12% Similarity=0.033 Sum_probs=142.9
Q ss_pred cceeeecCC-eEEEEeecCCCC----CCCCcEEEecCCCCCh---hcHHH----HHHhhc-CCceEEEEcCCCCCCCCCC
Q 013006 136 SCFWEWKPK-FNVHYEKAGCEN----VNSPPVLFLPGFGVGS---FHYEK----QLKDLG-KDYRAWAIDFLGQGMSLPD 202 (451)
Q Consensus 136 ~~~~~~~~g-~~l~y~~~g~~~----~~~p~VlllHG~~~~~---~~~~~----~~~~L~-~~~~Vi~~D~rG~G~S~~~ 202 (451)
...+...+| .++++....|.+ ++.|+||++||.+.+. ..|.. ++..|+ ++|.|+++|+||+|.|...
T Consensus 457 ~~~~~~~~g~~~~~~~~~~P~~~~~~~~~p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la~~G~~v~~~d~rG~g~s~~~ 536 (706)
T 2z3z_A 457 TGTIMAADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQKGYAVFTVDSRGSANRGAA 536 (706)
T ss_dssp EEEEECTTSSSEEEEEEECCTTCCTTSCEEEEEECCCCTTCCCCCSCC----CCHHHHHHHTTCEEEEECCTTCSSSCHH
T ss_pred EEEEEcCCCCEEEEEEEEeCCCCCCCCCccEEEEecCCCCceeeccccccCchHHHHHHHhCCcEEEEEecCCCcccchh
Confidence 344555688 899999887653 2347899999987665 45665 567774 5899999999999988532
Q ss_pred CCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh------CCCCEEEEEeCcchHHHHHHHHh
Q 013006 203 EDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV------IREPVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l------~~~~v~lvGhS~GG~val~~A~~ 276 (451)
.... .... +. ....+|+.++++.+ +.++++|+||||||++++.+|.+
T Consensus 537 ~~~~-----------~~~~---------------~~-~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~ 589 (706)
T 2z3z_A 537 FEQV-----------IHRR---------------LG-QTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLT 589 (706)
T ss_dssp HHHT-----------TTTC---------------TT-HHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHH
T ss_pred HHHH-----------Hhhc---------------cC-CccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHh
Confidence 1000 0000 11 12234444444444 24689999999999999999999
Q ss_pred CCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHH
Q 013006 277 NPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTV 356 (451)
Q Consensus 277 ~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (451)
+|++++++|++++...+.. .... + ....+.. .......
T Consensus 590 ~p~~~~~~v~~~~~~~~~~---------------------~~~~---~-----------------~~~~~~~-~~~~~~~ 627 (706)
T 2z3z_A 590 HGDVFKVGVAGGPVIDWNR---------------------YAIM---Y-----------------GERYFDA-PQENPEG 627 (706)
T ss_dssp STTTEEEEEEESCCCCGGG---------------------SBHH---H-----------------HHHHHCC-TTTCHHH
T ss_pred CCCcEEEEEEcCCccchHH---------------------HHhh---h-----------------hhhhcCC-cccChhh
Confidence 9999999999988532100 0000 0 0000000 0000010
Q ss_pred HHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC----CcEEEeC
Q 013006 357 FTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE----APYYEIS 432 (451)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~----~~~~~i~ 432 (451)
+. . .+....+.++++|+|+++|++|.++|++.++++.+.+++ .++.++|
T Consensus 628 ~~----------------~-----------~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~ 680 (706)
T 2z3z_A 628 YD----------------A-----------ANLLKRAGDLKGRLMLIHGAIDPVVVWQHSLLFLDACVKARTYPDYYVYP 680 (706)
T ss_dssp HH----------------H-----------HCGGGGGGGCCSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEET
T ss_pred hh----------------h-----------CCHhHhHHhCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeC
Confidence 00 0 112334567889999999999999999988888777653 5899999
Q ss_pred CCCCCccccChHHHHhhh
Q 013006 433 PAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 433 ~~gH~~~~e~p~~v~~~I 450 (451)
++||.++.++++++.+.|
T Consensus 681 ~~gH~~~~~~~~~~~~~i 698 (706)
T 2z3z_A 681 SHEHNVMGPDRVHLYETI 698 (706)
T ss_dssp TCCSSCCTTHHHHHHHHH
T ss_pred CCCCCCCcccHHHHHHHH
Confidence 999999988888877665
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.80 E-value=1e-19 Score=194.56 Aligned_cols=224 Identities=13% Similarity=0.041 Sum_probs=147.0
Q ss_pred ccceeeecCC-eEEEEeecCCCC----CCCCcEEEecCCCCCh---hcHH-----HHHHhh-cCCceEEEEcCCCCCCCC
Q 013006 135 TSCFWEWKPK-FNVHYEKAGCEN----VNSPPVLFLPGFGVGS---FHYE-----KQLKDL-GKDYRAWAIDFLGQGMSL 200 (451)
Q Consensus 135 ~~~~~~~~~g-~~l~y~~~g~~~----~~~p~VlllHG~~~~~---~~~~-----~~~~~L-~~~~~Vi~~D~rG~G~S~ 200 (451)
....++..+| .+|+|..+.|.+ +..|+||++||.+.+. ..|. .++..| .+||.|+++|+||+|.|.
T Consensus 488 ~~~~~~~~~g~~~l~~~~~~P~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~s~ 567 (741)
T 2ecf_A 488 EFGTLTAADGKTPLNYSVIKPAGFDPAKRYPVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQQGYVVFSLDNRGTPRRG 567 (741)
T ss_dssp EEEEEECTTSSCEEEEEEECCSSCCTTSCEEEEEECCCSTTCCSCSSCCCCSHHHHHHHHHHHTTCEEEEECCTTCSSSC
T ss_pred EEEEEEcCCCCEEEEEEEEeCCCCCCCCCcCEEEEEcCCCCcccccccccccchhHHHHHHHhCCCEEEEEecCCCCCCC
Confidence 3444556689 999999887753 2347899999988764 3454 577777 458999999999999975
Q ss_pred CCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHH--hCCCCEEEEEeCcchHHHHHHHHhCC
Q 013006 201 PDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKE--VIREPVYVVGNSLGGFVAVYFAACNP 278 (451)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~--l~~~~v~lvGhS~GG~val~~A~~~P 278 (451)
...... ....|+ .+.++++.+.+..+.+. ++.++++|+||||||++++.+|.++|
T Consensus 568 ~~~~~~-----------~~~~~~------------~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p 624 (741)
T 2ecf_A 568 RDFGGA-----------LYGKQG------------TVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKAS 624 (741)
T ss_dssp HHHHHT-----------TTTCTT------------THHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCT
T ss_pred hhhhHH-----------Hhhhcc------------cccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCC
Confidence 311000 000000 13355555555555443 23468999999999999999999999
Q ss_pred CccceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHH
Q 013006 279 HLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFT 358 (451)
Q Consensus 279 ~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (451)
++++++|++++...+.. .... + ....+.. .......+
T Consensus 625 ~~~~~~v~~~~~~~~~~---------------------~~~~---~-----------------~~~~~~~-~~~~~~~~- 661 (741)
T 2ecf_A 625 DSYACGVAGAPVTDWGL---------------------YDSH---Y-----------------TERYMDL-PARNDAGY- 661 (741)
T ss_dssp TTCSEEEEESCCCCGGG---------------------SBHH---H-----------------HHHHHCC-TGGGHHHH-
T ss_pred CceEEEEEcCCCcchhh---------------------hccc---c-----------------chhhcCC-cccChhhh-
Confidence 99999999998532100 0000 0 0000000 00000000
Q ss_pred HHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC----CcEEEeCCC
Q 013006 359 RILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE----APYYEISPA 434 (451)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~----~~~~~i~~~ 434 (451)
.. .+....+.++++|+|+++|++|..++++..+++.+.+++ .++++++++
T Consensus 662 ---------------~~-----------~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~ 715 (741)
T 2ecf_A 662 ---------------RE-----------ARVLTHIEGLRSPLLLIHGMADDNVLFTNSTSLMSALQKRGQPFELMTYPGA 715 (741)
T ss_dssp ---------------HH-----------HCSGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTC
T ss_pred ---------------hh-----------cCHHHHHhhCCCCEEEEccCCCCCCCHHHHHHHHHHHHHCCCceEEEEECCC
Confidence 00 111234567889999999999999999999888887654 489999999
Q ss_pred CCCccccChHHHHhhh
Q 013006 435 GHCPHDEVPEVCSLCL 450 (451)
Q Consensus 435 gH~~~~e~p~~v~~~I 450 (451)
||.++.+.++++.+.|
T Consensus 716 ~H~~~~~~~~~~~~~i 731 (741)
T 2ecf_A 716 KHGLSGADALHRYRVA 731 (741)
T ss_dssp CSSCCHHHHHHHHHHH
T ss_pred CCCCCCCchhHHHHHH
Confidence 9999988777666554
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.80 E-value=4.7e-19 Score=163.50 Aligned_cols=202 Identities=13% Similarity=0.146 Sum_probs=133.7
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcC-C---ceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGK-D---YRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWAS 233 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~-~---~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 233 (451)
.++||||+||++++...|+.+++.|.+ + ++|+.+|.+++|.+.........+ ...-....|++....
T Consensus 3 ~~~pvv~iHG~~~~~~~~~~~~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~------~~P~i~v~f~~n~~~--- 73 (250)
T 3lp5_A 3 RMAPVIMVPGSSASQNRFDSLITELGKETPKKHSVLKLTVQTDGTIKYSGSIAAND------NEPFIVIGFANNRDG--- 73 (250)
T ss_dssp SCCCEEEECCCGGGHHHHHHHHHHHHHHSSSCCCEEEEEECTTSCEEEEECCCTTC------SSCEEEEEESCCCCS---
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHhcCCCCceEEEEEEecCCeEEEeeecCCCC------cCCeEEEEeccCCCc---
Confidence 467999999999999999999999965 3 789999998888742111000000 000001122221110
Q ss_pred ccccCHHHHHHHHHHHHHHh----CCCCEEEEEeCcchHHHHHHHHhC-----CCccceEEEeccCCCCCCCCCCCCchH
Q 013006 234 ELAYSVDLWQDQVCYFIKEV----IREPVYVVGNSLGGFVAVYFAACN-----PHLVKGVTLLNATPFWGFSPNPIRSPK 304 (451)
Q Consensus 234 ~~~~s~~~~a~dv~~ll~~l----~~~~v~lvGhS~GG~val~~A~~~-----P~~v~~lvl~~~~~~~~~~~~~~~~~~ 304 (451)
.++++.+++++..+++.+ +.+++++|||||||.+++.++.++ |++|+++|+++++.. +....
T Consensus 74 --~~~~~~~a~~l~~~~~~l~~~~~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~-g~~~~------ 144 (250)
T 3lp5_A 74 --KANIDKQAVWLNTAFKALVKTYHFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYN-MESTS------ 144 (250)
T ss_dssp --HHHHHHHHHHHHHHHHHHHTTSCCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTT-TTCCC------
T ss_pred --ccCHHHHHHHHHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCC-ccccc------
Confidence 127888899999999888 889999999999999999999987 678999999987421 11000
Q ss_pred HhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCC
Q 013006 305 LARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNL 384 (451)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (451)
+ . .....+..+.
T Consensus 145 ------------------------------~-------------~--~~~~~~~~l~----------------------- 156 (250)
T 3lp5_A 145 ------------------------------T-------------T--AKTSMFKELY----------------------- 156 (250)
T ss_dssp ------------------------------S-------------S--CCCHHHHHHH-----------------------
T ss_pred ------------------------------c-------------c--ccCHHHHHHH-----------------------
Confidence 0 0 0000111100
Q ss_pred chhHHhhhccCCCCCEEEEeeC----CCCCCChHHHHHHHHHCCC--CcE--EEeC--CCCCCccccChHHHHhhh
Q 013006 385 SFREALSRCQMNGVPICLIYGK----EDPWVKPVWGLQVKRQVPE--APY--YEIS--PAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 385 ~~~~~~~~l~~i~~PvLii~G~----~D~~v~~~~~~~l~~~lp~--~~~--~~i~--~~gH~~~~e~p~~v~~~I 450 (451)
+....+.. ++|+++|+|+ .|.+||.+.++.+...+++ ..+ ..+. +++|..+.++| ++++.|
T Consensus 157 ---~~~~~lp~-~vpvl~I~G~~~~~~Dg~Vp~~sa~~l~~l~~~~~~~~~~~~v~g~~a~H~~l~e~~-~v~~~I 227 (250)
T 3lp5_A 157 ---RYRTGLPE-SLTVYSIAGTENYTSDGTVPYNSVNYGKYIFQDQVKHFTEITVTGANTAHSDLPQNK-QIVSLI 227 (250)
T ss_dssp ---HTGGGSCT-TCEEEEEECCCCCCTTTBCCHHHHTTHHHHHTTTSSEEEEEECTTTTBSSCCHHHHH-HHHHHH
T ss_pred ---hccccCCC-CceEEEEEecCCCCCCceeeHHHHHHHHHHhcccccceEEEEEeCCCCchhcchhCH-HHHHHH
Confidence 11122332 7999999999 8999999999888887765 233 3343 47799999999 666654
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.80 E-value=5.6e-19 Score=171.09 Aligned_cols=214 Identities=12% Similarity=0.063 Sum_probs=124.2
Q ss_pred CCCcEEEecCCCC---Chh--cHHHHHHhhc--CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCc
Q 013006 158 NSPPVLFLPGFGV---GSF--HYEKQLKDLG--KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQP 230 (451)
Q Consensus 158 ~~p~VlllHG~~~---~~~--~~~~~~~~L~--~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 230 (451)
+.|+|||+||.+. +.. .|..++..|+ .++.|+++|+||++.+..+
T Consensus 82 ~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~~~~---------------------------- 133 (338)
T 2o7r_A 82 KLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEHRLP---------------------------- 133 (338)
T ss_dssp CEEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTCEEEEEECCCTTTTCTT----------------------------
T ss_pred CceEEEEEcCCcCcCCCCCchhHHHHHHHHHHHCCcEEEEecCCCCCCCCCc----------------------------
Confidence 4689999999762 222 3888888886 5899999999998765311
Q ss_pred cccccccCHHHHHHHHHHHHHH--------hCCCCEEEEEeCcchHHHHHHHHhCCC--------ccceEEEeccCCCCC
Q 013006 231 WASELAYSVDLWQDQVCYFIKE--------VIREPVYVVGNSLGGFVAVYFAACNPH--------LVKGVTLLNATPFWG 294 (451)
Q Consensus 231 ~~~~~~~s~~~~a~dv~~ll~~--------l~~~~v~lvGhS~GG~val~~A~~~P~--------~v~~lvl~~~~~~~~ 294 (451)
..+++..+.+..+.+. ++.++++|+||||||.+++.+|.++|+ +|+++|++++.....
T Consensus 134 ------~~~~d~~~~~~~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~~ 207 (338)
T 2o7r_A 134 ------AAYDDAMEALQWIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGS 207 (338)
T ss_dssp ------HHHHHHHHHHHHHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCCS
T ss_pred ------hHHHHHHHHHHHHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCCC
Confidence 2344444444444432 334789999999999999999999988 899999998753110
Q ss_pred CCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHH
Q 013006 295 FSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFA 374 (451)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (451)
. ........ ...... ............+......... ...+
T Consensus 208 ~-----~~~~~~~~---~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~--------~~~~------- 248 (338)
T 2o7r_A 208 K-----RTGSELRL---ANDSRL----------------PTFVLDLIWELSLPMGADRDHE--------YCNP------- 248 (338)
T ss_dssp S-----CCHHHHHT---TTCSSS----------------CHHHHHHHHHHHSCTTCCTTST--------TTCC-------
T ss_pred c-----CChhhhcc---CCCccc----------------CHHHHHHHHHHhCCCCCCCCCc--------ccCC-------
Confidence 0 00000000 000000 0000111111111000000000 0000
Q ss_pred HHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChH--HHHHHHHHCCCCcEEEeCCCCCCccccCh---HHHHhh
Q 013006 375 SIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPV--WGLQVKRQVPEAPYYEISPAGHCPHDEVP---EVCSLC 449 (451)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~--~~~~l~~~lp~~~~~~i~~~gH~~~~e~p---~~v~~~ 449 (451)
.........+..+..+.+|+|+++|++|.+++.. ..+.+.+..+++++++++++||.+++++| +++.+.
T Consensus 249 ------~~~~~~~~~~~~l~~~~~P~Lvi~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~g~gH~~~~~~~~~~~~~~~~ 322 (338)
T 2o7r_A 249 ------TAESEPLYSFDKIRSLGWRVMVVGCHGDPMIDRQMELAERLEKKGVDVVAQFDVGGYHAVKLEDPEKAKQFFVI 322 (338)
T ss_dssp ------C----CCTHHHHHHHHTCEEEEEEETTSTTHHHHHHHHHHHHHTTCEEEEEEESSCCTTGGGTCHHHHHHHHHH
T ss_pred ------CCCCcccccHhhhcCCCCCEEEEECCCCcchHHHHHHHHHHHHCCCcEEEEEECCCceEEeccChHHHHHHHHH
Confidence 0000000012334446789999999999998743 34555555567899999999999988877 555554
Q ss_pred h
Q 013006 450 L 450 (451)
Q Consensus 450 I 450 (451)
|
T Consensus 323 i 323 (338)
T 2o7r_A 323 L 323 (338)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.79 E-value=2.8e-18 Score=181.08 Aligned_cols=226 Identities=16% Similarity=0.105 Sum_probs=149.3
Q ss_pred ceeeecCCeEEEEeecCCCC--------CCCCcEEEecCCCCChh--cHHHHHHhhcC-CceEEEEcCCC---CCCCCCC
Q 013006 137 CFWEWKPKFNVHYEKAGCEN--------VNSPPVLFLPGFGVGSF--HYEKQLKDLGK-DYRAWAIDFLG---QGMSLPD 202 (451)
Q Consensus 137 ~~~~~~~g~~l~y~~~g~~~--------~~~p~VlllHG~~~~~~--~~~~~~~~L~~-~~~Vi~~D~rG---~G~S~~~ 202 (451)
..+...+|.++++....|.+ ...|+||++||++.+.. .|..++..|++ ||.|+++|+|| +|.+...
T Consensus 394 ~~~~~~dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~~~~~ 473 (662)
T 3azo_A 394 RTFTAPDGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVPAVLDLDVAYFTSRGIGVADVNYGGSTGYGRAYRE 473 (662)
T ss_dssp EEEECTTSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCCCCSCCHHHHHHHTTTCEEEEEECTTCSSSCHHHHH
T ss_pred EEEEcCCCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccCcccchHHHHHHHhCCCEEEEECCCCCCCccHHHHH
Confidence 34555689999888876643 24588999999987665 78888888854 79999999999 7666321
Q ss_pred CCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHH--hCCCCEEEEEeCcchHHHHHHHHhCCCc
Q 013006 203 EDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKE--VIREPVYVVGNSLGGFVAVYFAACNPHL 280 (451)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~--l~~~~v~lvGhS~GG~val~~A~~~P~~ 280 (451)
... ..| ..++++++++.+..++++ ++.++++|+||||||++++.++.. |++
T Consensus 474 ~~~--------------~~~------------~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~ 526 (662)
T 3azo_A 474 RLR--------------GRW------------GVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDV 526 (662)
T ss_dssp TTT--------------TTT------------TTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCC
T ss_pred hhc--------------ccc------------ccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cCc
Confidence 100 001 015688889999888888 566799999999999999998886 999
Q ss_pred cceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHH
Q 013006 281 VKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRI 360 (451)
Q Consensus 281 v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (451)
++++|++++...+ ..... ... ......+....+...... .+.+.
T Consensus 527 ~~~~v~~~~~~~~---------~~~~~--~~~----------------------~~~~~~~~~~~~~~~~~~-~~~~~-- 570 (662)
T 3azo_A 527 YACGTVLYPVLDL---------LGWAD--GGT----------------------HDFESRYLDFLIGSFEEF-PERYR-- 570 (662)
T ss_dssp CSEEEEESCCCCH---------HHHHT--TCS----------------------CGGGTTHHHHHTCCTTTC-HHHHH--
T ss_pred eEEEEecCCccCH---------HHHhc--ccc----------------------cchhhHhHHHHhCCCccc-hhHHH--
Confidence 9999999875310 00000 000 000000111111111000 00000
Q ss_pred HhhccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCC----cEEEeCCCCC
Q 013006 361 LETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEA----PYYEISPAGH 436 (451)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~----~~~~i~~~gH 436 (451)
. ......+.++++|+|+++|++|..+|++.++++.+.+++. ++++++++||
T Consensus 571 --------------~-----------~sp~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH 625 (662)
T 3azo_A 571 --------------D-----------RAPLTRADRVRVPFLLLQGLEDPVCPPEQCDRFLEAVAGCGVPHAYLSFEGEGH 625 (662)
T ss_dssp --------------H-----------TCGGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHTTSCCCEEEEEETTCCS
T ss_pred --------------h-----------hChHhHhccCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCC
Confidence 0 0122345668899999999999999999999999988765 8899999999
Q ss_pred Ccc-ccChHHHHhhh
Q 013006 437 CPH-DEVPEVCSLCL 450 (451)
Q Consensus 437 ~~~-~e~p~~v~~~I 450 (451)
.+. .++++++.+.+
T Consensus 626 ~~~~~~~~~~~~~~~ 640 (662)
T 3azo_A 626 GFRRKETMVRALEAE 640 (662)
T ss_dssp SCCSHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHH
Confidence 864 34555555543
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.79 E-value=2.3e-18 Score=165.85 Aligned_cols=123 Identities=13% Similarity=0.004 Sum_probs=91.0
Q ss_pred CccceeeecCCeEEEEeecCCC-CCCCCcEEEecC---CCCChhcHHHHHHhhcC--CceEEEEcCCCCCCCCCCCCCCC
Q 013006 134 ITSCFWEWKPKFNVHYEKAGCE-NVNSPPVLFLPG---FGVGSFHYEKQLKDLGK--DYRAWAIDFLGQGMSLPDEDPTP 207 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y~~~g~~-~~~~p~VlllHG---~~~~~~~~~~~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~~~ 207 (451)
+....+...+| ++.+..+.+. ....|+|||+|| +.++...|..++..|++ ++.|+++|+||+|.+..+
T Consensus 65 ~~~~~i~~~~~-~i~~~iy~P~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~La~~~g~~Vv~~Dyrg~~~~~~p----- 138 (323)
T 3ain_A 65 IEDITIPGSET-NIKARVYYPKTQGPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYRLAPENKFP----- 138 (323)
T ss_dssp EEEEEEECSSS-EEEEEEEECSSCSCCCEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCTT-----
T ss_pred EEEEEecCCCC-eEEEEEEecCCCCCCcEEEEECCCccccCChHHHHHHHHHHHHhcCCEEEEecCCCCCCCCCc-----
Confidence 34444444455 6665544432 235689999999 45788899999999975 899999999999987421
Q ss_pred CCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh----CCCCEEEEEeCcchHHHHHHHHhCCCcc--
Q 013006 208 RSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV----IREPVYVVGNSLGGFVAVYFAACNPHLV-- 281 (451)
Q Consensus 208 ~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l----~~~~v~lvGhS~GG~val~~A~~~P~~v-- 281 (451)
..+++..+.+..+.+.. +.++++|+|||+||.+|+.+|.++|+++
T Consensus 139 -----------------------------~~~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~ 189 (323)
T 3ain_A 139 -----------------------------AAVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIK 189 (323)
T ss_dssp -----------------------------HHHHHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCC
T ss_pred -----------------------------chHHHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCC
Confidence 23455555555554443 4678999999999999999999998876
Q ss_pred -ceEEEeccCC
Q 013006 282 -KGVTLLNATP 291 (451)
Q Consensus 282 -~~lvl~~~~~ 291 (451)
+++|+++|..
T Consensus 190 ~~~~vl~~p~~ 200 (323)
T 3ain_A 190 LKYQVLIYPAV 200 (323)
T ss_dssp CSEEEEESCCC
T ss_pred ceeEEEEeccc
Confidence 8999998753
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.1e-18 Score=160.27 Aligned_cols=202 Identities=16% Similarity=0.172 Sum_probs=126.8
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcCCc----eEEEEcCCCCCC------CCCCCCCCCCCCCCCchhhhhccccCCCC
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGKDY----RAWAIDFLGQGM------SLPDEDPTPRSKEGDSTEEKNFLWGFGDK 227 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~~~----~Vi~~D~rG~G~------S~~~~~~~~~~~~~~~~~~~~~~w~~~~~ 227 (451)
+++||||+||++++...|..+++.|++.+ .|+++|..++|. +...... + -...+|.+
T Consensus 2 ~~~pvvllHG~~~~~~~~~~l~~~L~~~~~~~~~~~~~~v~~~G~~~~~G~~~~~~~~-~-----------~~~~~~~~- 68 (254)
T 3ds8_A 2 DQIPIILIHGSGGNASSLDKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKR-P-----------IIKFGFEQ- 68 (254)
T ss_dssp CCCCEEEECCTTCCTTTTHHHHHHHHHTTCCCCCEEEEEEETTTEEEEESCCCTTCSS-C-----------EEEEEESS-
T ss_pred CCCCEEEECCCCCCcchHHHHHHHHHHhcCCCceEEEEEEcCCCeEEEEEEeccCCCC-C-----------EEEEEecC-
Confidence 46899999999999999999999997654 445555444442 2110000 0 00001110
Q ss_pred CCccccccccCHHHHHHHH----HHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCC-----ccceEEEeccCCCCCCCCC
Q 013006 228 AQPWASELAYSVDLWQDQV----CYFIKEVIREPVYVVGNSLGGFVAVYFAACNPH-----LVKGVTLLNATPFWGFSPN 298 (451)
Q Consensus 228 ~~~~~~~~~~s~~~~a~dv----~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~-----~v~~lvl~~~~~~~~~~~~ 298 (451)
..++++.+++++ ..+.+.++.+++++|||||||.+++.++.++|+ +|+++|+++++.. +.
T Consensus 69 -------~~~~~~~~a~~l~~~i~~l~~~~~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~-g~--- 137 (254)
T 3ds8_A 69 -------NQATPDDWSKWLKIAMEDLKSRYGFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFN-DL--- 137 (254)
T ss_dssp -------TTSCHHHHHHHHHHHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTT-CS---
T ss_pred -------CCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcC-cc---
Confidence 125888888888 455566688999999999999999999999998 8999999997421 00
Q ss_pred CCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHh
Q 013006 299 PIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMF 378 (451)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (451)
........+. ..........+..+
T Consensus 138 ----~~~~~~~~~~----------------------------------~~~~p~~~~~~~~~------------------ 161 (254)
T 3ds8_A 138 ----DPNDNGMDLS----------------------------------FKKLPNSTPQMDYF------------------ 161 (254)
T ss_dssp ----CHHHHCSCTT----------------------------------CSSCSSCCHHHHHH------------------
T ss_pred ----cccccccccc----------------------------------cccCCcchHHHHHH------------------
Confidence 0000000000 00000000000000
Q ss_pred cCCCCCchhHHhhhccCCCCCEEEEeeC------CCCCCChHHHHHHHHHCCC----CcEEEeCC--CCCCccccChHHH
Q 013006 379 APQGNLSFREALSRCQMNGVPICLIYGK------EDPWVKPVWGLQVKRQVPE----APYYEISP--AGHCPHDEVPEVC 446 (451)
Q Consensus 379 ~~~~~~~~~~~~~~l~~i~~PvLii~G~------~D~~v~~~~~~~l~~~lp~----~~~~~i~~--~gH~~~~e~p~~v 446 (451)
......+.. ++|++.|+|+ .|.+||...++.++..+++ .+..++.+ ++|..+.++|+ +
T Consensus 162 --------~~~~~~~~~-~~~vl~I~G~~~~~~~~Dg~Vp~~ss~~l~~~~~~~~~~~~~~~~~g~~a~Hs~l~~~~~-v 231 (254)
T 3ds8_A 162 --------IKNQTEVSP-DLEVLAIAGELSEDNPTDGIVPTISSLATRLFMPGSAKAYIEDIQVGEDAVHQTLHETPK-S 231 (254)
T ss_dssp --------HHTGGGSCT-TCEEEEEEEESBTTBCBCSSSBHHHHTGGGGTSBTTBSEEEEEEEESGGGCGGGGGGSHH-H
T ss_pred --------HHHHhhCCC-CcEEEEEEecCCCCCCCCcEeeHHHHHHHHHHhhccCcceEEEEEeCCCCchhcccCCHH-H
Confidence 111122232 7899999999 9999999999999888875 22345555 77999999997 4
Q ss_pred Hhh
Q 013006 447 SLC 449 (451)
Q Consensus 447 ~~~ 449 (451)
.+.
T Consensus 232 ~~~ 234 (254)
T 3ds8_A 232 IEK 234 (254)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=3.1e-18 Score=166.86 Aligned_cols=209 Identities=13% Similarity=0.011 Sum_probs=126.8
Q ss_pred CCCcEEEecCCCC---Chhc--HHHHHHhhc--CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCc
Q 013006 158 NSPPVLFLPGFGV---GSFH--YEKQLKDLG--KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQP 230 (451)
Q Consensus 158 ~~p~VlllHG~~~---~~~~--~~~~~~~L~--~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 230 (451)
+.|+||++||.+. +... |..++..|+ .++.|+++|+||.+.+..+
T Consensus 112 ~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~~~~---------------------------- 163 (351)
T 2zsh_A 112 IVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYP---------------------------- 163 (351)
T ss_dssp SCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEEEECCCCTTTSCTT----------------------------
T ss_pred CceEEEEECCCcCcCCCCcchhHHHHHHHHHHHcCCEEEEecCCCCCCCCCc----------------------------
Confidence 4588999999543 3333 888999887 4899999999998765311
Q ss_pred cccccccCHHHHHHHHHHHHHH------hCCC-CEEEEEeCcchHHHHHHHHhCCC---ccceEEEeccCCCCCCCCCCC
Q 013006 231 WASELAYSVDLWQDQVCYFIKE------VIRE-PVYVVGNSLGGFVAVYFAACNPH---LVKGVTLLNATPFWGFSPNPI 300 (451)
Q Consensus 231 ~~~~~~~s~~~~a~dv~~ll~~------l~~~-~v~lvGhS~GG~val~~A~~~P~---~v~~lvl~~~~~~~~~~~~~~ 300 (451)
..+++..+.+..+.+. ++.+ +++|+||||||.+|+.+|.++|+ +|+++|++++..... .
T Consensus 164 ------~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~~~~~~~v~~~vl~~p~~~~~-----~ 232 (351)
T 2zsh_A 164 ------CAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESGIDVLGNILLNPMFGGN-----E 232 (351)
T ss_dssp ------HHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHHHTTTCCCCEEEEESCCCCCS-----S
T ss_pred ------hhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHhhccCCCeeEEEEECCccCCC-----c
Confidence 3456666666666553 3456 89999999999999999999998 999999998752100 0
Q ss_pred CchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcC
Q 013006 301 RSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAP 380 (451)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (451)
.......... . ...................... + .+ .
T Consensus 233 ~~~~~~~~~~--~-----------------~~~~~~~~~~~~~~~~~~~~~~-~-----------~~---------~--- 269 (351)
T 2zsh_A 233 RTESEKSLDG--K-----------------YFVTVRDRDWYWKAFLPEGEDR-E-----------HP---------A--- 269 (351)
T ss_dssp CCHHHHHHTT--T-----------------SSCCHHHHHHHHHHHSCTTCCT-T-----------ST---------T---
T ss_pred CChhhhhcCC--C-----------------cccCHHHHHHHHHHhCCCCCCC-C-----------Cc---------c---
Confidence 0000000000 0 0000000111111111000000 0 00 0
Q ss_pred CCCCchhHHhhhccCCCC-CEEEEeeCCCCCCChH--HHHHHHHHCCCCcEEEeCCCCCCccc----cChHHHHhhh
Q 013006 381 QGNLSFREALSRCQMNGV-PICLIYGKEDPWVKPV--WGLQVKRQVPEAPYYEISPAGHCPHD----EVPEVCSLCL 450 (451)
Q Consensus 381 ~~~~~~~~~~~~l~~i~~-PvLii~G~~D~~v~~~--~~~~l~~~lp~~~~~~i~~~gH~~~~----e~p~~v~~~I 450 (451)
..........+.++++ |+|+++|++|.+++.. ..+.+.+...++++++++++||.++. ++++++.+.|
T Consensus 270 --~~~~~~~~~~l~~i~~pP~Lii~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i 344 (351)
T 2zsh_A 270 --CNPFSPRGKSLEGVSFPKSLVVVAGLDLIRDWQLAYAEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEI 344 (351)
T ss_dssp --TCTTSTTSCCCTTCCCCEEEEEEETTSTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTTTSSSCSHHHHHHHHHH
T ss_pred --cCCCCCCccchhhCCCCCEEEEEcCCCcchHHHHHHHHHHHHcCCCEEEEEECCCcEEEEecCCCHHHHHHHHHH
Confidence 0000011234556677 9999999999988632 33444444457899999999999887 7888887765
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=6.1e-19 Score=168.95 Aligned_cols=125 Identities=13% Similarity=0.116 Sum_probs=95.6
Q ss_pred CccceeeecCCeEEEEeecCCCCCCCCcEEEecCCC---CChhcHHHHHHhhc--CCceEEEEcCCCCCCCCCCCCCCCC
Q 013006 134 ITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFG---VGSFHYEKQLKDLG--KDYRAWAIDFLGQGMSLPDEDPTPR 208 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~---~~~~~~~~~~~~L~--~~~~Vi~~D~rG~G~S~~~~~~~~~ 208 (451)
++...+...+| .+.++.+ +...+.|+||++||++ ++...|..+...|+ .++.|+++|+||+|.|..+..
T Consensus 56 ~~~~~i~~~~g-~i~~~~y-~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~Vv~~dyrg~g~~~~p~~---- 129 (311)
T 1jji_A 56 VEDRTIKGRNG-DIRVRVY-QQKPDSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHKFPAA---- 129 (311)
T ss_dssp EEEEEEEETTE-EEEEEEE-ESSSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTTTSCTTHH----
T ss_pred EEEEEecCCCC-cEEEEEE-cCCCCceEEEEECCcccccCChhHhHHHHHHHHHHhCCEEEEecCCCCCCCCCCCc----
Confidence 44455555566 4544443 2223568999999998 78889999999986 489999999999999853211
Q ss_pred CCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCC--CEEEEEeCcchHHHHHHHHhCCCc----cc
Q 013006 209 SKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIRE--PVYVVGNSLGGFVAVYFAACNPHL----VK 282 (451)
Q Consensus 209 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~--~v~lvGhS~GG~val~~A~~~P~~----v~ 282 (451)
..+..+.++++.+.++.++++ +++|+|||+||.+++.+|.++|++ ++
T Consensus 130 ---------------------------~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~ 182 (311)
T 1jji_A 130 ---------------------------VYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIK 182 (311)
T ss_dssp ---------------------------HHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEE
T ss_pred ---------------------------HHHHHHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCce
Confidence 145666677777777777765 899999999999999999988776 99
Q ss_pred eEEEeccCC
Q 013006 283 GVTLLNATP 291 (451)
Q Consensus 283 ~lvl~~~~~ 291 (451)
++|++++..
T Consensus 183 ~~vl~~p~~ 191 (311)
T 1jji_A 183 HQILIYPVV 191 (311)
T ss_dssp EEEEESCCC
T ss_pred EEEEeCCcc
Confidence 999999864
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.7e-18 Score=167.25 Aligned_cols=216 Identities=14% Similarity=0.069 Sum_probs=142.3
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAY 237 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 237 (451)
++++|+|+||++++...|..+++.|..+++|+++|+||+|.+... ..
T Consensus 100 ~~~~l~~lhg~~~~~~~~~~l~~~L~~~~~v~~~d~~g~~~~~~~---------------------------------~~ 146 (329)
T 3tej_A 100 NGPTLFCFHPASGFAWQFSVLSRYLDPQWSIIGIQSPRPNGPMQT---------------------------------AA 146 (329)
T ss_dssp SSCEEEEECCTTSCCGGGGGGGGTSCTTCEEEEECCCTTTSHHHH---------------------------------CS
T ss_pred CCCcEEEEeCCcccchHHHHHHHhcCCCCeEEEeeCCCCCCCCCC---------------------------------CC
Confidence 468999999999999999999999988999999999999887421 15
Q ss_pred CHHHHHHHHHHHHHHh-CCCCEEEEEeCcchHHHHHHHHh---CCCccceEEEeccCCCCCCCCCCCCchHHhhhcC-CC
Q 013006 238 SVDLWQDQVCYFIKEV-IREPVYVVGNSLGGFVAVYFAAC---NPHLVKGVTLLNATPFWGFSPNPIRSPKLARILP-WS 312 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l-~~~~v~lvGhS~GG~val~~A~~---~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-~~ 312 (451)
+++++++++.+.+..+ ..++++|+||||||.+++.+|.+ +|++|++++++++.+.. ...... ..
T Consensus 147 ~~~~~a~~~~~~i~~~~~~~~~~l~G~S~Gg~ia~~~a~~L~~~~~~v~~lvl~d~~~~~-----------~~~~~~~~~ 215 (329)
T 3tej_A 147 NLDEVCEAHLATLLEQQPHGPYYLLGYSLGGTLAQGIAARLRARGEQVAFLGLLDTWPPE-----------TQNWQEKEA 215 (329)
T ss_dssp SHHHHHHHHHHHHHHHCSSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCTH-----------HHHTC----
T ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEEccCHHHHHHHHHHHHhcCCcccEEEEeCCCCCC-----------ccccccccc
Confidence 8999999988888776 55799999999999999999999 99999999999986421 000000 00
Q ss_pred CCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhc-CCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhh
Q 013006 313 GTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYAD-HATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALS 391 (451)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (451)
... -......+.. .....+.. ........+..+..... .....+. ..
T Consensus 216 ~~~-~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~-----------~~ 263 (329)
T 3tej_A 216 NGL-DPEVLAEINR--------------EREAFLAAQQGSTSTELFTTIEGNYA------DAVRLLT-----------TA 263 (329)
T ss_dssp -CC-CCTHHHHHHH--------------HHHHHHHTTCCCSCCHHHHHHHHHHH------HHHHHHT-----------TC
T ss_pred ccc-ChhhHHHHHH--------------HHHHHHHhccccccHHHHHHHHHHHH------HHHHHHh-----------cC
Confidence 000 0011111100 00001111 01111122222111100 0000000 00
Q ss_pred hccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccCh--HHHHhhh
Q 013006 392 RCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVP--EVCSLCL 450 (451)
Q Consensus 392 ~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p--~~v~~~I 450 (451)
....+++|++++.|++|...+......+.+..++.+++.++ +||+.+++.| +++++.|
T Consensus 264 ~~~~~~~pv~l~~~~~d~~~~~~~~~~w~~~~~~~~~~~v~-g~H~~~~~~~~~~~ia~~l 323 (329)
T 3tej_A 264 HSVPFDGKATLFVAERTLQEGMSPERAWSPWIAELDIYRQD-CAHVDIISPGTFEKIGPII 323 (329)
T ss_dssp CCCCEEEEEEEEEEGGGCCTTCCHHHHHTTTEEEEEEEEES-SCGGGGGSTTTHHHHHHHH
T ss_pred CCCCcCCCeEEEEeccCCCCCCCchhhHHHhcCCcEEEEec-CChHHhCCChHHHHHHHHH
Confidence 13456899999999999887776666777777888999997 7999998887 6676654
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=99.77 E-value=9.7e-19 Score=165.25 Aligned_cols=95 Identities=15% Similarity=0.188 Sum_probs=84.1
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAY 237 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 237 (451)
++++|||+||++++...|..+++.|. ++|+++|+++... .+
T Consensus 23 ~~~~l~~~hg~~~~~~~~~~~~~~L~--~~v~~~d~~~~~~-------------------------------------~~ 63 (283)
T 3tjm_A 23 SERPLFLVHPIEGSTTVFHSLASRLS--IPTYGLQCTRAAP-------------------------------------LD 63 (283)
T ss_dssp SSCCEEEECCTTCCSGGGHHHHHHCS--SCEEEECCCTTSC-------------------------------------CS
T ss_pred CCCeEEEECCCCCCHHHHHHHHHhcC--ceEEEEecCCCCC-------------------------------------CC
Confidence 46899999999999999999999998 9999999964211 16
Q ss_pred CHHHHHHHHHHHHHHhCC-CCEEEEEeCcchHHHHHHHHhC---CCccc---eEEEeccCC
Q 013006 238 SVDLWQDQVCYFIKEVIR-EPVYVVGNSLGGFVAVYFAACN---PHLVK---GVTLLNATP 291 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l~~-~~v~lvGhS~GG~val~~A~~~---P~~v~---~lvl~~~~~ 291 (451)
+++++++++.++++.+.. ++++|+||||||.+|+.+|.++ |++|. +++++++.+
T Consensus 64 ~~~~~a~~~~~~i~~~~~~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~~~~lvlid~~~ 124 (283)
T 3tjm_A 64 SIHSLAAYYIDCIRQVQPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSP 124 (283)
T ss_dssp CHHHHHHHHHHHHTTTCCSSCCEEEEETHHHHHHHHHHHHHHHHHTTSCCCCEEEEESCCT
T ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEcCCc
Confidence 999999999999999865 7999999999999999999976 88899 999999864
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.9e-18 Score=171.47 Aligned_cols=100 Identities=19% Similarity=0.321 Sum_probs=78.8
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELA 236 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 236 (451)
..|+||++||++++.. ..++..|+ +||.|+++|+||+|.+......
T Consensus 157 ~~P~Vv~~hG~~~~~~--~~~a~~La~~Gy~V~a~D~rG~g~~~~~~~~------------------------------- 203 (422)
T 3k2i_A 157 PFPGIIDIFGIGGGLL--EYRASLLAGHGFATLALAYYNFEDLPNNMDN------------------------------- 203 (422)
T ss_dssp CBCEEEEECCTTCSCC--CHHHHHHHTTTCEEEEEECSSSTTSCSSCSC-------------------------------
T ss_pred CcCEEEEEcCCCcchh--HHHHHHHHhCCCEEEEEccCCCCCCCCCccc-------------------------------
Confidence 4689999999987643 34467775 5799999999999987533211
Q ss_pred cCHHHHHHHHHHHHHHhC--CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 237 YSVDLWQDQVCYFIKEVI--REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 237 ~s~~~~a~dv~~ll~~l~--~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
+.++++.+.+..+.+... .++++|+||||||.+++.+|.++|+ |+++|++++..
T Consensus 204 ~~~~d~~~~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~ 259 (422)
T 3k2i_A 204 ISLEYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN-VSATVSINGSG 259 (422)
T ss_dssp EETHHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS-EEEEEEESCCS
T ss_pred CCHHHHHHHHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC-ccEEEEEcCcc
Confidence 466777777766665543 4799999999999999999999998 99999999764
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.77 E-value=4e-18 Score=153.65 Aligned_cols=178 Identities=13% Similarity=0.083 Sum_probs=121.8
Q ss_pred CCCCcEEEecCCCCChhcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccc
Q 013006 157 VNSPPVLFLPGFGVGSFHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASEL 235 (451)
Q Consensus 157 ~~~p~VlllHG~~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 235 (451)
+.+++|||+||++++...|..+++.|. +++.|+++|.+|++.-+...... . ..-
T Consensus 20 ~a~~~Vv~lHG~G~~~~~~~~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~------------------------~-~~~ 74 (210)
T 4h0c_A 20 RAKKAVVMLHGRGGTAADIISLQKVLKLDEMAIYAPQATNNSWYPYSFMAP------------------------V-QQN 74 (210)
T ss_dssp TCSEEEEEECCTTCCHHHHHGGGGTSSCTTEEEEEECCGGGCSSSSCTTSC------------------------G-GGG
T ss_pred cCCcEEEEEeCCCCCHHHHHHHHHHhCCCCeEEEeecCCCCCccccccCCC------------------------c-ccc
Confidence 346789999999999999999988886 47999999999876422111000 0 000
Q ss_pred ccCHHHHHHHHHHHHHHh---CC--CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcC
Q 013006 236 AYSVDLWQDQVCYFIKEV---IR--EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILP 310 (451)
Q Consensus 236 ~~s~~~~a~dv~~ll~~l---~~--~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 310 (451)
...+++..+.+..+++.+ ++ ++++|+|+|+||++++.++.++|++++++|.+++... ..
T Consensus 75 ~~~~~~~~~~i~~~~~~~~~~~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~-----~~----------- 138 (210)
T 4h0c_A 75 QPALDSALALVGEVVAEIEAQGIPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLI-----GQ----------- 138 (210)
T ss_dssp TTHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCC-----SS-----------
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCC-----Ch-----------
Confidence 124455555555555443 33 6899999999999999999999999999999986310 00
Q ss_pred CCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHh
Q 013006 311 WSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREAL 390 (451)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (451)
. . ......
T Consensus 139 --------------------------------------~-~---------------------------------~~~~~~ 146 (210)
T 4h0c_A 139 --------------------------------------E-L---------------------------------AIGNYK 146 (210)
T ss_dssp --------------------------------------S-C---------------------------------CGGGCC
T ss_pred --------------------------------------h-h---------------------------------hhhhhh
Confidence 0 0 000000
Q ss_pred hhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC----CCcEEEeCCCCCCccccChHHHHhh
Q 013006 391 SRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP----EAPYYEISPAGHCPHDEVPEVCSLC 449 (451)
Q Consensus 391 ~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp----~~~~~~i~~~gH~~~~e~p~~v~~~ 449 (451)
. ...++|++++||++|+++|.+.++++.+.+. +++++++|+.||.+..|.-+.+.+.
T Consensus 147 ~--~~~~~Pvl~~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~~ypg~gH~i~~~el~~i~~w 207 (210)
T 4h0c_A 147 G--DFKQTPVFISTGNPDPHVPVSRVQESVTILEDMNAAVSQVVYPGRPHTISGDEIQLVNNT 207 (210)
T ss_dssp B--CCTTCEEEEEEEESCTTSCHHHHHHHHHHHHHTTCEEEEEEEETCCSSCCHHHHHHHHHT
T ss_pred h--hccCCceEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCcCHHHHHHHHHH
Confidence 0 1126799999999999999998887666543 4678899999998765444444443
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.76 E-value=4.7e-17 Score=152.85 Aligned_cols=236 Identities=12% Similarity=0.055 Sum_probs=132.9
Q ss_pred eeecCCeEEEEeecCCCCCCCCcEEEecCCC---CChhcH-HHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013006 139 WEWKPKFNVHYEKAGCENVNSPPVLFLPGFG---VGSFHY-EKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGD 213 (451)
Q Consensus 139 ~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~---~~~~~~-~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~ 213 (451)
++..+|.++++..... ...|+||++||.+ ++...| ..+...|++ +++|+++|+|+.+.
T Consensus 9 ~~~~~~~~~~~y~p~~--~~~p~iv~~HGGg~~~g~~~~~~~~~~~~l~~~g~~Vi~vdYrlaPe--------------- 71 (274)
T 2qru_A 9 QTLANGATVTIYPTTT--EPTNYVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLLAPN--------------- 71 (274)
T ss_dssp EECTTSCEEEEECCSS--SSCEEEEEECCSTTTSCCGGGCCHHHHHHHHTTTEEEEEECCCCTTT---------------
T ss_pred ccccCCeeEEEEcCCC--CCCcEEEEEeCccccCCChhhchHHHHHHHHHCCCEEEEeCCCCCCC---------------
Confidence 4455778887765432 3568999999987 555555 556676755 79999999997542
Q ss_pred chhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhC-----CCCEEEEEeCcchHHHHHHHH---hCCCccceEE
Q 013006 214 STEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI-----REPVYVVGNSLGGFVAVYFAA---CNPHLVKGVT 285 (451)
Q Consensus 214 ~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~-----~~~v~lvGhS~GG~val~~A~---~~P~~v~~lv 285 (451)
..+...++|+.++++.+. .++++|+|+|+||.+|+.+|. .+|.++++++
T Consensus 72 -----------------------~~~p~~~~D~~~al~~l~~~~~~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~v 128 (274)
T 2qru_A 72 -----------------------TKIDHILRTLTETFQLLNEEIIQNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLV 128 (274)
T ss_dssp -----------------------SCHHHHHHHHHHHHHHHHHHTTTTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEE
T ss_pred -----------------------CCCcHHHHHHHHHHHHHHhccccCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEE
Confidence 244555666666555543 789999999999999999997 3678899999
Q ss_pred EeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhcc
Q 013006 286 LLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQ 365 (451)
Q Consensus 286 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (451)
++.+.....+.. +... ....+.. ...... ..... ...... ....+..+.....
T Consensus 129 l~~~~~~~~~~~-~~~~----~~~~~~~----~~~~~~--------~~~~~--------~~~~~~--~~~~~~~~~~~~~ 181 (274)
T 2qru_A 129 NFYGYTDLEFIK-EPRK----LLKQAIS----AKEIAA--------IDQTK--------PVWDDP--FLSRYLLYHYSIQ 181 (274)
T ss_dssp EESCCSCSGGGG-SCCC----SCSSCCC----SGGGTT--------SCCSS--------CCSCCT--TCTTHHHHHHHHH
T ss_pred EEcccccccccC-Cchh----hcccccc----HHHHhh--------hcccC--------CCCCCc--cccchhhhhhhhh
Confidence 987643210000 0000 0000000 000000 00000 000000 0000000000000
Q ss_pred ChhHHHHHHHHHhcCCCC-CchhHH-hhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccCh
Q 013006 366 HPAAAASFASIMFAPQGN-LSFREA-LSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVP 443 (451)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~-~~~~~~-~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p 443 (451)
.... ..+....... ...... ...+..+ .|++|++|+.|+.++...++++++.+++++++++++++|.++.+.+
T Consensus 182 ~~~~----~~~~~~~~~~~~~~~~~~~~~l~~l-pP~li~~G~~D~~~~~~~~~~l~~~~~~~~l~~~~g~~H~~~~~~~ 256 (274)
T 2qru_A 182 QALL----PHFYGLPENGDWSAYALSDETLKTF-PPCFSTASSSDEEVPFRYSKKIGRTIPESTFKAVYYLEHDFLKQTK 256 (274)
T ss_dssp TTCH----HHHHTCCTTSCCGGGCCCHHHHHTS-CCEEEEEETTCSSSCTHHHHHHHHHSTTCEEEEECSCCSCGGGGTT
T ss_pred hcch----hhccCcccccccccCCCChhhhcCC-CCEEEEEecCCCCcCHHHHHHHHHhCCCcEEEEcCCCCcCCccCcC
Confidence 0000 0000000000 000000 1133455 7999999999999999999999999999999999999999887765
Q ss_pred HHH
Q 013006 444 EVC 446 (451)
Q Consensus 444 ~~v 446 (451)
...
T Consensus 257 ~~~ 259 (274)
T 2qru_A 257 DPS 259 (274)
T ss_dssp SHH
T ss_pred CHH
Confidence 543
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.76 E-value=5.1e-18 Score=163.26 Aligned_cols=127 Identities=11% Similarity=-0.070 Sum_probs=90.1
Q ss_pred CccceeeecCCe-EEEEeecCCC--CCCCCcEEEecCCC---CChhcHHHHHHhhcC--CceEEEEcCCCCCCCCCCCCC
Q 013006 134 ITSCFWEWKPKF-NVHYEKAGCE--NVNSPPVLFLPGFG---VGSFHYEKQLKDLGK--DYRAWAIDFLGQGMSLPDEDP 205 (451)
Q Consensus 134 ~~~~~~~~~~g~-~l~y~~~g~~--~~~~p~VlllHG~~---~~~~~~~~~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~ 205 (451)
++...+...+|. ++.+..+.+. ....|+||++||++ ++...|..++..|++ +|.|+++|+||+|.+..+..
T Consensus 51 ~~~~~i~~~~g~~~l~~~~~~P~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~G~~Vv~~d~rg~~~~~~~~~- 129 (323)
T 1lzl_A 51 LRELSAPGLDGDPEVKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPETTFPGP- 129 (323)
T ss_dssp EEEEEECCSTTCCCEEEEEEEESSCCSCEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTTTSCTTHH-
T ss_pred EEEEEecCCCCCceeEEEEEecCCCCCCCcEEEEECCCccccCChhhhHHHHHHHHHhcCcEEEEecCCCCCCCCCCch-
Confidence 334444445564 4444443332 23458999999998 888889999988854 89999999999998753210
Q ss_pred CCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhCCC----
Q 013006 206 TPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACNPH---- 279 (451)
Q Consensus 206 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~P~---- 279 (451)
..+..+.++.+.+.++.+++ ++++|+|||+||.+++.+|.++|+
T Consensus 130 ------------------------------~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~ 179 (323)
T 1lzl_A 130 ------------------------------VNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVV 179 (323)
T ss_dssp ------------------------------HHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSS
T ss_pred ------------------------------HHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCC
Confidence 12344444455444556665 689999999999999999998776
Q ss_pred ccceEEEeccCC
Q 013006 280 LVKGVTLLNATP 291 (451)
Q Consensus 280 ~v~~lvl~~~~~ 291 (451)
.+++++++++..
T Consensus 180 ~~~~~vl~~p~~ 191 (323)
T 1lzl_A 180 PVAFQFLEIPEL 191 (323)
T ss_dssp CCCEEEEESCCC
T ss_pred CeeEEEEECCcc
Confidence 499999999853
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.76 E-value=2.9e-19 Score=170.35 Aligned_cols=194 Identities=12% Similarity=0.050 Sum_probs=124.0
Q ss_pred CCCCcEEEecCC---CCChhcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccc
Q 013006 157 VNSPPVLFLPGF---GVGSFHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWA 232 (451)
Q Consensus 157 ~~~p~VlllHG~---~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 232 (451)
.+.|+|||+||. .++...|..++..|+ +||.|+++|+||+|.+..+.
T Consensus 80 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~r~~~~~~~~~----------------------------- 130 (303)
T 4e15_A 80 NQAPLFVFVHGGYWQEMDMSMSCSIVGPLVRRGYRVAVMDYNLCPQVTLEQ----------------------------- 130 (303)
T ss_dssp TTCCEEEEECCSTTTSCCGGGSCTTHHHHHHTTCEEEEECCCCTTTSCHHH-----------------------------
T ss_pred CCCCEEEEECCCcCcCCChhHHHHHHHHHHhCCCEEEEecCCCCCCCChhH-----------------------------
Confidence 357999999994 456667777788774 58999999999998753110
Q ss_pred cccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCC-------CccceEEEeccCCCCCCCCCCCCchHH
Q 013006 233 SELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNP-------HLVKGVTLLNATPFWGFSPNPIRSPKL 305 (451)
Q Consensus 233 ~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P-------~~v~~lvl~~~~~~~~~~~~~~~~~~~ 305 (451)
...++.+.++.+.+..+.++.++++|+||||||.+++.++.+.+ ++|+++|++++...+ ...
T Consensus 131 --~~~d~~~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~---------~~~ 199 (303)
T 4e15_A 131 --LMTQFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDL---------REL 199 (303)
T ss_dssp --HHHHHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCC---------HHH
T ss_pred --HHHHHHHHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeecc---------Hhh
Confidence 00122223333333334667789999999999999999998754 379999999975310 000
Q ss_pred hhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCc
Q 013006 306 ARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLS 385 (451)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (451)
.... + ......+...... ...
T Consensus 200 ~~~~-------------------------~----~~~~~~~~~~~~~------------------------------~~~ 220 (303)
T 4e15_A 200 SNLE-------------------------S----VNPKNILGLNERN------------------------------IES 220 (303)
T ss_dssp HTCT-------------------------T----TSGGGTTCCCTTT------------------------------TTT
T ss_pred hccc-------------------------c----cchhhhhcCCHHH------------------------------HHH
Confidence 0000 0 0000000000000 000
Q ss_pred hhHHhhhcc----CCCCCEEEEeeCCCCCCChHHHHHHHHHCC----CCcEEEeCCCCCCccccChHHHHhh
Q 013006 386 FREALSRCQ----MNGVPICLIYGKEDPWVKPVWGLQVKRQVP----EAPYYEISPAGHCPHDEVPEVCSLC 449 (451)
Q Consensus 386 ~~~~~~~l~----~i~~PvLii~G~~D~~v~~~~~~~l~~~lp----~~~~~~i~~~gH~~~~e~p~~v~~~ 449 (451)
.......+. .+++|+|+++|++|.+++...++++.+.++ +++++++++++|+.+++.+.+.+..
T Consensus 221 ~sp~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~ 292 (303)
T 4e15_A 221 VSPMLWEYTDVTVWNSTKIYVVAAEHDSTTFIEQSRHYADVLRKKGYKASFTLFKGYDHFDIIEETAIDDSD 292 (303)
T ss_dssp TCGGGCCCCCGGGGTTSEEEEEEEEESCHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETTHHHHGGGSTTSH
T ss_pred cCchhhcccccccCCCCCEEEEEeCCCCCCchHHHHHHHHHHHHCCCceEEEEeCCCCchHHHHHHhCCCcH
Confidence 001111222 238999999999999999999988887775 4689999999999999887765543
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.4e-17 Score=152.04 Aligned_cols=211 Identities=12% Similarity=0.106 Sum_probs=130.3
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcC-C--ceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhcc--ccCCCCCCccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGK-D--YRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFL--WGFGDKAQPWA 232 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~-~--~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~--w~~~~~~~~~~ 232 (451)
+.+||||+||++++...|..+++.|.+ + ++|+.+|.+++|.+......... ..+.+ .+|.+..
T Consensus 5 ~~~pvvliHG~~~~~~~~~~l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~--------~~~P~i~v~f~~n~---- 72 (249)
T 3fle_A 5 KTTATLFLHGYGGSERSETFMVKQALNKNVTNEVITARVSSEGKVYFDKKLSED--------AANPIVKVEFKDNK---- 72 (249)
T ss_dssp CCEEEEEECCTTCCGGGTHHHHHHHHTTTSCSCEEEEEECSSCCEEESSCCC----------CCSCEEEEEESSTT----
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHHcCCCceEEEEEECCCCCEEEccccccc--------cCCCeEEEEcCCCC----
Confidence 457999999999999999999999966 4 47999999999986322111000 00000 1111110
Q ss_pred cccccCHHHHHHHHHHHHHH----hCCCCEEEEEeCcchHHHHHHHHhCCC-----ccceEEEeccCCCCCCCCCCCCch
Q 013006 233 SELAYSVDLWQDQVCYFIKE----VIREPVYVVGNSLGGFVAVYFAACNPH-----LVKGVTLLNATPFWGFSPNPIRSP 303 (451)
Q Consensus 233 ~~~~~s~~~~a~dv~~ll~~----l~~~~v~lvGhS~GG~val~~A~~~P~-----~v~~lvl~~~~~~~~~~~~~~~~~ 303 (451)
..++.++++++.++++. ++++++++|||||||.+++.++.++|+ +|+++|+++++.. +...... ..
T Consensus 73 ---~~~~~~~~~~l~~~i~~l~~~~~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~-g~~~~~~-~~ 147 (249)
T 3fle_A 73 ---NGNFKENAYWIKEVLSQLKSQFGIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYN-GILNMNE-NV 147 (249)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTT-CCTTTSS-CT
T ss_pred ---CccHHHHHHHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccC-CcccccC-Cc
Confidence 12555555555555554 478999999999999999999999874 7999999987421 1110000 00
Q ss_pred HHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCC
Q 013006 304 KLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGN 383 (451)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (451)
....+.. ..........+..+
T Consensus 148 ~~~~~~~------------------------------------~g~p~~~~~~~~~l----------------------- 168 (249)
T 3fle_A 148 NEIIVDK------------------------------------QGKPSRMNAAYRQL----------------------- 168 (249)
T ss_dssp TTSCBCT------------------------------------TCCBSSCCHHHHHT-----------------------
T ss_pred chhhhcc------------------------------------cCCCcccCHHHHHH-----------------------
Confidence 0000000 00000000111110
Q ss_pred CchhHHhhhccCCCCCEEEEeeC------CCCCCChHHHHHHHHHCCCC----cEEEeCC--CCCCccccChHHHH
Q 013006 384 LSFREALSRCQMNGVPICLIYGK------EDPWVKPVWGLQVKRQVPEA----PYYEISP--AGHCPHDEVPEVCS 447 (451)
Q Consensus 384 ~~~~~~~~~l~~i~~PvLii~G~------~D~~v~~~~~~~l~~~lp~~----~~~~i~~--~gH~~~~e~p~~v~ 447 (451)
......+.+.++|||.|+|+ .|..||...++.+...+++. +.+++.| +.|..+.++|+.+.
T Consensus 169 ---~~~~~~~p~~~~~vl~I~G~~~~~~~sDG~V~~~Sa~~~~~l~~~~~~~y~e~~v~g~~a~Hs~l~~n~~V~~ 241 (249)
T 3fle_A 169 ---LSLYKIYCGKEIEVLNIYGDLEDGSHSDGRVSNSSSQSLQYLLRGSTKSYQEMKFKGAKAQHSQLHENKDVAN 241 (249)
T ss_dssp ---GGGHHHHTTTTCEEEEEEEECCSSSCBSSSSBHHHHHTHHHHSTTCSSEEEEEEEESGGGSTGGGGGCHHHHH
T ss_pred ---HHHHhhCCccCCeEEEEeccCCCCCCCCCcccHHHHHHHHHHHhhCCCceEEEEEeCCCCchhccccCHHHHH
Confidence 01123344468999999998 69999999998888777652 3455655 89999999885443
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.75 E-value=2.5e-18 Score=183.15 Aligned_cols=224 Identities=12% Similarity=0.044 Sum_probs=143.5
Q ss_pred CccceeeecCCeEEEEeecCCCC----CCCCcEEEecCCCCCh---hcHH--HHHHhhc-CCceEEEEcCCCCCCCCCCC
Q 013006 134 ITSCFWEWKPKFNVHYEKAGCEN----VNSPPVLFLPGFGVGS---FHYE--KQLKDLG-KDYRAWAIDFLGQGMSLPDE 203 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y~~~g~~~----~~~p~VlllHG~~~~~---~~~~--~~~~~L~-~~~~Vi~~D~rG~G~S~~~~ 203 (451)
.....+...+| ++++....|.+ .+.|+||++||.+.+. ..|. .....|+ ++|.|+++|+||+|.+....
T Consensus 468 ~~~~~~~~~~g-~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~vv~~d~rG~g~~g~~~ 546 (723)
T 1xfd_A 468 VEYRDIEIDDY-NLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKL 546 (723)
T ss_dssp CCBCCEEETTE-EECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHH
T ss_pred ceEEEEEcCCc-eEEEEEEeCCCCCCCCccCEEEEEcCCCCccccCccccccHHHHHhhcCCEEEEEECCCCCccccHHH
Confidence 33445566788 88888776643 2357899999998762 2333 4555675 58999999999999852100
Q ss_pred CCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh--CCCCEEEEEeCcchHHHHHHHHhC----
Q 013006 204 DPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV--IREPVYVVGNSLGGFVAVYFAACN---- 277 (451)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l--~~~~v~lvGhS~GG~val~~A~~~---- 277 (451)
... ....| ....++++++.+..+.+.- +.++++|+||||||++++.+|.++
T Consensus 547 ~~~-----------~~~~~------------~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~ 603 (723)
T 1xfd_A 547 LHE-----------VRRRL------------GLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQ 603 (723)
T ss_dssp HHT-----------TTTCT------------TTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTT
T ss_pred HHH-----------HHhcc------------CcccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHHHHhccccC
Confidence 000 00000 0135566666666554431 346899999999999999999999
Q ss_pred CCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHH
Q 013006 278 PHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVF 357 (451)
Q Consensus 278 P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (451)
|++++++|++++...+... ... . ....+........
T Consensus 604 p~~~~~~v~~~~~~~~~~~---------------------~~~-----------------~---~~~~~~~~~~~~~--- 639 (723)
T 1xfd_A 604 GQTFTCGSALSPITDFKLY---------------------ASA-----------------F---SERYLGLHGLDNR--- 639 (723)
T ss_dssp CCCCSEEEEESCCCCTTSS---------------------BHH-----------------H---HHHHHCCCSSCCS---
T ss_pred CCeEEEEEEccCCcchHHh---------------------hhh-----------------c---cHhhcCCccCChh---
Confidence 9999999999985421100 000 0 0000000000000
Q ss_pred HHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccCCC-CCEEEEeeCCCCCCChHHHHHHHHHC----CCCcEEEeC
Q 013006 358 TRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNG-VPICLIYGKEDPWVKPVWGLQVKRQV----PEAPYYEIS 432 (451)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-~PvLii~G~~D~~v~~~~~~~l~~~l----p~~~~~~i~ 432 (451)
.+........+.+++ +|+|+++|++|..+|++.++++.+.+ ++++++++|
T Consensus 640 -------------------------~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~ 694 (723)
T 1xfd_A 640 -------------------------AYEMTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYP 694 (723)
T ss_dssp -------------------------STTTTCTHHHHTSCCSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEET
T ss_pred -------------------------HHHhcChhhHHhhcCCCCEEEEEeCCCCCcCHhHHHHHHHHHHHCCCCeEEEEEC
Confidence 000011223456778 89999999999999999888887766 457899999
Q ss_pred CCCCCc-cccChHHHHhhh
Q 013006 433 PAGHCP-HDEVPEVCSLCL 450 (451)
Q Consensus 433 ~~gH~~-~~e~p~~v~~~I 450 (451)
++||.+ +.+.++++.+.|
T Consensus 695 ~~~H~~~~~~~~~~~~~~i 713 (723)
T 1xfd_A 695 DESHYFTSSSLKQHLYRSI 713 (723)
T ss_dssp TCCSSCCCHHHHHHHHHHH
T ss_pred CCCcccccCcchHHHHHHH
Confidence 999998 667788777655
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=5.1e-18 Score=166.05 Aligned_cols=129 Identities=16% Similarity=-0.009 Sum_probs=92.4
Q ss_pred cceeeecCCeEEEEeecCCCCC--CCCcEEEecCCC---CChh--cHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCC
Q 013006 136 SCFWEWKPKFNVHYEKAGCENV--NSPPVLFLPGFG---VGSF--HYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTP 207 (451)
Q Consensus 136 ~~~~~~~~g~~l~y~~~g~~~~--~~p~VlllHG~~---~~~~--~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~ 207 (451)
...+...+|..|++..+.+... +.|+||++||.+ ++.. .|..+...|+ .++.|+++|+||+|.|... .+.+
T Consensus 84 ~~~~~~~~g~~l~~~v~~p~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~la~~g~~vv~~d~r~~gg~~~~-~~~~ 162 (361)
T 1jkm_A 84 TETILGVDGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEGH-HPFP 162 (361)
T ss_dssp EEEEECTTSCEEEEEEEEETTCCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTEE-CCTT
T ss_pred eeeeecCCCCeEEEEEEeCCCCCCCCeEEEEEcCCccccCCCcccchhHHHHHHHhCCCEEEEEecCCCCCCCCC-CCCC
Confidence 3344556775555554433221 348999999987 7777 8888888886 6899999999999866421 1100
Q ss_pred CCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHh-----CCCccc
Q 013006 208 RSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAAC-----NPHLVK 282 (451)
Q Consensus 208 ~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~-----~P~~v~ 282 (451)
....+....++.+.+.++.++.++++|+|||+||.+++.++.. +|++++
T Consensus 163 --------------------------~~~~D~~~~~~~v~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~ 216 (361)
T 1jkm_A 163 --------------------------SGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAID 216 (361)
T ss_dssp --------------------------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCS
T ss_pred --------------------------ccHHHHHHHHHHHHhhHHhcCCCeEEEEEECHHHHHHHHHHHHHHhcCCCcCcc
Confidence 0012334445555566666788899999999999999999998 888999
Q ss_pred eEEEeccCC
Q 013006 283 GVTLLNATP 291 (451)
Q Consensus 283 ~lvl~~~~~ 291 (451)
++|++++..
T Consensus 217 ~~il~~~~~ 225 (361)
T 1jkm_A 217 GVYASIPYI 225 (361)
T ss_dssp EEEEESCCC
T ss_pred eEEEECCcc
Confidence 999999853
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.75 E-value=8.4e-18 Score=169.20 Aligned_cols=100 Identities=16% Similarity=0.267 Sum_probs=79.0
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELA 236 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 236 (451)
..|+||++||++.+...+ .+..|+ +||.|+++|+||+|.+..... .
T Consensus 173 ~~P~Vv~lhG~~~~~~~~--~a~~La~~Gy~Vla~D~rG~~~~~~~~~-------------------------------~ 219 (446)
T 3hlk_A 173 PFPGIVDMFGTGGGLLEY--RASLLAGKGFAVMALAYYNYEDLPKTME-------------------------------T 219 (446)
T ss_dssp CBCEEEEECCSSCSCCCH--HHHHHHTTTCEEEEECCSSSTTSCSCCS-------------------------------E
T ss_pred CCCEEEEECCCCcchhhH--HHHHHHhCCCEEEEeccCCCCCCCcchh-------------------------------h
Confidence 468999999998764444 367775 589999999999998753221 1
Q ss_pred cCHHHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 237 YSVDLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 237 ~s~~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
..++++.+.+..+.+..++ ++++|+||||||.+++.+|.++|+ |+++|++++..
T Consensus 220 ~~~~d~~~a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~ 275 (446)
T 3hlk_A 220 LHLEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG-ITAAVVINGSV 275 (446)
T ss_dssp EEHHHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC-EEEEEEESCCS
T ss_pred CCHHHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC-ceEEEEEcCcc
Confidence 4677777777766665543 789999999999999999999997 99999998864
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.75 E-value=3.2e-17 Score=153.94 Aligned_cols=132 Identities=17% Similarity=0.273 Sum_probs=92.9
Q ss_pred ecCCeEEEEeecCCC----CCCCCcEEEecCCCCChhcHHHH---HHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCC
Q 013006 141 WKPKFNVHYEKAGCE----NVNSPPVLFLPGFGVGSFHYEKQ---LKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEG 212 (451)
Q Consensus 141 ~~~g~~l~y~~~g~~----~~~~p~VlllHG~~~~~~~~~~~---~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~ 212 (451)
..+|.++.+..+-|. +.+.|+||++||++.+...|... ...+. .++.|+++|.+++|.+.....
T Consensus 25 ~~~g~~~~~~v~~P~~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~pd~~~~g~~~~~~~-------- 96 (280)
T 3i6y_A 25 NTLNCAMRFAIYLPPQASTGAKVPVLYWLSGLTCSDENFMQKAGAQRLAAELGIAIVAPDTSPRGEGVADDE-------- 96 (280)
T ss_dssp TTTTEEEEEEEEECGGGGTTCCEEEEEEECCTTCCSSHHHHHSCCHHHHHHHTCEEEEECSSCCSTTCCCCS--------
T ss_pred cccCCeeEEEEEeCCCCCCCCCccEEEEecCCCCChhHHhhcccHHHHHhhCCeEEEEeCCcccccccCccc--------
Confidence 346777777776554 23458999999999988888764 33343 379999999999998754321
Q ss_pred CchhhhhccccCCCCC--------CccccccccC-HHHHHHHHHHHHHH-hCC-CCEEEEEeCcchHHHHHHHHhCCCcc
Q 013006 213 DSTEEKNFLWGFGDKA--------QPWASELAYS-VDLWQDQVCYFIKE-VIR-EPVYVVGNSLGGFVAVYFAACNPHLV 281 (451)
Q Consensus 213 ~~~~~~~~~w~~~~~~--------~~~~~~~~~s-~~~~a~dv~~ll~~-l~~-~~v~lvGhS~GG~val~~A~~~P~~v 281 (451)
.|.++... .++.. .+. .+.+++++..+++. +.. ++++|+||||||.+++.+|.++|+++
T Consensus 97 --------~~~~G~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~ 166 (280)
T 3i6y_A 97 --------GYDLGQGAGFYVNATQAPWNR--HYQMYDYVVNELPELIESMFPVSDKRAIAGHSMGGHGALTIALRNPERY 166 (280)
T ss_dssp --------STTSSTTCCTTCBCCSTTGGG--TCBHHHHHHTHHHHHHHHHSSEEEEEEEEEETHHHHHHHHHHHHCTTTC
T ss_pred --------ccccccCccccccccCCCccc--hhhHHHHHHHHHHHHHHHhCCCCCCeEEEEECHHHHHHHHHHHhCCccc
Confidence 23222111 11111 112 34455777777754 454 78999999999999999999999999
Q ss_pred ceEEEeccC
Q 013006 282 KGVTLLNAT 290 (451)
Q Consensus 282 ~~lvl~~~~ 290 (451)
++++++++.
T Consensus 167 ~~~v~~s~~ 175 (280)
T 3i6y_A 167 QSVSAFSPI 175 (280)
T ss_dssp SCEEEESCC
T ss_pred cEEEEeCCc
Confidence 999999985
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=5.1e-18 Score=162.67 Aligned_cols=99 Identities=16% Similarity=0.173 Sum_probs=84.7
Q ss_pred CCCcEEEecCCCCChhc-HH-HHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccc
Q 013006 158 NSPPVLFLPGFGVGSFH-YE-KQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASE 234 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~-~~-~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 234 (451)
.+++|||+||++++... |. .+.+.|.+ +|+|+++|+||||.+..
T Consensus 30 ~~~~VvllHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~~g~g~~~~--------------------------------- 76 (317)
T 1tca_A 30 VSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDT--------------------------------- 76 (317)
T ss_dssp CSSEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCSCH---------------------------------
T ss_pred CCCeEEEECCCCCCcchhhHHHHHHHHHhCCCEEEEECCCCCCCCcH---------------------------------
Confidence 45789999999999887 98 88899965 89999999999987631
Q ss_pred cccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCC---CccceEEEeccC
Q 013006 235 LAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNP---HLVKGVTLLNAT 290 (451)
Q Consensus 235 ~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P---~~v~~lvl~~~~ 290 (451)
..+.+++++.+..+++..+.++++||||||||.+++.++..+| ++|+++|++++.
T Consensus 77 -~~~~~~l~~~i~~~~~~~g~~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~ 134 (317)
T 1tca_A 77 -QVNTEYMVNAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPD 134 (317)
T ss_dssp -HHHHHHHHHHHHHHHHHTTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCC
T ss_pred -HHHHHHHHHHHHHHHHHhCCCCEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCC
Confidence 0345677788888888888899999999999999999998876 799999999974
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.74 E-value=2.9e-17 Score=154.07 Aligned_cols=132 Identities=17% Similarity=0.208 Sum_probs=87.3
Q ss_pred cCCeEEEEeecCCCC---CCCCcEEEecCCCCChhcHHHH---HHhh-cCCceEEEEcC--CCCCCCCCCCCCCCCCCCC
Q 013006 142 KPKFNVHYEKAGCEN---VNSPPVLFLPGFGVGSFHYEKQ---LKDL-GKDYRAWAIDF--LGQGMSLPDEDPTPRSKEG 212 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~---~~~p~VlllHG~~~~~~~~~~~---~~~L-~~~~~Vi~~D~--rG~G~S~~~~~~~~~~~~~ 212 (451)
..|..+.+..+-|.+ .+.|+||++||++.+...|... ...+ ..++.|+++|. ||+|.+...
T Consensus 25 ~~~~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rG~~~~~~~---------- 94 (282)
T 3fcx_A 25 ELNCKMKFAVYLPPKAETGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGED---------- 94 (282)
T ss_dssp TTTEEEEEEEEECGGGGTSCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEEECSCSSCCCC--------------
T ss_pred hcCCeeEEEEEcCCCCCCCCCCEEEEEcCCCCCccchhhcchHHHHhhcCCeEEEEeccccCcccccccc----------
Confidence 456777776665432 3458999999999998888766 4555 45899999999 776654321
Q ss_pred CchhhhhccccCCCCCCccccc-------cccCHHHHHHHHHHHHH-HhCC--CCEEEEEeCcchHHHHHHHHhCCCccc
Q 013006 213 DSTEEKNFLWGFGDKAQPWASE-------LAYSVDLWQDQVCYFIK-EVIR--EPVYVVGNSLGGFVAVYFAACNPHLVK 282 (451)
Q Consensus 213 ~~~~~~~~~w~~~~~~~~~~~~-------~~~s~~~~a~dv~~ll~-~l~~--~~v~lvGhS~GG~val~~A~~~P~~v~ 282 (451)
..|.++.....+... .....+..++++..+++ .+++ ++++|+||||||.+|+.+|.++|++++
T Consensus 95 -------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~ 167 (282)
T 3fcx_A 95 -------ESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYK 167 (282)
T ss_dssp -----------CCCCCCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHHTSTTTSS
T ss_pred -------ccccccCCcccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHHhCcccce
Confidence 112221111111000 00123445557777776 4444 689999999999999999999999999
Q ss_pred eEEEeccC
Q 013006 283 GVTLLNAT 290 (451)
Q Consensus 283 ~lvl~~~~ 290 (451)
+++++++.
T Consensus 168 ~~v~~s~~ 175 (282)
T 3fcx_A 168 SVSAFAPI 175 (282)
T ss_dssp CEEEESCC
T ss_pred EEEEeCCc
Confidence 99999985
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.74 E-value=2.1e-17 Score=154.92 Aligned_cols=134 Identities=19% Similarity=0.262 Sum_probs=94.6
Q ss_pred ecCCeEEEEeecCCCC---CCCCcEEEecCCCCChhcHHHH---HHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013006 141 WKPKFNVHYEKAGCEN---VNSPPVLFLPGFGVGSFHYEKQ---LKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGD 213 (451)
Q Consensus 141 ~~~g~~l~y~~~g~~~---~~~p~VlllHG~~~~~~~~~~~---~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~ 213 (451)
...|.++.+..+-|.+ .+.|+||++||++.+...|... ...+.+ ++.|+++|.||+|.|.....
T Consensus 23 ~~~g~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~g~G~s~~~~~--------- 93 (278)
T 3e4d_A 23 ETLKSEMTFAVYVPPKAIHEPCPVVWYLSGLTCTHANVMEKGEYRRMASELGLVVVCPDTSPRGNDVPDEL--------- 93 (278)
T ss_dssp TTTTEEEEEEEEECGGGGTSCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCT---------
T ss_pred cccCCcceEEEEcCCCCCCCCCCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEecCCcccCccccccc---------
Confidence 3467777777666542 3458999999999999888773 334444 89999999999999864321
Q ss_pred chhhhhccccCCCC--------CCccccccccC-HHHHHHHHHHHHHHh-CC--CCEEEEEeCcchHHHHHHHHhCCCcc
Q 013006 214 STEEKNFLWGFGDK--------AQPWASELAYS-VDLWQDQVCYFIKEV-IR--EPVYVVGNSLGGFVAVYFAACNPHLV 281 (451)
Q Consensus 214 ~~~~~~~~w~~~~~--------~~~~~~~~~~s-~~~~a~dv~~ll~~l-~~--~~v~lvGhS~GG~val~~A~~~P~~v 281 (451)
..|.++.. ..++.. .+. .+.+++++..++++. ++ ++++|+||||||.+++.+|.++|+++
T Consensus 94 ------~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~ 165 (278)
T 3e4d_A 94 ------TNWQMGKGAGFYLDATEEPWSE--HYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKNPERF 165 (278)
T ss_dssp ------TCTTSBTTBCTTSBCCSTTTTT--TCBHHHHHHTHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTC
T ss_pred ------ccccccCCccccccCCcCcccc--hhhHHHHHHHHHHHHHHhhcCCCcCCeEEEEEChHHHHHHHHHHhCCccc
Confidence 11211110 001111 123 344456787877765 66 78999999999999999999999999
Q ss_pred ceEEEeccCC
Q 013006 282 KGVTLLNATP 291 (451)
Q Consensus 282 ~~lvl~~~~~ 291 (451)
++++++++..
T Consensus 166 ~~~v~~~~~~ 175 (278)
T 3e4d_A 166 KSCSAFAPIV 175 (278)
T ss_dssp SCEEEESCCS
T ss_pred ceEEEeCCcc
Confidence 9999999853
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.74 E-value=5.5e-17 Score=156.12 Aligned_cols=112 Identities=15% Similarity=0.111 Sum_probs=89.8
Q ss_pred CCeEEEEeecCCCCCCCCc-EEEecCCC---CChhcHHHHHHhhcC--CceEEEEcCCCCCCCCCCCCCCCCCCCCCchh
Q 013006 143 PKFNVHYEKAGCENVNSPP-VLFLPGFG---VGSFHYEKQLKDLGK--DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTE 216 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~-VlllHG~~---~~~~~~~~~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~ 216 (451)
+|+++ |...+. ...++ ||++||.+ ++...|..++..|++ +|.|+++|+|+++.+..+
T Consensus 66 ~g~~~-~~p~~~--~~~~~~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~-------------- 128 (322)
T 3k6k_A 66 GGVPC-IRQATD--GAGAAHILYFHGGGYISGSPSTHLVLTTQLAKQSSATLWSLDYRLAPENPFP-------------- 128 (322)
T ss_dssp TTEEE-EEEECT--TCCSCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTCEEEEECCCCTTTSCTT--------------
T ss_pred CCEeE-EecCCC--CCCCeEEEEEcCCcccCCChHHHHHHHHHHHHhcCCEEEEeeCCCCCCCCCc--------------
Confidence 78888 665553 24567 99999966 778889999998864 899999999998765311
Q ss_pred hhhccccCCCCCCccccccccCHHHHHHHHHHHHHH-hCCCCEEEEEeCcchHHHHHHHHhCCCc----cceEEEeccCC
Q 013006 217 EKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKE-VIREPVYVVGNSLGGFVAVYFAACNPHL----VKGVTLLNATP 291 (451)
Q Consensus 217 ~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~-l~~~~v~lvGhS~GG~val~~A~~~P~~----v~~lvl~~~~~ 291 (451)
..+++..+.+..+++. ++.++++|+|||+||.+++.+|.++|++ ++++|++++..
