Citrus Sinensis ID: 013027

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-
Protein Sequence
MEGHGVVGFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYFFNAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERGKKIGLKKNLVFHEGRVPNGIRTKWVMHEYHSLNASSYPKEFVLFRLKKKSGAKPDARNEPTPQDLAFDSGNRAIENTNPQINRGLPEEWQLFLSDTELDYNLLADSNGFHDNTFSELPPNIQPERGTSINSSVFDRILQPMVQPERGTSINSSVFDRILQPMVQPEHGTSYSDGFNNEPSFLNDSCLETSEQEEAFVNSLWADQGECFGERSMNTLRHDFNPTISLRGGRSIGQSSDADSKIYQQHGKVPGTSNVFYEKTHAQMETVWALSETSSSSEGYGIMDFDVSSVNSDTDLPGIVGHESVVDELQHTPKYHKYFEARCSTQELKTQRKVSDKAVSKVEVSMLK
Secondary Structure (PSIPRED)
ccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccccccccEEcccccEEEEEEccEEcccccccccccccEEEEEEccccccccccEEEEEEEEcccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccEEEEEEEcccHHHHHHHHccccccEEEEEccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccHHHHHHHHHHHHHccccccccEHHHHHHHHccccccccHHccccccccEEEEEccccccccccccccccccccEEEEccccccEEcccccEEEEEEEEEEEcccccccccccEEEEEEEccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccHHHcccccccccccccccHcccccccccccccccccccccccccHHHHHHHccccccccccEccccHHcHHHHHcccccccccccccccccEEccccccccccccEEEccHHHHHccccccEEEEEEEEcccEEEEEccccHHHccEEEEEccc
Coil and Loop (DISEMBL)
meghgvvgfrfhptDEEIVTYFLERkmcgldfpahtiadvvdvckyepwelpqrssmpkedrvwyffnapvpkyanskrinrttnsgfwkstckdREIWDERgkkiglkknlvfhegrvpngirTKWVMHEYhslnassypkEFVLFRLKkksgakpdarneptpqdlafdsgnraientnpqinrglpeewqlflsdteldynlladsngfhdntfselppniqpergtsinssvfdrilqpmvqpergtsinssvfdrilqpmvqpehgtsysdgfnnepsflndscletsEQEEAFVNSLWAdqgecfgersmntlrhdfnptislrggrsigqssdadskiyqqhgkvpgtsnvfyEKTHAQMETVWALSetssssegygimdfdvssvnsdtdlpgivghesvvdelqhtpkyhKYFEARCSTQELKTQRKVSDKAVSKVEVSMLK
Flexible Loop (DISEMBL)
meghgvvgfrfhptdEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWElpqrssmpkedRVWYFFNApvpkyanskrinrttnsgfwkstckdreIWDErgkkiglkknlvfhegrvpngiRTKWVMHEYHSLNASSYPKEFVLFRLKKksgakpdarneptpqdlafdsgNRAIENtnpqinrglpEEWQLFLSDTELDYNLLADSNGFHDNTFSELPPNIQPERGTSINSSVFDRILQPMVQPERGTSINSSVFDRILQPMVQPEHGTSYSDGFNNEPSFLNDSCLETSEQEEAFVNSLWADQGECFGERSMNTLRHDFNPTISLRGGRSIGQSSDADSKIYQQHGKVPGTSNVFYEKTHAQMETVWALSETSSSSEGYGIMDFDVSSVNSDTDLPGIVGHESVVDELQHTPKYHKYFEArcstqelktqrkvsdkavskvevsmlk
Low Complexity Region (SEG)
MEGHGVVGFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYFFNAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERGKKIGLKKNLVFHEGRVPNGIRTKWVMHEYHSLNASSYPKEFVLFRLKKKSGAKPDARNEPTPQDLAFDSGNRAIENTNPQINRGLPEEWQLFLSDTELDYNLLADSNGFHDNTFSELPPNIQPERGTSINSSVFDRILQPMVQPERGTSINSSVFDRILQPMVQPEHGTSYSDGFNNEPSFLNDSCLETSEQEEAFVNSLWADQGECFGERSMNTLRHDFNPTISLRGGRSIGQSSDADSKIYQQHGKVPGTSNVFYEKTHAQMETVWALSETSSSSEGYGIMDFDVSSVNSDTDLPGIVGHESVVDELQHTPKYHKYFEARCSTQELKTQRKVSDKAVSKVEVSMLK
Disordered region (IsUnstruct)
*****VVGFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELP*******EDRVWYFFNAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERGKKIGLKKNLVFHEGRVPNGIRTKWVMHEYHSLNASSYPKEFVLFRL**************************************LPEEWQLFLSDTELDYNLLADSNGFH************************************************************************************AFVNSLWADQGECFGERSMNTL************************************SNVFYEKTHAQMETVWAL*********YGIMDFDVSSVNSDTDLPGIVGHESVVDELQHTPKYHKYFEARC*************************
Disordered Region (DISOPRED)
**GHGVVGFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYFFNAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERGKKIGLKKNLVFHEGRVPNGIRTKWVMHEYHSLNASSYPKEFVLFRLKK**************************************************************************************************************************************************AFVNSLWAD******************************************************************************************T******************PKYHKYFEARCST***************KVEVSML*
Disordered Region (DISEMBL)
MEGHGVVGFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYFFNAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERGKKIGLKKNLVFHEGRVPNGIRTKWVMHEYHSLNASSYPKEFVLFRLKK************TPQDLAFDSGNRAIENTNPQINRGLPEEWQLFLSDTELDYNLLADSNGFHDNTFSELPPNIQPERGTSINSSVFDRILQPMVQPERGTSINSSVFDRILQPMVQPEHGTSYSDGFNNEPSFLNDSCLETSEQEEAFVNSLWADQGECFGERSMNTLRHDFNPTISLRGGRSIGQSSDADSKIYQQHGKVPGTSNVFYEKTHAQMETVW********SEGYGIMDFDVSSVNSDTDLPGIVGHESVVDELQHTPKYHKYFEARCST***********************
Disordered Region (DISPRO)
****GVVGFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYFFNAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERGKKIGLKKNLVFHEGRVPNGIRTKWVMHEYHSLNASSYPKEFVLFRLKKKSG***********************************************************************************D**LQPMVQPERGTSINSSVFDRILQPMVQPEHGTSYSDGFNNEPSFLNDSCLE****EEA**NSLWADQGEC*G**S***LRHDFNPTISLRGGRSIGQSSDADSKIYQQHGKVPGTSNVFYEKTHAQMETVWALSET****E*YGIMDFDVSSVNSDTDLPGIVGHESVVDELQHTPKYHKYFEARCSTQELKTQRKVSDKAVSKVEVS*L*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEGHGVVGFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYFFNAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERGKKIGLKKNLVFHEGRVPNGIRTKWVMHEYHSLNASSYPKEFVLFRLKKKSGAKPDARNEPTPQDLAFDSGNRAIENTNPQINRGLPEEWQLFLSDTELDYNLLADSNGFHDNTFSELPPNIQPERGTSINSSVFDRILQPMVQPERGTSINSSVFDRILQPMVQPEHGTSYSDGFNNEPSFLNDSCLETSEQEEAFVNSLWADQGECFGERSMNTLRHDFNPTISLRGGRSIGQSSDADSKIYQQHGKVPGTSNVFYEKTHAQMETVWALSETSSSSEGYGIMDFDVSSVNSDTDLPGIVGHESVVDELQHTPKYHKYFEARCSTQELKTQRKVSDKAVSKVEVSMLK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	451	2.2.26 [Sep-21-2011]
Q84K00	567	NAC domain-containing pro	yes	no	0.328	0.261	0.483	7e-36
Q9FLJ2	336	NAC domain-containing pro	no	no	0.317	0.425	0.461	2e-30
Q7GCL7	489	NAC domain-containing pro	no	no	0.337	0.310	0.434	2e-30
Q9M126	457	NAC domain-containing pro	no	no	0.392	0.387	0.370	5e-30
Q9FRV4	310	Protein CUP-SHAPED COTYLE	no	no	0.321	0.467	0.448	8e-30
Q9S851	334	Protein CUP-SHAPED COTYLE	no	no	0.330	0.446	0.420	2e-29
A2YMR0	425	NAC transcription factor	N/A	no	0.286	0.303	0.440	3e-29
O04017	375	Protein CUP-SHAPED COTYLE	no	no	0.288	0.346	0.477	6e-29
Q8H4S4	425	NAC transcription factor	no	no	0.286	0.303	0.432	7e-29
A0SPJ8	406	NAC transcription factor	N/A	no	0.286	0.317	0.441	7e-29

>sp|Q84K00|NAC78_ARATH NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2

 Score =  152 bits (383), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 75/155 (48%), Positives = 100/155 (64%), Gaps = 7/155 (4%)

Query: 8   GFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYFF 67
           GFRFHPTDEE+V Y+L+RK+C   F    I+ V D+ K EPW+LP +S +   D  WYFF
Sbjct: 12  GFRFHPTDEELVRYYLKRKVCNKPFKFDAIS-VTDIYKSEPWDLPDKSKLKSRDLEWYFF 70

Query: 68  NAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERGKKIGLKKNLVFHEGRVPNGIRTKW 127
           +    KY+N  + NR T  G+WK+T KDREI +   + +G+KK LV+H+GR P G RT W
Sbjct: 71  SMLDKKYSNGSKTNRATEKGYWKTTGKDREIRN-GSRVVGMKKTLVYHKGRAPRGERTNW 129

Query: 128 VMHEYH----SLNASSYPKE-FVLFRLKKKSGAKP 157
           VMHEY      L  +  P+E +VL R+ +KSG  P
Sbjct: 130 VMHEYRLSDEDLKKAGVPQEAYVLCRIFQKSGTGP 164

