Citrus Sinensis ID: 013044
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 451 | 2.2.26 [Sep-21-2011] | |||||||
| Q6AWX0 | 503 | D-xylose-proton symporter | yes | no | 0.929 | 0.833 | 0.728 | 1e-175 | |
| Q8L6Z8 | 503 | D-xylose-proton symporter | no | no | 0.926 | 0.831 | 0.682 | 1e-161 | |
| Q0WWW9 | 558 | D-xylose-proton symporter | no | no | 0.940 | 0.759 | 0.565 | 1e-132 | |
| C0SPB2 | 457 | Putative metabolite trans | yes | no | 0.722 | 0.713 | 0.334 | 5e-45 | |
| O34718 | 473 | Major myo-inositol transp | no | no | 0.751 | 0.716 | 0.304 | 8e-41 | |
| Q9BE72 | 621 | Solute carrier family 2, | N/A | no | 0.694 | 0.504 | 0.335 | 3e-40 | |
| Q8TD20 | 617 | Solute carrier family 2, | yes | no | 0.694 | 0.507 | 0.335 | 7e-40 | |
| Q8VZ80 | 539 | Polyol transporter 5 OS=A | no | no | 0.811 | 0.679 | 0.298 | 8e-40 | |
| Q94CI6 | 478 | Sugar transporter ERD6-li | no | no | 0.809 | 0.763 | 0.314 | 6e-39 | |
| Q96QE2 | 648 | Proton myo-inositol cotra | no | no | 0.711 | 0.495 | 0.324 | 2e-38 |
| >sp|Q6AWX0|XYLL2_ARATH D-xylose-proton symporter-like 2 OS=Arabidopsis thaliana GN=At5g17010 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 614 bits (1583), Expect = e-175, Method: Compositional matrix adjust.
Identities = 309/424 (72%), Positives = 364/424 (85%), Gaps = 5/424 (1%)
Query: 1 MATDPEQARARLSSFGKVGKSSGEIGSADEEPLIANGIRPSPENYSVSAAILPFLFPALG 60
MA DPEQ + S + GKSSGEI S + EPLI PENYSV AAILPFLFPALG
Sbjct: 1 MALDPEQQQPISSVSREFGKSSGEI-SPEREPLIKE--NHVPENYSVVAAILPFLFPALG 57
Query: 61 GLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADI 120
GLLYGY+IG+TSCATIS++SP+LSGISWY+LSSV++GL+TSGSLYGAL GSI+AF IAD+
Sbjct: 58 GLLYGYEIGATSCATISLQSPSLSGISWYNLSSVDVGLVTSGSLYGALFGSIVAFTIADV 117
Query: 121 LGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPM 180
+GRR+ELILAALLYLVGALVTALAP + ++++GR ++G+ +GLAMHAAPMYIAETAP+P+
Sbjct: 118 IGRRKELILAALLYLVGALVTALAPTYSVLIIGRVIYGVSVGLAMHAAPMYIAETAPSPI 177
Query: 181 RGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRW 240
RGQL+SLKEFFIVLGMVGGYGIGSL V++ +GWRYMY S PLAVIMG+GMWWLPASPRW
Sbjct: 178 RGQLVSLKEFFIVLGMVGGYGIGSLTVNVHSGWRYMYATSVPLAVIMGIGMWWLPASPRW 237
Query: 241 LLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREV 300
LLL ++ KG++++ RE+AI LC LRG + DSA +V+EIL EL++VGEDKEV+ E+
Sbjct: 238 LLLRVIQGKGNVENQREAAIKSLCCLRGPAFVDSAAEQVNEILAELTFVGEDKEVTFGEL 297
Query: 301 FHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIM 360
F GKCLKALIIG GLVLFQQITGQPSVLYYA SILQ+AGFSAA DATRVSILLGL KLIM
Sbjct: 298 FQGKCLKALIIGGGLVLFQQITGQPSVLYYAPSILQTAGFSAAGDATRVSILLGLLKLIM 357
Query: 361 TGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIK 420
TG+AV+V++RLGRRPLLLGGV G+V+SLFLLGSYYLF P VAVVALLLYVGCYQ+
Sbjct: 358 TGVAVVVIDRLGRRPLLLGGVGGMVVSLFLLGSYYLFFSASPVVAVVALLLYVGCYQL-- 415
Query: 421 NFNP 424
+F P
Sbjct: 416 SFGP 419
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Arabidopsis thaliana (taxid: 3702) |
| >sp|Q8L6Z8|XYLL1_ARATH D-xylose-proton symporter-like 1 OS=Arabidopsis thaliana GN=At3g03090 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 568 bits (1465), Expect = e-161, Method: Compositional matrix adjust.