T Consensus 129 --------------------~~~~d~~~a~~~l~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~ 188 (322)
T 3k6k_A 129 --------------------AAVDDCVAAYRALLKTAGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFV 188 (322)
T ss_dssp --------------------HHHHHHHHHHHHHHHHHSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCC
T ss_pred --------------------hHHHHHHHHHHHHHHcCCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCc
Confidence 3567777777777776 5568999999999999999999998776 99999999853
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=99.74 E-value=2.8e-17 Score=157.92 Aligned_cols=203 Identities=13% Similarity=0.107 Sum_probs=133.7
Q ss_pred cEEEecC--CCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCC-CCCCCCCCCCchhhhhccccCCCCCCcccccccc
Q 013006 161 PVLFLPG--FGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDE-DPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAY 237 (451)
Q Consensus 161 ~VlllHG--~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~-~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 237 (451)
+|+|+|| ++++...|..++..|..+++|+++|+||+|.+.... .+ ..+
T Consensus 91 ~l~~~hg~g~~~~~~~~~~l~~~L~~~~~v~~~d~~G~g~~~~~~~~~-----------------------------~~~ 141 (319)
T 2hfk_A 91 VLVGCTGTAANGGPHEFLRLSTSFQEERDFLAVPLPGYGTGTGTGTAL-----------------------------LPA 141 (319)
T ss_dssp EEEEECCCCTTCSTTTTHHHHHTTTTTCCEEEECCTTCCBC---CBCC-----------------------------EES
T ss_pred cEEEeCCCCCCCcHHHHHHHHHhcCCCCceEEecCCCCCCCcccccCC-----------------------------CCC
Confidence 9999998 678888999999999989999999999999972100 00 026
Q ss_pred CHHHHHHHHHHHHHHh-CCCCEEEEEeCcchHHHHHHHHhC----CCccceEEEeccCCCCCCCCCCCCchHHhhhcCCC
Q 013006 238 SVDLWQDQVCYFIKEV-IREPVYVVGNSLGGFVAVYFAACN----PHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWS 312 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l-~~~~v~lvGhS~GG~val~~A~~~----P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (451)
+++++++++.+.++.+ ...+++|+||||||.+|+.+|.++ +++|++++++++.+... ......
T Consensus 142 ~~~~~a~~~~~~i~~~~~~~p~~l~G~S~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~~-------~~~~~~----- 209 (319)
T 2hfk_A 142 DLDTALDAQARAILRAAGDAPVVLLGHAGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGH-------QEPIEV----- 209 (319)
T ss_dssp SHHHHHHHHHHHHHHHHTTSCEEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTS-------CHHHHH-----
T ss_pred CHHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCCc-------hhHHHH-----
Confidence 9999999999999887 468999999999999999999987 45799999999854210 000000
Q ss_pred CCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhh
Q 013006 313 GTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSR 392 (451)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (451)
....+. ...+...+. ......+... ..+...+. ...
T Consensus 210 -------~~~~l~-------------~~~~~~~~~---~~~~~~~~~~----------~~~~~~~~-----------~~~ 245 (319)
T 2hfk_A 210 -------WSRQLG-------------EGLFAGELE---PMSDARLLAM----------GRYARFLA-----------GPR 245 (319)
T ss_dssp -------THHHHH-------------HHHHHTCSS---CCCHHHHHHH----------HHHHHHHH-----------SCC
T ss_pred -------HHHHhh-------------HHHHHhhcc---ccchHHHHHH----------HHHHHHHH-----------hCC
Confidence 000000 001110000 0000100000 00101100 012
Q ss_pred ccCCCCCEEEEeeCCCCCCChHH-HHHHHHHCC-CCcEEEeCCCCCCccc-cChHHHHhhh
Q 013006 393 CQMNGVPICLIYGKEDPWVKPVW-GLQVKRQVP-EAPYYEISPAGHCPHD-EVPEVCSLCL 450 (451)
Q Consensus 393 l~~i~~PvLii~G~~D~~v~~~~-~~~l~~~lp-~~~~~~i~~~gH~~~~-e~p~~v~~~I 450 (451)
...+++|+++++| +|.++++.. ...+.+..+ +.+++.++ +||+.++ ++|+++++.|
T Consensus 246 ~~~i~~Pvl~i~g-~D~~~~~~~~~~~~~~~~~~~~~~~~v~-g~H~~~~~e~~~~~~~~i 304 (319)
T 2hfk_A 246 PGRSSAPVLLVRA-SEPLGDWQEERGDWRAHWDLPHTVADVP-GDHFTMMRDHAPAVAEAV 304 (319)
T ss_dssp CCCCCSCEEEEEE-SSCSSCCCGGGCCCSCCCSSCSEEEEES-SCTTHHHHTCHHHHHHHH
T ss_pred CCCcCCCEEEEEc-CCCCCCccccccchhhcCCCCCEEEEeC-CCcHHHHHHhHHHHHHHH
Confidence 3568999999999 999988765 445555555 47889998 6999755 8999998876
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.74 E-value=1.1e-17 Score=159.83 Aligned_cols=124 Identities=12% Similarity=0.066 Sum_probs=90.7
Q ss_pred CCccceeeecCCeEEEEeecCCCC--CCCCcEEEecC---CCCChhcHHHHHHhhcC--CceEEEEcCCCCCCCCCCCCC
Q 013006 133 PITSCFWEWKPKFNVHYEKAGCEN--VNSPPVLFLPG---FGVGSFHYEKQLKDLGK--DYRAWAIDFLGQGMSLPDEDP 205 (451)
Q Consensus 133 ~~~~~~~~~~~g~~l~y~~~g~~~--~~~p~VlllHG---~~~~~~~~~~~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~ 205 (451)
.+....+...+| ++.+..+.+.+ .+.|+||++|| ++++...|..++..|++ ++.|+++|+||+|.+..+
T Consensus 47 ~~~~~~i~~~~g-~l~~~~~~P~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~~~~~~~--- 122 (310)
T 2hm7_A 47 EVREFDMDLPGR-TLKVRMYRPEGVEPPYPALVYYHGGSWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHKFP--- 122 (310)
T ss_dssp EEEEEEEEETTE-EEEEEEEECTTCCSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCTT---
T ss_pred eEEEEEeccCCC-eEEEEEEecCCCCCCCCEEEEECCCccccCChhHhHHHHHHHHHhcCCEEEEeCCCCCCCCCCC---
Confidence 344555566666 77777665543 34689999999 77888999999999964 799999999999886421
Q ss_pred CCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHH---hC--CCCEEEEEeCcchHHHHHHHHhCCC-
Q 013006 206 TPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKE---VI--REPVYVVGNSLGGFVAVYFAACNPH- 279 (451)
Q Consensus 206 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~---l~--~~~v~lvGhS~GG~val~~A~~~P~- 279 (451)
...++..+.+..+.+. ++ .++++|+||||||.+++.+|.++|+
T Consensus 123 -------------------------------~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~ 171 (310)
T 2hm7_A 123 -------------------------------AAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKER 171 (310)
T ss_dssp -------------------------------HHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHT
T ss_pred -------------------------------ccHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhc
Confidence 1223333333333322 22 3689999999999999999998876
Q ss_pred ---ccceEEEeccCC
Q 013006 280 ---LVKGVTLLNATP 291 (451)
Q Consensus 280 ---~v~~lvl~~~~~ 291 (451)
+++++|++++..
T Consensus 172 ~~~~v~~~vl~~p~~ 186 (310)
T 2hm7_A 172 GGPALAFQLLIYPST 186 (310)
T ss_dssp TCCCCCCEEEESCCC
T ss_pred CCCCceEEEEEcCCc
Confidence 699999999864
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.73 E-value=1.4e-16 Score=148.36 Aligned_cols=196 Identities=15% Similarity=-0.014 Sum_probs=113.6
Q ss_pred eeeecCCeEEEEeecCCCC-CCCCcEEEecCCCCCh--hcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013006 138 FWEWKPKFNVHYEKAGCEN-VNSPPVLFLPGFGVGS--FHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGD 213 (451)
Q Consensus 138 ~~~~~~g~~l~y~~~g~~~-~~~p~VlllHG~~~~~--~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~ 213 (451)
+....||.+|....+-|.. ...|.||++||++.+. ..+..+++.|+ +||.|+++|+||||.|.........
T Consensus 34 ~~~~~dG~~i~g~l~~P~~~~~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~~~~~----- 108 (259)
T 4ao6_A 34 FSLEVDGRTVPGVYWSPAEGSSDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPGHGERASVQAGREP----- 108 (259)
T ss_dssp EEEEETTEEEEEEEEEESSSCCSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCCC------------------
T ss_pred EEEeeCCeEEEEEEEeCCCCCCCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccCCCCCCCCccccccc-----
Confidence 3334699999988776543 2356788889998874 34667788884 5899999999999998643221100
Q ss_pred chhhhhccccCCCCCCccccccccCHHHHHHHHHHHH----HHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEecc
Q 013006 214 STEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFI----KEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNA 289 (451)
Q Consensus 214 ~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll----~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~ 289 (451)
.+..+ . .. ................|....+ .....+++.++|+|+||.+++.+|+..| ++++.++..+
T Consensus 109 ----~~~~~-~-~~-~~~~~~~~~~~~~~~~d~~a~l~~l~~~~d~~rv~~~G~S~GG~~a~~~a~~~p-ri~Aav~~~~ 180 (259)
T 4ao6_A 109 ----TDVVG-L-DA-FPRMWHEGGGTAAVIADWAAALDFIEAEEGPRPTGWWGLSMGTMMGLPVTASDK-RIKVALLGLM 180 (259)
T ss_dssp ----CCGGG-S-TT-HHHHHHHTTHHHHHHHHHHHHHHHHHHHHCCCCEEEEECTHHHHHHHHHHHHCT-TEEEEEEESC
T ss_pred ----chhhh-h-hh-hhhhhhhhhhHHHHHHHHHHHHHHhhhccCCceEEEEeechhHHHHHHHHhcCC-ceEEEEEecc
Confidence 00000 0 00 0000000012222333333333 3446789999999999999999999998 4666665543
Q ss_pred CCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhH
Q 013006 290 TPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAA 369 (451)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (451)
... . . .
T Consensus 181 ~~~----------------------~-~-~-------------------------------------------------- 186 (259)
T 4ao6_A 181 GVE----------------------G-V-N-------------------------------------------------- 186 (259)
T ss_dssp CTT----------------------S-T-T--------------------------------------------------
T ss_pred ccc----------------------c-c-c--------------------------------------------------
Confidence 210 0 0 0
Q ss_pred HHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC--CcEEEeCCCCCC
Q 013006 370 AASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE--APYYEISPAGHC 437 (451)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~--~~~~~i~~~gH~ 437 (451)
..+......++++|+|+++|++|.++|++.++++.+.++. ..++++++ +|.
T Consensus 187 ----------------~~~~~~~a~~i~~P~Li~hG~~D~~vp~~~~~~l~~al~~~~k~l~~~~G-~H~ 239 (259)
T 4ao6_A 187 ----------------GEDLVRLAPQVTCPVRYLLQWDDELVSLQSGLELFGKLGTKQKTLHVNPG-KHS 239 (259)
T ss_dssp ----------------HHHHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCCSSEEEEEESS-CTT
T ss_pred ----------------ccchhhhhccCCCCEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEeCC-CCC
Confidence 0011222356899999999999999999999999999865 45777775 675
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.72 E-value=7.5e-18 Score=179.54 Aligned_cols=222 Identities=14% Similarity=0.053 Sum_probs=138.9
Q ss_pred ceeeecCCeEEEEeecCCCC----CCCCcEEEecCCCCChh---cHH-HHHHhh--cCCceEEEEcCCCCCCCCCCCCCC
Q 013006 137 CFWEWKPKFNVHYEKAGCEN----VNSPPVLFLPGFGVGSF---HYE-KQLKDL--GKDYRAWAIDFLGQGMSLPDEDPT 206 (451)
Q Consensus 137 ~~~~~~~g~~l~y~~~g~~~----~~~p~VlllHG~~~~~~---~~~-~~~~~L--~~~~~Vi~~D~rG~G~S~~~~~~~ 206 (451)
..+...+ .+|++..+.|.+ ...|+||++||++.+.. .|. .+...| .++|.|+++|+||+|.+......
T Consensus 471 ~~~~~~~-~~l~~~~~~P~~~~~~~~~p~vl~~hG~~~~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~~~~~~~- 548 (719)
T 1z68_A 471 KKLEVDE-ITLWYKMILPPQFDRSKKYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIALVDGRGTAFQGDKLLY- 548 (719)
T ss_dssp EEEEETT-EEEEEEEEECTTCCSSSCEEEEEEECCCTTBCCCCCCCCCCHHHHHHHTTCCEEEEEECTTBSSSCHHHHG-
T ss_pred EEEecCC-eEEEEEEEeCCCCCCCCCccEEEEECCCCCcCcccccchhhHHHHHHhcCCeEEEEEcCCCCCCCchhhHH-
Confidence 3344455 899988876643 23478999999987643 342 234444 46899999999999998521000
Q ss_pred CCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHH--hCCCCEEEEEeCcchHHHHHHHHhCCCccceE
Q 013006 207 PRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKE--VIREPVYVVGNSLGGFVAVYFAACNPHLVKGV 284 (451)
Q Consensus 207 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~--l~~~~v~lvGhS~GG~val~~A~~~P~~v~~l 284 (451)
.....| ....++++.+.+..+++. ++.++++|+||||||++++.+|.++|++++++
T Consensus 549 ----------~~~~~~------------~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~ 606 (719)
T 1z68_A 549 ----------AVYRKL------------GVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCG 606 (719)
T ss_dssp ----------GGTTCT------------THHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTTSSSCCSEE
T ss_pred ----------HHhhcc------------CcccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHHhCCCceEEE
Confidence 000000 012445555555555542 12368999999999999999999999999999
Q ss_pred EEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCC-CChHHHHHHHHhh
Q 013006 285 TLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHA-TNVDTVFTRILET 363 (451)
Q Consensus 285 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 363 (451)
|++++...+... ... + ....+.... ......+. .
T Consensus 607 v~~~~~~~~~~~---------------------~~~---~-----------------~~~~~g~~~~~~~~~~~~---~- 641 (719)
T 1z68_A 607 IAVAPVSSWEYY---------------------ASV---Y-----------------TERFMGLPTKDDNLEHYK---N- 641 (719)
T ss_dssp EEESCCCCTTTS---------------------BHH---H-----------------HHHHHCCSSTTTTHHHHH---H-
T ss_pred EEcCCccChHHh---------------------ccc---c-----------------chhhcCCcccccchhhhh---h-
Confidence 999986421100 000 0 000011000 00000000 0
Q ss_pred ccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCC-CEEEEeeCCCCCCChHHHHHHHHHCCC----CcEEEeCCCCCCc
Q 013006 364 TQHPAAAASFASIMFAPQGNLSFREALSRCQMNGV-PICLIYGKEDPWVKPVWGLQVKRQVPE----APYYEISPAGHCP 438 (451)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-PvLii~G~~D~~v~~~~~~~l~~~lp~----~~~~~i~~~gH~~ 438 (451)
......+.++++ |+|+++|++|..++++.++++.+.+++ .++++++++||.+
T Consensus 642 -----------------------~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~ 698 (719)
T 1z68_A 642 -----------------------STVMARAEYFRNVDYLLIHGTADDNVHFQNSAQIAKALVNAQVDFQAMWYSDQNHGL 698 (719)
T ss_dssp -----------------------TCSGGGGGGGTTSEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTC
T ss_pred -----------------------CCHhHHHhcCCCCcEEEEEeCCCCCcCHHHHHHHHHHHHHCCCceEEEEECcCCCCC
Confidence 011223445677 899999999999999988888776643 4699999999999
Q ss_pred cccChHHHHhhh
Q 013006 439 HDEVPEVCSLCL 450 (451)
Q Consensus 439 ~~e~p~~v~~~I 450 (451)
..++++++.+.|
T Consensus 699 ~~~~~~~~~~~i 710 (719)
T 1z68_A 699 SGLSTNHLYTHM 710 (719)
T ss_dssp CTHHHHHHHHHH
T ss_pred CcccHHHHHHHH
Confidence 777788777655
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.72 E-value=3.4e-17 Score=150.57 Aligned_cols=198 Identities=17% Similarity=0.081 Sum_probs=118.7
Q ss_pred CCCcEEEecCCCCChhcHHH----HHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCC---chhhh-hccccCCCCC
Q 013006 158 NSPPVLFLPGFGVGSFHYEK----QLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGD---STEEK-NFLWGFGDKA 228 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~----~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~---~~~~~-~~~w~~~~~~ 228 (451)
..|+|||+||++++...|.. +.+.|.+ +|+|+++|+|+++........ ...+.. ...+. ..+|.....
T Consensus 4 ~~~~vl~lHG~g~~~~~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~--~~~~~~~~~~g~g~~~~w~~~~~~- 80 (243)
T 1ycd_A 4 QIPKLLFLHGFLQNGKVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFE--MDDEKWQATLDADVNRAWFYHSEI- 80 (243)
T ss_dssp CCCEEEEECCTTCCHHHHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSC--CCHHHHHHHHHTTCCEESSCCCSS-
T ss_pred cCceEEEeCCCCccHHHHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccc--cccccccccCCCCCCcccccCCCC-
Confidence 46899999999999998874 5556655 899999999954322100000 000000 00000 011110000
Q ss_pred CccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCC------CccceEEEeccCCCCCCCCCCCCc
Q 013006 229 QPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNP------HLVKGVTLLNATPFWGFSPNPIRS 302 (451)
Q Consensus 229 ~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P------~~v~~lvl~~~~~~~~~~~~~~~~ 302 (451)
....++++.++.+...++..+ ++++|+||||||.+|+.+|.+++ ..++.++++++.... .
T Consensus 81 -----~~~~d~~~~~~~l~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~--------~ 146 (243)
T 1ycd_A 81 -----SHELDISEGLKSVVDHIKANG-PYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFT--------E 146 (243)
T ss_dssp -----GGGCCCHHHHHHHHHHHHHHC-CCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCE--------E
T ss_pred -----cchhhHHHHHHHHHHHHHhcC-CeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCC--------C
Confidence 012467778888877776654 67999999999999999998753 246777777653210 0
Q ss_pred hHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCC
Q 013006 303 PKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQG 382 (451)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (451)
+. .... .. . . . ...
T Consensus 147 ~~----~~~~---------------------~~----------~-----~-----------~-~~~-------------- 160 (243)
T 1ycd_A 147 PD----PEHP---------------------GE----------L-----R-----------I-TEK-------------- 160 (243)
T ss_dssp EC----TTST---------------------TC----------E-----E-----------E-CGG--------------
T ss_pred cc----cccc---------------------cc----------c-----c-----------c-chh--------------
Confidence 00 0000 00 0 0 0 000
Q ss_pred CCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCC-------cEEEeCCCCCCcccc
Q 013006 383 NLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEA-------PYYEISPAGHCPHDE 441 (451)
Q Consensus 383 ~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~-------~~~~i~~~gH~~~~e 441 (451)
+.+....+.++++|+|+++|++|.++|++.++++.+.+++. ...+++++||++..+
T Consensus 161 ---~~~~~~~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~g~~~~~~~~~~~~~gH~~~~~ 223 (243)
T 1ycd_A 161 ---FRDSFAVKPDMKTKMIFIYGASDQAVPSVRSKYLYDIYLKAQNGNKEKVLAYEHPGGHMVPNK 223 (243)
T ss_dssp ---GTTTTCCCTTCCCEEEEEEETTCSSSCHHHHHHHHHHHHHHTTTCTTTEEEEEESSSSSCCCC
T ss_pred ---HHHhccCcccCCCCEEEEEeCCCCccCHHHHHHHHHHhhhhccccccccEEEecCCCCcCCch
Confidence 00001123567999999999999999999999888877653 566777899998765
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=6e-17 Score=149.47 Aligned_cols=189 Identities=12% Similarity=0.065 Sum_probs=123.9
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAY 237 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 237 (451)
.+++|||+||++++...|..++..|..+++|+++|+||++.
T Consensus 21 ~~~~l~~~hg~~~~~~~~~~~~~~l~~~~~v~~~d~~g~~~--------------------------------------- 61 (244)
T 2cb9_A 21 GGKNLFCFPPISGFGIYFKDLALQLNHKAAVYGFHFIEEDS--------------------------------------- 61 (244)
T ss_dssp CSSEEEEECCTTCCGGGGHHHHHHTTTTSEEEEECCCCSTT---------------------------------------
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHhCCCceEEEEcCCCHHH---------------------------------------
Confidence 45799999999999999999999998889999999998631
Q ss_pred CHHHHHHHHHHHHHHhC-CCCEEEEEeCcchHHHHHHHHhC---CCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCC
Q 013006 238 SVDLWQDQVCYFIKEVI-REPVYVVGNSLGGFVAVYFAACN---PHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSG 313 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l~-~~~v~lvGhS~GG~val~~A~~~---P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (451)
+++++.++++.+. .++++++||||||.+|+.+|.++ ++++++++++++.+.... +..
T Consensus 62 ----~~~~~~~~i~~~~~~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~lvl~~~~~~~~~---------------~~~ 122 (244)
T 2cb9_A 62 ----RIEQYVSRITEIQPEGPYVLLGYSAGGNLAFEVVQAMEQKGLEVSDFIIVDAYKKDQS---------------ITA 122 (244)
T ss_dssp ----HHHHHHHHHHHHCSSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCCCSC---------------CCC
T ss_pred ----HHHHHHHHHHHhCCCCCEEEEEECHhHHHHHHHHHHHHHcCCCccEEEEEcCCCCccc---------------ccc
Confidence 2456666677775 57899999999999999999876 578999999998642100 000
Q ss_pred CCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhc
Q 013006 314 TFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRC 393 (451)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 393 (451)
...... ......+. +.. .+.. ....+..+. ......
T Consensus 123 -~~~~~~--------~~~~~~~~-~~~------------------~~~~------~~~~~~~~~----------~~~~~~ 158 (244)
T 2cb9_A 123 -DTENDD--------SAAYLPEA-VRE------------------TVMQ------KKRCYQEYW----------AQLINE 158 (244)
T ss_dssp -C---------------CCSCHH-HHH------------------HHTH------HHHHHHHHH----------HHCCCC
T ss_pred -cccHHH--------HHHHhHHH-HHH------------------HHHH------HHHHHHHHH----------HhhccC
Confidence 000000 00000000 000 0000 000000110 001134
Q ss_pred cCCCCCEEEEeeC--CCCCCChHHHHHHHHHCC-CCcEEEeCCCCC--CccccChHHHHhhh
Q 013006 394 QMNGVPICLIYGK--EDPWVKPVWGLQVKRQVP-EAPYYEISPAGH--CPHDEVPEVCSLCL 450 (451)
Q Consensus 394 ~~i~~PvLii~G~--~D~~v~~~~~~~l~~~lp-~~~~~~i~~~gH--~~~~e~p~~v~~~I 450 (451)
..+++|+++++|+ +|. +++.....+.+..+ +.++.++++ || ++..++|+++++.|
T Consensus 159 ~~i~~Pvl~i~g~~~~D~-~~~~~~~~w~~~~~~~~~~~~i~g-gH~~~~~~~~~~~~~~~i 218 (244)
T 2cb9_A 159 GRIKSNIHFIEAGIQTET-SGAMVLQKWQDAAEEGYAEYTGYG-AHKDMLEGEFAEKNANII 218 (244)
T ss_dssp SCBSSEEEEEECSBCSCC-CHHHHTTSSGGGBSSCEEEEECSS-BGGGTTSHHHHHHHHHHH
T ss_pred CCcCCCEEEEEccCcccc-ccccchhHHHHhcCCCCEEEEecC-ChHHHcChHHHHHHHHHH
Confidence 5689999999999 887 44554455566655 578999985 99 77778899988765
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.71 E-value=1e-16 Score=154.40 Aligned_cols=121 Identities=15% Similarity=0.115 Sum_probs=89.5
Q ss_pred ccceeeecCCeEEEEeecCCCCCCCCcEEEecCCC---CChhcHHHHHHhhcC--CceEEEEcCCCCCCCCCCCCCCCCC
Q 013006 135 TSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFG---VGSFHYEKQLKDLGK--DYRAWAIDFLGQGMSLPDEDPTPRS 209 (451)
Q Consensus 135 ~~~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~---~~~~~~~~~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~~~~~ 209 (451)
....+...+| +|....+.+.+...|+||++||.+ ++...|..++..|++ ++.|+++|+|+.+....+
T Consensus 64 ~~~~~~~~~g-~i~~~~~~p~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~V~~~dyr~~p~~~~~------- 135 (326)
T 3ga7_A 64 RTCAVPTPYG-DVTTRLYSPQPTSQATLYYLHGGGFILGNLDTHDRIMRLLARYTGCTVIGIDYSLSPQARYP------- 135 (326)
T ss_dssp EEEEECCTTS-CEEEEEEESSSSCSCEEEEECCSTTTSCCTTTTHHHHHHHHHHHCSEEEEECCCCTTTSCTT-------
T ss_pred EEEEeecCCC-CeEEEEEeCCCCCCcEEEEECCCCcccCChhhhHHHHHHHHHHcCCEEEEeeCCCCCCCCCC-------
Confidence 3344445566 677776666544569999999988 888899999999976 899999999987654211
Q ss_pred CCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHH---hCC--CCEEEEEeCcchHHHHHHHHhCCCc----
Q 013006 210 KEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKE---VIR--EPVYVVGNSLGGFVAVYFAACNPHL---- 280 (451)
Q Consensus 210 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~---l~~--~~v~lvGhS~GG~val~~A~~~P~~---- 280 (451)
..+++..+.+..+.+. +++ ++++|+|||+||.+++.+|.++|++
T Consensus 136 ---------------------------~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~ 188 (326)
T 3ga7_A 136 ---------------------------QAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRC 188 (326)
T ss_dssp ---------------------------HHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCS
T ss_pred ---------------------------cHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCc
Confidence 2344444444444443 233 6899999999999999999988764
Q ss_pred --cceEEEeccC
Q 013006 281 --VKGVTLLNAT 290 (451)
Q Consensus 281 --v~~lvl~~~~ 290 (451)
+++++++.+.
T Consensus 189 ~~~~~~vl~~~~ 200 (326)
T 3ga7_A 189 GNVIAILLWYGL 200 (326)
T ss_dssp SEEEEEEEESCC
T ss_pred cCceEEEEeccc
Confidence 8999998874
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=99.71 E-value=1.2e-17 Score=157.33 Aligned_cols=103 Identities=16% Similarity=0.197 Sum_probs=81.9
Q ss_pred CCCcEEEecCCCCCh---hcHHHHHHhhcC---CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcc
Q 013006 158 NSPPVLFLPGFGVGS---FHYEKQLKDLGK---DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPW 231 (451)
Q Consensus 158 ~~p~VlllHG~~~~~---~~~~~~~~~L~~---~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 231 (451)
..+||||+||++++. ..|..+.+.|++ +++|+++|+ |||.|..... . |
T Consensus 4 ~~~pvVllHG~~~~~~~~~~~~~~~~~L~~~~~g~~v~~~d~-G~g~s~~~~~---------------~-~--------- 57 (279)
T 1ei9_A 4 APLPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEI-GKTLREDVEN---------------S-F--------- 57 (279)
T ss_dssp SSCCEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCC-SSSHHHHHHH---------------H-H---------
T ss_pred CCCcEEEECCCCCCCCCcccHHHHHHHHHHHCCCcEEEEEEe-CCCCcccccc---------------c-c---------
Confidence 357899999999887 889999999965 569999998 9998741100 0 0
Q ss_pred ccccccCHHHHHHHHHHHHHHhC-C-CCEEEEEeCcchHHHHHHHHhCCCc-cceEEEeccC
Q 013006 232 ASELAYSVDLWQDQVCYFIKEVI-R-EPVYVVGNSLGGFVAVYFAACNPHL-VKGVTLLNAT 290 (451)
Q Consensus 232 ~~~~~~s~~~~a~dv~~ll~~l~-~-~~v~lvGhS~GG~val~~A~~~P~~-v~~lvl~~~~ 290 (451)
..++.+.++++.+.++.+. . +++++|||||||.++..+|.++|++ |+++|++++.
T Consensus 58 ----~~~~~~~~~~~~~~l~~~~~l~~~~~lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~p 115 (279)
T 1ei9_A 58 ----FLNVNSQVTTVCQILAKDPKLQQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQ 115 (279)
T ss_dssp ----HSCHHHHHHHHHHHHHSCGGGTTCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCC
T ss_pred ----ccCHHHHHHHHHHHHHhhhhccCCEEEEEECHHHHHHHHHHHHcCCcccceEEEecCc
Confidence 1367777777777776532 2 7899999999999999999999984 9999999864
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.71 E-value=3.2e-16 Score=147.03 Aligned_cols=132 Identities=17% Similarity=0.264 Sum_probs=91.5
Q ss_pred ecCCeEEEEeecCCCC----CCCCcEEEecCCCCChhcHHH---HHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCC
Q 013006 141 WKPKFNVHYEKAGCEN----VNSPPVLFLPGFGVGSFHYEK---QLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEG 212 (451)
Q Consensus 141 ~~~g~~l~y~~~g~~~----~~~p~VlllHG~~~~~~~~~~---~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~ 212 (451)
...|.++.+..+-|.+ ...|+||++||++.+...|.. +...+. .++.|+++|.+++|.+.....
T Consensus 23 ~~~g~~~~~~v~~P~~~~~~~~~P~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~~g~~~~~~~-------- 94 (280)
T 3ls2_A 23 VSTHCTMRFAVFLPPGASESNKVPVLYWLSGLTCTDENFMQKAGAFKKAAELGIAIVAPDTSPRGDNVPNED-------- 94 (280)
T ss_dssp TTTTEEEEEEEEECTTCBTTBCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCS--------
T ss_pred hhcCCceEEEEEcCCCCCCCCCcCEEEEeCCCCCChhhhhcchhHHHHHhhCCeEEEEeCCccccccccccc--------
Confidence 3467778777766542 235899999999998888866 333443 379999999999988754321
Q ss_pred CchhhhhccccCCCCC--------CccccccccC-HHHHHHHHHHHHHHh-CC-CCEEEEEeCcchHHHHHHHHhCCCcc
Q 013006 213 DSTEEKNFLWGFGDKA--------QPWASELAYS-VDLWQDQVCYFIKEV-IR-EPVYVVGNSLGGFVAVYFAACNPHLV 281 (451)
Q Consensus 213 ~~~~~~~~~w~~~~~~--------~~~~~~~~~s-~~~~a~dv~~ll~~l-~~-~~v~lvGhS~GG~val~~A~~~P~~v 281 (451)
.|.++... .++.. .+. .+.+.+++..++++. .. ++++|+||||||.+|+.+|.++|+++
T Consensus 95 --------~~~~g~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~ 164 (280)
T 3ls2_A 95 --------SYDFAQGAGFYVNATQAPYNT--HFNMYDYVVNELPALIEQHFPVTSTKAISGHSMGGHGALMIALKNPQDY 164 (280)
T ss_dssp --------CTTSSTTCCTTCBCCSTTTTT--TCBHHHHHHTHHHHHHHHHSSEEEEEEEEEBTHHHHHHHHHHHHSTTTC
T ss_pred --------ccccccCCccccccccccccc--cccHHHHHHHHHHHHHHhhCCCCCCeEEEEECHHHHHHHHHHHhCchhh
Confidence 12111110 01110 012 344556777777665 23 78999999999999999999999999
Q ss_pred ceEEEeccC
Q 013006 282 KGVTLLNAT 290 (451)
Q Consensus 282 ~~lvl~~~~ 290 (451)
++++++++.
T Consensus 165 ~~~~~~s~~ 173 (280)
T 3ls2_A 165 VSASAFSPI 173 (280)
T ss_dssp SCEEEESCC
T ss_pred eEEEEecCc
Confidence 999999985
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.70 E-value=5.1e-17 Score=173.91 Aligned_cols=219 Identities=12% Similarity=0.042 Sum_probs=136.9
Q ss_pred ecCCeEEEEeecCCCC----CCCCcEEEecCCCCCh---hcHH-HHHHhh-c-CCceEEEEcCCCCCCCCCCCCCCCCCC
Q 013006 141 WKPKFNVHYEKAGCEN----VNSPPVLFLPGFGVGS---FHYE-KQLKDL-G-KDYRAWAIDFLGQGMSLPDEDPTPRSK 210 (451)
Q Consensus 141 ~~~g~~l~y~~~g~~~----~~~p~VlllHG~~~~~---~~~~-~~~~~L-~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~ 210 (451)
..+|.+|++....|.+ .+.|+||++||.+.+. ..|. .+...| + ++|.|+++|+||+|.+...-..
T Consensus 480 ~~dg~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~l~~~~G~~Vv~~D~rG~g~~g~~~~~----- 554 (740)
T 4a5s_A 480 ILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMH----- 554 (740)
T ss_dssp EETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCHHHHG-----
T ss_pred ccCCeEEEEEEEeCCCCCCCCCccEEEEECCCCcccccccccCcCHHHHHHhcCCeEEEEEcCCCCCcCChhHHH-----
Confidence 5689999999887653 2347899999997763 2232 122334 3 6899999999999976421000
Q ss_pred CCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh--CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEec
Q 013006 211 EGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV--IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLN 288 (451)
Q Consensus 211 ~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l--~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~ 288 (451)
.....| ....++++.+.+..+++.- ..+++.|+||||||++++.+|.++|++++++|+++
T Consensus 555 ------~~~~~~------------~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~v~~~ 616 (740)
T 4a5s_A 555 ------AINRRL------------GTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVA 616 (740)
T ss_dssp ------GGTTCT------------TSHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEES
T ss_pred ------HHHhhh------------CcccHHHHHHHHHHHHhcCCcCCccEEEEEECHHHHHHHHHHHhCCCceeEEEEcC
Confidence 000000 0134566666665555321 22689999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcC-CCChHHHHHHHHhhccCh
Q 013006 289 ATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADH-ATNVDTVFTRILETTQHP 367 (451)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 367 (451)
+...+... ... +....+... .......+. .
T Consensus 617 p~~~~~~~---------------------~~~--------------------~~~~~~~~p~~~~~~~~~~---~----- 647 (740)
T 4a5s_A 617 PVSRWEYY---------------------DSV--------------------YTERYMGLPTPEDNLDHYR---N----- 647 (740)
T ss_dssp CCCCGGGS---------------------BHH--------------------HHHHHHCCSSTTTTHHHHH---H-----
T ss_pred CccchHHh---------------------hhH--------------------HHHHHcCCCCccccHHHHH---h-----
Confidence 86421100 000 000001100 000000000 0
Q ss_pred hHHHHHHHHHhcCCCCCchhHHhhhccCCCC-CEEEEeeCCCCCCChHHHHHHHHHCC----CCcEEEeCCCCCCc-ccc
Q 013006 368 AAAASFASIMFAPQGNLSFREALSRCQMNGV-PICLIYGKEDPWVKPVWGLQVKRQVP----EAPYYEISPAGHCP-HDE 441 (451)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-PvLii~G~~D~~v~~~~~~~l~~~lp----~~~~~~i~~~gH~~-~~e 441 (451)
......+.++++ |+|+++|++|..++++.+.++.+.++ ..+++++|++||.+ ..+
T Consensus 648 -------------------~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~H~~~~~~ 708 (740)
T 4a5s_A 648 -------------------STVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASST 708 (740)
T ss_dssp -------------------SCSGGGGGGGGGSEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCSHH
T ss_pred -------------------CCHHHHHhcCCCCcEEEEEcCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCcCCCCc
Confidence 011223345665 99999999999999998888777653 45889999999998 566
Q ss_pred ChHHHHhhh
Q 013006 442 VPEVCSLCL 450 (451)
Q Consensus 442 ~p~~v~~~I 450 (451)
.++++.+.|
T Consensus 709 ~~~~~~~~i 717 (740)
T 4a5s_A 709 AHQHIYTHM 717 (740)
T ss_dssp HHHHHHHHH
T ss_pred cHHHHHHHH
Confidence 677666554
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.3e-16 Score=153.26 Aligned_cols=124 Identities=12% Similarity=0.002 Sum_probs=90.8
Q ss_pred CccceeeecCCeEEEEeecCCCCCCCCcEEEecCCC---CChhcHHHHHHhhc-C-CceEEEEcCCCCCCCCCCCCCCCC
Q 013006 134 ITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFG---VGSFHYEKQLKDLG-K-DYRAWAIDFLGQGMSLPDEDPTPR 208 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~---~~~~~~~~~~~~L~-~-~~~Vi~~D~rG~G~S~~~~~~~~~ 208 (451)
+....+...+|.+|.++.+.+.....|+||++||.+ ++...|..++..|+ + ++.|+++|+|+.+....+
T Consensus 60 ~~~~~i~~~~G~~i~~~~~~P~~~~~p~vv~~HGgG~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~p------ 133 (317)
T 3qh4_A 60 VADDVVTGEAGRPVPVRIYRAAPTPAPVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRLAPEHPYP------ 133 (317)
T ss_dssp EEEEEEECTTSCEEEEEEEECSCSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCTT------
T ss_pred EEEEEecCCCCCeEEEEEEecCCCCCcEEEEECCCcCccCChHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCc------
Confidence 445556667787777776665444578999999877 66778888888886 3 899999999987654211
Q ss_pred CCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHH---HhCC--CCEEEEEeCcchHHHHHHHHhCCC----
Q 013006 209 SKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIK---EVIR--EPVYVVGNSLGGFVAVYFAACNPH---- 279 (451)
Q Consensus 209 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~---~l~~--~~v~lvGhS~GG~val~~A~~~P~---- 279 (451)
..+++..+.+..+.+ .+++ ++++|+|||+||.+++.+|.++++
T Consensus 134 ----------------------------~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~ 185 (317)
T 3qh4_A 134 ----------------------------AALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLP 185 (317)
T ss_dssp ----------------------------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSC
T ss_pred ----------------------------hHHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCC
Confidence 234444444444443 3554 589999999999999999998765
Q ss_pred ccceEEEeccCC
Q 013006 280 LVKGVTLLNATP 291 (451)
Q Consensus 280 ~v~~lvl~~~~~ 291 (451)
.+++++++++..
T Consensus 186 ~~~~~vl~~p~~ 197 (317)
T 3qh4_A 186 PVIFQLLHQPVL 197 (317)
T ss_dssp CCCEEEEESCCC
T ss_pred CeeEEEEECcee
Confidence 499999999864
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.3e-16 Score=170.88 Aligned_cols=222 Identities=12% Similarity=0.041 Sum_probs=131.9
Q ss_pred ccceeeecCCeEEEEeecCCC--CCCCCcEEEecCCCCChh--cHHHHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCC
Q 013006 135 TSCFWEWKPKFNVHYEKAGCE--NVNSPPVLFLPGFGVGSF--HYEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRS 209 (451)
Q Consensus 135 ~~~~~~~~~g~~l~y~~~g~~--~~~~p~VlllHG~~~~~~--~~~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~ 209 (451)
....++..||.+|++....+. +.+.|+||++||.+.... .|......| .+||.|+++|+||+|.+...-..
T Consensus 462 ~~~~~~~~dg~~i~~~~~~p~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~---- 537 (741)
T 1yr2_A 462 EQVFYPSKDGTKVPMFIVRRKDAKGPLPTLLYGYGGFNVALTPWFSAGFMTWIDSGGAFALANLRGGGEYGDAWHD---- 537 (741)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCSCCCEEEECCCCTTCCCCCCCCHHHHHHHTTTCEEEEECCTTSSTTHHHHHH----
T ss_pred EEEEEEcCCCCEEEEEEEecCCCCCCCcEEEEECCCCCccCCCCcCHHHHHHHHCCcEEEEEecCCCCCCCHHHHH----
Confidence 344555678999999877654 235689999999876654 455555555 56899999999999987311000
Q ss_pred CCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh--CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEe
Q 013006 210 KEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV--IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLL 287 (451)
Q Consensus 210 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l--~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~ 287 (451)
.+ .......+++++++.+..+++.- ..+++.++|||+||.+++.++.++|++++++|+.
T Consensus 538 --------------~~-----~~~~~~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~ 598 (741)
T 1yr2_A 538 --------------AG-----RRDKKQNVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPA 598 (741)
T ss_dssp --------------TT-----SGGGTHHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCSEEEEE
T ss_pred --------------hh-----hhhcCCCcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchhheEEEec
Confidence 00 00000134667777776666652 4478999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccCh
Q 013006 288 NATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHP 367 (451)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (451)
.+...+.. . ......... . ..+.. ... .+.+..+..
T Consensus 599 ~~~~d~~~------~----------~~~~~~~~~----------------~-----~~~g~-~~~-~~~~~~~~~----- 634 (741)
T 1yr2_A 599 VGVMDMLR------F----------DQFTAGRYW----------------V-----DDYGY-PEK-EADWRVLRR----- 634 (741)
T ss_dssp SCCCCTTS------G----------GGSTTGGGG----------------H-----HHHCC-TTS-HHHHHHHHT-----
T ss_pred CCcccccc------c----------cCCCCCchh----------------H-----HHcCC-CCC-HHHHHHHHH-----
Confidence 87532110 0 000000000 0 00000 000 111111100
Q ss_pred hHHHHHHHHHhcCCCCCchhHHhhhccC-CCC-CEEEEeeCCCCCCChHHHHHHHHHCCC-------CcEEEeCCCCCCc
Q 013006 368 AAAASFASIMFAPQGNLSFREALSRCQM-NGV-PICLIYGKEDPWVKPVWGLQVKRQVPE-------APYYEISPAGHCP 438 (451)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~-PvLii~G~~D~~v~~~~~~~l~~~lp~-------~~~~~i~~~gH~~ 438 (451)
......+.. +++ |+|+++|++|..+++..+.++.+.+++ +++++++++||..
T Consensus 635 -------------------~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~g~~~~l~~~~~~gH~~ 695 (741)
T 1yr2_A 635 -------------------YSPYHNVRSGVDYPAILVTTADTDDRVVPGHSFKYTAALQTAAIGPKPHLIRIETRAGHGS 695 (741)
T ss_dssp -------------------TCGGGCCCTTSCCCEEEEEECSCCSSSCTHHHHHHHHHHHHSCCCSSCEEEEEC-------
T ss_pred -------------------cCchhhhhccCCCCCEEEEeeCCCCCCChhHHHHHHHHHhhhhcCCCCEEEEEeCCCCcCC
Confidence 011223444 675 999999999999999998888776654 6788999999997
Q ss_pred cccC
Q 013006 439 HDEV 442 (451)
Q Consensus 439 ~~e~ 442 (451)
..+.
T Consensus 696 ~~~~ 699 (741)
T 1yr2_A 696 GKPI 699 (741)
T ss_dssp --CH
T ss_pred CCCH
Confidence 6643
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.5e-16 Score=169.04 Aligned_cols=219 Identities=15% Similarity=0.100 Sum_probs=133.5
Q ss_pred ccceeeecCCeEEEEeecCCCC----CCCCcEEEecCCCCChh--cHHHHHHhh-cCCceEEEEcCCCCCCCCCCCCCCC
Q 013006 135 TSCFWEWKPKFNVHYEKAGCEN----VNSPPVLFLPGFGVGSF--HYEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTP 207 (451)
Q Consensus 135 ~~~~~~~~~g~~l~y~~~g~~~----~~~p~VlllHG~~~~~~--~~~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~ 207 (451)
....++..||.+|.+....+.+ .+.|+||++||.+.... .|......| .+||.|+++|+||+|.+...-...
T Consensus 418 ~~~~~~~~dg~~i~~~~~~p~~~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~- 496 (695)
T 2bkl_A 418 EQVFYASKDGTKVPMFVVHRKDLKRDGNAPTLLYGYGGFNVNMEANFRSSILPWLDAGGVYAVANLRGGGEYGKAWHDA- 496 (695)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCGGGHHHHHTTCEEEEECCTTSSTTCHHHHHT-
T ss_pred EEEEEECCCCCEEEEEEEECCCCCCCCCccEEEEECCCCccccCCCcCHHHHHHHhCCCEEEEEecCCCCCcCHHHHHh-
Confidence 3445556789999988765432 35689999999765543 455544444 668999999999998764210000
Q ss_pred CCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh--CCCCEEEEEeCcchHHHHHHHHhCCCccceEE
Q 013006 208 RSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV--IREPVYVVGNSLGGFVAVYFAACNPHLVKGVT 285 (451)
Q Consensus 208 ~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l--~~~~v~lvGhS~GG~val~~A~~~P~~v~~lv 285 (451)
+ ........++++++.+..+++.- ..+++.++|||+||.+++.++.++|++++++|
T Consensus 497 ---------------~-------~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v 554 (695)
T 2bkl_A 497 ---------------G-------RLDKKQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVV 554 (695)
T ss_dssp ---------------T-------SGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEE
T ss_pred ---------------h-------HhhcCCCcHHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcceEEEE
Confidence 0 00000123455555555555442 34689999999999999999999999999999
Q ss_pred EeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhcc
Q 013006 286 LLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQ 365 (451)
Q Consensus 286 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (451)
+.++...+.. .. ....... .. ..+.. ... .+.+..+..
T Consensus 555 ~~~~~~d~~~---------~~-------~~~~~~~----------------~~-----~~~g~-~~~-~~~~~~~~~--- 592 (695)
T 2bkl_A 555 CAVPLLDMVR---------YH-------LFGSGRT----------------WI-----PEYGT-AEK-PEDFKTLHA--- 592 (695)
T ss_dssp EESCCCCTTT---------GG-------GSTTGGG----------------GH-----HHHCC-TTS-HHHHHHHHH---
T ss_pred EcCCccchhh---------cc-------ccCCCcc----------------hH-----HHhCC-CCC-HHHHHHHHh---
Confidence 9987542110 00 0000000 00 00000 000 111111000
Q ss_pred ChhHHHHHHHHHhcCCCCCchhHHhhhccCCC--CCEEEEeeCCCCCCChHHHHHHHHHCCC-------CcEEEeCCCCC
Q 013006 366 HPAAAASFASIMFAPQGNLSFREALSRCQMNG--VPICLIYGKEDPWVKPVWGLQVKRQVPE-------APYYEISPAGH 436 (451)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~--~PvLii~G~~D~~v~~~~~~~l~~~lp~-------~~~~~i~~~gH 436 (451)
......+..++ +|+|+++|++|..+++..++++.+.++. +++++++++||
T Consensus 593 ---------------------~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH 651 (695)
T 2bkl_A 593 ---------------------YSPYHHVRPDVRYPALLMMAADHDDRVDPMHARKFVAAVQNSPGNPATALLRIEANAGH 651 (695)
T ss_dssp ---------------------HCGGGCCCSSCCCCEEEEEEETTCSSSCTHHHHHHHHHHHTSTTCCSCEEEEEETTCBT
T ss_pred ---------------------cChHhhhhhcCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhhccCCCCEEEEEeCCCCc
Confidence 01122334444 6999999999999999999888877644 67889999999
Q ss_pred Ccc
Q 013006 437 CPH 439 (451)
Q Consensus 437 ~~~ 439 (451)
...
T Consensus 652 ~~~ 654 (695)
T 2bkl_A 652 GGA 654 (695)
T ss_dssp TBC
T ss_pred CCC
Confidence 973
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=99.69 E-value=9.9e-17 Score=146.25 Aligned_cols=200 Identities=16% Similarity=0.143 Sum_probs=123.5
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAY 237 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 237 (451)
.+++|+|+||++++...|..++..|.+ ++|+++|+||+|..
T Consensus 16 ~~~~l~~~hg~~~~~~~~~~~~~~l~~-~~v~~~d~~g~~~~-------------------------------------- 56 (230)
T 1jmk_C 16 QEQIIFAFPPVLGYGLMYQNLSSRLPS-YKLCAFDFIEEEDR-------------------------------------- 56 (230)
T ss_dssp CSEEEEEECCTTCCGGGGHHHHHHCTT-EEEEEECCCCSTTH--------------------------------------
T ss_pred CCCCEEEECCCCCchHHHHHHHHhcCC-CeEEEecCCCHHHH--------------------------------------
Confidence 357899999999999999999999988 99999999987532
Q ss_pred CHHHHHHHHHHHHHHhCC-CCEEEEEeCcchHHHHHHHHhCC---CccceEEEeccCCCCCCCCCCCCchHHhhhcCCCC
Q 013006 238 SVDLWQDQVCYFIKEVIR-EPVYVVGNSLGGFVAVYFAACNP---HLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSG 313 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l~~-~~v~lvGhS~GG~val~~A~~~P---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (451)
++++.++++.+.. ++++++||||||.+++.+|.+++ +++++++++++.+.... . . +..
T Consensus 57 -----~~~~~~~i~~~~~~~~~~l~G~S~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~~~~~~-~------~------~~~ 118 (230)
T 1jmk_C 57 -----LDRYADLIQKLQPEGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGV-S------D------LDG 118 (230)
T ss_dssp -----HHHHHHHHHHHCCSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCC-C----------------
T ss_pred -----HHHHHHHHHHhCCCCCeEEEEECHhHHHHHHHHHHHHHcCCCccEEEEECCCCCCcc-c------c------ccc
Confidence 2355566677764 68999999999999999998764 67999999997542110 0 0 000
Q ss_pred CCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhc
Q 013006 314 TFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRC 393 (451)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 393 (451)
. ........+ +... ..............+.. ....+..+ .......
T Consensus 119 ~-~~~~~~~~~-----------------~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~----------~~~~~~~ 164 (230)
T 1jmk_C 119 R-TVESDVEAL-----------------MNVN-RDNEALNSEAVKHGLKQ-----KTHAFYSY----------YVNLIST 164 (230)
T ss_dssp -----CCHHHH-----------------HHHT-TTCSGGGSHHHHHHHHH-----HHHHHHHH----------HHHCCCC
T ss_pred c-cHHHHHHHH-----------------HhcC-hhhhhhhhHHHHHHHHH-----HHHHHHHH----------hhhcccc
Confidence 0 000000000 0000 00000000000000000 00000000 0111234
Q ss_pred cCCCCCEEEEeeCCCCCCChHHHHHHHHHCC-CCcEEEeCCCCC--CccccChHHHHhhh
Q 013006 394 QMNGVPICLIYGKEDPWVKPVWGLQVKRQVP-EAPYYEISPAGH--CPHDEVPEVCSLCL 450 (451)
Q Consensus 394 ~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp-~~~~~~i~~~gH--~~~~e~p~~v~~~I 450 (451)
..+++|+++++|++|..++. ....+.+..+ +.+++++++ || +++.++++++++.|
T Consensus 165 ~~~~~P~l~i~g~~D~~~~~-~~~~w~~~~~~~~~~~~i~g-~H~~~~~~~~~~~~~~~i 222 (230)
T 1jmk_C 165 GQVKADIDLLTSGADFDIPE-WLASWEEATTGAYRMKRGFG-THAEMLQGETLDRNAGIL 222 (230)
T ss_dssp SCBSSEEEEEECSSCCCCCT-TEECSGGGBSSCEEEEECSS-CGGGTTSHHHHHHHHHHH
T ss_pred ccccccEEEEEeCCCCCCcc-ccchHHHhcCCCeEEEEecC-ChHHHcCcHhHHHHHHHH
Confidence 67899999999999998873 2333444443 578899986 99 88888999988765
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.68 E-value=7.6e-16 Score=148.11 Aligned_cols=114 Identities=11% Similarity=0.087 Sum_probs=86.6
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCC---CChhcHHHHHHhhcC--CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhh
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFG---VGSFHYEKQLKDLGK--DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEE 217 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~---~~~~~~~~~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~ 217 (451)
+++.+.+..... ....|+||++||.+ ++...|..++..|++ ++.|+++|+|+.+....+
T Consensus 65 ~~i~~~~~~p~~-~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~--------------- 128 (322)
T 3fak_A 65 AGCAAEWVRAPG-CQAGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEHPFP--------------- 128 (322)
T ss_dssp TTEEEEEEECTT-CCTTCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTSEEEEECCCCTTTSCTT---------------
T ss_pred CCeEEEEEeCCC-CCCccEEEEEcCCccccCChHHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCC---------------
Confidence 466666554322 23578999999965 677788888888854 899999999987654211
Q ss_pred hhccccCCCCCCccccccccCHHHHHHHHHHHHHH-hCCCCEEEEEeCcchHHHHHHHHhCCCc----cceEEEeccCC
Q 013006 218 KNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKE-VIREPVYVVGNSLGGFVAVYFAACNPHL----VKGVTLLNATP 291 (451)
Q Consensus 218 ~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~-l~~~~v~lvGhS~GG~val~~A~~~P~~----v~~lvl~~~~~ 291 (451)
..+++..+.+..+++. ++.++++|+|||+||.+++.+|.+.|++ ++++|+++|..
T Consensus 129 -------------------~~~~D~~~a~~~l~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~ 188 (322)
T 3fak_A 129 -------------------AAVEDGVAAYRWLLDQGFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWA 188 (322)
T ss_dssp -------------------HHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCC
T ss_pred -------------------cHHHHHHHHHHHHHHcCCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEe
Confidence 3567777777777776 4456899999999999999999987765 99999999864
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.68 E-value=7.6e-16 Score=142.78 Aligned_cols=117 Identities=11% Similarity=0.095 Sum_probs=88.4
Q ss_pred CCeEEEEeecCCCC--------CCCCcEEEecCCCCChhcHHH--HHHhhcC--CceEEEEcCCCCCCCCCCCCCCCCCC
Q 013006 143 PKFNVHYEKAGCEN--------VNSPPVLFLPGFGVGSFHYEK--QLKDLGK--DYRAWAIDFLGQGMSLPDEDPTPRSK 210 (451)
Q Consensus 143 ~g~~l~y~~~g~~~--------~~~p~VlllHG~~~~~~~~~~--~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~~~~~~ 210 (451)
.|.++.+..+-|.+ .+.|+||++||++++...|.. .+..+.+ ++.|+++|.++++.+......
T Consensus 17 ~~~~~~~~v~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~----- 91 (263)
T 2uz0_A 17 LDMEWGVNVLYPDANRVEEPECEDIPVLYLLHGMSGNHNSWLKRTNVERLLRGTNLIVVMPNTSNGWYTDTQYGF----- 91 (263)
T ss_dssp TTEEEEEEEEECC---------CCBCEEEEECCTTCCTTHHHHHSCHHHHTTTCCCEEEECCCTTSTTSBCTTSC-----
T ss_pred hCCceeEEEEeCCCccccCCcCCCCCEEEEECCCCCCHHHHHhccCHHHHHhcCCeEEEEECCCCCccccCCCcc-----
Confidence 45566665554432 246899999999999999988 5666643 688888888887765432110
Q ss_pred CCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhC------CCCEEEEEeCcchHHHHHHHHhCCCccceE
Q 013006 211 EGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI------REPVYVVGNSLGGFVAVYFAACNPHLVKGV 284 (451)
Q Consensus 211 ~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~------~~~v~lvGhS~GG~val~~A~~~P~~v~~l 284 (451)
...+.+++++..+++.+. .++++++|||+||.+++.+|. +|++++++
T Consensus 92 --------------------------~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~~~~~ 144 (263)
T 2uz0_A 92 --------------------------DYYTALAEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TTNRFSHA 144 (263)
T ss_dssp --------------------------BHHHHHHTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-HHCCCSEE
T ss_pred --------------------------cHHHHHHHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-CccccceE
Confidence 235777888888888852 368999999999999999999 99999999
Q ss_pred EEeccCC
Q 013006 285 TLLNATP 291 (451)
Q Consensus 285 vl~~~~~ 291 (451)
+++++..
T Consensus 145 v~~~~~~ 151 (263)
T 2uz0_A 145 ASFSGAL 151 (263)
T ss_dssp EEESCCC
T ss_pred EEecCCc
Confidence 9999864
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=2.6e-16 Score=167.59 Aligned_cols=133 Identities=18% Similarity=0.070 Sum_probs=91.8
Q ss_pred cceeeecCCeEEEEeecCCCC----CCCCcEEEecCCCCChhc--HHHHH-Hhhc-CCceEEEEcCCCCCCCCCCCCCCC
Q 013006 136 SCFWEWKPKFNVHYEKAGCEN----VNSPPVLFLPGFGVGSFH--YEKQL-KDLG-KDYRAWAIDFLGQGMSLPDEDPTP 207 (451)
Q Consensus 136 ~~~~~~~~g~~l~y~~~g~~~----~~~p~VlllHG~~~~~~~--~~~~~-~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~ 207 (451)
...++..||.+|++....+.+ .+.|+||++||.+..... |.... ..+. +||.|+++|+||+|.+...-..
T Consensus 439 ~~~~~~~dg~~i~~~~~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~g~~~~~-- 516 (710)
T 2xdw_A 439 QIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHK-- 516 (710)
T ss_dssp EEEEECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHHHHH--
T ss_pred EEEEEcCCCCEEEEEEEecCCCCCCCCccEEEEEcCCCCCcCCCcccHHHHHHHHhCCcEEEEEccCCCCCCChHHHH--
Confidence 344556789999987765432 356899999998765543 44433 3446 7999999999999976321000
Q ss_pred CCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHH--hCCCCEEEEEeCcchHHHHHHHHhCCCccceEE
Q 013006 208 RSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKE--VIREPVYVVGNSLGGFVAVYFAACNPHLVKGVT 285 (451)
Q Consensus 208 ~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~--l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lv 285 (451)
.+ ........++++++.+..+++. ...++++++|||+||.+++.++.++|++++++|
T Consensus 517 ----------------~~-----~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v 575 (710)
T 2xdw_A 517 ----------------GG-----ILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVI 575 (710)
T ss_dssp ----------------TT-----SGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEE
T ss_pred ----------------hh-----hhhcCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEE
Confidence 00 0000013456666666666655 234689999999999999999999999999999
Q ss_pred EeccCC
Q 013006 286 LLNATP 291 (451)
Q Consensus 286 l~~~~~ 291 (451)
+..+..
T Consensus 576 ~~~~~~ 581 (710)
T 2xdw_A 576 AQVGVM 581 (710)
T ss_dssp EESCCC
T ss_pred EcCCcc
Confidence 998753
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.66 E-value=8.3e-16 Score=151.34 Aligned_cols=132 Identities=13% Similarity=0.023 Sum_probs=90.7
Q ss_pred cceeeec-CCeEEEEeecCCCC----CCCCcEEEecCCCCChhcHHHH-H-----Hh-------hcCCceEEEEcCCCCC
Q 013006 136 SCFWEWK-PKFNVHYEKAGCEN----VNSPPVLFLPGFGVGSFHYEKQ-L-----KD-------LGKDYRAWAIDFLGQG 197 (451)
Q Consensus 136 ~~~~~~~-~g~~l~y~~~g~~~----~~~p~VlllHG~~~~~~~~~~~-~-----~~-------L~~~~~Vi~~D~rG~G 197 (451)
...+... +|.+++|..+.|.+ ...|+||++||++.+...+... + .. ...++.|+++|.+|.+
T Consensus 146 ~~~~~~~~dg~~l~~~v~~P~~~~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~~g~~ 225 (380)
T 3doh_A 146 AFTFKDPETGVEIPYRLFVPKDVNPDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPPNS 225 (380)
T ss_dssp EEEEECTTTCCEEEEEEECCSSCCTTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECCCTTC
T ss_pred ceeeccCCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEecCCCCC
Confidence 3445555 88999999887653 2237899999998664432111 1 01 1235789999999876
Q ss_pred CCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCC--CEEEEEeCcchHHHHHHHH
Q 013006 198 MSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIRE--PVYVVGNSLGGFVAVYFAA 275 (451)
Q Consensus 198 ~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~--~v~lvGhS~GG~val~~A~ 275 (451)
.....-... .........++++.+.+..+++..+++ +++|+||||||.+++.++.
T Consensus 226 ~~~~~~~~~-----------------------~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~ 282 (380)
T 3doh_A 226 SWSTLFTDR-----------------------ENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIM 282 (380)
T ss_dssp CSBTTTTCS-----------------------SCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHH
T ss_pred ccccccccc-----------------------ccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHH
Confidence 542110000 000001246777888888888887764 7999999999999999999
Q ss_pred hCCCccceEEEeccC
Q 013006 276 CNPHLVKGVTLLNAT 290 (451)
Q Consensus 276 ~~P~~v~~lvl~~~~ 290 (451)
++|+++++++++++.
T Consensus 283 ~~p~~~~~~v~~sg~ 297 (380)
T 3doh_A 283 EFPELFAAAIPICGG 297 (380)
T ss_dssp HCTTTCSEEEEESCC
T ss_pred hCCccceEEEEecCC
Confidence 999999999999974
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.3e-15 Score=144.92 Aligned_cols=120 Identities=17% Similarity=0.139 Sum_probs=83.7
Q ss_pred cCCeEEEEeecCCCC--CCCCcEEEecCCCCChhcH-HHHHHhhc-CCceEEEEcCC------------CC--CCCCCCC
Q 013006 142 KPKFNVHYEKAGCEN--VNSPPVLFLPGFGVGSFHY-EKQLKDLG-KDYRAWAIDFL------------GQ--GMSLPDE 203 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~--~~~p~VlllHG~~~~~~~~-~~~~~~L~-~~~~Vi~~D~r------------G~--G~S~~~~ 203 (451)
.+|.++.+..+-|.+ +..|+||++||++.+...| ..+...|. .+|.|+++|+| |+ |.|....
T Consensus 35 ~~~~~l~~~~~~P~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~~~p~~~~~~~g~~~g~s~~~~ 114 (304)
T 3d0k_A 35 NADRPFTLNTYRPYGYTPDRPVVVVQHGVLRNGADYRDFWIPAADRHKLLIVAPTFSDEIWPGVESYNNGRAFTAAGNPR 114 (304)
T ss_dssp CTTCCEEEEEEECTTCCTTSCEEEEECCTTCCHHHHHHHTHHHHHHHTCEEEEEECCTTTSCHHHHTTTTTCBCTTSCBC
T ss_pred CCCceEEEEEEeCCCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHHHCCcEEEEeCCccccCCCccccccCccccccCCCC
Confidence 456666666444432 4568999999999998888 66677775 48999999999 44 4443211
Q ss_pred CCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh--CCCCEEEEEeCcchHHHHHHHHhCCC-c
Q 013006 204 DPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV--IREPVYVVGNSLGGFVAVYFAACNPH-L 280 (451)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l--~~~~v~lvGhS~GG~val~~A~~~P~-~ 280 (451)
.. ....++++.+.+..+.+.. ..++++|+||||||.+++.+|.++|+ +
T Consensus 115 ~~-----------------------------~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~ 165 (304)
T 3d0k_A 115 HV-----------------------------DGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAP 165 (304)
T ss_dssp CG-----------------------------GGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTT
T ss_pred cc-----------------------------cchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCc
Confidence 00 0124444444444444433 35789999999999999999999995 8
Q ss_pred cceEEEeccC
Q 013006 281 VKGVTLLNAT 290 (451)
Q Consensus 281 v~~lvl~~~~ 290 (451)
++++|++++.
T Consensus 166 ~~~~vl~~~~ 175 (304)
T 3d0k_A 166 FHAVTAANPG 175 (304)
T ss_dssp CSEEEEESCS
T ss_pred eEEEEEecCc
Confidence 9999988753
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.66 E-value=4.8e-16 Score=166.38 Aligned_cols=131 Identities=11% Similarity=-0.031 Sum_probs=92.8
Q ss_pred ceeeecCCeEEEEeecCCC----CCCCCcEEEecCCCCChh--cHHHHHHhh-cCCceEEEEcCCCCCCCCCCCCC-CCC
Q 013006 137 CFWEWKPKFNVHYEKAGCE----NVNSPPVLFLPGFGVGSF--HYEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDP-TPR 208 (451)
Q Consensus 137 ~~~~~~~g~~l~y~~~g~~----~~~~p~VlllHG~~~~~~--~~~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~-~~~ 208 (451)
..++..||.+|++...-+. +.+.|+||++||.++... .|......| .+||.|+++|+||+|.+...-.. .
T Consensus 483 ~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~HGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~G~~~~~~~-- 560 (751)
T 2xe4_A 483 RFATAPDQTKIPLSVVYHKDLDMSQPQPCMLYGYGSYGLSMDPQFSIQHLPYCDRGMIFAIAHIRGGSELGRAWYEIG-- 560 (751)
T ss_dssp EEEECTTCCEEEEEEEEETTSCTTSCCCEEEECCCCTTCCCCCCCCGGGHHHHTTTCEEEEECCTTSCTTCTHHHHTT--
T ss_pred EEEECCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCcCCCCcchHHHHHHHhCCcEEEEEeeCCCCCcCcchhhcc--
Confidence 3455568988886554332 235689999999876544 455555555 56899999999999976421000 0
Q ss_pred CCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHH--hCCCCEEEEEeCcchHHHHHHHHhCCCccceEEE
Q 013006 209 SKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKE--VIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTL 286 (451)
Q Consensus 209 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~--l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl 286 (451)
........+++++++.+..+++. ...+++.++|+|+||++++.++.++|++++++|+
T Consensus 561 ---------------------~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~~~a~v~ 619 (751)
T 2xe4_A 561 ---------------------AKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDLFKVALA 619 (751)
T ss_dssp ---------------------SSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEE
T ss_pred ---------------------ccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCchheeEEEE
Confidence 00001124677888888777776 2347899999999999999999999999999999
Q ss_pred eccC
Q 013006 287 LNAT 290 (451)
Q Consensus 287 ~~~~ 290 (451)
..+.
T Consensus 620 ~~~~ 623 (751)
T 2xe4_A 620 GVPF 623 (751)
T ss_dssp ESCC
T ss_pred eCCc
Confidence 9875
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=4.2e-15 Score=140.06 Aligned_cols=169 Identities=19% Similarity=0.147 Sum_probs=110.9
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcC---CceEEEEcCC------CCCCCCCCCCCCCCCCCCCchhhhhccccCCCCC
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGK---DYRAWAIDFL------GQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKA 228 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~---~~~Vi~~D~r------G~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 228 (451)
..|.|||+||+|++...|..+.+.|.. ++.+++++-| |.|.+-... ..++...
T Consensus 65 ~~plVI~LHG~G~~~~~~~~~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~------------------~~~~~~~ 126 (285)
T 4fhz_A 65 ATSLVVFLHGYGADGADLLGLAEPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPI------------------PWLDGSS 126 (285)
T ss_dssp CSEEEEEECCTTBCHHHHHTTHHHHGGGSTTEEEEEECCSEECTTSSSCEESSCC------------------HHHHCCC
T ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHHhCCCeEEEecCCCcccccCCCccccccc------------------ccccCcc
Confidence 457899999999999999988888854 5788888754 222210000 0000000
Q ss_pred CccccccccCHHHHHHHHHHHH----HHhCC--CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCc
Q 013006 229 QPWASELAYSVDLWQDQVCYFI----KEVIR--EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRS 302 (451)
Q Consensus 229 ~~~~~~~~~s~~~~a~dv~~ll----~~l~~--~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~ 302 (451)
... ....+...++++.+++ +..++ ++++|+|+|+||.+++.++.++|++++++|.+++...
T Consensus 127 ~~~---~~~~~~~~~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~---------- 193 (285)
T 4fhz_A 127 ETA---AAEGMAAAARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLL---------- 193 (285)
T ss_dssp HHH---HHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCS----------
T ss_pred cch---hhHHHHHHHHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCcc----------
Confidence 000 0012223334444444 44454 6799999999999999999999999999999986310
Q ss_pred hHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCC
Q 013006 303 PKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQG 382 (451)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (451)
. +..
T Consensus 194 --------------~-----------------~~~--------------------------------------------- 197 (285)
T 4fhz_A 194 --------------A-----------------PER--------------------------------------------- 197 (285)
T ss_dssp --------------C-----------------HHH---------------------------------------------
T ss_pred --------------C-----------------chh---------------------------------------------
Confidence 0 000
Q ss_pred CCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC----CCcEEEeCCCCCCccc
Q 013006 383 NLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP----EAPYYEISPAGHCPHD 440 (451)
Q Consensus 383 ~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp----~~~~~~i~~~gH~~~~ 440 (451)
.......+.|++++||++|++||.+.++++.+.+. +++++++++.||.+..
T Consensus 198 -------~~~~~~~~~Pvl~~hG~~D~~Vp~~~~~~~~~~L~~~g~~~~~~~y~g~gH~i~~ 252 (285)
T 4fhz_A 198 -------LAEEARSKPPVLLVHGDADPVVPFADMSLAGEALAEAGFTTYGHVMKGTGHGIAP 252 (285)
T ss_dssp -------HHHHCCCCCCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEETTCCSSCCH
T ss_pred -------hhhhhhhcCcccceeeCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCH
Confidence 00001246899999999999999998877766543 4678899999998753
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=99.65 E-value=1.4e-15 Score=150.56 Aligned_cols=109 Identities=16% Similarity=0.094 Sum_probs=77.3
Q ss_pred CCCcEEEecCCCCChhc-----------HHHHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCC
Q 013006 158 NSPPVLFLPGFGVGSFH-----------YEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFG 225 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~-----------~~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~ 225 (451)
..|+||++||++++... |..++..| ++||.|+++|+||||.|.....+...
T Consensus 78 ~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~~~~~----------------- 140 (397)
T 3h2g_A 78 PYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVVVGSDYLGLGKSNYAYHPYLH----------------- 140 (397)
T ss_dssp CEEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGGGTCEEEEECCTTSTTCCCSSCCTTC-----------------
T ss_pred CCcEEEEeCCCcCCCCcccccccccccchHHHHHHHHHCCCEEEEecCCCCCCCCCCccchhh-----------------
Confidence 45789999999887654 55677777 56899999999999999643222100
Q ss_pred CCCCccccccccCHHHHHHHHHHHHHHhCC---CCEEEEEeCcchHHHHHHHHh-CCC-----ccceEEEecc
Q 013006 226 DKAQPWASELAYSVDLWQDQVCYFIKEVIR---EPVYVVGNSLGGFVAVYFAAC-NPH-----LVKGVTLLNA 289 (451)
Q Consensus 226 ~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~---~~v~lvGhS~GG~val~~A~~-~P~-----~v~~lvl~~~ 289 (451)
......++.++++++..+++++++ ++++++||||||.+++.+|.. .++ .+.+++..++
T Consensus 141 ------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~~~~~~ 207 (397)
T 3h2g_A 141 ------SASEASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVASAPISG 207 (397)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEEEEEEESC
T ss_pred ------hhhHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceEEEecccc
Confidence 000013566778888888888887 789999999999999988733 222 4566666554
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.9e-15 Score=142.19 Aligned_cols=132 Identities=19% Similarity=0.292 Sum_probs=90.2
Q ss_pred ecCCeEEEEeecCCCC---CCCCcEEEecCCCCChhcHHH---HHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013006 141 WKPKFNVHYEKAGCEN---VNSPPVLFLPGFGVGSFHYEK---QLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGD 213 (451)
Q Consensus 141 ~~~g~~l~y~~~g~~~---~~~p~VlllHG~~~~~~~~~~---~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~ 213 (451)
...|.++.+..+-|.+ ...|+||++||++.+...|.. +...+. .++.|+++|.+++|.......
T Consensus 30 ~~~~~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rg~~~~~~~--------- 100 (283)
T 4b6g_A 30 QTLQCEMKFAVYLPNNPENRPLGVIYWLSGLTCTEQNFITKSGFQRYAAEHQVIVVAPDTSPRGEQVPNDD--------- 100 (283)
T ss_dssp TTTTEEEEEEEEECCCTTCCCEEEEEEECCTTCCSHHHHHHSCTHHHHHHHTCEEEEECSSCCSTTSCCCS---------
T ss_pred hhhCCceEEEEEeCCCCCCCCCCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEEeccccccccccccc---------
Confidence 3457777777665542 345899999999998888854 233343 479999999876665532211
Q ss_pred chhhhhccccCCCCC--------CccccccccC-HHHHHHHHHHHHHHh--CCCCEEEEEeCcchHHHHHHHHhCCCccc
Q 013006 214 STEEKNFLWGFGDKA--------QPWASELAYS-VDLWQDQVCYFIKEV--IREPVYVVGNSLGGFVAVYFAACNPHLVK 282 (451)
Q Consensus 214 ~~~~~~~~w~~~~~~--------~~~~~~~~~s-~~~~a~dv~~ll~~l--~~~~v~lvGhS~GG~val~~A~~~P~~v~ 282 (451)
.|.++... .++.. .+. .+.+++++..++++. ..++++|+||||||.+|+.+|.++|++++
T Consensus 101 -------~~~~G~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~ 171 (283)
T 4b6g_A 101 -------AYDLGQSAGFYLNATEQPWAA--NYQMYDYILNELPRLIEKHFPTNGKRSIMGHSMGGHGALVLALRNQERYQ 171 (283)
T ss_dssp -------STTSBTTBCTTSBCCSTTGGG--TCBHHHHHHTHHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHHHGGGCS
T ss_pred -------cccccCCCcccccCccCcccc--hhhHHHHHHHHHHHHHHHhCCCCCCeEEEEEChhHHHHHHHHHhCCccce
Confidence 12111110 11111 123 444567888888876 33789999999999999999999999999
Q ss_pred eEEEeccC
Q 013006 283 GVTLLNAT 290 (451)
Q Consensus 283 ~lvl~~~~ 290 (451)
+++++++.
T Consensus 172 ~~~~~s~~ 179 (283)
T 4b6g_A 172 SVSAFSPI 179 (283)
T ss_dssp CEEEESCC
T ss_pred eEEEECCc
Confidence 99999985
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=99.65 E-value=4.7e-16 Score=128.95 Aligned_cols=97 Identities=18% Similarity=0.205 Sum_probs=84.0
Q ss_pred eecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhh
Q 013006 140 EWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKN 219 (451)
Q Consensus 140 ~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~ 219 (451)
...+|.+++|...|+ +|+|||+| .+...|..+ |+++|+|+++|+||||.|.....
T Consensus 7 ~~~~g~~~~~~~~g~----~~~vv~~H---~~~~~~~~~---l~~~~~v~~~d~~G~G~s~~~~~--------------- 61 (131)
T 2dst_A 7 LHLYGLNLVFDRVGK----GPPVLLVA---EEASRWPEA---LPEGYAFYLLDLPGYGRTEGPRM--------------- 61 (131)
T ss_dssp EEETTEEEEEEEECC----SSEEEEES---SSGGGCCSC---CCTTSEEEEECCTTSTTCCCCCC---------------
T ss_pred EEECCEEEEEEEcCC----CCeEEEEc---CCHHHHHHH---HhCCcEEEEECCCCCCCCCCCCC---------------
Confidence 345799999999883 68999999 566777776 87789999999999999964321
Q ss_pred ccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCC
Q 013006 220 FLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPH 279 (451)
Q Consensus 220 ~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~ 279 (451)
. ++++++++.++++.++.++++++||||||.+++.+|.++|.
T Consensus 62 -----------------~-~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 62 -----------------A-PEELAHFVAGFAVMMNLGAPWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp -----------------C-HHHHHHHHHHHHHHTTCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred -----------------C-HHHHHHHHHHHHHHcCCCccEEEEEChHHHHHHHHHhcCCc
Confidence 2 88999999999999999999999999999999999999984
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.64 E-value=1.3e-14 Score=154.62 Aligned_cols=208 Identities=13% Similarity=0.058 Sum_probs=116.1
Q ss_pred Hhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCC---
Q 013006 180 KDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR--- 255 (451)
Q Consensus 180 ~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~--- 255 (451)
..| ++||.|+++|.||+|.|+..... +.. ..++|+.++++.+..
T Consensus 275 ~~la~~GYaVv~~D~RG~G~S~G~~~~-------------------------------~~~-~e~~D~~a~IdwL~~~~~ 322 (763)
T 1lns_A 275 DYFLTRGFASIYVAGVGTRSSDGFQTS-------------------------------GDY-QQIYSMTAVIDWLNGRAR 322 (763)
T ss_dssp HHHHTTTCEEEEECCTTSTTSCSCCCT-------------------------------TSH-HHHHHHHHHHHHHTTSSC
T ss_pred HHHHHCCCEEEEECCCcCCCCCCcCCC-------------------------------CCH-HHHHHHHHHHHHHhhccc
Confidence 445 56899999999999999743211 333 467888888888862
Q ss_pred -----------------CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhh--cCCCCCCC
Q 013006 256 -----------------EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARI--LPWSGTFP 316 (451)
Q Consensus 256 -----------------~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 316 (451)
.+|.++||||||++++.+|+.+|++++++|..++...+. ...... .......+
T Consensus 323 ~~~d~~~~~~v~q~~~~grVgl~G~SyGG~ial~~Aa~~p~~lkaiV~~~~~~d~~--------~~~~~~g~~~~~~g~~ 394 (763)
T 1lns_A 323 AYTSRKKTHEIKASWANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWY--------NYYRENGLVRSPGGFP 394 (763)
T ss_dssp EESSTTCCCEECCTTEEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHH--------HHHBSSSSBCCCTTCT
T ss_pred ccccccccccccccCCCCcEEEEEECHHHHHHHHHHHhCCcccEEEEEecccccHH--------HHhhhcchhhhcccCC
Confidence 479999999999999999999999999999998753110 000000 00000010
Q ss_pred ChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhc--cChhHHHHHHHHHhcCCCCCchhHHhhhcc
Q 013006 317 LPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETT--QHPAAAASFASIMFAPQGNLSFREALSRCQ 394 (451)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 394 (451)
. .....+................. ...+ ......+.... ..+.. . .+. ...+....+.
T Consensus 395 ~-~~~~~l~~~~~~~~~~~g~~~~~-~~~~-------~~~~~~~~~~~~~~~~~~-~---~~w-------~~~s~~~~l~ 454 (763)
T 1lns_A 395 G-EDLDVLAALTYSRNLDGADFLKG-NAEY-------EKRLAEMTAALDRKSGDY-N---QFW-------HDRNYLINTD 454 (763)
T ss_dssp T-CCHHHHHHHHCGGGGSHHHHHHH-HHHH-------HHHHHHHHHHHCTTTCCC-C---HHH-------HTTBGGGGGG
T ss_pred c-hhhhHHhHHHHhhhcCcchhhhH-HHHH-------HHHHHHHHhhhhhccCch-h---HHh-------hccChhhHhh
Confidence 0 00111111000000000000000 0000 00000000000 00000 0 000 0012344567
Q ss_pred CCCCCEEEEeeCCCCCCChHHHHHHHHHCCC--CcEEEeCCCCCCcccc-ChHHHH
Q 013006 395 MNGVPICLIYGKEDPWVKPVWGLQVKRQVPE--APYYEISPAGHCPHDE-VPEVCS 447 (451)
Q Consensus 395 ~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~--~~~~~i~~~gH~~~~e-~p~~v~ 447 (451)
+|++|+|+|+|.+|..+++..+.++.+.+++ ....++.++||+.+.+ .++++.
T Consensus 455 ~I~~PvLii~G~~D~~vp~~~a~~l~~al~~~~~~~l~i~~~gH~~~~~~~~~~~~ 510 (763)
T 1lns_A 455 KVKADVLIVHGLQDWNVTPEQAYNFWKALPEGHAKHAFLHRGAHIYMNSWQSIDFS 510 (763)
T ss_dssp GCCSEEEEEEETTCCSSCTHHHHHHHHHSCTTCCEEEEEESCSSCCCTTBSSCCHH
T ss_pred cCCCCEEEEEECCCCCCChHHHHHHHHhhccCCCeEEEEeCCcccCccccchHHHH
Confidence 8999999999999999999999999999975 3445567889997655 444443
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=1e-14 Score=142.79 Aligned_cols=99 Identities=19% Similarity=0.194 Sum_probs=71.3
Q ss_pred CCCcEEEecCCCC---Ch--hcHHHHHHhhcC--CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCc
Q 013006 158 NSPPVLFLPGFGV---GS--FHYEKQLKDLGK--DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQP 230 (451)
Q Consensus 158 ~~p~VlllHG~~~---~~--~~~~~~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 230 (451)
..|+||++||.+. +. ..|..++..|+. ++.|+++|+|+.+....+
T Consensus 111 ~~Pvvv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~Vv~~dyR~~p~~~~~---------------------------- 162 (365)
T 3ebl_A 111 PFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYP---------------------------- 162 (365)
T ss_dssp CCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEEEECCCCTTTSCTT----------------------------
T ss_pred cceEEEEEcCCccccCCCchhhHHHHHHHHHHHCCCEEEEeeCCCCCCCCCc----------------------------
Confidence 4689999999753 22 237788888854 899999999976533210
Q ss_pred cccccccCHHHHHHHHHHHHHH------hCCC-CEEEEEeCcchHHHHHHHHhCCC---ccceEEEeccC
Q 013006 231 WASELAYSVDLWQDQVCYFIKE------VIRE-PVYVVGNSLGGFVAVYFAACNPH---LVKGVTLLNAT 290 (451)
Q Consensus 231 ~~~~~~~s~~~~a~dv~~ll~~------l~~~-~v~lvGhS~GG~val~~A~~~P~---~v~~lvl~~~~ 290 (451)
..++|..+.+..+.+. ...+ +++|+|||+||.+|+.+|.+.++ +++++|+++|.
T Consensus 163 ------~~~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~g~vl~~p~ 226 (365)
T 3ebl_A 163 ------CAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAADEGVKVCGNILLNAM 226 (365)
T ss_dssp ------HHHHHHHHHHHHHHHCTTTEETTTTEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCEEEEESCC
T ss_pred ------HHHHHHHHHHHHHHhCchhhhCCCCCCcEEEEeeCccHHHHHHHHHHHHhcCCceeeEEEEccc
Confidence 2344444444444432 2235 89999999999999999998766 89999999985
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=8.9e-16 Score=163.04 Aligned_cols=220 Identities=14% Similarity=0.067 Sum_probs=129.2
Q ss_pred cceeeecCCeEEEEeecCCC----CCCCCcEEEecCCCCCh--hcHHHHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCC
Q 013006 136 SCFWEWKPKFNVHYEKAGCE----NVNSPPVLFLPGFGVGS--FHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPR 208 (451)
Q Consensus 136 ~~~~~~~~g~~l~y~~~g~~----~~~~p~VlllHG~~~~~--~~~~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~ 208 (451)
..+++..||.+|.+....+. +.+.|+||++||..+.. ..|......| .+||.|+++|+||.|.....-...
T Consensus 427 ~~~~~~~dg~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~-- 504 (693)
T 3iuj_A 427 QRFYQSKDGTRVPLIISYRKGLKLDGSNPTILYGYGGFDVSLTPSFSVSVANWLDLGGVYAVANLRGGGEYGQAWHLA-- 504 (693)
T ss_dssp EEEEECTTSCEEEEEEEEESSCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHHHTTCEEEEECCTTSSTTCHHHHHT--
T ss_pred EEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCcCCCCccCHHHHHHHHCCCEEEEEeCCCCCccCHHHHHh--
Confidence 34455678998888766443 23568999999976543 3355545454 678999999999998763210000
Q ss_pred CCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh--CCCCEEEEEeCcchHHHHHHHHhCCCccceEEE
Q 013006 209 SKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV--IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTL 286 (451)
Q Consensus 209 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l--~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl 286 (451)
+ .......+++++++.+..+++.- ..+++.++|||+||++++.++.++|++++++|+
T Consensus 505 ----------------~-----~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~ 563 (693)
T 3iuj_A 505 ----------------G-----TQQNKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVALP 563 (693)
T ss_dssp ----------------T-----SGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTSCSEEEE
T ss_pred ----------------h-----hhhcCCCcHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCccceeEEEe
Confidence 0 00001134666776666666552 236899999999999999999999999999999
Q ss_pred eccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccC
Q 013006 287 LNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQH 366 (451)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (451)
..+...+.. .. . +.... .....+... ......+..+..