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FLJ2|NC100_ARATH NAC domain-containing protein 100 OS=Arabidopsis thaliana GN=NAC100 PE=2 SV=1

 Score =  134 bits (336), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 72/156 (46%), Positives = 99/156 (63%), Gaps = 13/156 (8%)

Query: 8   GFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYFF 67
           GFRFHPTDEE++T++L +K+    F A  I +V D+ K EPWELP  + M +++  WYFF
Sbjct: 19  GFRFHPTDEELITHYLHKKVLDTSFSAKAIGEV-DLNKSEPWELPWMAKMGEKE--WYFF 75

Query: 68  NAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERGKK-IGLKKNLVFHEGRVPNGIRTK 126
                KY    R NR T +G+WK+T KD+EI+  RGK  +G+KK LVF+ GR P G +T 
Sbjct: 76  CVRDRKYPTGLRTNRATEAGYWKATGKDKEIY--RGKSLVGMKKTLVFYRGRAPKGQKTN 133

Query: 127 WVMHEYH---SLNASSYPK----EFVLFRLKKKSGA 155
           WVMHEY      +A + PK    E+V+ R+ +KS  
Sbjct: 134 WVMHEYRLEGKFSAHNLPKTAKNEWVICRVFQKSAG 169

Arabidopsis thaliana (taxid: 3702)

>sp|Q7GCL7|NAC74_ORYSJ NAC domain-containing protein 74 OS=Oryza sativa subsp. japonica GN=NAC74 PE=2 SV=1

 Score =  133 bits (335), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 70/161 (43%), Positives = 97/161 (60%), Gaps = 9/161 (5%)

Query: 8   GFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYFF 67
           GF FHP D E+++++L++K+ G       I +V D+ K+EPW+LP +  +P +D  W+FF
Sbjct: 12  GFGFHPKDTELISHYLKKKIHGQKIEYEIIPEV-DIYKHEPWDLPAKCDVPTQDNKWHFF 70

Query: 68  NAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERGKK-IGLKKNLVFHEGRVPNGIRTK 126
            A   KY N  R NR T +G+WKST KDR I  + GK+ IG KK LVFHEGR P G RT+
Sbjct: 71  AARDRKYPNGSRSNRATVAGYWKSTGKDRAI--KMGKQTIGTKKTLVFHEGRPPTGRRTE 128

Query: 127 WVMHEYH-----SLNASSYPKEFVLFRLKKKSGAKPDARNE 162
           W+MHEY+               +VL R+ K++   P   NE
Sbjct: 129 WIMHEYYIDERECQACPDMKDAYVLCRITKRNDWIPGNGNE 169

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9M126|NAC69_ARATH NAC domain-containing protein 69 OS=Arabidopsis thaliana GN=NAC69 PE=2 SV=1

 Score =  132 bits (332), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 67/181 (37%), Positives = 104/181 (57%), Gaps = 4/181 (2%)

Query: 6   VVGFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWY 65
           +VG+RF+PT EE++ ++L+ K+ G  +        +++C Y+P  LP  S +  +D VWY
Sbjct: 5   LVGYRFYPTGEELINHYLKNKILGKTWLVDEAISEINICSYDPIYLPSLSKIKSDDPVWY 64

Query: 66  FFNAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERGKK--IGLKKNLVFHEGRVPNGI 123
           FF       A  K   RTT+SG+WK+T  DR+I D+RG +  IG+KK LV++EGRVP G+
Sbjct: 65  FFCPKEYTSAKKKVTKRTTSSGYWKATGVDRKIKDKRGNRGEIGIKKTLVYYEGRVPKGV 124

Query: 124 RTKWVMHEYHSLNASSYPKEFVLFRL--KKKSGAKPDARNEPTPQDLAFDSGNRAIENTN 181
            T WVMHEYH        + +V+ ++  K + G  P   N  +    +  S +  +  T+
Sbjct: 125 WTPWVMHEYHITCLPQDQRNYVICQVMYKGEDGDVPSGGNNSSEPSQSLVSDSNTVRATS 184

Query: 182 P 182
           P
Sbjct: 185 P 185

Transcription activator activated by proteolytic cleavage through regulated intramembrane proteolysis mediated by calpain or its functional homolog. Regulates cytokinin signaling during cell division.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FRV4|NAC54_ARATH Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana GN=NAC054 PE=1 SV=1

 Score =  131 bits (330), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 70/156 (44%), Positives = 99/156 (63%), Gaps = 11/156 (7%)

Query: 8   GFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYFF 67
           GFRFHPTDEE++TY+L +K+   +F    I+ V D+ K EPWELP+++ M +++  WYFF
Sbjct: 23  GFRFHPTDEELITYYLLKKVLDSNFSCAAISQV-DLNKSEPWELPEKAKMGEKE--WYFF 79

Query: 68  NAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERGKK-IGLKKNLVFHEGRVPNGIRTK 126
                KY    R NR T +G+WK+T KDREI   + K  +G+KK LVF++GR P G ++ 
Sbjct: 80  TLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAPKGEKSC 139

Query: 127 WVMHEY-------HSLNASSYPKEFVLFRLKKKSGA 155
           WVMHEY       +   +SS   E+VL ++  KSG 
Sbjct: 140 WVMHEYRLDGKFSYHYISSSAKDEWVLCKVCLKSGV 175

Transcription activator of STM and KNAT6. Involved in molecular mechanisms regulating shoot apical meristem (SAM) formation during embryogenesis and organ separation. Required for the fusion of septa of gynoecia along the length of the ovaries. Activates the shoot formation in callus in a STM-dependent manner. Seems to act as an inhibitor of cell division.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9S851|NAC31_ARATH Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=1 SV=1

 Score =  130 bits (327), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 66/157 (42%), Positives = 101/157 (64%), Gaps = 8/157 (5%)

Query: 8   GFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYFF 67
           GFRFHPTDEE++T++L  K+         I++V D+ + EPWELP+ + M   +R WYF+
Sbjct: 25  GFRFHPTDEELITFYLASKIFHGGLSGIHISEV-DLNRCEPWELPEMAKM--GEREWYFY 81

Query: 68  NAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERGKK-IGLKKNLVFHEGRVPNGIRTK 126
           +    KY    R NR T +G+WK+T KD+E++   G + +G+KK LVF++GR P G++TK
Sbjct: 82  SLRDRKYPTGLRTNRATTAGYWKATGKDKEVFSGGGGQLVGMKKTLVFYKGRAPRGLKTK 141

Query: 127 WVMHEYHSLNASSY----PKEFVLFRLKKKSGAKPDA 159
           WVMHEY   N  S+     +E+V+ R+  K+G + + 
Sbjct: 142 WVMHEYRLENDHSHRHTCKEEWVICRVFNKTGDRKNV 178

Transcription activator. Involved in molecular mechanisms regulating shoot apical meristem (SAM) formation during embryogenesis and organ separation. Required for axillary meristem initiation and separation of the meristem from the main stem. May act as an inhibitor of cell division.

Arabidopsis thaliana (taxid: 3702)

>sp|A2YMR0|NAC10_ORYSI NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica GN=ONAC010 PE=3 SV=1

 Score =  129 bits (325), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 59/134 (44%), Positives = 89/134 (66%), Gaps = 5/134 (3%)

Query: 8   GFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYFF 67
           GFRFHPTDEE+V ++L++K   +  P   IA+V D+ K++PWELP++++  +++  WYFF
Sbjct: 32  GFRFHPTDEELVVHYLKKKAASVPLPVTIIAEV-DLYKFDPWELPEKANFGEQE--WYFF 88

Query: 68  NAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERG--KKIGLKKNLVFHEGRVPNGIRT 125
           +    KY N  R NR   SG+WK+T  D+ I       +K+G+KK LVF+ G+ P G++T
Sbjct: 89  SPRDRKYPNGARPNRAATSGYWKATGTDKPIMASGSTREKVGVKKALVFYRGKPPKGVKT 148

Query: 126 KWVMHEYHSLNASS 139
            W+MHEY   + SS
Sbjct: 149 NWIMHEYRLTDTSS 162

Transcription factor of the NAC family associated with male fertility.

Oryza sativa subsp. indica (taxid: 39946)

>sp|O04017|NAC98_ARATH Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1

 Score =  129 bits (323), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 64/134 (47%), Positives = 89/134 (66%), Gaps = 4/134 (2%)

Query: 8   GFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYFF 67
           GFRFHPTDEE++T++L RK+    F +  IA+V D+ K EPW+LP R+ M +++  WYFF
Sbjct: 20  GFRFHPTDEELITHYLLRKVLDGCFSSRAIAEV-DLNKCEPWQLPGRAKMGEKE--WYFF 76

Query: 68  NAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERG-KKIGLKKNLVFHEGRVPNGIRTK 126
           +    KY    R NR T +G+WK+T KDREI+  +    +G+KK LVF++GR P G ++ 
Sbjct: 77  SLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKGEKSN 136

Query: 127 WVMHEYHSLNASSY 140
           WVMHEY      SY
Sbjct: 137 WVMHEYRLEGKFSY 150

Transcription activator of STM and KNAT6. Involved in molecular mechanisms regulating shoot apical meristem (SAM) formation during embryogenesis and organ separation. Required for the fusion of septa of gynoecia along the length of the ovaries. Activates the shoot formation in callus in a STM-dependent manner. Controls leaf margin development and required for leaf serration. Involved in axillary meristem initiation and separation of the meristem from the main stem. Regulates the phyllotaxy throughout the plant development. Seems to act as an inhibitor of cell division.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8H4S4|NAC10_ORYSJ NAC transcription factor ONAC010 OS=Oryza sativa subsp. japonica GN=ONAC010 PE=2 SV=1