Identities = 290/425 (68%), Positives = 353/425 (83%), Gaps = 7/425 (1%)
Query: 1 MATDPEQARARLSSFGKV-GKSSGEIGSADEEPLIANGIRPSPENYSVSAAILPFLFPAL 59
M DPE +SS G+V G SS +A++EPL+ SPENYSV AAI PFLFPAL
Sbjct: 1 MGFDPENQS--ISSVGQVVGDSSSGGITAEKEPLLKE--NHSPENYSVLAAIPPFLFPAL 56
Query: 60 GGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIAD 119
G LL+GY+IG+TSCA +S++SPTLSGISWYDLSSV++G+ITSGSLYGALIGSI+AF++AD
Sbjct: 57 GALLFGYEIGATSCAIMSLKSPTLSGISWYDLSSVDVGIITSGSLYGALIGSIVAFSVAD 116
Query: 120 ILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTP 179
I+GRR+ELILAA LYLVGA+VT +AP F I+++GR +G+GIGL MHAAPMYIAETAP+
Sbjct: 117 IIGRRKELILAAFLYLVGAIVTVVAPVFSILIIGRVTYGMGIGLTMHAAPMYIAETAPSQ 176
Query: 180 MRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPR 239
+RG++ISLKEF VLGMVGGYGIGSL + +++GWRYMY P VIMG GM WLPASPR
Sbjct: 177 IRGRMISLKEFSTVLGMVGGYGIGSLWITVISGWRYMYATILPFPVIMGTGMCWLPASPR 236
Query: 240 WLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLRE 299
WLLL A++ +G+ ++L+++AI LCRLRG I DSA +V+EIL ELS VGEDKE + E
Sbjct: 237 WLLLRALQGQGNGENLQQAAIRSLCRLRGSVIADSAAEQVNEILAELSLVGEDKEATFGE 296
Query: 300 VFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLI 359
+F GKCLKAL I GLVLFQQITGQPSVLYYA SILQ+AGFSAA+DATR+SILLGL KL+
Sbjct: 297 LFRGKCLKALTIAGGLVLFQQITGQPSVLYYAPSILQTAGFSAAADATRISILLGLLKLV 356
Query: 360 MTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVI 419
MTG++V+V++R+GRRPLLL GVSG+VISLFLLGSYY+F +VPAVAV ALLLYVGCYQ+
Sbjct: 357 MTGVSVIVIDRVGRRPLLLCGVSGMVISLFLLGSYYMFYKNVPAVAVAALLLYVGCYQL- 415
Query: 420 KNFNP 424
+F P
Sbjct: 416 -SFGP 419
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Arabidopsis thaliana (taxid: 3702) |
| >sp|Q0WWW9|XYLL3_ARATH D-xylose-proton symporter-like 3, chloroplastic OS=Arabidopsis thaliana GN=At5g59250 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 472 bits (1215), Expect = e-132, Method: Compositional matrix adjust.
