Citrus Sinensis ID: 013012


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-
MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEVATVPEDVGTAGALRAIAHHLTAKDVLVVSGDLVSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLDQKDKFQSLKQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALGPNGSAPVRRTHKCCVYIASNSKYCVRLNSIQAFMDINRDVIGEANHLSGYNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQGSVICSNAQLQERVALKDCQVLSLSTSVFLSLSSNEYL
ccEEEEEEEccccccccccccccccccccccccccHHHHHHHHHHHccccEEEEEccccHHHHHHHHcccccccccEEEEEECcccccccHHHHHHHHHHcccccEEEEcccccccccHHHHHHHHHHcccccEEEEEEECcccccccccccccccccccccccEEEEcccccEEEEEEccccccccccccHHHHccccEEEEccccccEEEEEEcHHHHHHHHHcccccccccccHHHHHHHHHcccccHHccccccccccccccccHHHHHHHccccccccccccccccccccccccccEEEEEcccccEEEEcccHHHHHHHcHHHcccccccccccccccccEEccccEEccccEEccccEEccccEEccccEEcccEEccccEEccccEEEccEEccccEEccccEEEccEEccccEEccccEEcccEEEcccEEEcccccccccc
MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEVATVPEDVGTAGALRAIAHHLTAKDVLVVSGDLVSDVPPGAVTAAHRRHDAVVTAMICSVPV****************KPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLDQKDKFQSLKQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALGPNGSAPVRRTHKCCVYIASNSKYCVRLNSIQAFMDINRDVIGEANHLSGYNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQGSVICSNAQLQERVALKDCQVLSLSTSVFLSLSSNE*L
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MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEVATVPEDVGTAGALRAIAHHLTAKDVLVVSGDLVSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLDQKDKFQSLKQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALGPNGSAPVRRTHKCCVYIASNSKYCVRLNSIQAFMDINRDVIGEANHLSGYNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQGSVICSNAQLQERVALKDCQVLSLSTSVFLSLSSNEYL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Translation initiation factor eIF-2B subunit gamma Catalyzes the exchange of eukaryotic initiation factor 2-bound GDP for GTP.probableP70541
Translation initiation factor eIF-2B subunit gamma Catalyzes the exchange of eukaryotic initiation factor 2-bound GDP for GTP.probableA5PJI7
Translation initiation factor eIF-2B subunit gamma Catalyzes the exchange of eukaryotic initiation factor 2-bound GDP for GTP.probableQ9NR50

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3ST8, chain A
Confidence level:very confident
Coverage over the Query: 3-141,159-270,309-448
View the alignment between query and template
View the model in PyMOL
Template: 1YP2, chain A
Confidence level:very confident
Coverage over the Query: 2-143,159-245,300-444
View the alignment between query and template
View the model in PyMOL