 Score =  128 bits (322), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 58/134 (43%), Positives = 89/134 (66%), Gaps = 5/134 (3%)

Query: 8   GFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYFF 67
           GFRFHPTDEE+V ++L++K   +  P   IA+V D+ K++PW+LP++++  +++  WYFF
Sbjct: 32  GFRFHPTDEELVVHYLKKKAASVPLPVTIIAEV-DLYKFDPWDLPEKANFGEQE--WYFF 88

Query: 68  NAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERG--KKIGLKKNLVFHEGRVPNGIRT 125
           +    KY N  R NR   SG+WK+T  D+ I       +K+G+KK LVF+ G+ P G++T
Sbjct: 89  SPRDRKYPNGARPNRAATSGYWKATGTDKPIMSSGSTREKVGVKKALVFYRGKPPKGVKT 148

Query: 126 KWVMHEYHSLNASS 139
            W+MHEY   + SS
Sbjct: 149 NWIMHEYRLTDTSS 162

Transcription factor of the NAC family associated with male fertility. Involved in anther development, but not in senescence. Reduced expression of NAC5 via RNAi leads to male-sterility.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A0SPJ8|NAM1_HORVD NAC transcription factor NAM-1 OS=Hordeum vulgare var. distichum GN=NAM-1 PE=4 SV=1

 Score =  128 bits (322), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 60/136 (44%), Positives = 88/136 (64%), Gaps = 7/136 (5%)

Query: 8   GFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYFF 67
           GFRFHPTDEE+V ++L++K      P   IA+V D+ K++PWELP++++  + +  WYFF
Sbjct: 38  GFRFHPTDEELVVHYLKKKAAKAPLPVTIIAEV-DLYKFDPWELPEKATFGEHE--WYFF 94

Query: 68  NAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERG----KKIGLKKNLVFHEGRVPNGI 123
           +    KYAN  R NR   SG+WK+T  D+ I         +K+G+KK LVF+ G+ P G+
Sbjct: 95  SPRDRKYANGARPNRAATSGYWKATGTDKPILASATGCGREKVGVKKALVFYRGKPPRGL 154

Query: 124 RTKWVMHEYHSLNASS 139
           +T W+MHEY    AS+
Sbjct: 155 KTNWIMHEYRLTGASA 170

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. Sequences of 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare var. distichum (taxid: 112509)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	451
356560207	1061	PREDICTED: uncharacterized protein LOC10	0.374	0.159	0.474	1e-37
356522462	497	PREDICTED: NAC domain-containing protein	0.374	0.340	0.457	2e-37
224063973	208	NAC domain protein, IPR003441 [Populus t	0.410	0.889	0.445	2e-36
359486687	559	PREDICTED: NAC domain-containing protein	0.328	0.264	0.483	3e-35
147802301	573	hypothetical protein VITISV_021988 [Viti	0.328	0.258	0.483	3e-35
225453680	560	PREDICTED: uncharacterized protein LOC10	0.727	0.585	0.321	1e-34
357451351	346	NAC domain protein [Medicago truncatula]	0.339	0.442	0.472	2e-34
297829590	560	ANAC053 [Arabidopsis lyrata subsp. lyrat	0.328	0.264	0.483	2e-34
293336942	665	uncharacterized protein LOC100382324 [Ze	0.325	0.221	0.5	3e-34
297806417	568	hypothetical protein ARALYDRAFT_908325 [	0.328	0.260	0.483	3e-34

>gi|356560207|ref|XP_003548385.1| PREDICTED: uncharacterized protein LOC100778755 [Glycine max]

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 83/175 (47%), Positives = 111/175 (63%), Gaps = 6/175 (3%)

Query: 4   HGVVGFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRV 63
           H  VGFRF PTDEE+V Y+L+ K+   DFP H I ++ D+CK EPW++P RS +  +D  
Sbjct: 10  HMPVGFRFRPTDEELVDYYLKHKLLADDFPVHIIPEI-DLCKVEPWDVPGRSVIKSDDPE 68

Query: 64  WYFFNAPVPKYANSKRINRTTNSGFWKSTCKDREI-WDERGKKIGLKKNLVFHEGRVPNG 122
           W+FF+    KY  SKR NRTT  GFWK+T  DR+I        IG KK LVFH+GRVP G
Sbjct: 69  WFFFSPVDYKYLKSKRFNRTTKRGFWKATGNDRKIRIPGTSNVIGTKKTLVFHQGRVPRG 128

Query: 123 IRTKWVMHEYHSLNASSYPKEFVLFRLKKKSGAKPDARNEPTPQDLAFDSGNRAI 177
            +T WV+HEYH++ +    + FVL RL KK+    + +NE   +  +FD G  +I
Sbjct: 129 AKTNWVIHEYHAVTSHESQRAFVLCRLMKKA----EKKNEGGIEAPSFDEGEPSI 179

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356522462|ref|XP_003529865.1| PREDICTED: NAC domain-containing protein 69-like [Glycine max]

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 80/175 (45%), Positives = 110/175 (62%), Gaps = 6/175 (3%)

Query: 4   HGVVGFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRV 63
           H  VGFRF PTDEE+V Y+L+ K+   DFP H I ++ D+CK EPW++P+RS +  +D  
Sbjct: 11  HMPVGFRFRPTDEELVNYYLKHKLLADDFPVHIIPEI-DLCKVEPWDVPERSVIKSDDPE 69

Query: 64  WYFFNAPVPKYANSKRINRTTNSGFWKSTCKDREI-WDERGKKIGLKKNLVFHEGRVPNG 122
           W+FF+    KY  SKR NRTT  G+WK+T  DR +        IG KK LVFHEGR P G
Sbjct: 70  WFFFSPVDYKYLKSKRFNRTTKRGYWKTTGNDRNVKIPGTSNVIGTKKTLVFHEGRGPRG 129

Query: 123 IRTKWVMHEYHSLNASSYPKEFVLFRLKKKSGAKPDARNEPTPQDLAFDSGNRAI 177
           ++T WV+HEYH++ +    + FVL RL KK+    + +NE   +   FD G  ++
Sbjct: 130 VKTNWVIHEYHAVTSHESQRAFVLCRLMKKA----EKKNEGGIEAPTFDEGEPSV 180

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224063973|ref|XP_002301328.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222843054|gb|EEE80601.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 90/202 (44%), Positives = 124/202 (61%), Gaps = 17/202 (8%)

Query: 7   VGFRFHPTDEEIVTYFLERKMCG-LDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWY 65
           VG+ FHPTDEE+V +FL+ KM G  D    TIA+V +VC YEPWELP  S++   D   Y
Sbjct: 13  VGYGFHPTDEELVNHFLKLKMIGGYDHVVSTIAEV-NVCNYEPWELPGLSAIQSNDPECY 71

Query: 66  FFNAPVPKYANSKRINRTTNSGFWKSTCKDREIWDER-GKKIGLKKNLVFHEGRVPNGIR 124
           FF+ P  KY+ S+R NRTT +G+WK T +DR I  +  G++I  KK LVF+ GRVPNG+R
Sbjct: 72  FFSRPNYKYSKSQRANRTTGAGYWKGTGRDRTITAKSTGEQIATKKTLVFYNGRVPNGVR 131

Query: 125 TKWVMHEYHSLNASSYPKEFVLFRLKKKSGAKPDARNEPTPQDL-AFDSGNRAIENTNPQ 183
           T W+MHEY+   +    ++F+L++LKK             P DL AFD G  +  N + +
Sbjct: 132 TNWIMHEYNPTFSFPNKRDFILYKLKKN------------PDDLPAFDEGESSASNVDEE 179

Query: 184 INRGLPEEWQLFLSDTELDYNL 205
            ++ L  + + F    E DYNL
Sbjct: 180 DSQ-LRAQLESFSGIDEGDYNL 200

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359486687|ref|XP_002265345.2| PREDICTED: NAC domain-containing protein 78-like [Vitis vinifera] gi|296085948|emb|CBI31389.3| unnamed protein product [Vitis vinifera]

 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 75/155 (48%), Positives = 100/155 (64%), Gaps = 7/155 (4%)

Query: 8   GFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYFF 67
           GFRFHPTDEE+V Y+L+RK+CG  F   TI+++ D+ K EPW+LP +S +   D  WYFF
Sbjct: 12  GFRFHPTDEELVWYYLKRKVCGKLFRFDTISEI-DIYKSEPWDLPGQSKLKSRDLEWYFF 70

Query: 68  NAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERGKKIGLKKNLVFHEGRVPNGIRTKW 127
           +    KY N  R NR T+ G+WK+T KDRE+   R + +G+KK LV+H GR P G RT W
Sbjct: 71  SVLDKKYGNGSRTNRATDRGYWKTTGKDREV-RHRARTVGMKKTLVYHSGRAPRGERTNW 129

Query: 128 VMHEYHSLN-----ASSYPKEFVLFRLKKKSGAKP 157
           VMHEY  ++            FVL R+ +KSG+ P
Sbjct: 130 VMHEYRLMDEELKKTGVAQDAFVLCRIFQKSGSGP 164

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147802301|emb|CAN70406.1| hypothetical protein VITISV_021988 [Vitis vinifera]

 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 75/155 (48%), Positives = 100/155 (64%), Gaps = 7/155 (4%)

Query: 8   GFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYFF 67
           GFRFHPTDEE+V Y+L+RK+CG  F   TI+++ D+ K EPW+LP +S +   D  WYFF
Sbjct: 12  GFRFHPTDEELVWYYLKRKVCGKLFRFDTISEI-DIYKSEPWDLPGQSKLKSRDLEWYFF 70