Identities = 249/440 (56%), Positives = 328/440 (74%), Gaps = 16/440 (3%)
Query: 3 TDPEQARARLSSFGKVG-KSSGEIGSADEEPLIANGI-RPSPENYSVSAAILPFLFPALG 60
+ P R +VG ++ GE + E +A+ + +PE++S S+ ILPF+FPALG
Sbjct: 52 SKPGLVTTRYRHIFQVGAETGGEFADSGE---VADSLASDAPESFSWSSVILPFIFPALG 108
Query: 61 GLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADI 120
GLL+GYDIG+TS AT+S++SP LSG +W++ S V++GL+ SGSLYGAL+GSI + +AD
Sbjct: 109 GLLFGYDIGATSGATLSLQSPALSGTTWFNFSPVQLGLVVSGSLYGALLGSISVYGVADF 168
Query: 121 LGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPM 180
LGRRRELI+AA+LYL+G+L+T APD I++VGR ++G GIGLAMH AP+YIAET P+ +
Sbjct: 169 LGRRRELIIAAVLYLLGSLITGCAPDLNILLVGRLLYGFGIGLAMHGAPLYIAETCPSQI 228
Query: 181 RGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRW 240
RG LISLKE FIVLG++ G+ +GS +D+V GWRYMYG TP+A++MG+GMW LPASPRW
Sbjct: 229 RGTLISLKELFIVLGILLGFSVGSFQIDVVGGWRYMYGFGTPVALLMGLGMWSLPASPRW 288
Query: 241 LLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTE-VDEILTELSYVGEDKEV--SL 297
LLL A++ KG +Q+ +E A+ L +LRG+ GD + VD+ + ED++ +
Sbjct: 289 LLLRAVQGKGQLQEYKEKAMLALSKLRGRPPGDKISEKLVDDAYLSVKTAYEDEKSGGNF 348
Query: 298 REVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFK 357
EVF G LKAL IG GLVLFQQITGQPSVLYYA SILQ+AGFSAA+DATRVS+++G+FK
Sbjct: 349 LEVFQGPNLKALTIGGGLVLFQQITGQPSVLYYAGSILQTAGFSAAADATRVSVIIGVFK 408
Query: 358 LIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQ 417
L+MT +AV V+ LGRRPLL+GGVSGI +SLFLL +YY FL P VAV ALLLYVGCYQ
Sbjct: 409 LLMTWVAVAKVDDLGRRPLLIGGVSGIALSLFLLSAYYKFLGGFPLVAVGALLLYVGCYQ 468
Query: 418 VIKNFNP------SKIYHFR 431
+ +F P S+I+ R
Sbjct: 469 I--SFGPISWLMVSEIFPLR 486
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Arabidopsis thaliana (taxid: 3702) |
| >sp|C0SPB2|YWTG_BACSU Putative metabolite transport protein YwtG OS=Bacillus subtilis (strain 168) GN=ywtG PE=3 SV=1 | Back alignment and function description |
|---|
Score = 182 bits (461), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 118/353 (33%), Positives = 192/353 (54%), Gaps = 27/353 (7%)
Query: 54 FLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSIL 113
+ F ALGG LYGYD G S A + ++ L++ GL+ S L GA++GS
Sbjct: 10 YFFGALGGALYGYDTGVISGAILFMKKE-------LGLNAFTEGLVVSSLLVGAILGSGA 62
Query: 114 AFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIA 173
A + D GR++ ++ AALL+ +G L ALAP+ +MV+ R + G+ +G + P+Y++
Sbjct: 63 AGKLTDRFGRKKAIMAAALLFCIGGLGVALAPNTGVMVLFRIILGLAVGTSTTIVPLYLS 122
Query: 174 ETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW 233
E AP RG L SL + I +G++ Y + + D A WR+M G + ++++ +G+ +
Sbjct: 123 ELAPKHKRGALSSLNQLMITVGILLSYIVNYIFADAEA-WRWMLGLAAVPSLLLLIGILF 181
Query: 234 LPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDK 293
+P SPRWL + K A L +LRG ++D+ + ++ +
Sbjct: 182 MPESPRWLFTNGEESK---------AKKILEKLRGTK-------DIDQEIHDIKEAEKQD 225
Query: 294 EVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGF-SAASDATRVSIL 352
E L+E+F ALI G GL QQ G +++YYA + GF ++AS V I
Sbjct: 226 EGGLKELFDPWVRPALIAGLGLAFLQQFIGTNTIIYYAPKTFTNVGFGNSASILGTVGI- 284
Query: 353 LGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVA 405
G ++MT +A+ +++++GR+PLLL G +G+VISL +L LF D+ PA +
Sbjct: 285 -GTVNVLMTLVAIKIIDKIGRKPLLLFGNAGMVISLIVLALVNLFFDNTPAAS 336