T Consensus 564 ~~~~~d~~~------~~---~-------~~~~~---------------------~~~~~~g~p-~~~~~~~~~~~~---- 601 (693)
T 3iuj_A 564 AVGVLDMLR------YH---T-------FTAGT---------------------GWAYDYGTS-ADSEAMFDYLKG---- 601 (693)
T ss_dssp ESCCCCTTT------GG---G-------SGGGG---------------------GCHHHHCCT-TSCHHHHHHHHH----
T ss_pred cCCcchhhh------hc---c-------CCCch---------------------hHHHHcCCc-cCHHHHHHHHHh----
Confidence 987532100 00 0 00000 000001110 010110111000
Q ss_pred hhHHHHHHHHHhcCCCCCchhHHhhhccC-CCCC-EEEEeeCCCCCCChHHHHHHHHHCCC-------CcEEEeCCCCCC
Q 013006 367 PAAAASFASIMFAPQGNLSFREALSRCQM-NGVP-ICLIYGKEDPWVKPVWGLQVKRQVPE-------APYYEISPAGHC 437 (451)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~P-vLii~G~~D~~v~~~~~~~l~~~lp~-------~~~~~i~~~gH~ 437 (451)
......+.. +++| +|+++|++|..|++..+.++.+.++. +++++++++||.
T Consensus 602 --------------------~sp~~~~~~~~~~Pp~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~ 661 (693)
T 3iuj_A 602 --------------------YSPLHNVRPGVSYPSTMVTTADHDDRVVPAHSFKFAATLQADNAGPHPQLIRIETNAGHG 661 (693)
T ss_dssp --------------------HCHHHHCCTTCCCCEEEEEEESSCSSSCTHHHHHHHHHHHHHCCSSSCEEEEEEC-----
T ss_pred --------------------cCHHHhhcccCCCCceeEEecCCCCCCChhHHHHHHHHHHhhCCCCCCEEEEEeCCCCCC
Confidence 112234555 7888 99999999999999988877776543 468899999998
Q ss_pred ccc
Q 013006 438 PHD 440 (451)
Q Consensus 438 ~~~ 440 (451)
...
T Consensus 662 ~~~ 664 (693)
T 3iuj_A 662 AGT 664 (693)
T ss_dssp --C
T ss_pred Ccc
Confidence 764
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=99.62 E-value=6.5e-17 Score=161.51 Aligned_cols=104 Identities=18% Similarity=0.246 Sum_probs=87.6
Q ss_pred CCCCcEEEecCCCCCh-hcHHH-HHHhhc--CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccc
Q 013006 157 VNSPPVLFLPGFGVGS-FHYEK-QLKDLG--KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWA 232 (451)
Q Consensus 157 ~~~p~VlllHG~~~~~-~~~~~-~~~~L~--~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 232 (451)
+++|+|||+||++++. ..|.. +.+.|. .+|+|+++|+||+|.|....
T Consensus 68 ~~~~~vvllHG~~~s~~~~w~~~~~~~l~~~~~~~Vi~~D~~g~g~s~~~~----------------------------- 118 (432)
T 1gpl_A 68 LNRKTRFIIHGFTDSGENSWLSDMCKNMFQVEKVNCICVDWKGGSKAQYSQ----------------------------- 118 (432)
T ss_dssp TTSEEEEEECCTTCCTTSHHHHHHHHHHHHHCCEEEEEEECHHHHTSCHHH-----------------------------
T ss_pred CCCCeEEEECCCCCCCCchHHHHHHHHHHhcCCcEEEEEECccccCccchh-----------------------------
Confidence 4678999999999998 68987 778886 48999999999999985211
Q ss_pred cccccCHHHHHHHHHHHHHHh----C--CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 233 SELAYSVDLWQDQVCYFIKEV----I--REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 233 ~~~~~s~~~~a~dv~~ll~~l----~--~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
...+.+.+++|+.++++.+ + .++++||||||||.+|+.+|.++|++|++++++++..
T Consensus 119 --~~~~~~~~~~dl~~~i~~l~~~~g~~~~~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~ 181 (432)
T 1gpl_A 119 --ASQNIRVVGAEVAYLVQVLSTSLNYAPENVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAE 181 (432)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBC
T ss_pred --hHhhHHHHHHHHHHHHHHHHHhcCCCcccEEEEEeCHHHHHHHHHHHhcccccceeEEecccc
Confidence 0146678888888888877 4 5899999999999999999999999999999999863
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=2.7e-15 Score=147.89 Aligned_cols=127 Identities=17% Similarity=0.142 Sum_probs=80.1
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccc--cc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWA--SE 234 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~--~~ 234 (451)
+.|+|||+||++++...|..++..|++ ||.|+++|+||+|.|........ ...+.....|.......... ..
T Consensus 97 ~~P~Vv~~HG~~~~~~~~~~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~ 171 (383)
T 3d59_A 97 KYPLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQ-----SAAEIGDKSWLYLRTLKQEEETHI 171 (383)
T ss_dssp CEEEEEEECCTTCCTTTTHHHHHHHHHTTCEEEEECCCSSCSSEEEECSSH-----HHHHHTCCEEEECCCCCHHHHHHH
T ss_pred CCCEEEEcCCCCCCchHHHHHHHHHHhCceEEEEeccCCCCccceeecCCc-----cccccCCceeeeccccCcccchhh
Confidence 458899999999999999999999965 79999999999998742100000 00000001111100000000 00
Q ss_pred cccCHHHHHHHHHHHHHHh--------------------------CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEec
Q 013006 235 LAYSVDLWQDQVCYFIKEV--------------------------IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLN 288 (451)
Q Consensus 235 ~~~s~~~~a~dv~~ll~~l--------------------------~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~ 288 (451)
....++..++|+..+++.+ +.+++.++|||+||.+++.++...| +|+++|+++
T Consensus 172 ~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~-~v~a~v~~~ 250 (383)
T 3d59_A 172 RNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQ-RFRCGIALD 250 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEES
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhhCC-CccEEEEeC
Confidence 0012333456666665543 2357999999999999999988876 699999998
Q ss_pred cC
Q 013006 289 AT 290 (451)
Q Consensus 289 ~~ 290 (451)
+.
T Consensus 251 ~~ 252 (383)
T 3d59_A 251 AW 252 (383)
T ss_dssp CC
T ss_pred Cc
Confidence 73
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=5.6e-16 Score=153.93 Aligned_cols=122 Identities=17% Similarity=0.159 Sum_probs=90.2
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcC-Cc---eEEEEcCCCCCCC-----CCCCCCCCCCCCCCchhhhh---------
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGK-DY---RAWAIDFLGQGMS-----LPDEDPTPRSKEGDSTEEKN--------- 219 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~-~~---~Vi~~D~rG~G~S-----~~~~~~~~~~~~~~~~~~~~--------- 219 (451)
++++|||+||++++...|..++..|.+ +| +|+++|+||||.| +....... ...+.+
T Consensus 21 ~~ppVVLlHG~g~s~~~w~~la~~La~~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~~------~~~G~n~~p~id~~~ 94 (484)
T 2zyr_A 21 DFRPVVFVHGLAGSAGQFESQGMRFAANGYPAEYVKTFEYDTISWALVVETDMLFSGLG------SEFGLNISQIIDPET 94 (484)
T ss_dssp CCCCEEEECCTTCCGGGGHHHHHHHHHTTCCGGGEEEECCCHHHHHHHTTTSTTTTTGG------GHHHHHHGGGSCHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHcCCCcceEEEEECCCCCccccccccccccccc------ccccccccccccccc
Confidence 568999999999999999999999965 68 8999999999976 11100000 000000
Q ss_pred --ccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCC---CccceEEEeccC
Q 013006 220 --FLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNP---HLVKGVTLLNAT 290 (451)
Q Consensus 220 --~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P---~~v~~lvl~~~~ 290 (451)
..| +. +......++.+++++++..++++++.++++||||||||.+++.++.++| ++|+++|++++.
T Consensus 95 l~~v~-~~----~~~~~~~~~~~dla~~L~~ll~~lg~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp 165 (484)
T 2zyr_A 95 LDKIL-SK----SRERLIDETFSRLDRVIDEALAESGADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGV 165 (484)
T ss_dssp HHHHH-TS----CHHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCC
T ss_pred ccccc-cc----cccCchhhhHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCc
Confidence 000 00 0001123567888899999999999999999999999999999999998 489999999975
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.60 E-value=3e-15 Score=138.09 Aligned_cols=195 Identities=15% Similarity=0.156 Sum_probs=122.0
Q ss_pred eEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC---CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhcc
Q 013006 145 FNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK---DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFL 221 (451)
Q Consensus 145 ~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~---~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~ 221 (451)
..+.|+...|.++.+.+|||+||+|++...|..+++.|.. ++++++++-|-........ .....+
T Consensus 23 ~~l~y~ii~P~~~~~~~VI~LHG~G~~~~dl~~l~~~l~~~~~~~~~i~P~Ap~~~~~~~~~------------~~~~~W 90 (246)
T 4f21_A 23 NAMNYELMEPAKQARFCVIWLHGLGADGHDFVDIVNYFDVSLDEIRFIFPHADIIPVTINMG------------MQMRAW 90 (246)
T ss_dssp CCCCEEEECCSSCCCEEEEEEEC--CCCCCGGGGGGGCCSCCTTEEEEEECGGGSCTTTHHH------------HHHHSC
T ss_pred CCcCceEeCCCCcCCeEEEEEcCCCCCHHHHHHHHHHhhhcCCCeEEEeCCCCccccccCCC------------CCcccc
Confidence 3566776667666778999999999999999998888853 5788888765321110000 011122
Q ss_pred ccCCCCCCc-ccc-ccccCHHHHHHHHHHHHHHh-----CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCC
Q 013006 222 WGFGDKAQP-WAS-ELAYSVDLWQDQVCYFIKEV-----IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWG 294 (451)
Q Consensus 222 w~~~~~~~~-~~~-~~~~s~~~~a~dv~~ll~~l-----~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~ 294 (451)
|........ ... .-.-.+...++.+..+++.. ..++++++|+|+||++++.++.++|+++++++.+++...
T Consensus 91 f~~~~~~~~~~~~~~d~~~i~~~~~~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~lp-- 168 (246)
T 4f21_A 91 YDIKSLDANSLNRVVDVEGINSSIAKVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYLP-- 168 (246)
T ss_dssp TTCCCC---CGGGGSCCC-CHHHHHHHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCCCT--
T ss_pred cccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHhCccccccceehhhccC--
Confidence 221111000 000 00123444555555555432 346899999999999999999999999999999987310
Q ss_pred CCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHH
Q 013006 295 FSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFA 374 (451)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (451)
... . +..
T Consensus 169 ----------------------~~~--------------------~-----~~~-------------------------- 175 (246)
T 4f21_A 169 ----------------------AWD--------------------N-----FKG-------------------------- 175 (246)
T ss_dssp ----------------------THH--------------------H-----HST--------------------------
T ss_pred ----------------------ccc--------------------c-----ccc--------------------------
Confidence 000 0 000
Q ss_pred HHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC----CCcEEEeCCCCCCcccc
Q 013006 375 SIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP----EAPYYEISPAGHCPHDE 441 (451)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp----~~~~~~i~~~gH~~~~e 441 (451)
.. .. ...++|++++||++|++||.+.++++.+.+. ++++..+++.||.+..+
T Consensus 176 --------~~--~~-----~~~~~Pvl~~HG~~D~vVp~~~~~~~~~~L~~~g~~v~~~~y~g~gH~i~~~ 231 (246)
T 4f21_A 176 --------KI--TS-----INKGLPILVCHGTDDQVLPEVLGHDLSDKLKVSGFANEYKHYVGMQHSVCME 231 (246)
T ss_dssp --------TC--CG-----GGTTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEESSCCSSCCHH
T ss_pred --------cc--cc-----cccCCchhhcccCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCccCHH
Confidence 00 00 1136799999999999999998888777654 35788999999987644
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=2.5e-15 Score=142.01 Aligned_cols=99 Identities=15% Similarity=0.150 Sum_probs=84.8
Q ss_pred CCCcEEEecCCCCCh-hcHH-HHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccc
Q 013006 158 NSPPVLFLPGFGVGS-FHYE-KQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASE 234 (451)
Q Consensus 158 ~~p~VlllHG~~~~~-~~~~-~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 234 (451)
.+++|||+||++.+. ..|. .+.+.|.+ +|+|+++|+||||.++.
T Consensus 64 ~~~pVVLvHG~~~~~~~~w~~~l~~~L~~~Gy~V~a~DlpG~G~~~~--------------------------------- 110 (316)
T 3icv_A 64 VSKPILLVPGTGTTGPQSFDSNWIPLSAQLGYTPCWISPPPFMLNDT--------------------------------- 110 (316)
T ss_dssp CSSEEEEECCTTCCHHHHHTTTHHHHHHHTTCEEEEECCTTTTCSCH---------------------------------
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHHHCCCeEEEecCCCCCCCcH---------------------------------
Confidence 568999999999987 7898 89999965 79999999999997631
Q ss_pred cccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhC---CCccceEEEeccC
Q 013006 235 LAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACN---PHLVKGVTLLNAT 290 (451)
Q Consensus 235 ~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~---P~~v~~lvl~~~~ 290 (451)
..+.+++++.+..+++.++.++++||||||||.++..++..+ |++|+++|++++.
T Consensus 111 -~~~~~~la~~I~~l~~~~g~~~v~LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp 168 (316)
T 3icv_A 111 -QVNTEYMVNAITTLYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPD 168 (316)
T ss_dssp -HHHHHHHHHHHHHHHHHTTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCC
T ss_pred -HHHHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhccccchhhceEEEECCC
Confidence 135677888888888888999999999999999998777765 5899999999985
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=99.60 E-value=2.5e-15 Score=143.91 Aligned_cols=100 Identities=20% Similarity=0.232 Sum_probs=90.8
Q ss_pred CCCcEEEecCCCCCh------hcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCc
Q 013006 158 NSPPVLFLPGFGVGS------FHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQP 230 (451)
Q Consensus 158 ~~p~VlllHG~~~~~------~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 230 (451)
++++|||+||++++. ..|..+.+.|.+ +|+|+++|+||+|.|..+.
T Consensus 7 ~~~~vVlvHG~~~~~~~~~~~~~w~~l~~~L~~~G~~V~~~d~~g~g~s~~~~--------------------------- 59 (320)
T 1ys1_X 7 TRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDDGPN--------------------------- 59 (320)
T ss_dssp CSSCEEEECCTTCCSEETTTEESSTTHHHHHHHTTCCEEECCCCSSCCSSSTT---------------------------
T ss_pred CCCEEEEECCCCCCccccchHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCC---------------------------
Confidence 578999999999887 789999999965 7999999999999985321
Q ss_pred cccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 231 WASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 231 ~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
.+.+++++++.++++.++.++++||||||||.+++.++.++|++|+++|+++++
T Consensus 60 ------~~~~~l~~~i~~~l~~~~~~~v~lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p 113 (320)
T 1ys1_X 60 ------GRGEQLLAYVKTVLAATGATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTP 113 (320)
T ss_dssp ------SHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred ------CCHHHHHHHHHHHHHHhCCCCEEEEEECHhHHHHHHHHHhChhhceEEEEECCC
Confidence 578999999999999999999999999999999999999999999999999974
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=99.59 E-value=2.1e-14 Score=151.27 Aligned_cols=220 Identities=14% Similarity=0.037 Sum_probs=135.3
Q ss_pred ccceeeecCCeEEEEeecCCC----CCCCCcEEEecCCCCChhc--HHHHH-Hhh-cCCceEEEEcCCCCCCCCCCCCCC
Q 013006 135 TSCFWEWKPKFNVHYEKAGCE----NVNSPPVLFLPGFGVGSFH--YEKQL-KDL-GKDYRAWAIDFLGQGMSLPDEDPT 206 (451)
Q Consensus 135 ~~~~~~~~~g~~l~y~~~g~~----~~~~p~VlllHG~~~~~~~--~~~~~-~~L-~~~~~Vi~~D~rG~G~S~~~~~~~ 206 (451)
....++..||.+|++....|. +.+.|+||++||.+..... |.... ..| .+||.|+++|+||+|.+...-..
T Consensus 450 e~v~~~s~DG~~i~~~l~~P~~~~~~~~~P~vl~~HGG~~~~~~~~~~~~~~q~la~~Gy~Vv~~d~RGsg~~G~~~~~- 528 (711)
T 4hvt_A 450 EQKEATSFDGVKIPYFLVYKKGIKFDGKNPTLLEAYGGFQVINAPYFSRIKNEVWVKNAGVSVLANIRGGGEFGPEWHK- 528 (711)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHTGGGTCEEEEECCTTSSTTCHHHHH-
T ss_pred EEEEEECCCCeEEEEEEEecCCCCCCCCccEEEEECCCCCCCCCCcccHHHHHHHHHCCCEEEEEeCCCCCCcchhHHH-
Confidence 344566679999988766543 2356899999997554432 33333 244 67999999999999876421000
Q ss_pred CCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhC--CCCEEEEEeCcchHHHHHHHHhCCCccceE
Q 013006 207 PRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI--REPVYVVGNSLGGFVAVYFAACNPHLVKGV 284 (451)
Q Consensus 207 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~--~~~v~lvGhS~GG~val~~A~~~P~~v~~l 284 (451)
.. ........++++.+.+..+++.-. .+++.++|+|+||.+++.++.++|++++++
T Consensus 529 ----------~~------------~~~~~~~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f~a~ 586 (711)
T 4hvt_A 529 ----------SA------------QGIKRQTAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPELFGAV 586 (711)
T ss_dssp ----------TT------------SGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEE
T ss_pred ----------hh------------hhccCcCcHHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCceEEE
Confidence 00 000011355666666666655422 267999999999999999999999999999
Q ss_pred EEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhc
Q 013006 285 TLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETT 364 (451)
Q Consensus 285 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (451)
|+..+...+.. ... ..... .... . +... .. .+....+..
T Consensus 587 V~~~pv~D~~~---------~~~-------~~~~~----------------~~~~----~-~G~p-~~-~~~~~~l~~-- 625 (711)
T 4hvt_A 587 ACEVPILDMIR---------YKE-------FGAGH----------------SWVT----E-YGDP-EI-PNDLLHIKK-- 625 (711)
T ss_dssp EEESCCCCTTT---------GGG-------STTGG----------------GGHH----H-HCCT-TS-HHHHHHHHH--
T ss_pred EEeCCccchhh---------hhc-------cccch----------------HHHH----H-hCCC-cC-HHHHHHHHH--
Confidence 99987532100 000 00000 0000 0 1110 00 011111000
Q ss_pred cChhHHHHHHHHHhcCCCCCchhHHhhhccCCCC--CEEEEeeCCCCCCChHHHHHHHHHC-C----CCcEEEeCCCCCC
Q 013006 365 QHPAAAASFASIMFAPQGNLSFREALSRCQMNGV--PICLIYGKEDPWVKPVWGLQVKRQV-P----EAPYYEISPAGHC 437 (451)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~--PvLii~G~~D~~v~~~~~~~l~~~l-p----~~~~~~i~~~gH~ 437 (451)
......+.++++ |+|+++|++|..||+..+.++.+.+ . .+++++++++||.
T Consensus 626 ----------------------~SP~~~v~~i~~~pPvLii~G~~D~~Vp~~~s~~~~~aL~~~~g~pv~l~~~p~~gHg 683 (711)
T 4hvt_A 626 ----------------------YAPLENLSLTQKYPTVLITDSVLDQRVHPWHGRIFEYVLAQNPNTKTYFLESKDSGHG 683 (711)
T ss_dssp ----------------------HCGGGSCCTTSCCCEEEEEEETTCCSSCTHHHHHHHHHHTTCTTCCEEEEEESSCCSS
T ss_pred ----------------------cCHHHHHhhcCCCCCEEEEecCCCCcCChHHHHHHHHHHHHHcCCCEEEEEECCCCCc
Confidence 112233455676 9999999999999999998887777 3 3678899999998
Q ss_pred ccc
Q 013006 438 PHD 440 (451)
Q Consensus 438 ~~~ 440 (451)
...
T Consensus 684 ~~~ 686 (711)
T 4hvt_A 684 SGS 686 (711)
T ss_dssp SCS
T ss_pred CcC
Confidence 654
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=99.58 E-value=8.9e-16 Score=153.80 Aligned_cols=104 Identities=16% Similarity=0.183 Sum_probs=88.8
Q ss_pred CCCCcEEEecCCCCCh-hcHHH-HHHhhcC--CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccc
Q 013006 157 VNSPPVLFLPGFGVGS-FHYEK-QLKDLGK--DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWA 232 (451)
Q Consensus 157 ~~~p~VlllHG~~~~~-~~~~~-~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 232 (451)
+++|+|||+||++++. ..|.. +++.|.+ +|+|+++|+||+|.|..+.
T Consensus 68 ~~~p~vvliHG~~~~~~~~w~~~~~~~l~~~~~~~Vi~~D~~g~G~S~~~~----------------------------- 118 (452)
T 1w52_X 68 SSRKTHFVIHGFRDRGEDSWPSDMCKKILQVETTNCISVDWSSGAKAEYTQ----------------------------- 118 (452)
T ss_dssp TTSCEEEEECCTTCCSSSSHHHHHHHHHHTTSCCEEEEEECHHHHTSCHHH-----------------------------
T ss_pred CCCCEEEEEcCCCCCCCchHHHHHHHHHHhhCCCEEEEEecccccccccHH-----------------------------
Confidence 4679999999999988 78988 7777754 8999999999999985211
Q ss_pred cccccCHHHHHHHHHHHHHHh----C--CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 233 SELAYSVDLWQDQVCYFIKEV----I--REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 233 ~~~~~s~~~~a~dv~~ll~~l----~--~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
...+++.+++|+.++++.+ + .++++||||||||.+|+.+|.++|++|+++|+++|+.
T Consensus 119 --~~~~~~~~~~dl~~~i~~L~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1w52_X 119 --AVQNIRIVGAETAYLIQQLLTELSYNPENVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAE 181 (452)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred --HHHhHHHHHHHHHHHHHHHHHhcCCCcccEEEEEeCHHHHHHHHHHHhcccceeeEEeccccc
Confidence 0146788889999999888 5 6899999999999999999999999999999999864
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=9.4e-16 Score=153.63 Aligned_cols=104 Identities=14% Similarity=0.156 Sum_probs=88.7
Q ss_pred CCCCcEEEecCCCCCh-hcHHH-HHHhhcC--CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccc
Q 013006 157 VNSPPVLFLPGFGVGS-FHYEK-QLKDLGK--DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWA 232 (451)
Q Consensus 157 ~~~p~VlllHG~~~~~-~~~~~-~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 232 (451)
+++|+|||+||++++. ..|.. +++.|.+ +|+|+++|+||+|.|..+.
T Consensus 68 ~~~p~vvliHG~~~~~~~~w~~~l~~~l~~~~~~~Vi~~D~~G~G~S~~~~----------------------------- 118 (452)
T 1bu8_A 68 LDRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRTEYTQ----------------------------- 118 (452)
T ss_dssp TTSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHHSSCHHH-----------------------------
T ss_pred CCCCeEEEECCCCCCCCchHHHHHHHHHHhhCCCEEEEEechhcccCchhH-----------------------------
Confidence 4678999999999988 78988 5677743 8999999999999985211
Q ss_pred cccccCHHHHHHHHHHHHHHh----CC--CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 233 SELAYSVDLWQDQVCYFIKEV----IR--EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 233 ~~~~~s~~~~a~dv~~ll~~l----~~--~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
...+++.+++|+.++++.+ ++ ++++||||||||.+|+.+|.++|++|+++|+++|+.
T Consensus 119 --~~~~~~~~~~dl~~li~~L~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1bu8_A 119 --ASYNTRVVGAEIAFLVQVLSTEMGYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAE 181 (452)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred --hHhhHHHHHHHHHHHHHHHHHhcCCCccceEEEEEChhHHHHHHHHHhcccccceEEEecCCc
Confidence 1256778899999999988 54 899999999999999999999999999999999864
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=99.57 E-value=3.8e-15 Score=140.64 Aligned_cols=97 Identities=19% Similarity=0.163 Sum_probs=88.4
Q ss_pred CCCcEEEecCCCCChh-----cHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcc
Q 013006 158 NSPPVLFLPGFGVGSF-----HYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPW 231 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~-----~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 231 (451)
++++|||+||++++.. .|..+.+.|.+ +|+|+++|+||+|.|.
T Consensus 6 ~~~~vvlvHG~~~~~~~~~~~~~~~~~~~L~~~G~~v~~~d~~g~g~s~------------------------------- 54 (285)
T 1ex9_A 6 TKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSE------------------------------- 54 (285)
T ss_dssp CSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHH-------------------------------
T ss_pred CCCeEEEeCCCCCCccccccccHHHHHHHHHhCCCEEEEEeCCCCCCch-------------------------------
Confidence 5789999999988754 89999999954 6999999999999874
Q ss_pred ccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 232 ASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 232 ~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
.+.+++++++..+++.++.++++||||||||.+++.++.++|++|+++|+++++
T Consensus 55 -----~~~~~~~~~i~~~~~~~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lv~i~~p 108 (285)
T 1ex9_A 55 -----VRGEQLLQQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAP 108 (285)
T ss_dssp -----HHHHHHHHHHHHHHHHHCCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred -----hhHHHHHHHHHHHHHHhCCCCEEEEEECHhHHHHHHHHHhChhheeEEEEECCC
Confidence 578999999999999999999999999999999999999999999999999984
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=3.8e-14 Score=132.19 Aligned_cols=118 Identities=12% Similarity=0.032 Sum_probs=83.6
Q ss_pred cCCeEEEEeecCCCC----CCCCcEEEecCCCCChhcHHH-------HHHhhcC-----CceEEEEcCCCCCCCCCCCCC
Q 013006 142 KPKFNVHYEKAGCEN----VNSPPVLFLPGFGVGSFHYEK-------QLKDLGK-----DYRAWAIDFLGQGMSLPDEDP 205 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~----~~~p~VlllHG~~~~~~~~~~-------~~~~L~~-----~~~Vi~~D~rG~G~S~~~~~~ 205 (451)
.+|..+.+..+-|.+ ...|+||++||++++...|.. +++.|.+ ++.|+++|.++++.+...
T Consensus 41 ~~~~~~~~~v~~P~~~~~~~~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~~~~~~~~~--- 117 (268)
T 1jjf_A 41 ATNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAGPGIAD--- 117 (268)
T ss_dssp TTTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCCCTTCSC---
T ss_pred ccCCceEEEEEeCCCCCCCCCccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCCCCCEEEEEeCCCCCCccccc---
Confidence 357777777665532 345899999999987766644 3566632 599999999998754210
Q ss_pred CCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHH-hCC----CCEEEEEeCcchHHHHHHHHhCCCc
Q 013006 206 TPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKE-VIR----EPVYVVGNSLGGFVAVYFAACNPHL 280 (451)
Q Consensus 206 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~-l~~----~~v~lvGhS~GG~val~~A~~~P~~ 280 (451)
.+ ....+++++++..+++. +.. ++++|+||||||.+++.++.++|++
T Consensus 118 ------------------------~~----~~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~ 169 (268)
T 1jjf_A 118 ------------------------GY----ENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDK 169 (268)
T ss_dssp ------------------------HH----HHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTT
T ss_pred ------------------------cH----HHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCchh
Confidence 00 01123345566666653 343 6899999999999999999999999
Q ss_pred cceEEEeccC
Q 013006 281 VKGVTLLNAT 290 (451)
Q Consensus 281 v~~lvl~~~~ 290 (451)
+++++++++.
T Consensus 170 ~~~~v~~s~~ 179 (268)
T 1jjf_A 170 FAYIGPISAA 179 (268)
T ss_dssp CSEEEEESCC
T ss_pred hhheEEeCCC
Confidence 9999999985
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=99.56 E-value=1.6e-15 Score=151.29 Aligned_cols=105 Identities=14% Similarity=0.162 Sum_probs=86.7
Q ss_pred CCCCcEEEecCCCCCh-hcHHH-HHHhh--cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccc
Q 013006 157 VNSPPVLFLPGFGVGS-FHYEK-QLKDL--GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWA 232 (451)
Q Consensus 157 ~~~p~VlllHG~~~~~-~~~~~-~~~~L--~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 232 (451)
+.+|+|||+||++++. ..|.. +++.| ..+|+|+++|+||+|.|..+.
T Consensus 67 ~~~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~----------------------------- 117 (449)
T 1hpl_A 67 TGRKTRFIIHGFIDKGEESWLSTMCQNMFKVESVNCICVDWKSGSRTAYSQ----------------------------- 117 (449)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHHHHHHHHHCCEEEEEEECHHHHSSCHHH-----------------------------
T ss_pred CCCCeEEEEecCCCCCCccHHHHHHHHHHhcCCeEEEEEeCCcccCCccHH-----------------------------
Confidence 4578999999999885 57987 56666 457999999999999984211
Q ss_pred cccccCHHHHHHHHHHHHHHh------CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCC
Q 013006 233 SELAYSVDLWQDQVCYFIKEV------IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPF 292 (451)
Q Consensus 233 ~~~~~s~~~~a~dv~~ll~~l------~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~ 292 (451)
..++++.+++++.++++.+ +.++++||||||||.+|+.+|.++|++|+++++++|+.+
T Consensus 118 --~~~~~~~v~~~la~ll~~L~~~~g~~~~~v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa~p 181 (449)
T 1hpl_A 118 --ASQNVRIVGAEVAYLVGVLQSSFDYSPSNVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPAEP 181 (449)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred --HHHHHHHHHHHHHHHHHHHHHhcCCCcccEEEEEECHhHHHHHHHHHhcchhcceeeccCcccc
Confidence 0156777888888888876 368999999999999999999999999999999998643
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=99.54 E-value=5.2e-15 Score=142.44 Aligned_cols=108 Identities=14% Similarity=0.140 Sum_probs=89.8
Q ss_pred CCCCcEEEecCCCC----------ChhcH----HHHHHhhcC-Cce---EEEEcCCCCCCCCCCCCCCCCCCCCCchhhh
Q 013006 157 VNSPPVLFLPGFGV----------GSFHY----EKQLKDLGK-DYR---AWAIDFLGQGMSLPDEDPTPRSKEGDSTEEK 218 (451)
Q Consensus 157 ~~~p~VlllHG~~~----------~~~~~----~~~~~~L~~-~~~---Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~ 218 (451)
..+++|||+||++. +...| ..+++.|.+ +|+ |+++|++|+|.|..+....
T Consensus 38 ~~~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~~~Gy~~~~V~~~D~~g~G~S~~~~~~~------------ 105 (342)
T 2x5x_A 38 ATKTPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKARGYNDCEIFGVTYLSSSEQGSAQYNY------------ 105 (342)
T ss_dssp CCSCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHHHTTCCTTSEEEECCSCHHHHTCGGGCC------------
T ss_pred CCCCeEEEECCcCCCcccccccccccccccccHHHHHHHHHhCCCCCCeEEEEeCCCCCccCCccccC------------
Confidence 35688999999998 45678 888888855 787 9999999999885331000
Q ss_pred hccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhC--CCccceEEEeccCC
Q 013006 219 NFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACN--PHLVKGVTLLNATP 291 (451)
Q Consensus 219 ~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~--P~~v~~lvl~~~~~ 291 (451)
...+..+++++++..++++++.++++||||||||.+++.++.++ |++|+++|+++++.
T Consensus 106 ---------------~~~~~~~~l~~~I~~l~~~~g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~ 165 (342)
T 2x5x_A 106 ---------------HSSTKYAIIKTFIDKVKAYTGKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGI 165 (342)
T ss_dssp ---------------BCHHHHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCT
T ss_pred ---------------CHHHHHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCc
Confidence 01257888999999999999999999999999999999999998 99999999999864
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=99.52 E-value=5.5e-15 Score=147.43 Aligned_cols=104 Identities=17% Similarity=0.191 Sum_probs=85.4
Q ss_pred CCCCcEEEecCCCCChh-cHHH-HHHhh-cC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccc
Q 013006 157 VNSPPVLFLPGFGVGSF-HYEK-QLKDL-GK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWA 232 (451)
Q Consensus 157 ~~~p~VlllHG~~~~~~-~~~~-~~~~L-~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 232 (451)
+++|+|||+||++++.. .|.. +.+.| .+ +|+||++|+||+|.|..+.
T Consensus 68 ~~~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~----------------------------- 118 (450)
T 1rp1_A 68 TDKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGSQTSYTQ----------------------------- 118 (450)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHHSSCHHH-----------------------------
T ss_pred CCCCeEEEEccCCCCCCcchHHHHHHHHHhcCCeEEEEEeCccccCCcchH-----------------------------
Confidence 35789999999998865 7977 45555 43 7999999999999874211
Q ss_pred cccccCHHHHHHHHHHHHHHh------CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCC
Q 013006 233 SELAYSVDLWQDQVCYFIKEV------IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPF 292 (451)
Q Consensus 233 ~~~~~s~~~~a~dv~~ll~~l------~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~ 292 (451)
..++++.+++++.++++.+ +.++++||||||||.+|+.+|.++|+ |+++++++|+.+
T Consensus 119 --~~~~~~~~a~~l~~ll~~L~~~~g~~~~~v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa~p 181 (450)
T 1rp1_A 119 --AANNVRVVGAQVAQMLSMLSANYSYSPSQVQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPVEA 181 (450)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTSTT-CCEEEEESCCCT
T ss_pred --HHHHHHHHHHHHHHHHHHHHHhcCCChhhEEEEEECHhHHHHHHHHHhcCC-cccccccCcccc
Confidence 0257788899999999877 36899999999999999999999999 999999998653
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.51 E-value=1.3e-13 Score=134.97 Aligned_cols=110 Identities=19% Similarity=0.126 Sum_probs=73.8
Q ss_pred CCCcEEEecCCCCChh---------cHHHHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCC
Q 013006 158 NSPPVLFLPGFGVGSF---------HYEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDK 227 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~---------~~~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~ 227 (451)
..|.|++.||...... .|......+ .+||.|+++|+||+|.|.....+...
T Consensus 73 ~~PvV~~~HG~~~~~~~~ps~~~~~~~~~~~~lal~~Gy~Vv~~D~rG~G~s~~~~~~~~~------------------- 133 (377)
T 4ezi_A 73 QVGIISYQHGTRFERNDVPSRNNEKNYIYLAAYGNSAGYMTVMPDYLGLGDNELTLHPYVQ------------------- 133 (377)
T ss_dssp CEEEEEEECCCCCSTTCSGGGCCGGGHHHHHHHTTTTCCEEEEECCTTSTTCCCSSCCTTC-------------------
T ss_pred CCcEEEEeCCCcCCcccCCCcCcccchHHHHHHHHhCCcEEEEeCCCCCCCCCCCCccccc-------------------
Confidence 4578999999974322 122222233 67899999999999999742211100
Q ss_pred CCccccccccCHHHHHHHHHHHHHHhCC---CCEEEEEeCcchHHHHHHHHhCCC-----ccceEEEeccC
Q 013006 228 AQPWASELAYSVDLWQDQVCYFIKEVIR---EPVYVVGNSLGGFVAVYFAACNPH-----LVKGVTLLNAT 290 (451)
Q Consensus 228 ~~~~~~~~~~s~~~~a~dv~~ll~~l~~---~~v~lvGhS~GG~val~~A~~~P~-----~v~~lvl~~~~ 290 (451)
.....+++.+.++++..+++.+++ ++++++||||||.+++.+|..+|+ .+.+++..++.
T Consensus 134 ----~~~~~~~~~D~~~a~~~~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~~~~~p 200 (377)
T 4ezi_A 134 ----AETLASSSIDMLFAAKELANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVAPGSAP 200 (377)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEEEESCC
T ss_pred ----chhHHHHHHHHHHHHHHHhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEEecCcc
Confidence 000013455556666667777665 789999999999999999988654 47788887764
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.47 E-value=9.6e-13 Score=123.77 Aligned_cols=124 Identities=10% Similarity=0.014 Sum_probs=85.5
Q ss_pred Cccceeee-cCCeEEEEeecCCCCCCCCcEEEecCCC--CChhcHHH---HHHhhcC-CceEEEEcCCCCC-CCCCCCCC
Q 013006 134 ITSCFWEW-KPKFNVHYEKAGCENVNSPPVLFLPGFG--VGSFHYEK---QLKDLGK-DYRAWAIDFLGQG-MSLPDEDP 205 (451)
Q Consensus 134 ~~~~~~~~-~~g~~l~y~~~g~~~~~~p~VlllHG~~--~~~~~~~~---~~~~L~~-~~~Vi~~D~rG~G-~S~~~~~~ 205 (451)
+....+.. ..|.++.+. .-|.+ .|+|||+||++ .+...|.. +...+.+ ++.|+++|.++.+ .+... .+
T Consensus 11 ~~~~~~~S~~~~~~~~~~-~~P~~--~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~pd~~~~~~~~~~~-~~ 86 (280)
T 1r88_A 11 YENLMVPSPSMGRDIPVA-FLAGG--PHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWE-QD 86 (280)
T ss_dssp CEEEEEEETTTTEEEEEE-EECCS--SSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTSTTSBCS-SC
T ss_pred EEEEEEECcccCCcceEE-EeCCC--CCEEEEECCCCCCCChhhhhhcccHHHHHhcCCeEEEEECCCCCCccCCCC-CC
Confidence 33334433 357777766 33332 37999999994 46667875 3455544 6999999996542 11100 00
Q ss_pred CCCCCCCCchhhhhccccCCCCCCccccccccCH-HHHHHHHHHHHHH-hCCC--CEEEEEeCcchHHHHHHHHhCCCcc
Q 013006 206 TPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSV-DLWQDQVCYFIKE-VIRE--PVYVVGNSLGGFVAVYFAACNPHLV 281 (451)
Q Consensus 206 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~-~~~a~dv~~ll~~-l~~~--~v~lvGhS~GG~val~~A~~~P~~v 281 (451)
. .... +.+++++..++++ ++++ +++|+||||||.+|+.+|.++|+++
T Consensus 87 ~-----------------------------~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~ 137 (280)
T 1r88_A 87 G-----------------------------SKQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRF 137 (280)
T ss_dssp T-----------------------------TCBHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTE
T ss_pred C-----------------------------CCcHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccce
Confidence 0 0122 4456788888887 6764 8999999999999999999999999
Q ss_pred ceEEEeccC
Q 013006 282 KGVTLLNAT 290 (451)
Q Consensus 282 ~~lvl~~~~ 290 (451)
++++++++.
T Consensus 138 ~~~v~~sg~ 146 (280)
T 1r88_A 138 GFAGSMSGF 146 (280)
T ss_dssp EEEEEESCC
T ss_pred eEEEEECCc
Confidence 999999985
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=99.46 E-value=1.1e-13 Score=143.63 Aligned_cols=122 Identities=11% Similarity=-0.051 Sum_probs=90.1
Q ss_pred cceeeecCCeEEEEeecCCCC-CCCCcEEEecCCCCChhcHHHH---H-Hhh-cCCceEEEEcCCCCCCCCCCCCCCCCC
Q 013006 136 SCFWEWKPKFNVHYEKAGCEN-VNSPPVLFLPGFGVGSFHYEKQ---L-KDL-GKDYRAWAIDFLGQGMSLPDEDPTPRS 209 (451)
Q Consensus 136 ~~~~~~~~g~~l~y~~~g~~~-~~~p~VlllHG~~~~~~~~~~~---~-~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~ 209 (451)
...++..||.+|++..+.|.+ .+.|+||+.||++.....+... . ..| .+||.|+++|+||+|.|......
T Consensus 11 ~v~i~~~DG~~L~~~~~~P~~~~~~P~vv~~~~~g~~~~~~~~y~~~~~~~la~~Gy~vv~~D~RG~G~S~g~~~~---- 86 (587)
T 3i2k_A 11 NVMVPMRDGVRLAVDLYRPDADGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEFVP---- 86 (587)
T ss_dssp EEEEECTTSCEEEEEEEEECCSSCEEEEEEEESSCTTCHHHHHTTTCCTHHHHHTTCEEEEEECTTSTTCCSCCCT----
T ss_pred EEEEECCCCCEEEEEEEECCCCCCeeEEEEECCcCCCccccccchhhHHHHHHHCCCEEEEEcCCCCCCCCCcccc----
Confidence 345677899999998776543 2347888889988775544322 2 455 56899999999999999743211
Q ss_pred CCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhC-----CCCEEEEEeCcchHHHHHHHHhCCCccceE
Q 013006 210 KEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI-----REPVYVVGNSLGGFVAVYFAACNPHLVKGV 284 (451)
Q Consensus 210 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~-----~~~v~lvGhS~GG~val~~A~~~P~~v~~l 284 (451)
+...++|+.++++.+. ..++.++|+||||++++.+|+.+|+.++++
T Consensus 87 -----------------------------~~~~~~D~~~~i~~l~~~~~~~~~v~l~G~S~GG~~a~~~a~~~~~~l~a~ 137 (587)
T 3i2k_A 87 -----------------------------HVDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAI 137 (587)
T ss_dssp -----------------------------TTTHHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEB
T ss_pred -----------------------------ccchhHHHHHHHHHHHhCCCCCCeEEEEeeCHHHHHHHHHHhhCCCccEEE
Confidence 1223556666665553 258999999999999999999999999999
Q ss_pred EEeccC
Q 013006 285 TLLNAT 290 (451)
Q Consensus 285 vl~~~~ 290 (451)
|++++.
T Consensus 138 v~~~~~ 143 (587)
T 3i2k_A 138 APSMAS 143 (587)
T ss_dssp CEESCC
T ss_pred EEeCCc
Confidence 999875
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.44 E-value=3.8e-13 Score=133.73 Aligned_cols=111 Identities=23% Similarity=0.279 Sum_probs=82.5
Q ss_pred CCcEEEecCCCCChhcHH---HHHHhhcC--CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccc
Q 013006 159 SPPVLFLPGFGVGSFHYE---KQLKDLGK--DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWAS 233 (451)
Q Consensus 159 ~p~VlllHG~~~~~~~~~---~~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 233 (451)
+.||||+||..++...+. .....|++ ++.|+++|+||||.|.+...... . ....++
T Consensus 38 g~Pi~l~~Ggeg~~~~~~~~~g~~~~lA~~~~~~Vi~~DhRg~G~S~p~~~~~~-~--------~~~~l~---------- 98 (446)
T 3n2z_B 38 GGSILFYTGNEGDIIWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPFGDNSF-K--------DSRHLN---------- 98 (446)
T ss_dssp TCEEEEEECCSSCHHHHHHHCHHHHHHHHHHTEEEEEECCTTSTTCCTTGGGGG-S--------CTTTST----------
T ss_pred CCCEEEEeCCCCcchhhhhcccHHHHHHHHhCCcEEEEecCCCCCCCCCCcccc-c--------cchhhc----------
Confidence 457899999887765432 23445544 57999999999999975321100 0 000111
Q ss_pred ccccCHHHHHHHHHHHHHHhCC-------CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 234 ELAYSVDLWQDQVCYFIKEVIR-------EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 234 ~~~~s~~~~a~dv~~ll~~l~~-------~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
..+.+++++|+..+++++.. .|++++||||||++|+.++.++|++|.++|+.+++
T Consensus 99 --~lt~~q~~~Dl~~~~~~l~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssap 160 (446)
T 3n2z_B 99 --FLTSEQALADFAELIKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAP 160 (446)
T ss_dssp --TCSHHHHHHHHHHHHHHHHHHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCC
T ss_pred --cCCHHHHHHHHHHHHHHHHHhcccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEeccc
Confidence 15899999999999998864 38999999999999999999999999999998764
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.44 E-value=1.2e-12 Score=124.53 Aligned_cols=134 Identities=12% Similarity=0.023 Sum_probs=87.3
Q ss_pred Cccceeeec-CCeEEEEeecCCCCCCCCcEEEecCC--CCChhcHHHH---HHhhcC-CceEEEEcCCCC-CCCCCCCCC
Q 013006 134 ITSCFWEWK-PKFNVHYEKAGCENVNSPPVLFLPGF--GVGSFHYEKQ---LKDLGK-DYRAWAIDFLGQ-GMSLPDEDP 205 (451)
Q Consensus 134 ~~~~~~~~~-~g~~l~y~~~g~~~~~~p~VlllHG~--~~~~~~~~~~---~~~L~~-~~~Vi~~D~rG~-G~S~~~~~~ 205 (451)
+....+... .|.++.+.. -+..+..|+|+|+||+ +.+...|... ...+.+ ++.|+++|.++. +.++... +
T Consensus 9 v~~~~~~S~~~~~~i~v~~-~p~~~~~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~p~~~~~~~~~~~~~-~ 86 (304)
T 1sfr_A 9 VEYLQVPSPSMGRDIKVQF-QSGGANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYSDWYQ-P 86 (304)
T ss_dssp CEEEEEEETTTTEEEEEEE-ECCSTTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTTCBCSS-C
T ss_pred EEEEEEECccCCCceEEEE-CCCCCCCCEEEEeCCCCCCCCcchhhcCCCHHHHHhcCCeEEEEECCCCCccccccCC-c
Confidence 333333333 356666663 2222356899999999 5677778764 244544 699999998764 2221100 0
Q ss_pred CCCCCCCCchhhhhccccCCCCCCccccccccCHHHH-HHHHHHHHHH-hCCC--CEEEEEeCcchHHHHHHHHhCCCcc
Q 013006 206 TPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLW-QDQVCYFIKE-VIRE--PVYVVGNSLGGFVAVYFAACNPHLV 281 (451)
Q Consensus 206 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~-a~dv~~ll~~-l~~~--~v~lvGhS~GG~val~~A~~~P~~v 281 (451)
. ...+. ...+.++++ ++++..++++ ++++ +++|+||||||.+|+.+|.++|+++
T Consensus 87 ~---------------~~~g~-------~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~ 144 (304)
T 1sfr_A 87 A---------------CGKAG-------CQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQF 144 (304)
T ss_dssp E---------------EETTE-------EECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTE
T ss_pred c---------------ccccc-------cccccHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccce
Confidence 0 00000 001455554 4788888877 6654 8999999999999999999999999
Q ss_pred ceEEEeccCC
Q 013006 282 KGVTLLNATP 291 (451)
Q Consensus 282 ~~lvl~~~~~ 291 (451)
++++++++..
T Consensus 145 ~~~v~~sg~~ 154 (304)
T 1sfr_A 145 VYAGAMSGLL 154 (304)
T ss_dssp EEEEEESCCS
T ss_pred eEEEEECCcc
Confidence 9999999853
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=1.2e-12 Score=123.04 Aligned_cols=123 Identities=13% Similarity=0.058 Sum_probs=84.4
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCC--CChhcHHHHH---HhhcC-CceEEEEcCCCC-CCCCCCCCCCCCCCCCCch
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFG--VGSFHYEKQL---KDLGK-DYRAWAIDFLGQ-GMSLPDEDPTPRSKEGDST 215 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~--~~~~~~~~~~---~~L~~-~~~Vi~~D~rG~-G~S~~~~~~~~~~~~~~~~ 215 (451)
.|.++.+...... +++|+|+||++ .+...|..+. ..|.+ ++.|+++|.+|. +.+.... +..
T Consensus 16 ~~~~~~v~~~p~~---~~~v~llHG~~~~~~~~~w~~~~~~~~~l~~~~~~vv~pd~~~~~~~~~~~~-~~~-------- 83 (280)
T 1dqz_A 16 MGRDIKVQFQGGG---PHAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQ-PSQ-------- 83 (280)
T ss_dssp TTEEEEEEEECCS---SSEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTCTTSBCSS-SCT--------
T ss_pred cCceeEEEEcCCC---CCEEEEECCCCCCCCcccccccCcHHHHHhcCCeEEEEECCCCCccccCCCC-CCc--------
Confidence 4667776654321 36899999995 4777887653 44544 699999998753 2221110 000
Q ss_pred hhhhccccCCCCCCccccccccCHHHH-HHHHHHHHHH-hCCC--CEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 216 EEKNFLWGFGDKAQPWASELAYSVDLW-QDQVCYFIKE-VIRE--PVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 216 ~~~~~~w~~~~~~~~~~~~~~~s~~~~-a~dv~~ll~~-l~~~--~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
.++. ...++++++ ++++..++++ ++++ +++|+||||||.+|+.+|.++|+++++++++++..
T Consensus 84 -------~~g~-------~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~ 149 (280)
T 1dqz_A 84 -------SNGQ-------NYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFL 149 (280)
T ss_dssp -------TTTC-------CSCCBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCC
T ss_pred -------cccc-------cccccHHHHHHHHHHHHHHHHcCCCCCceEEEEECHHHHHHHHHHHhCCchheEEEEecCcc
Confidence 0000 001455554 5888888887 7764 89999999999999999999999999999999853
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.43 E-value=4.8e-13 Score=139.68 Aligned_cols=138 Identities=17% Similarity=0.051 Sum_probs=88.6
Q ss_pred cceeeecCCeEEEEeecCCCC-CCCCcEEEecCCCCCh-------hcHHHHH----Hhh-cCCceEEEEcCCCCCCCCCC
Q 013006 136 SCFWEWKPKFNVHYEKAGCEN-VNSPPVLFLPGFGVGS-------FHYEKQL----KDL-GKDYRAWAIDFLGQGMSLPD 202 (451)
Q Consensus 136 ~~~~~~~~g~~l~y~~~g~~~-~~~p~VlllHG~~~~~-------~~~~~~~----~~L-~~~~~Vi~~D~rG~G~S~~~ 202 (451)
...++..||.+|++..+.|.+ ...|+||++||++... ..|...+ ..| ++||.|+++|+||+|.|...
T Consensus 27 ~v~i~~~DG~~L~~~~~~P~~~~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D~RG~g~S~g~ 106 (615)
T 1mpx_A 27 EVMIPMRDGVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEGD 106 (615)
T ss_dssp EEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCSC
T ss_pred EEEEECCCCCEEEEEEEeCCCCCCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEECCCCCCCCCCc
Confidence 445667799999998876643 2347788889988753 2344322 455 56899999999999999743
Q ss_pred CCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhCCCc
Q 013006 203 EDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACNPHL 280 (451)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~P~~ 280 (451)
........ ++...|+. ...+|..+.+..+.+.... .++.++||||||++++.+|..+|++
T Consensus 107 ~~~~~~~~------~~~~~~g~------------~~~~D~~~~i~~l~~~~~~~~~rv~l~G~S~GG~~al~~a~~~~~~ 168 (615)
T 1mpx_A 107 YVMTRPLR------GPLNPSEV------------DHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPA 168 (615)
T ss_dssp CCTTCCCS------BTTBCSSC------------CHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTT
T ss_pred cccccccc------cccccccc------------cHHHHHHHHHHHHHhcCCCCCCeEEEEecCHHHHHHHHHhhcCCCc
Confidence 22100000 00000000 1233333333333332122 4899999999999999999999999
Q ss_pred cceEEEeccCC
Q 013006 281 VKGVTLLNATP 291 (451)
Q Consensus 281 v~~lvl~~~~~ 291 (451)
++++|.+++..
T Consensus 169 l~a~v~~~~~~ 179 (615)
T 1mpx_A 169 LKVAVPESPMI 179 (615)
T ss_dssp EEEEEEESCCC
T ss_pred eEEEEecCCcc
Confidence 99999999864
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.42 E-value=6.9e-13 Score=126.99 Aligned_cols=95 Identities=15% Similarity=0.187 Sum_probs=80.4
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAY 237 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 237 (451)
++++|+++||++++...|..+...|. ++|+++|+|+ ..+ ..
T Consensus 45 ~~~~l~~~hg~~g~~~~~~~~~~~l~--~~v~~~~~~~----~~~---------------------------------~~ 85 (316)
T 2px6_A 45 SERPLFLVHPIEGSTTVFHSLASRLS--IPTYGLQCTR----AAP---------------------------------LD 85 (316)
T ss_dssp SSCCEEEECCTTCCSGGGHHHHHHCS--SCEEEECCCT----TSC---------------------------------TT
T ss_pred CCCeEEEECCCCCCHHHHHHHHHhcC--CCEEEEECCC----CCC---------------------------------cC
Confidence 46899999999999999999999996 9999999992 111 15
Q ss_pred CHHHHHHHHHHHHHHhCC-CCEEEEEeCcchHHHHHHHHhCC---Cc---cceEEEeccCC
Q 013006 238 SVDLWQDQVCYFIKEVIR-EPVYVVGNSLGGFVAVYFAACNP---HL---VKGVTLLNATP 291 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l~~-~~v~lvGhS~GG~val~~A~~~P---~~---v~~lvl~~~~~ 291 (451)
+++++++++.+.++.+.. ++++++||||||.+|+.+|.+.+ +. +++++++++.+
T Consensus 86 ~~~~~a~~~~~~i~~~~~~~~~~l~G~S~Gg~va~~~a~~l~~~g~~~p~v~~l~li~~~~ 146 (316)
T 2px6_A 86 SIHSLAAYYIDCIRQVQPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSP 146 (316)
T ss_dssp CHHHHHHHHHHHHTTTCSSCCCEEEEETHHHHHHHHHHHHHHHHC---CCCCEEEEESCSS
T ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHHHHHHcCCcccccceEEEEcCCc
Confidence 899999999999988864 78999999999999999998764 45 89999999864
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=99.34 E-value=4.2e-14 Score=139.85 Aligned_cols=121 Identities=16% Similarity=0.194 Sum_probs=81.1
Q ss_pred CCCcEEEecCCCCC--------hhcHH----HHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccC
Q 013006 158 NSPPVLFLPGFGVG--------SFHYE----KQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGF 224 (451)
Q Consensus 158 ~~p~VlllHG~~~~--------~~~~~----~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~ 224 (451)
.+++|||+||++++ ...|. .+++.|. ++|+|+++|+||+|.|....... ......+.
T Consensus 51 ~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G~G~S~~~~~~l----------~~~i~~g~ 120 (431)
T 2hih_A 51 NKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSALASNHERAVEL----------YYYLKGGR 120 (431)
T ss_dssp CSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCSSSCHHHHHHHH----------HHHHHCEE
T ss_pred CCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCCCCCCccchHHh----------hhhhhhcc
Confidence 56899999999764 34574 5888885 57999999999999884210000 00000000
Q ss_pred CCCCCccccccccCHHHHHHHHHHHHHHhCC-CCEEEEEeCcchHHHHHHHHh--------------------------C
Q 013006 225 GDKAQPWASELAYSVDLWQDQVCYFIKEVIR-EPVYVVGNSLGGFVAVYFAAC--------------------------N 277 (451)
Q Consensus 225 ~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~-~~v~lvGhS~GG~val~~A~~--------------------------~ 277 (451)
++.... ....++++++++|+.+++++++. ++++||||||||.+++.+|.. +
T Consensus 121 g~sg~~--~~~~~~~~~~a~dl~~ll~~l~~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~ 198 (431)
T 2hih_A 121 VDYGAA--HSEKYGHERYGKTYEGVLKDWKPGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQ 198 (431)
T ss_dssp EECCHH--HHHHHTCCSEEEEECCSCTTCBTTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCC
T ss_pred cccccc--ccccCCHHHHHHHHHHHHHHhCCCCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCc
Confidence 000000 00013444555666677777764 899999999999999999876 7
Q ss_pred CCccceEEEeccC
Q 013006 278 PHLVKGVTLLNAT 290 (451)
Q Consensus 278 P~~v~~lvl~~~~ 290 (451)
|++|+++|+++++
T Consensus 199 p~~V~slv~i~tP 211 (431)
T 2hih_A 199 DNMVTSITTIATP 211 (431)
T ss_dssp CSCEEEEEEESCC
T ss_pred ccceeEEEEECCC
Confidence 8999999999975
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=3.1e-11 Score=123.84 Aligned_cols=124 Identities=14% Similarity=0.044 Sum_probs=90.2
Q ss_pred cceeeecCCeEEEEeecCCCC-CCCCcEEEecCCCCChh-cHH----------------------HHHHhh-cCCceEEE
Q 013006 136 SCFWEWKPKFNVHYEKAGCEN-VNSPPVLFLPGFGVGSF-HYE----------------------KQLKDL-GKDYRAWA 190 (451)
Q Consensus 136 ~~~~~~~~g~~l~y~~~g~~~-~~~p~VlllHG~~~~~~-~~~----------------------~~~~~L-~~~~~Vi~ 190 (451)
...++.+||++|+...+-|.+ .+.|+||+.||++.... .+. .....| .+||.|++
T Consensus 43 ~v~i~~~DG~~L~a~l~~P~~~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~Gy~vv~ 122 (560)
T 3iii_A 43 DGTVEMRDGEKLYINIFRPNKDGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWVPNDYVVVK 122 (560)
T ss_dssp EEEEECTTSCEEEEEEEECSSSSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHGGGTCEEEE
T ss_pred EEEEECCCCcEEEEEEEecCCCCCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHHHhCCCEEEE
Confidence 445667899999998776643 23588999999987631 110 124456 45899999
Q ss_pred EcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCC-----CCEEEEEeCc
Q 013006 191 IDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR-----EPVYVVGNSL 265 (451)
Q Consensus 191 ~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~-----~~v~lvGhS~ 265 (451)
+|+||+|.|+..... +. ....+|+.++++.+.. .++.++|||+
T Consensus 123 ~D~RG~G~S~G~~~~-------------------------------~~-~~~~~D~~~~i~~l~~~~~~~~~igl~G~S~ 170 (560)
T 3iii_A 123 VALRGSDKSKGVLSP-------------------------------WS-KREAEDYYEVIEWAANQSWSNGNIGTNGVSY 170 (560)
T ss_dssp EECTTSTTCCSCBCT-------------------------------TS-HHHHHHHHHHHHHHHTSTTEEEEEEEEEETH
T ss_pred EcCCCCCCCCCcccc-------------------------------CC-hhHHHHHHHHHHHHHhCCCCCCcEEEEccCH
Confidence 999999999743210 11 2445666666665532 4799999999
Q ss_pred chHHHHHHHHhCCCccceEEEeccCC
Q 013006 266 GGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 266 GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
||.+++.+|+.+|+.++++|..++..
T Consensus 171 GG~~al~~a~~~p~~l~aiv~~~~~~ 196 (560)
T 3iii_A 171 LAVTQWWVASLNPPHLKAMIPWEGLN 196 (560)
T ss_dssp HHHHHHHHHTTCCTTEEEEEEESCCC
T ss_pred HHHHHHHHHhcCCCceEEEEecCCcc
Confidence 99999999999999999999998753
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=99.30 E-value=5.1e-12 Score=123.22 Aligned_cols=98 Identities=19% Similarity=0.238 Sum_probs=71.6
Q ss_pred CCCcEEEecCCCCCh-------hcHHHH----HHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCC
Q 013006 158 NSPPVLFLPGFGVGS-------FHYEKQ----LKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFG 225 (451)
Q Consensus 158 ~~p~VlllHG~~~~~-------~~~~~~----~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~ 225 (451)
+++||||+||++++. ..|..+ .+.|. ++|+|+++|+||+|.|..
T Consensus 5 ~~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g~G~s~~------------------------ 60 (387)
T 2dsn_A 5 NDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLSSNWD------------------------ 60 (387)
T ss_dssp CCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCSSBCHHH------------------------
T ss_pred CCCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCCCCCccc------------------------
Confidence 568999999998764 247644 48885 579999999999998731
Q ss_pred CCCCccccccccCHHHHHHHHH------------------------HHHHH-hCCCCEEEEEeCcchHHHHHHHHh----
Q 013006 226 DKAQPWASELAYSVDLWQDQVC------------------------YFIKE-VIREPVYVVGNSLGGFVAVYFAAC---- 276 (451)
Q Consensus 226 ~~~~~~~~~~~~s~~~~a~dv~------------------------~ll~~-l~~~~v~lvGhS~GG~val~~A~~---- 276 (451)
...++.+.+. +++++ ++.++++||||||||.++..++.+
T Consensus 61 ------------~a~~l~~~i~~~~vDy~~~~a~~~~~~~~~~~l~~ll~~~~~~~kv~LVGHSmGG~va~~~a~~l~~~ 128 (387)
T 2dsn_A 61 ------------RACEAYAQLVGGTVDYGAAHAAKHGHARFGRTYPGLLPELKRGGRIHIIAHSQGGQTARMLVSLLENG 128 (387)
T ss_dssp ------------HHHHHHHHHHCEEEECCHHHHHHHTSCSEEEEECCSCGGGGTTCCEEEEEETTHHHHHHHHHHHHHHC
T ss_pred ------------cHHHHHHHHHhhhhhhhhhhhhhccchhhhhhHHHHHHHhcCCCceEEEEECHHHHHHHHHHHHhccc
Confidence 1112222221 12223 467899999999999999999973
Q ss_pred ---------------CC------CccceEEEeccCC
Q 013006 277 ---------------NP------HLVKGVTLLNATP 291 (451)
Q Consensus 277 ---------------~P------~~v~~lvl~~~~~ 291 (451)
+| ++|+++|+++++.
T Consensus 129 ~~~e~~~~~~~~~~~~P~~~g~~~~V~sLV~i~tP~ 164 (387)
T 2dsn_A 129 SQEEREYAKAHNVSLSPLFEGGHHFVLSVTTIATPH 164 (387)
T ss_dssp CHHHHHHHHHHTCCCCGGGTCCCCCEEEEEEESCCT
T ss_pred cccccccccccccccCccccccccceeEEEEECCCC
Confidence 46 7999999999853
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=99.30 E-value=9.2e-12 Score=130.57 Aligned_cols=136 Identities=14% Similarity=-0.003 Sum_probs=87.2
Q ss_pred ccceeeecCCeEEEEeecCCCC-CCCCcEEEecCCCCCh--------hcHHHHH----Hhh-cCCceEEEEcCCCCCCCC
Q 013006 135 TSCFWEWKPKFNVHYEKAGCEN-VNSPPVLFLPGFGVGS--------FHYEKQL----KDL-GKDYRAWAIDFLGQGMSL 200 (451)
Q Consensus 135 ~~~~~~~~~g~~l~y~~~g~~~-~~~p~VlllHG~~~~~--------~~~~~~~----~~L-~~~~~Vi~~D~rG~G~S~ 200 (451)
....++..||.+|+...+.|.+ .+.|+||++||++... ..|...+ ..| .+||.|+.+|+||+|.|.
T Consensus 38 ~~v~i~~~DG~~L~~~l~~P~~~~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~D~RG~g~S~ 117 (652)
T 2b9v_A 38 REVMVPMRDGVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQ 117 (652)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCC
T ss_pred EEEEEECCCCcEEEEEEEecCCCCCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEEecCcCCCCC
Confidence 3455667899999987776543 2347788889887642 1232222 455 568999999999999997
Q ss_pred CCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh----CC--CCEEEEEeCcchHHHHHHH
Q 013006 201 PDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV----IR--EPVYVVGNSLGGFVAVYFA 274 (451)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l----~~--~~v~lvGhS~GG~val~~A 274 (451)
........ ....+.... ...++|+.++++.+ .. .++.++|+|+||.+++.+|
T Consensus 118 g~~~~~~~------------------~~~~~~~~g----~~~~~D~~~~i~~l~~~~~~~d~rvgl~G~SyGG~~al~~a 175 (652)
T 2b9v_A 118 GDYVMTRP------------------PHGPLNPTK----TDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMAL 175 (652)
T ss_dssp SCCCTTCC------------------CSBTTBCSS----CCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHH
T ss_pred Cccccccc------------------ccccccccc----cchhhHHHHHHHHHHhcCCCCCCCEEEEecCHHHHHHHHHH
Confidence 43221000 000000000 01233444444433 21 4899999999999999999
Q ss_pred HhCCCccceEEEeccCCC
Q 013006 275 ACNPHLVKGVTLLNATPF 292 (451)
Q Consensus 275 ~~~P~~v~~lvl~~~~~~ 292 (451)
.++|++++++|.+++...
T Consensus 176 ~~~~~~lka~v~~~~~~d 193 (652)
T 2b9v_A 176 LDPHPALKVAAPESPMVD 193 (652)
T ss_dssp TSCCTTEEEEEEEEECCC
T ss_pred hcCCCceEEEEecccccc
Confidence 999999999999998643
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=2.6e-10 Score=108.01 Aligned_cols=121 Identities=12% Similarity=0.029 Sum_probs=83.0
Q ss_pred CccceeeecCCeEEEEeecCCCC----CCCCcEEEecCCCCChhcH-------HHHHHhhc-C----CceEEEEcCCCCC
Q 013006 134 ITSCFWEWKPKFNVHYEKAGCEN----VNSPPVLFLPGFGVGSFHY-------EKQLKDLG-K----DYRAWAIDFLGQG 197 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y~~~g~~~----~~~p~VlllHG~~~~~~~~-------~~~~~~L~-~----~~~Vi~~D~rG~G 197 (451)
+....+...+| .+.+..+-|.+ ...|+|+++||.+++...| ..++..|. + ++.|+++|.+|-
T Consensus 41 ~~~~~~~s~~~-~~~~~vy~P~~~~~~~~~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~~~~- 118 (297)
T 1gkl_A 41 IVKETYTGING-TKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGG- 118 (297)
T ss_dssp EEEEEEEETTE-EEEEEEEECTTCCTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTSSCCEEEEECCSCST-
T ss_pred EEEEEEEcCCC-EEEEEEEeCCCCCCCCCCCEEEEECCCCCCcchhhcccchHHHHHHHHHHcCCCCCEEEEEecCcCC-
Confidence 44444555555 66666655532 2457788899998766554 34556663 3 489999998752
Q ss_pred CCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh-CC--------------CCEEEEE
Q 013006 198 MSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV-IR--------------EPVYVVG 262 (451)
Q Consensus 198 ~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l-~~--------------~~v~lvG 262 (451)
+.. .. .+ .+.+++++..+++.. .. +++.|+|
T Consensus 119 -~~~--~~------------------------------~~-~~~~~~~l~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G 164 (297)
T 1gkl_A 119 -NCT--AQ------------------------------NF-YQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGG 164 (297)
T ss_dssp -TCC--TT------------------------------TH-HHHHHHTHHHHHHHHSCSSCSSCSHHHHHTTGGGEEEEE
T ss_pred -ccc--hH------------------------------HH-HHHHHHHHHHHHHHhCCccccccccccccCCccceEEEE
Confidence 211 00 02 245567777777764 22 4589999
Q ss_pred eCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 263 NSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 263 hS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
+||||.+++.++.++|+++++++++++.
T Consensus 165 ~S~GG~~al~~a~~~p~~f~~~v~~sg~ 192 (297)
T 1gkl_A 165 FAMGGLTTWYVMVNCLDYVAYFMPLSGD 192 (297)
T ss_dssp ETHHHHHHHHHHHHHTTTCCEEEEESCC
T ss_pred ECHHHHHHHHHHHhCchhhheeeEeccc
Confidence 9999999999999999999999999985
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=99.19 E-value=4.1e-11 Score=118.20 Aligned_cols=142 Identities=16% Similarity=0.109 Sum_probs=88.5
Q ss_pred CccceeeecCCeEEEEeecCCCC--CCCCcEEEecCCCCChhcH--------------H----HHHHhhc-CCceEEEEc
Q 013006 134 ITSCFWEWKPKFNVHYEKAGCEN--VNSPPVLFLPGFGVGSFHY--------------E----KQLKDLG-KDYRAWAID 192 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y~~~g~~~--~~~p~VlllHG~~~~~~~~--------------~----~~~~~L~-~~~~Vi~~D 192 (451)
+....+...+|.+|.....-|.+ .+.|+||++||++++...+ . .++..|+ +||.|+++|
T Consensus 87 ~e~v~~~~~~g~~l~~~l~~P~~~~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G~~Vl~~D 166 (391)
T 3g8y_A 87 LEKWEFYPFPKSVSTFLVLKPEHLKGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEGYVAVAVD 166 (391)
T ss_dssp EEEEEECCSTTCCEEEEEEEETTCCSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTTTCEEEECC
T ss_pred EEEEEEEcCCCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHCCCEEEEec
Confidence 33344445678888877665543 3458999999998876532 2 4566774 589999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccc---cccccC-HHHHHHHHHHHHHHhC------CCCEEEEE
Q 013006 193 FLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWA---SELAYS-VDLWQDQVCYFIKEVI------REPVYVVG 262 (451)
Q Consensus 193 ~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~---~~~~~s-~~~~a~dv~~ll~~l~------~~~v~lvG 262 (451)
+||+|.|........ .|.. +..... .....+ ....+.|+..+++.+. .+++.++|
T Consensus 167 ~rg~G~s~~~~~~~~-------------~~~~--~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G 231 (391)
T 3g8y_A 167 NAAAGEASDLECYDK-------------GWNY--DYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISG 231 (391)
T ss_dssp CTTSGGGCSSGGGTT-------------TTSC--CHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEE
T ss_pred CCCccccCCcccccc-------------cccc--hHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEE
Confidence 999999864321100 0000 000000 000001 1122356666666652 35789999
Q ss_pred eCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 263 NSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 263 hS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
|||||.+++.+|+.. ++|+++|+.++..
T Consensus 232 ~S~GG~~al~~a~~~-~~i~a~v~~~~~~ 259 (391)
T 3g8y_A 232 FSLGTEPMMVLGVLD-KDIYAFVYNDFLC 259 (391)
T ss_dssp EGGGHHHHHHHHHHC-TTCCEEEEESCBC
T ss_pred EChhHHHHHHHHHcC-CceeEEEEccCCC
Confidence 999999999988875 5799999888643
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.14 E-value=1.2e-10 Score=115.20 Aligned_cols=143 Identities=16% Similarity=0.086 Sum_probs=89.0
Q ss_pred CccceeeecCCeEEEEeecCCCC--CCCCcEEEecCCCCChhcHH------------------HHHHhhc-CCceEEEEc
Q 013006 134 ITSCFWEWKPKFNVHYEKAGCEN--VNSPPVLFLPGFGVGSFHYE------------------KQLKDLG-KDYRAWAID 192 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y~~~g~~~--~~~p~VlllHG~~~~~~~~~------------------~~~~~L~-~~~~Vi~~D 192 (451)
+....+...+|.++....+-|.+ .+.|+||++||.+++...+. .++..|+ +||.|+++|
T Consensus 92 ~e~v~~~~~~g~~l~~~l~~P~~~~~~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~Gy~Vl~~D 171 (398)
T 3nuz_A 92 LEKWEFYPLPKCVSTFLVLIPDNINKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKEGYIAVAVD 171 (398)
T ss_dssp EEEEEECCSTTBCEEEEEEEESSCCSCEEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHTTTCEEEEEC
T ss_pred EEEEEEEcCCCcEEEEEEEeCCCCCCCccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHHHCCCEEEEec
Confidence 34445556688888887765543 34589999999988765322 4666775 489999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCC-CCccccccc-cCHHHHHHHHHHHHHHhC------CCCEEEEEeC
Q 013006 193 FLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDK-AQPWASELA-YSVDLWQDQVCYFIKEVI------REPVYVVGNS 264 (451)
Q Consensus 193 ~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~-~~~~~~~~~-~s~~~~a~dv~~ll~~l~------~~~v~lvGhS 264 (451)
+||+|.|........ .|.+... ...+..... ......+.|+...++.+. .+++.++|||
T Consensus 172 ~rG~G~s~~~~~~~~-------------~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S 238 (398)
T 3nuz_A 172 NPAAGEASDLERYTL-------------GSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFS 238 (398)
T ss_dssp CTTSGGGCSSGGGTT-------------TTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEG
T ss_pred CCCCCcccccccccc-------------ccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEC
Confidence 999999864321000 0000000 000000000 111223456666676663 2579999999
Q ss_pred cchHHHHHHHHhCCCccceEEEeccC
Q 013006 265 LGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 265 ~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
|||.+++.+|+..| +|+++|.++..
T Consensus 239 ~GG~~a~~~aa~~~-~i~a~v~~~~~ 263 (398)
T 3nuz_A 239 LGTEPMMVLGTLDT-SIYAFVYNDFL 263 (398)
T ss_dssp GGHHHHHHHHHHCT-TCCEEEEESCB
T ss_pred HhHHHHHHHHhcCC-cEEEEEEeccc
Confidence 99999998888765 79999887653
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=1.2e-09 Score=108.58 Aligned_cols=46 Identities=11% Similarity=0.026 Sum_probs=39.3
Q ss_pred CCCCCEEEEeeCCCCCCChHHHHHHHHHC----CCCcEEEeCCCCCCccc
Q 013006 395 MNGVPICLIYGKEDPWVKPVWGLQVKRQV----PEAPYYEISPAGHCPHD 440 (451)
Q Consensus 395 ~i~~PvLii~G~~D~~v~~~~~~~l~~~l----p~~~~~~i~~~gH~~~~ 440 (451)
+.++|++++||.+|.++|++.++++.+.+ .+++++++++.+|....
T Consensus 342 ~~~~PvlI~hG~~D~vVP~~~s~~l~~~l~~~G~~V~~~~y~~~~H~~~~ 391 (462)
T 3guu_A 342 VPKFPRFIWHAIPDEIVPYQPAATYVKEQCAKGANINFSPYPIAEHLTAE 391 (462)
T ss_dssp CCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEESSCCHHHHH
T ss_pred CCCCCEEEEeCCCCCcCCHHHHHHHHHHHHHcCCCeEEEEECcCCccCch
Confidence 56899999999999999999988887765 34788999999998764
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=99.07 E-value=3e-10 Score=106.29 Aligned_cols=137 Identities=12% Similarity=0.033 Sum_probs=76.5
Q ss_pred CCeEEEEeecCCCC----CCCCcEEEecCCCC--ChhcHHHHHHhhc--CC---ceEEEEcCCCCCCCCCCCCCCCCCCC
Q 013006 143 PKFNVHYEKAGCEN----VNSPPVLFLPGFGV--GSFHYEKQLKDLG--KD---YRAWAIDFLGQGMSLPDEDPTPRSKE 211 (451)
Q Consensus 143 ~g~~l~y~~~g~~~----~~~p~VlllHG~~~--~~~~~~~~~~~L~--~~---~~Vi~~D~rG~G~S~~~~~~~~~~~~ 211 (451)
+|..+.+..+-|.+ ..-|+|+++||.+. ....|..+...+. .+ +-|+++|.|+.+.-......
T Consensus 28 ~g~~~~~~v~~P~~~~~~~~~Pvl~~lhG~~~~~~~~~~~~~~~~~~~~~g~~~~ivV~i~~~~~~~~~~~~r~------ 101 (275)
T 2qm0_A 28 EGKEYQIHISKPKQPAPDSGYPVIYVLDGNAFFQTFHEAVKIQSVRAEKTGVSPAIIVGVGYPIEGAFSGEERC------ 101 (275)
T ss_dssp TCCEEEEEEECCSSCCCTTCEEEEEEESHHHHHHHHHHHHHHHGGGHHHHCCCCCEEEEEECSCSSSCCHHHHH------
T ss_pred CCCEEEEEEECCCCCCCCCCccEEEEecChHHHHHHHHHHHHHhhcchhcCCCCeEEEEECCCCCCcCcccccc------
Confidence 46777777666543 23478999999753 2223444444442 24 88999999874210000000
Q ss_pred CCchhhhhcccc----CCCC--CCcccccc-ccCHHH-HHHHHHHHHHH-hCC--CCEEEEEeCcchHHHHHHHHhCCCc
Q 013006 212 GDSTEEKNFLWG----FGDK--AQPWASEL-AYSVDL-WQDQVCYFIKE-VIR--EPVYVVGNSLGGFVAVYFAACNPHL 280 (451)
Q Consensus 212 ~~~~~~~~~~w~----~~~~--~~~~~~~~-~~s~~~-~a~dv~~ll~~-l~~--~~v~lvGhS~GG~val~~A~~~P~~ 280 (451)
.....|. +... ..+|.... ...+.+ +.+++..+++. +.+ +++.++||||||.+++.++.++|+.
T Consensus 102 -----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G~S~GG~~a~~~~~~~p~~ 176 (275)
T 2qm0_A 102 -----YDFTPSVISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKGKQTLFGHXLGGLFALHILFTNLNA 176 (275)
T ss_dssp -----HHHCSSCCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCGGG
T ss_pred -----cccCCCCccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCEEEEecchhHHHHHHHHhCchh
Confidence 0000000 0000 00000000 002222 33566666655 333 6799999999999999999999999
Q ss_pred cceEEEeccC
Q 013006 281 VKGVTLLNAT 290 (451)
Q Consensus 281 v~~lvl~~~~ 290 (451)
+++++++++.
T Consensus 177 f~~~~~~s~~ 186 (275)
T 2qm0_A 177 FQNYFISSPS 186 (275)
T ss_dssp CSEEEEESCC
T ss_pred hceeEEeCce
Confidence 9999999875
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=4.3e-09 Score=103.96 Aligned_cols=119 Identities=17% Similarity=0.046 Sum_probs=74.6
Q ss_pred CCeEEEEeecCCCC---CCCCcEEEecCCCCCh-hcHHHHHHhhc-CCc----eEEEEcCCCCC-CCCCCCCCCCCCCCC
Q 013006 143 PKFNVHYEKAGCEN---VNSPPVLFLPGFGVGS-FHYEKQLKDLG-KDY----RAWAIDFLGQG-MSLPDEDPTPRSKEG 212 (451)
Q Consensus 143 ~g~~l~y~~~g~~~---~~~p~VlllHG~~~~~-~~~~~~~~~L~-~~~----~Vi~~D~rG~G-~S~~~~~~~~~~~~~ 212 (451)
.|..+.+..+-|.+ ...|+|+++||.+... ..+..++..|. +++ .|+++|.+|++ ++......
T Consensus 178 ~g~~~~~~vy~P~~~~~~~~PvlvllHG~~~~~~~~~~~~~~~l~~~g~~~p~iVV~~d~~~~~~r~~~~~~~------- 250 (403)
T 3c8d_A 178 LKNSRRVWIFTTGDVTAEERPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTHRAHELPCN------- 250 (403)
T ss_dssp TTEEEEEEEEEC-----CCCCEEEESSHHHHHHTSCCHHHHHHHHHTTSSCSCEEEEECCCSHHHHHHHSSSC-------
T ss_pred cCCcEEEEEEeCCCCCCCCCCEEEEeCCHHHhhcCcHHHHHHHHHHcCCCCCeEEEEECCCCCccccccCCCh-------
Confidence 45555555554432 3468999999943211 11234556663 344 49999998732 11100000
Q ss_pred CchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh-C----CCCEEEEEeCcchHHHHHHHHhCCCccceEEEe
Q 013006 213 DSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV-I----REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLL 287 (451)
Q Consensus 213 ~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l-~----~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~ 287 (451)
..-.+.+++++..++++. . .++++|+||||||.+++.++.++|+++++++++
T Consensus 251 -----------------------~~~~~~l~~el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~ 307 (403)
T 3c8d_A 251 -----------------------ADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQ 307 (403)
T ss_dssp -----------------------HHHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEE
T ss_pred -----------------------HHHHHHHHHHHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCchhhcEEEEe
Confidence 011233456676667653 3 257999999999999999999999999999999
Q ss_pred ccCC
Q 013006 288 NATP 291 (451)
Q Consensus 288 ~~~~ 291 (451)
++..
T Consensus 308 sg~~ 311 (403)
T 3c8d_A 308 SGSY 311 (403)
T ss_dssp SCCT
T ss_pred cccc
Confidence 9853
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=1.3e-07 Score=89.92 Aligned_cols=47 Identities=23% Similarity=0.177 Sum_probs=39.0
Q ss_pred CCCEEEEeeCCCCCCChHHHHHHHHHCC------CCcEEEeCCCCCCccccCh
Q 013006 397 GVPICLIYGKEDPWVKPVWGLQVKRQVP------EAPYYEISPAGHCPHDEVP 443 (451)
Q Consensus 397 ~~PvLii~G~~D~~v~~~~~~~l~~~lp------~~~~~~i~~~gH~~~~e~p 443 (451)
..|++++||++|.+||++.++++.+.+. +++++.++++||....+.+
T Consensus 90 ~~Pvli~HG~~D~vVP~~~s~~~~~~L~~~g~~~~ve~~~~~g~gH~~~~~~~ 142 (318)
T 2d81_A 90 QRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDFN 142 (318)
T ss_dssp GCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEESSC
T ss_pred CCcEEEEeCCCCCCcCHHHHHHHHHHHHhcCCCcceEEEEeCCCCCCCccCCc
Confidence 4699999999999999999998887664 3578899999998765543
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=98.44 E-value=1.2e-05 Score=80.57 Aligned_cols=126 Identities=17% Similarity=0.155 Sum_probs=81.5
Q ss_pred CeEEEEeecCCC----CCCCCcEEEecCCCCChhcHHHHHH-----------------hhcCCceEEEEcC-CCCCCCCC
Q 013006 144 KFNVHYEKAGCE----NVNSPPVLFLPGFGVGSFHYEKQLK-----------------DLGKDYRAWAIDF-LGQGMSLP 201 (451)
Q Consensus 144 g~~l~y~~~g~~----~~~~p~VlllHG~~~~~~~~~~~~~-----------------~L~~~~~Vi~~D~-rG~G~S~~ 201 (451)
+..|+|...... ..++|.||+++|.++++..|-.+.+ .+.+...|+.+|. .|.|.|..
T Consensus 48 ~~~lfy~~~~~~~~~~~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~~~~~~~l~~n~~sw~~~~n~lfiDqPvGtGfSy~ 127 (483)
T 1ac5_A 48 DLEYFFWKFTNNDSNGNVDRPLIIWLNGGPGCSSMDGALVESGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTGTGFSVE 127 (483)
T ss_dssp CCEEEEEEEECSCSGGGSSCCEEEEECCTTTBCTHHHHHHSSSSEEECTTSCEEECTTCGGGTSEEEEECCSTTSTTCSS
T ss_pred CceEEEEEEEecCCCCCcCCCEEEEECCCCchHhhhhhHhhcCCeEecCCCceeecccchhhcCCeEEEecCCCccccCC
Confidence 567887654321 2357999999999998887743321 1123478999997 69999964
Q ss_pred CCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh-------CCCCEEEEEeCcchHHHHHHH
Q 013006 202 DEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV-------IREPVYVVGNSLGGFVAVYFA 274 (451)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l-------~~~~v~lvGhS~GG~val~~A 274 (451)
..... +...++.+ ..+.++.++|+..+|+.. ...+++|.|+|+||..+..+|
T Consensus 128 ~~~~~----------~~~~~~~~-----------~~~~~~~a~~~~~fl~~~~~~fP~~~~~~~~i~GeSYgg~y~p~~a 186 (483)
T 1ac5_A 128 QNKDE----------GKIDKNKF-----------DEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFA 186 (483)
T ss_dssp CCSSG----------GGSCTTSS-----------CCSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHH
T ss_pred cCccc----------cccccccc-----------CCCHHHHHHHHHHHHHHHHHhChhhcCCCEEEEeccccccccHHHH
Confidence 32210 00001111 136677788877777653 447899999999999988777
Q ss_pred HhC------------CCccceEEEeccC
Q 013006 275 ACN------------PHLVKGVTLLNAT 290 (451)
Q Consensus 275 ~~~------------P~~v~~lvl~~~~ 290 (451)
... +=.++++++-++.