Query: 68  NAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERGKKIGLKKNLVFHEGRVPNGIRTKW 127
           +    KY N  R NR T+ G+WK+T KDRE+   R + +G+KK LV+H GR P G RT W
Sbjct: 71  SVLDKKYGNGSRTNRATDRGYWKTTGKDREV-RHRARTVGMKKTLVYHSGRAPRGERTNW 129

Query: 128 VMHEYHSLN-----ASSYPKEFVLFRLKKKSGAKP 157
           VMHEY  ++            FVL R+ +KSG+ P
Sbjct: 130 VMHEYRLMDEELKKTGVAQDAFVLCRIFQKSGSGP 164

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453680|ref|XP_002268892.1| PREDICTED: uncharacterized protein LOC100252386 [Vitis vinifera]

 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 123/383 (32%), Positives = 177/383 (46%), Gaps = 55/383 (14%)

Query: 7   VGFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYF 66
           VGFRFHPTDEE+V ++L+ K+ G++     I +V DVCK+EPW+LP  S +   D  W+F
Sbjct: 16  VGFRFHPTDEELVDHYLKLKILGMNSHVDIIPEV-DVCKWEPWDLPVLSVIQTNDPEWFF 74

Query: 67  FNAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERGKK-IGLKKNLVFHEGRVPNGIRT 125
           F  P  KY   +R NR T +G+WK T KDR I     K+ +G KK LVF+ GR P  +RT
Sbjct: 75  FCPPDYKYPTGRRSNRATEAGYWKPTGKDRNIKSRATKELLGTKKTLVFYRGRAPQSVRT 134

Query: 126 KWVMHEYHSLNAS-SYPKEFVLFRLKKKSGAKPDARNEPTPQDLAFDSGNRAIENTNPQI 184
            WVMHEY +  AS    K +VL RLK+K+                        ENT P I
Sbjct: 135 NWVMHEYRAAIASLPANKAYVLCRLKRKTD-----------------------ENTGPDI 171

Query: 185 NRGLPEEWQLFLSDTELDYNLLADSNGFHDNTFSELPPNIQPERGT-SINSSVFDRILQP 243
                    +F  D   +   L      H +  +    N Q E  T  ++  + D   +P
Sbjct: 172 PPETNVNGIVFNMDGLANMVTLGGEPSHHASISASNIGNYQVEEPTPEMDPLIQDLFNEP 231

Query: 244 MVQPERGTSINSSVFDRILQPMVQPEHGTSYSDGFNN--EPSFLNDSCLETSEQEEAFVN 301
              P        + +D        P     +++GFNN  E +   D   E  +    F+N
Sbjct: 232 TFIP--------ADYDFSSDTEQGPHLDLPFANGFNNVCERTLFQDGSSEPDDDVSRFLN 283

Query: 302 SLWADQ-----GECFGERS----MNTLRH------DFNPTISLRG--GRSIGQSSDADSK 344
           +L  DQ     GE   +RS       LR+         P   L+G  G+  G SSD D++
Sbjct: 284 TLIVDQDEHPFGELASQRSSPVDSGNLRYGSIGKLSARPQSPLKGVYGKGGGSSSDTDTE 343

Query: 345 IYQ-QHGKVPGTSNVFYEKTHAQ 366
           + Q Q+ +   TS++    +H++
Sbjct: 344 VLQVQYSQSRKTSSLINGVSHSK 366

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357451351|ref|XP_003595952.1| NAC domain protein [Medicago truncatula] gi|355485000|gb|AES66203.1| NAC domain protein [Medicago truncatula]

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 76/161 (47%), Positives = 104/161 (64%), Gaps = 8/161 (4%)

Query: 8   GFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYFF 67
           GFRFHPTDEE+V Y+LERK+ G       IA+V D+ K EPW+LP+RS +P +D  WYF+
Sbjct: 9   GFRFHPTDEELVAYYLERKITGRTIELDIIAEV-DLYKCEPWDLPERSFLPSKDMEWYFY 67

Query: 68  NAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERGKKIGLKKNLVFHEGRVPNGIRTKW 127
           +    KY N  R NR T  G+WK+T KDR + + + K++G+KK LV+++GR P+GIRT W
Sbjct: 68  SPRDRKYPNGSRTNRATRGGYWKATGKDRAV-NSQKKQVGMKKTLVYYKGRAPHGIRTNW 126

Query: 128 VMHEYHSLNA------SSYPKEFVLFRLKKKSGAKPDARNE 162
           VMHEY  + +      SS    + L R+ KK+   P   NE
Sbjct: 127 VMHEYRLIESHPGASLSSLKDSYSLCRIFKKTIQIPTKTNE 167

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297829590|ref|XP_002882677.1| ANAC053 [Arabidopsis lyrata subsp. lyrata] gi|297328517|gb|EFH58936.1| ANAC053 [Arabidopsis lyrata subsp. lyrata]

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 75/155 (48%), Positives = 98/155 (63%), Gaps = 7/155 (4%)

Query: 8   GFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYFF 67
           GFRFHPTDEE+V Y+L+RK+C   F    I+ V DV K EPW+LP +S +   D  WYFF
Sbjct: 12  GFRFHPTDEELVRYYLKRKICNKPFKFDAIS-VTDVYKSEPWDLPDKSKLKSRDLEWYFF 70

Query: 68  NAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERGKKIGLKKNLVFHEGRVPNGIRTKW 127
           +    KY N  + NR T  G+WK+T KDREI +   K +G+KK LV+H+GR P G RT W
Sbjct: 71  SMLDKKYRNGSKTNRATEMGYWKTTGKDREILN-GSKVVGMKKTLVYHKGRAPRGERTNW 129

Query: 128 VMHEYHSLN-----ASSYPKEFVLFRLKKKSGAKP 157
           VMHEY  ++        +   FVL R+ +KSG+ P
Sbjct: 130 VMHEYRLVDEDLDKTGVHQDAFVLCRIFQKSGSGP 164

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|293336942|ref|NP_001168544.1| uncharacterized protein LOC100382324 [Zea mays] gi|223949061|gb|ACN28614.1| unknown [Zea mays] gi|413921743|gb|AFW61675.1| putative NAC domain transcription factor superfamily protein [Zea mays]

 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 77/154 (50%), Positives = 102/154 (66%), Gaps = 7/154 (4%)

Query: 8   GFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYFF 67
           GFRFHPTDEE+V+Y+L+RK+ G       IADV D+ K EPW+LP RS +   D  WYFF
Sbjct: 29  GFRFHPTDEELVSYYLKRKVLGRPLKVDAIADV-DLYKLEPWDLPARSRLRSRDSQWYFF 87

Query: 68  NAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERGKK-IGLKKNLVFHEGRVPNGIRTK 126
           +    K+AN  R NR T+ G+WK+T KDRE+    G + +G+KK LVFH GR P G RT 
Sbjct: 88  SRLDRKHANRARTNRATSGGYWKTTGKDREV--RHGPRLVGMKKTLVFHAGRAPKGERTN 145

Query: 127 WVMHEYH--SLNASSYPKE-FVLFRLKKKSGAKP 157
           WVMHEY     +A+  P++ FV+ R+ +K+G  P
Sbjct: 146 WVMHEYRLEGDDAAGIPQDSFVVCRIFQKAGPGP 179

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297806417|ref|XP_002871092.1| hypothetical protein ARALYDRAFT_908325 [Arabidopsis lyrata subsp. lyrata] gi|297316929|gb|EFH47351.1| hypothetical protein ARALYDRAFT_908325 [Arabidopsis lyrata subsp. lyrata]

 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 75/155 (48%), Positives = 100/155 (64%), Gaps = 7/155 (4%)

Query: 8   GFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYFF 67
           GFRFHPTDEE+V Y+L+RK+C   F    I+ V D+ K EPW+LP +S +   D  WYFF
Sbjct: 12  GFRFHPTDEELVRYYLKRKVCNKPFKFDAIS-VTDIYKSEPWDLPDKSKLKSRDLEWYFF 70

Query: 68  NAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERGKKIGLKKNLVFHEGRVPNGIRTKW 127
           +    KY+N  + NR T  G+WK+T KDREI +   + +G+KK LV+H+GR P G RT W
Sbjct: 71  SMLDKKYSNGSKTNRATEKGYWKTTGKDREIRN-GSRVVGMKKTLVYHKGRAPRGERTNW 129

Query: 128 VMHEYH----SLNASSYPKE-FVLFRLKKKSGAKP 157
           VMHEY      L  +  P+E +VL R+ +KSG  P
Sbjct: 130 VMHEYRLSDEDLKKAGVPQEAYVLCRIFQKSGTGP 164

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	451
TAIR|locus:2167155	476	NAC086 "NAC domain containing	0.363	0.344	0.443	1.5e-37
TAIR|locus:2184342	567	NAC2 "NAC domain containing pr	0.325	0.259	0.487	2.9e-36
TAIR|locus:2009096	557	NAC017 "NAC domain containing	0.328	0.265	0.490	6.4e-36
TAIR|locus:2160324	329	NAC080 "NAC domain containing	0.319	0.437	0.468	9.2e-36
TAIR|locus:2097720	479	NAC045 "NAC domain containing	0.363	0.342	0.460	9.2e-36
TAIR|locus:2095007	314	NAC058 "NAC domain containing	0.656	0.942	0.329	1.2e-35
TAIR|locus:2075815	549	NAC053 "AT3G10500" [Arabidopsi	0.328	0.269	0.490	1.5e-35
TAIR|locus:2009729	631	NAC028 "NAC domain containing	0.272	0.194	0.488	1.8e-35
TAIR|locus:2020123	301	NAC020 "NAC domain containing	0.339	0.508	0.458	3.1e-35
TAIR|locus:2061082	316	NAC038 "NAC domain containing	0.598	0.854	0.343	5.1e-35