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Bacillus subtilis (strain 168) (taxid: 224308) |
| >sp|O34718|IOLT_BACSU Major myo-inositol transporter IolT OS=Bacillus subtilis (strain 168) GN=iolT PE=2 SV=1 | Back alignment and function description |
|---|
Score = 168 bits (425), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 196/365 (53%), Gaps = 26/365 (7%)
Query: 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILA 114
L GGLL+GYD G + A P + +L++ GL+TS L+GA +G++
Sbjct: 16 LVSTFGGLLFGYDTGVLNGAL-----PYMGEPDQLNLNAFTEGLVTSSLLFGAALGAVFG 70
Query: 115 FNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAE 174
++D GRR+ ++ A+++ + + AP+ +M++ RFV GI +G A P Y+AE
Sbjct: 71 GRMSDFNGRRKNILFLAVIFFISTIGCTFAPNVTVMIISRFVLGIAVGGASVTVPAYLAE 130
Query: 175 TAPTPMRGQLISLKEFFIVLGMVGGYG----IGSLLVDLVAGWRYMYGASTPLAVIMGMG 230
+P RG++++ E IV G + + +G+ + D WR+M ++ A+ + G
Sbjct: 131 MSPVESRGRMVTQNELMIVSGQLLAFVFNAILGTTMGDNSHVWRFMLVIASLPALFLFFG 190
Query: 231 MWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVG 290
M +P SPRWL+ KG +E A+ L ++R + A E+ EI E ++
Sbjct: 191 MIRMPESPRWLV-----SKGR----KEDALRVLKKIRDE---KRAAAELQEI--EFAFKK 236
Query: 291 EDK--EVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATR 348
ED+ + + +++ + + IG G+ + QQITG S++YY IL+++GF + A
Sbjct: 237 EDQLEKATFKDLSVPWVRRIVFIGLGIAIVQQITGVNSIMYYGTEILRNSGFQTEA-ALI 295
Query: 349 VSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVA 408
+I G+ ++ T + + ++ R+GRRP+L+ G+ G +L L+G + L L+ PA+ V
Sbjct: 296 GNIANGVISVLATFVGIWLLGRVGRRPMLMTGLIGTTTALLLIGIFSLVLEGSPALPYVV 355
Query: 409 LLLYV 413
L L V
Sbjct: 356 LSLTV 360
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Major myo-inositol uptake transporter. Bacillus subtilis (strain 168) (taxid: 224308) |
| >sp|Q9BE72|GTR12_MACFA Solute carrier family 2, facilitated glucose transporter member 12 OS=Macaca fascicularis GN=SLC2A12 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 166 bits (420), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/337 (33%), Positives = 182/337 (54%), Gaps = 24/337 (7%)
Query: 58 ALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNI 117
A+ GLL GY++G S A + I++ LS E ++ S L GAL+ S+ +
Sbjct: 52 AVSGLLVGYELGIISGALLQIKT-------LLTLSCHEQEMVVSSLLIGALLASLTGGVL 104
Query: 118 ADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAP 177
D GRR +IL++ L +G+LV L+ + +++VGR G+ I L+ A +YIAE AP
Sbjct: 105 IDRYGRRTAIILSSCLLGLGSLVLILSLSYTVLIVGRIAIGVSISLSSIATCVYIAEIAP 164
Query: 178 TPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPAS 237
RG L+SL E IV+G++ Y ++ GW+YM+G PL ++ + M++LP S
Sbjct: 165 QHRRGLLVSLNELMIVIGILSAYISNYAFANVFHGWKYMFGLVIPLGILQAIAMYFLPPS 224
Query: 238 PRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSL 297
PR+L+ M+ +A L RLR S +E+ S + ++ + S
Sbjct: 225 PRFLV---------MKGQEGAASKVLGRLRALS------DATEELTVIKSSLKDEYQYSF 269
Query: 298 REVFHGK--CLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGL 355
++F K ++IG LV F QITGQP++L+YA+++L+S GF + A+ S +G+
Sbjct: 270 WDLFRSKDNMRTRIMIGLTLVFFVQITGQPNILFYASTVLKSVGFQSNEAASLASTGVGV 329
Query: 356 FKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLG 392
K+I T A L+V+ +G + L G S + SL +G
Sbjct: 330 VKVISTIPATLLVDHVGSKTFLCIGSSVMAASLVTMG 366
|
Facilitative glucose transporter. Macaca fascicularis (taxid: 9541) |