T Consensus 187 ~~i~~~n~~~~~~~~~inLkGi~IGNg~ 214 (483)
T 1ac5_A 187 NAILNHNKFSKIDGDTYDLKALLIGNGW 214 (483)
T ss_dssp HHHHHHHHHCCSTTSCCEEEEEEEEEEC
T ss_pred HHHHHhcccccccCcccceeeeEecCCc
Confidence 531 1257899888764
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=98.38 E-value=1.1e-06 Score=84.18 Aligned_cols=51 Identities=22% Similarity=0.275 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHh-CC-CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 240 DLWQDQVCYFIKEV-IR-EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 240 ~~~a~dv~~ll~~l-~~-~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
+.+.+++...++.. .. ....|+||||||..++.++.++|+.+++++.+++.
T Consensus 119 ~~l~~el~p~i~~~~~~~~~r~i~G~S~GG~~al~~~~~~p~~F~~~~~~S~~ 171 (331)
T 3gff_A 119 DFIEKELAPSIESQLRTNGINVLVGHSFGGLVAMEALRTDRPLFSAYLALDTS 171 (331)
T ss_dssp HHHHHTHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHTTCSSCSEEEEESCC
T ss_pred HHHHHHHHHHHHHHCCCCCCeEEEEECHHHHHHHHHHHhCchhhheeeEeCch
Confidence 34445555556553 22 23478999999999999999999999999999985
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=98.38 E-value=4.3e-06 Score=83.10 Aligned_cols=132 Identities=17% Similarity=0.134 Sum_probs=86.9
Q ss_pred CccceeeecCCeEEEEeecCCCC--CCCCcEEEecCCCCChhcHHHHHH-----------hh-------cCCceEEEEcC
Q 013006 134 ITSCFWEWKPKFNVHYEKAGCEN--VNSPPVLFLPGFGVGSFHYEKQLK-----------DL-------GKDYRAWAIDF 193 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y~~~g~~~--~~~p~VlllHG~~~~~~~~~~~~~-----------~L-------~~~~~Vi~~D~ 193 (451)
..+.+++..++..|+|......+ .++|.||++||.++.+..+-.+.+ .| .+..+|+.+|.
T Consensus 21 ~~sGyv~v~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~g~~~e~GP~~~~~~~~~l~~n~~sw~~~~~~lfiDq 100 (452)
T 1ivy_A 21 QYSGYLKSSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLES 100 (452)
T ss_dssp EEEEEEECSTTEEEEEEEECCSSCGGGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEECC
T ss_pred eeEEEEeeCCCCeEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHHHHHhcCCcEEeCCCceeeeCCCcccccccEEEEec
Confidence 44577777778999998765432 347899999999998877633321 11 24578999996
Q ss_pred -CCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHH---hCCCCEEEEEeCcchHH
Q 013006 194 -LGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKE---VIREPVYVVGNSLGGFV 269 (451)
Q Consensus 194 -rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~---l~~~~v~lvGhS~GG~v 269 (451)
+|.|.|....... . ..-....++..+.+..+++. +...+++|.|+|+||..
T Consensus 101 P~GtGfS~~~~~~~--~-----------------------~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y 155 (452)
T 1ivy_A 101 PAGVGFSYSDDKFY--A-----------------------TNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIY 155 (452)
T ss_dssp STTSTTCEESSCCC--C-----------------------CBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHH
T ss_pred CCCCCcCCcCCCCC--c-----------------------CCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceee
Confidence 7999996321110 0 00001223334445555554 34578999999999997
Q ss_pred HHHHHHh----CCCccceEEEeccC
Q 013006 270 AVYFAAC----NPHLVKGVTLLNAT 290 (451)
Q Consensus 270 al~~A~~----~P~~v~~lvl~~~~ 290 (451)
+..+|.. .+-.++++++.++.
T Consensus 156 ~p~la~~i~~~~~~~l~g~~ign~~ 180 (452)
T 1ivy_A 156 IPTLAVLVMQDPSMNLQGLAVGNGL 180 (452)
T ss_dssp HHHHHHHHTTCTTSCEEEEEEESCC
T ss_pred hHHHHHHHHhcCccccceEEecCCc
Confidence 6666653 35679999999985
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=98.36 E-value=6e-07 Score=83.86 Aligned_cols=34 Identities=12% Similarity=0.107 Sum_probs=31.6
Q ss_pred CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 256 EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 256 ~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
+++.|+||||||.+++.++.+ |+.+++++++++.
T Consensus 141 ~r~~i~G~S~GG~~a~~~~~~-p~~f~~~~~~s~~ 174 (278)
T 2gzs_A 141 QRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSASPS 174 (278)
T ss_dssp EEEEEEEETHHHHHHHHHHHH-CSSCSEEEEESGG
T ss_pred CceEEEEECHHHHHHHHHHhC-ccccCeEEEeCcc
Confidence 468999999999999999999 9999999999874
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=98.34 E-value=2.1e-05 Score=74.01 Aligned_cols=116 Identities=18% Similarity=0.292 Sum_probs=70.6
Q ss_pred CCcEEEecCCCCChhcHHHHH--Hhh-c-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCC------
Q 013006 159 SPPVLFLPGFGVGSFHYEKQL--KDL-G-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKA------ 228 (451)
Q Consensus 159 ~p~VlllHG~~~~~~~~~~~~--~~L-~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~------ 228 (451)
-|+|.++||++++...|.... ..+ . .+..++.+|..-.+.--+. +....|.++...
T Consensus 49 ~PVLYlLhG~~~~~~~w~~~~~~~~~~~~~~~~~v~p~~~p~~~~~~~--------------~~~~~~~~g~~~~~y~d~ 114 (299)
T 4fol_A 49 IPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVAN--------------DPEGSWDFGQGAGFYLNA 114 (299)
T ss_dssp BCEEEEECCTTCCHHHHHHHSCHHHHHHHHTCEEEEECSSCCSTTSCC--------------CTTCCSSSBTTBCTTCBC
T ss_pred cCEEEEECCCCCChHHHHHhchHhHHHHHcCchhhccCCCcceeecCC--------------CcccccccccCCcccccc
Confidence 488999999999999886532 223 2 2577888886443332211 111122222211
Q ss_pred --CccccccccCH-HHHHHHHHHHHHHh-CC---------CCEEEEEeCcchHHHHHHHHhC--CCccceEEEeccC
Q 013006 229 --QPWASELAYSV-DLWQDQVCYFIKEV-IR---------EPVYVVGNSLGGFVAVYFAACN--PHLVKGVTLLNAT 290 (451)
Q Consensus 229 --~~~~~~~~~s~-~~~a~dv~~ll~~l-~~---------~~v~lvGhS~GG~val~~A~~~--P~~v~~lvl~~~~ 290 (451)
.+|... +.+ +.+++++..+++.. .. ++..|.||||||.-|+.+|.++ |++..++...++.
T Consensus 115 ~~~p~~~~--~~~~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al~~~~~~~~~~~~s~s~~ 189 (299)
T 4fol_A 115 TQEPYAQH--YQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYLKGYSGKRYKSCSAFAPI 189 (299)
T ss_dssp CSHHHHTT--CBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHHHTGGGTCCSEEEEESCC
T ss_pred ccCccccC--ccHHHHHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHHHhCCCCCceEEEEecccc
Confidence 112111 223 44567777777642 22 4689999999999999999996 5667777776653
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=98.28 E-value=1.5e-06 Score=87.74 Aligned_cols=122 Identities=11% Similarity=0.062 Sum_probs=73.8
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCC---CChhcHHHHHHhhc-C-CceEEEEcCC----CCCCCCCCCCCCCCCCCCC
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFG---VGSFHYEKQLKDLG-K-DYRAWAIDFL----GQGMSLPDEDPTPRSKEGD 213 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~---~~~~~~~~~~~~L~-~-~~~Vi~~D~r----G~G~S~~~~~~~~~~~~~~ 213 (451)
|.+.+....-.....+.|+||++||.+ ++...+......|+ + ++.|+.+|+| |++.+........
T Consensus 81 dcL~l~v~~P~~~~~~~PviV~iHGGg~~~g~~~~~~~~~~~la~~g~~vvv~~nYRlg~~Gf~~~~~~~~~~~------ 154 (489)
T 1qe3_A 81 DCLYVNVFAPDTPSQNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYS------ 154 (489)
T ss_dssp CCCEEEEEEECSSCCSEEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTSC------
T ss_pred CCCEEEEEeCCCCCCCCCEEEEECCCccccCCCCCcccCHHHHHhcCCEEEEecCccCcccccCccccccccCC------
Confidence 445555443221112358999999964 33333323344453 3 4999999999 6665532110000
Q ss_pred chhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh---C--CCCEEEEEeCcchHHHHHHHHhC--CCccceEEE
Q 013006 214 STEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV---I--REPVYVVGNSLGGFVAVYFAACN--PHLVKGVTL 286 (451)
Q Consensus 214 ~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l---~--~~~v~lvGhS~GG~val~~A~~~--P~~v~~lvl 286 (451)
....+.|+.+.+.-+.+.. + .++|.|+|+|+||.+++.++... +++++++|+
T Consensus 155 ---------------------~n~gl~D~~~al~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~ 213 (489)
T 1qe3_A 155 ---------------------DNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIM 213 (489)
T ss_dssp ---------------------SCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEE
T ss_pred ---------------------CCcchHHHHHHHHHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHH
Confidence 0134555555554444433 3 35799999999999988877653 568999999
Q ss_pred eccCC
Q 013006 287 LNATP 291 (451)
Q Consensus 287 ~~~~~ 291 (451)
.++..
T Consensus 214 ~sg~~ 218 (489)
T 1qe3_A 214 ESGAS 218 (489)
T ss_dssp ESCCC
T ss_pred hCCCC
Confidence 99853
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=98.23 E-value=2.2e-06 Score=86.85 Aligned_cols=126 Identities=9% Similarity=0.043 Sum_probs=80.6
Q ss_pred cCCeEEEEeecCCCCCCCCcEEEecCCC---CChhcHHHHHHhhc-C-CceEEEEcCC----CCCCCCCCCCCCCCCCCC
Q 013006 142 KPKFNVHYEKAGCENVNSPPVLFLPGFG---VGSFHYEKQLKDLG-K-DYRAWAIDFL----GQGMSLPDEDPTPRSKEG 212 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~~~~p~VlllHG~~---~~~~~~~~~~~~L~-~-~~~Vi~~D~r----G~G~S~~~~~~~~~~~~~ 212 (451)
.|.+.|....-.....+.|+||++||.+ ++...+......|+ + ++.|+.+|+| |++.+.......
T Consensus 82 edcl~l~v~~P~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~------ 155 (498)
T 2ogt_A 82 EDGLYLNIWSPAADGKKRPVLFWIHGGAFLFGSGSSPWYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGEA------ 155 (498)
T ss_dssp SCCCEEEEEESCSSSCCEEEEEEECCSTTTSCCTTCGGGCCHHHHHHHTCEEEEECCCCHHHHCCCCTTTTCGG------
T ss_pred CCCcEEEEEecCCCCCCCcEEEEEcCCccCCCCCCCCcCCHHHHHhCCCEEEEeCCCcCchhhccCchhhcccc------
Confidence 3556666554322223468999999987 44444333344553 3 4999999999 888775321100
Q ss_pred CchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh---C--CCCEEEEEeCcchHHHHHHHHhC--CCccceEE
Q 013006 213 DSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV---I--REPVYVVGNSLGGFVAVYFAACN--PHLVKGVT 285 (451)
Q Consensus 213 ~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l---~--~~~v~lvGhS~GG~val~~A~~~--P~~v~~lv 285 (451)
......+.+.|+...++-+.+.. + .++|+|+|+|.||.+++.++... +..++++|
T Consensus 156 ------------------~~~~~n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i 217 (498)
T 2ogt_A 156 ------------------YAQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAM 217 (498)
T ss_dssp ------------------GTTGGGHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEE
T ss_pred ------------------ccCCCCcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheee
Confidence 00001145666666666555553 3 36799999999999998887753 45799999
Q ss_pred EeccCC
Q 013006 286 LLNATP 291 (451)
Q Consensus 286 l~~~~~ 291 (451)
+.++..
T Consensus 218 ~~sg~~ 223 (498)
T 2ogt_A 218 LQSGSG 223 (498)
T ss_dssp EESCCT
T ss_pred eccCCc
Confidence 999854
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=98.18 E-value=3.2e-05 Score=70.26 Aligned_cols=129 Identities=16% Similarity=0.135 Sum_probs=88.5
Q ss_pred Cccceeeec--CCeEEEEeecCCC--CCCCCcEEEecCCCCChhcH-HHHHH-----------h-------hcCCceEEE
Q 013006 134 ITSCFWEWK--PKFNVHYEKAGCE--NVNSPPVLFLPGFGVGSFHY-EKQLK-----------D-------LGKDYRAWA 190 (451)
Q Consensus 134 ~~~~~~~~~--~g~~l~y~~~g~~--~~~~p~VlllHG~~~~~~~~-~~~~~-----------~-------L~~~~~Vi~ 190 (451)
....+++.. .|..|+|...... ..++|.||+++|.++.+..+ -.+.+ . +.+..+|+.
T Consensus 19 ~~sGy~~v~~~~~~~lFywf~es~~~~~~~Pl~lwlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlf 98 (255)
T 1whs_A 19 MYSGYITVDEGAGRSLFYLLQEAPEDAQPAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRWNKVANVLF 98 (255)
T ss_dssp EEEEEEEEETTTTEEEEEEEECCCGGGCSCCEEEEECCTTTBCTTTTHHHHTSSSEEECGGGCCEEECTTCGGGTSEEEE
T ss_pred EEEEEEECCCCCCcEEEEEEEEecCCCCCCCEEEEECCCCchHHHHHHHHhccCCeEecCCCCeeeeCcccccccCCEEE
Confidence 345666665 5789998755432 23579999999999988887 43221 1 123478999
Q ss_pred EcC-CCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccc-ccCHHHHHHHHHHHHHH-------hCCCCEEEE
Q 013006 191 IDF-LGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASEL-AYSVDLWQDQVCYFIKE-------VIREPVYVV 261 (451)
Q Consensus 191 ~D~-rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~-~~s~~~~a~dv~~ll~~-------l~~~~v~lv 261 (451)
+|. .|.|.|...... .. ..+.+..++|+..+|+. +...+++|.
T Consensus 99 iDqPvGtGfSy~~~~~----------------------------~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~ 150 (255)
T 1whs_A 99 LDSPAGVGFSYTNTSS----------------------------DIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIA 150 (255)
T ss_dssp ECCSTTSTTCEESSGG----------------------------GGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEE
T ss_pred EecCCCCccCCCcCcc----------------------------ccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEE
Confidence 996 599998532210 01 14667777777777654 244689999
Q ss_pred EeCcchHHHHHHHHhC------CCccceEEEeccC
Q 013006 262 GNSLGGFVAVYFAACN------PHLVKGVTLLNAT 290 (451)
Q Consensus 262 GhS~GG~val~~A~~~------P~~v~~lvl~~~~ 290 (451)
|+|+||..+..+|... .-.++++++.++.
T Consensus 151 GESYgG~yvp~la~~i~~~n~~~inLkGi~ign~~ 185 (255)
T 1whs_A 151 GESYAGHYVPELSQLVHRSKNPVINLKGFMVGNGL 185 (255)
T ss_dssp EEETHHHHHHHHHHHHHHHTCSSCEEEEEEEEEEC
T ss_pred ecCCccccHHHHHHHHHHcCCcccccceEEecCCc
Confidence 9999999988877642 2368999999985
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=98.18 E-value=0.0015 Score=64.15 Aligned_cols=126 Identities=13% Similarity=0.101 Sum_probs=81.6
Q ss_pred ccceeeec-CCeEEEEeecCCC--CCCCCcEEEecCCCCChhcHHHHHHh-----------------hcCCceEEEEcC-
Q 013006 135 TSCFWEWK-PKFNVHYEKAGCE--NVNSPPVLFLPGFGVGSFHYEKQLKD-----------------LGKDYRAWAIDF- 193 (451)
Q Consensus 135 ~~~~~~~~-~g~~l~y~~~g~~--~~~~p~VlllHG~~~~~~~~~~~~~~-----------------L~~~~~Vi~~D~- 193 (451)
.+.+++.. .+..|+|...... ..++|.||.++|.++.+..+-.+.+. +.+..+|+.+|.
T Consensus 17 ysGYv~v~~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~~~~~~~l~~n~~sW~~~an~lfiDqP 96 (421)
T 1cpy_A 17 YTGYLDVEDEDKHFFFWTFESRNDPAKDPVILWLNGGPGCSSLTGLFFALGPSSIGPDLKPIGNPYSWNSNATVIFLDQP 96 (421)
T ss_dssp CEEEEEETTTTEEEEEEEECCSSCTTTSCEEEEECCTTTBCTHHHHTTTTSSEEEETTTEEEECTTCGGGGSEEECCCCS
T ss_pred eEEEEEcCCCCcEEEEEEEEeCCCCCCCCEEEEECCCCchHhHHHHHHccCCcEECCCCceeECCcccccccCEEEecCC
Confidence 45666665 4788888655432 23579999999999888776332210 122367999995
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHH----h---CC--CCEEEEEeC
Q 013006 194 LGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKE----V---IR--EPVYVVGNS 264 (451)
Q Consensus 194 rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~----l---~~--~~v~lvGhS 264 (451)
.|.|.|...... ..+.++.++|+..+|+. . .. .+++|.|.|
T Consensus 97 vGtGfSy~~~~~------------------------------~~~~~~~a~~~~~fl~~~~~~~p~~~~~~~~~yi~GES 146 (421)
T 1cpy_A 97 VNVGFSYSGSSG------------------------------VSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGAS 146 (421)
T ss_dssp TTSTTCEESSCC------------------------------CCSSHHHHHHHHHHHHHHHHHCTTSTTTTCCEEEEEET
T ss_pred CcccccCCCCCC------------------------------CCChHHHHHHHHHHHHHHHHhCHHhcccCCCEEEEeec
Confidence 599998533210 02344555565555543 2 33 689999999
Q ss_pred cchHHHHHHHHhC------CCccceEEEeccC
Q 013006 265 LGGFVAVYFAACN------PHLVKGVTLLNAT 290 (451)
Q Consensus 265 ~GG~val~~A~~~------P~~v~~lvl~~~~ 290 (451)
+||..+-.+|... .=.++++++-++.
T Consensus 147 Y~G~y~p~~a~~i~~~n~~~inLkGi~IGNg~ 178 (421)
T 1cpy_A 147 YAGHYIPVFASEILSHKDRNFNLTSVLIGNGL 178 (421)
T ss_dssp THHHHHHHHHHHHTTCSSCSSCCCEEEEESCC
T ss_pred ccccccHHHHHHHHhccccccceeeEEecCcc
Confidence 9999988877642 1247898887764
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.09 E-value=2.8e-06 Score=96.14 Aligned_cols=90 Identities=18% Similarity=0.248 Sum_probs=68.7
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAY 237 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 237 (451)
..++++++|+.++....|..+...|. .+.|++++.++.
T Consensus 1057 ~~~~L~~l~~~~g~~~~y~~la~~L~-~~~v~~l~~~~~----------------------------------------- 1094 (1304)
T 2vsq_A 1057 QEQIIFAFPPVLGYGLMYQNLSSRLP-SYKLCAFDFIEE----------------------------------------- 1094 (1304)
T ss_dssp SCCEEECCCCTTCBGGGGHHHHTTCC-SCEEEECBCCCS-----------------------------------------
T ss_pred cCCcceeecccccchHHHHHHHhccc-ccceEeecccCH-----------------------------------------
Confidence 35679999999999999999888888 789998876321
Q ss_pred CHHHHHHHHHHHHHHhCC-CCEEEEEeCcchHHHHHHHHhC---CCccceEEEeccCC
Q 013006 238 SVDLWQDQVCYFIKEVIR-EPVYVVGNSLGGFVAVYFAACN---PHLVKGVTLLNATP 291 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l~~-~~v~lvGhS~GG~val~~A~~~---P~~v~~lvl~~~~~ 291 (451)
+++++.....++.+.. .++.++|||+||.+|..+|.+. .+.+..++++++.+
T Consensus 1095 --~~~~~~~~~~i~~~~~~gp~~l~G~S~Gg~lA~e~A~~L~~~g~~v~~l~lld~~~ 1150 (1304)
T 2vsq_A 1095 --EDRLDRYADLIQKLQPEGPLTLFGYSAGCSLAFEAAKKLEEQGRIVQRIIMVDSYK 1150 (1304)
T ss_dssp --TTHHHHHHHHHHHHCCSSCEEEEEETTHHHHHHHHHHHHHHSSCCEEEEEEESCCE
T ss_pred --HHHHHHHHHHHHHhCCCCCeEEEEecCCchHHHHHHHHHHhCCCceeEEEEecCcc
Confidence 1233344455556554 5899999999999999999864 35689999999753
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=97.86 E-value=2.9e-05 Score=79.41 Aligned_cols=121 Identities=12% Similarity=0.036 Sum_probs=74.6
Q ss_pred cCCeEEEEeecCCC-CCCCCcEEEecCCC---CChhcHHHHHHhhc--CCceEEEEcCC----CCCCCCC-CCCCCCCCC
Q 013006 142 KPKFNVHYEKAGCE-NVNSPPVLFLPGFG---VGSFHYEKQLKDLG--KDYRAWAIDFL----GQGMSLP-DEDPTPRSK 210 (451)
Q Consensus 142 ~~g~~l~y~~~g~~-~~~~p~VlllHG~~---~~~~~~~~~~~~L~--~~~~Vi~~D~r----G~G~S~~-~~~~~~~~~ 210 (451)
.|.+.|....-... +...|+||++||.+ ++..........|+ .++-|+.+|+| |++.+.. +..+.
T Consensus 94 edcl~l~v~~P~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~g~vvv~~nYRlg~~Gf~~~~~~~~~~~---- 169 (543)
T 2ha2_A 94 EDCLYLNVWTPYPRPASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPG---- 169 (543)
T ss_dssp SCCCEEEEEEESSCCSSCEEEEEEECCSTTTCCCTTSGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCSSCCS----
T ss_pred CcCCeEEEeecCCCCCCCCeEEEEECCCccccCCCCCCcCChHHHHhcCCEEEEEecccccccccccCCCCCCCCC----
Confidence 45566665543221 22348999999965 23222112223443 47999999999 4554421 11110
Q ss_pred CCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh---CC--CCEEEEEeCcchHHHHHHHHhC--CCccce
Q 013006 211 EGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV---IR--EPVYVVGNSLGGFVAVYFAACN--PHLVKG 283 (451)
Q Consensus 211 ~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l---~~--~~v~lvGhS~GG~val~~A~~~--P~~v~~ 283 (451)
.+.+.|+...++-+.+.. +. ++|+|+|+|.||..++.++... +.++++
T Consensus 170 -------------------------n~gl~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~ 224 (543)
T 2ha2_A 170 -------------------------NVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHR 224 (543)
T ss_dssp -------------------------CHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSE
T ss_pred -------------------------cccHHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhh
Confidence 135666666655555443 33 5799999999999988777653 468999
Q ss_pred EEEeccCC
Q 013006 284 VTLLNATP 291 (451)
Q Consensus 284 lvl~~~~~ 291 (451)
+|+.++.+
T Consensus 225 ~i~~sg~~ 232 (543)
T 2ha2_A 225 AVLQSGTP 232 (543)
T ss_dssp EEEESCCS
T ss_pred heeccCCc
Confidence 99999864
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=97.80 E-value=4e-05 Score=78.11 Aligned_cols=121 Identities=13% Similarity=0.023 Sum_probs=74.1
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCC---CChhcHHHHHHhhc--CCceEEEEcCC----CCCCCCCCCCCCCCCCCCC
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFG---VGSFHYEKQLKDLG--KDYRAWAIDFL----GQGMSLPDEDPTPRSKEGD 213 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~---~~~~~~~~~~~~L~--~~~~Vi~~D~r----G~G~S~~~~~~~~~~~~~~ 213 (451)
|.+.|....-.....+.|+||++||.+ ++..........|+ .++-|+.+|+| |++.+...... +
T Consensus 91 dcl~lnv~~P~~~~~~~Pv~v~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~-~------ 163 (529)
T 1p0i_A 91 DCLYLNVWIPAPKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPEA-P------ 163 (529)
T ss_dssp CCCEEEEEEESSCCSSEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCTTS-C------
T ss_pred cCCeEEEeeCCCCCCCCeEEEEECCCccccCCCCccccChHHHhccCCeEEEEecccccccccccCCCCCCC-c------
Confidence 445555443322223468999999964 23322111224443 37999999999 55544211100 0
Q ss_pred chhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh---CC--CCEEEEEeCcchHHHHHHHHhC--CCccceEEE
Q 013006 214 STEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV---IR--EPVYVVGNSLGGFVAVYFAACN--PHLVKGVTL 286 (451)
Q Consensus 214 ~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l---~~--~~v~lvGhS~GG~val~~A~~~--P~~v~~lvl 286 (451)
..+.+.|+...++-+.+.. +. ++|.|+|+|.||..+..++... +..++++|+
T Consensus 164 ---------------------~n~gl~D~~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~ 222 (529)
T 1p0i_A 164 ---------------------GNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAIL 222 (529)
T ss_dssp ---------------------SCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEE
T ss_pred ---------------------CcccHHHHHHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHH
Confidence 0145666666665554443 43 5799999999999998887764 458999999
Q ss_pred eccCC
Q 013006 287 LNATP 291 (451)
Q Consensus 287 ~~~~~ 291 (451)
.++..
T Consensus 223 ~Sg~~ 227 (529)
T 1p0i_A 223 QSGSF 227 (529)
T ss_dssp ESCCT
T ss_pred hcCcc
Confidence 99864
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=97.79 E-value=3e-06 Score=100.54 Aligned_cols=94 Identities=14% Similarity=0.186 Sum_probs=0.0
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAY 237 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 237 (451)
.+++++++|+.++....|..+...|. ..|+.+..+|. .+ ..
T Consensus 2241 ~~~~Lfc~~~agG~~~~y~~l~~~l~--~~v~~lq~pg~----~~---------------------------------~~ 2281 (2512)
T 2vz8_A 2241 AERPLFLVHPIEGSITVFHGLAAKLS--IPTYGLQCTGA----AP---------------------------------LD 2281 (2512)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCeEEeCCccccHHHHHHHHHhhC--CcEEEEecCCC----CC---------------------------------CC
Confidence 35789999999999999988888885 77888888771 11 03
Q ss_pred CHHHHHHHHHHHHHHhC-CCCEEEEEeCcchHHHHHHHHhCCC---ccc---eEEEeccC
Q 013006 238 SVDLWQDQVCYFIKEVI-REPVYVVGNSLGGFVAVYFAACNPH---LVK---GVTLLNAT 290 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l~-~~~v~lvGhS~GG~val~~A~~~P~---~v~---~lvl~~~~ 290 (451)
++++++++..+.+..+. ..++.++||||||.+|+++|.+... .+. .++++++.
T Consensus 2282 ~i~~la~~~~~~i~~~~p~gpy~L~G~S~Gg~lA~evA~~L~~~G~~v~~~~~L~llDg~ 2341 (2512)
T 2vz8_A 2282 SIQSLASYYIECIRQVQPEGPYRIAGYSYGACVAFEMCSQLQAQQSATPGNHSLFLFDGS 2341 (2512)
T ss_dssp ------------------------------------------------------------
T ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEeCc
Confidence 67778887777776654 3689999999999999999976432 344 67888764
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=6.6e-05 Score=76.76 Aligned_cols=119 Identities=11% Similarity=0.091 Sum_probs=74.4
Q ss_pred cCCeEEEEeecCCC--CCCCCcEEEecCCC---CChhcHHHHHHhhc--CCceEEEEcCC----CCCCCCCCCCCCCCCC
Q 013006 142 KPKFNVHYEKAGCE--NVNSPPVLFLPGFG---VGSFHYEKQLKDLG--KDYRAWAIDFL----GQGMSLPDEDPTPRSK 210 (451)
Q Consensus 142 ~~g~~l~y~~~g~~--~~~~p~VlllHG~~---~~~~~~~~~~~~L~--~~~~Vi~~D~r----G~G~S~~~~~~~~~~~ 210 (451)
.|.+.+....-... +.+.|+||++||.+ ++...|... .|+ .++-|+.+|+| |++.+.....+.
T Consensus 96 edcl~lnv~~P~~~~~~~~~Pv~v~iHGG~~~~g~~~~~~~~--~la~~~g~vvv~~nYRlg~~gf~~~~~~~~~~---- 169 (542)
T 2h7c_A 96 EDCLYLNIYTPADLTKKNRLPVMVWIHGGGLMVGAASTYDGL--ALAAHENVVVVTIQYRLGIWGFFSTGDEHSRG---- 169 (542)
T ss_dssp SCCCEEEEEECSCTTSCCCEEEEEEECCSTTTSCCSTTSCCH--HHHHHHTCEEEEECCCCHHHHHCCCSSTTCCC----
T ss_pred CCCcEEEEEECCCCCCCCCCCEEEEECCCcccCCCccccCHH--HHHhcCCEEEEecCCCCccccCCCCCcccCcc----
Confidence 35556655543221 23458999999954 333333322 232 47999999999 555442111110
Q ss_pred CCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh---CC--CCEEEEEeCcchHHHHHHHHh--CCCccce
Q 013006 211 EGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV---IR--EPVYVVGNSLGGFVAVYFAAC--NPHLVKG 283 (451)
Q Consensus 211 ~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l---~~--~~v~lvGhS~GG~val~~A~~--~P~~v~~ 283 (451)
.+.+.|+...++-+.+.. +. ++|+|+|+|.||..+..++.. .+.++++
T Consensus 170 -------------------------n~gl~D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ 224 (542)
T 2h7c_A 170 -------------------------NWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHR 224 (542)
T ss_dssp -------------------------CHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSE
T ss_pred -------------------------chhHHHHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHH
Confidence 134556655555444433 33 579999999999999888876 3678999
Q ss_pred EEEeccCC
Q 013006 284 VTLLNATP 291 (451)
Q Consensus 284 lvl~~~~~ 291 (451)
+|++++..
T Consensus 225 ai~~Sg~~ 232 (542)
T 2h7c_A 225 AISESGVA 232 (542)
T ss_dssp EEEESCCT
T ss_pred HhhhcCCc
Confidence 99999864
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=97.69 E-value=3.9e-05 Score=78.55 Aligned_cols=104 Identities=14% Similarity=0.094 Sum_probs=67.2
Q ss_pred CCcEEEecCCC---CChhcHHHHHHhh-cCCceEEEEcCCC----CCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCc
Q 013006 159 SPPVLFLPGFG---VGSFHYEKQLKDL-GKDYRAWAIDFLG----QGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQP 230 (451)
Q Consensus 159 ~p~VlllHG~~---~~~~~~~~~~~~L-~~~~~Vi~~D~rG----~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 230 (451)
.|+||++||.+ ++..........| ..++-|+.+|+|. +..+.....+
T Consensus 115 ~Pviv~iHGGg~~~g~~~~~~~~~~~l~~~g~vvv~~nYRl~~~Gf~~~~~~~~~------------------------- 169 (551)
T 2fj0_A 115 LPVLVFIHGGGFAFGSGDSDLHGPEYLVSKDVIVITFNYRLNVYGFLSLNSTSVP------------------------- 169 (551)
T ss_dssp EEEEEEECCSTTTSCCSCTTTCBCTTGGGGSCEEEEECCCCHHHHHCCCSSSSCC-------------------------
T ss_pred CCEEEEEcCCccccCCCcccccCHHHHHhCCeEEEEeCCcCCccccccCcccCCC-------------------------
Confidence 58999999954 2222211223344 4589999999994 3332111110
Q ss_pred cccccccCHHHHHHHHHHHHHH---hC--CCCEEEEEeCcchHHHHHHHHh--CCCccceEEEeccCC
Q 013006 231 WASELAYSVDLWQDQVCYFIKE---VI--REPVYVVGNSLGGFVAVYFAAC--NPHLVKGVTLLNATP 291 (451)
Q Consensus 231 ~~~~~~~s~~~~a~dv~~ll~~---l~--~~~v~lvGhS~GG~val~~A~~--~P~~v~~lvl~~~~~ 291 (451)
....+.|+...++-+.+. .+ .++|+|+|+|.||.+++.++.. .+..++++|++++.+
T Consensus 170 ----~n~gl~D~~~al~wv~~~i~~fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 233 (551)
T 2fj0_A 170 ----GNAGLRDMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTS 233 (551)
T ss_dssp ----SCHHHHHHHHHHHHHHHHTGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCT
T ss_pred ----CchhHHHHHHHHHHHHHHHHHhCCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCCc
Confidence 014566666666555444 33 3579999999999999988776 456899999999864
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00039 Score=69.67 Aligned_cols=109 Identities=18% Similarity=0.252 Sum_probs=76.0
Q ss_pred CCcEEEecCCCCChhcHH---HHHHhhcC--CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccc
Q 013006 159 SPPVLFLPGFGVGSFHYE---KQLKDLGK--DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWAS 233 (451)
Q Consensus 159 ~p~VlllHG~~~~~~~~~---~~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 233 (451)
+|.+|++ |.-++...+. .++..|++ +--++.+.+|-+|.|.+.+..+. +...+.
T Consensus 43 gPIfl~~-gGEg~~~~~~~~~g~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~st----------~~~nL~---------- 101 (472)
T 4ebb_A 43 GPIFFYT-GNEGDVWAFANNSAFVAELAAERGALLVFAEHRYYGKSLPFGAQST----------QRGHTE---------- 101 (472)
T ss_dssp CCEEEEE-CCSSCHHHHHHHCHHHHHHHHHHTCEEEEECCTTSTTCCTTGGGGG----------STTSCT----------
T ss_pred CcEEEEE-CCCccccccccCccHHHHHHHHhCCeEEEEecccccCCcCCCCCCc----------cccccc----------
Confidence 5555555 4434433221 23445554 57799999999999976432110 000111
Q ss_pred ccccCHHHHHHHHHHHHHHhC------CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 234 ELAYSVDLWQDQVCYFIKEVI------REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 234 ~~~~s~~~~a~dv~~ll~~l~------~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
..|.++..+|+..|++.+. ..|++++|-|+||++|..+-.+||+.|.+.+.-+++
T Consensus 102 --yLt~eQALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~lv~ga~ASSAp 162 (472)
T 4ebb_A 102 --LLTVEQALADFAELLRALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAP 162 (472)
T ss_dssp --TCSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCC
T ss_pred --cCCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEccCccchhhHHHHhhCCCeEEEEEecccc
Confidence 2689999999999998763 248999999999999999999999999999988764
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=97.66 E-value=7.2e-05 Score=76.35 Aligned_cols=121 Identities=12% Similarity=0.074 Sum_probs=74.1
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCC---CChhcHHHHHHhhc--CCceEEEEcCC----CCCCCCCCCCCCCCCCCCC
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFG---VGSFHYEKQLKDLG--KDYRAWAIDFL----GQGMSLPDEDPTPRSKEGD 213 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~---~~~~~~~~~~~~L~--~~~~Vi~~D~r----G~G~S~~~~~~~~~~~~~~ 213 (451)
|.+.|....-.....+.|+||++||.+ ++..........|+ .++-|+.+++| |+..+...... +
T Consensus 93 dcl~lnv~~P~~~~~~~Pv~v~iHGG~~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~-~------ 165 (537)
T 1ea5_A 93 DCLYLNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEA-P------ 165 (537)
T ss_dssp CCCEEEEEECSSCCSSEEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCHHHHHCCCTTCSSS-C------
T ss_pred cCCeEEEeccCCCCCCCeEEEEECCCcccCCCCCCCccChHHHHhcCCEEEEEeccCccccccccCCCCCCC-c------
Confidence 455565544322223468999999954 22222111223443 47999999999 45444110000 0
Q ss_pred chhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh---CC--CCEEEEEeCcchHHHHHHHHh--CCCccceEEE
Q 013006 214 STEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV---IR--EPVYVVGNSLGGFVAVYFAAC--NPHLVKGVTL 286 (451)
Q Consensus 214 ~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l---~~--~~v~lvGhS~GG~val~~A~~--~P~~v~~lvl 286 (451)
..+.+.|+...++-+.+.. +. ++|.|+|+|.||..+..++.. .+..++++|+
T Consensus 166 ---------------------~n~gl~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~ 224 (537)
T 1ea5_A 166 ---------------------GNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAIL 224 (537)
T ss_dssp ---------------------SCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEE
T ss_pred ---------------------CccccHHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhhee
Confidence 0145666666665555543 33 679999999999998887765 2458999999
Q ss_pred eccCC
Q 013006 287 LNATP 291 (451)
Q Consensus 287 ~~~~~ 291 (451)
.++..
T Consensus 225 ~Sg~~ 229 (537)
T 1ea5_A 225 QSGSP 229 (537)
T ss_dssp ESCCT
T ss_pred ccCCc
Confidence 99864
|
| >4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A* | Back alignment and structure |
|---|
Probab=97.65 E-value=0.0017 Score=60.28 Aligned_cols=128 Identities=18% Similarity=0.119 Sum_probs=88.6
Q ss_pred CccceeeecCCeEEEEeecCCC--CCCCCcEEEecCCCCChhcHHHHHHh-----------h-------cCCceEEEEcC
Q 013006 134 ITSCFWEWKPKFNVHYEKAGCE--NVNSPPVLFLPGFGVGSFHYEKQLKD-----------L-------GKDYRAWAIDF 193 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y~~~g~~--~~~~p~VlllHG~~~~~~~~~~~~~~-----------L-------~~~~~Vi~~D~ 193 (451)
.-+.+++..++..|+|.....+ ..+.|.||.+.|.++.+..+-.+.+. | .+..+|+.+|.
T Consensus 23 ~ysGyv~v~~~~~lFywf~es~~~p~~~Pl~lWlnGGPGcSS~~g~~~E~GP~~~~~~~~~l~~N~~sW~~~an~lfiD~ 102 (300)
T 4az3_A 23 QYSGYLKGSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLES 102 (300)
T ss_dssp EEEEEEECSTTEEEEEEEECCSSCTTTSCEEEEECCTTTBCTHHHHHHTTSSEEECTTSSCEEECTTCGGGSSEEEEECC
T ss_pred eeeeeeecCCCCeEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHHHHhcCCCceecCCCccccccCccHHhhhcchhhcC
Confidence 4467777788899999877543 23468999999999988877443321 1 12357999997
Q ss_pred C-CCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHH-------hCCCCEEEEEeCc
Q 013006 194 L-GQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKE-------VIREPVYVVGNSL 265 (451)
Q Consensus 194 r-G~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~-------l~~~~v~lvGhS~ 265 (451)
| |.|.|....... ..+..+.++|+..+|+. +...+++|.|-|+
T Consensus 103 PvGtGfSy~~~~~~-----------------------------~~~~~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GESY 153 (300)
T 4az3_A 103 PAGVGFSYSDDKFY-----------------------------ATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESY 153 (300)
T ss_dssp STTSTTCEETTCCC-----------------------------CCBHHHHHHHHHHHHHHHHHHCGGGTTSCEEEEEETT
T ss_pred CCcccccccCCCcc-----------------------------cccchhhHHHHHHHHHHHHHhChhhcCCceEEEecCC
Confidence 7 888885432210 13566667777666653 2357899999999
Q ss_pred chHHHHHHHHhC----CCccceEEEeccC
Q 013006 266 GGFVAVYFAACN----PHLVKGVTLLNAT 290 (451)
Q Consensus 266 GG~val~~A~~~----P~~v~~lvl~~~~ 290 (451)
||..+-.+|... .=.++++++-++.
T Consensus 154 ~G~yvP~~a~~i~~~~~inLkG~~iGNg~ 182 (300)
T 4az3_A 154 AGIYIPTLAVLVMQDPSMNLQGLAVGNGL 182 (300)
T ss_dssp HHHHHHHHHHHHTTCTTSCEEEEEEESCC
T ss_pred ceeeHHHHHHHHHhCCCcccccceecCCc
Confidence 999988887642 2257888888874
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00012 Score=74.46 Aligned_cols=122 Identities=13% Similarity=0.100 Sum_probs=72.2
Q ss_pred cCCeEEEEeecCC--CCCCCCcEEEecCCCCC---hhcHHH--HHHhhcCCceEEEEcCC----CCCCCCCCCCCCCCCC
Q 013006 142 KPKFNVHYEKAGC--ENVNSPPVLFLPGFGVG---SFHYEK--QLKDLGKDYRAWAIDFL----GQGMSLPDEDPTPRSK 210 (451)
Q Consensus 142 ~~g~~l~y~~~g~--~~~~~p~VlllHG~~~~---~~~~~~--~~~~L~~~~~Vi~~D~r----G~G~S~~~~~~~~~~~ 210 (451)
.|.+.+....-.. .+.+.|+||++||.+.. ...|.. ++.....++-|+.+|+| |++.+........
T Consensus 83 edcl~l~v~~P~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~~~~~~g~vvv~~nYRlg~~Gf~~~~~~~~~~~--- 159 (522)
T 1ukc_A 83 EDCLFINVFKPSTATSQSKLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGD--- 159 (522)
T ss_dssp SCCCEEEEEEETTCCTTCCEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHSSC---
T ss_pred CcCCEEEEEECCCCCCCCCCCEEEEECCCccccCCccccCcHHHHHhcCCcEEEEEecccccccccccchhccccCC---
Confidence 3455555544321 12345899999997532 222322 22222457999999999 5554421100000
Q ss_pred CCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh---CC--CCEEEEEeCcchHHHHHHHHhC----CCcc
Q 013006 211 EGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV---IR--EPVYVVGNSLGGFVAVYFAACN----PHLV 281 (451)
Q Consensus 211 ~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l---~~--~~v~lvGhS~GG~val~~A~~~----P~~v 281 (451)
....+.|+...++-+.+.. +. ++|.|+|+|.||..+..++... +.++
T Consensus 160 ------------------------~n~gl~D~~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf 215 (522)
T 1ukc_A 160 ------------------------LNAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLF 215 (522)
T ss_dssp ------------------------TTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSC
T ss_pred ------------------------CChhHHHHHHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCccccccc
Confidence 0145666666665554443 33 5799999999998776665543 5689
Q ss_pred ceEEEeccC
Q 013006 282 KGVTLLNAT 290 (451)
Q Consensus 282 ~~lvl~~~~ 290 (451)
+++|+.++.
T Consensus 216 ~~~i~~sg~ 224 (522)
T 1ukc_A 216 IGAIVESSF 224 (522)
T ss_dssp SEEEEESCC
T ss_pred hhhhhcCCC
Confidence 999999875
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=97.34 E-value=0.0032 Score=60.88 Aligned_cols=35 Identities=17% Similarity=-0.025 Sum_probs=31.2
Q ss_pred CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 255 REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 255 ~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
.++|.++|||+||..++.+++..+ ||+.+|...+.
T Consensus 218 ~~RIgv~G~S~gG~~Al~aaA~D~-Ri~~vi~~~sg 252 (433)
T 4g4g_A 218 TKRLGVTGCSRNGKGAFITGALVD-RIALTIPQESG 252 (433)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCC
T ss_pred hhHEEEEEeCCCcHHHHHHHhcCC-ceEEEEEecCC
Confidence 368999999999999999999986 89999998863
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.023 Score=54.20 Aligned_cols=52 Identities=17% Similarity=0.086 Sum_probs=39.7
Q ss_pred CHHHHHHHHHHHHHHh------CC--CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 238 SVDLWQDQVCYFIKEV------IR--EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l------~~--~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
++..|+=++...++.| .+ ++|.++|||+||..++.+|+..+ ||+.+|...+.
T Consensus 159 al~awaWg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D~-Ri~~~v~~~~g 218 (375)
T 3pic_A 159 AMTAWAWGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFEK-RIVLTLPQESG 218 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCC
T ss_pred HHHHHHHHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhcCC-ceEEEEeccCC
Confidence 4555555555555554 22 57999999999999999999986 89999998763
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00055 Score=69.74 Aligned_cols=122 Identities=11% Similarity=0.061 Sum_probs=71.6
Q ss_pred CCeEEEEeecCC--CCCCCCcEEEecCCC---CChhcH--HHHHH-hhc--CCceEEEEcCCC----CCCCCCCCCCCCC
Q 013006 143 PKFNVHYEKAGC--ENVNSPPVLFLPGFG---VGSFHY--EKQLK-DLG--KDYRAWAIDFLG----QGMSLPDEDPTPR 208 (451)
Q Consensus 143 ~g~~l~y~~~g~--~~~~~p~VlllHG~~---~~~~~~--~~~~~-~L~--~~~~Vi~~D~rG----~G~S~~~~~~~~~ 208 (451)
|.+.+....-.. ...+.|+||++||.+ ++...| ..++. .++ .++-|+.+|+|. +..+.......
T Consensus 96 dcl~l~v~~P~~~~~~~~~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~-- 173 (534)
T 1llf_A 96 DCLTINVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEG-- 173 (534)
T ss_dssp CCCEEEEEECTTCCTTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHT--
T ss_pred CCeEEEEEECCCCCCCCCceEEEEEeCCCcccCCCcccCchHHHHHHHhcCCCEEEEEeCCCCCCCCCCCcccccccC--
Confidence 445565554321 122458999999965 223333 23333 232 469999999994 21110000000
Q ss_pred CCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh---CC--CCEEEEEeCcchHHHHHHHHhC------
Q 013006 209 SKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV---IR--EPVYVVGNSLGGFVAVYFAACN------ 277 (451)
Q Consensus 209 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l---~~--~~v~lvGhS~GG~val~~A~~~------ 277 (451)
.....+.|+...++-+.+.. +. ++|.|+|+|.||..+..++...
T Consensus 174 -------------------------~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~ 228 (534)
T 1llf_A 174 -------------------------SGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTY 228 (534)
T ss_dssp -------------------------CTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEE
T ss_pred -------------------------CCchhHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccc
Confidence 00145666666666555543 33 6799999999998777665553
Q ss_pred --CCccceEEEeccCC
Q 013006 278 --PHLVKGVTLLNATP 291 (451)
Q Consensus 278 --P~~v~~lvl~~~~~ 291 (451)
+.+++++|+.++.+
T Consensus 229 ~~~~lf~~ai~~Sg~~ 244 (534)
T 1llf_A 229 KGKPLFRAGIMQSGAM 244 (534)
T ss_dssp TTEESCSEEEEESCCS
T ss_pred cccchhHhHhhhccCc
Confidence 56799999999854
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0011 Score=68.05 Aligned_cols=103 Identities=12% Similarity=0.123 Sum_probs=67.2
Q ss_pred CCCcEEEecCCC---CChhcHHHHHHhhcC--CceEEEEcCC----CCCCCCCCCCCCCCCCCCCchhhhhccccCCCCC
Q 013006 158 NSPPVLFLPGFG---VGSFHYEKQLKDLGK--DYRAWAIDFL----GQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKA 228 (451)
Q Consensus 158 ~~p~VlllHG~~---~~~~~~~~~~~~L~~--~~~Vi~~D~r----G~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 228 (451)
..|+||++||.+ ++...|+. ..|++ ++-|+.+|+| |+..+.....+.
T Consensus 130 ~~Pv~v~iHGGg~~~g~~~~~~~--~~la~~~~~vvv~~~YRl~~~Gfl~~~~~~~~~---------------------- 185 (574)
T 3bix_A 130 PKPVMVYIHGGSYMEGTGNLYDG--SVLASYGNVIVITVNYRLGVLGFLSTGDQAAKG---------------------- 185 (574)
T ss_dssp CEEEEEECCCSSSSSCCGGGSCC--HHHHHHHTCEEEEECCCCHHHHHCCCSSSSCCC----------------------
T ss_pred CCcEEEEECCCcccCCCCCccCc--hhhhccCCEEEEEeCCcCcccccCcCCCCCCCC----------------------
Confidence 458999999964 23333332 23432 6999999999 444332111110
Q ss_pred CccccccccCHHHHHHHHHHHHHHh---CC--CCEEEEEeCcchHHHHHHHHhCC---CccceEEEeccCC
Q 013006 229 QPWASELAYSVDLWQDQVCYFIKEV---IR--EPVYVVGNSLGGFVAVYFAACNP---HLVKGVTLLNATP 291 (451)
Q Consensus 229 ~~~~~~~~~s~~~~a~dv~~ll~~l---~~--~~v~lvGhS~GG~val~~A~~~P---~~v~~lvl~~~~~ 291 (451)
.+.+.|+...++-+.+.. +. ++|+|+|+|.||..+..++.... ..++++|+.++.+
T Consensus 186 -------n~gl~D~~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~~ 249 (574)
T 3bix_A 186 -------NYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGTA 249 (574)
T ss_dssp -------CHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCCS
T ss_pred -------cccHHHHHHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCCc
Confidence 145677776666555543 33 57999999999999988887653 4689999988643
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0011 Score=68.06 Aligned_cols=120 Identities=10% Similarity=0.053 Sum_probs=71.2
Q ss_pred CCeEEEEeecCC---CCCCCCcEEEecCCCCChhcH---------HHHHHhhc--CCceEEEEcCC----CCCCCCCCCC
Q 013006 143 PKFNVHYEKAGC---ENVNSPPVLFLPGFGVGSFHY---------EKQLKDLG--KDYRAWAIDFL----GQGMSLPDED 204 (451)
Q Consensus 143 ~g~~l~y~~~g~---~~~~~p~VlllHG~~~~~~~~---------~~~~~~L~--~~~~Vi~~D~r----G~G~S~~~~~ 204 (451)
|.+.|....-.. .+.+.|+||++||.+.....- ......|+ .++-|+.+++| |+..+.....
T Consensus 79 dcl~lnv~~P~~~~~~~~~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la~~~~vvvV~~nYRLg~~Gfl~~~~~~~ 158 (579)
T 2bce_A 79 DCLYLNIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSNL 158 (579)
T ss_dssp CCCEEEEEEEECSSSCCCSEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTTC
T ss_pred CCCEEEEEECCCCCCCCCCCeEEEEECCCcccCCCCCccccccccccChHHHhcCCCEEEEEeCCccccccCCcCCCCCC
Confidence 455555543211 123458999999975321111 00123342 26999999999 5544321111
Q ss_pred CCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh---CC--CCEEEEEeCcchHHHHHHHHh--C
Q 013006 205 PTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV---IR--EPVYVVGNSLGGFVAVYFAAC--N 277 (451)
Q Consensus 205 ~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l---~~--~~v~lvGhS~GG~val~~A~~--~ 277 (451)
+ . .+.+.|+...++-+.+.. +. ++|.|+|+|.||..+..++.. .
T Consensus 159 p--g---------------------------n~gl~D~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~ 209 (579)
T 2bce_A 159 P--G---------------------------NYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYN 209 (579)
T ss_dssp C--C---------------------------CHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGG
T ss_pred C--C---------------------------ccchHHHHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCcch
Confidence 1 0 034666666665555443 33 579999999999998877764 3
Q ss_pred CCccceEEEeccCC
Q 013006 278 PHLVKGVTLLNATP 291 (451)
Q Consensus 278 P~~v~~lvl~~~~~ 291 (451)
...++++|+.++.+
T Consensus 210 ~~lf~~ai~~Sg~~ 223 (579)
T 2bce_A 210 KGLIKRAISQSGVG 223 (579)
T ss_dssp TTTCSEEEEESCCT
T ss_pred hhHHHHHHHhcCCc
Confidence 46899999998753
|
| >1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0054 Score=56.03 Aligned_cols=128 Identities=17% Similarity=0.163 Sum_probs=78.6
Q ss_pred Cccceeeec--CCeEEEEeecCC-C--CCCCCcEEEecCCCCChhcH-HHHHH-----------hh-------cCCceEE
Q 013006 134 ITSCFWEWK--PKFNVHYEKAGC-E--NVNSPPVLFLPGFGVGSFHY-EKQLK-----------DL-------GKDYRAW 189 (451)
Q Consensus 134 ~~~~~~~~~--~g~~l~y~~~g~-~--~~~~p~VlllHG~~~~~~~~-~~~~~-----------~L-------~~~~~Vi 189 (451)
....+++.. .|..|+|..... . ..++|.||.++|.++.+..+ -.+.+ .| .+..+|+
T Consensus 24 ~~sGyv~v~~~~~~~lFywf~es~~~~p~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~SW~~~anll 103 (270)
T 1gxs_A 24 MYGGYVTIDDNNGRALYYWFQEADTADPAAAPLVLWLNGGPGCSSIGLGAMQELGAFRVHTNGESLLLNEYAWNKAANIL 103 (270)
T ss_dssp EEEEEEEEETTTTEEEEEEEECCCSSCGGGSCEEEEEECTTTBCTTTTHHHHTTSSEEECTTSSCEEECTTCGGGTSEEE
T ss_pred EEEEEEEcCCCCCcEEEEEEEEecCCCCCCCCEEEEecCCCcccchhhhhHHhccCceecCCCCcceeCccchhccccEE
Confidence 345666654 467899875543 2 23478999999999988886 43321 11 1246899
Q ss_pred EEcC-CCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHH-------hCCCCEEEE
Q 013006 190 AIDF-LGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKE-------VIREPVYVV 261 (451)
Q Consensus 190 ~~D~-rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~-------l~~~~v~lv 261 (451)
.+|. .|.|.|...... ....+-+..++|+..+|+. +...+++|.
T Consensus 104 fiDqPvGtGfSy~~~~~----------------------------~~~~~d~~~a~d~~~fl~~f~~~fp~~~~~~~yi~ 155 (270)
T 1gxs_A 104 FAESPAGVGFSYSNTSS----------------------------DLSMGDDKMAQDTYTFLVKWFERFPHYNYREFYIA 155 (270)
T ss_dssp EECCSTTSTTCEESSGG----------------------------GGCCCHHHHHHHHHHHHHHHHHHCGGGTTSEEEEE
T ss_pred EEeccccccccCCCCCc----------------------------cccCCcHHHHHHHHHHHHHHHHhChhhcCCCEEEE
Confidence 9995 699998532210 0012444556665555543 344689999
Q ss_pred EeCcchHHHHHHHHh--C-----CCccceEEEeccC
Q 013006 262 GNSLGGFVAVYFAAC--N-----PHLVKGVTLLNAT 290 (451)
Q Consensus 262 GhS~GG~val~~A~~--~-----P~~v~~lvl~~~~ 290 (451)
|.| |-++...+... . .=.++++++.++.
T Consensus 156 GES-G~yvP~la~~i~~~n~~~~~inLkGi~ign~~ 190 (270)
T 1gxs_A 156 GES-GHFIPQLSQVVYRNRNNSPFINFQGLLVSSGL 190 (270)
T ss_dssp EEC-TTHHHHHHHHHHHTTTTCTTCEEEEEEEESCC
T ss_pred eCC-CcchHHHHHHHHhccccccceeeeeEEEeCCc
Confidence 999 65544332221 1 1358999999975
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0022 Score=65.44 Aligned_cols=107 Identities=12% Similarity=0.118 Sum_probs=65.9
Q ss_pred CCCcEEEecCCCC---ChhcH--HHHHH-hhc--CCceEEEEcCCC----CCCCCCCCCCCCCCCCCCchhhhhccccCC
Q 013006 158 NSPPVLFLPGFGV---GSFHY--EKQLK-DLG--KDYRAWAIDFLG----QGMSLPDEDPTPRSKEGDSTEEKNFLWGFG 225 (451)
Q Consensus 158 ~~p~VlllHG~~~---~~~~~--~~~~~-~L~--~~~~Vi~~D~rG----~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~ 225 (451)
+.|+||++||.+. +...| ..++. .++ .++-|+.+|+|. +..+.......
T Consensus 121 ~~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~------------------- 181 (544)
T 1thg_A 121 KLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEG------------------- 181 (544)
T ss_dssp CEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHT-------------------
T ss_pred CCcEEEEECCCccccCCccccCchHHHHHHhhcCCCEEEEeCCCCCCcccCCCcccccccC-------------------
Confidence 4589999999642 22223 22333 343 369999999995 21110000000
Q ss_pred CCCCccccccccCHHHHHHHHHHHHHHh---CC--CCEEEEEeCcchHHHHHHHHhC--------CCccceEEEeccCC
Q 013006 226 DKAQPWASELAYSVDLWQDQVCYFIKEV---IR--EPVYVVGNSLGGFVAVYFAACN--------PHLVKGVTLLNATP 291 (451)
Q Consensus 226 ~~~~~~~~~~~~s~~~~a~dv~~ll~~l---~~--~~v~lvGhS~GG~val~~A~~~--------P~~v~~lvl~~~~~ 291 (451)
...+.+.|+.+.++-+.+.. +. ++|.|+|+|.||..++.++... +.+++++|+.++.+
T Consensus 182 --------~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~~ 252 (544)
T 1thg_A 182 --------NTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp --------CTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred --------CCchhHHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEecccc
Confidence 00145666666666555543 33 6799999999999888777652 45799999999854
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=96.97 E-value=0.00076 Score=69.47 Aligned_cols=112 Identities=12% Similarity=-0.010 Sum_probs=65.3
Q ss_pred CCCcEEEecCCC---CChhcHHHHHHhhc--CCceEEEEcCC----CCCCCCCCCCCCCCCCCCCchhhhhccccCCCCC
Q 013006 158 NSPPVLFLPGFG---VGSFHYEKQLKDLG--KDYRAWAIDFL----GQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKA 228 (451)
Q Consensus 158 ~~p~VlllHG~~---~~~~~~~~~~~~L~--~~~~Vi~~D~r----G~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 228 (451)
+.|+||++||.+ ++...+......|+ .++-|+.+|+| |+....+..... ... .
T Consensus 140 ~~PV~v~iHGGg~~~g~~~~~~~~~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~----------~~~-------~- 201 (585)
T 1dx4_A 140 GLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSE----------FAE-------E- 201 (585)
T ss_dssp SEEEEEEECCSTTTCCCTTCGGGCCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGG----------GTT-------S-
T ss_pred CCCEEEEECCCcccCCCCCCCCCCchhhhccCCEEEEEecccccchhhcccccccccc----------cCC-------C-
Confidence 458999999964 22222212223443 37999999999 554331100000 000 0
Q ss_pred CccccccccCHHHHHHHHHHHHHH---hCC--CCEEEEEeCcchHHHHHHHHhC--CCccceEEEeccCC
Q 013006 229 QPWASELAYSVDLWQDQVCYFIKE---VIR--EPVYVVGNSLGGFVAVYFAACN--PHLVKGVTLLNATP 291 (451)
Q Consensus 229 ~~~~~~~~~s~~~~a~dv~~ll~~---l~~--~~v~lvGhS~GG~val~~A~~~--P~~v~~lvl~~~~~ 291 (451)
....+.+.|+...++-+.+. .+. ++|.|+|+|.||..+..++... ..+++++|+.++..
T Consensus 202 ----~~~n~gl~D~~~al~wv~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 202 ----APGNVGLWDQALAIRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp ----SCSCHHHHHHHHHHHHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred ----CCCcccHHHHHHHHHHHHHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence 00013456655555544443 233 5799999999999887776652 36799999998754
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0033 Score=57.93 Aligned_cols=40 Identities=28% Similarity=0.200 Sum_probs=28.3
Q ss_pred CHHHHHHHHHHHHHHh----CCCCEEEEEeCcchHHHHHHHHhC
Q 013006 238 SVDLWQDQVCYFIKEV----IREPVYVVGNSLGGFVAVYFAACN 277 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l----~~~~v~lvGhS~GG~val~~A~~~ 277 (451)
.+..+.+++...++.+ ...++++.||||||.+|..+|...
T Consensus 114 ~~~~l~~~~~~~l~~~~~~~p~~~i~~~GHSLGgalA~l~a~~l 157 (269)
T 1tgl_A 114 SYGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATALLCALDL 157 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCceEEEEeeCHHHHHHHHHHHHH
Confidence 3445555555555443 334599999999999999988766
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=96.28 E-value=0.0052 Score=56.55 Aligned_cols=52 Identities=19% Similarity=0.068 Sum_probs=35.1
Q ss_pred CHHHHHHHHHHHHHHh----CCCCEEEEEeCcchHHHHHHHHhCCC---ccceEEEecc
Q 013006 238 SVDLWQDQVCYFIKEV----IREPVYVVGNSLGGFVAVYFAACNPH---LVKGVTLLNA 289 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l----~~~~v~lvGhS~GG~val~~A~~~P~---~v~~lvl~~~ 289 (451)
....+.+++..+++.+ ...++++.||||||.+|..++..... .+..+++-+|
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~GHSLGGalA~l~a~~l~~~~~~~~~~tfg~P 174 (269)
T 1tib_A 116 SWRSVADTLRQKVEDAVREHPDYRVVFTGHSLGGALATVAGADLRGNGYDIDVFSYGAP 174 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHHTTSSSCEEEEEESCC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCceEEEecCChHHHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 3445556666666554 34689999999999999999987643 2554444433
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* | Back alignment and structure |
|---|
Probab=96.04 E-value=0.0083 Score=50.05 Aligned_cols=55 Identities=16% Similarity=0.108 Sum_probs=47.4
Q ss_pred CCCCEEEEeeCCCCCCChHHHHHHHHHCC------------------------CCcEEEeCCCCCCccccChHHHHhhh
Q 013006 396 NGVPICLIYGKEDPWVKPVWGLQVKRQVP------------------------EAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 396 i~~PvLii~G~~D~~v~~~~~~~l~~~lp------------------------~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
-.++|||..|+.|.+++....+.+.+.+. +..+..+.+|||....++|++..+.|
T Consensus 63 ~girvlIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP~~a~~m~ 141 (153)
T 1whs_B 63 AGLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEVPLHRPRQALVLF 141 (153)
T ss_dssp TTCEEEEEEETTCSSSCHHHHHHHHHTTTCCEEEEEEEEEETTEEEEEEEEETTEEEEEETTCCSSHHHHSHHHHHHHH
T ss_pred cCceEEEEecCcCcccccHhHHHHHHhCCCCCcccccceeECCCccEEEEEeCeEEEEEECCCcccCcccCHHHHHHHH
Confidence 47899999999999999988888877774 56788899999999999999876554
|
| >1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A | Back alignment and structure |
|---|
Probab=95.61 E-value=0.015 Score=53.36 Aligned_cols=39 Identities=23% Similarity=0.166 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHH----hCCCCEEEEEeCcchHHHHHHHHhC
Q 013006 239 VDLWQDQVCYFIKE----VIREPVYVVGNSLGGFVAVYFAACN 277 (451)
Q Consensus 239 ~~~~a~dv~~ll~~----l~~~~v~lvGhS~GG~val~~A~~~ 277 (451)
...+.+++...++. ....++++.||||||.+|..++...
T Consensus 116 ~~~~~~~~~~~l~~~~~~~~~~~i~vtGHSLGGalA~l~a~~~ 158 (269)
T 1lgy_A 116 YEQVVNDYFPVVQEQLTAHPTYKVIVTGHSLGGAQALLAGMDL 158 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHHH
Confidence 33444455444444 3456899999999999999888765
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=95.39 E-value=0.016 Score=53.51 Aligned_cols=39 Identities=33% Similarity=0.280 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHH----hCCCCEEEEEeCcchHHHHHHHHhCC
Q 013006 240 DLWQDQVCYFIKE----VIREPVYVVGNSLGGFVAVYFAACNP 278 (451)
Q Consensus 240 ~~~a~dv~~ll~~----l~~~~v~lvGhS~GG~val~~A~~~P 278 (451)
..+.+++...++. ....++++.||||||.+|..+|....
T Consensus 117 ~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l~ 159 (279)
T 1tia_A 117 KLVRDDIIKELKEVVAQNPNYELVVVGHSLGAAVATLAATDLR 159 (279)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHH
Confidence 3344444444443 34468999999999999999988754
|
| >3hc7_A Gene 12 protein, GP12; alpha/beta sandwich, cell adhesion; 2.00A {Mycobacterium phage D29} | Back alignment and structure |
|---|
Probab=95.32 E-value=0.13 Score=46.35 Aligned_cols=53 Identities=19% Similarity=0.075 Sum_probs=37.0
Q ss_pred CHHHHHHHHHHHHHHh----CCCCEEEEEeCcchHHHHHHHHh-----------CCCccceEEEeccC
Q 013006 238 SVDLWQDQVCYFIKEV----IREPVYVVGNSLGGFVAVYFAAC-----------NPHLVKGVTLLNAT 290 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l----~~~~v~lvGhS~GG~val~~A~~-----------~P~~v~~lvl~~~~ 290 (451)
+..+=++++...++.. ...+++|+|+|.|+.++-.++.. ..++|+++++++-+
T Consensus 52 S~~~G~~~~~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~l~~~i~~~~g~~~~~~~~V~avvlfGdP 119 (254)
T 3hc7_A 52 SVEKGVAELILQIELKLDADPYADFAMAGYSQGAIVVGQVLKHHILPPTGRLHRFLHRLKKVIFWGNP 119 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCCEEEEEETHHHHHHHHHHHHHTSSTTCTTGGGGGGEEEEEEESCT
T ss_pred hHHHHHHHHHHHHHHHHhhCCCCeEEEEeeCchHHHHHHHHHhhccCCCCCchhhhhhEEEEEEEeCC
Confidence 3344444554444443 45789999999999999887654 23579999999854
|
| >1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A* | Back alignment and structure |
|---|
Probab=94.95 E-value=0.026 Score=51.53 Aligned_cols=43 Identities=23% Similarity=0.147 Sum_probs=28.7
Q ss_pred HHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCC---CccceEEEecc
Q 013006 246 VCYFIKEVIREPVYVVGNSLGGFVAVYFAACNP---HLVKGVTLLNA 289 (451)
Q Consensus 246 v~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P---~~v~~lvl~~~ 289 (451)
+..+++.....++++.||||||.+|..+|.... .+|. ++..++
T Consensus 115 l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l~~~~~~v~-~~tFg~ 160 (261)
T 1uwc_A 115 VKQQASQYPDYALTVTGHSLGASMAALTAAQLSATYDNVR-LYTFGE 160 (261)
T ss_dssp HHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHTTCSSEE-EEEESC
T ss_pred HHHHHHHCCCceEEEEecCHHHHHHHHHHHHHhccCCCeE-EEEecC
Confidence 333444444568999999999999998887632 3455 444443
|
| >3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A* | Back alignment and structure |
|---|
Probab=94.89 E-value=0.062 Score=49.51 Aligned_cols=49 Identities=22% Similarity=0.121 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHh----CCCccceEEEecc
Q 013006 241 LWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAAC----NPHLVKGVTLLNA 289 (451)
Q Consensus 241 ~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~----~P~~v~~lvl~~~ 289 (451)
++.+.+..+++.....++++.|||+||.+|..+|.. .|.....++..++
T Consensus 123 ~~~~~l~~~~~~~p~~~l~vtGHSLGGalA~l~a~~l~~~~~~~~~~~~tfg~ 175 (279)
T 3uue_A 123 DIFTAVKKYKKEKNEKRVTVIGHSLGAAMGLLCAMDIELRMDGGLYKTYLFGL 175 (279)
T ss_dssp HHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHHHHHSTTCCSEEEEESC
T ss_pred HHHHHHHHHHHhCCCceEEEcccCHHHHHHHHHHHHHHHhCCCCceEEEEecC
Confidence 344455555555566789999999999999988764 3444555555554
|
| >3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum} | Back alignment and structure |
|---|
Probab=94.70 E-value=0.034 Score=50.67 Aligned_cols=35 Identities=23% Similarity=0.214 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHh
Q 013006 242 WQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 242 ~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~ 276 (451)
+.+.+..+++.....++++.|||+||.+|..+|..
T Consensus 110 ~~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~ 144 (258)
T 3g7n_A 110 IITEVKALIAKYPDYTLEAVGHSLGGALTSIAHVA 144 (258)
T ss_dssp HHHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCeEEEeccCHHHHHHHHHHHH
Confidence 34445555555556789999999999999887764
|
| >3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=94.22 E-value=0.048 Score=50.84 Aligned_cols=37 Identities=24% Similarity=0.259 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhC
Q 013006 241 LWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACN 277 (451)
Q Consensus 241 ~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~ 277 (451)
.+.+.+..+++.....++++.|||+||.+|..+|...
T Consensus 139 ~i~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l 175 (301)
T 3o0d_A 139 QIGPKLDSVIEQYPDYQIAVTGHSLGGAAALLFGINL 175 (301)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCceEEEeccChHHHHHHHHHHHH
Confidence 3444555555555667899999999999999888753
|
| >3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=94.06 E-value=0.043 Score=51.53 Aligned_cols=23 Identities=43% Similarity=0.391 Sum_probs=19.7
Q ss_pred CCCCEEEEEeCcchHHHHHHHHh
Q 013006 254 IREPVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 254 ~~~~v~lvGhS~GG~val~~A~~ 276 (451)
...++++.|||+||.+|..+|..
T Consensus 134 p~~~i~vtGHSLGGAlA~L~a~~ 156 (319)
T 3ngm_A 134 PSFKVVSVGHSLGGAVATLAGAN 156 (319)
T ss_dssp TTCEEEEEEETHHHHHHHHHHHH
T ss_pred CCCceEEeecCHHHHHHHHHHHH
Confidence 44689999999999999988775
|
| >3qpa_A Cutinase; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted; HET: MIR; 0.85A {Nectria haematococca} PDB: 3qpc_A* 1cex_A 1oxm_A* 1cui_A 1cus_A 2cut_A 1cuj_A 1cuy_A 1xzl_A* 1xzk_A* 1xzm_A* 1cuh_A 1cuu_A 3esc_A* 1cua_A* 3esa_A* 3esb_A* 3ef3_A* 3esd_A* 1cux_A ... | Back alignment and structure |
|---|
Probab=93.36 E-value=0.17 Score=43.65 Aligned_cols=52 Identities=12% Similarity=-0.010 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCC----CccceEEEeccC
Q 013006 239 VDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNP----HLVKGVTLLNAT 290 (451)
Q Consensus 239 ~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P----~~v~~lvl~~~~ 290 (451)
..++.+.|......-...+++|+|+|.|+.++-.++...| ++|.++++++-+
T Consensus 80 ~~~~~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP 135 (197)
T 3qpa_A 80 IREMLGLFQQANTKCPDATLIAGGYXQGAALAAASIEDLDSAIRDKIAGTVLFGYT 135 (197)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESCT
T ss_pred HHHHHHHHHHHHHhCCCCcEEEEecccccHHHHHHHhcCCHhHHhheEEEEEeeCC
Confidence 4445555555555556688999999999999988877665 689999999854
|
| >4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B* | Back alignment and structure |
|---|
Probab=92.64 E-value=0.36 Score=40.00 Aligned_cols=61 Identities=16% Similarity=0.091 Sum_probs=46.2
Q ss_pred hhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC-----------------------------CCcEEEeCCCCCCccc
Q 013006 390 LSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP-----------------------------EAPYYEISPAGHCPHD 440 (451)
Q Consensus 390 ~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp-----------------------------~~~~~~i~~~gH~~~~ 440 (451)
...|..-.++|||..|+.|.+++....+.+.+.+. +..+..+.+|||....
T Consensus 56 ~~~Ll~~girVliy~Gd~D~icn~~G~~~~i~~L~w~~~~~~~~w~~~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~ 135 (155)
T 4az3_B 56 LKLLSSQKYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPT 135 (155)
T ss_dssp HHHHHTCCCEEEEEEETTCSSSCHHHHHHHHHHTCCSSCCCCEEEEEEETTTEEEEEEEEEEETTEEEEEETTCCSCHHH
T ss_pred HHHHHHcCceEEEEecccCcccCcHhHHHHHHhcccccccccccceeecccCCCEEEEEEEEeCCEEEEEECCCcCcChh
Confidence 33444457899999999999999887777666542 1235678899999999
Q ss_pred cChHHHHhhh
Q 013006 441 EVPEVCSLCL 450 (451)
Q Consensus 441 e~p~~v~~~I 450 (451)
++|++..+.|
T Consensus 136 dqP~~al~m~ 145 (155)
T 4az3_B 136 DKPLAAFTMF 145 (155)
T ss_dssp HCHHHHHHHH
T ss_pred hCHHHHHHHH
Confidence 9999876543
|
| >3dcn_A Cutinase, cutin hydrolase; catalytic triad, secreted, serine esterase; 1.90A {Glomerella cingulata} SCOP: c.69.1.0 PDB: 3dd5_A 3dea_A* | Back alignment and structure |
|---|
Probab=91.54 E-value=0.26 Score=42.71 Aligned_cols=52 Identities=17% Similarity=0.088 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCC----CccceEEEeccC
Q 013006 239 VDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNP----HLVKGVTLLNAT 290 (451)
Q Consensus 239 ~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P----~~v~~lvl~~~~ 290 (451)
..++.+.|.....+-...+++|+|+|.|+.++-.++...| ++|.++++++-+
T Consensus 88 ~~~~~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP 143 (201)
T 3dcn_A 88 INEARRLFTLANTKCPNAAIVSGGYSQGTAVMAGSISGLSTTIKNQIKGVVLFGYT 143 (201)
T ss_dssp HHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHTTSCHHHHHHEEEEEEETCT
T ss_pred HHHHHHHHHHHHHhCCCCcEEEEeecchhHHHHHHHhcCChhhhhheEEEEEeeCc
Confidence 4455555555555556689999999999999988776655 589999999854
|
| >1g66_A Acetyl xylan esterase II; serine hydrolase, acetyl xylopyranose, hydrolase; 0.90A {Penicillium purpurogenum} SCOP: c.69.1.30 PDB: 1bs9_A 2axe_A* | Back alignment and structure |
|---|
Probab=90.55 E-value=0.38 Score=42.03 Aligned_cols=50 Identities=16% Similarity=0.139 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHH----hCCCCEEEEEeCcchHHHHHHHH--------------hCC----CccceEEEeccC
Q 013006 241 LWQDQVCYFIKE----VIREPVYVVGNSLGGFVAVYFAA--------------CNP----HLVKGVTLLNAT 290 (451)
Q Consensus 241 ~~a~dv~~ll~~----l~~~~v~lvGhS~GG~val~~A~--------------~~P----~~v~~lvl~~~~ 290 (451)
+=++++...++. -...+++|+|+|.|+.++-.++. ..| ++|+++++++-+
T Consensus 63 ~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~~~~~~~~i~~~~~~l~~~~~~~V~avvlfGdP 134 (207)
T 1g66_A 63 QGIAAVASAVNSFNSQCPSTKIVLVGYSQGGEIMDVALCGGGDPNQGYTNTAVQLSSSAVNMVKAAIFMGDP 134 (207)
T ss_dssp HHHHHHHHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCT
T ss_pred HHHHHHHHHHHHHHHhCCCCcEEEEeeCchHHHHHHHHhcccccccccccCCCCCChhhhccEEEEEEEcCC
Confidence 334444444443 34578999999999999987764 122 578999999864
|
| >1qoz_A AXE, acetyl xylan esterase; hydrolase, xylan degradation; HET: NAG; 1.90A {Trichoderma reesei} SCOP: c.69.1.30 | Back alignment and structure |
|---|
Probab=89.72 E-value=0.48 Score=41.34 Aligned_cols=47 Identities=15% Similarity=0.115 Sum_probs=32.6
Q ss_pred HHHHHHHHHhCCCCEEEEEeCcchHHHHHHHH--------------hCC----CccceEEEeccC
Q 013006 244 DQVCYFIKEVIREPVYVVGNSLGGFVAVYFAA--------------CNP----HLVKGVTLLNAT 290 (451)
Q Consensus 244 ~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~--------------~~P----~~v~~lvl~~~~ 290 (451)
+.|....+.-...+++|+|+|.|+.++-.++. ..| ++|+++++++-+
T Consensus 70 ~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~~~~~~~~i~~~~~~l~~~~~~~V~avvlfGdP 134 (207)
T 1qoz_A 70 AAINNFHNSCPDTQLVLVGYSQGAQIFDNALCGGGDPGEGITNTAVPLTAGAVSAVKAAIFMGDP 134 (207)
T ss_dssp HHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCT
T ss_pred HHHHHHHhhCCCCcEEEEEeCchHHHHHHHHhccCcccccccCCCCCCChHHhccEEEEEEEcCC
Confidence 33333333334578999999999999987764 122 478999999853
|
| >1gxs_B P-(S)-hydroxymandelonitrIle lyase chain B; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=89.62 E-value=0.62 Score=38.69 Aligned_cols=55 Identities=18% Similarity=0.188 Sum_probs=43.5
Q ss_pred CCCCEEEEeeCCCCCCChHHHHHHHHHCC---------------------------CCcEEEeCCCCCCccccChHHHHh
Q 013006 396 NGVPICLIYGKEDPWVKPVWGLQVKRQVP---------------------------EAPYYEISPAGHCPHDEVPEVCSL 448 (451)
Q Consensus 396 i~~PvLii~G~~D~~v~~~~~~~l~~~lp---------------------------~~~~~~i~~~gH~~~~e~p~~v~~ 448 (451)
-.++|||..|+.|.+++....+.+.+.+. +..+..+.+|||....++|++..+
T Consensus 65 ~girVliysGd~D~i~~~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~al~ 144 (158)
T 1gxs_B 65 AGLRVWVYSGDTDSVVPVSSTRRSLAALELPVKTSWYPWYMAPTEREVGGWSVQYEGLTYVTVRGAGHLVPVHRPAQAFL 144 (158)
T ss_dssp TTCEEEEEEETTCSSSCHHHHHHHHHTTCCCEEEEEEEEESSTTCCSEEEEEEEETTEEEEEETTCCSSHHHHCHHHHHH
T ss_pred cCCeEEEEecccCccCCcHHHHHHHHHCCCcccCCccceEECCCCCcccceEEEeCCEEEEEECCCcccCcccCcHHHHH
Confidence 47899999999999999887777666542 124667889999999999997655
Q ss_pred hh
Q 013006 449 CL 450 (451)
Q Consensus 449 ~I 450 (451)
.|
T Consensus 145 m~ 146 (158)
T 1gxs_B 145 LF 146 (158)
T ss_dssp HH
T ss_pred HH
Confidence 43
|
| >3qpd_A Cutinase 1; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted, phosphorylated Ser residue; HET: SEP; 1.57A {Aspergillus oryzae} PDB: 3gbs_A | Back alignment and structure |
|---|
Probab=89.53 E-value=0.5 Score=40.38 Aligned_cols=49 Identities=20% Similarity=0.065 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCC----CccceEEEeccC
Q 013006 242 WQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNP----HLVKGVTLLNAT 290 (451)
Q Consensus 242 ~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P----~~v~~lvl~~~~ 290 (451)
..+.+....+.-...+++|+|+|.|+.++-.++...| ++|+++++++-+
T Consensus 79 ~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP 131 (187)
T 3qpd_A 79 AQGLFEQAVSKCPDTQIVAGGYSQGTAVMNGAIKRLSADVQDKIKGVVLFGYT 131 (187)
T ss_dssp HHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHTTSCHHHHHHEEEEEEESCT
T ss_pred HHHHHHHHHHhCCCCcEEEEeeccccHHHHhhhhcCCHhhhhhEEEEEEeeCC
Confidence 3333334444445678999999999999988876655 579999999854
|
| >2czq_A Cutinase-like protein; alpha/beta hydrolase fold, hydrolase; HET: CIT; 1.05A {Cryptococcus SP} | Back alignment and structure |
|---|
Probab=87.95 E-value=0.52 Score=41.05 Aligned_cols=51 Identities=18% Similarity=0.035 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhC--C----CccceEEEecc
Q 013006 239 VDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACN--P----HLVKGVTLLNA 289 (451)
Q Consensus 239 ~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~--P----~~v~~lvl~~~ 289 (451)
..++.+.|....++-...+++|+|+|.|+.++-.++... | ++|++++|++-
T Consensus 60 ~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~lg~~~~~~~~V~avvlfGd 116 (205)
T 2czq_A 60 TADIIRRINSGLAANPNVCYILQGYSQGAAATVVALQQLGTSGAAFNAVKGVFLIGN 116 (205)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHCSSSHHHHHEEEEEEESC
T ss_pred HHHHHHHHHHHHhhCCCCcEEEEeeCchhHHHHHHHHhccCChhhhhhEEEEEEEeC
Confidence 344444444444444567899999999999988877654 4 47999999984
|
| >3aja_A Putative uncharacterized protein; alpha-beta hydrolase, serine esterase, cutinase, lipase, HYD; 2.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=86.52 E-value=0.98 Score=41.79 Aligned_cols=51 Identities=22% Similarity=0.182 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHh----CCCCEEEEEeCcchHHHHHHHHh--------CCCccceEEEeccC
Q 013006 240 DLWQDQVCYFIKEV----IREPVYVVGNSLGGFVAVYFAAC--------NPHLVKGVTLLNAT 290 (451)
Q Consensus 240 ~~~a~dv~~ll~~l----~~~~v~lvGhS~GG~val~~A~~--------~P~~v~~lvl~~~~ 290 (451)
.+=++++...++.. ...+++|+|+|.|+.++-.++.. .+++|++++|++-.
T Consensus 113 ~~G~~~~~~~i~~~~~~CP~TkiVL~GYSQGA~V~~~~~~~i~~g~~~~~~~~V~aVvLfGdP 175 (302)
T 3aja_A 113 AEGMRTTVKAMTDMNDRCPLTSYVIAGFSQGAVIAGDIASDIGNGRGPVDEDLVLGVTLIADG 175 (302)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHHTTCSSSCGGGEEEEEEESCT
T ss_pred HHHHHHHHHHHHHHHhhCCCCcEEEEeeCchHHHHHHHHHhccCCCCCCChHHEEEEEEEeCC
Confidence 33334444444433 45789999999999998877642 34789999999853
|
| >2ory_A Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Photobacterium SP} | Back alignment and structure |
|---|
Probab=85.93 E-value=0.45 Score=45.16 Aligned_cols=22 Identities=27% Similarity=0.442 Sum_probs=19.2
Q ss_pred CCCEEEEEeCcchHHHHHHHHh
Q 013006 255 REPVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 255 ~~~v~lvGhS~GG~val~~A~~ 276 (451)
..++++.|||+||.+|..+|..
T Consensus 165 ~~~i~vtGHSLGGAlA~l~a~~ 186 (346)
T 2ory_A 165 KAKICVTGHSKGGALSSTLALW 186 (346)
T ss_dssp CEEEEEEEETHHHHHHHHHHHH
T ss_pred CceEEEecCChHHHHHHHHHHH
Confidence 4679999999999999988875
|
| >2yij_A Phospholipase A1-iigamma; hydrolase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=85.75 E-value=0.16 Score=49.24 Aligned_cols=38 Identities=21% Similarity=0.209 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhC
Q 013006 240 DLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACN 277 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~ 277 (451)
+.+.+.|..+++.... .++++.|||+||.+|..+|...