TAIR|locus:2167155 NAC086 "NAC domain containing protein 86" [Arabidopsis thaliana (taxid:3702)]

 Score = 371 (135.7 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
 Identities = 78/176 (44%), Positives = 105/176 (59%)

Query:     8 GFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYFF 67
             GFRFHPTDEE++TY+L+RK+ G +     I +V D+ K EPW+LP +S +P +D+ W+FF
Sbjct:     9 GFRFHPTDEELITYYLKRKINGQEIELEIIPEV-DLYKCEPWDLPGKSLIPSKDQEWFFF 67

Query:    68 NAPVPKYANSKRINRTTNSGFWKSTCKDREI-WDERGKKIGLKKNLVFHEGRVPNGIRTK 126
             +    KY N  R NR T  G+WK+T KDR + W +R   IG KK LV++ GR P+GIRT 
Sbjct:    68 SPRDRKYPNGSRTNRATKGGYWKATGKDRRVSWRDRA--IGTKKTLVYYRGRAPHGIRTG 125

Query:   127 WVMHEYHSLNASSYPKEF------VLFRLKKKS--GAKPDARNEPTPQDLAFDSGN 174
             WVMHEY    +   P  F       L R+ KK    AKP  +++   Q     S N
Sbjct:   126 WVMHEYRLDESECEPSAFGMQDAYALCRVFKKIVIEAKPRDQHQQQHQPYVHTSSN 181

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2184342 NAC2 "NAC domain containing protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 391 (142.7 bits), Expect = 2.9e-36, P = 2.9e-36
 Identities = 76/156 (48%), Positives = 100/156 (64%)

Query:     8 GFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYFF 67
             GFRFHPTDEE+V Y+L+RK+C   F    I+ V D+ K EPW+LP +S +   D  WYFF
Sbjct:    12 GFRFHPTDEELVRYYLKRKVCNKPFKFDAIS-VTDIYKSEPWDLPDKSKLKSRDLEWYFF 70

Query:    68 NAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERGKKI-GLKKNLVFHEGRVPNGIRTK 126
             +    KY+N  + NR T  G+WK+T KDREI    G ++ G+KK LV+H+GR P G RT 
Sbjct:    71 SMLDKKYSNGSKTNRATEKGYWKTTGKDREI--RNGSRVVGMKKTLVYHKGRAPRGERTN 128

Query:   127 WVMHEYH----SLNASSYPKE-FVLFRLKKKSGAKP 157
             WVMHEY      L  +  P+E +VL R+ +KSG  P
Sbjct:   129 WVMHEYRLSDEDLKKAGVPQEAYVLCRIFQKSGTGP 164

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=IDA

GO:0009644 "response to high light intensity" evidence=IEP

GO:0009962 "regulation of flavonoid biosynthetic process" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

TAIR|locus:2009096 NAC017 "NAC domain containing protein 17" [Arabidopsis thaliana (taxid:3702)]

 Score = 368 (134.6 bits), Expect = 6.4e-36, Sum P(2) = 6.4e-36
 Identities = 76/155 (49%), Positives = 99/155 (63%)

Query:     8 GFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYFF 67
             GFRFHPTDEE+V Y+L+RK+C      + I  VVDV K +P ELP +S +   DR W++F
Sbjct:    19 GFRFHPTDEELVMYYLKRKICRKRLRVNVIG-VVDVYKMDPEELPGQSMLKTGDRQWFYF 77

Query:    68 NAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERGKKIGLKKNLVFHEGRVPNGIRTKW 127
                  KY N+ R NR T +G+WK+T KDR I +   + +GLKK LVF+ GR P+G RT W
Sbjct:    78 TPRSRKYPNAARSNRGTENGYWKATGKDRVI-EYNSRSVGLKKTLVFYRGRAPSGERTDW 136

Query:   128 VMHEY----HSLNASSYPKEF-VLFRLKKKSGAKP 157
             VMHEY      L     P+E+  L++L KKSGA P
Sbjct:   137 VMHEYTMDEDELGRCKNPQEYYALYKLFKKSGAGP 171

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006623 "protein targeting to vacuole" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0016192 "vesicle-mediated transport" evidence=RCA

GO:0016197 "endosomal transport" evidence=RCA

TAIR|locus:2160324 NAC080 "NAC domain containing protein 80" [Arabidopsis thaliana (taxid:3702)]

 Score = 352 (129.0 bits), Expect = 9.2e-36, Sum P(2) = 9.2e-36
 Identities = 74/158 (46%), Positives = 103/158 (65%)

Query:     8 GFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYFF 67
             GFRFHPTDEE++T++L +K+  L F A  I +V D+ K EPWELP ++ + +++  WYFF
Sbjct:    20 GFRFHPTDEELITHYLHKKVLDLGFSAKAIGEV-DLNKAEPWELPYKAKIGEKE--WYFF 76

Query:    68 NAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERGKK-IGLKKNLVFHEGRVPNGIRTK 126
                  KY    R NR T +G+WK+T KD+EI+  RGK  +G+KK LVF+ GR P G +T 
Sbjct:    77 CVRDRKYPTGLRTNRATQAGYWKATGKDKEIF--RGKSLVGMKKTLVFYRGRAPKGQKTN 134

Query:   127 WVMHEYH---SLNASSYPK----EFVLFRL-KKKSGAK 156
             WVMHEY     L+A + PK    E+V+ R+  K +G K
Sbjct:   135 WVMHEYRLDGKLSAHNLPKTAKNEWVICRVFHKTAGGK 172

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2097720 NAC045 "NAC domain containing protein 45" [Arabidopsis thaliana (taxid:3702)]

 Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
 Identities = 81/176 (46%), Positives = 110/176 (62%)

Query:     8 GFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYFF 67
             GFRFHPTDEE++TY+L+RK+ GL+     IA+V D+ K EPW+LP +S +P +D+ WYFF
Sbjct:     9 GFRFHPTDEELITYYLKRKINGLEIELEVIAEV-DLYKCEPWDLPGKSLLPSKDQEWYFF 67

Query:    68 NAPVPKYANSKRINRTTNSGFWKSTCKDREI-WDERGKKIGLKKNLVFHEGRVPNGIRTK 126
             +    KY N  R NR T  G+WK+T KDR + W +R   IG KK LV++ GR P+GIRT 
Sbjct:    68 SPRDRKYPNGSRTNRATKGGYWKATGKDRRVSWRDRA--IGTKKTLVYYRGRAPHGIRTG 125

Query:   127 WVMHEYH----SLNASSYPKE--FVLFRLKKKS--GAKPDARNEPTPQDLAFDSGN 174
             WVMHEY         S+Y  +  + L R+ KK    AKP  ++      ++  SGN
Sbjct:   126 WVMHEYRLDETECEPSAYGMQDAYALCRVFKKIVIEAKPRDQHRSYVHAMSNVSGN 181

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2095007 NAC058 "NAC domain containing protein 58" [Arabidopsis thaliana (taxid:3702)]

 Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
 Identities = 106/322 (32%), Positives = 170/322 (52%)

Query:     1 MEGHGVVGFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKE 60
             ME +   GFRFHPTDEE++T++L RK+  + F    + DV D+ K EPW+LP ++SM ++
Sbjct:     1 MEENLPPGFRFHPTDEELITHYLCRKVSDIGFTGKAVVDV-DLNKCEPWDLPAKASMGEK 59

Query:    61 DRVWYFFNAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERGKKIGLKKNLVFHEGRVP 120
             +  WYFF+    KY    R NR T +G+WK+T KD+EI+   G  +G+KK LVF++GR P
Sbjct:    60 E--WYFFSQRDRKYPTGLRTNRATEAGYWKTTGKDKEIY-RSGVLVGMKKTLVFYKGRAP 116

Query:   121 NGIRTKWVMHEYHSLNASSY-P---KEFVLFRLKKKS-GAKPDARNEPTPQDLAFDS--- 172
              G ++ WVMHEY   +   + P   +E+V+ R+ +KS  AK     +P     +F S   
Sbjct:   117 KGEKSNWVMHEYRLESKQPFNPTNKEEWVVCRVFEKSTAAKKAQEQQPQSSQPSFGSPCD 176

Query:   173 GNRAIENTNPQINRGLPEEWQLFLSDTELDYN----LLADSNGF-HDNTFSELPPNIQPE 227
              N ++ N    I+  LP    L  + + +DYN      +  N +  DNT S    N+   
Sbjct:   177 ANSSMANEFEDIDE-LPN---LNSNSSTIDYNNHIHQYSQRNVYSEDNTTSTAGLNMNMN 232

Query:   228 RGTSINSSVFDRILQPMVQPERGTSINS-SVFDRILQP--MVQPEHGTSYSDGFNNE-PS 283
               ++   S    +L P + P     + +  + +    P  M+   + +S   G +N   +
Sbjct:   233 MASTNLQSWTTSLLGPPLSPINSLLLKAFQIRNSYSFPKEMIPSFNHSSLQQGVSNMIQN 292

Query:   284 FLNDSCLETSEQEEAF-VNSLW 304
               + S ++   QEEAF ++S+W
Sbjct:   293 ASSSSQVQPQPQEEAFNMDSIW 314

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2075815 NAC053 "AT3G10500" [Arabidopsis thaliana (taxid:3702)]

 Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
 Identities = 76/155 (49%), Positives = 100/155 (64%)

Query:     8 GFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYFF 67
             GFRFHPTDEE+V Y+L+RK+C   F    I+ V DV K EPW+LP +S +   D  WYFF
Sbjct:    12 GFRFHPTDEELVRYYLKRKICNKPFKFDAIS-VTDVYKSEPWDLPDKSRLKSRDLEWYFF 70