| >sp|Q8TD20|GTR12_HUMAN Solute carrier family 2, facilitated glucose transporter member 12 OS=Homo sapiens GN=SLC2A12 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 165 bits (417), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 113/337 (33%), Positives = 182/337 (54%), Gaps = 24/337 (7%)
Query: 58 ALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNI 117
A+ GLL GY++G S A + I++ LS E ++ S + GAL+ S+ +
Sbjct: 48 AVSGLLVGYELGIISGALLQIKT-------LLALSCHEQEMVVSSLVIGALLASLTGGVL 100
Query: 118 ADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAP 177
D GRR +IL++ L +G+LV L+ + +++VGR G+ I L+ A +YIAE AP
Sbjct: 101 IDRYGRRTAIILSSCLLGLGSLVLILSLSYTVLIVGRIAIGVSISLSSIATCVYIAEIAP 160
Query: 178 TPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPAS 237
RG L+SL E IV+G++ Y ++ GW+YM+G PL V+ + M++LP S
Sbjct: 161 QHRRGLLVSLNELMIVIGILSAYISNYAFANVFHGWKYMFGLVIPLGVLQAIAMYFLPPS 220
Query: 238 PRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSL 297
PR+L+ M+ +A L RLR S +E+ S + ++ + S
Sbjct: 221 PRFLV---------MKGQEGAASKVLGRLRALS------DTTEELTVIKSSLKDEYQYSF 265
Query: 298 REVFHGK--CLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGL 355
++F K ++IG LV F QITGQP++L+YA+++L+S GF + A+ S +G+
Sbjct: 266 WDLFRSKDNMRTRIMIGLTLVFFVQITGQPNILFYASTVLKSVGFQSNEAASLASTGVGV 325
Query: 356 FKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLG 392
K+I T A L+V+ +G + L G S + SL +G
Sbjct: 326 VKVISTIPATLLVDHVGSKTFLCIGSSVMAASLVTMG 362
|
Facilitative glucose transporter. Homo sapiens (taxid: 9606) |
| >sp|Q8VZ80|PLT5_ARATH Polyol transporter 5 OS=Arabidopsis thaliana GN=PLT5 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 165 bits (417), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 199/395 (50%), Gaps = 29/395 (7%)
Query: 40 PSPENYSVSAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLI 99
P NY+ + AIL ++ +L GYDIG S A I I+ ++ ++IG++
Sbjct: 30 PKRNNYAFACAILA----SMTSILLGYDIGVMSGAMIYIKRD-------LKINDLQIGIL 78
Query: 100 TSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGI 159
+LIGS A +D +GRR ++LA ++ GA++ L+P++ ++ GRF+ GI
Sbjct: 79 AGSLNIYSLIGSCAAGRTSDWIGRRYTIVLAGAIFFAGAILMGLSPNYAFLMFGRFIAGI 138
Query: 160 GIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGY--GIGSLLVDLVAGWRYMY 217
G+G A+ AP+Y AE +P RG L S E FI G++ GY + + L GWR M
Sbjct: 139 GVGYALMIAPVYTAEVSPASSRGFLNSFPEVFINAGIMLGYVSNLAFSNLPLKVGWRLML 198
Query: 218 GASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDL--RESAISCLCRLRGQSIGDSA 275
G +VI+ +G+ +P SPRWL++ R GD + + + S LR + I +A
Sbjct: 199 GIGAVPSVILAIGVLAMPESPRWLVMQG--RLGDAKRVLDKTSDSPTEATLRLEDIKHAA 256
Query: 276 --PTEVDEILTELSYVGEDKEVSLREVF---HGKCLKALIIGAGLVLFQQITGQPSVLYY 330
P + + + ++S E RE+ + +I G+ FQQ +G +V+ +
Sbjct: 257 GIPADCHDDVVQVSRRNSHGEGVWRELLIRPTPAVRRVMIAAIGIHFFQQASGIDAVVLF 316
Query: 331 AASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFL 390
+ I ++AG ++ +G+ K +A +++R+GRRPLLL V G+V+SL
Sbjct: 317 SPRIFKTAGLKTDHQQLLATVAVGVVKTSFILVATFLLDRIGRRPLLLTSVGGMVLSLAA 376
Query: 391 LGSYYLFLDDVPA-------VAVVALLLYVGCYQV 418
LG+ +D VA+ ++ YV + +
Sbjct: 377 LGTSLTIIDQSEKKVMWAVVVAIATVMTYVATFSI 411
|