T Consensus 210 ~~Vl~~l~~ll~~yp~~~~~I~vTGHSLGGALA~L~A~~L 249 (419)
T 2yij_A 210 DQVLREVGRLLEKYKDEEVSITICGHSLGAALATLSATDI 249 (419)
Confidence 3445556666665543 4799999999999999888654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 451 | ||||
| d1azwa_ | 313 | c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas | 7e-16 | |
| d1q0ra_ | 297 | c.69.1.28 (A:) Aclacinomycin methylesterase RdmC { | 2e-15 | |
| d1bn7a_ | 291 | c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus | 3e-15 | |
| d1pjaa_ | 268 | c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {H | 6e-15 | |
| d2rhwa1 | 283 | c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2 | 1e-14 | |
| d1zd3a2 | 322 | c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, | 2e-14 | |
| d1k8qa_ | 377 | c.69.1.6 (A:) Gastric lipase {Dog (Canis familiari | 7e-14 | |
| d1wm1a_ | 313 | c.69.1.7 (A:) Proline aminopeptidase {Serratia mar | 7e-14 | |
| d1uk8a_ | 271 | c.69.1.10 (A:) Meta-cleavage product hydrolase Cum | 1e-13 | |
| d1m33a_ | 256 | c.69.1.26 (A:) Biotin biosynthesis protein BioH {E | 1e-13 | |
| d1mj5a_ | 298 | c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomona | 9e-13 | |
| d1xkla_ | 258 | c.69.1.20 (A:) Salicylic acid-binding protein 2 (S | 2e-11 | |
| d1ehya_ | 293 | c.69.1.11 (A:) Bacterial epoxide hydrolase {Agroba | 3e-11 | |
| d1mtza_ | 290 | c.69.1.7 (A:) Tricorn interacting factor F1 {Archa | 7e-11 | |
| d3c70a1 | 256 | c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber t | 8e-11 | |
| d1j1ia_ | 268 | c.69.1.10 (A:) Meta cleavage compound hydrolase Ca | 8e-11 | |
| d1c4xa_ | 281 | c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-di | 5e-10 | |
| d1r3da_ | 264 | c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio | 2e-09 | |
| d1b6ga_ | 310 | c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacte | 6e-09 | |
| d1a8qa_ | 274 | c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces au | 2e-08 | |
| d1cvla_ | 319 | c.69.1.18 (A:) Lipase {Chromobacterium viscosum [T | 3e-08 | |
| d1a88a_ | 275 | c.69.1.12 (A:) Chloroperoxidase L {Streptomyces li | 3e-08 | |
| d1a8sa_ | 273 | c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas flu | 4e-08 | |
| d1hkha_ | 279 | c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. | 4e-08 | |
| d1ex9a_ | 285 | c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [Tax | 4e-08 | |
| d1tcaa_ | 317 | c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Cand | 4e-07 | |
| d1brta_ | 277 | c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces au | 5e-07 | |
| d1va4a_ | 271 | c.69.1.12 (A:) Arylesterase {Pseudomonas fluoresce | 1e-06 | |
| d1xkta_ | 286 | c.69.1.22 (A:) Fatty acid synthase {Human (Homo sa | 2e-06 | |
| d1thta_ | 302 | c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase | 3e-06 | |
| d3b5ea1 | 209 | c.69.1.14 (A:7-215) Uncharacterized protein Mll837 | 2e-05 | |
| d2r8ba1 | 203 | c.69.1.14 (A:44-246) Uncharacterized protein Atu24 | 5e-05 | |
| d1ispa_ | 179 | c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: | 1e-04 | |
| d1qo7a_ | 394 | c.69.1.11 (A:) Bacterial epoxide hydrolase {Asperg | 5e-04 |
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Score = 76.0 bits (185), Expect = 7e-16
Identities = 48/307 (15%), Positives = 91/307 (29%), Gaps = 43/307 (14%)
Query: 147 VHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPT 206
+++E+ G N + PV+ L G G + + + YR D G G S
Sbjct: 24 LYFEQCG--NPHGKPVVMLHGGPGGGCNDKMRRFHDPAKYRIVLFDQRGSGRS------- 74
Query: 207 PRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLG 266
P A + + + + + V G S G
Sbjct: 75 ----------------------TPHADLVDNTTWDLVADIERLRTHLGVDRWQVFGGSWG 112
Query: 267 GFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIE 326
+A+ +A +P V + L F +R+ P + L A
Sbjct: 113 STLALAYAQTHPQQVTELVLRGIFLLRRFELEWFYQEGASRLFPDAWEHYLNAIPPVERA 172
Query: 327 FIWQKISDPESIAEVLKQVYADHATNVDTVFT-------RILETTQHPAAAASFASIMFA 379
+ + + ++ A A +V T + + A +FA I
Sbjct: 173 DLMSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENH 232
Query: 380 PQGNLSFREALSRCQMN-----GVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPA 434
N F E + + +P +++G+ D + + P+A +
Sbjct: 233 YFVNGGFFEVEDQLLRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAWPKAQLQISPAS 292
Query: 435 GHCPHDE 441
GH +
Sbjct: 293 GHSAFEP 299
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Score = 74.6 bits (181), Expect = 2e-15
Identities = 36/303 (11%), Positives = 69/303 (22%), Gaps = 34/303 (11%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKD--LGKDYRAWAIDFLGQGMSLPDE 203
+ + G + P +L + G + + + + D
Sbjct: 11 ELWSDDFG--DPADPALLLVMGGNLSALGWPDEFARRLADGGLHVIRYD----------- 57
Query: 204 DPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGN 263
G + Y + + +VVG
Sbjct: 58 -----------------HRDTGRSTTRDFAAHPYGFGELAADAVAVLDGWGVDRAHVVGL 100
Query: 264 SLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPK--LARILPWSGTFPLPASV 321
S+G + A + + +T+L I + G
Sbjct: 101 SMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLDA 160
Query: 322 RKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQ 381
L+ + + + ++ + D E A A
Sbjct: 161 LALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYS 220
Query: 382 GNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDE 441
L + + VP +I + DP G + +P A EI GH
Sbjct: 221 LTLPPPSRAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLIPTARLAEIPGMGHALPSS 280
Query: 442 VPE 444
V
Sbjct: 281 VHG 283
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Score = 73.7 bits (179), Expect = 3e-15
Identities = 46/312 (14%), Positives = 91/312 (29%), Gaps = 45/312 (14%)
Query: 139 WEWKPKF------NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAID 192
+ + P + +HY G + PVLFL G S+ + + + +R A D
Sbjct: 5 FPFDPHYVEVLGERMHYVDVG--PRDGTPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPD 62
Query: 193 FLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKE 252
+G G +L Y D + FI+
Sbjct: 63 LIGMGK-------------------------------SDKPDLDYFFDDHVRYLDAFIEA 91
Query: 253 VIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWS 312
+ E V +V + G + ++A NP VKG+ F + +
Sbjct: 92 LGLEEVVLVIHDWGSALGFHWAKRNPERVKGIAC------MEFIRPIPTWDEWPEFARET 145
Query: 313 GTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAAS 372
A V + + + V++ + + F + ++
Sbjct: 146 FQAFRTADVGRELIIDQNAFIEGVLPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNE 205
Query: 373 FASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEIS 432
++ + VP L +G + P ++ +P +I
Sbjct: 206 IPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAESLPNCKTVDIG 265
Query: 433 PAGHCPHDEVPE 444
P H ++ P+
Sbjct: 266 PGLHYLQEDNPD 277
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.4 bits (176), Expect = 6e-15
Identities = 32/291 (10%), Positives = 69/291 (23%), Gaps = 38/291 (13%)
Query: 159 SPPVLFLPGFGVGSFHYEKQ---LKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDST 215
PV+ + G S+ + + + +D SL
Sbjct: 2 YKPVIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRP------------- 48
Query: 216 EEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAA 275
L V +++ V + + + V+++ S GG V +
Sbjct: 49 -------------------LWEQVQGFREAVVPIMAK-APQGVHLICYSQGGLVCRALLS 88
Query: 276 CNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDP 335
+ ++P G + L S + + S I DP
Sbjct: 89 VMDDHNVDSFISLSSPQMGQYGDTDYLKWLFPTSMRSNLYRICYSPWGQEFSICNYWHDP 148
Query: 336 ESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQM 395
L N + ++ I G ++ ++ S
Sbjct: 149 HHDDLYLNASSFLALINGERDHPNATVWRKNFLRVGHLVLIGGPDDGVITPWQS-SFFGF 207
Query: 396 NGVPICLIYGKEDPWVKPVW-GLQVKRQVPEAPYYEISPAGHCPHDEVPEV 445
++ +E GL+ ++ H +
Sbjct: 208 YDANETVLEMEEQLVYLRDSFGLKTLLARGAIVRCPMAGISHTAWHSNRTL 258
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Score = 71.8 bits (174), Expect = 1e-14
Identities = 46/304 (15%), Positives = 88/304 (28%), Gaps = 57/304 (18%)
Query: 145 FNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLG----KDYRAWAIDFLGQGMSL 200
FN+HY +AG N V+ L G G G+ + +++G YR D
Sbjct: 20 FNIHYNEAG----NGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDS------- 68
Query: 201 PDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYV 260
G + V + + + ++
Sbjct: 69 -----------------------PGFNKSDAVVMDEQRGLVNARAVKGLMDALDIDRAHL 105
Query: 261 VGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPAS 320
VGN++GG A+ FA P + + L+ P+ + +
Sbjct: 106 VGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETL 165
Query: 321 VRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAP 380
+ L F++ + E + + + S AP
Sbjct: 166 KQMLQVFLYDQSLITEELLQGRWEAIQRQ----------------PEHLKNFLISAQKAP 209
Query: 381 QGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHD 440
L + + +G++D +V GL++ + +A + S GH
Sbjct: 210 LSTWDVTARLGEIK---AKTFITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGHWAQW 266
Query: 441 EVPE 444
E +
Sbjct: 267 EHAD 270
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 71.8 bits (174), Expect = 2e-14
Identities = 48/331 (14%), Positives = 103/331 (31%), Gaps = 51/331 (15%)
Query: 132 APITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWA 190
+ ++ + KP+ +H+ + G + P V GF + + Q+ L + YR A
Sbjct: 9 SDMSHGYVTVKPRVRLHFVELG----SGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLA 64
Query: 191 IDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFI 250
+D G ++ Y +++ ++ F+
Sbjct: 65 MDMKGY-----------------------------GESSAPPEIEEYCMEVLCKEMVTFL 95
Query: 251 KEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGF-SPNPIRSPKLARIL 309
++ +G+ GG + Y A P V+ V LN + +P+ S K +
Sbjct: 96 DKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVF 155
Query: 310 PWSGTFPLPASVRKLIEFIWQKI---------SDPESIAEVLKQVYADHATNVDTVFTRI 360
+ F P +E + S+ +V + + + +R+
Sbjct: 156 DYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRM 215
Query: 361 LETTQHPAAAASFASIMFAPQGN-------LSFREALSRCQMNGVPICLIYGKEDPWVKP 413
+ + F F N S + +P ++ ++D + P
Sbjct: 216 VTEEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVP 275
Query: 414 VWGLQVKRQVPEAPYYEISPAGHCPHDEVPE 444
++ +P I GH + P
Sbjct: 276 QMSQHMEDWIPHLKRGHIEDCGHWTQMDKPT 306
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} Length = 377 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Score = 70.5 bits (171), Expect = 7e-14
Identities = 45/340 (13%), Positives = 93/340 (27%), Gaps = 56/340 (16%)
Query: 145 FNVHYEKAGCENVNS-PPVLFLPGFGVGSFHYEKQLKDLG-------KDYRAWAIDFLGQ 196
+ Y + EN+ P G + ++ L + Y W + G
Sbjct: 43 DRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGN 102
Query: 197 GMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIRE 256
+ + +P S E S + + + +K+ ++
Sbjct: 103 TWARRNLYYSPDSVEFW-----------------AFSFDEMAKYDLPATIDFILKKTGQD 145
Query: 257 PVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT-PFWGFSPNPIRSPKLARILPWSGTF 315
++ VG+S G + + NP L K + A P KL + +
Sbjct: 146 KLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKL 205
Query: 316 PLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHP-------- 367
+ F Q ++ E + + ++ + T L ++
Sbjct: 206 IFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHNPA 265
Query: 368 --------AAAASFASIMFAPQGNLSFREALSRCQMNG----------VPICLIYGKEDP 409
+ + S F S + + + VPI + G D
Sbjct: 266 GTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDL 325
Query: 410 WVKPVWGLQVKRQVPEAPYYEISP-AGHCPH---DEVPEV 445
P + ++P Y+ P H + P+
Sbjct: 326 LADPHDVDLLLSKLPNLIYHRKIPPYNHLDFIWAMDAPQA 365
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Score = 69.9 bits (169), Expect = 7e-14
Identities = 48/320 (15%), Positives = 93/320 (29%), Gaps = 42/320 (13%)
Query: 133 PITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAID 192
S + + +++E +G N N P +F+ G G + + Y+ D
Sbjct: 10 AYDSGWLDTGDGHRIYWELSG--NPNGKPAVFIHGGPGGGISPHHRQLFDPERYKVLLFD 67
Query: 193 FLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKE 252
G G + + + L D
Sbjct: 68 ----------------------------QRGCGRSRPHASLDNNTTWHLVADIERLREMA 99
Query: 253 VIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWS 312
+ + + G+ G +A+ +A +P V + L + +R P
Sbjct: 100 GVEQWLVFGGSW-GSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEK 158
Query: 313 GTFPLPASVRK------LIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQH 366
L +DP+ E K V + +R +
Sbjct: 159 WERVLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGE 218
Query: 367 PAAAASFASIMFAPQGNLSFREALSRCQMN-----GVPICLIYGKEDPWVKPVWGLQVKR 421
A +FA I +L F E+ + N +P +++G+ D + + +
Sbjct: 219 DDFALAFARIENHYFTHLGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAK 278
Query: 422 QVPEAPYYEISPAGHCPHDE 441
PEA + + AGH +
Sbjct: 279 AWPEAELHIVEGAGHSYDEP 298
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Score = 68.7 bits (166), Expect = 1e-13
Identities = 56/304 (18%), Positives = 92/304 (30%), Gaps = 64/304 (21%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYE---KQLKDLGKDYRAWAIDFLGQGMSLPD 202
+Y G PV+ + G G G Y + L K YR A D +G G
Sbjct: 14 LTNYHDVG----EGQPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGF---- 65
Query: 203 EDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVG 262
YS D W D + + + E ++VG
Sbjct: 66 --------------------------TDRPENYNYSKDSWVDHIIGIMDALEIEKAHIVG 99
Query: 263 NSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVR 322
N+ GG +A+ A V + G V
Sbjct: 100 NAFGGGLAIATALRYSERV-------------------------DRMVLMGAAGTRFDVT 134
Query: 323 KLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQG 382
+ + +W E++ +L D + D + E + P SF+S+ P+
Sbjct: 135 EGLNAVWGYTPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQ 194
Query: 383 NLSFREALSRCQMNGVPIC--LIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHD 440
A S + +P +I+G+ED V L++ + A + GH
Sbjct: 195 RWIDALASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELIDRAQLHVFGRCGHWTQI 254
Query: 441 EVPE 444
E +
Sbjct: 255 EQTD 258
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Score = 68.3 bits (165), Expect = 1e-13
Identities = 40/299 (13%), Positives = 82/299 (27%), Gaps = 58/299 (19%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDP 205
N+ ++ G N ++ L G+G+ + + ++L + +D G G S
Sbjct: 1 NIWWQTKGQGN---VHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFGAL 57
Query: 206 TPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSL 265
+ + + + +G SL
Sbjct: 58 ------------------------------------SLADMAEAVLQQAPDKAIWLGWSL 81
Query: 266 GGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLI 325
GG VA A +P V+ + + ++P + +L R +
Sbjct: 82 GGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKP--DVLAGFQQQLSDDQQRTVE 139
Query: 326 EFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLS 385
F+ + E+ + + + P + +
Sbjct: 140 RFLALQTMGTETARQDARALKKTVL--------------ALPMPEVDVLNGGLEILKTVD 185
Query: 386 FREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPE 444
R+ L +P +YG D V + + P + Y + A H P P
Sbjct: 186 LRQPLQNVS---MPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISHPA 241
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Score = 66.4 bits (160), Expect = 9e-13
Identities = 33/299 (11%), Positives = 68/299 (22%), Gaps = 38/299 (12%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDP 205
+ Y G P+LF G S+ + + R A D +G G S +
Sbjct: 19 RMAYIDEG----TGDPILFQHGNPTSSYLWRNIMPHCAGLGRLIACDLIGMGDSDKLDPS 74
Query: 206 TPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSL 265
P + + + + V +V +
Sbjct: 75 GPERY--------------------------AYAEHRDYLDALWEALDLGDRVVLVVHDW 108
Query: 266 GGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLI 325
G + +A + V+G+ + A + + S
Sbjct: 109 GSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQAGEELV------ 162
Query: 326 EFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLS 385
+ +L+ + F E + + I P ++
Sbjct: 163 -LQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVA 221
Query: 386 FREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPE 444
+ L E + R P + H ++ P+
Sbjct: 222 IARDYAGWLSESPIPKLFINAEPGALTTGRMRDFCRTWPNQTEITV-AGAHFIQEDSPD 279
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Score = 61.9 bits (148), Expect = 2e-11
Identities = 40/294 (13%), Positives = 71/294 (24%), Gaps = 47/294 (15%)
Query: 160 PPVLFLPGFGVGSFHYEKQLKDLGKD-YRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEK 218
+ + G G + + K L ++ A+D G L +
Sbjct: 3 KHFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELR----------- 51
Query: 219 NFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNP 278
D + E V +VG+SLGG P
Sbjct: 52 ------------------TLYDYTLPLMELMESLSADEKVILVGHSLGGMNLGLAMEKYP 93
Query: 279 HLVKGVTLLNAT-PFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPES 337
+ L A P + + + R + E + P+
Sbjct: 94 QKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKF 153
Query: 338 IAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNG 397
+A L Q+ + + + R + A + + +
Sbjct: 154 LAHKLYQLCSPEDLALASSLVRPSSLFMEDLSKAKYFT----------------DERFGS 197
Query: 398 VPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCLL 451
V I ED + + + EI A H P+ LL
Sbjct: 198 VKRVYIVCTEDKGIPEEFQRWQIDNIGVTEAIEIKGADHMAMLCEPQKLCASLL 251
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Score = 61.5 bits (147), Expect = 3e-11
Identities = 39/301 (12%), Positives = 74/301 (24%), Gaps = 37/301 (12%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDP 205
+HY + G P +L L G+ + + K + L + Y D G G S
Sbjct: 19 KIHYVREG----AGPTLLLLHGWPGFWWEWSKVIGPLAEHYDVIVPDLRGFGDS------ 68
Query: 206 TPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSL 265
+ + + DKA + L ++ + + V
Sbjct: 69 -------EKPDLNDLSKYSLDKAADDQAALLDALGIEKAYVVGHDFAA------------ 109
Query: 266 GGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLI 325
V F V + + + V
Sbjct: 110 --IVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQLDMAVEVVGSS 167
Query: 326 EFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLS 385
+ +K + ++ P + A +
Sbjct: 168 REVCKKY-----FKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDA 222
Query: 386 FREALSRCQMNGVPICLIYGKEDPWVKPVWGLQ-VKRQVPEAPYYEISPAGHCPHDEVPE 444
M+ +P+ +I+G D V ++ V + I GH E PE
Sbjct: 223 ALWTDLDHTMSDLPVTMIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEKPE 282
Query: 445 V 445
+
Sbjct: 283 I 283
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 290 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 60.7 bits (145), Expect = 7e-11
Identities = 39/300 (13%), Positives = 84/300 (28%), Gaps = 37/300 (12%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKD-YRAWAIDFLGQGMSLPDED 204
++Y+ ++ + G S Y L+D+ K+ D G G S
Sbjct: 13 YIYYKLCKAPE-EKAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRS----- 66
Query: 205 PTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNS 264
+ ++ K E V+++G+S
Sbjct: 67 ------------------------EEPDQSKFTIDYGVEEAEALRSKLFGNEKVFLMGSS 102
Query: 265 LGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKL 324
GG +A+ +A +KG+ + G S P+ ++ R++ A +
Sbjct: 103 YGGALALAYAVKYQDHLKGLIV-----SGGLSSVPLTVKEMNRLIDELPAKYRDAIKKYG 157
Query: 325 IEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNL 384
++ E++ Q V + + F G +
Sbjct: 158 SSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTI 217
Query: 385 SFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPE 444
+ + +P + G+ D P + ++ + + H E E
Sbjct: 218 KDWDITDKISAIKIPTLITVGEYDEVT-PNVARVIHEKIAGSELHVFRDCSHLTMWEDRE 276
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Score = 59.9 bits (143), Expect = 8e-11
Identities = 33/291 (11%), Positives = 68/291 (23%), Gaps = 49/291 (16%)
Query: 163 LFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFL 221
+ + G++ + K L ++ A+D G+
Sbjct: 6 VLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVD---------------------- 43
Query: 222 WGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVY-VVGNSLGGFVAVYFAACNPHL 280
P E S D + + + F++ + +VG S GG A
Sbjct: 44 --------PRQIEEIGSFDEYSEPLLTFLEALPPGEKVILVGESCGGLNIAIAADKYCEK 95
Query: 281 VKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAE 340
+ N+ KL + P + E K+
Sbjct: 96 IAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLREN 155
Query: 341 VLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPI 400
+ + A Q L+ R ++ +
Sbjct: 156 LYTLCGPEEY-----------------ELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKK 198
Query: 401 CLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCLL 451
++ +D P + L Y++ H + + L
Sbjct: 199 IYVWTDQDEIFLPEFQLWQIENYKPDKVYKVEGGDHKLQLTKTKEIAEILQ 249
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Score = 60.2 bits (144), Expect = 8e-11
Identities = 46/313 (14%), Positives = 86/313 (27%), Gaps = 68/313 (21%)
Query: 141 WKPKF------NVHYEKAGCENVNSPPVLFLPGFGVGS---FHYEKQLKDLGKDYRAWAI 191
+ +F Y +AG PV+ + G G G+ ++ + L + YR A+
Sbjct: 2 YVERFVNAGGVETRYLEAG----KGQPVILIHGGGAGAESEGNWRNVIPILARHYRVIAM 57
Query: 192 DFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIK 251
D G + +
Sbjct: 58 DM------------------------------LGFGKTAKPDIEYTQDRRIRHLHDFIKA 87
Query: 252 EVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPW 311
V +VGNS+GG + + + LV +
Sbjct: 88 MNFDGKVSIVGNSMGGATGLGVSVLHSELVNALV-------------------------L 122
Query: 312 SGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAA 371
G+ L + + + I E + ++K + D D + A
Sbjct: 123 MGSAGLVVEIHEDLRPIINYDFTREGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRK 182
Query: 372 SFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEI 431
++ + M + + VP ++ GK+D V + + ++ Y I
Sbjct: 183 AYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLIDDSWGYII 242
Query: 432 SPAGHCPHDEVPE 444
GH E PE
Sbjct: 243 PHCGHWAMIEHPE 255
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Score = 58.0 bits (138), Expect = 5e-10
Identities = 51/302 (16%), Positives = 96/302 (31%), Gaps = 50/302 (16%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSF---HYEKQLKDLGKDYRAWAIDFLGQGMSLPD 202
H AG + SP V+ L G G G+ ++ + DL +++ A D +G
Sbjct: 15 ASHALVAG--DPQSPAVVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPDLIG------- 65
Query: 203 EDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVG 262
+G + + + + V + +Q+ + E ++VG
Sbjct: 66 -------------------FGQSEYPETYPGHIMSWVGMRVEQILGLMNHFGIEKSHIVG 106
Query: 263 NSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVR 322
NS+GG V + P V L+ +P R P+LAR+L + L
Sbjct: 107 NSMGGAVTLQLVVEAPERFDKVALMG----SVGAPMNARPPELARLLAFYADPRLTPYRE 162
Query: 323 KLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQG 382
+ F++ + P + V +R G
Sbjct: 163 LIHSFVYDPENFP---------------GMEEIVKSRFEVANDPEVRRIQEVMFESMKAG 207
Query: 383 NLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEV 442
S + + + +G++D V L + + + A + GH E
Sbjct: 208 MESLVIPPATLGRLPHDVLVFHGRQDRIVPLDTSLYLTKHLKHAELVVLDRCGHWAQLER 267
Query: 443 PE 444
+
Sbjct: 268 WD 269
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Score = 55.7 bits (132), Expect = 2e-09
Identities = 39/300 (13%), Positives = 80/300 (26%), Gaps = 57/300 (19%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDED 204
+H+ K +P V+ + G ++ L L + A +D G
Sbjct: 6 QLHFAKPTAR---TPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGH-------- 54
Query: 205 PTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNS 264
P ++ + + PV +VG S
Sbjct: 55 ----------------------GTNPERHCDNFAEAVEMIEQTVQAHVTSEVPVILVGYS 92
Query: 265 LGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKL 324
LGG + ++ A + + + +
Sbjct: 93 LGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHV 152
Query: 325 IEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNL 384
+ +Q+ E + + A + N+ + +L T
Sbjct: 153 LSDWYQQAVFSSLNHEQRQTLIAQRSANLGSSVAHMLLATSLA----------------- 195
Query: 385 SFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPE 444
L Q +PI + G++D + + + Y +++ AGH H E P+
Sbjct: 196 KQPYLLPALQALKLPIHYVCGEQDSKFQQLA------ESSGLSYSQVAQAGHNVHHEQPQ 249
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} Length = 310 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Score = 54.9 bits (130), Expect = 6e-09
Identities = 44/305 (14%), Positives = 78/305 (25%), Gaps = 40/305 (13%)
Query: 145 FNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKD-LGKDYRAWAIDFLGQGMSLPDE 203
HY G + L L G S+ Y K + R A DF G G S
Sbjct: 34 LRAHYLDEGNSD-AEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKS---- 88
Query: 204 DPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGN 263
E Y+ + ++ + I+ + + +V
Sbjct: 89 -------------------------DKPVDEEDYTFEFHRNFLLALIERLDLRNITLVVQ 123
Query: 264 SLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRK 323
GGF+ + +P K + ++NA P S + + +
Sbjct: 124 DWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPAFSAFVTQPADGFTAWKYDLVTPS 183
Query: 324 LIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGN 383
+ ++ E YA + + I
Sbjct: 184 DLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQACIDISTEAISF 243
Query: 384 LSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAP-YYEISPAGHCPHDEV 442
+ G +D + P +K + P EI+ AGH +
Sbjct: 244 --------WQNDWNGQTFMAIGMKDKLLGPDVMYPMKALINGCPEPLEIADAGHFVQEFG 295
Query: 443 PEVCS 447
+V
Sbjct: 296 EQVAR 300
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 53.0 bits (125), Expect = 2e-08
Identities = 43/301 (14%), Positives = 77/301 (25%), Gaps = 52/301 (17%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDED 204
+ Y+ G PV+F+ G+ + ++ QLK + YR A D G G
Sbjct: 10 EIFYKDWG----QGRPVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRGHGH------ 59
Query: 205 PTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNS 264
+ D +R+ V +
Sbjct: 60 ------------------------STPVWDGYDFDTFADDLNDLLTDLDLRDVTLVAHSM 95
Query: 265 LGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKL 324
GG +A Y ++ LL+A P + + L +
Sbjct: 96 GGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTERSQFW 155
Query: 325 IEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNL 384
+ S A+ N T + A G
Sbjct: 156 KDTAEGFFS-------------ANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYT 202
Query: 385 SFREALSRCQMNGVPICLIYGKEDPWVKP-VWGLQVKRQVPEAPYYEISPAGHCPHDEVP 443
F E L + + +++G +D V G + + +P A + H
Sbjct: 203 DFTEDLKKFDIP---TLVVHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAMVPG 259
Query: 444 E 444
+
Sbjct: 260 D 260
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} Length = 319 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Score = 52.9 bits (126), Expect = 3e-08
Identities = 30/192 (15%), Positives = 50/192 (26%), Gaps = 41/192 (21%)
Query: 160 PPVLFLPGFGVGS------FHYEKQLKDLGKD-YRAWAIDFLGQGMSLPDEDPTPRSKEG 212
PV+ + G ++ DL + + +
Sbjct: 9 YPVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVAN-------------------- 48
Query: 213 DSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVY 272
L GF P + V + V ++G+S GG + Y
Sbjct: 49 --------LSGFQSDDGPN-----GRGEQLLAYVKQVLAATGATKVNLIGHSQGGLTSRY 95
Query: 273 FAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKI 332
AA P LV VT + TP G L + + A V +
Sbjct: 96 VAAVAPQLVASVTTI-GTPHRGSEFADFVQDVLKTDPTGLSSTVIAAFVNVFGTLVSSSH 154
Query: 333 SDPESIAEVLKQ 344
+ + L+
Sbjct: 155 NTDQDALAALRT 166
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Score = 52.3 bits (123), Expect = 3e-08
Identities = 45/302 (14%), Positives = 77/302 (25%), Gaps = 49/302 (16%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDED 204
N+ Y+ G + PV+F G+ + + ++ Q+ YR A D G G
Sbjct: 10 NIFYKDWG--PRDGLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGR------ 61
Query: 205 PTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNS 264
S D +R V++ ++
Sbjct: 62 ------------------------SDQPSTGHDMDTYAADVAALTEALDLRGAVHIGHST 97
Query: 265 LGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKL 324
GG VA Y A P V L++A P + + +
Sbjct: 98 GGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAANRAQFY 157
Query: 325 IEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNL 384
I+ + Q DH A+ +
Sbjct: 158 IDVPSGPFYGFNREGATVSQGLIDH---------------WWLQGMMGAANAHYECIAAF 202
Query: 385 SFREALSRCQMNGVPICLIYGKEDPWVKPV-WGLQVKRQVPEAPYYEISPAGHCPHDEVP 443
S + + VP+ + +G +D V + + A H P
Sbjct: 203 SETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPHGMLSTHP 262
Query: 444 EV 445
EV
Sbjct: 263 EV 264
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Score = 52.2 bits (123), Expect = 4e-08
Identities = 39/301 (12%), Positives = 77/301 (25%), Gaps = 51/301 (16%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDED 204
++Y+ G + P++F G+ + + +E Q+ L + YR A D G G S
Sbjct: 10 QIYYKDWG----SGQPIVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWS 65
Query: 205 PTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNS 264
+ D + I+ + + G S
Sbjct: 66 GNDMDT-------------------------------YADDLAQLIEHLDLRDAVLFGFS 94
Query: 265 LGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKL 324
GG + + L + L + A +L
Sbjct: 95 TGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLADRSQL 154
Query: 325 IEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNL 384
+ + + +++ AA + +
Sbjct: 155 YKDLASG-------------PFFGFNQPGAKSSAGMVDWFWLQGMAAGHKN-AYDCIKAF 200
Query: 385 SFREALSRCQMNGVPICLIYGKEDPWVKP-VWGLQVKRQVPEAPYYEISPAGHCPHDEVP 443
S + + VP +++G D V G+ V + S A H D
Sbjct: 201 SETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHGLTDTHK 260
Query: 444 E 444
+
Sbjct: 261 D 261
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} Length = 279 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Score = 52.2 bits (123), Expect = 4e-08
Identities = 39/301 (12%), Positives = 75/301 (24%), Gaps = 49/301 (16%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDED 204
++YE G + PV+ + G+ + +E+Q ++L + YR D G G S
Sbjct: 14 ELYYEDQG----SGQPVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFGGSSKVNT 69
Query: 205 PTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNS 264
D S + + + + +
Sbjct: 70 GYDYDTFAADLHTVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKL---------- 119
Query: 265 LGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKL 324
L + PF +
Sbjct: 120 -------------------AFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFT 160
Query: 325 IEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNL 384
+ D + + +Q +A A+ P
Sbjct: 161 DFYKNFYNLDENLGSRISEQAVTGSW--------------NVAIGSAPVAAYAVVPAWIE 206
Query: 385 SFREALSRCQMNGVPICLIYGKEDPWVKP-VWGLQVKRQVPEAPYYEISPAGHCPHDEVP 443
FR + + G P +++G +D + + + VPEA Y E+ A H
Sbjct: 207 DFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAVPEADYVEVEGAPHGLLWTHA 266
Query: 444 E 444
+
Sbjct: 267 D 267
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 52.1 bits (124), Expect = 4e-08
Identities = 27/183 (14%), Positives = 48/183 (26%), Gaps = 50/183 (27%)
Query: 161 PVLFLPGFG-----VGSFHYEKQLKDLGKD-YRAWAIDFLGQGMSLPDEDPTPRSKEGDS 214
P++ G +G ++ L +D + + + S
Sbjct: 9 PIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTS--------------- 53
Query: 215 TEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFA 274
+ QV + + V ++G+S GG Y A
Sbjct: 54 ---------------------EVRGEQLLQQVEEIVALSGQPKVNLIGHSHGGPTIRYVA 92
Query: 275 ACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISD 334
A P L+ T + P G S + A + L+ + IS
Sbjct: 93 AVRPDLIASATSV-GAPHKG-------SDTADFLRQIPPGSAGEAVLSGLVNSLGALISF 144
Query: 335 PES 337
S
Sbjct: 145 LSS 147
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Score = 49.3 bits (117), Expect = 4e-07
Identities = 35/255 (13%), Positives = 58/255 (22%), Gaps = 63/255 (24%)
Query: 159 SPPVLFLPGFGVGS-----FHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGD 213
S P+L +PG G ++ LG Y I ++
Sbjct: 31 SKPILLVPGTGTTGPQSFDSNWIPLSTQLG--YTPCWISPPPFMLN-------------- 74
Query: 214 STEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYF 273
+ + + + + + V+ S GG VA +
Sbjct: 75 --------------------DTQVNTEYMVNAITALYAGSGNNKLPVLTWSQGGLVAQWG 114
Query: 274 AACNPHLVKGVTLL-------NATPFWGFSPNPIRSPKLARILPWSGTF--------PLP 318
P + V L T G S L
Sbjct: 115 LTFFPSIRSKVDRLMAFAPDYKGTVLAGPLDALAVSAPSVWQQTTGSALTTALRNAGGLT 174
Query: 319 ASVRKL-IEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIM 377
V + +I P+ L Y + NV + P A +
Sbjct: 175 QIVPTTNLYSATDEIVQPQVSNSPLDSSYLFNGKNV------QAQAVCGPLFVIDHAGSL 228
Query: 378 FAPQGNLSFREALSR 392
+ + R AL
Sbjct: 229 TSQFSYVVGRSALRS 243
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 48.7 bits (114), Expect = 5e-07
Identities = 43/301 (14%), Positives = 81/301 (26%), Gaps = 51/301 (16%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDED 204
+++YE G PV+ + GF + +E+Q L YR D G G
Sbjct: 14 DLYYEDHG----TGQPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQ------ 63
Query: 205 PTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNS 264
+ D +++ V V ++
Sbjct: 64 ------------------------SSQPTTGYDYDTFAADLNTVLETLDLQDAVLVGFST 99
Query: 265 LGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKL 324
G VA Y ++ + V L + + + + + A
Sbjct: 100 GTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAF 159
Query: 325 IEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNL 384
+ + + + T + R T + A+ +
Sbjct: 160 YTGFFNDFYNLD----------ENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTD- 208
Query: 385 SFREALSRCQMNGVPICLIYGKEDPWVKP-VWGLQVKRQVPEAPYYEISPAGHCPHDEVP 443
FR + R VP +++G D + + +P A Y E+ A H
Sbjct: 209 -FRADIPRID---VPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHA 264
Query: 444 E 444
E
Sbjct: 265 E 265
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Score = 47.2 bits (110), Expect = 1e-06
Identities = 46/301 (15%), Positives = 80/301 (26%), Gaps = 53/301 (17%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDED 204
++++ G + PVLF G+ + + +E Q++ L + YR A D G G
Sbjct: 10 QIYFKDWG----SGKPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGR------ 59
Query: 205 PTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNS 264
D ++E V +
Sbjct: 60 ------------------------SDQPWTGNDYDTFADDIAQLIEHLDLKEVTLVGFSM 95
Query: 265 LGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKL 324
GG VA Y A V G+ LL A + P + +P + K
Sbjct: 96 GGGDVARYIARHGSARVAGLVLLGAVTPL-----FGQKPDYPQGVPLDVFARFKTELLKD 150
Query: 325 IEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNL 384
+ P + N V ++ ++T A +
Sbjct: 151 RAQFISDFNAP------------FYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAF 198
Query: 385 SFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQ-VKRQVPEAPYYEISPAGHCPHDEVP 443
+ + VP +I+G D V + + A A H
Sbjct: 199 AETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTHA 258
Query: 444 E 444
+
Sbjct: 259 Q 259
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.1 bits (110), Expect = 2e-06
Identities = 29/287 (10%), Positives = 58/287 (20%), Gaps = 39/287 (13%)
Query: 160 PPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKN 219
P+ + + + L + + DS
Sbjct: 26 RPLFLVHPIEGSTTVFHSLASRL--SIPTYGLQCTRAAPL-------------DSIH--- 67
Query: 220 FLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPH 279
L + + P V G S G VA +
Sbjct: 68 --------------------SLAAYYIDCIRQVQPEGPYRVAGYSYGACVAFEMCSQLQA 107
Query: 280 LVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKIS-DPESI 338
N+ + SP + + + + A + F+ Q + +
Sbjct: 108 QQSPAPTHNSLFLFDGSPTYVLAYTQSYRAKLTPGCEAEAETEAICFFVQQFTDMEHNRV 167
Query: 339 AEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGV 398
E L + V I SFA+ F + + + V
Sbjct: 168 LEALLPLKGLEERVAAAVDLIIKSHQGLDRQELSFAARSFYYKLRAAEQYTPKAKYYGNV 227
Query: 399 PICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEV 445
+ + + + H E +
Sbjct: 228 MLLRAKTGGAYGEDLGADYNLSQVCDGKVSVHVIEGDHRTLLEGSGL 274
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Score = 46.5 bits (109), Expect = 3e-06
Identities = 35/314 (11%), Positives = 71/314 (22%), Gaps = 85/314 (27%)
Query: 138 FWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQ 196
WE PK N + +L GF H+ + L + + D L
Sbjct: 19 VWETPPKEN--------VPFKNNTILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLHH 70
Query: 197 GMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIRE 256
G E + L V ++++ +
Sbjct: 71 V----------GLSSGSIDE-----FTMTTGKN----------SLCT--VYHWLQTKGTQ 103
Query: 257 PVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFP 316
+ ++ SL VA + + L +T + L + L +
Sbjct: 104 NIGLIAASLSARVAYEVIS-DLELSFLITAVGVVNLRDT---------LEKALGFDYLSL 153
Query: 317 LPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASI 376
+L + + S
Sbjct: 154 PI---DELPNDLDFEGHKLGS-------------------------------EVFVRDCF 179
Query: 377 MFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP--EAPYYEISPA 434
S + ++ VP+ D WVK + + Y + +
Sbjct: 180 EHHWDTLDSTLDKVANTS---VPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGS 236
Query: 435 GHCPHDEVPEVCSL 448
H + + + +
Sbjct: 237 SHDLGENLVVLRNF 250
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} Length = 209 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Score = 43.1 bits (100), Expect = 2e-05
Identities = 20/191 (10%), Positives = 47/191 (24%), Gaps = 20/191 (10%)
Query: 148 HYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTP 207
Y G + + L G G + +
Sbjct: 12 PYRLLGAGKESRECLFLLHGSG------------------VDETTLVPLARRIAPTATLV 53
Query: 208 RSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKE--VIREPVYVVGNSL 265
++ E+ + D + + + K + + +G S
Sbjct: 54 AARGRIPQEDGFRWFERIDPTRFEQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSN 113
Query: 266 GGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLI 325
G + +P +V+ LL P P + I+ + V L+
Sbjct: 114 GANLVSSLMLLHPGIVRLAALLRPMPVLDHVPATDLAGIRTLIIAGAADETYGPFVPALV 173
Query: 326 EFIWQKISDPE 336
+ + ++ +
Sbjct: 174 TLLSRHGAEVD 184
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} Length = 203 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Score = 42.0 bits (97), Expect = 5e-05
Identities = 24/191 (12%), Positives = 46/191 (24%), Gaps = 21/191 (10%)
Query: 147 VHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPT 206
H +AG +P + L G G + L +
Sbjct: 7 FHKSRAG--VAGAPLFVLLHGTGGDENQFFDFGARLLPQATILSPVGDVSEH-------- 56
Query: 207 PRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLG 266
+ + +L + D + + PV +G S G
Sbjct: 57 ----------GAARFFRRTGEGVYDMVDLERATGKMADFIKANREHYQAGPVIGLGFSNG 106
Query: 267 GFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPAS-VRKLI 325
+ P L L++ + +P + + I P + L
Sbjct: 107 ANILANVLIEQPELFDAAVLMHPLIPFEPKISPAKPTRRVLITAGERDPICPVQLTKALE 166
Query: 326 EFIWQKISDPE 336
E + + E
Sbjct: 167 ESLKAQGGTVE 177
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} Length = 179 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Score = 40.7 bits (94), Expect = 1e-04
Identities = 18/155 (11%), Positives = 40/155 (25%), Gaps = 36/155 (23%)
Query: 160 PPVLFLPGFGVGSFHYEKQLKDLGKD-YRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEK 218
PV+ + G G SF++ L + + +
Sbjct: 3 NPVVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWD-------------------- 42
Query: 219 NFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAAC-- 276
+ + V + E + V +V +S+GG +Y+
Sbjct: 43 ------------KTGTNYNNGPVLSRFVQKVLDETGAKKVDIVAHSMGGANTLYYIKNLD 90
Query: 277 NPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPW 311
+ V V L + + + + +
Sbjct: 91 GGNKVANVVTL-GGANRLTTGKALPGTDPNQKILY 124
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} Length = 394 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Score = 39.7 bits (91), Expect = 5e-04
Identities = 28/320 (8%), Positives = 59/320 (18%), Gaps = 51/320 (15%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKD-------YRAWAIDFLGQGM 198
+H+ E ++ P+ L G+ + L+ ++ + G
Sbjct: 93 TIHFAALFSEREDAVPIALLHGWPGSFVEFYPILQLFREEYTPETLPFHLVVPSLPGYTF 152
Query: 199 SLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPV 258
S + + V +K++
Sbjct: 153 SSGPPLDKD-----------------------------FGLMDNARVVDQLMKDLGFGSG 183
Query: 259 YVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLP 318
Y++ G K V L I S A +
Sbjct: 184 YIIQGGDIGSFVGRLLGVGFDACKAVHLNLCAMRAPPEGPSIESLSAAEKEGIARMEKFM 243
Query: 319 ASVRKLIEFIWQKISDPESIAEVLKQVYA----------DHATNVDTVFTRILETTQHPA 368
+ S + ++
Sbjct: 244 TDGLAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSETILEMVSLYWLTE 303
Query: 369 AAASFASIMFAPQGNLSFREALSRCQMNG---VPICLIYGKEDPWVKPVWGLQVKRQVPE 425
+ S + Q P + +D P +
Sbjct: 304 SFPRAIHTYRETTPTASAPNGATMLQKELYIHKPFGFSFFPKDLCPVPR--SWIATTGNL 361
Query: 426 APYYEISPAGHCPHDEVPEV 445
+ + + GH E P
Sbjct: 362 VFFRDHAEGGHFAALERPRE 381
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 451 | |||
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 100.0 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 100.0 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 100.0 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 100.0 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 100.0 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 100.0 | |
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 100.0 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 100.0 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 100.0 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 100.0 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 100.0 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 100.0 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 100.0 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 99.98 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 99.97 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 99.97 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 99.97 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 99.97 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 99.96 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 99.95 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 99.95 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 99.95 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 99.93 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.93 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 99.93 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 99.86 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 99.85 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 99.85 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 99.85 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.84 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 99.83 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.83 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.83 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.82 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.82 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 99.82 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.81 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.78 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 99.75 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.75 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.71 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.67 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 99.67 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 99.67 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.66 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.66 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 99.63 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.62 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.61 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.61 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.59 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 99.57 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 99.57 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 99.56 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 99.43 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 99.42 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 99.42 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 99.39 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 99.17 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 99.16 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 99.13 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 98.98 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 98.97 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 98.95 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 98.93 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 98.91 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 98.9 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 98.88 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 98.83 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 98.83 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 98.83 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 98.79 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 98.7 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 98.69 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 98.66 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 98.63 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 98.47 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 98.42 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 98.33 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 98.3 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 98.27 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 98.27 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 98.08 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 97.88 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 96.2 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 96.0 | |
| d2ha2a1 | 542 | Acetylcholinesterase {Mouse (Mus musculus) [TaxId: | 95.87 | |
| d1ea5a_ | 532 | Acetylcholinesterase {Pacific electric ray (Torped | 95.83 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 95.68 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 95.6 | |
| d1ukca_ | 517 | Esterase EstA {Aspergillus niger [TaxId: 5061]} | 94.99 | |
| d1llfa_ | 534 | Type-B carboxylesterase/lipase {Candida cylindrace | 94.95 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 94.66 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 94.56 | |
| d2bcea_ | 579 | Bile-salt activated lipase (cholesterol esterase) | 94.54 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 94.45 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 94.37 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 94.37 | |
| d1dx4a_ | 571 | Acetylcholinesterase {Fruit fly (Drosophila melano | 92.19 | |
| d1cexa_ | 197 | Cutinase {Fungus (Fusarium solani), subsp. pisi [T | 90.61 | |
| d1qoza_ | 207 | Acetylxylan esterase {Trichoderma reesei [TaxId: 5 | 82.26 |
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=100.00 E-value=1.9e-35 Score=278.07 Aligned_cols=277 Identities=16% Similarity=0.131 Sum_probs=178.0
Q ss_pred eeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHH-HHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCch
Q 013006 138 FWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYE-KQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDST 215 (451)
Q Consensus 138 ~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~-~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~ 215 (451)
.+...+|++|+|+++|++ ++|+|||+||++.+...|. .++..| .++|+|+++|+||||.|+.......
T Consensus 3 ~~~~~g~~~i~y~~~G~~--~~p~vvl~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~-------- 72 (297)
T d1q0ra_ 3 RIVPSGDVELWSDDFGDP--ADPALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAH-------- 72 (297)
T ss_dssp EEEEETTEEEEEEEESCT--TSCEEEEECCTTCCGGGSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTTTS--------
T ss_pred eEEEECCEEEEEEEecCC--CCCEEEEECCCCcChhHHHHHHHHHHHhCCCEEEEEeCCCCccccccccccc--------
Confidence 455678999999999954 6899999999999999985 466666 5689999999999999975433211
Q ss_pred hhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCC
Q 013006 216 EEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGF 295 (451)
Q Consensus 216 ~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~ 295 (451)
.|+++++++|+..++++++.++++++||||||.+++.+|.++|++|+++|++++.+....
T Consensus 73 --------------------~~~~~~~~~d~~~ll~~l~~~~~~lvGhS~Gg~~a~~~a~~~P~~v~~lvli~~~~~~~~ 132 (297)
T d1q0ra_ 73 --------------------PYGFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDID 132 (297)
T ss_dssp --------------------CCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCC
T ss_pred --------------------ccccchhhhhhccccccccccceeeccccccchhhhhhhcccccceeeeEEEcccccccc
Confidence 279999999999999999999999999999999999999999999999999998642111
Q ss_pred CCCCCCchHHh---hhcCCCCCCC--ChHHHHHHHHHHHHhcCCh-HHHHHHHH--HHhhcC-CCChHHHHHHHHhhccC
Q 013006 296 SPNPIRSPKLA---RILPWSGTFP--LPASVRKLIEFIWQKISDP-ESIAEVLK--QVYADH-ATNVDTVFTRILETTQH 366 (451)
Q Consensus 296 ~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~ 366 (451)
...... .......... .......+. ......... ..+...+. ...... .................
T Consensus 133 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (297)
T d1q0ra_ 133 -----FDANIERVMRGEPTLDGLPGPQQPFLDALA-LMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAID 206 (297)
T ss_dssp -----HHHHHHHHHHTCCCSSCSCCCCHHHHHHHH-HHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHH
T ss_pred -----chhhhHHHhhhhhhhhhhhhhhHHHHHHHH-HhccccchhhHHHHHHHHHHhhhccccccchHHHHHHHHHHhhh
Confidence 011111 1111111111 111111111 111111111 11111111 111111 11111111111110000
Q ss_pred hhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHH
Q 013006 367 PAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVC 446 (451)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v 446 (451)
... .................+....++++++||++|+|++|++++++.++.+++.+|++++++++++||+++.|+|+++
T Consensus 207 ~~~-~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~ 285 (297)
T d1q0ra_ 207 HAG-GVLAEPYAHYSLTLPPPSRAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLIPTARLAEIPGMGHALPSSVHGPL 285 (297)
T ss_dssp HTT-TCCSCCCGGGGCCCCCGGGGGGGGGCCSCEEEEEETTCSSSCTTHHHHHHHTSTTEEEEEETTCCSSCCGGGHHHH
T ss_pred hcc-ccchhhhhhhhhhhccccchhhhhccCCceEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCcchhhCHHHH
Confidence 000 0000000000001111344556788999999999999999999999999999999999999999999999999999
Q ss_pred HhhhC
Q 013006 447 SLCLL 451 (451)
Q Consensus 447 ~~~Il 451 (451)
++.|+
T Consensus 286 ~~~i~ 290 (297)
T d1q0ra_ 286 AEVIL 290 (297)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98874
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=100.00 E-value=2.8e-35 Score=272.44 Aligned_cols=251 Identities=21% Similarity=0.255 Sum_probs=172.1
Q ss_pred ceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChh---cHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013006 137 CFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSF---HYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGD 213 (451)
Q Consensus 137 ~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~---~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~ 213 (451)
.+++ .||++|+|.+.| ++|||||+||++++.. .|..+++.|+++|+|+++|+||||.|+.+...
T Consensus 5 ~~~~-~dg~~l~y~~~G----~g~~vvllHG~~~~~~~~~~~~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~-------- 71 (268)
T d1j1ia_ 5 RFVN-AGGVETRYLEAG----KGQPVILIHGGGAGAESEGNWRNVIPILARHYRVIAMDMLGFGKTAKPDIE-------- 71 (268)
T ss_dssp EEEE-ETTEEEEEEEEC----CSSEEEEECCCSTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCSSC--------
T ss_pred eEEE-ECCEEEEEEEEc----CCCeEEEECCCCCCccHHHHHHHHHHHHhcCCEEEEEcccccccccCCccc--------
Confidence 3444 589999999999 4689999999987554 57788899999999999999999999754332
Q ss_pred chhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCC-CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCC
Q 013006 214 STEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR-EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPF 292 (451)
Q Consensus 214 ~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~-~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~ 292 (451)
++.+++++++.+++++++. ++++++||||||.+++.+|.++|++|+++|++++.+.
T Consensus 72 -----------------------~~~~~~~~~~~~~i~~l~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lil~~~~~~ 128 (268)
T d1j1ia_ 72 -----------------------YTQDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGL 128 (268)
T ss_dssp -----------------------CCHHHHHHHHHHHHHHSCCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBC
T ss_pred -----------------------cccccccccchhhHHHhhhcccceeeeccccccccchhhccChHhhheeeecCCCcc
Confidence 6899999999999999988 4799999999999999999999999999999998643
Q ss_pred CCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHH
Q 013006 293 WGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAAS 372 (451)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (451)
..... ....... ........ ................+..................
T Consensus 129 ~~~~~-----~~~~~~~---~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (268)
T d1j1ia_ 129 VVEIH-----EDLRPII---NYDFTREG-----------------MVHLVKALTNDGFKIDDAMINSRYTYATDEATRKA 183 (268)
T ss_dssp CCC------------------CCSCHHH-----------------HHHHHHHHSCTTCCCCHHHHHHHHHHHHSHHHHHH
T ss_pred ccccc-----hhhhhhh---hhhhhhhh-----------------hHHHHHHHhhhhhhhhhhhhHHHHHhhhhhhhhhh
Confidence 21110 1111110 00011111 11111112222222222222222222111111111
Q ss_pred HHHH---HhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhh
Q 013006 373 FASI---MFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLC 449 (451)
Q Consensus 373 ~~~~---~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~ 449 (451)
+... ....... ....+.+.++++|+|+|+|++|.++|++..+++.+.+|++++++++++||++++|+|++|++.
T Consensus 184 ~~~~~~~~~~~~~~---~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~ 260 (268)
T d1j1ia_ 184 YVATMQWIREQGGL---FYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLIDDSWGYIIPHCGHWAMIEHPEDFANA 260 (268)
T ss_dssp HHHHHHHHHHHTSS---BCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCTTEEEEEESSCCSCHHHHSHHHHHHH
T ss_pred hhhhhhhhhccccc---cchhhhHhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHH
Confidence 1111 1111111 122334678999999999999999999999999999999999999999999999999999987
Q ss_pred hC
Q 013006 450 LL 451 (451)
Q Consensus 450 Il 451 (451)
|+
T Consensus 261 i~ 262 (268)
T d1j1ia_ 261 TL 262 (268)
T ss_dssp HH
T ss_pred HH
Confidence 63
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=100.00 E-value=2.4e-34 Score=269.24 Aligned_cols=272 Identities=19% Similarity=0.202 Sum_probs=185.9
Q ss_pred CCCCccceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCC
Q 013006 131 GAPITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSK 210 (451)
Q Consensus 131 ~~~~~~~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~ 210 (451)
|.+....+++. +|.+|+|..+|++ ++|+|||+||++++...|..+++.|+++|+|+++|+||||.|+.+...
T Consensus 4 ~~p~~~~~i~~-~g~~i~y~~~G~~--~~p~lvllHG~~~~~~~~~~~~~~L~~~~~vi~~d~~G~G~S~~~~~~----- 75 (291)
T d1bn7a_ 4 GFPFDPHYVEV-LGERMHYVDVGPR--DGTPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPDLD----- 75 (291)
T ss_dssp CCCCCCEEEEE-TTEEEEEEEESCS--SSSCEEEECCTTCCGGGGTTTHHHHTTTSCEEEECCTTSTTSCCCSCC-----
T ss_pred CCCCCCeEEEE-CCEEEEEEEeCCC--CCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEEeCCCCccccccccc-----
Confidence 56677777775 7999999999964 578999999999999999999999999999999999999999764332
Q ss_pred CCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 211 EGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 211 ~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
++.+++++|+.+++++++.++++++||||||.+++.+|.++|+++++++++++.
T Consensus 76 --------------------------~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~~~~li~~~~~ 129 (291)
T d1bn7a_ 76 --------------------------YFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFI 129 (291)
T ss_dssp --------------------------CCHHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHHHHHCGGGEEEEEEEEEC
T ss_pred --------------------------cchhHHHHHHhhhhhhhccccccccccccccchhHHHHHhCCcceeeeeeeccc
Confidence 799999999999999999999999999999999999999999999999999876
Q ss_pred CCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCCh-HHHHHHHHHHhhcCCCChHHHHHHHHhhccChhH
Q 013006 291 PFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDP-ESIAEVLKQVYADHATNVDTVFTRILETTQHPAA 369 (451)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (451)
+......... ............ ..... ...... ......+.... ..................+..
T Consensus 130 ~~~~~~~~~~--~~~~~~~~~~~~---~~~~~-------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 195 (291)
T d1bn7a_ 130 RPIPTWDEWP--EFARETFQAFRT---ADVGR-------ELIIDQNAFIEGVLPKCV--VRPLTEVEMDHYREPFLKPVD 195 (291)
T ss_dssp CCBCSGGGSC--HHHHHHHHHHTS---TTHHH-------HHHTTSCHHHHTHHHHTC--SSCCCHHHHHHHHGGGSSGGG
T ss_pred cCCccchhhh--hhhhhHHHHHhh---hhhHH-------HhhhhhhhhHHhhhhhhc--cccchHHHHHHHHHHhcchhh
Confidence 4311111000 000000000000 00000 000011 11111111111 111122233333333333332
Q ss_pred HHHHHHHHhcCCCCCc-------hhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccC
Q 013006 370 AASFASIMFAPQGNLS-------FREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEV 442 (451)
Q Consensus 370 ~~~~~~~~~~~~~~~~-------~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~ 442 (451)
................ .......++++++|+|+|+|++|.++|++..+++++.+|++++++++++||++++|+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~ 275 (291)
T d1bn7a_ 196 REPLWRFPNEIPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAESLPNCKTVDIGPGLHYLQEDN 275 (291)
T ss_dssp GHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHSTTEEEEEEEEESSCGGGTC
T ss_pred hHHHHHHHHHhhhhhhhchhhhhhhhhhhhhhcCCCCEEEEEeCCCCCcCHHHHHHHHHHCCCCEEEEECCCCCchHHhC
Confidence 2222222211111111 012233457789999999999999999999999999999999999999999999999
Q ss_pred hHHHHhhh
Q 013006 443 PEVCSLCL 450 (451)
Q Consensus 443 p~~v~~~I 450 (451)
|++|++.|
T Consensus 276 p~~v~~~i 283 (291)
T d1bn7a_ 276 PDLIGSEI 283 (291)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999876
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=1.4e-34 Score=268.11 Aligned_cols=254 Identities=21% Similarity=0.265 Sum_probs=172.5
Q ss_pred eeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhc---HHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCc
Q 013006 138 FWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFH---YEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDS 214 (451)
Q Consensus 138 ~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~---~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~ 214 (451)
.....+|++++|++.| ++|||||+||++.+... |..+++.|+++|+|+++|+||||.|..+...
T Consensus 6 ~~i~~~G~~~~Y~~~G----~G~pvvllHG~~~~~~~~~~~~~~~~~l~~~~~vi~~Dl~G~G~S~~~~~~--------- 72 (271)
T d1uk8a_ 6 KSILAAGVLTNYHDVG----EGQPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPENY--------- 72 (271)
T ss_dssp EEEEETTEEEEEEEEC----CSSEEEEECCCSTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCTTC---------
T ss_pred CEEEECCEEEEEEEEe----eCCeEEEECCCCCCccHHHHHHHHHHHHhCCCEEEEEeCCCCCCccccccc---------
Confidence 3446789999999999 47899999999876544 5667888988999999999999999764332
Q ss_pred hhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCC
Q 013006 215 TEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWG 294 (451)
Q Consensus 215 ~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~ 294 (451)
.++.+++++++..++++++.++++|+||||||.+++.+|.++|++++++|++++.+..
T Consensus 73 ---------------------~~~~~~~~~~~~~~~~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~lil~~~~~~~- 130 (271)
T d1uk8a_ 73 ---------------------NYSKDSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTR- 130 (271)
T ss_dssp ---------------------CCCHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCSC-
T ss_pred ---------------------cccccccchhhhhhhhhhcCCCceEeeccccceeehHHHHhhhccchheeecccCCCc-
Confidence 1689999999999999999999999999999999999999999999999999986421
Q ss_pred CCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHH
Q 013006 295 FSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFA 374 (451)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (451)
.............. +.......... .......................+.....+.
T Consensus 131 ----~~~~~~~~~~~~~~---~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (271)
T d1uk8a_ 131 ----FDVTEGLNAVWGYT---PSIENMRNLLD-----------------IFAYDRSLVTDELARLRYEASIQPGFQESFS 186 (271)
T ss_dssp ----CCCCHHHHHHHTCC---SCHHHHHHHHH-----------------HHCSCGGGCCHHHHHHHHHHHTSTTHHHHHH
T ss_pred ----ccchhhhhhhhhcc---chhHHHHHHHH-----------------HHhhhcccchhHHHHHHHhhhhchhHHHHHH
Confidence 11112222211111 11111111111 1111111111111111111111111111111
Q ss_pred HHHhcCCCC--CchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 375 SIMFAPQGN--LSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 375 ~~~~~~~~~--~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
......... .........+.++++|+|+|+|++|.++|++..+.+.+.+|++++++++++||++++|+|+++++.|
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i 264 (271)
T d1uk8a_ 187 SMFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELIDRAQLHVFGRCGHWTQIEQTDRFNRLV 264 (271)
T ss_dssp TTSCSSTHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCTTEEEEEESSCCSCHHHHTHHHHHHHH
T ss_pred hhcchhhhhhhhhccccHHHHHhhccceeEEecCCCCCcCHHHHHHHHHhCCCCEEEEECCCCCchHHHCHHHHHHHH
Confidence 100000000 0001122446789999999999999999999999999999999999999999999999999999876
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=100.00 E-value=3e-34 Score=268.63 Aligned_cols=267 Identities=18% Similarity=0.193 Sum_probs=176.2
Q ss_pred cCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhcc
Q 013006 142 KPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFL 221 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~ 221 (451)
.+|++|+|++.| ++|+|||+||+++++..|..+++.|+++|+|+++|+||||.|........
T Consensus 15 ~~~~~l~y~~~G----~gp~vv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~s~~~~~~~~-------------- 76 (293)
T d1ehya_ 15 LPDVKIHYVREG----AGPTLLLLHGWPGFWWEWSKVIGPLAEHYDVIVPDLRGFGDSEKPDLNDL-------------- 76 (293)
T ss_dssp CSSCEEEEEEEE----CSSEEEEECCSSCCGGGGHHHHHHHHTTSEEEEECCTTSTTSCCCCTTCG--------------
T ss_pred ECCEEEEEEEEC----CCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEecCCcccCCcccccccc--------------
Confidence 478999999999 47999999999999999999999999999999999999999975433211
Q ss_pred ccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCC
Q 013006 222 WGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIR 301 (451)
Q Consensus 222 w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~ 301 (451)
..++++++++|+.+++++++.++++++||||||.+++.+|.++|++++++|++++..... .+..
T Consensus 77 -------------~~~~~~~~a~~~~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~-~~~~-- 140 (293)
T d1ehya_ 77 -------------SKYSLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDF-GPVY-- 140 (293)
T ss_dssp -------------GGGCHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-------
T ss_pred -------------ccccchhhhhHHHhhhhhcCccccccccccccccchhcccccCccccceeeeeeccCccc-cchh--
Confidence 126899999999999999999999999999999999999999999999999999864211 0000
Q ss_pred chHHhhhcCCCCCCCChHHHHHHHHHHHHh-cCChHHHHHHHHHHh----hcCCCChHHHHHHHHhhccChhHHHH-HHH
Q 013006 302 SPKLARILPWSGTFPLPASVRKLIEFIWQK-ISDPESIAEVLKQVY----ADHATNVDTVFTRILETTQHPAAAAS-FAS 375 (451)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 375 (451)
.........+. .... ........ ..........+...+ ....................+..... +..
T Consensus 141 ~~~~~~~~~~~------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (293)
T d1ehya_ 141 FGLGHVHESWY------SQFH-QLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNY 213 (293)
T ss_dssp -------CCHH------HHHT-TCHHHHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHH
T ss_pred hhhhhhhhhhh------hhhh-ccchhhhhhccchhHHHHHHHHhhhhcccccccccHHHHHhhhhccccchhhhhhhhh
Confidence 00000000000 0000 00000000 111222222222222 22222233444444444433333222 222
Q ss_pred HHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHH-HHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 376 IMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWG-LQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 376 ~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~-~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
+............. .....+++|+++|+|++|.+++.+.. +.+.+..|++++++++++||++++|+|+++++.|
T Consensus 214 ~~~~~~~~~~~~~~-~~~~~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~Pe~~~~~I 288 (293)
T d1ehya_ 214 YRANIRPDAALWTD-LDHTMSDLPVTMIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEKPEIAIDRI 288 (293)
T ss_dssp HHHHSSSSCCCCCT-GGGSCBCSCEEEEEECCSSCCTTHHHHHHHHHHBSSEEEEEETTCCSCHHHHCHHHHHHHH
T ss_pred hhhccccchhhhhh-hhhhccCCceEEEEeCCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCchHHHCHHHHHHHH
Confidence 21111111111111 12345789999999999999998765 5567778999999999999999999999999876
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-34 Score=276.08 Aligned_cols=269 Identities=18% Similarity=0.265 Sum_probs=179.7
Q ss_pred CCccceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCC
Q 013006 133 PITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKE 211 (451)
Q Consensus 133 ~~~~~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~ 211 (451)
.++..++++.||++|+|++.| ++|+|||+||+++++..|+.+++.|+ ++|+|+++|+||||.|..+....
T Consensus 10 ~~~~~~v~~~~g~~i~y~~~G----~gp~vlllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~----- 80 (322)
T d1zd3a2 10 DMSHGYVTVKPRVRLHFVELG----SGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIE----- 80 (322)
T ss_dssp GSEEEEEEEETTEEEEEEEEC----CSSEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEEECTTSTTSCCCSCGG-----
T ss_pred CCceeEEEECCCCEEEEEEEc----CCCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEeccccccccccccccc-----
Confidence 578889999999999999999 46899999999999999999999996 47999999999999997654321
Q ss_pred CCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 212 GDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 212 ~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
.++++++++++.+++++++.++++++||||||.+++.+|.++|++|+++|++++..
T Consensus 81 ------------------------~~~~~~~~~~i~~l~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~ 136 (322)
T d1zd3a2 81 ------------------------EYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPF 136 (322)
T ss_dssp ------------------------GGSHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCC
T ss_pred ------------------------cccccccchhhhhhhhcccccccccccccchHHHHHHHHHhCCccccceEEEcccc
Confidence 27999999999999999999999999999999999999999999999999998753
Q ss_pred CCCCCCCCCCchHHhhh-cCCC---CCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCC-----------------
Q 013006 292 FWGFSPNPIRSPKLARI-LPWS---GTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHA----------------- 350 (451)
Q Consensus 292 ~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 350 (451)
... .....+..... ..+. .....+......... ...+.+...+....
T Consensus 137 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (322)
T d1zd3a2 137 IPA---NPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQ---------NLSRTFKSLFRASDESVLSMHKVCEAGGLFV 204 (322)
T ss_dssp CCC---CSSSCHHHHHHTCGGGHHHHHTTSTTHHHHHHHH---------THHHHHHHHSCCTTSCCCCTTSHHHHTSSST
T ss_pred ccc---ccccchhhhhhccchhhhHHhhhccchhhhhhhh---------hHHHHHHHHhhccchhhhhHHHHhhhhcccc
Confidence 211 11111110000 0000 000000000000000 00011111110000
Q ss_pred ----------CChHHHHHHHHhhccChhHHHHHHHHHhcCCCCC--chhHHhhhccCCCCCEEEEeeCCCCCCChHHHHH
Q 013006 351 ----------TNVDTVFTRILETTQHPAAAASFASIMFAPQGNL--SFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQ 418 (451)
Q Consensus 351 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~ 418 (451)
...+.....+....... .+........... ...+......++++|||+|+|++|.+++++..+.
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~ 280 (322)
T d1zd3a2 205 NSPEEPSLSRMVTEEEIQFYVQQFKKS----GFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQH 280 (322)
T ss_dssp TSCSSCCCCTTCCHHHHHHHHHHHHHH----TTHHHHHTTSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTT
T ss_pred ccccchhhhhhccHHHHHHHHHHHhhc----ccccccccccccccccccchhhhcccCCCCEEEEEeCCCCCCCHHHHHH
Confidence 00111111111111000 0011100000000 0012233457889999999999999999999999
Q ss_pred HHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 419 VKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 419 l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
+++.+|++++++++++||++++|+|++|++.|
T Consensus 281 ~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i 312 (322)
T d1zd3a2 281 MEDWIPHLKRGHIEDCGHWTQMDKPTEVNQIL 312 (322)
T ss_dssp GGGTCTTCEEEEETTCCSCHHHHSHHHHHHHH
T ss_pred HHHhCCCCEEEEECCCCCchHHhCHHHHHHHH
Confidence 99999999999999999999999999999876
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=100.00 E-value=2.9e-34 Score=268.08 Aligned_cols=260 Identities=20% Similarity=0.231 Sum_probs=174.8
Q ss_pred cCCeEEEEeecCCCCCCCCcEEEecCCCCCh---hcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhh
Q 013006 142 KPKFNVHYEKAGCENVNSPPVLFLPGFGVGS---FHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEK 218 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~---~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~ 218 (451)
.+++++||...|+ +++|+|||+||++++. ..|..+++.|+++|+|+++|+||||.|+.......
T Consensus 11 ~~~~~~h~~~~G~--~~~p~ivllHG~~~~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~----------- 77 (281)
T d1c4xa_ 11 SGTLASHALVAGD--PQSPAVVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPDLIGFGQSEYPETYPG----------- 77 (281)
T ss_dssp CTTSCEEEEEESC--TTSCEEEEECCCSTTCCHHHHHGGGHHHHHTTSEEEEECCTTSTTSCCCSSCCS-----------
T ss_pred cCCEEEEEEEEec--CCCCEEEEECCCCCCCcHHHHHHHHHHHHhCCCEEEEEeCCCCccccccccccc-----------
Confidence 4569999999996 4689999999998654 35788899999999999999999999976543210
Q ss_pred hccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCC
Q 013006 219 NFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPN 298 (451)
Q Consensus 219 ~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~ 298 (451)
...++++++++++.+++++++.++++++||||||.+++.+|.++|++|+++|++++.+....
T Consensus 78 ---------------~~~~~~~~~~~~i~~~i~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~~--- 139 (281)
T d1c4xa_ 78 ---------------HIMSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMN--- 139 (281)
T ss_dssp ---------------SHHHHHHHHHHHHHHHHHHHTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCS---
T ss_pred ---------------cchhhHHHhhhhccccccccccccceeccccccccccccccccccccccceEEeccccCccc---
Confidence 01256788999999999999999999999999999999999999999999999998643211
Q ss_pred CCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCC--CChHHHHHHHHhhccChhHHHHHHHH
Q 013006 299 PIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHA--TNVDTVFTRILETTQHPAAAASFASI 376 (451)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (451)
...........+...... ......+..+..... ..........................
T Consensus 140 -~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (281)
T d1c4xa_ 140 -ARPPELARLLAFYADPRL------------------TPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVM 200 (281)
T ss_dssp -SCCHHHHHHHTGGGSCCH------------------HHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred -cchhHHHHHHHhhhhccc------------------chhhhhhhhhcccccccchhhhHHHHHhhhcccchhhhhhhhh
Confidence 112222222221111100 011111111111110 11111112222221121111111111
Q ss_pred HhcCCC-CCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhhC
Q 013006 377 MFAPQG-NLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCLL 451 (451)
Q Consensus 377 ~~~~~~-~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~Il 451 (451)
...... ..........+.++++|+|+|+|++|.++|++..+.+++.+|++++++++++||++++|+|+++++.|+
T Consensus 201 ~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 276 (281)
T d1c4xa_ 201 FESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVPLDTSLYLTKHLKHAELVVLDRCGHWAQLERWDAMGPMLM 276 (281)
T ss_dssp HHHHSSCCGGGCCCHHHHTTCCSCEEEEEETTCSSSCTHHHHHHHHHCSSEEEEEESSCCSCHHHHSHHHHHHHHH
T ss_pred hhHHhhhhhhhccchhhhhhhccceEEEEeCCCCCcCHHHHHHHHHHCCCCEEEEECCCCCchHHhCHHHHHHHHH
Confidence 111111 111122234467899999999999999999999999999999999999999999999999999998873
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=100.00 E-value=5.2e-34 Score=266.48 Aligned_cols=253 Identities=20% Similarity=0.240 Sum_probs=174.8
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHH----hhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhh
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLK----DLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEK 218 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~----~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~ 218 (451)
++++|+|+..| ++|+|||+||++.+...|..+.. .+.++|+|+++|+||||.|..+....
T Consensus 18 ~~~~i~y~~~G----~G~~ivllHG~~~~~~~~~~~~~~l~~~~~~g~~v~~~D~~G~G~S~~~~~~~------------ 81 (283)
T d2rhwa1 18 SDFNIHYNEAG----NGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDE------------ 81 (283)
T ss_dssp EEEEEEEEEEC----CSSEEEEECCCSTTCCHHHHHTTTHHHHHHTTCEEEEECCTTSTTSCCCCCSS------------
T ss_pred CCEEEEEEEEc----CCCeEEEECCCCCChhHHHHHHHHHHHHHHCCCEEEEEeCCCCcccccccccc------------
Confidence 35899999999 47899999999999999977644 34678999999999999997654321
Q ss_pred hccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCC
Q 013006 219 NFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPN 298 (451)
Q Consensus 219 ~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~ 298 (451)
++...+++|+.+++++++++++++|||||||.+++.+|.++|++|+++|++++.+.......
T Consensus 82 ------------------~~~~~~~~~i~~li~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~ 143 (283)
T d2rhwa1 82 ------------------QRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFA 143 (283)
T ss_dssp ------------------CHHHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSS
T ss_pred ------------------cccchhhhhcccccccccccccccccccchHHHHHHHHHHhhhhcceEEEeCCCcCCcchhh
Confidence 56778899999999999999999999999999999999999999999999998643211111
Q ss_pred CCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhh-ccChhHHHHHH-HH
Q 013006 299 PIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILET-TQHPAAAASFA-SI 376 (451)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~ 376 (451)
.... .....+..... ..........+...........++........ ...+.....+. ..
T Consensus 144 ~~~~----------------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (283)
T d2rhwa1 144 PMPM----------------EGIKLLFKLYA--EPSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISA 205 (283)
T ss_dssp CSSC----------------HHHHHHHHHHH--SCCHHHHHHHHHHHCSCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred hhhH----------------HHHHHHHHHhh--hhhhhhHHHHHHHhhcccccCcHHHHHHHHHHhhhhhhhhhhhhhhh
Confidence 1101 11111111110 11222222333333322222222222222211 11222221111 11
Q ss_pred HhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 377 MFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 377 ~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
... .....+....+.++++|+++|+|++|.+++++.++++.+.+|++++++++++||++++|+|+++++.|
T Consensus 206 ~~~---~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i 276 (283)
T d2rhwa1 206 QKA---PLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGHWAQWEHADEFNRLV 276 (283)
T ss_dssp HHS---CGGGGCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHSSSEEEEEESSCCSCHHHHTHHHHHHHH
T ss_pred hhh---hccccchHHHHhhCCCCEEEEEeCCCCCcCHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHH
Confidence 111 12223445567789999999999999999999999999999999999999999999999999999876
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=1.4e-33 Score=261.50 Aligned_cols=259 Identities=16% Similarity=0.187 Sum_probs=172.7
Q ss_pred eeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchh
Q 013006 138 FWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTE 216 (451)
Q Consensus 138 ~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~ 216 (451)
|++++||++|+|++.| ++|||||+||+++++..|..+++.| .++|+|+++|+||||.|+.+...
T Consensus 2 ~~~t~dG~~l~y~~~G----~g~~ivlvHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~----------- 66 (274)
T d1a8qa_ 2 ICTTRDGVEIFYKDWG----QGRPVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWDG----------- 66 (274)
T ss_dssp EEECTTSCEEEEEEEC----SSSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSC-----------
T ss_pred eEECcCCCEEEEEEEC----CCCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEeCCCCccccccccc-----------
Confidence 6788999999999999 4689999999999999999999988 46899999999999999765432
Q ss_pred hhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHh-CCCccceEEEeccCCCCCC
Q 013006 217 EKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAAC-NPHLVKGVTLLNATPFWGF 295 (451)
Q Consensus 217 ~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~-~P~~v~~lvl~~~~~~~~~ 295 (451)
++.+++++|+.+++++++.++++++||||||.+++.++++ +|++|++++++++.+....
T Consensus 67 --------------------~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~~~~~~~a~~~p~~v~~~~~~~~~~~~~~ 126 (274)
T d1a8qa_ 67 --------------------YDFDTFADDLNDLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMI 126 (274)
T ss_dssp --------------------CSHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCB
T ss_pred --------------------ccchhhHHHHHHHHHHhhhhhhcccccccccchHHHHHHHhhhccceeEEEEeccCccch
Confidence 6899999999999999999999999999999999887665 5899999999998653221
Q ss_pred CCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCC---ChHHHHHHHHhhccChhHHHH
Q 013006 296 SPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHAT---NVDTVFTRILETTQHPAAAAS 372 (451)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 372 (451)
...... ..........+....... ............+..... ........+............
T Consensus 127 ~~~~~~------------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (274)
T d1a8qa_ 127 KSDKNP------------DGVPDEVFDALKNGVLTE--RSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGG 192 (274)
T ss_dssp CCSSCT------------TSBCHHHHHHHHHHHHHH--HHHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHH
T ss_pred hhhhcc------------chhhHHHHHHHHhhhhhh--hHHHhhhhhhhhhhccccchhhhhhHHHHHHHhhhccchhhh
Confidence 111000 000111111111110000 011122222222222211 111111211111111111111
Q ss_pred HHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHH-HHHHHHHCCCCcEEEeCCCCCCccc--cChHHHHhh
Q 013006 373 FASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVW-GLQVKRQVPEAPYYEISPAGHCPHD--EVPEVCSLC 449 (451)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~-~~~l~~~lp~~~~~~i~~~gH~~~~--e~p~~v~~~ 449 (451)
...... ....+....+.++++|+++|+|++|.+++++. .+.+++.+|++++++++++||++++ ++|++|++.
T Consensus 193 ~~~~~~-----~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~~~~~p~~~~~~ 267 (274)
T d1a8qa_ 193 VRCVDA-----FGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAMVPGDKEKFNRD 267 (274)
T ss_dssp HHHHHH-----HHHCCCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTTTTSTTHHHHHHHH
T ss_pred hhHHHH-----hhccchHHHHHhccceeeeeccCCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCcccccccCHHHHHHH
Confidence 111100 01122334567899999999999999999865 5678888999999999999999887 679999887
Q ss_pred h
Q 013006 450 L 450 (451)
Q Consensus 450 I 450 (451)
|
T Consensus 268 i 268 (274)
T d1a8qa_ 268 L 268 (274)
T ss_dssp H
T ss_pred H
Confidence 6
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=100.00 E-value=2.1e-33 Score=261.57 Aligned_cols=267 Identities=13% Similarity=0.109 Sum_probs=171.1
Q ss_pred ceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCch
Q 013006 137 CFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDST 215 (451)
Q Consensus 137 ~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~ 215 (451)
.+++ .||.+|+|+..|+++ ++|+|||+||+++++..|...+..| .++|+|+++|+||||.|+.+...
T Consensus 5 ~~~~-~~g~~i~y~~~g~~~-~~~~iv~lHG~~g~~~~~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~---------- 72 (290)
T d1mtza_ 5 NYAK-VNGIYIYYKLCKAPE-EKAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEPDQS---------- 72 (290)
T ss_dssp EEEE-ETTEEEEEEEECCSS-CSEEEEEECCTTTCCSGGGGGGGGGGGGTEEEEEECCTTSTTSCCCCGG----------
T ss_pred CeEE-ECCEEEEEEEcCCCC-CCCeEEEECCCCCchHHHHHHHHHHHHCCCEEEEEeCCCCccccccccc----------
Confidence 3444 589999999999753 4578999999988888887777666 56899999999999999754321
Q ss_pred hhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh-CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCC
Q 013006 216 EEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV-IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWG 294 (451)
Q Consensus 216 ~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l-~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~ 294 (451)
.++++++++|+.++++++ +.+++++|||||||.+++.+|.++|++|++++++++.+.
T Consensus 73 --------------------~~~~~~~~~~l~~ll~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~-- 130 (290)
T d1mtza_ 73 --------------------KFTIDYGVEEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSS-- 130 (290)
T ss_dssp --------------------GCSHHHHHHHHHHHHHHHHTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSB--
T ss_pred --------------------cccccchhhhhhhhhcccccccccceecccccchhhhhhhhcChhhheeeeecccccC--
Confidence 279999999999999998 689999999999999999999999999999999997532
Q ss_pred CCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHH----HhhcCCCChHHHHHHHHhhccChhHH
Q 013006 295 FSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQ----VYADHATNVDTVFTRILETTQHPAAA 370 (451)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (451)
.+....................+.................... .........+............
T Consensus 131 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 199 (290)
T d1mtza_ 131 -------VPLTVKEMNRLIDELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERR---- 199 (290)
T ss_dssp -------HHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHS----
T ss_pred -------cccchhhhhhhhhhhhHHHHHHHHHhhhhccccchhHHHHHHHHhhhhhcccccchHHHHHHHHHHhhh----
Confidence 1110000000000000011111111111111111111111111 1111111112211111111000
Q ss_pred HHHHHHHhc-----CCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHH
Q 013006 371 ASFASIMFA-----PQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEV 445 (451)
Q Consensus 371 ~~~~~~~~~-----~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~ 445 (451)
........ ........+....++++++|+++|+|++|.++| +.++.+.+.+|++++++++++||++++|+|++
T Consensus 200 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~D~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~ 277 (290)
T d1mtza_ 200 -NVYRIMNGPNEFTITGTIKDWDITDKISAIKIPTLITVGEYDEVTP-NVARVIHEKIAGSELHVFRDCSHLTMWEDREG 277 (290)
T ss_dssp -SHHHHHTCSBTTBCCSTTTTCBCTTTGGGCCSCEEEEEETTCSSCH-HHHHHHHHHSTTCEEEEETTCCSCHHHHSHHH
T ss_pred -hhhhhhcchhHHhHhhhhhcccHHHHhhcccceEEEEEeCCCCCCH-HHHHHHHHHCCCCEEEEECCCCCchHHhCHHH
Confidence 00111110 011111123345567889999999999998764 67889999999999999999999999999999
Q ss_pred HHhhh
Q 013006 446 CSLCL 450 (451)
Q Consensus 446 v~~~I 450 (451)
+++.|
T Consensus 278 ~~~~i 282 (290)
T d1mtza_ 278 YNKLL 282 (290)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99876
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=100.00 E-value=1.1e-33 Score=262.32 Aligned_cols=261 Identities=19% Similarity=0.162 Sum_probs=172.8
Q ss_pred eeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchh
Q 013006 138 FWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTE 216 (451)
Q Consensus 138 ~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~ 216 (451)
++++.||++|+|+.+|++ ++|+|||+||++++...|..++..| +++|+|+++|+||||.|..+...
T Consensus 2 ~i~~~dG~~l~y~~~G~~--~~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~----------- 68 (275)
T d1a88a_ 2 TVTTSDGTNIFYKDWGPR--DGLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPSTG----------- 68 (275)
T ss_dssp EEECTTSCEEEEEEESCT--TSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSC-----------
T ss_pred EEEecCCCEEEEEEecCC--CCCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeccccccccccccc-----------
Confidence 578899999999999974 5789999999999999999999988 66899999999999999754332
Q ss_pred hhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCc-chHHHHHHHHhCCCccceEEEeccCCCCCC
Q 013006 217 EKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSL-GGFVAVYFAACNPHLVKGVTLLNATPFWGF 295 (451)
Q Consensus 217 ~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~-GG~val~~A~~~P~~v~~lvl~~~~~~~~~ 295 (451)
++++++++|+.+++++++.+++++||||+ ||.+++.+|.++|++|+++|++++.+....
T Consensus 69 --------------------~~~~~~~~~~~~~l~~l~~~~~~~vg~s~~G~~~~~~~a~~~p~~v~~lvl~~~~~~~~~ 128 (275)
T d1a88a_ 69 --------------------HDMDTYAADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMV 128 (275)
T ss_dssp --------------------CSHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCB
T ss_pred --------------------ccccccccccccccccccccccccccccccccchhhcccccCcchhhhhhhhcccccccc
Confidence 79999999999999999999999999997 666778888999999999999998643211
Q ss_pred CCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhc----CCCChHHHHHHHHhhccChhHHH
Q 013006 296 SPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYAD----HATNVDTVFTRILETTQHPAAAA 371 (451)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 371 (451)
.... ............+...... .............+.. .......................