Query:    68 NAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERGKKIGLKKNLVFHEGRVPNGIRTKW 127
             +    KY N  + NR T  G+WK+T KDREI +   K +G+KK LV+H+GR P G RT W
Sbjct:    71 SMLDKKYRNGSKTNRATEMGYWKTTGKDREILNG-SKVVGMKKTLVYHKGRAPRGERTNW 129

Query:   128 VMHEYH----SLNASSYPKE-FVLFRLKKKSGAKP 157
             VMHEY      L+ +   ++ FVL R+ +KSG+ P
Sbjct:   130 VMHEYRLVDQDLDKTGVHQDAFVLCRIFQKSGSGP 164

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0009819 "drought recovery" evidence=IMP

GO:0010150 "leaf senescence" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:2000377 "regulation of reactive oxygen species metabolic process" evidence=IMP

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

TAIR|locus:2009729 NAC028 "NAC domain containing protein 28" [Arabidopsis thaliana (taxid:3702)]

 Score = 343 (125.8 bits), Expect = 1.8e-35, Sum P(3) = 1.8e-35
 Identities = 61/125 (48%), Positives = 84/125 (67%)

Query:     8 GFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYFF 67
             GFRFHPTDEE+V Y+L+RK+ G       I ++ D+ K EPW+LP +S +P +D  W+FF
Sbjct:     9 GFRFHPTDEELVIYYLKRKINGRTIELEIIPEI-DLYKCEPWDLPGKSLLPSKDLEWFFF 67

Query:    68 NAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERGKKIGLKKNLVFHEGRVPNGIRTKW 127
             +    KY N  R NR T +G+WK+T KDR++     + +G KK LV++ GR P+G RT W
Sbjct:    68 SPRDRKYPNGSRTNRATKAGYWKATGKDRKV-TSHSRMVGTKKTLVYYRGRAPHGSRTDW 126

Query:   128 VMHEY 132
             VMHEY
Sbjct:   127 VMHEY 131

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2020123 NAC020 "NAC domain containing protein 20" [Arabidopsis thaliana (taxid:3702)]

 Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
 Identities = 72/157 (45%), Positives = 102/157 (64%)

Query:     8 GFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYFF 67
             GFRFHPTDEE+V Y+L+RK+ G       I +V D+ K EPW+LP++S +P  D  WYF+
Sbjct:     9 GFRFHPTDEELVAYYLDRKVNGQAIELEIIPEV-DLYKCEPWDLPEKSFLPGNDMEWYFY 67

Query:    68 NAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERGKKIGLKKNLVFHEGRVPNGIRTKW 127
             +    KY N  R NR T +G+WK+T KDR + + +  K+G+KK LV++ GR P+G+RT W
Sbjct:    68 STRDKKYPNGSRTNRATRAGYWKATGKDRTV-ESKKMKMGMKKTLVYYRGRAPHGLRTNW 126

Query:   128 VMHEYHSLNA--SSYPKEFVLFRLKKKSGAKPDARNE 162
             VMHEY   +A  SS  + + L R+ KK+   P  + E
Sbjct:   127 VMHEYRLTHAPSSSLKESYALCRVFKKNIQIPKRKGE 163

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2061082 NAC038 "NAC domain containing protein 38" [Arabidopsis thaliana (taxid:3702)]

 Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
 Identities = 100/291 (34%), Positives = 151/291 (51%)

Query:     8 GFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYFF 67
             GFRFHPTDEE+++Y+L  K+   +F    IADV D+ K EPWELP+++ M  ++  WYFF
Sbjct:    19 GFRFHPTDEELISYYLVNKIADQNFTGKAIADV-DLNKSEPWELPEKAKMGGKE--WYFF 75

Query:    68 NAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERGKK-IGLKKNLVFHEGRVPNGIRTK 126
             +    KY    R NR TN+G+WK+T KD+EI++    + +G+KK LVF+ GR P G +T 
Sbjct:    76 SLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSTTSELVGMKKTLVFYRGRAPRGEKTC 135

Query:   127 WVMHEYHSLNASSY----PKEFVLFRLKKKSGA-KPDARNEPTPQDLAFDSGNRA----I 177
             WVMHEY   + SSY      E+V+ R+ KK+ A K       +      ++  RA     
Sbjct:   136 WVMHEYRLHSKSSYRTSKQDEWVVCRVFKKTEATKKYISTSSSSTSHHHNNHTRASILST 195

Query:   178 ENTNPQINRGLPEEWQLFLSDTELDYNLLADSNGFHDNTFSELPPNIQPERGTSINSSVF 237
              N NP  +  L +          L+ N    +N  H    +EL    +    T+++SS  
Sbjct:   196 NNNNPNYSSDLLQLPPHLQPHPSLNINQSLMANAVH---LAELSRVFRASTSTTMDSS-H 251

Query:   238 DRILQPMVQPERGTSINSSVFDRILQP--MVQPEHGTSYSDGFNNEPSFLN 286
              +++     P  G ++N      ++QP  +V  E   + S  +N E  F N
Sbjct:   252 QQLMNYTHMPVSGLNLNLG--GALVQPPPVVSLEDVAAVSASYNGENGFGN 300

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	451
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	3e-61

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  195 bits (497), Expect = 3e-61
 Identities = 63/127 (49%), Positives = 83/127 (65%), Gaps = 1/127 (0%)

Query: 7   VGFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYF 66
            GFRFHPTDEE+V Y+L+RK+ G   P   +   VD+ K+EPW+LP        DR WYF
Sbjct: 3   PGFRFHPTDEELVVYYLKRKVLGKPLPLLDVIPEVDIYKFEPWDLP-DGKAKGGDREWYF 61

Query: 67  FNAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERGKKIGLKKNLVFHEGRVPNGIRTK 126
           F+    KY N  R NR T SG+WK+T KD+ +  + G+ +G+KK LVF++GR P G +T 
Sbjct: 62  FSPRDRKYPNGSRTNRATGSGYWKATGKDKPVLSKGGEVVGMKKTLVFYKGRAPKGEKTD 121

Query: 127 WVMHEYH 133
           WVMHEY 
Sbjct: 122 WVMHEYR 128

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	451
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=2.5e-42  Score=303.08  Aligned_cols=128  Identities=48%  Similarity=0.869  Sum_probs=96.7

Q ss_pred             CCCceeECCChHHHHHHHHHHHHCCCCCCC-CcccccCcCCCCCCCCCCccCCCCCCCceEEEEecCCCCCCCCCccccc
Q 013027            5 GVVGFRFHPTDEEIVTYFLERKMCGLDFPA-HTIADVVDVCKYEPWELPQRSSMPKEDRVWYFFNAPVPKYANSKRINRT   83 (451)
Q Consensus         5 LPpGFRF~PTDEELV~~YL~~Ki~G~plp~-~vI~e~vDVY~~ePWdLP~~~~~~~~e~eWYFFS~r~rKy~nG~R~nRa   83 (451)
                      |||||||+|||+|||.+||++|+.|.+++. ++|.+ +|||++|||+||+...  +.+.+||||+++++++++|.|++|+
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~~~~~~~i~~-~Diy~~~P~~L~~~~~--~~~~~~yFF~~~~~~~~~~~r~~R~   77 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEPLPCEDVIHD-VDIYSAHPWELPAKFK--GGDEEWYFFSPRKKKYPNGGRPNRV   77 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-HHCS-CHSEE---GGGS-GGGCHHHSS--S-SSEEEEEEE----------S-EE
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCCCCcccceee-cccCccChHHhhhhcc--CCCceEEEEEecccccCCccccccc
Confidence            899999999999999999999999999887 79999 9999999999995322  2377999999999999999999999


Q ss_pred             cCCcEEEeeccCeeEEcCCCcEEEEEEEeEeeeCcCCCCcccCceEEEEEeC
Q 013027           84 TNSGFWKSTCKDREIWDERGKKIGLKKNLVFHEGRVPNGIRTKWVMHEYHSL  135 (451)
Q Consensus        84 tggGyWKatG~~K~I~~~~g~vVG~KKtLvFY~GrapkG~KT~WvMHEYrL~  135 (451)
                      +++|+||++|+.++|.+.++.+||+||+|+||.++.+++.+|+|+||||+|.
T Consensus        78 ~~~G~Wk~~g~~~~i~~~~g~~iG~k~~l~f~~~~~~~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen   78 TGGGYWKSTGKEKPIKDPGGKVIGFKKTLVFYSGKSPNGKKTGWVMHEYSLE  129 (129)
T ss_dssp             ETTEEEEEECEEEEEEE-TTCEEEEEEEEEEEESSTTS-EEEEEEEEEEEE-
T ss_pred             ccceEEeecccccccccccceeeeeEEEEEEEeccCCCCCcCCeEEEEEEeC
Confidence            9999999999999999976669999999999999888999999999999984

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	451
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		6e-29
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		6e-29
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		3e-28

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score =  125 bits (313), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 64/150 (42%), Positives = 95/150 (63%), Gaps = 9/150 (6%)
Query: 8   GFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYFF 67
           GFRF+PTDEE++  +L RK  G DF    IA++ D+ K++PW LP ++   +++  WYFF
Sbjct: 23  GFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEI-DLYKFDPWVLPNKALFGEKE--WYFF 79
Query: 68  NAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERGKKIGLKKNLVFHEGRVPNGIRTKW 127
           +    KY N  R NR   SG+WK+T  D+ I  E G+++G+KK LVF+ G+ P G +T W
Sbjct: 80  SPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTE-GQRVGIKKALVFYIGKAPKGTKTNW 138
Query: 128 VMHEYHSL-----NASSYPKEFVLFRLKKK 152
           +MHEY  +     N S+   ++VL R+ KK
Sbjct: 139 IMHEYRLIEPSRRNGSTKLDDWVLCRIYKK 168