Plasma membrane broad-spectrum sugar-proton symporter. Mediates the uptake of linear polyols such as sorbitol, xylitol, erythritol or glycerol. Can transport the cyclic polyol myo-inositol and different hexoses, pentoses (including ribose), tetroses and sugar alcohols. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q94CI6|EDL18_ARATH Sugar transporter ERD6-like 18 OS=Arabidopsis thaliana GN=SFP2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 162 bits (409), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 125/398 (31%), Positives = 191/398 (47%), Gaps = 33/398 (8%)
Query: 27 SADEEPLIANGIRPSPENYSVSAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGI 86
S +E L E + IL G +G +G TS A I I
Sbjct: 12 SIEERLLQLKNQNDDSECRITACVILSTFIAVCGSFSFGVSLGYTSGAEIGIMKD----- 66
Query: 87 SWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPD 146
DLS + S S GA IG++ + +A ILGRR+ + ++ LL ++G A A D
Sbjct: 67 --LDLSIAQFSAFASLSTLGAAIGALFSGKMAIILGRRKTMWVSDLLCIIGWFSIAFAKD 124
Query: 147 FIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLL 206
+ + GR GIG+GL + P+YIAE +P +RG + G+ Y G+ L
Sbjct: 125 VMWLNFGRISSGIGLGLISYVVPVYIAEISPKHVRGTFTFTNQLLQNSGLAMVYFSGNFL 184
Query: 207 VDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRL 266
WR + I +G++++P SPRWL + G ++L S L RL
Sbjct: 185 -----NWRILALLGALPCFIQVIGLFFVPESPRWL-----AKVGSDKELENS----LLRL 230
Query: 267 RGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPS 326
RG + S E++T++ V D + S ++F K L++G GL+L QQ +G +
Sbjct: 231 RGGNADISREASDIEVMTKM--VENDSKSSFCDLFQRKYRYTLVVGIGLMLIQQFSGSSA 288
Query: 327 VLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVI 386
VL YA++IL+ AGFS +T LLGLF + + V++V++ GRRPLLL VSG+ I
Sbjct: 289 VLSYASTILRKAGFSVTIGST----LLGLFMIPKAMIGVILVDKWGRRPLLLTSVSGMCI 344
Query: 387 SLFLLGSYY------LFLDDVPAVAVVALLLYVGCYQV 418
+ L+G + L + P + + LY+G Y +
Sbjct: 345 TSMLIGVAFTLQKMQLLPELTPVFTFICVTLYIGTYAI 382
|
Sugar transporter. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q96QE2|MYCT_HUMAN Proton myo-inositol cotransporter OS=Homo sapiens GN=SLC2A13 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/339 (32%), Positives = 178/339 (52%), Gaps = 18/339 (5%)
Query: 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILA 114
+F ALGG L+GYD G S A + ++ W +L + S ++ A + ++
Sbjct: 86 VFSALGGFLFGYDTGVVSGAMLLLKRQLSLDALWQEL-------LVSSTVGAAAVSALAG 138
Query: 115 FNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAE 174
+ + GRR ++LA+ L+ G+ V A A + ++ GR V G+GIG+A P+YIAE
Sbjct: 139 GALNGVFGRRAAILLASALFTAGSAVLAAANNKETLLAGRLVVGLGIGIASMTVPVYIAE 198
Query: 175 TAPTPMRGQLISLKEFFIVLGMVGGYGI-GSLLVDLVAGWRYMYGASTPLAVIMGMGMWW 233
+P +RG+L+++ FI G + G+ GWRYM G + AVI G +
Sbjct: 199 VSPPNLRGRLVTINTLFITGGQFFASVVDGAFSYLQKDGWRYMLGLAAVPAVIQFFGFLF 258
Query: 234 LPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRG-QSIGDSAPTEVDEILTELSYVGED 292
LP SPRWL+ +KG Q R L ++RG Q+I + + + I E VG
Sbjct: 259 LPESPRWLI-----QKGQTQKARR----ILSQMRGNQTIDEEYDSIKNNIEEEEKEVGSA 309
Query: 293 KEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSIL 352
V R + + +ALI+G GL +FQQ++G +++YY+A+ILQ +G A ++ +
Sbjct: 310 GPVICRMLSYPPTRRALIVGCGLQMFQQLSGINTIMYYSATILQMSGVEDDRLAIWLASV 369
Query: 353 LGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLL 391
I T + V +VE++GRR L G ++G ++L +L
Sbjct: 370 TAFTNFIFTLVGVWLVEKVGRRKLTFGSLAGTTVALIIL 408
|