T Consensus 129 ~~~~------------~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (275)
T d1a88a_ 129 KSDT------------NPDGLPLEVFDEFRAALAA--NRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANA 194 (275)
T ss_dssp CBTT------------BTTSBCHHHHHHHHHHHHH--CHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHH
T ss_pred cchh------------hhhhhhhhhhhhhhhhhhh--hhHHHHHhhhhhhhhhcccchhhHHHHHHHHHHHhhcccchHH
Confidence 1100 0000011111111111100 0011111111111111 11111122221111110001111
Q ss_pred HHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChH-HHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 372 SFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPV-WGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~-~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
....... ....+....++++++|+|+|+|++|.++|.+ ..+.+.+.+|++++++++++||++++|+|+++++.|
T Consensus 195 ~~~~~~~-----~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i 269 (275)
T d1a88a_ 195 HYECIAA-----FSETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPHGMLSTHPEVLNPDL 269 (275)
T ss_dssp HHHHHHH-----HHHCCCHHHHHHCCSCEEEEEETTCSSSCSTTTHHHHHHHSTTEEEEEETTCCTTHHHHCHHHHHHHH
T ss_pred HHHHHHH-----hhhhhhhHHHHhhccccceeecCCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHH
Confidence 1111000 0011223345678999999999999999875 456788889999999999999999999999999876
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=100.00 E-value=1.1e-32 Score=262.25 Aligned_cols=272 Identities=17% Similarity=0.164 Sum_probs=173.3
Q ss_pred CCccceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCC
Q 013006 133 PITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEG 212 (451)
Q Consensus 133 ~~~~~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~ 212 (451)
+....+++..||.+|+|++.|+ +++|||||+||++++...|..+...+.++|+|+++|+||||.|+++....
T Consensus 10 P~~~~~i~~~dg~~i~y~~~G~--~~g~pvvllHG~~g~~~~~~~~~~~l~~~~~Vi~~D~rG~G~S~~~~~~~------ 81 (313)
T d1azwa_ 10 PYQQGSLKVDDRHTLYFEQCGN--PHGKPVVMLHGGPGGGCNDKMRRFHDPAKYRIVLFDQRGSGRSTPHADLV------ 81 (313)
T ss_dssp CSEEEEEECSSSCEEEEEEEEC--TTSEEEEEECSTTTTCCCGGGGGGSCTTTEEEEEECCTTSTTSBSTTCCT------
T ss_pred CCCCCEEEeCCCcEEEEEEecC--CCCCEEEEECCCCCCccchHHHhHHhhcCCEEEEEeccccCCCCcccccc------
Confidence 5678889999999999999995 46899999999999988998877777889999999999999998654332
Q ss_pred CchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCC
Q 013006 213 DSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPF 292 (451)
Q Consensus 213 ~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~ 292 (451)
.++++++++|+.++++++++++++||||||||.+++.+|.++|++|++++++++.+.
T Consensus 82 -----------------------~~~~~~~~~dl~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv~~~~~~~ 138 (313)
T d1azwa_ 82 -----------------------DNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLL 138 (313)
T ss_dssp -----------------------TCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCC
T ss_pred -----------------------chhHHHHHHHHHHHHHhhccccceeEEecCCcHHHHHHHHHhhhceeeeeEeccccc
Confidence 279999999999999999999999999999999999999999999999999998542
Q ss_pred CCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHH------------HHHhcCC-hHHHH-HHHHHH----hh-cCCCCh
Q 013006 293 WGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEF------------IWQKISD-PESIA-EVLKQV----YA-DHATNV 353 (451)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~-~~~~~-~~~~~~----~~-~~~~~~ 353 (451)
. ......................+... ....... ..... .....+ .. ......
T Consensus 139 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (313)
T d1azwa_ 139 R--------RFELEWFYQEGASRLFPDAWEHYLNAIPPVERADLMSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVD 210 (313)
T ss_dssp C--------HHHHHHHHTSSHHHHCHHHHHHHHHTSCGGGTTSHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHTSSSSCC
T ss_pred c--------ccchhhhhhcccchhhhHHHHHHHHhhhhhhhhhhhhhhhhhhcCccHHHHHHHHHhhhhccccccccccc
Confidence 1 11111110000000000000000000 0000000 00000 000000 00 000000
Q ss_pred HHHHHHHHhhccChhHHHHHHHH---HhcC--CCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcE
Q 013006 354 DTVFTRILETTQHPAAAASFASI---MFAP--QGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPY 428 (451)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~ 428 (451)
..... ..........+... .... .............+.+++|+++|+|++|.++|++.++.+++.+|++++
T Consensus 211 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~p~~~~~~l~~~~p~a~~ 286 (313)
T d1azwa_ 211 EDFVT----GHEDAHFALAFARIENHYFVNGGFFEVEDQLLRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAWPKAQL 286 (313)
T ss_dssp HHHHH----HHTCHHHHHHHHHHHHHHHHTGGGCSSTTHHHHTGGGGTTCCEEEEEETTCSSSCHHHHHHHHHHCTTSEE
T ss_pred hhhhc----ccchhHHHHHHhHHHHHHHhhccccccchhhhHhhhhcCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCEE
Confidence 01100 00011111111110 1011 111111222334567899999999999999999999999999999999
Q ss_pred EEeCCCCCCccccChHHHHhh
Q 013006 429 YEISPAGHCPHDEVPEVCSLC 449 (451)
Q Consensus 429 ~~i~~~gH~~~~e~p~~v~~~ 449 (451)
++++++||+++ +|+.++++
T Consensus 287 ~~i~~aGH~~~--ep~~~~~l 305 (313)
T d1azwa_ 287 QISPASGHSAF--EPENVDAL 305 (313)
T ss_dssp EEETTCCSSTT--SHHHHHHH
T ss_pred EEECCCCCCCC--CchHHHHH
Confidence 99999999976 46655544
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=4.2e-33 Score=258.52 Aligned_cols=255 Identities=17% Similarity=0.183 Sum_probs=166.1
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhcc
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFL 221 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~ 221 (451)
++++|+|++.| ++|||||+||++++...|..++..| .++|+|+++|+||||.|+.....
T Consensus 11 ~~v~i~y~~~G----~G~~ivllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~---------------- 70 (277)
T d1brta_ 11 TSIDLYYEDHG----TGQPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTG---------------- 70 (277)
T ss_dssp EEEEEEEEEEC----SSSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSC----------------
T ss_pred CcEEEEEEEEc----cCCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCCCcccccccc----------------
Confidence 46899999999 4789999999999999999999888 46899999999999999754332
Q ss_pred ccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcch-HHHHHHHHhCCCccceEEEeccCCCCCCCCCCC
Q 013006 222 WGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGG-FVAVYFAACNPHLVKGVTLLNATPFWGFSPNPI 300 (451)
Q Consensus 222 w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG-~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~ 300 (451)
++++++++|+.+++++++++++++||||||| .++..+|..+|++|+++|++++.+........
T Consensus 71 ---------------~~~~~~~~dl~~~l~~l~~~~~~lvGhS~G~~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~- 134 (277)
T d1brta_ 71 ---------------YDYDTFAADLNTVLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDD- 134 (277)
T ss_dssp ---------------CSHHHHHHHHHHHHHHHTCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTT-
T ss_pred ---------------cchhhhhhhhhhhhhccCcccccccccccchhhhhHHHHHhhhcccceEEEecCCCcccccchh-
Confidence 7999999999999999999999999999996 55667788899999999999986432211110
Q ss_pred CchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhc----CCCChHHHHHHHHhhccChhHHHHHHHH
Q 013006 301 RSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYAD----HATNVDTVFTRILETTQHPAAAASFASI 376 (451)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (451)
.............+...... .............+.. ....................... ..
T Consensus 135 ----------~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 199 (277)
T d1brta_ 135 ----------NPDGAAPQEFFDGIVAAVKA--DRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFA---AA 199 (277)
T ss_dssp ----------BTTCSBCHHHHHHHHHHHHH--CHHHHHHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHHSCHHH---HH
T ss_pred ----------hhhhhhhhhHHHHHHHhhhc--cchhhhhhccccccccchhhhhhhhHHHhhhhhcccchhhhhh---hh
Confidence 00000001111111111100 0001111111111110 00111111111111100000000 01
Q ss_pred HhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHH-HHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhhC
Q 013006 377 MFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVW-GLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCLL 451 (451)
Q Consensus 377 ~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~-~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~Il 451 (451)
....... .+....+.++++|+++|+|++|.+++++. .+.+.+.+|++++++++++||++++|+|++|++.|+
T Consensus 200 ~~~~~~~---~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 272 (277)
T d1brta_ 200 AAPTTWY---TDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALL 272 (277)
T ss_dssp HGGGGTT---CCCTTTGGGCCSCEEEEEETTCSSSCGGGTHHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHHHH
T ss_pred hhhhhhh---hhHHHHHHhcCccceeEeecCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHH
Confidence 1000001 12234567789999999999999999865 567888899999999999999999999999998763
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=100.00 E-value=1.5e-32 Score=255.24 Aligned_cols=255 Identities=19% Similarity=0.227 Sum_probs=167.5
Q ss_pred CeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccc
Q 013006 144 KFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLW 222 (451)
Q Consensus 144 g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w 222 (451)
+++|+|+..| ++|+|||+||++.++..|+.++..| .++|+|+++|+||||.|+.+...
T Consensus 12 ~v~i~y~~~G----~g~~illlHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~----------------- 70 (279)
T d1hkha_ 12 PIELYYEDQG----SGQPVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFGGSSKVNTG----------------- 70 (279)
T ss_dssp EEEEEEEEES----SSEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCCCSSC-----------------
T ss_pred eEEEEEEEEc----cCCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEechhhCCccccccc-----------------
Confidence 5699999999 4789999999999999999999877 77899999999999999754332
Q ss_pred cCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcch-HHHHHHHHhCCCccceEEEeccCCCCCCCCCCCC
Q 013006 223 GFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGG-FVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIR 301 (451)
Q Consensus 223 ~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG-~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~ 301 (451)
++++++++|+.++++++++++++|+|||||| .+++.+|..+|++|++++++++.+........
T Consensus 71 --------------~~~~~~~~di~~~i~~l~~~~~~lvGhS~Gg~~~a~~~a~~~p~~v~~lvli~~~~~~~~~~~~-- 134 (279)
T d1hkha_ 71 --------------YDYDTFAADLHTVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDD-- 134 (279)
T ss_dssp --------------CSHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTT--
T ss_pred --------------cchhhhhhhhhhhhhhcCcCccccccccccccchhhhhccccccccceeEEeeccCCccccchh--
Confidence 7999999999999999999999999999996 66777788889999999999875432111100
Q ss_pred chHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHh----hcCCCChHHHHHHHHhhccChhHHHHHHHHH
Q 013006 302 SPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVY----ADHATNVDTVFTRILETTQHPAAAASFASIM 377 (451)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (451)
+... ........+...... .............. .......+..................+....
T Consensus 135 ---------~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (279)
T d1hkha_ 135 ---------NPEG-VPQEVFDGIEAAAKG--DRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVP 202 (279)
T ss_dssp ---------BTTS-BCHHHHHHHHHHHHH--CHHHHHHHHHHHHHTHHHHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHH
T ss_pred ---------hhhh-hhHHHHHHHHHhhhh--hhhhhhhhhhhhhcccchhhhhhhhhhhhhhhhhhhcccchhhhhhhhh
Confidence 0000 001111111111100 00001111111111 0111111222211111111111111111111
Q ss_pred hcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChH-HHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 378 FAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPV-WGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 378 ~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~-~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
.. ..+..+..+.+..+++|+++|+|++|.+++.+ ..+.+++.+|++++++++++||++++|+|+++++.|
T Consensus 203 ~~---~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~v~~~i 273 (279)
T d1hkha_ 203 AW---IEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAVPEADYVEVEGAPHGLLWTHADEVNAAL 273 (279)
T ss_dssp HH---TCBCHHHHHHHHHHCCCEEEEEETTCSSSCTTTTHHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHHH
T ss_pred hh---hcccccchhhhcccCCceEEEEcCCCCccCHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHH
Confidence 10 11223445556778999999999999999865 568888999999999999999999999999999876
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=2.5e-32 Score=252.67 Aligned_cols=260 Identities=16% Similarity=0.115 Sum_probs=169.4
Q ss_pred eeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchh
Q 013006 138 FWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTE 216 (451)
Q Consensus 138 ~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~ 216 (451)
.+++.||++|+|+..| ++|||||+||++++...|..++..| .++|+|+++|+||||.|+.+...
T Consensus 2 ~f~~~dG~~i~y~~~G----~g~pvvllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~----------- 66 (273)
T d1a8sa_ 2 TFTTRDGTQIYYKDWG----SGQPIVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSG----------- 66 (273)
T ss_dssp EEECTTSCEEEEEEES----CSSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSC-----------
T ss_pred EEEeeCCcEEEEEEEC----CCCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEechhcCcccccccc-----------
Confidence 4677899999999999 4689999999999999999999998 56899999999999999765432
Q ss_pred hhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHH-HHHhCCCccceEEEeccCCCCCC
Q 013006 217 EKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVY-FAACNPHLVKGVTLLNATPFWGF 295 (451)
Q Consensus 217 ~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~-~A~~~P~~v~~lvl~~~~~~~~~ 295 (451)
++++++++|+.+++++++.++.+++|||+||.+++. +|..+|++|++++++++.+....
T Consensus 67 --------------------~~~~~~~~~~~~~l~~l~~~~~~lvg~s~gG~~~~~~~a~~~p~~v~~~~l~~~~~~~~~ 126 (273)
T d1a8sa_ 67 --------------------NDMDTYADDLAQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLML 126 (273)
T ss_dssp --------------------CSHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCB
T ss_pred --------------------ccccchHHHHHHHHHhcCccceeeeeeccCCccchhhhhhhhhhccceeEEEeccccccc
Confidence 799999999999999999999999999998866555 55567999999999998654221
Q ss_pred CCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhc----CCCChHHHHHHHHhhccChhHHH
Q 013006 296 SPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYAD----HATNVDTVFTRILETTQHPAAAA 371 (451)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 371 (451)
...... ..........+....... ............... .......................
T Consensus 127 ~~~~~~------------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (273)
T d1a8sa_ 127 KTEANP------------GGLPMEVFDGIRQASLAD--RSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKN 192 (273)
T ss_dssp CCSSCT------------TSBCHHHHHHHHHHHHHH--HHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHH
T ss_pred cccccc------------ccchhhhhhhHHHHHHHH--HHHHHHHHhhhhhhhcccchhhhhHHHHHHHHHhhcccchhh
Confidence 111000 000011111111111000 000011111111100 01111222222211111111111
Q ss_pred HHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHH-HHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 372 SFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVK-RQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~-~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
........ ...+....++++++|+++|+|++|.++|.+..+.+. +..|+++++++|++||++++|+|+++++.|
T Consensus 193 ~~~~~~~~-----~~~~~~~~~~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i 267 (273)
T d1a8sa_ 193 AYDCIKAF-----SETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHGLTDTHKDQLNADL 267 (273)
T ss_dssp HHHHHHHH-----HHCCCHHHHHTCCSCEEEEEETTCSSSCSTTTHHHHHHHSTTCEEEEETTCCSCHHHHTHHHHHHHH
T ss_pred hhhhHHHh-----hhhhhhHHHHhhccceEEEecCCCCCCCHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHH
Confidence 11111000 011223456778999999999999999988776654 556899999999999999999999999876
Q ss_pred C
Q 013006 451 L 451 (451)
Q Consensus 451 l 451 (451)
+
T Consensus 268 ~ 268 (273)
T d1a8sa_ 268 L 268 (273)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=100.00 E-value=5e-33 Score=263.78 Aligned_cols=265 Identities=17% Similarity=0.203 Sum_probs=173.7
Q ss_pred cCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhc
Q 013006 142 KPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNF 220 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~ 220 (451)
.||++++|.+.|+++ ..|+|||+||+++++..|..++..|. ++|+|+++|+||||.|..+...
T Consensus 31 ~~g~~~~y~~~G~~~-~~p~llllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~--------------- 94 (310)
T d1b6ga_ 31 YPGLRAHYLDEGNSD-AEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDE--------------- 94 (310)
T ss_dssp CTTCEEEEEEEECTT-CSCEEEECCCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCEESCG---------------
T ss_pred CCCEEEEEEEecCCC-CCCEEEEECCCCCchHHHHHHHHHhhccCceEEEeeecCcccccccccc---------------
Confidence 479999999999754 35788999999999999999999885 5799999999999999754322
Q ss_pred cccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCC
Q 013006 221 LWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPI 300 (451)
Q Consensus 221 ~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~ 300 (451)
..|+++++++|+.++++++++++++|+||||||.+++.+|.++|++|+++|++++.... .+.
T Consensus 95 --------------~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P~~V~~lvl~~~~~~~----~~~ 156 (310)
T d1b6ga_ 95 --------------EDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMT----DPV 156 (310)
T ss_dssp --------------GGCCHHHHHHHHHHHHHHHTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCC----CTT
T ss_pred --------------ccccccccccchhhhhhhccccccccccceecccccccchhhhccccceEEEEcCccCC----Ccc
Confidence 13799999999999999999999999999999999999999999999999999986432 112
Q ss_pred CchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHH---HHHHHH
Q 013006 301 RSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAA---SFASIM 377 (451)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 377 (451)
..+.......... .... ...... .................. ..+.....+........... .+....
T Consensus 157 ~~~~~~~~~~~~~---~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (310)
T d1b6ga_ 157 TQPAFSAFVTQPA---DGFT--AWKYDL--VTPSDLRLDQFMKRWAPT---LTEAEASAYAAPFPDTSYQAGVRKFPKMV 226 (310)
T ss_dssp TCTHHHHTTTSST---TTHH--HHHHHH--HSCSSCCHHHHHHHHSTT---CCHHHHHHHHTTCSSGGGCHHHHHHHHHH
T ss_pred cchhHHHHhhcch---hhhh--hhhhhh--ccchhhhhhhhhhccCcc---ccHHHHHHHHhhcchhhhhhcchhhhhhh
Confidence 2222222111110 0000 000000 001111111111111111 11111111111111111111 111111
Q ss_pred hcCCC---CCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCC-cEEEeCCCCCCccccChHHHHhhh
Q 013006 378 FAPQG---NLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEA-PYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 378 ~~~~~---~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~-~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
..... .............+++|+++++|++|.+++++..+.+++.+++. ++++++++||+++.|+|+++++.|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~pe~v~~~i 303 (310)
T d1b6ga_ 227 AQRDQACIDISTEAISFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALINGCPEPLEIADAGHFVQEFGEQVAREAL 303 (310)
T ss_dssp HSCCHHHHHHHHHHHHHHHHTCCSEEEEEEETTCSSSSHHHHHHHHHHSTTCCCCEEETTCCSCGGGGHHHHHHHHH
T ss_pred hhhhhhhhhhhhhhhHHhhcccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCccEEEECCCcCchhhhCHHHHHHHH
Confidence 00000 00001112234578999999999999999999999999999986 788999999999999999999876
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=1.2e-31 Score=247.36 Aligned_cols=256 Identities=19% Similarity=0.147 Sum_probs=168.2
Q ss_pred eeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchh
Q 013006 138 FWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTE 216 (451)
Q Consensus 138 ~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~ 216 (451)
.+...||++|+|+..| ++|||||+||++++...|..+++.|.+ +|+|+++|+||||.|+.+...
T Consensus 2 ~f~~~dG~~l~y~~~G----~g~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~----------- 66 (271)
T d1va4a_ 2 TFVAKDGTQIYFKDWG----SGKPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTG----------- 66 (271)
T ss_dssp EEECTTSCEEEEEEES----SSSEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTSCCCSSC-----------
T ss_pred EEEeECCeEEEEEEEc----CCCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeccccccccccccc-----------
Confidence 3556799999999999 468999999999999999999999954 799999999999999754332
Q ss_pred hhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHH-HHHHHhCCCccceEEEeccCCCCCC
Q 013006 217 EKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVA-VYFAACNPHLVKGVTLLNATPFWGF 295 (451)
Q Consensus 217 ~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~va-l~~A~~~P~~v~~lvl~~~~~~~~~ 295 (451)
++++++++++.+++++++.++++++|||+||.++ ..+|..+|+++++++++++.+....
T Consensus 67 --------------------~~~~~~~~~~~~~~~~~~~~~~~~vg~s~gG~~~~~~~a~~~p~~v~~~v~~~~~~~~~~ 126 (271)
T d1va4a_ 67 --------------------NDYDTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFG 126 (271)
T ss_dssp --------------------CSHHHHHHHHHHHHHHHTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCB
T ss_pred --------------------cccccccccceeeeeecCCCcceeeccccccccccccccccccceeeEEEeecccccccc
Confidence 7999999999999999999999999999998765 5566778999999999997643211
Q ss_pred CCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCC--CChHHHHHHHHhhc--cChh-HH
Q 013006 296 SPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHA--TNVDTVFTRILETT--QHPA-AA 370 (451)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~-~~ 370 (451)
... .+.... .......+....... ............+.... .............. .... ..
T Consensus 127 ~~~-----------~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (271)
T d1va4a_ 127 QKP-----------DYPQGV-PLDVFARFKTELLKD--RAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATV 192 (271)
T ss_dssp CBT-----------TBTTSB-CHHHHHHHHHHHHHH--HHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHH
T ss_pred cch-----------hhhhhh-hhhHHHHHHHHhhhh--hhhhhhhhcchhhcccchhhhhhhHHHHHHhhhhhhhhhhhh
Confidence 100 000000 011111111111000 01111112222221111 11111111111111 1111 11
Q ss_pred HHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHH-HHHCCCCcEEEeCCCCCCccccChHHHHhh
Q 013006 371 ASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQV-KRQVPEAPYYEISPAGHCPHDEVPEVCSLC 449 (451)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l-~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~ 449 (451)
....... ..+....+.++++|+++|+|++|.+++++...++ ++.+|++++++++++||++++|+|+++++.
T Consensus 193 ~~~~~~~--------~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~ 264 (271)
T d1va4a_ 193 DCVTAFA--------ETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNED 264 (271)
T ss_dssp HHHHHHH--------HCCCHHHHHHCCSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHH
T ss_pred hcccccc--------hhhhhhhhhhcccceeecccCCCCCCCHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHH
Confidence 1111111 0122334567899999999999999998876555 567799999999999999999999999987
Q ss_pred h
Q 013006 450 L 450 (451)
Q Consensus 450 I 450 (451)
|
T Consensus 265 i 265 (271)
T d1va4a_ 265 L 265 (271)
T ss_dssp H
T ss_pred H
Confidence 6
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=99.98 E-value=2e-31 Score=250.01 Aligned_cols=279 Identities=15% Similarity=0.099 Sum_probs=176.6
Q ss_pred CCCccceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCC
Q 013006 132 APITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKE 211 (451)
Q Consensus 132 ~~~~~~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~ 211 (451)
.+..+.+++..||.+|+|+.+|++ ++|||||+||+++++..|..++..|+++|+||++|+||||.|++.....
T Consensus 9 ~p~~~~~v~~~dG~~i~y~~~G~~--~g~pvvllHG~~~~~~~w~~~~~~l~~~~~vi~~D~rG~G~S~~~~~~~----- 81 (313)
T d1wm1a_ 9 AAYDSGWLDTGDGHRIYWELSGNP--NGKPAVFIHGGPGGGISPHHRQLFDPERYKVLLFDQRGCGRSRPHASLD----- 81 (313)
T ss_dssp CCSEEEEEECSSSCEEEEEEEECT--TSEEEEEECCTTTCCCCGGGGGGSCTTTEEEEEECCTTSTTCBSTTCCT-----
T ss_pred CCCcCCEEEeCCCcEEEEEEecCC--CCCeEEEECCCCCcccchHHHHHHhhcCCEEEEEeCCCccccccccccc-----
Confidence 356778888899999999999964 6789999999999999999999999999999999999999997654432
Q ss_pred CCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 212 GDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 212 ~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
.++...+++|+..+++++++++++++|||+||.+++.+|..+|++|++++++++..
T Consensus 82 ------------------------~~~~~~~~~d~~~~~~~~~~~~~~~vg~s~g~~~~~~~a~~~~~~v~~~v~~~~~~ 137 (313)
T d1wm1a_ 82 ------------------------NNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFT 137 (313)
T ss_dssp ------------------------TCSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred ------------------------ccchhhHHHHHHhhhhccCCCcceeEeeecCCchhhHHHHHHhhhheeeeeccccc
Confidence 27899999999999999999999999999999999999999999999999999754
Q ss_pred CCCC--------CCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHh-cCChHHHHHHHHHHh----hcCCCChHHHHH
Q 013006 292 FWGF--------SPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQK-ISDPESIAEVLKQVY----ADHATNVDTVFT 358 (451)
Q Consensus 292 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 358 (451)
.... ..................... ............ ............... ...........
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 213 (313)
T d1wm1a_ 138 LRKQRLHWYYQDGASRFFPEKWERVLSILSDDE---RKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRES- 213 (313)
T ss_dssp CCHHHHHHHHTSSGGGTSHHHHHHHHTTSCTTG---GGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGG-
T ss_pred ccccccccccccccchhhhhhhhhhhhhhhhhh---hhhhhhhhhhcccchhhhhhhhhhhhhhhhhhhhhhcccchhh-
Confidence 2100 000000000000000000000 000000000000 011111111000000 00000000000
Q ss_pred HHHhhccChhHHHH----H-HHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCC
Q 013006 359 RILETTQHPAAAAS----F-ASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISP 433 (451)
Q Consensus 359 ~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~ 433 (451)
........... . ...................++.+++||++|+|++|.++|++.++++++.+|+++++++++
T Consensus 214 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~D~~~p~~~~~~l~~~~p~a~~~~i~~ 290 (313)
T d1wm1a_ 214 ---ASFGEDDFALAFARIENHYFTHLGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWPEAELHIVEG 290 (313)
T ss_dssp ---GGGGCHHHHHHHHHHHHHHHHTGGGCSSTTHHHHTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHCTTSEEEEETT
T ss_pred ---hhhhhhhHHhhhhhhhhhhhhhhcccccchhhhhhhhhhCCCCEEEEEECCCCccCHHHHHHHHHHCCCCEEEEECC
Confidence 00000000000 0 000111111112223334556789999999999999999999999999999999999999
Q ss_pred CCCCccccChHHHHhhh
Q 013006 434 AGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 434 ~gH~~~~e~p~~v~~~I 450 (451)
+||++ ++|+.++++|
T Consensus 291 aGH~~--~eP~~~~~lv 305 (313)
T d1wm1a_ 291 AGHSY--DEPGILHQLM 305 (313)
T ss_dssp CCSST--TSHHHHHHHH
T ss_pred CCCCc--CCchHHHHHH
Confidence 99975 4688877654
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=3.7e-32 Score=250.12 Aligned_cols=238 Identities=16% Similarity=0.194 Sum_probs=155.9
Q ss_pred EEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCC
Q 013006 147 VHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGD 226 (451)
Q Consensus 147 l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~ 226 (451)
|+|+..|. ..++|||+||++.+...|..+++.|+++|+|+++|+||||.|+....
T Consensus 2 i~y~~~G~---g~~~lvllHG~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~---------------------- 56 (256)
T d1m33a_ 2 IWWQTKGQ---GNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFGA---------------------- 56 (256)
T ss_dssp CCEEEECC---CSSEEEEECCTTCCGGGGGGTHHHHHTTSEEEEECCTTSTTCCSCCC----------------------
T ss_pred eEEEEECC---CCCeEEEECCCCCCHHHHHHHHHHHhCCCEEEEEeCCCCCCcccccc----------------------
Confidence 68888885 34789999999999999999999999999999999999999974322
Q ss_pred CCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHh
Q 013006 227 KAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLA 306 (451)
Q Consensus 227 ~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 306 (451)
+++.+++ +.+..+..++++++||||||.+++.+|.++|+++++++++++.+...........
T Consensus 57 ----------~~~~d~~----~~~~~~~~~~~~l~GhS~Gg~ia~~~a~~~p~~~~~l~~~~~~~~~~~~~~~~~~---- 118 (256)
T d1m33a_ 57 ----------LSLADMA----EAVLQQAPDKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGI---- 118 (256)
T ss_dssp ----------CCHHHHH----HHHHTTSCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSB----
T ss_pred ----------ccccccc----cccccccccceeeeecccchHHHHHHHHhCCcccceeeeeecccccccchhhhhh----
Confidence 4555444 4445567899999999999999999999999999999999976532211110000
Q ss_pred hhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCC---CChHHH---HHHHHhhccChhH--HHHHHHHHh
Q 013006 307 RILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHA---TNVDTV---FTRILETTQHPAA--AASFASIMF 378 (451)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~ 378 (451)
.......+...+. ......+........ ...... ............. .......+.
T Consensus 119 ----------~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (256)
T d1m33a_ 119 ----------KPDVLAGFQQQLS------DDQQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILK 182 (256)
T ss_dssp ----------CHHHHHHHHHHHH------HHHHHHHHHHHHTTSTTSTTHHHHHHHHHHHHHTSCCCCHHHHHHHHHHHH
T ss_pred ----------HHHHHHHHHhhhh------hhhHHHHHHHhhhhhccccchhhHHHHHHHhhhhcchhhHHHHHhhhhhhc
Confidence 0011111111100 001111111111111 111111 1111111111111 111111111
Q ss_pred cCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 379 APQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 379 ~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
. .+....++++++|+++|+|++|.++|++..+.+++.+|++++++++++||++++|+|++|++.|
T Consensus 183 ~-------~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~l~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l 247 (256)
T d1m33a_ 183 T-------VDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLL 247 (256)
T ss_dssp H-------CCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-CTTTCTTCEEEEETTCCSCHHHHSHHHHHHHH
T ss_pred c-------cchHHHHHhccCCccccccccCCCCCHHHHHHHHHHCCCCEEEEECCCCCchHHHCHHHHHHHH
Confidence 1 1223456779999999999999999999999999999999999999999999999999999887
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=2.4e-31 Score=238.23 Aligned_cols=191 Identities=21% Similarity=0.247 Sum_probs=153.0
Q ss_pred cceeeecCCeEEEEeecCCC-CCCCCcEEEecCCCCChhcHHH--HHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCC
Q 013006 136 SCFWEWKPKFNVHYEKAGCE-NVNSPPVLFLPGFGVGSFHYEK--QLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKE 211 (451)
Q Consensus 136 ~~~~~~~~g~~l~y~~~g~~-~~~~p~VlllHG~~~~~~~~~~--~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~ 211 (451)
..+++ -+|.+|+|+..++. .+.+++|||+||++.+...|.. ++..|++ +|+|+++|+||||.|+.......
T Consensus 8 e~~i~-v~G~~i~y~~~~~~~~~~~~~vvllHG~~~~~~~w~~~~~~~~la~~gy~via~D~~G~G~S~~~~~~~~---- 82 (208)
T d1imja_ 8 EGTIQ-VQGQALFFREALPGSGQARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAPAP---- 82 (208)
T ss_dssp CCCEE-ETTEEECEEEEECSSSCCSCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCCSSC----
T ss_pred EEEEE-ECCEEEEEEEecCCCCCCCCeEEEECCCCCChhHHhhhHHHHHHHHcCCeEEEeecccccCCCCCCcccc----
Confidence 34444 47999999998874 3457899999999999999987 4677754 79999999999999976543321
Q ss_pred CCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 212 GDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 212 ~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
++....++++.++++.++.++++|+||||||.+++.+|.++|++++++|++++..
T Consensus 83 -------------------------~~~~~~~~~l~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lV~~~p~~ 137 (208)
T d1imja_ 83 -------------------------IGELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPIC 137 (208)
T ss_dssp -------------------------TTSCCCTHHHHHHHHHHTCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSC
T ss_pred -------------------------cchhhhhhhhhhcccccccccccccccCcHHHHHHHHHHHhhhhcceeeecCccc
Confidence 3444556678888999999999999999999999999999999999999998742
Q ss_pred CCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHH
Q 013006 292 FWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAA 371 (451)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (451)
. ++
T Consensus 138 ~------------------------------------------~~----------------------------------- 140 (208)
T d1imja_ 138 T------------------------------------------DK----------------------------------- 140 (208)
T ss_dssp G------------------------------------------GG-----------------------------------
T ss_pred c------------------------------------------cc-----------------------------------
Confidence 1 00
Q ss_pred HHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhhC
Q 013006 372 SFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCLL 451 (451)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~Il 451 (451)
.....+.++++|+|+|+|++|.++|.+. +..+.+|++++.+++++||.+++|+|+++++.|+
T Consensus 141 ----------------~~~~~~~~i~~P~Lii~G~~D~~~~~~~--~~~~~~~~~~~~~i~~~gH~~~~~~p~~~~~~l~ 202 (208)
T d1imja_ 141 ----------------INAANYASVKTPALIVYGDQDPMGQTSF--EHLKQLPNHRVLIMKGAGHPCYLDKPEEWHTGLL 202 (208)
T ss_dssp ----------------SCHHHHHTCCSCEEEEEETTCHHHHHHH--HHHTTSSSEEEEEETTCCTTHHHHCHHHHHHHHH
T ss_pred ----------------cccccccccccccccccCCcCcCCcHHH--HHHHhCCCCeEEEECCCCCchhhhCHHHHHHHHH
Confidence 0001134579999999999999887653 4556789999999999999999999999998763
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=99.97 E-value=3.5e-29 Score=233.10 Aligned_cols=264 Identities=14% Similarity=0.108 Sum_probs=162.1
Q ss_pred ceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchh
Q 013006 137 CFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTE 216 (451)
Q Consensus 137 ~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~ 216 (451)
.+++ .+|.+|+|.+.| ++|+|||+||++++...|..+++.|+++|+|+++|+||||.|+........
T Consensus 11 ~fi~-~~g~~i~y~~~G----~g~~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~-------- 77 (298)
T d1mj5a_ 11 KFIE-IKGRRMAYIDEG----TGDPILFQHGNPTSSYLWRNIMPHCAGLGRLIACDLIGMGDSDKLDPSGPE-------- 77 (298)
T ss_dssp EEEE-ETTEEEEEEEES----CSSEEEEECCTTCCGGGGTTTGGGGTTSSEEEEECCTTSTTSCCCSSCSTT--------
T ss_pred EEEE-ECCEEEEEEEEc----CCCcEEEECCCCCCHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCcccccc--------
Confidence 3444 489999999999 468999999999999999999999999999999999999999876543211
Q ss_pred hhhccccCCCCCCccccccccCHHHHHHHHHHHHHH-hCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCC
Q 013006 217 EKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKE-VIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGF 295 (451)
Q Consensus 217 ~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~-l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~ 295 (451)
.+...+..+++..++.. .+.+++++|||||||.+++.+|.++|++|++++++++.+....
T Consensus 78 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l~~~~~~~~~~~ 138 (298)
T d1mj5a_ 78 -------------------RYAYAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIE 138 (298)
T ss_dssp -------------------SSCHHHHHHHHHHHHHHTTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBC
T ss_pred -------------------ccccchhhhhhccccccccccccCeEEEecccchhHHHHHHHHHhhhheeecccccccccc
Confidence 14556666666665554 4678999999999999999999999999999999998653211
Q ss_pred CCCCCCchHHhhhcCCCCCCCChHHHHHHHHH--HHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccC-hhHHHH
Q 013006 296 SPNPIRSPKLARILPWSGTFPLPASVRKLIEF--IWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQH-PAAAAS 372 (451)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 372 (451)
........... ....... ................. ....... ............. ......
T Consensus 139 ~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 202 (298)
T d1mj5a_ 139 WADFPEQDRDL--------------FQAFRSQAGEELVLQDNVFVEQVLPG-LILRPLS-EAEMAAYREPFLAAGEARRP 202 (298)
T ss_dssp GGGSCGGGHHH--------------HHHHHSTTHHHHHTTTCHHHHTHHHH-TSSSCCC-HHHHHHHHGGGCSSSGGGHH
T ss_pred chhhhhhhhhh--------------hhhhhhhhhhhhhhhhhhhhhhhccc-cccccch-hhhhhhhhhhhccchhhhhh
Confidence 11000000000 0000000 00000000011111111 1111111 1111111111111 111111
Q ss_pred HHHHHhcCC-CC-C-----chhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHH
Q 013006 373 FASIMFAPQ-GN-L-----SFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEV 445 (451)
Q Consensus 373 ~~~~~~~~~-~~-~-----~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~ 445 (451)
......... .. . ...+....+..+++|+++++|++|.+.+ ...+++.+.+|+++++++ ++||++++|+|++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~-~~~~~~~~~~p~~~~~~~-~~GH~~~~e~P~~ 280 (298)
T d1mj5a_ 203 TLSWPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEPGALTT-GRMRDFCRTWPNQTEITV-AGAHFIQEDSPDE 280 (298)
T ss_dssp HHHTGGGSCBTTBSHHHHHHHHHHHHHHTTCCSCEEEEEEEECSSSS-HHHHHHHTTCSSEEEEEE-EESSCGGGTCHHH
T ss_pred hhhhhhhhhhcchhhhhhhhhhhhhhhhhhcceeEEEEecCCCCcCh-HHHHHHHHHCCCCEEEEe-CCCCchHHhCHHH
Confidence 110000000 00 0 0123334567889999999999998665 556788889999887766 5799999999999
Q ss_pred HHhhh
Q 013006 446 CSLCL 450 (451)
Q Consensus 446 v~~~I 450 (451)
|++.|
T Consensus 281 v~~~i 285 (298)
T d1mj5a_ 281 IGAAI 285 (298)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99876
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=99.97 E-value=9.4e-31 Score=238.04 Aligned_cols=246 Identities=14% Similarity=0.072 Sum_probs=154.6
Q ss_pred CCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccccc
Q 013006 159 SPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAY 237 (451)
Q Consensus 159 ~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 237 (451)
+++|||+||+++++..|+.+++.|++ ||+|+++|+||||.|+.+... .+
T Consensus 2 G~~vvllHG~~~~~~~w~~~~~~L~~~g~~vi~~Dl~G~G~S~~~~~~------------------------------~~ 51 (258)
T d1xkla_ 2 GKHFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEE------------------------------LR 51 (258)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEECCCTTSTTCCCCGGG------------------------------CC
T ss_pred CCcEEEECCCCCCHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCC------------------------------Cc
Confidence 68999999999999999999999965 799999999999999754332 27
Q ss_pred CHHHHHHHHHHHHHHhCC-CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCC
Q 013006 238 SVDLWQDQVCYFIKEVIR-EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFP 316 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l~~-~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (451)
+++++++|+..+++.... ++++++||||||.+++.++.++|++++++|++++...........................
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~lvghS~Gg~va~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (258)
T d1xkla_ 52 TLYDYTLPLMELMESLSADEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLD 131 (258)
T ss_dssp SHHHHHHHHHHHHHTSCSSSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTT
T ss_pred chHHHHHHHhhhhhcccccccccccccchhHHHHHHHhhhhccccceEEEecccCCCcccchHHHHHHHhhhhhhhhhhh
Confidence 899999999999998866 5899999999999999999999999999999997643211111000000000000000000
Q ss_pred ChHHHHHH-HHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhc-cChhHHHHHHHHHhcCCCCCchhHHhhhcc
Q 013006 317 LPASVRKL-IEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETT-QHPAAAASFASIMFAPQGNLSFREALSRCQ 394 (451)
Q Consensus 317 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 394 (451)
........ ..........+ ............ ........... ........+ ...+....+.
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~ 194 (258)
T d1xkla_ 132 TQFLPYGSPEEPLTSMFFGP----KFLAHKLYQLCS--PEDLALASSLVRPSSLFMEDL-----------SKAKYFTDER 194 (258)
T ss_dssp CEEEECSCTTSCCEEEECCH----HHHHHHTSTTSC--HHHHHHHHHHCCCBCCCHHHH-----------HHCCCCCTTT
T ss_pred hhhhhhhhhhhhcccccccH----HHHHHHhhhccc--HHHHHHhhhhhhhhhhhhhhh-----------hhhhhccccc
Confidence 00000000 00000000000 000000000000 00000000000 000000000 0011122345
Q ss_pred CCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhhC
Q 013006 395 MNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCLL 451 (451)
Q Consensus 395 ~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~Il 451 (451)
.+++|+++|+|++|.++|++..+.+++.+|++++++++++||++++|+|+++++.|+
T Consensus 195 ~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~P~~~~~~l~ 251 (258)
T d1xkla_ 195 FGSVKRVYIVCTEDKGIPEEFQRWQIDNIGVTEAIEIKGADHMAMLCEPQKLCASLL 251 (258)
T ss_dssp GGGSCEEEEEETTCTTTTHHHHHHHHHHHCCSEEEEETTCCSCHHHHSHHHHHHHHH
T ss_pred ccccceeEeeecCCCCCCHHHHHHHHHHCCCCEEEEECCCCCchHHhCHHHHHHHHH
Confidence 678999999999999999999999999999999999999999999999999999873
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=99.96 E-value=1e-29 Score=231.68 Aligned_cols=242 Identities=13% Similarity=0.108 Sum_probs=151.2
Q ss_pred EEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHH
Q 013006 162 VLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVD 240 (451)
Q Consensus 162 VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~ 240 (451)
.|||||++.++..|+.+++.|++ +|+|+++|+||||.|+.+... .++++
T Consensus 5 ~vliHG~~~~~~~w~~~~~~L~~~g~~Via~Dl~G~G~S~~~~~~------------------------------~~~~~ 54 (256)
T d3c70a1 5 FVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEE------------------------------IGSFD 54 (256)
T ss_dssp EEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGG------------------------------CCSHH
T ss_pred EEEeCCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCC------------------------------CCCHH
Confidence 58999999999999999999965 799999999999999754322 27999
Q ss_pred HHHHHHHHHHHHhC-CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChH
Q 013006 241 LWQDQVCYFIKEVI-REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPA 319 (451)
Q Consensus 241 ~~a~dv~~ll~~l~-~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (451)
++++++.++++++. .++++|+||||||.+++.+|.++|++|+++|++++..............................
T Consensus 55 ~~~~~l~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (256)
T d3c70a1 55 EYSEPLLTFLEALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFT 134 (256)
T ss_dssp HHTHHHHHHHHHSCTTCCEEEEEETTHHHHHHHHHHHHGGGEEEEEEESCCCCCSSSCTTHHHHHHHHHSCCCTTCEEEE
T ss_pred HHHHHhhhhhhhhccccceeecccchHHHHHHHHhhcCchhhhhhheeccccCCcccchhhHhhhhhhhhhhhhhhHHHh
Confidence 99999999998875 68899999999999999999999999999999997542211111000000000000000000000
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCC
Q 013006 320 SVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVP 399 (451)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 399 (451)
..... ........................+............ .. ..... ..........+++|
T Consensus 135 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~-------~~~~~~~~~~~~~P 197 (256)
T d3c70a1 135 YTKDG-----KEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGS-LF----QNILA-------KRPFFTKEGYGSIK 197 (256)
T ss_dssp EEETT-----EEEEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCBC-CC----HHHHT-------TSCCCCTTTGGGSC
T ss_pred hhccc-----cccchhhhhhhhhhhhhhhhcchhhHHHhhhhhhhhh-HH----Hhhhh-------hcchhhhhhccccc
Confidence 00000 0000000000011111111110000110000000000 00 00000 00111223446899
Q ss_pred EEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 400 ICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 400 vLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
+++|+|++|.+++++..+++.+.+|++++++++++||++++|+|+++++.|
T Consensus 198 ~l~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~agH~~~~e~P~~~~~~l 248 (256)
T d3c70a1 198 KIYVWTDQDEIFLPEFQLWQIENYKPDKVYKVEGGDHKLQLTKTKEIAEIL 248 (256)
T ss_dssp EEEEECTTCSSSCHHHHHHHHHHSCCSEEEECCSCCSCHHHHSHHHHHHHH
T ss_pred eeEEeecCCCCCCHHHHHHHHHHCCCCEEEEECCCCCchHHhCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999876
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.95 E-value=7.1e-28 Score=233.29 Aligned_cols=304 Identities=13% Similarity=0.084 Sum_probs=170.4
Q ss_pred CCCCccceeeecCCeEEEE--eecC----CCCCCCCcEEEecCCCCChhcHHH------HHHhh-cCCceEEEEcCCCCC
Q 013006 131 GAPITSCFWEWKPKFNVHY--EKAG----CENVNSPPVLFLPGFGVGSFHYEK------QLKDL-GKDYRAWAIDFLGQG 197 (451)
Q Consensus 131 ~~~~~~~~~~~~~g~~l~y--~~~g----~~~~~~p~VlllHG~~~~~~~~~~------~~~~L-~~~~~Vi~~D~rG~G 197 (451)
+.+....++++.||..|.. ...+ ..+.++|+|||+||+++++..|.. ++..| .+||+|+++|+||||
T Consensus 24 ~y~~e~h~v~t~DG~~l~~~ri~~~~~~~~~~~~~~~vlllHG~~~~~~~~~~~~~~~sla~~L~~~Gy~V~~~D~rG~G 103 (377)
T d1k8qa_ 24 GYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNT 103 (377)
T ss_dssp TCCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTST
T ss_pred CCCceEEEEEcCCCCEEEEEEecCCCCCCccCCCCCeEEEECCCccchhHHhhcCccchHHHHHHHCCCEEEEEcCCCCC
Confidence 5566677888999966543 3222 223457899999999999999954 56666 458999999999999
Q ss_pred CCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhC
Q 013006 198 MSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACN 277 (451)
Q Consensus 198 ~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~ 277 (451)
.|+.+....+.. .....|.+. .+..+++.+++..+++.++.++++|+||||||++++.+|.++
T Consensus 104 ~S~~~~~~~~~~-------~~~~~~~~~----------~~~~~Dl~~~i~~i~~~~g~~~v~lvGhS~GG~ia~~~a~~~ 166 (377)
T d1k8qa_ 104 WARRNLYYSPDS-------VEFWAFSFD----------EMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTN 166 (377)
T ss_dssp TSCEESSSCTTS-------TTTTCCCHH----------HHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHC
T ss_pred CCCCCCCCCCcc-------hhhccCCHH----------HHhhhhHHHHHHHHHHHcCCCCEEEEEecchHHHHHHHHHhh
Confidence 998654432211 011111110 134556777888888999999999999999999999999999
Q ss_pred CCccceEEEeccCCCCCCCCCCCCchH-Hh--------hhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhc
Q 013006 278 PHLVKGVTLLNATPFWGFSPNPIRSPK-LA--------RILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYAD 348 (451)
Q Consensus 278 P~~v~~lvl~~~~~~~~~~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (451)
|+++++++++................. +. .........+................................
T Consensus 167 p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (377)
T d1k8qa_ 167 PKLAKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGF 246 (377)
T ss_dssp HHHHTTEEEEEEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCC
T ss_pred hhhhhhceeEeeccccccccchhhHHHHHHhcchhhhhhhhhhhhccchhHHHHhhhhhhcchhhhhHHHHhhhhhhcCC
Confidence 999999988776543222111111100 00 000000011111111111111100001111111111111111
Q ss_pred CCCCh-HHHHHHHHhhccChhHHHHH---HHHH-hcCCCCCch-------------hHHhhhccCCCCCEEEEeeCCCCC
Q 013006 349 HATNV-DTVFTRILETTQHPAAAASF---ASIM-FAPQGNLSF-------------REALSRCQMNGVPICLIYGKEDPW 410 (451)
Q Consensus 349 ~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~-------------~~~~~~l~~i~~PvLii~G~~D~~ 410 (451)
..... ......+............+ .... ......++. ......++++++|+|+|+|++|.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~vPvL~i~G~~D~~ 326 (377)
T d1k8qa_ 247 DTMNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLL 326 (377)
T ss_dssp CGGGSCGGGHHHHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSS
T ss_pred CcccccHHHhhhhhhcccccchHHHHHHHHHHHhcCcchhccchhhhhhhhhhcccCchhhhHhhCCCCEEEEEeCCCCc
Confidence 11110 11111111111111111111 1100 000000000 011224678999999999999999
Q ss_pred CChHHHHHHHHHCCCC-cEEEeCCCCCCcc---ccChHHHHhhhC
Q 013006 411 VKPVWGLQVKRQVPEA-PYYEISPAGHCPH---DEVPEVCSLCLL 451 (451)
Q Consensus 411 v~~~~~~~l~~~lp~~-~~~~i~~~gH~~~---~e~p~~v~~~Il 451 (451)
++++..+++.+.+|+. ++++++++||+.+ .+.+++|.+.|+
T Consensus 327 ~~~~~~~~l~~~lp~~~~~~~i~~~GH~d~~~~~~a~~~v~~~I~ 371 (377)
T d1k8qa_ 327 ADPHDVDLLLSKLPNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIV 371 (377)
T ss_dssp SCHHHHHHHHTTCTTEEEEEEETTCCTTHHHHCTTHHHHTHHHHH
T ss_pred cCHHHHHHHHHHCCCCeEEEEeCCCCCcchhhccchHHHHHHHHH
Confidence 9999999999999985 6788999999843 467888877663
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=99.95 E-value=1.1e-27 Score=218.38 Aligned_cols=249 Identities=17% Similarity=0.170 Sum_probs=143.8
Q ss_pred CeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccc
Q 013006 144 KFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLW 222 (451)
Q Consensus 144 g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w 222 (451)
+.+|||...+. ++|+|||+||+++++..|..+++.|++ +|+|+++|+||||.|.......
T Consensus 4 ~~~lh~~~~~~---~~P~ivllHG~~~~~~~~~~~~~~L~~~g~~vi~~Dl~G~G~s~~~~~~~---------------- 64 (264)
T d1r3da_ 4 SNQLHFAKPTA---RTPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHGTNPERHCDN---------------- 64 (264)
T ss_dssp CEEEESSCCBT---TBCEEEEECCTTCCGGGGHHHHHHHTTSSCEEEEECCTTCSSCC----------------------
T ss_pred CCeEEEcCCCC---CCCeEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEEecccccccccccccc----------------
Confidence 46788877664 568999999999999999999999975 7999999999999997544321
Q ss_pred cCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCc
Q 013006 223 GFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRS 302 (451)
Q Consensus 223 ~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~ 302 (451)
+.......+...+......++++++||||||.+++.+|.++|+++.+++++...+...... ..
T Consensus 65 --------------~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~~~~~~~~~~~~~~~~~~~~~---~~ 127 (264)
T d1r3da_ 65 --------------FAEAVEMIEQTVQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQ---EN 127 (264)
T ss_dssp ---------------CHHHHHHHHHHHTTCCTTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCC---SH
T ss_pred --------------cchhhhhhhhcccccccccCceeeeeecchHHHHHHHHHhCchhccccccccccCCCcccc---ch
Confidence 2333334444444444566899999999999999999999999999999887654211110 00
Q ss_pred hHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcC--CCChHHHHHHHHhhccChhHHHHHHHHHhcC
Q 013006 303 PKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADH--ATNVDTVFTRILETTQHPAAAASFASIMFAP 380 (451)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (451)
....... .......... . ... ........+... ..................... .........
T Consensus 128 ~~~~~~~---------~~~~~~~~~~-~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 192 (264)
T d1r3da_ 128 EEKAARW---------QHDQQWAQRF-S-QQP---IEHVLSDWYQQAVFSSLNHEQRQTLIAQRSANLGS-SVAHMLLAT 192 (264)
T ss_dssp HHHHHHH---------HHHHHHHHHH-H-HSC---HHHHHHHHTTSGGGTTCCHHHHHHHHHHHTTSCHH-HHHHHHHHT
T ss_pred hhhhhhh---------hhhhhhhhhh-h-hhh---hhhhhhhhhhhhhhcccchHHHHHHHHHHhhhhhh-hhHHhhhhc
Confidence 0000000 0000000000 0 000 111111111100 011111222222211111111 111111100
Q ss_pred CCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 381 QGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 381 ~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
...........+..+++|+++|+|++|..+ ..+++ .+++++++++++||++++|+|++|++.|
T Consensus 193 -~~~~~~~~~~~l~~~~~p~l~i~G~~D~~~-----~~~~~-~~~~~~~~i~~~gH~~~~e~P~~~~~~i 255 (264)
T d1r3da_ 193 -SLAKQPYLLPALQALKLPIHYVCGEQDSKF-----QQLAE-SSGLSYSQVAQAGHNVHHEQPQAFAKIV 255 (264)
T ss_dssp -CGGGCCCCHHHHHTCSSCEEEEEETTCHHH-----HHHHH-HHCSEEEEETTCCSCHHHHCHHHHHHHH
T ss_pred -cccccccchhhhhccCcceEEEEeCCcHHH-----HHHHh-cCCCeEEEECCCCCchHHHCHHHHHHHH
Confidence 011112233455678999999999999543 23333 3689999999999999999999999876
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=99.95 E-value=1.9e-27 Score=233.71 Aligned_cols=282 Identities=12% Similarity=0.014 Sum_probs=169.8
Q ss_pred ceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-C------ceEEEEcCCCCCCCCCCCCCCCCC
Q 013006 137 CFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-D------YRAWAIDFLGQGMSLPDEDPTPRS 209 (451)
Q Consensus 137 ~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~------~~Vi~~D~rG~G~S~~~~~~~~~~ 209 (451)
.|.+.-||++|||...+...++++||||+||++++...|..+++.|++ + |+||++|+||||.|+.+....
T Consensus 84 ~f~~~i~G~~iHf~h~~~~~~~~~pLlLlHG~P~s~~~w~~vi~~La~~g~~~~~~f~VIaPDLpG~G~S~~P~~~~--- 160 (394)
T d1qo7a_ 84 QFTTEIEGLTIHFAALFSEREDAVPIALLHGWPGSFVEFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPPLDK--- 160 (394)
T ss_dssp EEEEEETTEEEEEEEECCSCTTCEEEEEECCSSCCGGGGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCCCSSS---
T ss_pred CeEEEECCEEEEEEEEeccCCCCCEEEEeccccccHHHHHHHHHhhccccCCcccceeeecccccccCCCCCCCCCC---
Confidence 344556999999987776667889999999999999999999999965 3 999999999999998764432
Q ss_pred CCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEecc
Q 013006 210 KEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNA 289 (451)
Q Consensus 210 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~ 289 (451)
.|++..+++++..+++.++.++++++|||+||.++..+++.+|+++.++++++.
T Consensus 161 --------------------------~y~~~~~a~~~~~l~~~lg~~~~~~vg~~~Gg~v~~~~a~~~p~~~~~~~l~~~ 214 (394)
T d1qo7a_ 161 --------------------------DFGLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNLC 214 (394)
T ss_dssp --------------------------CCCHHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred --------------------------ccCHHHHHHHHHHHHhhccCcceEEEEecCchhHHHHHHHHhhccccceeEeee
Confidence 289999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCCCCCCc--h-HH---hhhcCCCCCCCChHHHHH--HHHHHHHhcCChHHHHHHHHHHhhc---CCCChHHHHH
Q 013006 290 TPFWGFSPNPIRS--P-KL---ARILPWSGTFPLPASVRK--LIEFIWQKISDPESIAEVLKQVYAD---HATNVDTVFT 358 (451)
Q Consensus 290 ~~~~~~~~~~~~~--~-~~---~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 358 (451)
.+........... . .. .....+............ ...........+......+...+.. .....+....
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~ 294 (394)
T d1qo7a_ 215 AMRAPPEGPSIESLSAAEKEGIARMEKFMTDGLAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSETILE 294 (394)
T ss_dssp CCCSCSSSCCGGGSCHHHHHHHHHHHHHHHHSCHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHSCSSCCCHHHHHH
T ss_pred cccccccccccccchhhhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhhcccccchhhhHHHHHhhhcccccCCHHHHHH
Confidence 6432211110000 0 00 000000000000000000 0000000001111112111111111 1111122222
Q ss_pred HHHhhccChhHHHHHHHHHhcCCC--CCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC-CcEEEeCCCC
Q 013006 359 RILETTQHPAAAASFASIMFAPQG--NLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE-APYYEISPAG 435 (451)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~-~~~~~i~~~g 435 (451)
..............+..+...... ............+|++|+++++|.+|...++. .+.+.+++ ..+.+++++|
T Consensus 295 ~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~i~vPtlv~~g~~D~~~~p~---~~~~~~~~~~~~~~~~~~G 371 (394)
T d1qo7a_ 295 MVSLYWLTESFPRAIHTYRETTPTASAPNGATMLQKELYIHKPFGFSFFPKDLCPVPR---SWIATTGNLVFFRDHAEGG 371 (394)
T ss_dssp HHHHHHHTTCHHHHGGGHHHHCC---------CTTTTTCEEEEEEEEECTBSSSCCCH---HHHGGGEEEEEEEECSSCB
T ss_pred HHHHHhhccccchhHHHHHHHhhcccccchhhhhccCCcccCCeEEEEeCCCccccHH---HHHHhccCceEEEEcCCcC
Confidence 221111111111111111111000 00111122234567899999999999887764 34555555 4577899999
Q ss_pred CCccccChHHHHhhh
Q 013006 436 HCPHDEVPEVCSLCL 450 (451)
Q Consensus 436 H~~~~e~p~~v~~~I 450 (451)
|++++|+|+++++.|
T Consensus 372 Hf~~~E~Pe~~a~~I 386 (394)
T d1qo7a_ 372 HFAALERPRELKTDL 386 (394)
T ss_dssp SCHHHHCHHHHHHHH
T ss_pred CchHHhCHHHHHHHH
Confidence 999999999999887
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=99.93 E-value=2.4e-25 Score=210.47 Aligned_cols=233 Identities=14% Similarity=0.149 Sum_probs=151.2
Q ss_pred CccceeeecCCeEEEEeecCCCC---CCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCC-CCCCCCCCCCCC
Q 013006 134 ITSCFWEWKPKFNVHYEKAGCEN---VNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQ-GMSLPDEDPTPR 208 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y~~~g~~~---~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~-G~S~~~~~~~~~ 208 (451)
+.+..++..||.+|++...-|.+ +.+++||++||++.+...|..+++.|++ ||+|+++|+||| |.|+....
T Consensus 4 ~~~h~~~~~dg~~l~~w~~~p~~~~~~~~~~Vvi~HG~~~~~~~~~~~a~~L~~~G~~Vi~~D~rGh~G~S~g~~~---- 79 (302)
T d1thta_ 4 TIAHVLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSID---- 79 (302)
T ss_dssp CEEEEEEETTTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGGGGHHHHHHHHTTTCCEEEECCCBCC------------
T ss_pred eeeeEEEcCCCCEEEEEEecCcCCCCCCCCEEEEeCCCcchHHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccc----
Confidence 44677888999999998875532 3457899999999999999999999965 799999999998 78764221
Q ss_pred CCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh---CCCCEEEEEeCcchHHHHHHHHhCCCccceEE
Q 013006 209 SKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV---IREPVYVVGNSLGGFVAVYFAACNPHLVKGVT 285 (451)
Q Consensus 209 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l---~~~~v~lvGhS~GG~val~~A~~~P~~v~~lv 285 (451)
.+++.++.+|+.++++.+ +.++++|+||||||.+++.+|.. ..++++|
T Consensus 80 ---------------------------~~~~~~~~~dl~~vi~~l~~~~~~~i~lvG~SmGG~ial~~A~~--~~v~~li 130 (302)
T d1thta_ 80 ---------------------------EFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISD--LELSFLI 130 (302)
T ss_dssp ---------------------------CCCHHHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHTTT--SCCSEEE
T ss_pred ---------------------------CCCHHHHHHHHHHHHHhhhccCCceeEEEEEchHHHHHHHHhcc--cccceeE
Confidence 168888888888887776 57899999999999999998864 4589999
Q ss_pred EeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhcc
Q 013006 286 LLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQ 365 (451)
Q Consensus 286 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (451)
++++.+.. .......+.+.... . .... +....... .
T Consensus 131 ~~~g~~~~--------~~~~~~~~~~~~~~----------------~-~~~~----~~~~~~~~---------------~ 166 (302)
T d1thta_ 131 TAVGVVNL--------RDTLEKALGFDYLS----------------L-PIDE----LPNDLDFE---------------G 166 (302)
T ss_dssp EESCCSCH--------HHHHHHHHSSCGGG----------------S-CGGG----CCSEEEET---------------T
T ss_pred eecccccH--------HHHHHHHHhhccch----------------h-hhhh----cccccccc---------------c
Confidence 99875310 00001111000000 0 0000 00000000 0
Q ss_pred ChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC--CCcEEEeCCCCCCccccCh
Q 013006 366 HPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP--EAPYYEISPAGHCPHDEVP 443 (451)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp--~~~~~~i~~~gH~~~~e~p 443 (451)
.......+........ ..........+.++++|+|+++|++|.+|+++.++++.+.++ +.++++++|++|.+. |+|
T Consensus 167 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~PvLii~G~~D~~V~~~~~~~l~~~i~s~~~kl~~~~g~~H~l~-e~~ 244 (302)
T d1thta_ 167 HKLGSEVFVRDCFEHH-WDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLG-ENL 244 (302)
T ss_dssp EEEEHHHHHHHHHHTT-CSSHHHHHHHHTTCCSCEEEEEETTCTTSCHHHHHHHHTTCTTCCEEEEEETTCCSCTT-SSH
T ss_pred cchhhHHHHHHHHHhH-HHHHHHHHHHHhhcCCCEEEEEeCCCCccCHHHHHHHHHhCCCCCceEEEecCCCcccc-cCh
Confidence 0000001111111000 111234455678899999999999999999999999999886 478999999999864 555
Q ss_pred HH
Q 013006 444 EV 445 (451)
Q Consensus 444 ~~ 445 (451)
+.
T Consensus 245 ~~ 246 (302)
T d1thta_ 245 VV 246 (302)
T ss_dssp HH
T ss_pred HH
Confidence 53
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=3.2e-26 Score=209.61 Aligned_cols=99 Identities=17% Similarity=0.203 Sum_probs=90.8
Q ss_pred CCcEEEecCCCCChhcHHHHHHhhcC---CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccc
Q 013006 159 SPPVLFLPGFGVGSFHYEKQLKDLGK---DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASEL 235 (451)
Q Consensus 159 ~p~VlllHG~~~~~~~~~~~~~~L~~---~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 235 (451)
.+||||+||+++++..|..+++.|.+ +|+|+++|+||||.|..+.
T Consensus 2 ~~PvvllHG~~~~~~~~~~~~~~l~~~~~~~~v~~~d~~G~g~S~~~~-------------------------------- 49 (268)
T d1pjaa_ 2 YKPVIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRPL-------------------------------- 49 (268)
T ss_dssp CCCEEEECCTTCCGGGGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCH--------------------------------
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCcc--------------------------------
Confidence 47899999999999999999999964 6999999999999997532
Q ss_pred ccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCC-ccceEEEeccC
Q 013006 236 AYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPH-LVKGVTLLNAT 290 (451)
Q Consensus 236 ~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~-~v~~lvl~~~~ 290 (451)
.++++++++++.+++++++ ++++|+||||||.+|+.+|.++|+ +|+++|++++.
T Consensus 50 ~~~~~~~~~~l~~~l~~l~-~~~~lvGhS~GG~ia~~~a~~~p~~~v~~lvl~~~~ 104 (268)
T d1pjaa_ 50 WEQVQGFREAVVPIMAKAP-QGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSP 104 (268)
T ss_dssp HHHHHHHHHHHHHHHHHCT-TCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCC
T ss_pred ccCHHHHHHHHHHHHhccC-CeEEEEccccHHHHHHHHHHHCCccccceEEEECCC
Confidence 2789999999999999998 999999999999999999999998 69999999974
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.93 E-value=7.7e-25 Score=196.45 Aligned_cols=212 Identities=17% Similarity=0.196 Sum_probs=136.9
Q ss_pred CCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccccc
Q 013006 159 SPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAY 237 (451)
Q Consensus 159 ~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 237 (451)
+++|||+||++++...|..+++.|++ ||+|+++|+||||.|...... .
T Consensus 11 ~~~vvliHG~~~~~~~~~~l~~~L~~~G~~v~~~D~~G~G~s~~~~~~-------------------------------~ 59 (242)
T d1tqha_ 11 ERAVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVH-------------------------------T 59 (242)
T ss_dssp SCEEEEECCTTCCTHHHHHHHHHHHHTTCEEEECCCTTSSSCHHHHTT-------------------------------C
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEeCCCCccccccccc-------------------------------c
Confidence 57899999999999999999999965 799999999999998543221 3
Q ss_pred CHHHHHHHHH---HHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCCC
Q 013006 238 SVDLWQDQVC---YFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGT 314 (451)
Q Consensus 238 s~~~~a~dv~---~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (451)
+..+..+++. ..++..+.++++++||||||.+++.++.++|.. .++++++...... .
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~~~~--~~~~~~~~~~~~~-------~----------- 119 (242)
T d1tqha_ 60 GPDDWWQDVMNGYEFLKNKGYEKIAVAGLSLGGVFSLKLGYTVPIE--GIVTMCAPMYIKS-------E----------- 119 (242)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHTTSCCS--CEEEESCCSSCCC-------H-----------
T ss_pred chhHHHHHHHHHHhhhhhcccCceEEEEcchHHHHhhhhcccCccc--ccccccccccccc-------h-----------
Confidence 4444444444 444666789999999999999999999999854 4566665432100 0
Q ss_pred CCChHHHHHHHHH----HHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHh
Q 013006 315 FPLPASVRKLIEF----IWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREAL 390 (451)
Q Consensus 315 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (451)
.......... ...................... .......... .....
T Consensus 120 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~---------~~~~~ 170 (242)
T d1tqha_ 120 ---ETMYEGVLEYAREYKKREGKSEEQIEQEMEKFKQTP-----------------MKTLKALQEL---------IADVR 170 (242)
T ss_dssp ---HHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHTTSC-----------------CTTHHHHHHH---------HHHHH
T ss_pred ---hHHHHHHHHHHHHHhhhccchhhhHHHHHhhhhhhc-----------------cchhhccccc---------ccccc
Confidence 0001111110 0000001111111111000000 0000000000 02234
Q ss_pred hhccCCCCCEEEEeeCCCCCCChHHHHHHHHHC--CCCcEEEeCCCCCCcccc-ChHHHHhhh
Q 013006 391 SRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQV--PEAPYYEISPAGHCPHDE-VPEVCSLCL 450 (451)
Q Consensus 391 ~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l--p~~~~~~i~~~gH~~~~e-~p~~v~~~I 450 (451)
..+..+++|+|+++|++|.+++++.++.+.+.+ +++++++++++||++++| .|+++++.|
T Consensus 171 ~~~~~~~~p~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i 233 (242)
T d1tqha_ 171 DHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHEDI 233 (242)
T ss_dssp HTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCCSSEEEEEETTCCSSGGGSTTHHHHHHHH
T ss_pred cccceeccccceeecccCCccCHHHHHHHHHHcCCCCcEEEEECCCCCcCccccCHHHHHHHH
Confidence 456778999999999999999999999999988 457899999999999987 589888766
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.86 E-value=1e-21 Score=180.85 Aligned_cols=108 Identities=10% Similarity=0.011 Sum_probs=84.8
Q ss_pred cCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhcc
Q 013006 142 KPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFL 221 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~ 221 (451)
.+|.+|.+...+.+ +++||||+||+++++..|..+++.| +++|+++|+||+|.|.
T Consensus 10 ~~~~~l~~l~~~~~--~~~Pl~l~Hg~~gs~~~~~~l~~~L--~~~v~~~d~~g~~~~~--------------------- 64 (286)
T d1xkta_ 10 PEGPTLMRLNSVQS--SERPLFLVHPIEGSTTVFHSLASRL--SIPTYGLQCTRAAPLD--------------------- 64 (286)
T ss_dssp TTSCSEEECCCCCC--CSCCEEEECCTTCCCGGGHHHHHTC--SSCEEEECCCTTSCCS---------------------
T ss_pred CCCCEEEEecCCCC--CCCeEEEECCCCccHHHHHHHHHHc--CCeEEEEeCCCCCCCC---------------------
Confidence 34566776666643 5678999999999999999999999 4889999999999873
Q ss_pred ccCCCCCCccccccccCHHHHHHHHHHH-HHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 222 WGFGDKAQPWASELAYSVDLWQDQVCYF-IKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 222 w~~~~~~~~~~~~~~~s~~~~a~dv~~l-l~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
++++++++.... ++..+.++++|+||||||.+|+.+|.++|++++++++++..
T Consensus 65 ----------------~~~~~a~~~~~~~~~~~~~~~~~lvGhS~Gg~vA~~~A~~~p~~~~~v~~l~~~ 118 (286)
T d1xkta_ 65 ----------------SIHSLAAYYIDCIRQVQPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSL 118 (286)
T ss_dssp ----------------CHHHHHHHHHHHHHHHCCSSCCEEEEETHHHHHHHHHHHHHHHC------CCEE
T ss_pred ----------------CHHHHHHHHHHHHHHhcCCCceEEeecCCccHHHHHHHHHHHHcCCCceeEEEe
Confidence 677888777654 44556789999999999999999999999999998877753
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=99.85 E-value=6.8e-20 Score=175.64 Aligned_cols=291 Identities=11% Similarity=0.105 Sum_probs=173.7
Q ss_pred CCeEEEEeecCCCCCCC-CcEEEecCCCCChhc---HHHHH---Hhh-cCCceEEEEcCCCCCCCCC-CCCCCCCCCCCC
Q 013006 143 PKFNVHYEKAGCENVNS-PPVLFLPGFGVGSFH---YEKQL---KDL-GKDYRAWAIDFLGQGMSLP-DEDPTPRSKEGD 213 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~-p~VlllHG~~~~~~~---~~~~~---~~L-~~~~~Vi~~D~rG~G~S~~-~~~~~~~~~~~~ 213 (451)
+.++|.|+.+|..|.++ +.||+.|++.+++.. |..++ +.| .+.|.||++|..|.|.++. +..+.+..
T Consensus 27 ~~~~laY~t~G~ln~~~~NaVlv~h~ltg~~~~~~WW~~liG~g~alDt~kyfVI~~n~lG~~~gst~p~s~~p~~---- 102 (376)
T d2vata1 27 RDVPVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDA---- 102 (376)
T ss_dssp EEEEEEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTT----
T ss_pred CCceEEEEeecccCCCCCCEEEEcCCCcCCccccccHHHhCCCCCccCccceEEEEeccCCCCcCCCCCCCCCccc----
Confidence 35899999999866554 678889999877643 45554 234 3469999999999886543 22221100
Q ss_pred chhhhhccccCCCCCCccc-cccccCHHHHHHHHHHHHHHhCCCCEE-EEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 214 STEEKNFLWGFGDKAQPWA-SELAYSVDLWQDQVCYFIKEVIREPVY-VVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 214 ~~~~~~~~w~~~~~~~~~~-~~~~~s~~~~a~dv~~ll~~l~~~~v~-lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
....+|. ....+|+.|+++..+.++++|+++++. +||.||||+.|+++|..||++|+++|.+++.+
T Consensus 103 ------------~~~~~yg~~FP~~ti~D~v~aq~~ll~~LGI~~l~aViG~SmGGmqal~wa~~~Pd~v~~li~Ia~~~ 170 (376)
T d2vata1 103 ------------EGQRPYGAKFPRTTIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSC 170 (376)
T ss_dssp ------------C--CBCGGGCCCCCHHHHHHHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCS
T ss_pred ------------ccCCcccccCCcchhHHHHHHHHHHHHHhCcceEEEeecccHHHHHHHHHHHhchHHHhhhccccccc
Confidence 0001121 122489999999999999999999975 78999999999999999999999999999875
Q ss_pred CCCCCCCC---CCchHHhhhcCCCCC-C---CCh-HHHHHHHHHHHHhcCChHHHHHHHHHHhh----------------
Q 013006 292 FWGFSPNP---IRSPKLARILPWSGT-F---PLP-ASVRKLIEFIWQKISDPESIAEVLKQVYA---------------- 347 (451)
Q Consensus 292 ~~~~~~~~---~~~~~~~~~~~~~~~-~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 347 (451)
........ .....+..-..|.+. + ..| ..+.............++.+.+.+.....
T Consensus 171 ~~s~~~~a~~~~~~~ai~~Dp~w~~G~Y~~~~~p~~GL~~Ar~~~~~ty~S~~~~~~rf~~~~~~~~gr~~~~~~~~~~~ 250 (376)
T d2vata1 171 RQSGWCAAWFETQRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEI 250 (376)
T ss_dssp BCCHHHHHHHHHHHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC--------------
T ss_pred ccchHHHHHHHHHHHHhhccccccCCCccccchhHHHHHHHHHHHHHHhcCHHHHHHHHhhccccccccccccchhhhcc
Confidence 21000000 000001111223211 1 112 22333333233333344433332200000
Q ss_pred --c----------CCCChHHHHH----HHHhhccChhHHHHHHHHHhcCCCCCch-hHHhhhccCCCCCEEEEeeCCCCC
Q 013006 348 --D----------HATNVDTVFT----RILETTQHPAAAASFASIMFAPQGNLSF-REALSRCQMNGVPICLIYGKEDPW 410 (451)
Q Consensus 348 --~----------~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~PvLii~G~~D~~ 410 (451)
. .....+..+. .+... .++...-.+...+......... .+....+++|++|+|+|.++.|.+
T Consensus 251 ~~~~~~~~~~~~~~~~~vesyL~~~g~k~~~r-fDansyl~l~~a~d~~Di~~~~~g~l~~aL~~I~a~~LvI~~~sD~l 329 (376)
T d2vata1 251 NGTDSGNSHRAGQPIEAVSSYLRYQAQKFAAS-FDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGL 329 (376)
T ss_dssp -------------CGGGHHHHHHHHHHHHHHS-SCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSS
T ss_pred cccccccccccccchhHHHHHHHHHHhhhhcc-cccccHHHHHHHHHhcccccccCCCHHHHHhhCCCCEEEEEeCcccC
Confidence 0 0001111111 11111 1222222223333222111111 234556889999999999999999
Q ss_pred CChHHHHHHHHHCCCCcEEEeC-CCCCCccccChHHHHhhh
Q 013006 411 VKPVWGLQVKRQVPEAPYYEIS-PAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 411 v~~~~~~~l~~~lp~~~~~~i~-~~gH~~~~e~p~~v~~~I 450 (451)
.|++..+++++.+|++++.+|+ ..||..++..++++.+.|
T Consensus 330 FPp~~~~e~a~~l~~a~~~~I~S~~GHDaFL~e~~~~~~~I 370 (376)
T d2vata1 330 YSFDEHVEMGRSIPNSRLCVVDTNEGHDFFVMEADKVNDAV 370 (376)
T ss_dssp SCHHHHHHHHHHSTTEEEEECCCSCGGGHHHHTHHHHHHHH
T ss_pred cCHHHHHHHHHhcCCCeEEEECCCCCccccccCHHHHHHHH
Confidence 9999999999999999999998 469988777889888765
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=99.85 E-value=2.2e-20 Score=177.87 Aligned_cols=289 Identities=13% Similarity=0.154 Sum_probs=173.4
Q ss_pred CCeEEEEeecCCCCCCC-CcEEEecCCCCChhc---------HHHHH---Hhh-cCCceEEEEcCCCCCCCCCCC-CCCC
Q 013006 143 PKFNVHYEKAGCENVNS-PPVLFLPGFGVGSFH---------YEKQL---KDL-GKDYRAWAIDFLGQGMSLPDE-DPTP 207 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~-p~VlllHG~~~~~~~---------~~~~~---~~L-~~~~~Vi~~D~rG~G~S~~~~-~~~~ 207 (451)
+.++|.|+.+|..|+++ +.||+.|++.+++.. |+.++ ..| .+.|.||++|..|.|.++.++ ...+
T Consensus 22 ~~~~laY~t~G~ln~~~~NaVlv~h~~tg~~~~~~~~~~~gWW~~liG~g~alDt~kyfVI~~n~lG~~~gSs~p~s~~p 101 (357)
T d2b61a1 22 SYINVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINP 101 (357)
T ss_dssp CSEEEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBCT
T ss_pred CCceEEEEeecccCCCCCCEEEEcCCCCccccccccCCCCCcHHHhcCCCCccCCCceEEEEecccCCccccCCcCCCCC
Confidence 46999999999876655 788999999887654 45554 234 346999999999987754322 2111
Q ss_pred CCCCCCchhhhhccccCCCCCCcc-ccccccCHHHHHHHHHHHHHHhCCCCEE-EEEeCcchHHHHHHHHhCCCccceEE
Q 013006 208 RSKEGDSTEEKNFLWGFGDKAQPW-ASELAYSVDLWQDQVCYFIKEVIREPVY-VVGNSLGGFVAVYFAACNPHLVKGVT 285 (451)
Q Consensus 208 ~~~~~~~~~~~~~~w~~~~~~~~~-~~~~~~s~~~~a~dv~~ll~~l~~~~v~-lvGhS~GG~val~~A~~~P~~v~~lv 285 (451)
.. .+++ .....+++.|+++....++++|+++++. +||.||||+.|+++|.+||++|+++|
T Consensus 102 ~t------------------g~~~g~~FP~iti~D~v~aq~~Ll~~LGI~~l~~viG~SmGGmqAl~wa~~~Pd~v~~~i 163 (357)
T d2b61a1 102 QT------------------GKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIV 163 (357)
T ss_dssp TT------------------SSBCGGGCCCCCHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEE
T ss_pred CC------------------CCCCCcccccchhHHHHHHHHHHHHHhCcceEEEEecccHHHHHHHHHHHhhhHHHhhhc
Confidence 10 0111 1122489999999999999999999985 67999999999999999999999999
Q ss_pred EeccCCCCCCCCCCC---CchHHhhhcCCCCC-C---CChHHHHHHHHH-HHHhcCChHHHHHHHHHHhhcCC------C
Q 013006 286 LLNATPFWGFSPNPI---RSPKLARILPWSGT-F---PLPASVRKLIEF-IWQKISDPESIAEVLKQVYADHA------T 351 (451)
Q Consensus 286 l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------~ 351 (451)
.+++++......... ....+..-..|... + ..|..-....+. .......+....+.+.+...... .
T Consensus 164 ~i~~~a~~s~~~~~~~~~~~~aI~~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~~f~r~~~~~~~~~~~~~ 243 (357)
T d2b61a1 164 NLCSSIYFSAEAIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYF 243 (357)
T ss_dssp EESCCSSCCHHHHHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCB
T ss_pred ccccccccchhHHHHHHHHHHHHHcCCCCCCCCcccCCCchhHHHHHHHHHHhhccCHHHHHHHhccccccccccccchh
Confidence 999864210000000 00001111222211 1 112221222222 12222333333332221111100 0
Q ss_pred ChHHHHH----HHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC--
Q 013006 352 NVDTVFT----RILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE-- 425 (451)
Q Consensus 352 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~-- 425 (451)
..+.... .+... .++.....+...+..........+....|++|++|+|+|..+.|.+.||+..+++++.+++
T Consensus 244 ~vesyL~~~g~kf~~r-fDan~yl~l~~a~~~~D~~~~~~~l~~aL~~I~a~vLvi~~~sD~lFpp~~~~~~a~~l~~~~ 322 (357)
T d2b61a1 244 QVESYLSYQGKKFLER-FDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSG 322 (357)
T ss_dssp HHHHHHHHHHHHHHTT-CCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHhh-CCHHHHHHHHHHhhhcccccccccHHHHHhhcCCCEEEEEeCCccccCHHHHHHHHHHHHhcC
Confidence 1111111 11111 2333333333333322222223455667889999999999999999999999888888763
Q ss_pred --CcEEEeCCC-CCCccccChHHHHhhh
Q 013006 426 --APYYEISPA-GHCPHDEVPEVCSLCL 450 (451)
Q Consensus 426 --~~~~~i~~~-gH~~~~e~p~~v~~~I 450 (451)
+++++++.. ||..++..++++.+.|
T Consensus 323 ~~v~~~~I~S~~GHdafL~e~~~~~~~I 350 (357)
T d2b61a1 323 VDLHFYEFPSDYGHDAFLVDYDQFEKRI 350 (357)
T ss_dssp CEEEEEEECCTTGGGHHHHCHHHHHHHH
T ss_pred CCeEEEEECCCCCccccCcCHHHHHHHH
Confidence 578889864 9998888888887765
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=99.85 E-value=2.8e-20 Score=179.61 Aligned_cols=212 Identities=17% Similarity=0.143 Sum_probs=139.0
Q ss_pred CCeEEEEeecCCCC-CCCCcEEEecCCCCChhcHHHHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhc
Q 013006 143 PKFNVHYEKAGCEN-VNSPPVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNF 220 (451)
Q Consensus 143 ~g~~l~y~~~g~~~-~~~p~VlllHG~~~~~~~~~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~ 220 (451)
+|.+|......|.. .+.|+||++||+.++.+.|..+...| .+||.|+++|+||||.|.......
T Consensus 114 dg~~l~g~l~~P~~~~~~P~Vi~~hG~~~~~e~~~~~~~~l~~~G~~vl~~D~~G~G~s~~~~~~~-------------- 179 (360)
T d2jbwa1 114 DGIPMPVYVRIPEGPGPHPAVIMLGGLESTKEESFQMENLVLDRGMATATFDGPGQGEMFEYKRIA-------------- 179 (360)
T ss_dssp TTEEEEEEEECCSSSCCEEEEEEECCSSCCTTTTHHHHHHHHHTTCEEEEECCTTSGGGTTTCCSC--------------
T ss_pred CCcccceEEEecCCCCCceEEEEeCCCCccHHHHHHHHHHHHhcCCEEEEEccccccccCcccccc--------------
Confidence 68888887776543 24588999999999888888888877 458999999999999996432211
Q ss_pred cccCCCCCCccccccccCHHHHHHHHHHHHHHh---CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCC
Q 013006 221 LWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV---IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSP 297 (451)
Q Consensus 221 ~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l---~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~ 297 (451)
.+.+..+..+.+++... +.++|.|+||||||.+++.+|+.+| +|+++|.+++.......
T Consensus 180 ----------------~~~~~~~~~v~d~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~~p-ri~a~V~~~~~~~~~~~- 241 (360)
T d2jbwa1 180 ----------------GDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEP-RLAACISWGGFSDLDYW- 241 (360)
T ss_dssp ----------------SCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCSCSTTG-
T ss_pred ----------------ccHHHHHHHHHHHHHhcccccccceeehhhhcccHHHHHHhhcCC-CcceEEEEcccccHHHH-
Confidence 35566666666666654 3468999999999999999999988 69999998875321100
Q ss_pred CCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHH
Q 013006 298 NPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIM 377 (451)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (451)
.. ...... ..+... ......+.........