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score =  125 bits (313), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 64/150 (42%), Positives = 95/150 (63%), Gaps = 9/150 (6%)
Query: 8   GFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYFF 67
           GFRF+PTDEE++  +L RK  G DF    IA++ D+ K++PW LP ++   +++  WYFF
Sbjct: 20  GFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEI-DLYKFDPWVLPNKALFGEKE--WYFF 76
Query: 68  NAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERGKKIGLKKNLVFHEGRVPNGIRTKW 127
           +    KY N  R NR   SG+WK+T  D+ I  E G+++G+KK LVF+ G+ P G +T W
Sbjct: 77  SPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTE-GQRVGIKKALVFYIGKAPKGTKTNW 135
Query: 128 VMHEYHSL-----NASSYPKEFVLFRLKKK 152
           +MHEY  +     N S+   ++VL R+ KK
Sbjct: 136 IMHEYRLIEPSRRNGSTKLDDWVLCRIYKK 165

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score =  122 bits (307), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 58/126 (46%), Positives = 82/126 (65%), Gaps = 4/126 (3%)
Query: 8   GFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYFF 67
           GFRFHPTD+E+V ++L RK  G   P   IA+V D+ K++PW+LP+R+      R WYFF
Sbjct: 18  GFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEV-DLYKFDPWDLPERALF--GAREWYFF 74
Query: 68  NAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERGKKIGLKKNLVFHEGRVPNGIRTKW 127
                KY N  R NR   +G+WK+T  D+ +   RG+ +G+KK LVF+ G+ P G++T W
Sbjct: 75  TPRDRKYPNGSRPNRAAGNGYWKATGADKPV-APRGRTLGIKKALVFYAGKAPRGVKTDW 133
Query: 128 VMHEYH 133
           +MHEY 
Sbjct: 134 IMHEYR 139

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	451
1ut7_A	171	No apical meristem protein; transcription regulati	1e-67
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	2e-66
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-05

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  212 bits (543), Expect = 1e-67
 Identities = 63/156 (40%), Positives = 93/156 (59%), Gaps = 9/156 (5%)

Query: 7   VGFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYF 66
            GFRF+PTDEE++  +L RK  G DF    IA++ D+ K++PW LP ++     ++ WYF
Sbjct: 19  PGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEI-DLYKFDPWVLPNKALF--GEKEWYF 75

Query: 67  FNAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERGKKIGLKKNLVFHEGRVPNGIRTK 126
           F+    KY N  R NR   SG+WK+T  D+ I    G+++G+KK LVF+ G+ P G +T 
Sbjct: 76  FSPRDRKYPNGSRPNRVAGSGYWKATGTDKIIST-EGQRVGIKKALVFYIGKAPKGTKTN 134

Query: 127 WVMHEYH-----SLNASSYPKEFVLFRLKKKSGAKP 157
           W+MHEY        N S+   ++VL R+ KK  +  
Sbjct: 135 WIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSSAQ 170

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  209 bits (534), Expect = 2e-66
 Identities = 64/161 (39%), Positives = 91/161 (56%), Gaps = 14/161 (8%)

Query: 7   VGFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYF 66
            GFRFHPTD+E+V ++L RK  G   P   IA+V D+ K++PW+LP+R+      R WYF
Sbjct: 17  PGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEV-DLYKFDPWDLPERALF--GAREWYF 73

Query: 67  FNAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERGKKIGLKKNLVFHEGRVPNGIRTK 126
           F     KY N  R NR   +G+WK+T  D+ +   RG+ +G+KK LVF+ G+ P G++T 
Sbjct: 74  FTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAP-RGRTLGIKKALVFYAGKAPRGVKTD 132

Query: 127 WVMHEYHSLNASSYPK----------EFVLFRLKKKSGAKP 157
           W+MHEY   +A               ++VL RL  K     
Sbjct: 133 WIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKNEWE 173

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.9 bits (113), Expect = 6e-06
 Identities = 68/517 (13%), Positives = 142/517 (27%), Gaps = 138/517 (26%)

Query: 16  EEIVTYFLERKMCGLDFP--AHTIADVVDVCKYEPWELPQRSSMPKEDRVWYFFNAPVPK 73
           EE+V  F+E  +  +++      I       + +P  +  R  + + DR++   N    K
Sbjct: 76  EEMVQKFVEEVL-RINYKFLMSPIKTE---QR-QP-SMMTRMYIEQRDRLYND-NQVFAK 128

Query: 74  YANSKRINRTTN-------------------SGFWKS-----TCKDREIWDERGKKIGLK 109
           Y N  R+                         G  K+      C   ++           
Sbjct: 129 Y-NVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKV----------- 176

Query: 110 KNLVFHEGRVPNGIRTKWV-MHEYHSLNASSYPKEFVLFRLKKKSGAKPD-ARNEPTPQD 167
                 + ++   I   W+ +   +S        + +L+++     ++ D + N      
Sbjct: 177 ------QCKMDFKIF--WLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIH 228

Query: 168 LAFDSGNRAIENTNPQINRGL--------PEEWQLFLSD-------TELDYNLLADSNGF 212
                  R +++        L         + W  F  +       T     +    +  
Sbjct: 229 SIQAELRRLLKS--KPYENCLLVLLNVQNAKAWNAF--NLSCKILLTTRFKQVTDFLSAA 284

Query: 213 HDNTFS--ELPPNIQPERGTSINSSVFDRILQPMVQPERGTSINS---SVFDRILQPMVQ 267
                S       + P+   S+     D   Q +  P    + N    S+    ++    
Sbjct: 285 TTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDL--PREVLTTNPRRLSIIAESIRDG-- 340

Query: 268 PEHGTSYSDGFNNEPSFLNDSC---LETSEQEEAF---------VN-------SLWADQG 308
                ++     ++ + + +S    LE +E  + F          +        +W D  
Sbjct: 341 LATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVI 400

Query: 309 ECFGERSMNTL-------RHDFNPTISLRGG---------------RSIGQSSDADSKIY 346
           +      +N L       +     TIS+                  RSI    +      
Sbjct: 401 KSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFD 460

Query: 347 QQHGKVPGTSNVFYEKT--HAQMETVWALSETSSSSEGYGIMDFDV--SSVNSDTDLPGI 402
                 P     FY     H  ++ +      +     +  +DF      +  D+     
Sbjct: 461 SDDLIPPYLDQYFYSHIGHH--LKNIEHPERMTLFRMVF--LDFRFLEQKIRHDSTAWNA 516

Query: 403 VGHESVVDELQHTPKYHKYFEARCSTQELKTQRKVSD 439
            G  S+++ LQ    Y  Y        E    R V+ 
Sbjct: 517 SG--SILNTLQQLKFYKPYICDNDPKYE----RLVNA 547

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.5 bits (104), Expect = 7e-05
 Identities = 49/340 (14%), Positives = 99/340 (29%), Gaps = 113/340 (33%)

Query: 4   HGVVGFRFHPTDEEIVTYF----------LERKMCGLDFPAH--TIADVV--DVCKYEPW 49
           H  +      T +E+ +            L R++   + P     IA+ +   +  ++ W
Sbjct: 293 HHSMTL----TPDEVKSLLLKYLDCRPQDLPREVLTTN-PRRLSIIAESIRDGLATWDNW 347

Query: 50  ELPQRSSM------------PKEDRVWYF----F--NAPVPKYANSKRINRTTNSGFW-- 89
           +      +            P E R  +     F  +A +P    +  ++       W  
Sbjct: 348 KHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIP----TILLSL-----IWFD 398

Query: 90  KSTCKDREIWDERGKKIGLKKNLVFHEGRVPNGIRTKWVMHEYHSLNASSYPKEFVLFRL 149
                   + ++  K   ++K     E  +              S+             L
Sbjct: 399 VIKSDVMVVVNKLHKYSLVEKQ--PKESTI-----------SIPSI----------YLEL 435

Query: 150 KKKSGAKP-------DARNEPTPQDLAFDSGNRAIENTNPQI---------NRGLPEEWQ 193
           K K   +        D  N P      FDS +      +            N   PE   
Sbjct: 436 KVKLENEYALHRSIVDHYNIP----KTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMT 491

Query: 194 LFLSDTELDYNLLA----------DSNGFHDNTFSELP---PNIQPERGTSINSSVFDRI 240
           LF     LD+  L           +++G   NT  +L    P I        N   ++R+
Sbjct: 492 LF-RMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICD------NDPKYERL 544

Query: 241 LQPMVQ--PERGTSINSSVFDRILQPMVQPEHGTSYSDGF 278
           +  ++   P+   ++  S +  +L+  +  E    + +  
Sbjct: 545 VNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAH 584

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	451
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=1.1e-54  Score=402.44  Aligned_cols=148  Identities=43%  Similarity=0.847  Sum_probs=132.9

Q ss_pred             CCCCCceeECCChHHHHHHHHHHHHCCCCCCCCcccccCcCCCCCCCCCCccCCCCCCCceEEEEecCCCCCCCCCcccc
Q 013027            3 GHGVVGFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYFFNAPVPKYANSKRINR   82 (451)
Q Consensus         3 ~~LPpGFRF~PTDEELV~~YL~~Ki~G~plp~~vI~e~vDVY~~ePWdLP~~~~~~~~e~eWYFFS~r~rKy~nG~R~nR   82 (451)
                      ..|||||||+|||||||.|||++|+.|.+++.++|++ +|||++|||+||+.+..+  +.+|||||++++||++|.|+||
T Consensus        13 ~~LPpGfRF~PTDeELV~~YL~~K~~g~~~~~~~I~e-vDvy~~~Pw~Lp~~~~~g--~~ewYFFs~r~~ky~~g~R~nR   89 (174)
T 3ulx_A           13 LNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAE-VDLYKFDPWDLPERALFG--AREWYFFTPRDRKYPNGSRPNR   89 (174)
T ss_dssp             TTCCTTCCCCCCHHHHHHHTHHHHHHTCCCSSSCCEE-CCGGGSCGGGSGGGCSSC--SSEEEEEEECCC-----CCSCE
T ss_pred             cCCCCcceeCCCHHHHHHHHHHHHhcCCCCCcCeeee-cccccCCchhhhhhhccC--CceEEEEeccccccCCCCCcee
Confidence            3799999999999999999999999999999999999 999999999999988765  7899999999999999999999