T Consensus 242 ---------------~~--~~~~~~-----------------~~~~~~--~~~~~~~~~~~~~~~~-------------- 271 (360)
T d2jbwa1 242 ---------------DL--ETPLTK-----------------ESWKYV--SKVDTLEEARLHVHAA-------------- 271 (360)
T ss_dssp ---------------GG--SCHHHH-----------------HHHHHH--TTCSSHHHHHHHHHHH--------------
T ss_pred ---------------hh--hhhhhh-----------------HHHHHh--ccCCchHHHHHHHHhh--------------
Confidence 00 000000 000000 0001111111100000
Q ss_pred hcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC--CcEEEeCCCCCCccccChHHHH
Q 013006 378 FAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE--APYYEISPAGHCPHDEVPEVCS 447 (451)
Q Consensus 378 ~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~--~~~~~i~~~gH~~~~e~p~~v~ 447 (451)
.+....+.+++||+|+++|++|. +|++.++++.+.+++ .++.++++++|+.+ +.+.+..
T Consensus 272 ---------~~~~~~~~~i~~P~Lii~G~~D~-vp~~~~~~l~~~~~~~~~~l~~~~~g~H~~~-~~~~~~~ 332 (360)
T d2jbwa1 272 ---------LETRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPAEHLNLVVEKDGDHCCH-NLGIRPR 332 (360)
T ss_dssp ---------TCCTTTGGGCCSCEEEEEETTSS-SCTHHHHHHHHHSCGGGEEEEEETTCCGGGG-GGTTHHH
T ss_pred ---------cchhhhHhhCCCCEEEEEeCCCC-cCHHHHHHHHHhcCCCCeEEEEECCCCcCCC-cChHHHH
Confidence 01122356789999999999998 699999999999975 45677799999755 3444443
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.84 E-value=1.2e-20 Score=164.54 Aligned_cols=164 Identities=18% Similarity=0.254 Sum_probs=115.3
Q ss_pred CcEEEecCCCCChhc--HHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccc
Q 013006 160 PPVLFLPGFGVGSFH--YEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELA 236 (451)
Q Consensus 160 p~VlllHG~~~~~~~--~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 236 (451)
..|||+||++++... |..+...|+ +||.|+++|+||+|.+
T Consensus 2 k~V~~vHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~p~~~~~------------------------------------- 44 (186)
T d1uxoa_ 2 KQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPNPLQP------------------------------------- 44 (186)
T ss_dssp CEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCSCTTSC-------------------------------------
T ss_pred CEEEEECCCCCCcchhHHHHHHHHHHhCCCEEEEeccCCCCcc-------------------------------------
Confidence 479999999988654 566777784 5899999999999865
Q ss_pred cCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCC
Q 013006 237 YSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFP 316 (451)
Q Consensus 237 ~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (451)
..+++++.+...++. ..++++|+||||||.+++.++.++|+.....+++...++....+.. .....
T Consensus 45 -~~~~~~~~l~~~~~~-~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~--------- 110 (186)
T d1uxoa_ 45 -RLEDWLDTLSLYQHT-LHENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTL---QMLDE--------- 110 (186)
T ss_dssp -CHHHHHHHHHTTGGG-CCTTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTC---GGGGG---------
T ss_pred -hHHHHHHHHHHHHhc-cCCCcEEEEechhhHHHHHHHHhCCccceeeEEeecccccccchhh---hhhhh---------
Confidence 466777777665543 3478999999999999999999999765555555544321111000 00000
Q ss_pred ChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccCC
Q 013006 317 LPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMN 396 (451)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 396 (451)
+... ...... ...+
T Consensus 111 -----------------------------~~~~---------------------------------~~~~~~----~~~~ 124 (186)
T d1uxoa_ 111 -----------------------------FTQG---------------------------------SFDHQK----IIES 124 (186)
T ss_dssp -----------------------------GTCS---------------------------------CCCHHH----HHHH
T ss_pred -----------------------------hhcc---------------------------------cccccc----cccC
Confidence 0000 000001 1123
Q ss_pred CCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCcccc
Q 013006 397 GVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDE 441 (451)
Q Consensus 397 ~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e 441 (451)
.+|+++|+|++|+++|++.++++++.+ ++++++++++||+...+
T Consensus 125 ~~p~lvi~g~~D~~vp~~~~~~l~~~~-~~~~~~~~~~gH~~~~~ 168 (186)
T d1uxoa_ 125 AKHRAVIASKDDQIVPFSFSKDLAQQI-DAALYEVQHGGHFLEDE 168 (186)
T ss_dssp EEEEEEEEETTCSSSCHHHHHHHHHHT-TCEEEEETTCTTSCGGG
T ss_pred CCCEEEEecCCCCCCCHHHHHHHHHHc-CCEEEEeCCCCCcCccc
Confidence 679999999999999999999999988 68999999999987654
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=99.83 E-value=3.3e-19 Score=169.93 Aligned_cols=287 Identities=12% Similarity=0.114 Sum_probs=171.9
Q ss_pred CCeEEEEeecCCCCCCC-CcEEEecCCCCChh-------------cHHHHHH---hh-cCCceEEEEcCCCCCCCCCCCC
Q 013006 143 PKFNVHYEKAGCENVNS-PPVLFLPGFGVGSF-------------HYEKQLK---DL-GKDYRAWAIDFLGQGMSLPDED 204 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~-p~VlllHG~~~~~~-------------~~~~~~~---~L-~~~~~Vi~~D~rG~G~S~~~~~ 204 (451)
+.++|.|+.+|..|+++ +.||+.|++.+++. -|+.++- .| .+.|.||++|..|.|.|..++.
T Consensus 25 ~~~~l~Y~t~G~ln~~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gww~~liG~g~~lDt~~yfVI~~n~lG~~~~ss~~~ 104 (362)
T d2pl5a1 25 SPVVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGPL 104 (362)
T ss_dssp SSEEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSSTT
T ss_pred CCceEEEEeeeccCCCCCCEEEECCCCCcchhccccCCccCCCcchHHHhcCCCCccCccccEEEeeccccCcccccCcc
Confidence 46999999999766554 67888899987752 2555552 24 3469999999999988754332
Q ss_pred -CCCCCCCCCchhhhhccccCCCCCCccc-cccccCHHHHHHHHHHHHHHhCCCCEE-EEEeCcchHHHHHHHHhCCCcc
Q 013006 205 -PTPRSKEGDSTEEKNFLWGFGDKAQPWA-SELAYSVDLWQDQVCYFIKEVIREPVY-VVGNSLGGFVAVYFAACNPHLV 281 (451)
Q Consensus 205 -~~~~~~~~~~~~~~~~~w~~~~~~~~~~-~~~~~s~~~~a~dv~~ll~~l~~~~v~-lvGhS~GG~val~~A~~~P~~v 281 (451)
..+.. .++|. .....++.|+++..+.++++|+++++. +||.||||+.|+++|.+||++|
T Consensus 105 s~~p~~------------------~~~yg~~fP~~t~~D~v~~~~~ll~~LGI~~l~~viG~SmGGmqAl~wA~~yPd~v 166 (362)
T d2pl5a1 105 SIHPET------------------STPYGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPNSL 166 (362)
T ss_dssp SBCTTT------------------SSBCGGGSCCCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHHHSTTSE
T ss_pred cccccc------------------ccccCcCCccchhHHHHHHHHHHHHHhCcCeeEEEeehhHHHHHHHHHHHhCchHh
Confidence 11111 11221 112479999999999999999999988 6799999999999999999999
Q ss_pred ceEEEeccCCCCCCCCCCCCc-----hHHhhhcCCCC-CC--CChHHHHHHHHHH-HHhcCChHHHHHHHHHHhhcCCC-
Q 013006 282 KGVTLLNATPFWGFSPNPIRS-----PKLARILPWSG-TF--PLPASVRKLIEFI-WQKISDPESIAEVLKQVYADHAT- 351 (451)
Q Consensus 282 ~~lvl~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~- 351 (451)
+++|.+++++... +..... ..+..-..|.. .+ ..|..--++.+.+ ......++...+.+.+.......
T Consensus 167 ~~~v~ia~sa~~s--~~~~~~~~~~~~aI~~Dp~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~~~~~~~~ 244 (362)
T d2pl5a1 167 SNCIVMASTAEHS--AMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNIL 244 (362)
T ss_dssp EEEEEESCCSBCC--HHHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTT
T ss_pred hhhcccccccccC--HHHHHHHHHHHHHHhcCCccccCCcccCChhHHHHHHHHHHHHHHcCchhhhhhhcccccccccc
Confidence 9999999875310 000000 00111112221 11 0112111222222 22223344343333221111000
Q ss_pred ChHHHHHHHHhh-------ccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC
Q 013006 352 NVDTVFTRILET-------TQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP 424 (451)
Q Consensus 352 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp 424 (451)
......+.++.. ..++.....+...+....... ..+....+++|++|+|+|..+.|.+.|++..+++++.+|
T Consensus 245 ~~~~~ve~yl~~~g~k~~~rfDan~yl~l~~a~~~~Di~~-~~~l~~aL~~I~AkvLvi~~~sD~lFpp~~~~~~a~~l~ 323 (362)
T d2pl5a1 245 STDFAVGSYLIYQGESFVDRFDANSYIYVTKALDHYSLGK-GKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLE 323 (362)
T ss_dssp TTTTTSCGGGGSTTCCSSSCCCHHHHHHHHHHHHHCBCCS-HHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHhcCCHHHHHHHHhhhhcccccc-cccHHHHHhhCCCCEEEEEeCcccCcCHHHHHHHHHHHH
Confidence 000000011110 011222222222222222111 245666789999999999999999999999999999987
Q ss_pred CC----cEEEeCC-CCCCccccChHHHHhhh
Q 013006 425 EA----PYYEISP-AGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 425 ~~----~~~~i~~-~gH~~~~e~p~~v~~~I 450 (451)
++ ++++|+. .||..++..++++.+.|
T Consensus 324 ~a~~~v~~~eI~S~~GHdaFL~e~~~~~~~I 354 (362)
T d2pl5a1 324 AADKRVFYVELQSGEGHDSFLLKNPKQIEIL 354 (362)
T ss_dssp HTTCCEEEEEECCCBSSGGGGSCCHHHHHHH
T ss_pred hCCCCeEEEEeCCCCCcchhccCHHHHHHHH
Confidence 65 5677765 69999988888888765
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.83 E-value=1.6e-20 Score=162.90 Aligned_cols=161 Identities=17% Similarity=0.117 Sum_probs=128.3
Q ss_pred CCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccccc
Q 013006 159 SPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAY 237 (451)
Q Consensus 159 ~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 237 (451)
++||||+||++++...|..+++.|.+ +|.|+.+|.+|++.+.... ..
T Consensus 2 ~~PVv~vHG~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~--------------------------------~~ 49 (179)
T d1ispa_ 2 HNPVVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTN--------------------------------YN 49 (179)
T ss_dssp CCCEEEECCTTCCGGGGHHHHHHHHHTTCCGGGEEECCCSCTTCCH--------------------------------HH
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHHcCCeEEEEecCCcccccccc--------------------------------ch
Confidence 47899999999999999999999954 6999999999999885321 14
Q ss_pred CHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhC--CCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCC
Q 013006 238 SVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACN--PHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTF 315 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~--P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (451)
+.+++++++.+++++++.++++||||||||.++..++.++ |++|+++|+++++..... ..
T Consensus 50 ~~~~l~~~i~~~~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~~V~~~V~l~~p~~g~~---------------~~--- 111 (179)
T d1ispa_ 50 NGPVLSRFVQKVLDETGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTT---------------GK--- 111 (179)
T ss_dssp HHHHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTC---------------SB---
T ss_pred hhhhHHHHHHHHHHhcCCceEEEEeecCcCHHHHHHHHHcCCchhhCEEEEECCCCCCch---------------hh---
Confidence 6778889999999999999999999999999999999887 679999999987411000 00
Q ss_pred CChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccC
Q 013006 316 PLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQM 395 (451)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 395 (451)
.+ ......
T Consensus 112 -------------------------------------------------------------------~l-----~~~~~~ 119 (179)
T d1ispa_ 112 -------------------------------------------------------------------AL-----PGTDPN 119 (179)
T ss_dssp -------------------------------------------------------------------CC-----CCSCTT
T ss_pred -------------------------------------------------------------------hc-----CCcccc
Confidence 00 000112
Q ss_pred CCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHH
Q 013006 396 NGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVC 446 (451)
Q Consensus 396 i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v 446 (451)
..+|++.|+|+.|.++++..+ .+++++.+.+++.+|..++.+|+.+
T Consensus 120 ~~~~~~~i~~~~D~~v~~~~~-----~l~~~~~~~~~~~~H~~l~~~~~v~ 165 (179)
T d1ispa_ 120 QKILYTSIYSSADMIVMNYLS-----RLDGARNVQIHGVGHIGLLYSSQVN 165 (179)
T ss_dssp CCCEEEEEEETTCSSSCHHHH-----CCBTSEEEEESSCCTGGGGGCHHHH
T ss_pred cCceEEEEEecCCcccCchhh-----cCCCceEEEECCCCchhhccCHHHH
Confidence 468999999999999998643 5788999999999999988888644
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.83 E-value=3.2e-19 Score=168.02 Aligned_cols=246 Identities=11% Similarity=0.024 Sum_probs=146.3
Q ss_pred CccceeeecCCeEEEEeecCCCC-CCCCcEEEecCCCCChhcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCC
Q 013006 134 ITSCFWEWKPKFNVHYEKAGCEN-VNSPPVLFLPGFGVGSFHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKE 211 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y~~~g~~~-~~~p~VlllHG~~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~ 211 (451)
+....++..||.+|+....-|.+ .+.|+||++||++++...|..++..|+ +||.|+++|+||||.|........
T Consensus 56 ~~~v~~~~~dg~~i~~~l~~P~~~~~~P~vv~~HG~~~~~~~~~~~~~~la~~Gy~vi~~D~rG~G~s~~~~~~~~---- 131 (318)
T d1l7aa_ 56 VYRLTYKSFGNARITGWYAVPDKEGPHPAIVKYHGYNASYDGEIHEMVNWALHGYATFGMLVRGQQRSEDTSISPH---- 131 (318)
T ss_dssp EEEEEEEEGGGEEEEEEEEEESSCSCEEEEEEECCTTCCSGGGHHHHHHHHHTTCEEEEECCTTTSSSCCCCCCSS----
T ss_pred EEEEEEECCCCcEEEEEEEecCCCCCceEEEEecCCCCCccchHHHHHHHHHCCCEEEEEeeCCCCCCCCCcccch----
Confidence 33445666789999866554432 345889999999999999999998885 579999999999999975443211
Q ss_pred CCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh---C---CCCEEEEEeCcchHHHHHHHHhCCCccceEE
Q 013006 212 GDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV---I---REPVYVVGNSLGGFVAVYFAACNPHLVKGVT 285 (451)
Q Consensus 212 ~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l---~---~~~v~lvGhS~GG~val~~A~~~P~~v~~lv 285 (451)
...|+. ..................|....++.+ . ..++.++|+|+||..++..+...+. +++++
T Consensus 132 -------~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~v~~~~i~~~G~s~Gg~~~~~~~~~~~~-~~~~~ 201 (318)
T d1l7aa_ 132 -------GHALGW--MTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAV 201 (318)
T ss_dssp -------CCSSSS--TTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEE
T ss_pred -------hhhhcc--hhhchhhhhhhhhHHHHHHHHHHHHHHHhcccccCcceEEEeeccccHHHHHHhhcCcc-cceEE
Confidence 001111 111111111123334444444444433 2 2468999999999999999999874 66666
Q ss_pred EeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhcc
Q 013006 286 LLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQ 365 (451)
Q Consensus 286 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (451)
...+... ........... ... ...... .....
T Consensus 202 ~~~~~~~--------~~~~~~~~~~~---~~~------------------~~~~~~-------------------~~~~~ 233 (318)
T d1l7aa_ 202 ADYPYLS--------NFERAIDVALE---QPY------------------LEINSF-------------------FRRNG 233 (318)
T ss_dssp EESCCSC--------CHHHHHHHCCS---TTT------------------THHHHH-------------------HHHSC
T ss_pred Eeccccc--------cHHHHhhcccc---ccc------------------chhhhh-------------------hhccc
Confidence 5554310 00000000000 000 000000 00000
Q ss_pred ChhH-HHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC-CcEEEeCCCCCCccccCh
Q 013006 366 HPAA-AASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE-APYYEISPAGHCPHDEVP 443 (451)
Q Consensus 366 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~-~~~~~i~~~gH~~~~e~p 443 (451)
.... ...+.... . ......+.++++|+|+++|++|.++|++.+.++.+.++. .++++++++||....+..
T Consensus 234 ~~~~~~~~~~~~~-----~---~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~~~l~~~~~~gH~~~~~~~ 305 (318)
T d1l7aa_ 234 SPETEVQAMKTLS-----Y---FDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLETKKELKVYRYFGHEYIPAFQ 305 (318)
T ss_dssp CHHHHHHHHHHHH-----T---TCHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCSSCCHHHH
T ss_pred ccccccccccccc-----c---cccccccccCCCCEEEEEECCCCCcCHHHHHHHHHHcCCCcEEEEECCCCCCCcHHHH
Confidence 0000 00000000 0 122333467899999999999999999999999999874 789999999998877777
Q ss_pred HHHHhh
Q 013006 444 EVCSLC 449 (451)
Q Consensus 444 ~~v~~~ 449 (451)
+++.+.
T Consensus 306 ~~~~~f 311 (318)
T d1l7aa_ 306 TEKLAF 311 (318)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 766543
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.82 E-value=5.1e-19 Score=157.49 Aligned_cols=162 Identities=13% Similarity=0.057 Sum_probs=112.3
Q ss_pred CcEEEecCC---CCCh--hcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccc
Q 013006 160 PPVLFLPGF---GVGS--FHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWAS 233 (451)
Q Consensus 160 p~VlllHG~---~~~~--~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 233 (451)
+++|++|+. +++. ..+..++..|++ ||.|+++|+||+|.|.......
T Consensus 36 ~~~vl~Hph~~~GG~~~~~~~~~la~~l~~~G~~vlrfd~RG~G~S~g~~~~~--------------------------- 88 (218)
T d2fuka1 36 VTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSFDHG--------------------------- 88 (218)
T ss_dssp EEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSCCCTT---------------------------
T ss_pred cEEEEECCCCCCCcCCCChHHHHHHHHHHHcCCeEEEeecCCCccCCCccCcC---------------------------
Confidence 346778843 3332 235677788854 8999999999999997532210
Q ss_pred ccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCC
Q 013006 234 ELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSG 313 (451)
Q Consensus 234 ~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (451)
....+++...+..+.++...++++++||||||.+++.+|.+. .++++|++++...
T Consensus 89 --~~~~~D~~a~~~~~~~~~~~~~v~l~G~S~Gg~va~~~a~~~--~~~~lil~ap~~~--------------------- 143 (218)
T d2fuka1 89 --DGEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAG--------------------- 143 (218)
T ss_dssp --THHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBT---------------------
T ss_pred --cchHHHHHHHHHHHhhcccCceEEEEEEcccchhhhhhhccc--ccceEEEeCCccc---------------------
Confidence 012333333444444445678999999999999999998874 4889999987420
Q ss_pred CCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhc
Q 013006 314 TFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRC 393 (451)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 393 (451)
. +++. .
T Consensus 144 ~---------------------------------------------------------------------~~~~-----~ 149 (218)
T d2fuka1 144 R---------------------------------------------------------------------WDFS-----D 149 (218)
T ss_dssp T---------------------------------------------------------------------BCCT-----T
T ss_pred c---------------------------------------------------------------------hhhh-----c
Confidence 0 0000 0
Q ss_pred cCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC-CcEEEeCCCCCCccccChHHHHh
Q 013006 394 QMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE-APYYEISPAGHCPHDEVPEVCSL 448 (451)
Q Consensus 394 ~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~-~~~~~i~~~gH~~~~e~p~~v~~ 448 (451)
.++.+|+|+|+|++|.++|++..+++.+.+++ .+++++||++|++.- +-+++.+
T Consensus 150 ~~~~~P~Lvi~G~~D~~vp~~~~~~l~~~~~~~~~l~~i~ga~H~f~~-~~~~l~~ 204 (218)
T d2fuka1 150 VQPPAQWLVIQGDADEIVDPQAVYDWLETLEQQPTLVRMPDTSHFFHR-KLIDLRG 204 (218)
T ss_dssp CCCCSSEEEEEETTCSSSCHHHHHHHHTTCSSCCEEEEETTCCTTCTT-CHHHHHH
T ss_pred cccccceeeEecCCCcCcCHHHHHHHHHHccCCceEEEeCCCCCCCCC-CHHHHHH
Confidence 13578999999999999999999999887765 679999999998653 3344443
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.82 E-value=2.8e-20 Score=173.55 Aligned_cols=207 Identities=14% Similarity=0.114 Sum_probs=137.2
Q ss_pred CCCcEEEecCC--CCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccc
Q 013006 158 NSPPVLFLPGF--GVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASEL 235 (451)
Q Consensus 158 ~~p~VlllHG~--~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 235 (451)
.+|+|+|+||+ +++...|..++..|..+++|+++|+||||.|+...... .
T Consensus 59 ~~~~l~c~~~~~~~g~~~~y~~la~~L~~~~~V~al~~pG~~~~~~~~~~~----------------------------~ 110 (283)
T d2h7xa1 59 GRAVLVGCTGTAANGGPHEFLRLSTSFQEERDFLAVPLPGYGTGTGTGTAL----------------------------L 110 (283)
T ss_dssp CCCEEEEECCCCTTCSTTTTHHHHHTTTTTCCEEEECCTTCCBC---CBCC----------------------------E
T ss_pred CCceEEEeCCCCCCCCHHHHHHHHHhcCCCceEEEEeCCCCCCCCCCcccc----------------------------c
Confidence 56899999996 46678899999999999999999999999987543221 1
Q ss_pred ccCHHHHHHHHHH-HHHHhCCCCEEEEEeCcchHHHHHHHHhC----CCccceEEEeccCCCCCCCCCCCCchHHhhhcC
Q 013006 236 AYSVDLWQDQVCY-FIKEVIREPVYVVGNSLGGFVAVYFAACN----PHLVKGVTLLNATPFWGFSPNPIRSPKLARILP 310 (451)
Q Consensus 236 ~~s~~~~a~dv~~-ll~~l~~~~v~lvGhS~GG~val~~A~~~----P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 310 (451)
..+++++++++.+ +++.++..+++|+||||||.+|+.+|.++ ++.|++++++++.+... .....
T Consensus 111 ~~s~~~~a~~~~~~i~~~~~~~P~vL~GhS~GG~vA~e~A~~l~~~~g~~v~~LvL~d~~~~~~-------~~~~~---- 179 (283)
T d2h7xa1 111 PADLDTALDAQARAILRAAGDAPVVLLGHSGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGH-------QEPIE---- 179 (283)
T ss_dssp ESSHHHHHHHHHHHHHHHHTTSCEEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTC-------CHHHH----
T ss_pred cCCHHHHHHHHHHHHHHhcCCCceEEEEeccchHHHHHHHHhhHHHcCCCceEEEEecCCcccc-------ccchh----
Confidence 2589999998765 66778889999999999999999999875 46799999999864210 00000
Q ss_pred CCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCC-hHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHH
Q 013006 311 WSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATN-VDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREA 389 (451)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (451)
......... ........ .+..+.... ...... .
T Consensus 180 --------~~~~~~~~~-----------------~~~~~~~~~~~~~l~a~~----------~~~~~~-----------~ 213 (283)
T d2h7xa1 180 --------VWSRQLGEG-----------------LFAGELEPMSDARLLAMG----------RYARFL-----------A 213 (283)
T ss_dssp --------HTHHHHHHH-----------------HHHTCSSCCCHHHHHHHH----------HHHHHH-----------H
T ss_pred --------hhhhhhHHH-----------------hhcccccccccHHHHHHH----------HHHHHH-----------h
Confidence 000000000 00001110 011110000 000000 0
Q ss_pred hhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC-CcEEEeCCCCCCcc-ccChHHHHhhh
Q 013006 390 LSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE-APYYEISPAGHCPH-DEVPEVCSLCL 450 (451)
Q Consensus 390 ~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~-~~~~~i~~~gH~~~-~e~p~~v~~~I 450 (451)
......+++|+++|+|++|..++++....+.+.+++ .+++.+++ +|+.+ .|+|+++++.|
T Consensus 214 ~~~~~~~~~Pvl~i~g~~d~~~~~~~~~~w~~~~~~~~~~~~v~G-~H~~ml~e~~~~vA~~i 275 (283)
T d2h7xa1 214 GPRPGRSSAPVLLVRASEPLGDWQEERGDWRAHWDLPHTVADVPG-DHFTMMRDHAPAVAEAV 275 (283)
T ss_dssp SCCCCCCCSCEEEEEESSCSSCCCGGGCCCSCCCSSCSEEEEESS-CTTHHHHTTHHHHHHHH
T ss_pred hccccccCCCeEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEEEcC-CCcccccCCHHHHHHHH
Confidence 112356899999999999999998877777777765 57888875 89865 46899988765
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=99.82 E-value=1.2e-20 Score=151.15 Aligned_cols=95 Identities=18% Similarity=0.240 Sum_probs=83.0
Q ss_pred cCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhcc
Q 013006 142 KPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFL 221 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~ 221 (451)
-+|.+|+|...| ++|||||+||.. ..| .+.|+++|+|+++|+||||.|+.++
T Consensus 8 ~~G~~l~y~~~G----~G~pvlllHG~~---~~w---~~~L~~~yrvi~~DlpG~G~S~~p~------------------ 59 (122)
T d2dsta1 8 LYGLNLVFDRVG----KGPPVLLVAEEA---SRW---PEALPEGYAFYLLDLPGYGRTEGPR------------------ 59 (122)
T ss_dssp ETTEEEEEEEEC----CSSEEEEESSSG---GGC---CSCCCTTSEEEEECCTTSTTCCCCC------------------
T ss_pred ECCEEEEEEEEc----CCCcEEEEeccc---ccc---cccccCCeEEEEEeccccCCCCCcc------------------
Confidence 469999999999 589999999943 334 4568889999999999999996431
Q ss_pred ccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCC
Q 013006 222 WGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPH 279 (451)
Q Consensus 222 w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~ 279 (451)
++.+++++++.++++++++++++++||||||.+++.+++..+.
T Consensus 60 ---------------~s~~~~a~~i~~ll~~L~i~~~~viG~S~Gg~ia~~laa~~~~ 102 (122)
T d2dsta1 60 ---------------MAPEELAHFVAGFAVMMNLGAPWVLLRGLGLALGPHLEALGLR 102 (122)
T ss_dssp ---------------CCHHHHHHHHHHHHHHTTCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred ---------------cccchhHHHHHHHHHHhCCCCcEEEEeCccHHHHHHHHhhccc
Confidence 7999999999999999999999999999999999999997543
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.81 E-value=1.4e-20 Score=169.08 Aligned_cols=201 Identities=15% Similarity=0.084 Sum_probs=119.1
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAY 237 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 237 (451)
++++|||+||++++...|..+++.|. +|.|+++|++|+|.+
T Consensus 16 ~~~~l~~lhg~~g~~~~~~~la~~L~-~~~v~~~~~~g~~~~-------------------------------------- 56 (230)
T d1jmkc_ 16 QEQIIFAFPPVLGYGLMYQNLSSRLP-SYKLCAFDFIEEEDR-------------------------------------- 56 (230)
T ss_dssp CSEEEEEECCTTCCGGGGHHHHHHCT-TEEEEEECCCCSTTH--------------------------------------
T ss_pred CCCeEEEEcCCCCCHHHHHHHHHHCC-CCEEeccCcCCHHHH--------------------------------------
Confidence 46899999999999999999999995 699999999988632
Q ss_pred CHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEE---EeccCCCCCCCCCCCCchHHhhhcCCCCC
Q 013006 238 SVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVT---LLNATPFWGFSPNPIRSPKLARILPWSGT 314 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lv---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (451)
.+++++++. +....++++|+||||||.+|+.+|.++|+++..++ .+++...... .. ...+.
T Consensus 57 -a~~~~~~i~---~~~~~~~~~lvGhS~GG~vA~~~A~~~~~~~~~v~~l~~~~~~~~~~~-------~~---~~~~~-- 120 (230)
T d1jmkc_ 57 -LDRYADLIQ---KLQPEGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGV-------SD---LDGRT-- 120 (230)
T ss_dssp -HHHHHHHHH---HHCCSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCC-------C-----------
T ss_pred -HHHHHHHHH---HhCCCCcEEEEeeccChHHHHHHHHhhhhhCccceeeecccccCccch-------hh---hhhhh--
Confidence 334444432 23356889999999999999999998876655554 4443211000 00 00000
Q ss_pred CCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhcc
Q 013006 315 FPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQ 394 (451)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 394 (451)
.... ...+..................+... ...... .........
T Consensus 121 --~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~----------~~~~~~~~~ 165 (230)
T d1jmkc_ 121 --VESD------------------VEALMNVNRDNEALNSEAVKHGLKQK-----THAFYS----------YYVNLISTG 165 (230)
T ss_dssp ----CC------------------HHHHHHHTTTCSGGGSHHHHHHHHHH-----HHHHHH----------HHHHCCCCS
T ss_pred --hhhh------------------hhhhhhccccccccccHHHHHHHHHH-----HHHHHH----------hhhcccccc
Confidence 0000 00111111111111111111100000 000000 012223446
Q ss_pred CCCCCEEEEeeCCCCCCChHHHHHHHHHC-CCCcEEEeCCCCCCccccCh--HHHHhhh
Q 013006 395 MNGVPICLIYGKEDPWVKPVWGLQVKRQV-PEAPYYEISPAGHCPHDEVP--EVCSLCL 450 (451)
Q Consensus 395 ~i~~PvLii~G~~D~~v~~~~~~~l~~~l-p~~~~~~i~~~gH~~~~e~p--~~v~~~I 450 (451)
.+++|+++|+|++|..++..... +.+.. ++.++++++ +||+.++++| +++++.|
T Consensus 166 ~i~~p~l~i~g~~D~~~~~~~~~-w~~~~~~~~~~~~i~-g~H~~ml~~~~~~~va~~I 222 (230)
T d1jmkc_ 166 QVKADIDLLTSGADFDIPEWLAS-WEEATTGAYRMKRGF-GTHAEMLQGETLDRNAGIL 222 (230)
T ss_dssp CBSSEEEEEECSSCCCCCTTEEC-SGGGBSSCEEEEECS-SCGGGTTSHHHHHHHHHHH
T ss_pred cccCcceeeeecCCcccchhHHH-HHHhccCCcEEEEEc-CCChhhcCCccHHHHHHHH
Confidence 78999999999999998865433 34444 456788887 5999999877 8888876
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.78 E-value=3.1e-18 Score=154.65 Aligned_cols=132 Identities=14% Similarity=0.133 Sum_probs=86.5
Q ss_pred CccceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCC
Q 013006 134 ITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEG 212 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~ 212 (451)
|+....+. .|+.+.+...+. +.|+||++||++++...|..+++.|++ ||.|+++|+||||.|.........
T Consensus 3 ~~~~~~~l-~g~~~~~~~p~~---~~~~vl~lHG~~~~~~~~~~~~~~la~~G~~V~~~D~~g~g~s~~~~~~~~~---- 74 (238)
T d1ufoa_ 3 VRTERLTL-AGLSVLARIPEA---PKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKS---- 74 (238)
T ss_dssp EEEEEEEE-TTEEEEEEEESS---CCEEEEEECCTTCCHHHHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTS----
T ss_pred EEEEEEEE-CCEEEEecCCCC---CCeEEEEeCCCCCCHHHHHHHHHHHHHCCCEEEEecCCCCCCCccccccccc----
Confidence 34444443 467776665543 468999999999999999999999865 899999999999998654322110
Q ss_pred CchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHH---HhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEecc
Q 013006 213 DSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIK---EVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNA 289 (451)
Q Consensus 213 ~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~---~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~ 289 (451)
. .+.........+..+++..++. ....+++.++|+|+||.+++.+++.+|+....+.++..
T Consensus 75 ------~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~S~Gg~~a~~~~~~~p~~~~~~~~~~~ 138 (238)
T d1ufoa_ 75 ------P----------RYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGS 138 (238)
T ss_dssp ------T----------THHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCC
T ss_pred ------c----------hhhhhhhhhHHhHHHHHHHHhhhccccCCceEEEEEecccHHHHHHHHhcCcchhheeeeeee
Confidence 0 0000011122233333333333 23457999999999999999999999864444444443
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=99.75 E-value=6.9e-18 Score=155.01 Aligned_cols=217 Identities=14% Similarity=0.125 Sum_probs=136.9
Q ss_pred ccceeeecCCeEEEEeecCCCCC--CCCcEEEecCC--CCChhcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCC
Q 013006 135 TSCFWEWKPKFNVHYEKAGCENV--NSPPVLFLPGF--GVGSFHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRS 209 (451)
Q Consensus 135 ~~~~~~~~~g~~l~y~~~g~~~~--~~p~VlllHG~--~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~ 209 (451)
+.-++...||.+|.....-|.+. +.|+||++||. ......|...+..|+ +||.|+++|+||++.+.....
T Consensus 13 ~~v~~~s~dG~~i~~~l~~p~~~~~~~Pviv~~HGG~~~~~~~~~~~~~~~la~~G~~v~~~d~r~~~~~g~~~~----- 87 (260)
T d2hu7a2 13 RLVWVESFDGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWR----- 87 (260)
T ss_dssp EEEEEECTTSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCCSSCCHHHHHHHHHTCEEEEECCTTCSSSCHHHH-----
T ss_pred EEEEEECCCCCEEEEEEEeCCCCCCCceEEEEECCCCccCCCccccHHHHHHHhhccccccceeeeccccccccc-----
Confidence 34467778999998776555433 34689999984 344556777777774 589999999999987642110
Q ss_pred CCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEecc
Q 013006 210 KEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNA 289 (451)
Q Consensus 210 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~ 289 (451)
.+...+ .....++++.+.+..+.+....+++.++|+|+||.+++.++..+|+.+++++..++
T Consensus 88 -----------~~~~~~-------~~~~~~~D~~~~~~~l~~~~~~~~~~i~g~s~gg~~~~~~~~~~~~~~~a~i~~~~ 149 (260)
T d2hu7a2 88 -----------LKIIGD-------PCGGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGAS 149 (260)
T ss_dssp -----------HTTTTC-------TTTHHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTSSSEEEEESC
T ss_pred -----------cccccc-------cchhhhhhhcccccccccccccceeeccccccccccccchhccCCccccccccccc
Confidence 011100 00123455555555555544557899999999999999999999999999999887
Q ss_pred CCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhH
Q 013006 290 TPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAA 369 (451)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (451)
... . ..+.. ................. .+.+.
T Consensus 150 ~~~---------~-------------------~~~~~------~~~~~~~~~~~~~~~~~----~~~~~----------- 180 (260)
T d2hu7a2 150 VVD---------W-------------------EEMYE------LSDAAFRNFIEQLTGGS----REIMR----------- 180 (260)
T ss_dssp CCC---------H-------------------HHHHH------TCCHHHHHHHHHHHCSC----HHHHH-----------
T ss_pred chh---------h-------------------hhhhc------ccccccccccccccccc----ccccc-----------
Confidence 531 0 00000 01111111111111110 00000
Q ss_pred HHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHC----CCCcEEEeCCCCCCcc
Q 013006 370 AASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQV----PEAPYYEISPAGHCPH 439 (451)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l----p~~~~~~i~~~gH~~~ 439 (451)
.......+.++++|+|+++|++|.++|++.+.++.+.+ ..++++++|++||.+.
T Consensus 181 ----------------~~~~~~~~~~~~~P~liihG~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~ 238 (260)
T d2hu7a2 181 ----------------SRSPINHVDRIKEPLALIHPQNDSRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAIN 238 (260)
T ss_dssp ----------------HTCGGGCGGGCCSCEEEEEETTCSSSCSHHHHHHHHHHHHTTCCEEEEEETTCCSSCC
T ss_pred ----------------ccchhhcccccCCCceeeecccCceecHHHHHHHHHHHHHCCCCeEEEEECcCCCCCC
Confidence 01223335678899999999999999999998887654 3467899999999764
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.75 E-value=3.4e-17 Score=154.68 Aligned_cols=240 Identities=13% Similarity=0.044 Sum_probs=137.8
Q ss_pred ccceeeecCCeEEEEeecCCCC--CCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCC
Q 013006 135 TSCFWEWKPKFNVHYEKAGCEN--VNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEG 212 (451)
Q Consensus 135 ~~~~~~~~~g~~l~y~~~g~~~--~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~ 212 (451)
....+...||.+|+.....|.+ ++.|+||++||++.+...|.......++||.|+++|+||+|.|...........
T Consensus 56 ~~v~~~s~dG~~l~~~l~~P~~~~~~~P~Vv~~hG~~~~~~~~~~~~~~a~~G~~v~~~D~rG~G~s~~~~~~~~~~~-- 133 (322)
T d1vlqa_ 56 YDVTFSGYRGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRGFPHDWLFWPSMGYICFVMDTRGQGSGWLKGDTPDYPE-- 133 (322)
T ss_dssp EEEEEECGGGCEEEEEEEEECCSCSSEEEEEECCCTTCCCCCGGGGCHHHHTTCEEEEECCTTCCCSSSCCCCCBCCS--
T ss_pred EEEEEECCCCcEEEEEEEeccCCCCCccEEEEecCCCCCcCcHHHHHHHHhCCCEEEEeeccccCCCCCCcccccccc--
Confidence 3344556789999987765533 334789999999888777765555557799999999999999965433221110
Q ss_pred CchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhC------CCCEEEEEeCcchHHHHHHHHhCCCccceEEE
Q 013006 213 DSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI------REPVYVVGNSLGGFVAVYFAACNPHLVKGVTL 286 (451)
Q Consensus 213 ~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~------~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl 286 (451)
.....+..+...................|+...++.+. .+++.++|+|+||.+++..+...| ++++++.
T Consensus 134 ----~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~a~~~~~~~~~~d~~ri~~~G~S~GG~~a~~~~~~~~-~~~a~v~ 208 (322)
T d1vlqa_ 134 ----GPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALLC 208 (322)
T ss_dssp ----SSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEEE
T ss_pred ----ccccccccchhhhchhhhhhhhhHHHHHHHHHHHHHHHhcCCcCchhccccccccchHHHHHHHhcCC-CccEEEE
Confidence 00000101000001111111233334445554554442 246999999999999999888876 6888887
Q ss_pred eccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccC
Q 013006 287 LNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQH 366 (451)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (451)
..+... ......... ........ .................. .
T Consensus 209 ~~~~~~--------~~~~~~~~~------------------------~~~~~~~~-~~~~~~~~~~~~~~~~~~-~---- 250 (322)
T d1vlqa_ 209 DVPFLC--------HFRRAVQLV------------------------DTHPYAEI-TNFLKTHRDKEEIVFRTL-S---- 250 (322)
T ss_dssp ESCCSC--------CHHHHHHHC------------------------CCTTHHHH-HHHHHHCTTCHHHHHHHH-H----
T ss_pred eCCccc--------cHHHHHhhc------------------------cccchhhH-HhhhhcCcchhhhHHHHh-h----
Confidence 765321 000000000 00000000 000111111111111000 0
Q ss_pred hhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC-CCcEEEeCCCCCCc
Q 013006 367 PAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP-EAPYYEISPAGHCP 438 (451)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp-~~~~~~i~~~gH~~ 438 (451)
. .+....+.++++|+|+++|++|.++|++.+..+.+.++ .++++++|+++|..
T Consensus 251 ----------------~---~d~~~~a~~i~~P~Lv~~G~~D~~vp~~~~~~~~~~~~~~~~l~~~p~~~H~~ 304 (322)
T d1vlqa_ 251 ----------------Y---FDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYAGPKEIRIYPYNNHEG 304 (322)
T ss_dssp ----------------T---TCHHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCTTT
T ss_pred ----------------h---hhHHHHHhcCCCCEEEEEeCCCCCcCHHHHHHHHHHCCCCeEEEEECCCCCCC
Confidence 0 12333456789999999999999999999999988886 47899999999954
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.71 E-value=2.9e-17 Score=145.76 Aligned_cols=128 Identities=13% Similarity=0.023 Sum_probs=86.4
Q ss_pred eEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccC
Q 013006 145 FNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGF 224 (451)
Q Consensus 145 ~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~ 224 (451)
+.+.|+..++.+++.|+||++||++++...|..+.+.|..++.+++++.+..... ...+|..
T Consensus 9 ~~~~~~~~~~~~~~~p~vv~lHG~g~~~~~~~~l~~~l~~~~~~l~~~~~~~~~~------------------~~~~~~~ 70 (209)
T d3b5ea1 9 LAFPYRLLGAGKESRECLFLLHGSGVDETTLVPLARRIAPTATLVAARGRIPQED------------------GFRWFER 70 (209)
T ss_dssp SSSCEEEESTTSSCCCEEEEECCTTBCTTTTHHHHHHHCTTSEEEEECCSEEETT------------------EEESSCE
T ss_pred CcceeEecCCCCCCCCEEEEEcCCCCCHHHHHHHHHHhccCcEEEeeccCcCccc------------------Ccccccc
Confidence 4556666666666789999999999999999999999998999999875421100 0000000
Q ss_pred CCCCCccccccccCHHHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 225 GDKAQPWASELAYSVDLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 225 ~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
...............+.+.+.|..+.++.++ ++++++|||+||.+++.++.++|+++++++++++.
T Consensus 71 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~id~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~~v~~~g~ 138 (209)
T d3b5ea1 71 IDPTRFEQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPM 138 (209)
T ss_dssp EETTEECHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCC
T ss_pred CCccccchhhHHHHHHHHHHHHHHHHHHhCcccCCEEEEeeCChHHHHHHHHHhCCCcceEEEEeCCc
Confidence 0000000011112233444445555555544 68999999999999999999999999999999874
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.67 E-value=1.2e-16 Score=140.56 Aligned_cols=171 Identities=13% Similarity=0.079 Sum_probs=116.4
Q ss_pred CCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccc
Q 013006 157 VNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELA 236 (451)
Q Consensus 157 ~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 236 (451)
++.|+||++||++++...|..+...|++++.|++++.+..+....... ...........+..
T Consensus 12 ~~~P~vi~lHG~g~~~~~~~~~~~~l~~~~~vv~p~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~ 73 (202)
T d2h1ia1 12 TSKPVLLLLHGTGGNELDLLPLAEIVDSEASVLSVRGNVLENGMPRFF------------------RRLAEGIFDEEDLI 73 (202)
T ss_dssp TTSCEEEEECCTTCCTTTTHHHHHHHHTTSCEEEECCSEEETTEEESS------------------CEEETTEECHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHhccCCceeeecccccCCCCcccc------------------ccCCCCCCchHHHH
Confidence 467999999999999999999999999999999997654333211000 00000000011111
Q ss_pred cCHHHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCCC
Q 013006 237 YSVDLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGT 314 (451)
Q Consensus 237 ~s~~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (451)
.+.+.+.+.+..+.+...+ .++.++|+|+||.+++.++.++|+++.+++++++.....
T Consensus 74 ~~~~~~~~~i~~~~~~~~~d~~~i~~~G~S~Gg~~a~~la~~~~~~~~~~~~~~~~~~~~-------------------- 133 (202)
T d2h1ia1 74 FRTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRR-------------------- 133 (202)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCS--------------------
T ss_pred HHHHHHHHHHHHHHHhccccccceeeecccccchHHHHHHHhccccccceeeecCCCCcc--------------------
Confidence 2233344444444555554 589999999999999999999999999999998742100
Q ss_pred CCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhcc
Q 013006 315 FPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQ 394 (451)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 394 (451)
......
T Consensus 134 --------------------------------------------------------------------------~~~~~~ 139 (202)
T d2h1ia1 134 --------------------------------------------------------------------------GMQLAN 139 (202)
T ss_dssp --------------------------------------------------------------------------SCCCCC
T ss_pred --------------------------------------------------------------------------cccccc
Confidence 000012
Q ss_pred CCCCCEEEEeeCCCCCCChHHHHHHHHHCCC----CcEEEeCCCCCCccc
Q 013006 395 MNGVPICLIYGKEDPWVKPVWGLQVKRQVPE----APYYEISPAGHCPHD 440 (451)
Q Consensus 395 ~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~----~~~~~i~~~gH~~~~ 440 (451)
....|+++++|++|+++|++.++++.+.+.. .+++++|+ ||.+..
T Consensus 140 ~~~~~~~i~~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~g-gH~~~~ 188 (202)
T d2h1ia1 140 LAGKSVFIAAGTNDPICSSAESEELKVLLENANANVTMHWENR-GHQLTM 188 (202)
T ss_dssp CTTCEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEEEEESS-TTSCCH
T ss_pred cccchhhcccccCCCccCHHHHHHHHHHHHHCCCCEEEEEECC-CCcCCH
Confidence 3467999999999999999999888877643 56788875 897643
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=99.67 E-value=9.4e-20 Score=171.46 Aligned_cols=105 Identities=15% Similarity=0.147 Sum_probs=75.2
Q ss_pred cCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHH-------HHHh-hcCCceEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013006 142 KPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEK-------QLKD-LGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGD 213 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~-------~~~~-L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~ 213 (451)
.++..++|....+ ++++||||+||++.++..|.. ++.. +++||+|+++|+||||.|......
T Consensus 43 ~~~~~v~~~~p~~--~~~~PvvllHG~~~~~~~w~~~~~~~~~~~~~~~~~Gy~V~~~D~~G~G~S~~~~~~-------- 112 (318)
T d1qlwa_ 43 VDQMYVRYQIPQR--AKRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISA-------- 112 (318)
T ss_dssp ESCEEEEEEEETT--CCSSCEEEECCTTCCGGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHH--------
T ss_pred eceEEEEEECCCC--CCCCcEEEECCCCCCcCccccCcccchhHHHHHHhCCCEEEEecCCCCCCCCCcccc--------
Confidence 3456666665443 357889999999999999964 3444 477999999999999999653221
Q ss_pred chhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhCCC
Q 013006 214 STEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACNPH 279 (451)
Q Consensus 214 ~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~P~ 279 (451)
++..++.+++..+++.+.. .+..++|||+||.++..++...+.
T Consensus 113 -----------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~g~s~G~~~~~~~~~~~~~ 157 (318)
T d1qlwa_ 113 -----------------------INAVKLGKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFP 157 (318)
T ss_dssp -----------------------HHHHHTTSSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSC
T ss_pred -----------------------CCHHHHHHHHHHHHHHHhhcccccccccccchhHHHHHHhhhcCc
Confidence 4555556666665655543 457788999999998888776543
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.67 E-value=3e-16 Score=143.59 Aligned_cols=101 Identities=20% Similarity=0.167 Sum_probs=85.7
Q ss_pred CCCcEEEecCC--CCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccc
Q 013006 158 NSPPVLFLPGF--GVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASEL 235 (451)
Q Consensus 158 ~~p~VlllHG~--~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 235 (451)
.+|+|+|+||+ +++...|..++..|...+.|+++|+||+|.+++..
T Consensus 41 ~~~~l~c~~~~~~gg~~~~y~~La~~L~~~~~V~al~~pG~~~~e~~~-------------------------------- 88 (255)
T d1mo2a_ 41 GEVTVICCAGTAAISGPHEFTRLAGALRGIAPVRAVPQPGYEEGEPLP-------------------------------- 88 (255)
T ss_dssp CSSEEEEECCCSSSCSGGGGHHHHHHHTTTCCEEEECCTTSSTTCCEE--------------------------------
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHhcCCCceEEEEeCCCcCCCCCCC--------------------------------
Confidence 56899999994 56778999999999988999999999999875432
Q ss_pred ccCHHHHHHHHHHHHH-HhCCCCEEEEEeCcchHHHHHHHHhC---CCccceEEEeccCC
Q 013006 236 AYSVDLWQDQVCYFIK-EVIREPVYVVGNSLGGFVAVYFAACN---PHLVKGVTLLNATP 291 (451)
Q Consensus 236 ~~s~~~~a~dv~~ll~-~l~~~~v~lvGhS~GG~val~~A~~~---P~~v~~lvl~~~~~ 291 (451)
.+++++++++.+.|. .++..+++|+||||||.+|+++|.+. .+.|..++++++.+
T Consensus 89 -~s~~~~a~~~~~~i~~~~~~~P~~L~GhS~Gg~vA~e~A~~l~~~g~~v~~lvlld~~~ 147 (255)
T d1mo2a_ 89 -SSMAAVAAVQADAVIRTQGDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYP 147 (255)
T ss_dssp -SSHHHHHHHHHHHHHHTTSSSCEEEEECSTTHHHHHHHHHHHHHHTCCCSEEEEEECSC
T ss_pred -CCHHHHHHHHHHHHHHhCCCCCEEEEEeCCcHHHHHHHHHhhHhcCCCccEEEEECCCC
Confidence 589999999876664 45678999999999999999999875 45699999999853
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.66 E-value=3.8e-16 Score=137.55 Aligned_cols=179 Identities=14% Similarity=0.066 Sum_probs=122.9
Q ss_pred EEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCC
Q 013006 147 VHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGD 226 (451)
Q Consensus 147 l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~ 226 (451)
|+....|. +..|+||++||++++...|..+.+.|..++.|++++.+..+........ ..
T Consensus 7 ~~~~~~~~--~~~P~vi~lHG~G~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~-----------------~~-- 65 (203)
T d2r8ba1 7 FHKSRAGV--AGAPLFVLLHGTGGDENQFFDFGARLLPQATILSPVGDVSEHGAARFFR-----------------RT-- 65 (203)
T ss_dssp CEEEECCC--TTSCEEEEECCTTCCHHHHHHHHHHHSTTSEEEEECCSEEETTEEESSC-----------------BC--
T ss_pred EeecCCCC--CCCCEEEEECCCCCCHHHHHHHHHHhccCCeEEEecccccccccccccc-----------------cc--
Confidence 34344443 4679999999999999999999999998999999987755443211100 00
Q ss_pred CCCccccccccCH---HHHHHHHHHHH----HHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCC
Q 013006 227 KAQPWASELAYSV---DLWQDQVCYFI----KEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNP 299 (451)
Q Consensus 227 ~~~~~~~~~~~s~---~~~a~dv~~ll----~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~ 299 (451)
.....+. +..++.+..++ ...+.++++++|+|+||.+++.++.++|+.+.+++++++......
T Consensus 66 ------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~~~~~~~~---- 135 (203)
T d2r8ba1 66 ------GEGVYDMVDLERATGKMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP---- 135 (203)
T ss_dssp ------GGGCBCHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC----
T ss_pred ------CccccchhHHHHHHHHHHHHHHHhhhcCCCceEEEEEecCHHHHHHHHHHhhhhcccceeeecccccccc----
Confidence 0001222 23333333333 345778999999999999999999999999999999997521000
Q ss_pred CCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhc
Q 013006 300 IRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFA 379 (451)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (451)
.
T Consensus 136 -------------------------------------------------~------------------------------ 136 (203)
T d2r8ba1 136 -------------------------------------------------K------------------------------ 136 (203)
T ss_dssp -------------------------------------------------C------------------------------
T ss_pred -------------------------------------------------c------------------------------
Confidence 0
Q ss_pred CCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC----CCcEEEeCCCCCCccccChHHHH
Q 013006 380 PQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP----EAPYYEISPAGHCPHDEVPEVCS 447 (451)
Q Consensus 380 ~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp----~~~~~~i~~~gH~~~~e~p~~v~ 447 (451)
........|++++||++|+++|++.++++.+.+. +++++++++ ||.+..+.-+++.
T Consensus 137 -----------~~~~~~~~~~~i~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~~~~g-gH~~~~~~~~~~~ 196 (203)
T d2r8ba1 137 -----------ISPAKPTRRVLITAGERDPICPVQLTKALEESLKAQGGTVETVWHPG-GHEIRSGEIDAVR 196 (203)
T ss_dssp -----------CCCCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEEEEESS-CSSCCHHHHHHHH
T ss_pred -----------cccccccchhhccccCCCCcccHHHHHHHHHHHHHCCCCEEEEEECC-CCcCCHHHHHHHH
Confidence 0001236799999999999999999988877654 357888975 8987654444443
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.66 E-value=2.8e-16 Score=141.32 Aligned_cols=119 Identities=14% Similarity=0.183 Sum_probs=77.4
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELA 236 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 236 (451)
..++|||+||+|++...|..++..|. .++.+++++-|.+..+..... ....+|...........+ .
T Consensus 20 ~~~~VI~lHG~G~~~~~~~~~~~~l~~~~~~~v~p~Ap~~~~~~~~~~------------~~~~w~~~~~~~~~~~~~-~ 86 (229)
T d1fj2a_ 20 ATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNV------------AMPSWFDIIGLSPDSQED-E 86 (229)
T ss_dssp CSEEEEEECCSSSCHHHHHHHHHTTCCTTEEEEECCCCEEEEGGGTTE------------EEECSSCBCCCSTTCCBC-H
T ss_pred CCCEEEEEcCCCCCHHHHHHHHHHhcCCCCEEEeCCCCCCccccCCCc------------ccccccccccccccchhh-h
Confidence 34689999999999999998888874 579999998765432211000 111111111110000000 1
Q ss_pred cCHHHHHHHHHHHHHHh-----CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEecc
Q 013006 237 YSVDLWQDQVCYFIKEV-----IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNA 289 (451)
Q Consensus 237 ~s~~~~a~dv~~ll~~l-----~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~ 289 (451)
..+++.++.+..+++.. ..++++++|+|+||.+++.++.++|+++++++.+++
T Consensus 87 ~~i~~~~~~l~~li~~~~~~~i~~~ri~l~GfS~Gg~~a~~~~~~~~~~~~gvi~~sg 144 (229)
T d1fj2a_ 87 SGIKQAAENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSC 144 (229)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESC
T ss_pred HHHHHHHHHHHHHhhhhhhcCCCccceeeeecccchHHHHHHHHhhccccCccccccc
Confidence 12444455555555543 346899999999999999999999999999999986
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=99.63 E-value=3.7e-16 Score=147.73 Aligned_cols=100 Identities=20% Similarity=0.251 Sum_probs=88.2
Q ss_pred CCCcEEEecCCCCChhc------HHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCc
Q 013006 158 NSPPVLFLPGFGVGSFH------YEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQP 230 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~------~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 230 (451)
.+.||||+||++++... |..+.+.|.+ ||+|+++|+||+|.|+.+.
T Consensus 7 ~k~PvvlvHG~~g~~~~~~~~~~~~~~~~~L~~~G~~V~~~~~~g~g~s~~~~--------------------------- 59 (319)
T d1cvla_ 7 TRYPVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPN--------------------------- 59 (319)
T ss_dssp CSSCEEEECCTTBSSEETTTEESSTTHHHHHHHTTCCEEECCCBCSSCTTSTT---------------------------
T ss_pred CCCCEEEECCCCCCcchhhhhhhHHHHHHHHHHCCCEEEEecCCCCCCCCCCc---------------------------
Confidence 45689999999877653 7888899965 6999999999999886432
Q ss_pred cccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 231 WASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 231 ~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
...+++++++..+++.++.+++++|||||||.++..++.++|++|+++|+++++
T Consensus 60 ------~~~~~l~~~i~~~~~~~~~~~v~lvGhS~GG~~~~~~~~~~p~~v~~vv~i~~p 113 (319)
T d1cvla_ 60 ------GRGEQLLAYVKQVLAATGATKVNLIGHSQGGLTSRYVAAVAPQLVASVTTIGTP 113 (319)
T ss_dssp ------SHHHHHHHHHHHHHHHHCCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred ------ccHHHHHHHHHHHHHHhCCCCEEEEeccccHHHHHHHHHHCccccceEEEECCC
Confidence 467889999999999999999999999999999999999999999999999874
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.62 E-value=1.8e-15 Score=138.75 Aligned_cols=170 Identities=15% Similarity=0.085 Sum_probs=117.6
Q ss_pred eEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhcccc
Q 013006 145 FNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWG 223 (451)
Q Consensus 145 ~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~ 223 (451)
.+|+|=... .+..-|.|||+||++++...+..+...|++ ||.|+++|++|++....
T Consensus 39 ~~ly~P~~~-~~g~~P~Vv~~HG~~g~~~~~~~~a~~lA~~Gy~V~~~d~~~~~~~~~---------------------- 95 (260)
T d1jfra_ 39 GTIYYPTST-ADGTFGAVVISPGFTAYQSSIAWLGPRLASQGFVVFTIDTNTTLDQPD---------------------- 95 (260)
T ss_dssp EEEEEESCC-TTCCEEEEEEECCTTCCGGGTTTHHHHHHTTTCEEEEECCSSTTCCHH----------------------
T ss_pred EEEEEcCCC-CCCCccEEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeeCCCcCCch----------------------
Confidence 456663321 122347899999999999999999999965 79999999998765420
Q ss_pred CCCCCCccccccccCHHHHHHHHHHHHHH------hCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCC
Q 013006 224 FGDKAQPWASELAYSVDLWQDQVCYFIKE------VIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSP 297 (451)
Q Consensus 224 ~~~~~~~~~~~~~~s~~~~a~dv~~ll~~------l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~ 297 (451)
....++.+.+..+.+. +..+++.++|||+||.+++.++...| +++++|.+.+...
T Consensus 96 -------------~~~~d~~~~~~~l~~~~~~~~~vD~~rI~v~G~S~GG~~al~aa~~~~-~~~A~v~~~~~~~----- 156 (260)
T d1jfra_ 96 -------------SRGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRT-SLKAAIPLTGWNT----- 156 (260)
T ss_dssp -------------HHHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCCCS-----
T ss_pred -------------hhHHHHHHHHHHHHhhhhhhccccccceEEEeccccchHHHHHHhhhc-cchhheeeecccc-----
Confidence 1122333333333332 23467999999999999999999887 6888888776310
Q ss_pred CCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHH
Q 013006 298 NPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIM 377 (451)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (451)
T Consensus 157 -------------------------------------------------------------------------------- 156 (260)
T d1jfra_ 157 -------------------------------------------------------------------------------- 156 (260)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHH-HHHHHHHCCC---CcEEEeCCCCCCccccChHHHHh
Q 013006 378 FAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVW-GLQVKRQVPE---APYYEISPAGHCPHDEVPEVCSL 448 (451)
Q Consensus 378 ~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~-~~~l~~~lp~---~~~~~i~~~gH~~~~e~p~~v~~ 448 (451)
...+.++++|+|+++|++|.++|++. .+.+.+.++. .+++++++++|+.....-..+.+
T Consensus 157 ------------~~~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~i~ga~H~~~~~~~~~~~~ 219 (260)
T d1jfra_ 157 ------------DKTWPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSLDKAYLELRGASHFTPNTSDTTIAK 219 (260)
T ss_dssp ------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSCEEEEEETTCCTTGGGSCCHHHHH
T ss_pred ------------cccccccccceeEEecCCCCCCCHHHHHHHHHHhcccCCCEEEEEECCCccCCCCCChHHHHH
Confidence 00013468999999999999999864 5556666653 35888999999876554444433
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.61 E-value=2.6e-15 Score=135.27 Aligned_cols=193 Identities=15% Similarity=0.070 Sum_probs=128.9
Q ss_pred eeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhh
Q 013006 139 WEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEE 217 (451)
Q Consensus 139 ~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~ 217 (451)
++..||.+++....-|.+.+.|.||++|+..+........++.|+ .||.|+++|+.|.+......... +
T Consensus 8 ~~~~dg~~~~a~~~~P~~~~~P~vl~~h~~~G~~~~~~~~a~~lA~~Gy~vl~pd~~~~~~~~~~~~~~----------~ 77 (233)
T d1dina_ 8 IQSYDGHTFGALVGSPAKAPAPVIVIAQEIFGVNAFMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQ----------D 77 (233)
T ss_dssp EECTTSCEECEEEECCSSSSEEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTT----------S
T ss_pred EEcCCCCEEEEEEECCCCCCceEEEEeCCCCCCCHHHHHHHHHHHhcCCcceeeeeccCCCcCcccChH----------H
Confidence 556788888888887766677999999976665555667777885 58999999998766553221111 0
Q ss_pred hhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCC-----CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCC
Q 013006 218 KNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR-----EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPF 292 (451)
Q Consensus 218 ~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~-----~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~ 292 (451)
....+.. .......+.+....|+...++.+.. +++.++|+|+||.+++.++... .+.+.+.+.+.+.
T Consensus 78 ~~~~~~~------~~~~~~~~~~~~~~d~~aa~~~l~~~~~~~~~i~~~G~s~Gg~~a~~~a~~~--~~~~~~~~~~~~~ 149 (233)
T d1dina_ 78 ERQREQA------YKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYCLGGALAFLVAAKG--YVDRAVGYYGVGL 149 (233)
T ss_dssp HHHHHHH------HHHHHTCCHHHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHHHT--CSSEEEEESCSCG
T ss_pred HHHHHHH------HHHhhhhhhHHHHHHHHHHHHHHHhCCCCCCceEEEEecccccceeeccccc--ccceecccccccc
Confidence 0000000 0011124666677788877776622 4799999999999999988764 3555554433210
Q ss_pred CCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHH
Q 013006 293 WGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAAS 372 (451)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (451)
T Consensus 150 -------------------------------------------------------------------------------- 149 (233)
T d1dina_ 150 -------------------------------------------------------------------------------- 149 (233)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHC---CCCcEEEeCCCCCCccccCh
Q 013006 373 FASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQV---PEAPYYEISPAGHCPHDEVP 443 (451)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l---p~~~~~~i~~~gH~~~~e~p 443 (451)
....+.+.++++|+|+++|++|+++|++..+.+.+.+ ++++++++||++|.+..+..
T Consensus 150 --------------~~~~~~~~~i~~Pvl~~~G~~D~~vp~e~~~~~~~~~~~~~~~~~~~y~ga~HgF~~~~~ 209 (233)
T d1dina_ 150 --------------EKQLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFARTSS 209 (233)
T ss_dssp --------------GGGGGGGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCTTEEEEEETTCCTTTTCTTS
T ss_pred --------------ccchhhhhccCCcceeeecccccCCCHHHHHHHHHHHhcCCCEEEEEECCCCcCCCCCCC
Confidence 0111223457899999999999999999887776543 34678999999998765443
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.61 E-value=5.4e-15 Score=135.12 Aligned_cols=98 Identities=10% Similarity=0.067 Sum_probs=70.6
Q ss_pred EEEeecCCCCCCCCcEEEecCCC-----CChhcHHHHH----Hhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchh
Q 013006 147 VHYEKAGCENVNSPPVLFLPGFG-----VGSFHYEKQL----KDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTE 216 (451)
Q Consensus 147 l~y~~~g~~~~~~p~VlllHG~~-----~~~~~~~~~~----~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~ 216 (451)
+.|...+. .++|+||++||.+ .+...|..+. ..+ ..++.|+.+|+|..+....+
T Consensus 21 ~~~~~~~~--~~~~~vv~iHGGg~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~dYrl~p~~~~~-------------- 84 (263)
T d1vkha_ 21 LTFQEISQ--NTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEITNP-------------- 84 (263)
T ss_dssp EEEECCCT--TCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSCTT--------------
T ss_pred EEeccCCC--CCCcEEEEECCCCccCCCCCcchHHHHHHHHHHHHHhCCeEEEEeccccCcchhhh--------------
Confidence 44444443 2578999999953 2334454443 333 45899999999975543211
Q ss_pred hhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCc
Q 013006 217 EKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHL 280 (451)
Q Consensus 217 ~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~ 280 (451)
..+++..+.+..+++....++++|+|||+||.+++.++...++.
T Consensus 85 --------------------~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~lal~~a~~~~~~ 128 (263)
T d1vkha_ 85 --------------------RNLYDAVSNITRLVKEKGLTNINMVGHSVGATFIWQILAALKDP 128 (263)
T ss_dssp --------------------HHHHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHTGGGSC
T ss_pred --------------------HHHHhhhhhhhcccccccccceeeeccCcHHHHHHHHHHhccCc
Confidence 46778888888888888999999999999999999999876653
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.59 E-value=7.5e-14 Score=124.18 Aligned_cols=186 Identities=11% Similarity=0.040 Sum_probs=122.8
Q ss_pred eeecCCeEEEEeecCCCCCCCCcEEEecCC---CCChhc--HHHHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCC
Q 013006 139 WEWKPKFNVHYEKAGCENVNSPPVLFLPGF---GVGSFH--YEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEG 212 (451)
Q Consensus 139 ~~~~~g~~l~y~~~g~~~~~~p~VlllHG~---~~~~~~--~~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~ 212 (451)
+.-++| +|.....-+..+.++++|++||. +++... ...++..| ..|+.++.+|+||.|.|....+..
T Consensus 5 i~g~~G-~Le~~~~~~~~~~~~~~l~~Hp~p~~GG~~~~~~~~~~a~~l~~~G~~~lrfn~RG~g~S~G~~~~~------ 77 (218)
T d2i3da1 5 FNGPAG-RLEGRYQPSKEKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEFDHG------ 77 (218)
T ss_dssp EEETTE-EEEEEEECCSSTTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCCSS------
T ss_pred EeCCCc-cEEEEEeCCCCCCCCEEEEECCCcCcCCcCCcHHHHHHHHHHHhcCeeEEEEecCccCCCccccccc------
Confidence 444555 66665554444456899999984 444322 44566666 458999999999999997443210
Q ss_pred CchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh-CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 213 DSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV-IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 213 ~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l-~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
....++....+..+.+.. ...+++++|+|+||.+++.++.+.+ .+.+++++.+..
T Consensus 78 -----------------------~~e~~d~~aa~~~~~~~~~~~~~~~~~g~S~G~~~a~~~a~~~~-~~~~~~~~~~~~ 133 (218)
T d2i3da1 78 -----------------------AGELSDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRP-EIEGFMSIAPQP 133 (218)
T ss_dssp -----------------------HHHHHHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCCT
T ss_pred -----------------------hhHHHHHHHHHhhhhcccccccceeEEeeehHHHHHHHHHHhhc-cccceeeccccc
Confidence 012233333333322232 2367999999999999999998876 577788877642
Q ss_pred CCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHH
Q 013006 292 FWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAA 371 (451)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (451)
..
T Consensus 134 ~~------------------------------------------------------------------------------ 135 (218)
T d2i3da1 134 NT------------------------------------------------------------------------------ 135 (218)
T ss_dssp TT------------------------------------------------------------------------------
T ss_pred cc------------------------------------------------------------------------------
Confidence 10
Q ss_pred HHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC-----CCcEEEeCCCCCCccccChHHH
Q 013006 372 SFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP-----EAPYYEISPAGHCPHDEVPEVC 446 (451)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp-----~~~~~~i~~~gH~~~~e~p~~v 446 (451)
.....+....+|+|+++|++|.+++......+.+.+. ..++.+++|++|+++ .+-+++
T Consensus 136 ----------------~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~l~~~~~~~~~~~~~~~vi~gAdHfF~-g~~~~l 198 (218)
T d2i3da1 136 ----------------YDFSFLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFN-GKVDEL 198 (218)
T ss_dssp ----------------SCCTTCTTCCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCT-TCHHHH
T ss_pred ----------------cchhhccccCCCceeeecccceecChHHHHHHHHHHhhccCCCccEEEeCCCCCCCc-CCHHHH
Confidence 0001123357899999999999999988887766543 347889999999876 555666
Q ss_pred Hhhh
Q 013006 447 SLCL 450 (451)
Q Consensus 447 ~~~I 450 (451)
.+.+
T Consensus 199 ~~~v 202 (218)
T d2i3da1 199 MGEC 202 (218)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.57 E-value=1.6e-15 Score=140.55 Aligned_cols=97 Identities=19% Similarity=0.163 Sum_probs=86.0
Q ss_pred CCCcEEEecCCCCChhc-----HHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcc
Q 013006 158 NSPPVLFLPGFGVGSFH-----YEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPW 231 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~-----~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 231 (451)
++-||||+||++++... |..+.+.|.+ ||+|+++|++|+|.+.
T Consensus 6 ~~~PvvlvHG~~g~~~~~~~~yw~~i~~~L~~~G~~v~~~~~~~~~~~~------------------------------- 54 (285)
T d1ex9a_ 6 TKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSE------------------------------- 54 (285)
T ss_dssp CSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHH-------------------------------
T ss_pred CCCCEEEECCCCCCccccchhhHHHHHHHHHhCCCEEEEeCCCCCCCcH-------------------------------
Confidence 45679999999876543 7888899855 7999999999998663
Q ss_pred ccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 232 ASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 232 ~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
+..++++++|.+++++++.+++++|||||||.++..++..+|++|+++|.++++
T Consensus 55 -----~~a~~l~~~i~~~~~~~g~~~v~ligHS~GG~~~r~~~~~~p~~v~~lv~i~tP 108 (285)
T d1ex9a_ 55 -----VRGEQLLQQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAP 108 (285)
T ss_dssp -----HHHHHHHHHHHHHHHHHCCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred -----HHHHHHHHHHHHHHHHcCCCeEEEEEECccHHHHHHHHHHCCccceeEEEECCC
Confidence 577889999999999999999999999999999999999999999999999874
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.57 E-value=1e-14 Score=133.13 Aligned_cols=131 Identities=14% Similarity=0.025 Sum_probs=80.4
Q ss_pred ceeeecCCeEEEEeecCCCC--C--CCCcEEEecCCCCC-----hhcHHHHHHhh-cCCceEEEEcCCCCCCCCCCCCCC
Q 013006 137 CFWEWKPKFNVHYEKAGCEN--V--NSPPVLFLPGFGVG-----SFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPT 206 (451)
Q Consensus 137 ~~~~~~~g~~l~y~~~g~~~--~--~~p~VlllHG~~~~-----~~~~~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~ 206 (451)
..+...||.+++|...-|++ + +-|.||++||.+.. ...+......+ .++|.|+.+|+||.+.+...-..
T Consensus 6 ~~~~~~~~~~~~~~l~lP~~~~~~kk~P~iv~~HGGp~~~~~~~~~~~~~~~~~~a~~g~~V~~~d~rg~~~~~~~~~~- 84 (258)
T d2bgra2 6 LDFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMH- 84 (258)
T ss_dssp EEEEEETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCHHHHG-
T ss_pred EEEEEeCCcEEEEEEEECCCcCCCCCeeEEEEEcCCCCcccCCCccCcCHHHHHHhcCCcEEEeecccccCCcchHHHH-
Confidence 34566799999999876643 2 23789999994222 22222333345 45899999999998755311000
Q ss_pred CCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhCCCccceE
Q 013006 207 PRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACNPHLVKGV 284 (451)
Q Consensus 207 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~P~~v~~l 284 (451)
..+..|+. ...++..+.+..+.+...+ +++.++|+|+||.+++.++..+|+.+...
T Consensus 85 ----------~~~~~~~~------------~~~~~~~~~~~~~~~~~~id~~~i~i~G~S~GG~~~~~~~~~~~~~~~~~ 142 (258)
T d2bgra2 85 ----------AINRRLGT------------FEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCG 142 (258)
T ss_dssp ----------GGTTCTTS------------HHHHHHHHHHHHHTTSSSEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEE
T ss_pred ----------hhhhhhhh------------HHHHHHHHHHHHhhhhcccccccccccCcchhhcccccccccCCCcceEE
Confidence 00011111 1223322233333322222 46999999999999999999999988888
Q ss_pred EEeccC
Q 013006 285 TLLNAT 290 (451)
Q Consensus 285 vl~~~~ 290 (451)
+.....
T Consensus 143 ~~~~~~ 148 (258)
T d2bgra2 143 IAVAPV 148 (258)
T ss_dssp EEESCC
T ss_pred EEeecc
Confidence 877764
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=99.56 E-value=2.8e-15 Score=139.88 Aligned_cols=99 Identities=16% Similarity=0.138 Sum_probs=83.9
Q ss_pred CCCcEEEecCCCCChhc--HHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccc
Q 013006 158 NSPPVLFLPGFGVGSFH--YEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASE 234 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~--~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 234 (451)
..+||||+||++.+... |..+.+.|.+ +|+|+.+|+||+|.++.
T Consensus 30 ~~~PVvlvHG~~~~~~~~~~~~~~~~L~~~Gy~v~~~d~~g~g~~d~--------------------------------- 76 (317)
T d1tcaa_ 30 VSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDT--------------------------------- 76 (317)
T ss_dssp CSSEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCSCH---------------------------------
T ss_pred CCCcEEEECCCCCCCcchhHHHHHHHHHhCCCeEEEecCCCCCCCch---------------------------------
Confidence 45789999999887655 5668888854 79999999999998742
Q ss_pred cccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCC---CccceEEEeccC
Q 013006 235 LAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNP---HLVKGVTLLNAT 290 (451)
Q Consensus 235 ~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P---~~v~~lvl~~~~ 290 (451)
..+.+++++.|..+++..+.++++||||||||.++..++..+| ++|+.+|.+++.
T Consensus 77 -~~sae~la~~i~~v~~~~g~~kV~lVGhS~GG~~a~~~l~~~p~~~~~V~~~v~i~~~ 134 (317)
T d1tcaa_ 77 -QVNTEYMVNAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPD 134 (317)
T ss_dssp -HHHHHHHHHHHHHHHHHTTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCC
T ss_pred -HhHHHHHHHHHHHHHHhccCCceEEEEeCchHHHHHHHHHHCCCcchheeEEEEeCCC
Confidence 1467788888888889889999999999999999999999998 479999999974
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.43 E-value=2.2e-13 Score=124.18 Aligned_cols=126 Identities=14% Similarity=0.100 Sum_probs=73.9
Q ss_pred cCCeEEEEeecCCCC----CCCCcEEEecCCCCC---hhcH--HHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCC
Q 013006 142 KPKFNVHYEKAGCEN----VNSPPVLFLPGFGVG---SFHY--EKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKE 211 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~----~~~p~VlllHG~~~~---~~~~--~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~ 211 (451)
.||.+|+....-|.+ ++-|+||++||.+.+ ...| ......|+ +||.|+++|+||.+.+.......
T Consensus 10 ~dg~~l~~~l~~P~~~~~~~k~Pviv~~HGGp~~~~~~~~~~~~~~~~~la~~G~~vv~~d~rGs~~~g~~~~~~----- 84 (258)
T d1xfda2 10 IDDYNLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHE----- 84 (258)
T ss_dssp ETTEEECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHHHHT-----
T ss_pred eCCeEEEEEEEECCCcCCCCceeEEEEEcCCccccCcCCCcCcchHHHHHhcCCcEEEEeccccccccchhHhhh-----
Confidence 589999887665543 123789999995322 1223 22334564 48999999999865432100000
Q ss_pred CCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhC--CCCEEEEEeCcchHHHHHHHHhCCC----ccceEE
Q 013006 212 GDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI--REPVYVVGNSLGGFVAVYFAACNPH----LVKGVT 285 (451)
Q Consensus 212 ~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~--~~~v~lvGhS~GG~val~~A~~~P~----~v~~lv 285 (451)
....| .....++..+.+..++++.. .+++.++|+|+||.+++.++...++ .++..+
T Consensus 85 ------~~~~~------------g~~~~~d~~~~i~~l~~~~~id~~ri~v~G~S~GG~~a~~~~~~~~~~~~~~~~~~~ 146 (258)
T d1xfda2 85 ------VRRRL------------GLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGS 146 (258)
T ss_dssp ------TTTCT------------TTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEE
T ss_pred ------hhccc------------hhHHHHHHHHhhhhhcccccccccceeccccCchHHHHHHHHhcCCcccceeeeeee
Confidence 00000 00234445555555544433 3679999999999999988877654 456666
Q ss_pred EeccC
Q 013006 286 LLNAT 290 (451)
Q Consensus 286 l~~~~ 290 (451)
.+++.
T Consensus 147 ~~~~~ 151 (258)
T d1xfda2 147 ALSPI 151 (258)
T ss_dssp EESCC
T ss_pred ccccc
Confidence 66553
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=99.42 E-value=4e-13 Score=122.66 Aligned_cols=174 Identities=10% Similarity=0.048 Sum_probs=110.1
Q ss_pred CCCCcEEEecCC---CCChhcHHHHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccc
Q 013006 157 VNSPPVLFLPGF---GVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWA 232 (451)
Q Consensus 157 ~~~p~VlllHG~---~~~~~~~~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 232 (451)
+..|+|||+||. .++...|..+...| .+||.|+.+|+|..+..
T Consensus 60 ~~~P~vv~iHGG~w~~g~~~~~~~~a~~l~~~G~~Vv~~~YRl~p~~--------------------------------- 106 (261)
T d2pbla1 60 TPVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPEV--------------------------------- 106 (261)
T ss_dssp SCSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTTS---------------------------------
T ss_pred CCCCeEEEECCCCCccCChhHhhhHHHHHhcCCceeecccccccccc---------------------------------
Confidence 457999999995 34556676677777 45899999999965432
Q ss_pred cccccCHHHHHHHHHHHHHHh---CCCCEEEEEeCcchHHHHHHHHhCC------CccceEEEeccCCCCCCCCCCCCch
Q 013006 233 SELAYSVDLWQDQVCYFIKEV---IREPVYVVGNSLGGFVAVYFAACNP------HLVKGVTLLNATPFWGFSPNPIRSP 303 (451)
Q Consensus 233 ~~~~~s~~~~a~dv~~ll~~l---~~~~v~lvGhS~GG~val~~A~~~P------~~v~~lvl~~~~~~~~~~~~~~~~~ 303 (451)
++.+..+|+.+.++.+ ...+++|+|||.||.++..++.... ..+++++.+++.....
T Consensus 107 -----~~p~~~~d~~~a~~~~~~~~~~rI~l~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 172 (261)
T d2pbla1 107 -----RISEITQQISQAVTAAAKEIDGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLR--------- 172 (261)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHSCSCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCG---------
T ss_pred -----cCchhHHHHHHHHHHHHhcccCceEEEEcchHHHHHHHHhcCcccccchhhchhhhhccccccccc---------
Confidence 3444445544444433 2478999999999999987765432 3578888888642100
Q ss_pred HHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCC
Q 013006 304 KLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGN 383 (451)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (451)
.... ......+.. . .+....
T Consensus 173 ~~~~--------------------------------~~~~~~~~~---~-~~~~~~------------------------ 192 (261)
T d2pbla1 173 PLLR--------------------------------TSMNEKFKM---D-ADAAIA------------------------ 192 (261)
T ss_dssp GGGG--------------------------------STTHHHHCC---C-HHHHHH------------------------
T ss_pred hhhh--------------------------------hhhcccccC---C-HHHHHH------------------------
Confidence 0000 000000000 0 000000
Q ss_pred CchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCcccc
Q 013006 384 LSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDE 441 (451)
Q Consensus 384 ~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e 441 (451)
...+....+...|+++++|++|..++...++++.+.+ +++.+++++.+||-.++
T Consensus 193 ---~SP~~~~~~~~~P~li~~G~~D~~~~~~qs~~~~~~l-~~~~~~~~~~~HF~vi~ 246 (261)
T d2pbla1 193 ---ESPVEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAW-DADHVIAFEKHHFNVIE 246 (261)
T ss_dssp ---TCGGGCCCCCSCEEEEEEETTSCHHHHHHHHHHHHHH-TCEEEEETTCCTTTTTG
T ss_pred ---hCchhhcccCCCeEEEEEecCCCchHHHHHHHHHHHh-CCCceEeCCCCchhHHH
Confidence 0111223456899999999999888888888888887 46788999999976543
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.42 E-value=3.2e-13 Score=119.92 Aligned_cols=120 Identities=17% Similarity=0.160 Sum_probs=68.9
Q ss_pred CCCCcEEEecCCCCChhcHHHHHHhhcC---CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccc
Q 013006 157 VNSPPVLFLPGFGVGSFHYEKQLKDLGK---DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWAS 233 (451)
Q Consensus 157 ~~~p~VlllHG~~~~~~~~~~~~~~L~~---~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 233 (451)
+..++|||+||++++...|..+++.|.+ ...+++++-|.......... ....+|...... +...
T Consensus 12 ~~~~~Vi~lHG~G~~~~~~~~~~~~l~~~~~~~~~i~p~ap~~~~~~~~~~------------~~~~w~~~~~~~-~~~~ 78 (218)
T d1auoa_ 12 PADACVIWLHGLGADRYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGY------------EMPSWYDIKAMS-PARS 78 (218)
T ss_dssp CCSEEEEEECCTTCCTTTTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTE------------EEECSSCEEECS-SSCE
T ss_pred CCCeEEEEEcCCCCChhhHHHHHHHHHHhCCCcEEEccCCCccccccCCCc------------ccCccccccccc-cccc
Confidence 3567899999999999999999888865 35667666542111000000 001111110000 0000
Q ss_pred ccccCHHHHHHHHHHHHHH---hC--CCCEEEEEeCcchHHHHHHHHh-CCCccceEEEecc
Q 013006 234 ELAYSVDLWQDQVCYFIKE---VI--REPVYVVGNSLGGFVAVYFAAC-NPHLVKGVTLLNA 289 (451)
Q Consensus 234 ~~~~s~~~~a~dv~~ll~~---l~--~~~v~lvGhS~GG~val~~A~~-~P~~v~~lvl~~~ 289 (451)
.....++...+.+..+++. .+ .++++++|+|+||++++.++.. .+..+++++.+++
T Consensus 79 ~~~~~~~~~~~~v~~li~~~~~~~i~~~ri~l~GfSqGg~~a~~~~l~~~~~~~~~~v~~~g 140 (218)
T d1auoa_ 79 ISLEELEVSAKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALST 140 (218)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESC
T ss_pred chHHHHHHHHHHHHHHHHHHHHhCCCCcceEEeeeCcchHHHHHHHHhcccccceeeeeccc
Confidence 0001223333334444433 23 3789999999999999998865 4668999999886
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=99.39 E-value=1.6e-12 Score=123.72 Aligned_cols=126 Identities=13% Similarity=0.039 Sum_probs=91.9
Q ss_pred cceeeecCCeEEEEeecCCCCCC-CCcEEEecCCCCC-hhcH---HHHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCC
Q 013006 136 SCFWEWKPKFNVHYEKAGCENVN-SPPVLFLPGFGVG-SFHY---EKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRS 209 (451)
Q Consensus 136 ~~~~~~~~g~~l~y~~~g~~~~~-~p~VlllHG~~~~-~~~~---~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~ 209 (451)
...++.+||++|....+-|.... -|+||+.||++.. ...+ ......| .+||.|+++|.||+|.|+......
T Consensus 7 ~v~ipmrDGv~L~~~vy~P~~~~~~P~il~~~pyg~~~~~~~~~~~~~~~~~a~~GY~vv~~d~RG~g~S~G~~~~~--- 83 (347)
T d1ju3a2 7 NVMVPMRDGVRLAVDLYRPDADGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEFVPH--- 83 (347)
T ss_dssp EEEEECTTSCEEEEEEEEECCSSCEEEEEEEESSCTTCCHHHHTTSCCTHHHHHTTCEEEEEECTTSTTCCSCCCTT---
T ss_pred CeEEECCCCCEEEEEEEEcCCCCCEEEEEEEcCCCCccccCcCcccHHHHHHHHCCCEEEEEeeCCccccCCccccc---
Confidence 45677889999999888775432 3788888998653 2222 2223344 568999999999999997543221
Q ss_pred CCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhCCCccceEEEe
Q 013006 210 KEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLL 287 (451)
Q Consensus 210 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~ 287 (451)
...+.-+.|+.+++..... .+|.++|+|+||.+++.+|+..|..+++++..