Q ss_pred             ccCCcEEEeeccCeeEEcCCCcEEEEEEEeEeeeCcCCCCcccCceEEEEEeCCCCCC----------CCceEEEEEEec
Q 013027           83 TTNSGFWKSTCKDREIWDERGKKIGLKKNLVFHEGRVPNGIRTKWVMHEYHSLNASSY----------PKEFVLFRLKKK  152 (451)
Q Consensus        83 atggGyWKatG~~K~I~~~~g~vVG~KKtLvFY~GrapkG~KT~WvMHEYrL~~~~~~----------~de~VLCRIykK  152 (451)
                      ++++||||+||++|+|... |.+||+||+|+||.|++|++.||+|+||||+|......          .++|||||||+|
T Consensus        90 ~t~~G~WkatG~dk~I~~~-g~~vG~KktLvFy~g~~p~g~kT~WvMhEY~L~~~~~~~~~~~~~~~~~~~wVlCrvf~K  168 (174)
T 3ulx_A           90 AAGNGYWKATGADKPVAPR-GRTLGIKKALVFYAGKAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNK  168 (174)
T ss_dssp             EETTEEEEECSCCEEECCS-SSCCEEEEEEEEEESSTTSCEEEEEEEEEEEECSCC-----------CCSSEEEEEEEES
T ss_pred             ecCCceEccCCCCcEEeeC-CcEEEEEEEEEEecCCCCCCCcCCeEEEEEEeCCCCCcccccccCCCCCCCEEEEEEEEc
Confidence            9999999999999999874 56999999999999999999999999999999987432          279999999998


Q ss_pred             CC
Q 013027          153 SG  154 (451)
Q Consensus       153 ~~  154 (451)
                      +.
T Consensus       169 ~~  170 (174)
T 3ulx_A          169 KN  170 (174)
T ss_dssp             CC
T ss_pred             CC
Confidence            75

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=4.5e-54  Score=397.23  Aligned_cols=149  Identities=42%  Similarity=0.826  Sum_probs=130.3

Q ss_pred             CCCCCceeECCChHHHHHHHHHHHHCCCCCCCCcccccCcCCCCCCCCCCccCCCCCCCceEEEEecCCCCCCCCCcccc
Q 013027            3 GHGVVGFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYFFNAPVPKYANSKRINR   82 (451)
Q Consensus         3 ~~LPpGFRF~PTDEELV~~YL~~Ki~G~plp~~vI~e~vDVY~~ePWdLP~~~~~~~~e~eWYFFS~r~rKy~nG~R~nR   82 (451)
                      ..|||||||+|||||||.|||++|+.|.+++.++|++ +|||++|||+||+.+..+  +.+|||||++++||++|.|+||
T Consensus        15 ~~lPpGfRF~PTDeELv~~YL~~K~~g~~~~~~~I~e-~Diy~~~Pw~Lp~~~~~g--~~ewyFFs~r~~k~~~g~R~~R   91 (171)
T 1ut7_A           15 LSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAE-IDLYKFDPWVLPNKALFG--EKEWYFFSPRDRKYPNGSRPNR   91 (171)
T ss_dssp             SCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEE-CCGGGSCGGGHHHHSSSC--SSEEEEEEECCC-------CCE
T ss_pred             cCCCCcceeCCChHHHHHHHHHHHhcCCCCCCCeEee-cccccCChhHhhchhhcC--CccEEEEeccccccCCCCcccc
Confidence            4799999999999999999999999999999999999 999999999999988765  8999999999999999999999


Q ss_pred             ccCCcEEEeeccCeeEEcCCCcEEEEEEEeEeeeCcCCCCcccCceEEEEEeCCCCC-----CCCceEEEEEEecCCC
Q 013027           83 TTNSGFWKSTCKDREIWDERGKKIGLKKNLVFHEGRVPNGIRTKWVMHEYHSLNASS-----YPKEFVLFRLKKKSGA  155 (451)
Q Consensus        83 atggGyWKatG~~K~I~~~~g~vVG~KKtLvFY~GrapkG~KT~WvMHEYrL~~~~~-----~~de~VLCRIykK~~~  155 (451)
                      +|++||||+||++|+|... +.+||+||+|+||.|++|++.||+|+||||+|.....     ..++|||||||+|+..
T Consensus        92 ~t~~G~Wk~tG~~k~I~~~-~~~vG~KktLvFy~g~~p~g~kT~WvMhEY~l~~~~~~~~~~~~~~~VlCrv~~k~~~  168 (171)
T 1ut7_A           92 VAGSGYWKATGTDKIISTE-GQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSS  168 (171)
T ss_dssp             EETTEEEEEEEEEEEEEET-TEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC--------CCEEEEEEEECC--
T ss_pred             cCCCCEEeccCCCceEEec-CcEEEEEEEEEEEcCcCCCCCcCCeEEEEEEcCCCccccCcccCCCEEEEEEEEcCCC
Confidence            9999999999999999974 4699999999999999999999999999999998753     1289999999999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	451
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	1e-46

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  156 bits (396), Expect = 1e-46
 Identities = 63/151 (41%), Positives = 93/151 (61%), Gaps = 9/151 (5%)

Query: 7   VGFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYF 66
            GFRF+PTDEE++  +L RK  G DF    IA+ +D+ K++PW LP ++   +++  WYF
Sbjct: 19  PGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAE-IDLYKFDPWVLPNKALFGEKE--WYF 75

Query: 67  FNAPVPKYANSKRINRTTNSGFWKSTCKDREIWDERGKKIGLKKNLVFHEGRVPNGIRTK 126
           F+    KY N  R NR   SG+WK+T  D+ I    G+++G+KK LVF+ G+ P G +T 
Sbjct: 76  FSPRDRKYPNGSRPNRVAGSGYWKATGTDKII-STEGQRVGIKKALVFYIGKAPKGTKTN 134

Query: 127 WVMHEYH-----SLNASSYPKEFVLFRLKKK 152
           W+MHEY        N S+   ++VL R+ KK
Sbjct: 135 WIMHEYRLIEPSRRNGSTKLDDWVLCRIYKK 165

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	451
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=9.1e-51  Score=369.56  Aligned_cols=147  Identities=42%  Similarity=0.831  Sum_probs=128.3

Q ss_pred             CCCCCceeECCChHHHHHHHHHHHHCCCCCCCCcccccCcCCCCCCCCCCccCCCCCCCceEEEEecCCCCCCCCCcccc
Q 013027            3 GHGVVGFRFHPTDEEIVTYFLERKMCGLDFPAHTIADVVDVCKYEPWELPQRSSMPKEDRVWYFFNAPVPKYANSKRINR   82 (451)
Q Consensus         3 ~~LPpGFRF~PTDEELV~~YL~~Ki~G~plp~~vI~e~vDVY~~ePWdLP~~~~~~~~e~eWYFFS~r~rKy~nG~R~nR   82 (451)
                      -+|||||||+|||||||.|||++|+.|.|++.++|++ +|||+++||+||+....+  +++||||+++.+++++|.|.+|
T Consensus        15 l~LPpG~RF~PTDeELv~~YL~~Ki~g~~l~~~~I~~-~Dvy~~~Pw~Lp~~~~~~--~~~wyFft~~~~k~~~g~r~~R   91 (166)
T d1ut7a_          15 LSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAE-IDLYKFDPWVLPNKALFG--EKEWYFFSPRDRKYPNGSRPNR   91 (166)
T ss_dssp             SCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEE-CCGGGSCGGGHHHHSSSC--SSEEEEEEECCC-------CCE
T ss_pred             ccCCCccccCCCcHHHHHHHHHHHHcCCCCCccccee-ccCCcCChhhccchhccC--cceEEEEeeeccccCCCCcccc
Confidence            3799999999999999999999999999999999999 999999999999877654  7899999999999999999999


Q ss_pred             ccCCcEEEeeccCeeEEcCCCcEEEEEEEeEeeeCcCCCCcccCceEEEEEeCCCCCCC-----CceEEEEEEecC
Q 013027           83 TTNSGFWKSTCKDREIWDERGKKIGLKKNLVFHEGRVPNGIRTKWVMHEYHSLNASSYP-----KEFVLFRLKKKS  153 (451)
Q Consensus        83 atggGyWKatG~~K~I~~~~g~vVG~KKtLvFY~GrapkG~KT~WvMHEYrL~~~~~~~-----de~VLCRIykK~  153 (451)
                      ++++|+||++|+++.|.+ +|.+||+||+|+||.++++++.+|+|+||||+|.......     ++|||||||+|+
T Consensus        92 ~~g~G~Wk~~g~~~~i~~-~g~~vG~kk~l~fy~~~~~~~~~t~W~M~EY~l~~~~~~~~~~~~~~~VLCrI~~Kk  166 (166)
T d1ut7a_          92 VAGSGYWKATGTDKIIST-EGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQ  166 (166)
T ss_dssp             EETTEEEEEEEEEEEEEE-TTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC--------CCEEEEEEEECC
T ss_pred             ccCCCEecccCCCceEec-CCcEEEEEEEEEEEecCCCCCCccCeEEEEEecCCcccccCccccCCEEEEEEEecC
Confidence            999999999999999987 4569999999999999999999999999999998875432     789999999984