T Consensus 84 ---------------------------~~~~~d~~d~i~w~~~q~~~~grVg~~G~SygG~~~~~~A~~~~~~l~aiv~~ 136 (347)
T d1ju3a2 84 ---------------------------VDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPS 136 (347)
T ss_dssp ---------------------------TTHHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEE
T ss_pred ---------------------------cchhhhHHHHHHHHHhhccCCcceEeeeccccccchhhhhhcccccceeeeec
Confidence 2333444566666666644 58999999999999999999999899999998
Q ss_pred ccCC
Q 013006 288 NATP 291 (451)
Q Consensus 288 ~~~~ 291 (451)
.+..
T Consensus 137 ~~~~ 140 (347)
T d1ju3a2 137 MASA 140 (347)
T ss_dssp SCCS
T ss_pred cccc
Confidence 8764
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=99.17 E-value=4.3e-10 Score=108.97 Aligned_cols=80 Identities=11% Similarity=-0.042 Sum_probs=63.0
Q ss_pred Hhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCC---
Q 013006 180 KDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR--- 255 (451)
Q Consensus 180 ~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~--- 255 (451)
..| .+||.|+.+|.||.|.|+..... .+.++ ++|..++++-+..
T Consensus 130 ~~~~~~GYavv~~D~RG~g~S~G~~~~-------------------------------~~~~e-~~D~~~~IeWl~~~~~ 177 (405)
T d1lnsa3 130 DYFLTRGFASIYVAGVGTRSSDGFQTS-------------------------------GDYQQ-IYSMTAVIDWLNGRAR 177 (405)
T ss_dssp HHHHTTTCEEEEECCTTSTTSCSCCCT-------------------------------TSHHH-HHHHHHHHHHHTTSSC
T ss_pred HHHHhCCCEEEEECCCCCCCCCCcccc-------------------------------CChhh-hhhHHHHHHHHHhccc
Confidence 344 56899999999999999754321 34443 5677777777642
Q ss_pred -----------------CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 256 -----------------EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 256 -----------------~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
.+|.++|+|+||++.+.+|+..|..++++|...+..
T Consensus 178 ~~~~~~~~~~~~q~WsnGkVGm~G~SY~G~~q~~aA~~~pp~LkAivp~~~~~ 230 (405)
T d1lnsa3 178 AYTSRKKTHEIKASWANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGIS 230 (405)
T ss_dssp EESSTTCCCEECCTTEEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCS
T ss_pred ccccccccccccccccCCeeEEEecCHHHHHHHHHHhcCCccceEEEecCccc
Confidence 269999999999999999999999999999988764
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=99.16 E-value=1.1e-10 Score=112.37 Aligned_cols=139 Identities=15% Similarity=0.024 Sum_probs=88.6
Q ss_pred ccceeeecCCeEEEEeecCCCCCC-CCcEEEecCCCCChh-------cHH----HHHHhh-cCCceEEEEcCCCCCCCCC
Q 013006 135 TSCFWEWKPKFNVHYEKAGCENVN-SPPVLFLPGFGVGSF-------HYE----KQLKDL-GKDYRAWAIDFLGQGMSLP 201 (451)
Q Consensus 135 ~~~~~~~~~g~~l~y~~~g~~~~~-~p~VlllHG~~~~~~-------~~~----~~~~~L-~~~~~Vi~~D~rG~G~S~~ 201 (451)
+...++.+||++|....+-|.+.. -|+||+.|+++.+.. .+. ...+.| .+||.|+.+|.||+|.|+.
T Consensus 25 ~~v~i~~rDG~~L~~~v~~P~~~~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~S~G 104 (381)
T d1mpxa2 25 REVMIPMRDGVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEG 104 (381)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCS
T ss_pred EEEEEECCCCCEEEEEEEEeCCCCCccEEEEEccCCCCCcccccccccccccchhHHHHHHhCCCEEEEEecCccCCCCC
Confidence 456788899999998777664433 478888898764321 111 223445 5689999999999999975
Q ss_pred CCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhCCC
Q 013006 202 DEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACNPH 279 (451)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~P~ 279 (451)
.-....... .....+ ......+..+.+.-+.++..+ .+|.++|+|+||++++.+|...|.
T Consensus 105 ~~~~~~~~~------~~~~~~------------~~~~~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~~~~ 166 (381)
T d1mpxa2 105 DYVMTRPLR------GPLNPS------------EVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHP 166 (381)
T ss_dssp CCCTTCCCS------BTTBCS------------SCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCT
T ss_pred ceeccchhh------hhcccc------------hhHHHHHHHHHHHHHhhcCCcCccceeeecccHHHHHHHHHHhcccc
Confidence 322110000 000000 001234444333333333223 589999999999999999999999
Q ss_pred ccceEEEeccCC
Q 013006 280 LVKGVTLLNATP 291 (451)
Q Consensus 280 ~v~~lvl~~~~~ 291 (451)
.++++|...+..
T Consensus 167 ~l~a~v~~~~~~ 178 (381)
T d1mpxa2 167 ALKVAVPESPMI 178 (381)
T ss_dssp TEEEEEEESCCC
T ss_pred ccceeeeecccc
Confidence 999999988754
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=99.13 E-value=2.7e-10 Score=102.92 Aligned_cols=122 Identities=12% Similarity=0.039 Sum_probs=73.5
Q ss_pred ecCCeEEEEeecCCC----CCCCCcEEEecCCCCChhcHHH-------HHHhh-cC-CceEEEEcCCCCCCCCCCCCCCC
Q 013006 141 WKPKFNVHYEKAGCE----NVNSPPVLFLPGFGVGSFHYEK-------QLKDL-GK-DYRAWAIDFLGQGMSLPDEDPTP 207 (451)
Q Consensus 141 ~~~g~~l~y~~~g~~----~~~~p~VlllHG~~~~~~~~~~-------~~~~L-~~-~~~Vi~~D~rG~G~S~~~~~~~~ 207 (451)
..+|.++.|..+-|. +++-|.|+++||.+.+...|.. ....+ .. ....+.+...+.+........
T Consensus 30 ~~~g~~~~~~v~lP~~y~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 107 (255)
T d1jjfa_ 30 TATNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAGPGIAD-- 107 (255)
T ss_dssp TTTTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCCCTTCSC--
T ss_pred cCCCCEEEEEEEeCCCCCCCCCCcEEEEEecCCCChHHhhhhhHHHHHHHHHHHhhccCCcceeeecccccccccccc--
Confidence 357888888887554 2334789999999877665521 12222 11 122222222222222111100
Q ss_pred CCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh-----CCCCEEEEEeCcchHHHHHHHHhCCCccc
Q 013006 208 RSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV-----IREPVYVVGNSLGGFVAVYFAACNPHLVK 282 (451)
Q Consensus 208 ~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l-----~~~~v~lvGhS~GG~val~~A~~~P~~v~ 282 (451)
......+.+++++...++.. ..+++.++|+|+||..++.+|.++|++++
T Consensus 108 --------------------------~~~~~~~~~~~~li~~i~~~~~~~~d~~~i~i~G~S~GG~~a~~~a~~~Pd~F~ 161 (255)
T d1jjfa_ 108 --------------------------GYENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFA 161 (255)
T ss_dssp --------------------------HHHHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCS
T ss_pred --------------------------cccchHHHHHHHHHHHHHHhhccccccceeEeeeccchhHHHHHHHHhCCCccc
Confidence 00023345555555555553 23569999999999999999999999999
Q ss_pred eEEEeccC
Q 013006 283 GVTLLNAT 290 (451)
Q Consensus 283 ~lvl~~~~ 290 (451)
+++.+++.
T Consensus 162 ~v~~~sg~ 169 (255)
T d1jjfa_ 162 YIGPISAA 169 (255)
T ss_dssp EEEEESCC
T ss_pred EEEEEccC
Confidence 99999875
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.98 E-value=8.7e-09 Score=93.61 Aligned_cols=115 Identities=14% Similarity=0.094 Sum_probs=75.9
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCCC--ChhcHHHH---HHhhc-CCceEEEEcCCCCCC-CCCCCCCCCCCCCCCch
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFGV--GSFHYEKQ---LKDLG-KDYRAWAIDFLGQGM-SLPDEDPTPRSKEGDST 215 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~~--~~~~~~~~---~~~L~-~~~~Vi~~D~rG~G~-S~~~~~~~~~~~~~~~~ 215 (451)
.|..|.+...++ ..|+|+|+||.++ +...|... .+.+. .++-|+.+|--..+. +..+...
T Consensus 14 ~~r~~~~~v~~~---~~pvlylLhG~~g~~~~~~w~~~~~~~~~~~~~~~iVV~p~g~~~~~y~~~~~~~---------- 80 (267)
T d1r88a_ 14 MGRDIPVAFLAG---GPHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWEQDG---------- 80 (267)
T ss_dssp TTEEEEEEEECC---SSSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTSTTSBCSSCT----------
T ss_pred CCceeeEEEECC---CCCEEEEcCCCCCCCCcchhhhccHHHHHHhhCCeEEEEECCCCCcCCccccccc----------
Confidence 455566665554 3589999999855 34467653 33333 368888888421111 1111000
Q ss_pred hhhhccccCCCCCCccccccccCH-HHHHHHHHHHHHHh---CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 216 EEKNFLWGFGDKAQPWASELAYSV-DLWQDQVCYFIKEV---IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 216 ~~~~~~w~~~~~~~~~~~~~~~s~-~~~a~dv~~ll~~l---~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
...+ ..+.++|..+|++. ..+++.+.|+||||+.|+.+|.++|+++++++.+++.
T Consensus 81 --------------------~~~~~tfl~~eL~~~i~~~~~~d~~r~~i~G~SmGG~~Al~la~~~Pd~F~av~~~SG~ 139 (267)
T d1r88a_ 81 --------------------SKQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGF 139 (267)
T ss_dssp --------------------TCBHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCC
T ss_pred --------------------cccHHHHHHHHHHHHHHHhcCCCCCceEEEEEcchHHHHHHHHHhCcccccEEEEeCCc
Confidence 1233 34556777777653 3467999999999999999999999999999999975
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.97 E-value=4.3e-09 Score=97.97 Aligned_cols=122 Identities=14% Similarity=0.148 Sum_probs=76.1
Q ss_pred CccceeeecCCeEEEEeecCCCCCCCCcEEEecCCC---CChhcHHHHHHhh-cC-CceEEEEcCCCCCCCCCCCCCCCC
Q 013006 134 ITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFG---VGSFHYEKQLKDL-GK-DYRAWAIDFLGQGMSLPDEDPTPR 208 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~---~~~~~~~~~~~~L-~~-~~~Vi~~D~rG~G~S~~~~~~~~~ 208 (451)
+....+...+| .|..+.+.|. ++.|.||++||.+ ++...+..++..| ++ ++.|+.+|+|...... .+
T Consensus 56 ~~~~~i~~~~g-~i~~~iy~P~-~~~P~il~iHGGg~~~g~~~~~~~~~~~l~~~~g~~Vv~v~Yrlap~~~-----~p- 127 (311)
T d1jjia_ 56 VEDRTIKGRNG-DIRVRVYQQK-PDSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHK-----FP- 127 (311)
T ss_dssp EEEEEEEETTE-EEEEEEEESS-SSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTTTSC-----TT-
T ss_pred EEEEEEeCCCC-cEEEEEEcCC-CCceEEEEEcCCCCccCChhhhhhhhhhhhhcCCcEEEEeccccccccc-----cc-
Confidence 34445555555 5555555543 3568999999974 4455666666666 33 8999999999643221 10
Q ss_pred CCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHH---HHhCC--CCEEEEEeCcchHHHHHHHHhC----CC
Q 013006 209 SKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFI---KEVIR--EPVYVVGNSLGGFVAVYFAACN----PH 279 (451)
Q Consensus 209 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll---~~l~~--~~v~lvGhS~GG~val~~A~~~----P~ 279 (451)
..+++..+.+..+. +++++ +++.+.|+|.||.+++.++... ..
T Consensus 128 ----------------------------~~~~d~~~a~~~~~~~~~~~~~d~~ri~v~G~SaGG~la~~~~~~~~~~~~~ 179 (311)
T d1jjia_ 128 ----------------------------AAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGED 179 (311)
T ss_dssp ----------------------------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCC
T ss_pred ----------------------------hhhhhhhhhhhHHHHhHHHhCcChhHEEEEeeecCCcceeechhhhhhcccc
Confidence 23344333333333 33444 5799999999999888776542 33
Q ss_pred ccceEEEeccCC
Q 013006 280 LVKGVTLLNATP 291 (451)
Q Consensus 280 ~v~~lvl~~~~~ 291 (451)
...+.+++.+..
T Consensus 180 ~~~~~~l~~p~~ 191 (311)
T d1jjia_ 180 FIKHQILIYPVV 191 (311)
T ss_dssp CEEEEEEESCCC
T ss_pred ccceeeeeccee
Confidence 577888888753
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=98.95 E-value=5.6e-09 Score=97.31 Aligned_cols=86 Identities=15% Similarity=0.101 Sum_probs=57.2
Q ss_pred CCCcEEEecCCC---CChhcHHHHHHhhc-C-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccc
Q 013006 158 NSPPVLFLPGFG---VGSFHYEKQLKDLG-K-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWA 232 (451)
Q Consensus 158 ~~p~VlllHG~~---~~~~~~~~~~~~L~-~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 232 (451)
..|.||++||.+ ++...+..+...|+ + |+.|+.+|+|.......+
T Consensus 77 ~~Pvvv~iHGGG~~~g~~~~~~~~~~~la~~~G~~V~~vdYrl~pe~~~~------------------------------ 126 (317)
T d1lzla_ 77 PVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPETTFP------------------------------ 126 (317)
T ss_dssp CEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTTTSCTT------------------------------
T ss_pred CCcEEEEecCcccccccccccchHHHhHHhhcCCcccccccccccccccc------------------------------
Confidence 346899999954 45556666766663 3 899999999976543211
Q ss_pred cccccCHHHHHHHHHH---HHHHhCC--CCEEEEEeCcchHHHHHHHHhC
Q 013006 233 SELAYSVDLWQDQVCY---FIKEVIR--EPVYVVGNSLGGFVAVYFAACN 277 (451)
Q Consensus 233 ~~~~~s~~~~a~dv~~---ll~~l~~--~~v~lvGhS~GG~val~~A~~~ 277 (451)
-.+++..+.+.. ..+.+++ ++|+++|+|.||.+++.++.+.
T Consensus 127 ----~~~~d~~~~~~~~~~~~~~~g~D~~rI~l~G~SaGg~la~~~~~~~ 172 (317)
T d1lzla_ 127 ----GPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKA 172 (317)
T ss_dssp ----HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHH
T ss_pred ----ccccccccchhHHHHHHHHhCCCHHHEEEEEeccccHHHHHHHhhh
Confidence 123333333333 3344454 5799999999999999888753
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=98.93 E-value=8.2e-09 Score=98.01 Aligned_cols=127 Identities=17% Similarity=0.077 Sum_probs=81.8
Q ss_pred CccceeeecCCeEEEEeecCCCCC--CCCcEEEecCCCC---Ch--hcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCC
Q 013006 134 ITSCFWEWKPKFNVHYEKAGCENV--NSPPVLFLPGFGV---GS--FHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDP 205 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y~~~g~~~~--~~p~VlllHG~~~---~~--~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~ 205 (451)
+....+...||..|....+-|.+. ..|.||++||.+. +. ..++.++..|+ .++.|+.+|+|..+...+ +.+
T Consensus 79 ~~~~~i~~~dg~~i~~~iy~P~~~~~~~Pviv~~HGGG~~~gs~~~~~~~~~~~~la~~g~~VvsvdYRla~~~~p-e~~ 157 (358)
T d1jkma_ 79 TSTETILGVDGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEG-HHP 157 (358)
T ss_dssp EEEEEEECTTSCEEEEEEEEETTCCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTE-ECC
T ss_pred EEEEEEeCCCCCEEEEEEEecCCCCCCCCeEEEecCCeeeeccccccccchHHHHHHhhhheeeeeeecccccccc-cCC
Confidence 344455567887777665544332 3468999999743 22 34556677764 579999999998644321 111
Q ss_pred CCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHH---HhCCCCEEEEEeCcchHHHHHHHHh-----C
Q 013006 206 TPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIK---EVIREPVYVVGNSLGGFVAVYFAAC-----N 277 (451)
Q Consensus 206 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~---~l~~~~v~lvGhS~GG~val~~A~~-----~ 277 (451)
.+ ..++|..+.+..+.+ .++.+++.|+|+|.||.+++.++.. .
T Consensus 158 ~p-----------------------------~~l~D~~~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~ 208 (358)
T d1jkma_ 158 FP-----------------------------SGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGR 208 (358)
T ss_dssp TT-----------------------------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTC
T ss_pred Cc-----------------------------hhhHHHHHHHHHHHHhccccCCccceeecccCchHHHHHHHHHHhhcCC
Confidence 10 245555555554443 4567899999999999998877654 2
Q ss_pred CCccceEEEeccC
Q 013006 278 PHLVKGVTLLNAT 290 (451)
Q Consensus 278 P~~v~~lvl~~~~ 290 (451)
+..+.++++..+.
T Consensus 209 ~~~~~~~~~~~p~ 221 (358)
T d1jkma_ 209 LDAIDGVYASIPY 221 (358)
T ss_dssp GGGCSEEEEESCC
T ss_pred Cccccccccccce
Confidence 3467888888764
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.91 E-value=2.4e-08 Score=91.48 Aligned_cols=125 Identities=11% Similarity=0.027 Sum_probs=78.5
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCCCC--hhcHHH---HHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchh
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFGVG--SFHYEK---QLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTE 216 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~~~--~~~~~~---~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~ 216 (451)
.|.++.+...-+ ....|+|+|+||+++. ...|.. +.+.+.+ ++.|++++..+.+.......+..
T Consensus 19 ~~r~~~~~v~~p-~~~~Pvl~llhG~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--------- 88 (288)
T d1sfra_ 19 MGRDIKVQFQSG-GANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYSDWYQPAC--------- 88 (288)
T ss_dssp TTEEEEEEEECC-STTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTTCBCSSCEE---------
T ss_pred CCcEEEEEEeCC-CCCceEEEEcCCCCCCCcchhhhhhccHHHHHHhCCCEEEEeccCCCCCCccccCccc---------
Confidence 455555544322 2356899999998754 334543 2334433 68899998877655432211100
Q ss_pred hhhccccCCCCCCccccccccC-HHHHHHHHHHHHHH-hC--CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 217 EKNFLWGFGDKAQPWASELAYS-VDLWQDQVCYFIKE-VI--REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 217 ~~~~~w~~~~~~~~~~~~~~~s-~~~~a~dv~~ll~~-l~--~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
.. .. ..... ...+++++...|++ .. .+++.+.|+||||..|+.++.++|+++++++.+++.
T Consensus 89 --~~---------~~--~~~~~~~~~~~~el~~~i~~~~~~d~~r~~i~G~S~GG~~A~~~a~~~pd~f~av~~~Sg~ 153 (288)
T d1sfra_ 89 --GK---------AG--CQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGL 153 (288)
T ss_dssp --ET---------TE--EECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCC
T ss_pred --cc---------cc--ccchhHHHHHHHHhHHHHHHhcCCCCCceEEEEEccHHHHHHHHHHhccccccEEEEecCc
Confidence 00 00 00012 33455666666644 33 357999999999999999999999999999999975
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.90 E-value=6.7e-09 Score=94.21 Aligned_cols=131 Identities=19% Similarity=0.111 Sum_probs=72.3
Q ss_pred ceeeecCCeEEEEeecCCC----CCCCCcEEEecCCCCChhc--H-HHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCC
Q 013006 137 CFWEWKPKFNVHYEKAGCE----NVNSPPVLFLPGFGVGSFH--Y-EKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPR 208 (451)
Q Consensus 137 ~~~~~~~g~~l~y~~~g~~----~~~~p~VlllHG~~~~~~~--~-~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~ 208 (451)
-.++..||.+|++...-|. +++.|.||++||.+..... + ......+.. ++-+...+.++..........
T Consensus 10 v~~~s~DG~~i~~~l~~P~~~~~~~~~P~iv~~HGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 86 (280)
T d1qfma2 10 IFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHK--- 86 (280)
T ss_dssp EEEECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHHHHH---
T ss_pred EEEECCCCCEEEEEEEEcCCCCCCCCeEEEEEECCCCcccCCCCcchhhhhhhcccceeeeccccccccccchhhhh---
Confidence 3456679999988876654 2345899999996543322 1 222233333 455556665554332110000
Q ss_pred CCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhC--CCCEEEEEeCcchHHHHHHHHhCCCccceEEE
Q 013006 209 SKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI--REPVYVVGNSLGGFVAVYFAACNPHLVKGVTL 286 (451)
Q Consensus 209 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~--~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl 286 (451)
... ........++............. .....+.|+|.||..+...+...++.+++++.
T Consensus 87 ----------------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gg~~~~~~~~~~~~~~~~~~~ 146 (280)
T d1qfma2 87 ----------------GGI----LANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIA 146 (280)
T ss_dssp ----------------TTS----GGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEE
T ss_pred ----------------ccc----ccccccccchhhhhhhhhhhhcccccccccccccccccchhhhhhhcccchhhheee
Confidence 000 00000112222222222222222 25688999999999999999999988888887
Q ss_pred eccC
Q 013006 287 LNAT 290 (451)
Q Consensus 287 ~~~~ 290 (451)
..+.
T Consensus 147 ~~~~ 150 (280)
T d1qfma2 147 QVGV 150 (280)
T ss_dssp ESCC
T ss_pred eccc
Confidence 7765
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.88 E-value=2e-09 Score=97.38 Aligned_cols=101 Identities=15% Similarity=0.156 Sum_probs=74.4
Q ss_pred CcEEEecCCCCCh---hcHHHHHHhhcC---CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccc
Q 013006 160 PPVLFLPGFGVGS---FHYEKQLKDLGK---DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWAS 233 (451)
Q Consensus 160 p~VlllHG~~~~~---~~~~~~~~~L~~---~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 233 (451)
.||||+||++++. ..|..+...|.+ ++.|+++++.....+.. ...+
T Consensus 6 ~PVVLvHGlg~s~~~~~~m~~l~~~l~~~~pG~~V~~l~~g~~~~~~~----------------~~~~------------ 57 (279)
T d1ei9a_ 6 LPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEIGKTLREDV----------------ENSF------------ 57 (279)
T ss_dssp CCEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCCSSSHHHHH----------------HHHH------------
T ss_pred CcEEEECCCCCCCCChHHHHHHHHHHHHHCCCeEEEEEEcCCCccccc----------------ccch------------
Confidence 3899999998753 457777777743 78999999765433210 0001
Q ss_pred ccccCHHHHHHHHHHHHHHh--CCCCEEEEEeCcchHHHHHHHHhCCC-ccceEEEeccC
Q 013006 234 ELAYSVDLWQDQVCYFIKEV--IREPVYVVGNSLGGFVAVYFAACNPH-LVKGVTLLNAT 290 (451)
Q Consensus 234 ~~~~s~~~~a~dv~~ll~~l--~~~~v~lvGhS~GG~val~~A~~~P~-~v~~lvl~~~~ 290 (451)
...++++++.+.+.|+.. ..+++++|||||||.++-.++.++++ .|+.+|.++++
T Consensus 58 --~~~~~~~~e~v~~~I~~~~~~~~~v~lVGhSqGGLiaR~~i~~~~~~~V~~lITLgsP 115 (279)
T d1ei9a_ 58 --FLNVNSQVTTVCQILAKDPKLQQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQ 115 (279)
T ss_dssp --HSCHHHHHHHHHHHHHSCGGGTTCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCC
T ss_pred --hhhHHHHHHHHHHHHHhccccccceeEEEEccccHHHHHHHHHcCCCCcceEEEECCC
Confidence 146777788887777653 34689999999999999999999875 69999999974
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=98.83 E-value=4.6e-09 Score=100.81 Aligned_cols=139 Identities=14% Similarity=0.008 Sum_probs=87.3
Q ss_pred ccceeeecCCeEEEEeecCCCCCC-CCcEEEecCCCCChh------------cHHHHHHhh-cCCceEEEEcCCCCCCCC
Q 013006 135 TSCFWEWKPKFNVHYEKAGCENVN-SPPVLFLPGFGVGSF------------HYEKQLKDL-GKDYRAWAIDFLGQGMSL 200 (451)
Q Consensus 135 ~~~~~~~~~g~~l~y~~~g~~~~~-~p~VlllHG~~~~~~------------~~~~~~~~L-~~~~~Vi~~D~rG~G~S~ 200 (451)
+...++.+||++|+...+-|.+.. -|+||+.|+++.... ........| .+||.|+.+|.||+|.|+
T Consensus 29 ~~v~ipmrDG~~L~~~v~~P~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~S~ 108 (385)
T d2b9va2 29 REVMVPMRDGVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQ 108 (385)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCC
T ss_pred eEEEEECCCCCEEEEEEEEcCCCCceeEEEEEccCCCCCccccCCcccccccccchHHHHHHhCCcEEEEEcCCcccCCC
Confidence 456688899999999877665433 366777777753211 111233445 568999999999999997
Q ss_pred CCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhCC
Q 013006 201 PDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACNP 278 (451)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~P 278 (451)
..-.... ... ...........+|..+.|.-+.++... .+|.++|+|+||++++.+|...|
T Consensus 109 G~~~~~~----------------~~~--~~~~~~~~~e~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~~~~ 170 (385)
T d2b9va2 109 GDYVMTR----------------PPH--GPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPH 170 (385)
T ss_dssp SCCCTTC----------------CCS--BTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCC
T ss_pred Cceeecc----------------ccc--cccccchhhHHHHHHHHHHHHHhccCccccceeeccccHHHHHHHHHHhccC
Confidence 5322110 000 000000001334444433333333223 57999999999999999999999
Q ss_pred CccceEEEeccCC
Q 013006 279 HLVKGVTLLNATP 291 (451)
Q Consensus 279 ~~v~~lvl~~~~~ 291 (451)
..+++++...+..
T Consensus 171 ~~l~a~~~~~~~~ 183 (385)
T d2b9va2 171 PALKVAAPESPMV 183 (385)
T ss_dssp TTEEEEEEEEECC
T ss_pred CcceEEEEecccc
Confidence 8999999888753
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=98.83 E-value=2.5e-08 Score=92.33 Aligned_cols=123 Identities=14% Similarity=0.080 Sum_probs=75.0
Q ss_pred CccceeeecCCeEEEEeecCCCC--CCCCcEEEecCCC---CChhcHHHHHHhhcC--CceEEEEcCCCCCCCCCCCCCC
Q 013006 134 ITSCFWEWKPKFNVHYEKAGCEN--VNSPPVLFLPGFG---VGSFHYEKQLKDLGK--DYRAWAIDFLGQGMSLPDEDPT 206 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y~~~g~~~--~~~p~VlllHG~~---~~~~~~~~~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~~ 206 (451)
++...++ .+|.+|....+-|++ ++.|.||++||.+ ++...+..+...++. +..|+.+|+|.......+
T Consensus 46 ~~~~~~~-~~g~~i~~~~y~P~~~~~~~Pvvv~iHGGg~~~g~~~~~~~~~~~~a~~~~~~v~~v~Yrl~p~~~~p---- 120 (308)
T d1u4na_ 46 VREFDMD-LPGRTLKVRMYRPEGVEPPYPALVYYHGGGWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHKFP---- 120 (308)
T ss_dssp EEEEEEE-ETTEEEEEEEEECTTCCSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCTT----
T ss_pred EEEEEEe-cCCceEEEEEEeccccCCCCCEEEEEecCeeeeeccccccchhhhhhhcccccccccccccccccccc----
Confidence 3333333 367666665544432 3457899999964 455666777777644 477889999855332110
Q ss_pred CCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh---C--CCCEEEEEeCcchHHHHHHHHhCC---
Q 013006 207 PRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV---I--REPVYVVGNSLGGFVAVYFAACNP--- 278 (451)
Q Consensus 207 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l---~--~~~v~lvGhS~GG~val~~A~~~P--- 278 (451)
...+|..+.+..+.+.. + .+++++.|+|.||.+++.++....
T Consensus 121 ------------------------------~~~~D~~~~~~~l~~~~~~~~~d~~ri~~~G~SaGG~la~~~~~~~~~~~ 170 (308)
T d1u4na_ 121 ------------------------------AAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERG 170 (308)
T ss_dssp ------------------------------HHHHHHHHHHHHHHTTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHHT
T ss_pred ------------------------------cccchhhhhhhHHHHhHHhcCCCcceEEEeeccccchhHHHHHHhhhhcc
Confidence 23444444444444322 2 357999999999999988877543
Q ss_pred -CccceEEEeccCC
Q 013006 279 -HLVKGVTLLNATP 291 (451)
Q Consensus 279 -~~v~~lvl~~~~~ 291 (451)
..+.+..++.+..
T Consensus 171 ~~~~~~~~~~~~~~ 184 (308)
T d1u4na_ 171 GPALAFQLLIYPST 184 (308)
T ss_dssp CCCCCCEEEESCCC
T ss_pred CCCccccccccccc
Confidence 2456667776643
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.83 E-value=3.8e-08 Score=89.87 Aligned_cols=123 Identities=12% Similarity=0.091 Sum_probs=77.6
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCCC--ChhcHHH---HHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchh
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFGV--GSFHYEK---QLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTE 216 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~~--~~~~~~~---~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~ 216 (451)
-|.+|.....+. +.|+|+|+||.++ +...|.. +.+.+. .++-|+.+|-...+....
T Consensus 16 ~~r~i~~~~~~~---~~p~lyllhG~~g~~d~~~W~~~~~~~~~~~~~~~ivV~P~~~~~~~~~~--------------- 77 (280)
T d1dqza_ 16 MGRDIKVQFQGG---GPHAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYTD--------------- 77 (280)
T ss_dssp TTEEEEEEEECC---SSSEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTCTTSB---------------
T ss_pred CCCcceEEeeCC---CCCEEEECCCCCCCCccchhhhcchHHHHHHhCCcEEEEECCCCCCcCcc---------------
Confidence 355665555443 4589999999865 4556764 233343 368999998432222111
Q ss_pred hhhccccCCCCCCccccccccCHH-HHHHHHHHHHHHh---CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 217 EKNFLWGFGDKAQPWASELAYSVD-LWQDQVCYFIKEV---IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 217 ~~~~~w~~~~~~~~~~~~~~~s~~-~~a~dv~~ll~~l---~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
|...+...... .....+ .+++++...|++. ..+++.+.|+||||+.|+.+|.++|+++++++.+++.
T Consensus 78 -----~~~~~~~~~~~--~~~~~~~~~~~el~~~i~~~~~~d~~r~~i~G~SmGG~~Al~lA~~~Pd~F~av~s~SG~ 148 (280)
T d1dqza_ 78 -----WYQPSQSNGQN--YTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGF 148 (280)
T ss_dssp -----CSSSCTTTTCC--SCCBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCC
T ss_pred -----ccCCcccccCC--cchhHHHHHHHHHHHHHHHhcCCCCCceEEEEechHHHHHHHHHHhCcCceeEEEEecCc
Confidence 10000000000 012333 3467777777653 3467999999999999999999999999999999985
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=98.79 E-value=2.3e-08 Score=89.44 Aligned_cols=52 Identities=21% Similarity=0.244 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHhC-----CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 240 DLWQDQVCYFIKEVI-----REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~-----~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
+.+.+++..+++... .+++.++|+||||..++.++.+||+++.+++.+++..
T Consensus 102 ~~~~~el~~~v~~~~~~~~d~~~~~i~G~S~GG~~al~~~~~~P~~F~a~~~~sg~~ 158 (246)
T d3c8da2 102 LAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSY 158 (246)
T ss_dssp HHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCT
T ss_pred HHHHHHhhhHHHHhcccccCccceEEEecCchhHHHhhhhccCCchhcEEEcCCccc
Confidence 344566666666642 2579999999999999999999999999999999863
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=98.70 E-value=5.7e-09 Score=96.63 Aligned_cols=105 Identities=16% Similarity=0.172 Sum_probs=68.6
Q ss_pred CCCCCcEEEecCCCCChh-cHH-HHHHh-hcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcc
Q 013006 156 NVNSPPVLFLPGFGVGSF-HYE-KQLKD-LGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPW 231 (451)
Q Consensus 156 ~~~~p~VlllHG~~~~~~-~~~-~~~~~-L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 231 (451)
++++|+++++||+.++.. .|. .+... |.. +++||++||.... +. .-
T Consensus 67 ~~~~pt~iiiHGw~~~~~~~~~~~~~~a~l~~~d~NVI~VDW~~~a-~~--~Y--------------------------- 116 (337)
T d1rp1a2 67 QTDKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGS-QT--SY--------------------------- 116 (337)
T ss_dssp CTTSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHH-SS--CH---------------------------
T ss_pred CCCCCEEEEeCCCcCCCCcchHHHHHHHHHhcCCceEEEEeecccc-Cc--ch---------------------------
Confidence 356899999999976654 343 34444 444 5999999997532 11 00
Q ss_pred ccccccCHHHHHHHHHHHHH----HhC--CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCC
Q 013006 232 ASELAYSVDLWQDQVCYFIK----EVI--REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPF 292 (451)
Q Consensus 232 ~~~~~~s~~~~a~dv~~ll~----~l~--~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~ 292 (451)
...........+.+..+|+ ..+ .++++|||||+||.+|-.++ ++..++..++.++|+.+
T Consensus 117 -~~a~~n~~~Vg~~ia~~i~~l~~~~g~~~~~vhlIGhSLGAhvAG~aG-~~~~~l~rItgLDPA~P 181 (337)
T d1rp1a2 117 -TQAANNVRVVGAQVAQMLSMLSANYSYSPSQVQLIGHSLGAHVAGEAG-SRTPGLGRITGLDPVEA 181 (337)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHH-HTSTTCCEEEEESCCCT
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHhcCCChhheEEEeecHHHhhhHHHH-HhhccccceeccCCCcc
Confidence 0001233444455554544 434 47899999999999997554 55568999999999754
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.69 E-value=3.3e-06 Score=82.06 Aligned_cols=128 Identities=18% Similarity=0.121 Sum_probs=88.4
Q ss_pred CccceeeecCCeEEEEeecCCCC--CCCCcEEEecCCCCChhcHHHHHHh-----------h-------cCCceEEEEcC
Q 013006 134 ITSCFWEWKPKFNVHYEKAGCEN--VNSPPVLFLPGFGVGSFHYEKQLKD-----------L-------GKDYRAWAIDF 193 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y~~~g~~~--~~~p~VlllHG~~~~~~~~~~~~~~-----------L-------~~~~~Vi~~D~ 193 (451)
--+.++...++..|+|..+...+ .++|.+|.+.|.++++..|-.+.+. | .+..+|+.+|.
T Consensus 21 ~ysGyl~~~~~~~lffw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~~~e~GP~~v~~~~~~~~~N~~SW~~~anllfIDq 100 (452)
T d1ivya_ 21 QYSGYLKSSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLES 100 (452)
T ss_dssp EEEEEEECSTTEEEEEEEECCSSCGGGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEECC
T ss_pred ceeeeeecCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHHHHHccCCcEEcCCCCeeccCCcchhcccCEEEEec
Confidence 33577777888999998886543 3478999999999999888554321 1 12367999998
Q ss_pred C-CCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHH----HHh---CCCCEEEEEeCc
Q 013006 194 L-GQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFI----KEV---IREPVYVVGNSL 265 (451)
Q Consensus 194 r-G~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll----~~l---~~~~v~lvGhS~ 265 (451)
| |.|.|....... ..+.++.+.|+.++| +.. ...+++|.|-|+
T Consensus 101 PvGtGfS~~~~~~~-----------------------------~~~~~~~a~d~~~~l~~f~~~fp~~~~~~~yi~GESY 151 (452)
T d1ivya_ 101 PAGVGFSYSDDKFY-----------------------------ATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESY 151 (452)
T ss_dssp STTSTTCEESSCCC-----------------------------CCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETT
T ss_pred CCCcccccCCCCCC-----------------------------CCCcHHHHHHHHHHHHHHHHhchhhcCCceEEeeccc
Confidence 6 999996432211 124445555554444 433 346899999999
Q ss_pred chHHHHHHHHh----CCCccceEEEeccC
Q 013006 266 GGFVAVYFAAC----NPHLVKGVTLLNAT 290 (451)
Q Consensus 266 GG~val~~A~~----~P~~v~~lvl~~~~ 290 (451)
||..+-.+|.. .+-.++++++.++.
T Consensus 152 gG~y~P~ia~~i~~~~~i~l~Gi~igng~ 180 (452)
T d1ivya_ 152 AGIYIPTLAVLVMQDPSMNLQGLAVGNGL 180 (452)
T ss_dssp HHHHHHHHHHHHTTCTTSCEEEEEEESCC
T ss_pred cchhhHHHHHHHHhcCcccccceEcCCCc
Confidence 99988877764 22358999999875
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.66 E-value=9.3e-09 Score=95.01 Aligned_cols=106 Identities=14% Similarity=0.184 Sum_probs=74.0
Q ss_pred CCCCCcEEEecCCCCChh-cHH-HHHHh-hcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcc
Q 013006 156 NVNSPPVLFLPGFGVGSF-HYE-KQLKD-LGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPW 231 (451)
Q Consensus 156 ~~~~p~VlllHG~~~~~~-~~~-~~~~~-L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 231 (451)
+++.|+++++||+.++.. .|. .+... |.+ +++||++||...-... +
T Consensus 67 ~~~~pt~iiiHG~~~~~~~~~~~~~~~a~l~~~d~NVi~VDW~~~a~~~------------------------------Y 116 (338)
T d1bu8a2 67 QLDRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRTE------------------------------Y 116 (338)
T ss_dssp CTTSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHHSSC------------------------------H
T ss_pred CCCCceEEEeCcccCCCCcccHHHHHHHHHhcCCceEEEEechhhcccc------------------------------h
Confidence 456899999999976543 343 34444 444 5999999997532110 0
Q ss_pred ccccccCHHHHHHHHHHHHHHh----C--CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCC
Q 013006 232 ASELAYSVDLWQDQVCYFIKEV----I--REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPF 292 (451)
Q Consensus 232 ~~~~~~s~~~~a~dv~~ll~~l----~--~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~ 292 (451)
...........+.+..+|+.+ + .++++|||||+|+.+|-.+..+.+.+|..++-++|+.+
T Consensus 117 -~~a~~n~~~Vg~~ia~~i~~l~~~~g~~~~~vhlIGhSLGAhiaG~ag~~l~~kigrItgLDPA~P 182 (338)
T d1bu8a2 117 -TQASYNTRVVGAEIAFLVQVLSTEMGYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEP 182 (338)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred -HHHHHhHHHHHHHHHHHHHHHHHhcCCCcceeEEEeccHHHHHHHHHHHhhccccccccccccCcC
Confidence 000134455555656565543 3 47899999999999999999988889999999999753
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.47 E-value=5.4e-05 Score=72.55 Aligned_cols=125 Identities=14% Similarity=0.104 Sum_probs=83.8
Q ss_pred cceeeecC-CeEEEEeecCCCC--CCCCcEEEecCCCCChhcHHHHHHh----------h-------cCCceEEEEcC-C
Q 013006 136 SCFWEWKP-KFNVHYEKAGCEN--VNSPPVLFLPGFGVGSFHYEKQLKD----------L-------GKDYRAWAIDF-L 194 (451)
Q Consensus 136 ~~~~~~~~-g~~l~y~~~g~~~--~~~p~VlllHG~~~~~~~~~~~~~~----------L-------~~~~~Vi~~D~-r 194 (451)
+.++...+ +..|+|......+ .+.|.||.+.|.++++..|-.+.+. + .+..+++.+|. -
T Consensus 18 sGyl~v~~~~~~lfyw~~~s~~~~~~~Pl~~WlnGGPG~SS~~g~~~e~GP~~i~~~~~~~~N~~sW~~~anllfiD~Pv 97 (421)
T d1wpxa1 18 TGYLDVEDEDKHFFFWTFESRNDPAKDPVILWLNGGPGCSSLTGLFFELGPSSIGPDLKPIGNPYSWNSNATVIFLDQPV 97 (421)
T ss_dssp EEEEECTTSCCEEEEEEECCSSCTTTSCEEEEECCTTTBCTHHHHHHTTSSEEECTTSCEEECTTCGGGSSEEEEECCST
T ss_pred eeeeecCCCCceEEEEEEEeCCCCCCCCEEEEECCCCcHHHHHHHHHhcCCcEECCCCccccCCcccccccCEEEEecCC
Confidence 45666654 5678887665432 3568999999999999888555421 1 12368999995 5
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh---------CCCCEEEEEeCc
Q 013006 195 GQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV---------IREPVYVVGNSL 265 (451)
Q Consensus 195 G~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l---------~~~~v~lvGhS~ 265 (451)
|.|.|....... .+-...++|+.++|+.. ...+++|.|-|+
T Consensus 98 GtGfSy~~~~~~------------------------------~~~~~~a~d~~~fl~~f~~~fp~~~~k~~~~yi~GESY 147 (421)
T d1wpxa1 98 NVGFSYSGSSGV------------------------------SNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGESY 147 (421)
T ss_dssp TSTTCBCSSCCC------------------------------CSHHHHHHHHHHHHHHHHHHCTHHHHTCCCEEEEEETT
T ss_pred CCCceecCCccc------------------------------cchHHHHHHHHHHHHHHHHhChhhhccCCCcEEeeecc
Confidence 999995332210 34455555555555332 235899999999
Q ss_pred chHHHHHHHHhC------CCccceEEEeccC
Q 013006 266 GGFVAVYFAACN------PHLVKGVTLLNAT 290 (451)
Q Consensus 266 GG~val~~A~~~------P~~v~~lvl~~~~ 290 (451)
||..+-.+|.+. +-.++++++.++.
T Consensus 148 gG~yvP~la~~i~~~~~~~inlkGi~iGng~ 178 (421)
T d1wpxa1 148 AGHYIPVFASEILSHKDRNFNLTSVLIGNGL 178 (421)
T ss_dssp HHHHHHHHHHHHHHCSSCSSCCCEEEEESCC
T ss_pred cccccHHHHHHHHHccCCCcceeeeEecCCc
Confidence 999888777532 2357899999875
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.42 E-value=9.6e-06 Score=74.03 Aligned_cols=118 Identities=16% Similarity=0.247 Sum_probs=68.9
Q ss_pred CCcEEEecCCCCChhcHHHH--HHhhc--CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccc-
Q 013006 159 SPPVLFLPGFGVGSFHYEKQ--LKDLG--KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWAS- 233 (451)
Q Consensus 159 ~p~VlllHG~~~~~~~~~~~--~~~L~--~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~- 233 (451)
-|+|.++||++++...|... +..++ .+..|+.++......-.... ....|.++....-+.+
T Consensus 49 yPVLYlLhG~~~~~~~w~~~~~~~~~~~~~~~~vv~~~~~p~~~~~~~~--------------~~~~~~~g~~~~~y~d~ 114 (299)
T d1pv1a_ 49 IPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVAND--------------PEGSWDFGQGAGFYLNA 114 (299)
T ss_dssp BCEEEEECCTTCCHHHHHHHSCHHHHHHHHTCEEEECCSSCCSTTSCCC--------------TTCCSSSSSSCCTTCBC
T ss_pred CCEEEEcCCCCCCHHHHHHhhhHHHHHHHcCCceecCCCcccccccCCc--------------ccccccccCCCcccccc
Confidence 48899999999998888543 22222 25778887754332211110 0011111111000000
Q ss_pred -----ccccCH-HHHHHHHHHHHHHh-CC---------CCEEEEEeCcchHHHHHHHHh--CCCccceEEEeccC
Q 013006 234 -----ELAYSV-DLWQDQVCYFIKEV-IR---------EPVYVVGNSLGGFVAVYFAAC--NPHLVKGVTLLNAT 290 (451)
Q Consensus 234 -----~~~~s~-~~~a~dv~~ll~~l-~~---------~~v~lvGhS~GG~val~~A~~--~P~~v~~lvl~~~~ 290 (451)
...+.+ +.+++++..+++.. .. ++..|.||||||.-|+.+|.+ +|++..++..+++.
T Consensus 115 ~~~p~~~~~~~~~~i~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~SmGG~gAl~~al~~~~p~~f~~~~s~s~~ 189 (299)
T d1pv1a_ 115 TQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKGYSGKRYKSCSAFAPI 189 (299)
T ss_dssp CSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEETHHHHHHHHHHHHTGGGTCCSEEEEESCC
T ss_pred ccCCcccccchHHHHHHHHHHHHHHhCCcccccccccccceEEEeecccHHHHHHHHHHhcCCCceEEEeeccCc
Confidence 001223 33456676666553 22 468999999999999999986 48899999998875
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=98.30 E-value=2.8e-06 Score=76.28 Aligned_cols=36 Identities=19% Similarity=0.154 Sum_probs=33.6
Q ss_pred CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 255 REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 255 ~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
.+++.+.|+||||..++.+|.++|+++++++.+++.
T Consensus 143 ~~~~~i~G~S~GG~~a~~~a~~~pd~f~a~~~~sg~ 178 (273)
T d1wb4a1 143 RMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGD 178 (273)
T ss_dssp GGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCC
T ss_pred ccceEEEeeCCcchhhhhhhhcCCCcceEEEEeCcc
Confidence 357999999999999999999999999999999985
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.27 E-value=9.1e-08 Score=90.41 Aligned_cols=94 Identities=18% Similarity=0.129 Sum_probs=67.9
Q ss_pred CCCcEEEecCCCCCh-------hcHHH----HHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCC
Q 013006 158 NSPPVLFLPGFGVGS-------FHYEK----QLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFG 225 (451)
Q Consensus 158 ~~p~VlllHG~~~~~-------~~~~~----~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~ 225 (451)
++-||||+||+.+-. ..|.. +.+.| .+|++|++......+
T Consensus 6 ~~yPIVLvHGl~Gf~~~~l~~~~YW~G~~~~I~~~L~~~G~~V~~~~V~p~~---------------------------- 57 (388)
T d1ku0a_ 6 NDAPIVLLHGFTGWGREEMLGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLS---------------------------- 57 (388)
T ss_dssp CCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEECCCCSSB----------------------------
T ss_pred CCCCEEEeCCcccCCccccCcccccCCchhhhHHHHHhCCCEEEEeccCCcc----------------------------
Confidence 456999999985432 24553 55667 558999999875442
Q ss_pred CCCCccccccccCHHHHHHHHHHHHHHh----C-------------------------CCCEEEEEeCcchHHHHHHHHh
Q 013006 226 DKAQPWASELAYSVDLWQDQVCYFIKEV----I-------------------------REPVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 226 ~~~~~~~~~~~~s~~~~a~dv~~ll~~l----~-------------------------~~~v~lvGhS~GG~val~~A~~ 276 (451)
+.++=++++...|+.. + ..||+||||||||..+-.++..
T Consensus 58 ------------S~~~RA~eL~~~I~~~~~d~G~~hs~~~~~~~~~r~y~g~~~~~~~~~kVnLIgHS~GGld~Ryl~~~ 125 (388)
T d1ku0a_ 58 ------------SNWDRACEAYAQLVGGTVDYGAAHAAKHGHARFGRTYPGLLPELKRGGRVHIIAHSQGGQTARMLVSL 125 (388)
T ss_dssp ------------CHHHHHHHHHHHHHCEEEECCHHHHHHHTSCSEEEEECCSCGGGGGTCCEEEEEETTHHHHHHHHHHH
T ss_pred ------------CHHHHHHHHHHHHhhhhhhhhHhHHhhhcccccCccCcccccccccCCceeEeecccccHHHHHHHHH
Confidence 5566666776666542 1 1489999999999999988875
Q ss_pred CC-------------------------CccceEEEeccCC
Q 013006 277 NP-------------------------HLVKGVTLLNATP 291 (451)
Q Consensus 277 ~P-------------------------~~v~~lvl~~~~~ 291 (451)
.| ++|++|+-++++-
T Consensus 126 l~~~~~~~~~~~~~~~~~~~~l~~~~~~~V~SvTTIsTPH 165 (388)
T d1ku0a_ 126 LENGSQEEREYAKEHNVSLSPLFEGGHRFVLSVTTIATPH 165 (388)
T ss_dssp HHHCCHHHHHHHHHHTCCCCGGGTCCCCCEEEEEEESCCT
T ss_pred hccccccccccccccccccccccccCCcceEEEEeccCCC
Confidence 44 3799999999753
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=98.27 E-value=2.2e-06 Score=78.89 Aligned_cols=45 Identities=24% Similarity=0.191 Sum_probs=37.2
Q ss_pred CCCEEEEeeCCCCCCChHHHHHHHHHCCC------CcEEEeCCCCCCcccc
Q 013006 397 GVPICLIYGKEDPWVKPVWGLQVKRQVPE------APYYEISPAGHCPHDE 441 (451)
Q Consensus 397 ~~PvLii~G~~D~~v~~~~~~~l~~~lp~------~~~~~i~~~gH~~~~e 441 (451)
+.|+++++|++|..|++..++++.+.+.+ ++++..+++||-+.-+
T Consensus 90 ~~pvll~hG~~D~~Vpp~~s~~l~~~l~~~~~~~~v~yv~~~gagH~fpT~ 140 (318)
T d2d81a1 90 QRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTD 140 (318)
T ss_dssp GCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEES
T ss_pred CCCEEEEecCCCCCcCHHHHHHHHHHHHcCcCCCceEEEEeCCCCCCCCCC
Confidence 57999999999999999999888877642 4567889999987654
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=98.08 E-value=2.3e-06 Score=76.62 Aligned_cols=34 Identities=12% Similarity=0.107 Sum_probs=27.4
Q ss_pred CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 256 EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 256 ~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
+++.|+|+|+||..++.++.+ ++.+.+++.+++.
T Consensus 141 ~~~~i~G~S~GG~~a~~~~~~-~~~f~~~~a~s~~ 174 (265)
T d2gzsa1 141 QRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSASPS 174 (265)
T ss_dssp EEEEEEEETHHHHHHHHHHHH-CSSCSEEEEESGG
T ss_pred CceEEEeccHHHHHHHHHHHc-CcccCEEEEECCc
Confidence 468899999999999987665 5578888887764
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=97.88 E-value=0.00056 Score=66.41 Aligned_cols=126 Identities=17% Similarity=0.153 Sum_probs=78.9
Q ss_pred CeEEEEeecCC----CCCCCCcEEEecCCCCChhcHHHHHHh----------h-------cCCceEEEEcCC-CCCCCCC
Q 013006 144 KFNVHYEKAGC----ENVNSPPVLFLPGFGVGSFHYEKQLKD----------L-------GKDYRAWAIDFL-GQGMSLP 201 (451)
Q Consensus 144 g~~l~y~~~g~----~~~~~p~VlllHG~~~~~~~~~~~~~~----------L-------~~~~~Vi~~D~r-G~G~S~~ 201 (451)
+..++|..+.. ++.++|.||.+.|.++++..+-.+.+. | .+..+|+.+|.| |.|.|-.
T Consensus 48 ~~~~ffw~fe~~~~~~~~~~Pl~lWlnGGPGcSS~~g~f~E~GP~~v~~~~~l~~Np~SWn~~an~lfIDqPvGvGfSy~ 127 (483)
T d1ac5a_ 48 DLEYFFWKFTNNDSNGNVDRPLIIWLNGGPGCSSMDGALVESGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTGTGFSVE 127 (483)
T ss_dssp CCEEEEEEEECSCSGGGSSCCEEEEECCTTTBCTHHHHHHSSSSEEECTTSCEEECTTCGGGTSEEEEECCSTTSTTCSS
T ss_pred cceEEEEEEEecCCCCCCCCCEEEEECCCCcHHHHHHHHHccCCeEECCCCceeeCCCcccccCCEEEEeCCCCcCeeec
Confidence 34666654422 122358999999999998887554321 1 124689999975 9999964
Q ss_pred CCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh-------CCCCEEEEEeCcchHHHHHHH
Q 013006 202 DEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV-------IREPVYVVGNSLGGFVAVYFA 274 (451)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l-------~~~~v~lvGhS~GG~val~~A 274 (451)
..... ...... ....+.++.++++..+|+.. ...+++|.|-|+||..+-.+|
T Consensus 128 ~~~~~----------~~~~~~-----------~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yI~GESYgG~YvP~la 186 (483)
T d1ac5a_ 128 QNKDE----------GKIDKN-----------KFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFA 186 (483)
T ss_dssp CCSSG----------GGSCTT-----------SSCCSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHH
T ss_pred CCCCc----------cccccc-----------cccCCHHHHHHHHHHHHHHHHHhCcccccCCeEEeecccccchHHHHH
Confidence 32110 000000 01246667777776666542 346899999999998887777
Q ss_pred HhC------------CCccceEEEeccC
Q 013006 275 ACN------------PHLVKGVTLLNAT 290 (451)
Q Consensus 275 ~~~------------P~~v~~lvl~~~~ 290 (451)
... +=.++++.+-++.
T Consensus 187 ~~i~~~n~~~~~~~~~inLkGi~IGNg~ 214 (483)
T d1ac5a_ 187 NAILNHNKFSKIDGDTYDLKALLIGNGW 214 (483)
T ss_dssp HHHHHHHHHCCSTTSCCEEEEEEEEEEC
T ss_pred HHHHHhccccccCCCcccceeeeecCCc
Confidence 642 1258898888874
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=96.20 E-value=0.0065 Score=58.50 Aligned_cols=108 Identities=12% Similarity=0.061 Sum_probs=64.0
Q ss_pred CCCCcEEEecCCCC---ChhcHHHHHHh-hc-CCceEEEEcCC----CCCCCCCCCCCCCCCCCCCchhhhhccccCCCC
Q 013006 157 VNSPPVLFLPGFGV---GSFHYEKQLKD-LG-KDYRAWAIDFL----GQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDK 227 (451)
Q Consensus 157 ~~~p~VlllHG~~~---~~~~~~~~~~~-L~-~~~~Vi~~D~r----G~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~ 227 (451)
.+.|++|+|||.+. +...+...... +. .+.-|+.+++| |+=.........+ +
T Consensus 94 ~~lPV~v~ihGG~~~~g~~~~~~~~~~~~~~~~~vVvV~~nYRlg~~GFl~~~~~~~~~~---------g---------- 154 (483)
T d1qe3a_ 94 QNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYS---------D---------- 154 (483)
T ss_dssp CSEEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTSC---------S----------
T ss_pred CCCceEEEEeecccccCCccccccccccccccCceEEEeecccccchhhccccccccccc---------c----------
Confidence 35699999999752 22222211122 22 36888999998 4422111111000 0
Q ss_pred CCccccccccCHHHHHHHHH---HHHHHhCC--CCEEEEEeCcchHHHHHHHHhC--CCccceEEEeccCC
Q 013006 228 AQPWASELAYSVDLWQDQVC---YFIKEVIR--EPVYVVGNSLGGFVAVYFAACN--PHLVKGVTLLNATP 291 (451)
Q Consensus 228 ~~~~~~~~~~s~~~~a~dv~---~ll~~l~~--~~v~lvGhS~GG~val~~A~~~--P~~v~~lvl~~~~~ 291 (451)
.+.+.|+...++ +-|+..|. ++|.|+|||-||..+..+.... ...+.++|+.++.+
T Consensus 155 --------N~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~ 217 (483)
T d1qe3a_ 155 --------NLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGAS 217 (483)
T ss_dssp --------CHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCC
T ss_pred --------ccccHHHHHHHHHHHHHHHHcCCCcccceeeccccccchhhhhhcccccCCcceeeccccCCc
Confidence 145556555444 33444454 5799999999999887766532 35899999999864
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.00 E-value=0.0089 Score=58.19 Aligned_cols=120 Identities=11% Similarity=0.067 Sum_probs=69.8
Q ss_pred CCeEEEEeecC--CCCCCCCcEEEecCCCC---ChhcHHHHHHhhcCCceEEEEcCC----CCCCCCCCCCCCCCCCCCC
Q 013006 143 PKFNVHYEKAG--CENVNSPPVLFLPGFGV---GSFHYEKQLKDLGKDYRAWAIDFL----GQGMSLPDEDPTPRSKEGD 213 (451)
Q Consensus 143 ~g~~l~y~~~g--~~~~~~p~VlllHG~~~---~~~~~~~~~~~L~~~~~Vi~~D~r----G~G~S~~~~~~~~~~~~~~ 213 (451)
|=+.|....-. ..+.+.|++|+|||.+. +...+........++.=|+.+++| |+-.+.....+
T Consensus 95 DCL~LnI~~P~~~~~~~~lPV~v~ihGG~~~~gs~~~~~~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~~~-------- 166 (532)
T d2h7ca1 95 DCLYLNIYTPADLTKKNRLPVMVWIHGGGLMVGAASTYDGLALAAHENVVVVTIQYRLGIWGFFSTGDEHSR-------- 166 (532)
T ss_dssp CCCEEEEEECSCTTSCCCEEEEEEECCSTTTSCCSTTSCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTTCC--------
T ss_pred cCCEEEEEECCCCCCCCCcEEEEEEeCCcccccccccCCchhhhhcCceEEEEEeeccCCCccccccccccc--------
Confidence 33555555432 22233589999999743 233333221112346888999998 33222111110
Q ss_pred chhhhhccccCCCCCCccccccccCHHHHHHHHH---HHHHHhCC--CCEEEEEeCcchHHHHHHHHh--CCCccceEEE
Q 013006 214 STEEKNFLWGFGDKAQPWASELAYSVDLWQDQVC---YFIKEVIR--EPVYVVGNSLGGFVAVYFAAC--NPHLVKGVTL 286 (451)
Q Consensus 214 ~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~---~ll~~l~~--~~v~lvGhS~GG~val~~A~~--~P~~v~~lvl 286 (451)
+ .+.+.|+...++ +-|...|. ++|.|+|+|-||..+..+... ...++.++|+
T Consensus 167 ---g------------------N~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~ 225 (532)
T d2h7ca1 167 ---G------------------NWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAIS 225 (532)
T ss_dssp ---C------------------CHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEE
T ss_pred ---c------------------ccccHHHHHHHHHHHHHHHHhcCCcceeeeeccccccchHHHHHhhhhccCcchhhhh
Confidence 0 145555554443 44444554 579999999999887766653 2358999999
Q ss_pred eccCC
Q 013006 287 LNATP 291 (451)
Q Consensus 287 ~~~~~ 291 (451)
.++.+
T Consensus 226 ~SG~~ 230 (532)
T d2h7ca1 226 ESGVA 230 (532)
T ss_dssp ESCCT
T ss_pred hcccc
Confidence 99764
|
| >d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.87 E-value=0.0081 Score=58.70 Aligned_cols=107 Identities=14% Similarity=0.092 Sum_probs=64.2
Q ss_pred CCCcEEEecCCCC---Chh--cHHHHHHhhcCCceEEEEcCC----CCCCCCCCCCCCCCCCCCCchhhhhccccCCCCC
Q 013006 158 NSPPVLFLPGFGV---GSF--HYEKQLKDLGKDYRAWAIDFL----GQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKA 228 (451)
Q Consensus 158 ~~p~VlllHG~~~---~~~--~~~~~~~~L~~~~~Vi~~D~r----G~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 228 (451)
+.|++|+|||.+. +.. .+....-...++.-|+.+++| |+-.+...... + +
T Consensus 111 ~lPV~v~ihGG~~~~gs~~~~~~~~~~~~~~~~vvvVt~nYRlg~~Gfl~~~~~~~~-~---------g----------- 169 (542)
T d2ha2a1 111 PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREA-P---------G----------- 169 (542)
T ss_dssp CEEEEEEECCSTTTCCCTTSGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCSSC-C---------S-----------
T ss_pred CCcEEEEEEECccccccCcccccCchhhhhhccceeEeeeeeccceeeecccccccC-C---------C-----------
Confidence 4599999999642 222 222221112346888999999 55332211110 0 0
Q ss_pred CccccccccCHHHHHHHHH---HHHHHhCC--CCEEEEEeCcchHHHHHHHHhC--CCccceEEEeccCCC
Q 013006 229 QPWASELAYSVDLWQDQVC---YFIKEVIR--EPVYVVGNSLGGFVAVYFAACN--PHLVKGVTLLNATPF 292 (451)
Q Consensus 229 ~~~~~~~~~s~~~~a~dv~---~ll~~l~~--~~v~lvGhS~GG~val~~A~~~--P~~v~~lvl~~~~~~ 292 (451)
.+.+.|+...++ +-|...|. ++|.|+|+|-||..+..+.... ...+.++|+.+..+.
T Consensus 170 -------N~Gl~Dq~~AL~WV~~nI~~FGGDP~~VTi~G~SAGa~sv~~ll~sp~~~~LF~~aI~~SG~~~ 233 (542)
T d2ha2a1 170 -------NVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTPN 233 (542)
T ss_dssp -------CHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCSS
T ss_pred -------cCCcccHHHHHHHHHHHHHHhhcCccccccccccccccchhhhhhhhhhhHHhhhheeeccccC
Confidence 134555554443 44444554 5799999999999888766543 258999999998643
|
| >d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=95.83 E-value=0.0081 Score=58.54 Aligned_cols=120 Identities=13% Similarity=0.085 Sum_probs=67.7
Q ss_pred eEEEEeecCCCCCCCCcEEEecCCCC---Ch--hcHHHHHHhhcCCceEEEEcCC----CCCCCCCCCCCCCCCCCCCch
Q 013006 145 FNVHYEKAGCENVNSPPVLFLPGFGV---GS--FHYEKQLKDLGKDYRAWAIDFL----GQGMSLPDEDPTPRSKEGDST 215 (451)
Q Consensus 145 ~~l~y~~~g~~~~~~p~VlllHG~~~---~~--~~~~~~~~~L~~~~~Vi~~D~r----G~G~S~~~~~~~~~~~~~~~~ 215 (451)
+.|....--....+.|++|+|||.+. +. ..+....-...++.-|+.+++| |+-........ +
T Consensus 92 L~LnI~~P~~~~~~lPV~v~ihGG~~~~g~~~~~~~~~~~~~~~~~vvvVt~nYRlg~~GFl~~~~~~~~-~-------- 162 (532)
T d1ea5a_ 92 LYLNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEA-P-------- 162 (532)
T ss_dssp CEEEEEECSSCCSSEEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCHHHHHCCCTTCSSS-C--------
T ss_pred CEEEEEeCCCCCCCCcEEEEEEcCCcccccCCccccCcchhhcccCccEEEEeeccccccccccccccCC-C--------
Confidence 44444432222235699999999642 11 1232221122346888888988 34322111110 0
Q ss_pred hhhhccccCCCCCCccccccccCHHHHHHHHH---HHHHHhCC--CCEEEEEeCcchHHHHHHHHhC--CCccceEEEec
Q 013006 216 EEKNFLWGFGDKAQPWASELAYSVDLWQDQVC---YFIKEVIR--EPVYVVGNSLGGFVAVYFAACN--PHLVKGVTLLN 288 (451)
Q Consensus 216 ~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~---~ll~~l~~--~~v~lvGhS~GG~val~~A~~~--P~~v~~lvl~~ 288 (451)
+ .+-+.|+...++ +=|+..|. ++|.|+|+|-||..+..+.... ..++.++|+.+
T Consensus 163 -g------------------N~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lF~~aI~~S 223 (532)
T d1ea5a_ 163 -G------------------NVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQS 223 (532)
T ss_dssp -S------------------CHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEES
T ss_pred -C------------------cccchhHHHHHHHHHHHHHhhcCCccceEeeeecccccchhhhccCccchhhhhhheeec
Confidence 0 145555554444 33444554 5799999999998877665532 25799999999
Q ss_pred cCCC
Q 013006 289 ATPF 292 (451)
Q Consensus 289 ~~~~ 292 (451)
..+.
T Consensus 224 g~~~ 227 (532)
T d1ea5a_ 224 GSPN 227 (532)
T ss_dssp CCTT
T ss_pred cccc
Confidence 7653
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=95.68 E-value=0.0069 Score=59.32 Aligned_cols=108 Identities=14% Similarity=0.142 Sum_probs=63.0
Q ss_pred CCCCcEEEecCCCCC---hhcH--HHHH-Hhh--cCCceEEEEcCC----CCCCCCCCCCCCCCCCCCCchhhhhccccC
Q 013006 157 VNSPPVLFLPGFGVG---SFHY--EKQL-KDL--GKDYRAWAIDFL----GQGMSLPDEDPTPRSKEGDSTEEKNFLWGF 224 (451)
Q Consensus 157 ~~~p~VlllHG~~~~---~~~~--~~~~-~~L--~~~~~Vi~~D~r----G~G~S~~~~~~~~~~~~~~~~~~~~~~w~~ 224 (451)
++.|++|+|||.+.. ...+ ..+. ..| ..+.-|+.+++| |+-.........+
T Consensus 120 ~~lPV~V~ihGG~f~~G~~~~~~~~~~~~~~~~~~~~vIvVt~nYRlg~~Gfl~~~~~~~~~~----------------- 182 (544)
T d1thga_ 120 AKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEGN----------------- 182 (544)
T ss_dssp CCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTC-----------------
T ss_pred CCCCEEEEeccCCCccCCCccCCcchhhhhhhhccCCeEEEecccccccccccCCchhhcccc-----------------
Confidence 356999999997533 2222 2222 223 346888999998 3332210000000
Q ss_pred CCCCCccccccccCHHHHHHHHHHH---HHHhCC--CCEEEEEeCcchHHHHHHHHhC--------CCccceEEEeccCC
Q 013006 225 GDKAQPWASELAYSVDLWQDQVCYF---IKEVIR--EPVYVVGNSLGGFVAVYFAACN--------PHLVKGVTLLNATP 291 (451)
Q Consensus 225 ~~~~~~~~~~~~~s~~~~a~dv~~l---l~~l~~--~~v~lvGhS~GG~val~~A~~~--------P~~v~~lvl~~~~~ 291 (451)
..+.+.|+...++=+ |+..|. ++|.|+|+|-||..+..+.... ..++.++|+.++.+
T Consensus 183 ----------gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~sp~~~~~~~s~gLF~raI~qSG~~ 252 (544)
T d1thga_ 183 ----------TNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp ----------TTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred ----------ccHHHHHhhhhhhhhhhhhcccccCCCceEeeeeccchHHHHHHHhCcCCCcccchhhhhcccccccccc
Confidence 014555555555433 344454 5799999999997666554421 24899999999864
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.60 E-value=0.016 Score=56.18 Aligned_cols=120 Identities=13% Similarity=0.050 Sum_probs=67.3
Q ss_pred eEEEEeecCCCCCCCCcEEEecCCCCC---hhc--HHHHHHhhcCCceEEEEcCC----CCCCCCCCCCCCCCCCCCCch
Q 013006 145 FNVHYEKAGCENVNSPPVLFLPGFGVG---SFH--YEKQLKDLGKDYRAWAIDFL----GQGMSLPDEDPTPRSKEGDST 215 (451)
Q Consensus 145 ~~l~y~~~g~~~~~~p~VlllHG~~~~---~~~--~~~~~~~L~~~~~Vi~~D~r----G~G~S~~~~~~~~~~~~~~~~ 215 (451)
+.|....-....++.|++|+|||.+.. ... +....-....+.-|+.+++| |+-........ +
T Consensus 90 L~lnI~~P~~~~~~~PV~v~ihGG~~~~gs~~~~~~~~~~~~~~~~vVvVt~nYRlg~~Gfl~~~~~~~~-~-------- 160 (526)
T d1p0ia_ 90 LYLNVWIPAPKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPEA-P-------- 160 (526)
T ss_dssp CEEEEEEESSCCSSEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCTTS-C--------
T ss_pred CEEEEEeCCCCCCCCceEEEEECCCcccccCcccccCccccccccceeEEecccccccccccCCCCcccc-c--------
Confidence 444444333333356999999987522 222 22221112346888999988 33222100000 0
Q ss_pred hhhhccccCCCCCCccccccccCHHHHHHHHH---HHHHHhCC--CCEEEEEeCcchHHHHHHHHh--CCCccceEEEec
Q 013006 216 EEKNFLWGFGDKAQPWASELAYSVDLWQDQVC---YFIKEVIR--EPVYVVGNSLGGFVAVYFAAC--NPHLVKGVTLLN 288 (451)
Q Consensus 216 ~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~---~ll~~l~~--~~v~lvGhS~GG~val~~A~~--~P~~v~~lvl~~ 288 (451)
+ .+-+.|+...++ +-|+..|. ++|.|+|+|-||..+..+... ....+.++|+.+
T Consensus 161 -g------------------N~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lf~~aI~~S 221 (526)
T d1p0ia_ 161 -G------------------NMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQS 221 (526)
T ss_dssp -S------------------CHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEES
T ss_pred -c------------------cccccchhhhhhhHHHHHHHhhcCchheeehhhccccceeeccccCCcchhhhhhhhccc
Confidence 0 145555555444 33444554 579999999999987655442 235799999998
Q ss_pred cCCC
Q 013006 289 ATPF 292 (451)
Q Consensus 289 ~~~~ 292 (451)
+...
T Consensus 222 g~~~ 225 (526)
T d1p0ia_ 222 GSFN 225 (526)
T ss_dssp CCTT
T ss_pred cccc
Confidence 7643
|
| >d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Esterase EstA species: Aspergillus niger [TaxId: 5061]
Probab=94.99 E-value=0.019 Score=55.54 Aligned_cols=122 Identities=14% Similarity=0.124 Sum_probs=66.8
Q ss_pred CCeEEEEeecC--CCCCCCCcEEEecCCC---CChhcHH--HHHHhhcCCceEEEEcCC----CCCCCCCCCCCCCCCCC
Q 013006 143 PKFNVHYEKAG--CENVNSPPVLFLPGFG---VGSFHYE--KQLKDLGKDYRAWAIDFL----GQGMSLPDEDPTPRSKE 211 (451)
Q Consensus 143 ~g~~l~y~~~g--~~~~~~p~VlllHG~~---~~~~~~~--~~~~~L~~~~~Vi~~D~r----G~G~S~~~~~~~~~~~~ 211 (451)
|=+.|....-. ..+.+.|++|++||.+ ++...+. .....-.++.-|+.+++| |+=.+.......
T Consensus 79 DCL~LnI~~P~~~~~~~~~PV~v~ihGG~~~~G~~~~~~~~~~~~~~~~~vVvVt~nYRlg~~GFl~~~~~~~~~----- 153 (517)
T d1ukca_ 79 DCLFINVFKPSTATSQSKLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNG----- 153 (517)
T ss_dssp CCCEEEEEEETTCCTTCCEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHSS-----
T ss_pred cCCEEEEEeCCCCCCCCCceEEEEEcCCccccCCCccccchhhhhhhccccceEEEEecccceeecCcccccccc-----
Confidence 33555555422 1222348999999974 2222332 222222334678899988 332221000000
Q ss_pred CCchhhhhccccCCCCCCccccccccCHHHHHHHHH---HHHHHhCC--CCEEEEEeCcchHHHHHHHHh----CCCccc
Q 013006 212 GDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVC---YFIKEVIR--EPVYVVGNSLGGFVAVYFAAC----NPHLVK 282 (451)
Q Consensus 212 ~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~---~ll~~l~~--~~v~lvGhS~GG~val~~A~~----~P~~v~ 282 (451)
...+.+.|+...++ +=|+..|. ++|.|+|+|-||..+...... ...++.
T Consensus 154 ----------------------~~N~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s~~~~~~gLF~ 211 (517)
T d1ukca_ 154 ----------------------DLNAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFI 211 (517)
T ss_dssp ----------------------CTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCS
T ss_pred ----------------------ccchhHHHHHHHHHHHHHHHHhhcCCcccccccccccchhhHHHHHhccccccccccc
Confidence 00145555555444 33444454 579999999999877654432 224899
Q ss_pred eEEEeccCC
Q 013006 283 GVTLLNATP 291 (451)
Q Consensus 283 ~lvl~~~~~ 291 (451)
++|+.++..
T Consensus 212 raI~qSg~~ 220 (517)
T d1ukca_ 212 GAIVESSFW 220 (517)
T ss_dssp EEEEESCCC
T ss_pred eeeeccccc
Confidence 999999754
|
| >d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=94.95 E-value=0.016 Score=56.34 Aligned_cols=121 Identities=12% Similarity=0.090 Sum_probs=66.7
Q ss_pred CeEEEEeecC--CCCCCCCcEEEecCCCC---ChhcH--HHHHH-hh--cCCceEEEEcCC----CCCCCCCCCCCCCCC
Q 013006 144 KFNVHYEKAG--CENVNSPPVLFLPGFGV---GSFHY--EKQLK-DL--GKDYRAWAIDFL----GQGMSLPDEDPTPRS 209 (451)
Q Consensus 144 g~~l~y~~~g--~~~~~~p~VlllHG~~~---~~~~~--~~~~~-~L--~~~~~Vi~~D~r----G~G~S~~~~~~~~~~ 209 (451)
=+.|....-. ..+.+.|++|+|||.+. +...| ..+.. .+ .++.=|+.+++| |+-.........+
T Consensus 97 CL~LnI~~P~~~~~~~~~PVlv~ihGG~f~~g~~~~~~~~~~~~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~~~~~-- 174 (534)
T d1llfa_ 97 CLTINVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGS-- 174 (534)
T ss_dssp CCEEEEEECTTCCTTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTC--
T ss_pred CCEEEEEECCCCCCCCCCeEEEEECCCccccCCCCCCCchhccchhhhccCCeEEEEeecCCCcccccCCcccccccc--
Confidence 3555555421 22345699999999763 23223 22322 22 356888999999 3322110000000
Q ss_pred CCCCchhhhhccccCCCCCCccccccccCHHHHHHHHH---HHHHHhCC--CCEEEEEeCcchHHHH-HHHHhC----C-
Q 013006 210 KEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVC---YFIKEVIR--EPVYVVGNSLGGFVAV-YFAACN----P- 278 (451)
Q Consensus 210 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~---~ll~~l~~--~~v~lvGhS~GG~val-~~A~~~----P- 278 (451)
+ .+.+.|+...++ +=|...|. ++|.|+|+|-||..+. .++... |
T Consensus 175 -------g------------------N~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~~~~~~~sp~ 229 (534)
T d1llfa_ 175 -------G------------------NAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYK 229 (534)
T ss_dssp -------T------------------THHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEET
T ss_pred -------c------------------ccchhHHHHHHHHHHhhhhhhccCCcceeeeeecchHHHHHHHHhccccccccc
Confidence 0 144555554443 33444454 5799999999998654 444321 1
Q ss_pred --CccceEEEeccCC
Q 013006 279 --HLVKGVTLLNATP 291 (451)
Q Consensus 279 --~~v~~lvl~~~~~ 291 (451)
.++.++|+.++..
T Consensus 230 s~gLF~raI~qSGs~ 244 (534)
T d1llfa_ 230 GKPLFRAGIMQSGAM 244 (534)
T ss_dssp TEESCSEEEEESCCS
T ss_pred hhhhhhhhhhccCcc
Confidence 2599999999753
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=94.66 E-value=0.016 Score=50.85 Aligned_cols=34 Identities=29% Similarity=0.217 Sum_probs=25.2
Q ss_pred HHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHh
Q 013006 243 QDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 243 a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~ 276 (451)
...+..++++....++++.|||+||.+|..+|..
T Consensus 119 ~~~i~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 152 (265)
T d3tgla_ 119 VATVLDQFKQYPSYKVAVTGHSLGGATVLLCALD 152 (265)
T ss_dssp HHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCceEEEecccchHHHHHHHHHH
Confidence 3444445555566789999999999999987764
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=94.56 E-value=0.017 Score=50.60 Aligned_cols=32 Identities=28% Similarity=0.179 Sum_probs=23.6
Q ss_pred HHHHHHHHhCCCCEEEEEeCcchHHHHHHHHh
Q 013006 245 QVCYFIKEVIREPVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 245 dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~ 276 (451)
.+..+++.....++++.|||+||.+|..+|..
T Consensus 122 ~v~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 153 (265)
T d1lgya_ 122 VVQEQLTAHPTYKVIVTGHSLGGAQALLAGMD 153 (265)
T ss_dssp HHHHHHHHCTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHhhCCCceEEEEecccchHHHHHHHHH
Confidence 34444444455789999999999999888764
|
| >d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Bile-salt activated lipase (cholesterol esterase) species: Cow (Bos taurus) [TaxId: 9913]
Probab=94.54 E-value=0.027 Score=55.38 Aligned_cols=55 Identities=16% Similarity=0.186 Sum_probs=38.6
Q ss_pred cCHHHHHHHHHHH---HHHhCC--CCEEEEEeCcchHHHHHHHHh--CCCccceEEEeccCC
Q 013006 237 YSVDLWQDQVCYF---IKEVIR--EPVYVVGNSLGGFVAVYFAAC--NPHLVKGVTLLNATP 291 (451)
Q Consensus 237 ~s~~~~a~dv~~l---l~~l~~--~~v~lvGhS~GG~val~~A~~--~P~~v~~lvl~~~~~ 291 (451)
+-+.|+...++=+ |...|. ++|.|+|||-||..+..+... ....++++|+.++.+
T Consensus 162 ~Gl~Dq~~AL~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~ 223 (579)
T d2bcea_ 162 YGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVG 223 (579)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCT
T ss_pred chhhHHHHHHHHHhhhhhhhccCcCceEeeecccccchhhhhhhhhcccCccccceeccCCc
Confidence 4566666555443 344454 579999999999887765543 345899999999764
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=94.45 E-value=0.02 Score=50.14 Aligned_cols=35 Identities=26% Similarity=0.143 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHh
Q 013006 242 WQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 242 ~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~ 276 (451)
+.+.+..+++.....++++.|||+||.+|..+|..
T Consensus 111 i~~~i~~~~~~~~~~~i~vTGHSLGGAlA~L~a~~ 145 (261)
T d1uwca_ 111 VESLVKQQASQYPDYALTVTGHSLGASMAALTAAQ 145 (261)
T ss_dssp HHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCcceEEeccchhHHHHHHHHHH
Confidence 33344444444455689999999999999887764
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=94.37 E-value=0.025 Score=49.66 Aligned_cols=35 Identities=29% Similarity=0.261 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHh
Q 013006 242 WQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 242 ~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~ 276 (451)
+.+.+..+++.....++++.|||+||.+|..++..
T Consensus 124 v~~~v~~~~~~~~~~~i~vtGHSLGGalA~l~a~~ 158 (269)
T d1tiba_ 124 LRQKVEDAVREHPDYRVVFTGHSLGGALATVAGAD 158 (269)
T ss_dssp HHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcceeeeccchHHHHHHHHHHH
Confidence 33344444444455689999999999999988875
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=94.37 E-value=0.017 Score=50.89 Aligned_cols=33 Identities=27% Similarity=0.253 Sum_probs=24.1
Q ss_pred HHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHh
Q 013006 244 DQVCYFIKEVIREPVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 244 ~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~ 276 (451)
+.+..+++.....++++.|||+||.+|..+|..
T Consensus 125 ~~i~~~~~~~~~~~i~iTGHSLGGAlA~L~a~~ 157 (271)
T d1tiaa_ 125 KELKEVVAQNPNYELVVVGHSLGAAVATLAATD 157 (271)
T ss_pred HHHHHHHHhCCCceEEEeccchHHHHHHHHHHH
Confidence 333444444455689999999999999988775
|
| >d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=92.19 E-value=0.11 Score=50.55 Aligned_cols=55 Identities=15% Similarity=-0.102 Sum_probs=37.2
Q ss_pred cCHHHHHHHHH---HHHHHhCC--CCEEEEEeCcchHHHHHHHHhC--CCccceEEEeccCC
Q 013006 237 YSVDLWQDQVC---YFIKEVIR--EPVYVVGNSLGGFVAVYFAACN--PHLVKGVTLLNATP 291 (451)
Q Consensus 237 ~s~~~~a~dv~---~ll~~l~~--~~v~lvGhS~GG~val~~A~~~--P~~v~~lvl~~~~~ 291 (451)
+-+.|+...++ +-|+..|. ++|.|+|+|-||..+..+.... ...+.++|+.+...
T Consensus 204 ~Gl~Dq~~AL~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~ll~sp~~~~lf~~aI~~Sg~~ 265 (571)
T d1dx4a_ 204 VGLWDQALAIRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 265 (571)
T ss_dssp HHHHHHHHHHHHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred ccchHHHHHHHHHHHhhhhhccCCCceEeccccCccceeeeeeccccccccccccceecccc
Confidence 45555555444 33344454 5799999999999887665542 35799999998754
|
| >d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Cutinase species: Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]
Probab=90.61 E-value=0.26 Score=40.57 Aligned_cols=51 Identities=12% Similarity=-0.016 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCC----CccceEEEecc
Q 013006 239 VDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNP----HLVKGVTLLNA 289 (451)
Q Consensus 239 ~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P----~~v~~lvl~~~ 289 (451)
...+.+.+..+.++-...+++|+|+|.|+.++-.++...+ ++|.++++++-
T Consensus 79 ~~~~~~~i~~~a~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGD 133 (197)
T d1cexa_ 79 IREMLGLFQQANTKCPDATLIAGGYSQGAALAAASIEDLDSAIRDKIAGTVLFGY 133 (197)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESC
T ss_pred HHHHHHHHHHHHhhCCCCeEEEeeeccccHhhhcccccCChhhhhhEEEEEEEeC
Confidence 4455556655555556679999999999999988887653 58999999985
|
| >d1qoza_ c.69.1.30 (A:) Acetylxylan esterase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Trichoderma reesei [TaxId: 51453]
Probab=82.26 E-value=0.65 Score=38.39 Aligned_cols=48 Identities=15% Similarity=0.104 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhC------------------CCccceEEEecc
Q 013006 242 WQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACN------------------PHLVKGVTLLNA 289 (451)
Q Consensus 242 ~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~------------------P~~v~~lvl~~~ 289 (451)
+.+.|....++-...+++|+|+|.|+.++-.++... .++|.++++++-
T Consensus 68 ~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~l~~~g~~~~~~~~~~~~l~~~~~~~V~avvl~Gd 133 (207)
T d1qoza_ 68 AAAAINNFHNSCPDTQLVLVGYSQGAQIFDNALCGGGDPGEGITNTAVPLTAGAVSAVKAAIFMGD 133 (207)
T ss_dssp HHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESC
T ss_pred HHHHHHHHHHhCCCCeEEEEeeccchHHHHHHHhccCccccccccCCCCCChhhhhcEEEEEEEeC
Confidence 333343333443457999999999999998876421 136888999874
|