H(+)-myo-inositol cotransporter. Can also transport related stereoisomers. Homo sapiens (taxid: 9606) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 451 | ||||||
| 224144970 | 502 | predicted protein [Populus trichocarpa] | 0.944 | 0.848 | 0.812 | 0.0 | |
| 118486465 | 502 | unknown [Populus trichocarpa] | 0.944 | 0.848 | 0.812 | 0.0 | |
| 255557987 | 502 | sugar transporter, putative [Ricinus com | 0.940 | 0.844 | 0.759 | 0.0 | |
| 356538461 | 501 | PREDICTED: D-xylose-proton symporter-lik | 0.924 | 0.832 | 0.759 | 1e-178 | |
| 449438795 | 502 | PREDICTED: D-xylose-proton symporter-lik | 0.924 | 0.830 | 0.742 | 1e-177 | |
| 449526179 | 459 | PREDICTED: D-xylose-proton symporter-lik | 0.924 | 0.908 | 0.742 | 1e-177 | |
| 357474255 | 501 | D-xylose-proton symporter-like protein [ | 0.924 | 0.832 | 0.740 | 1e-177 | |
| 388501928 | 501 | unknown [Medicago truncatula] | 0.924 | 0.832 | 0.738 | 1e-177 | |
| 225454803 | 500 | PREDICTED: D-xylose-proton symporter-lik | 0.937 | 0.846 | 0.772 | 1e-176 | |
| 297811841 | 502 | sugar transporter family protein [Arabid | 0.924 | 0.830 | 0.736 | 1e-175 |
| >gi|224144970|ref|XP_002325479.1| predicted protein [Populus trichocarpa] gi|222862354|gb|EEE99860.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 684 bits (1766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/438 (81%), Positives = 390/438 (89%), Gaps = 12/438 (2%)
Query: 1 MATDPEQARARLSSFGKVGKSSGEIGSADEEPLIANGIRPSPENYSVSAAILPFLFPALG 60
MA DPEQ LSS GKVGKSSGEIG EEPL+ GI S ENYS+++AI PFLFPALG
Sbjct: 1 MAPDPEQPT--LSSLGKVGKSSGEIGGV-EEPLLNGGIHTS-ENYSLASAIFPFLFPALG 56
Query: 61 GLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADI 120
GLLYGYDIGSTSCATISI+S TLSGISWY+L+SV+IGLITSGSLYGALIGS+LAFNIAD
Sbjct: 57 GLLYGYDIGSTSCATISIQSATLSGISWYNLNSVDIGLITSGSLYGALIGSVLAFNIADF 116
Query: 121 LGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPM 180
LGRRRELILAA LYLVGALVTALAP F +MV+GRFVFGIGIGLAMHAAPMYIAETAP+ +
Sbjct: 117 LGRRRELILAAFLYLVGALVTALAPAFAVMVIGRFVFGIGIGLAMHAAPMYIAETAPSHI 176
Query: 181 RGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRW 240
RGQLISLKEFFIVLGMVGGYGIGSLLVD VAGWRYMY ASTPLAVIMG+GMWWLPASPRW
Sbjct: 177 RGQLISLKEFFIVLGMVGGYGIGSLLVDTVAGWRYMYVASTPLAVIMGIGMWWLPASPRW 236
Query: 241 LLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREV 300
LLL A++ KG MQ+LRE+AI CLCRLRG++IGD+AP +VDEIL EL+ VGE+KEV+L EV
Sbjct: 237 LLLRAIQGKGSMQELRETAICCLCRLRGEAIGDTAPAKVDEILAELAVVGEEKEVTLAEV 296
Query: 301 FHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIM 360
F GKCLKAL IGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIM
Sbjct: 297 FRGKCLKALTIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIM 356
Query: 361 TGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIK 420
TG AVLVV+RLGRRPLLLGGVSG+VISLFLLGSYY+FLD+ P VAV ALLLYVGCYQ+
Sbjct: 357 TGTAVLVVDRLGRRPLLLGGVSGMVISLFLLGSYYIFLDNAPVVAVAALLLYVGCYQL-- 414
Query: 421 NFNP------SKIYHFRI 432
+F P S+I+ R+
Sbjct: 415 SFGPIGWLMISEIFPLRL 432
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|118486465|gb|ABK95072.1| unknown [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/438 (81%), Positives = 389/438 (88%), Gaps = 12/438 (2%)
Query: 1 MATDPEQARARLSSFGKVGKSSGEIGSADEEPLIANGIRPSPENYSVSAAILPFLFPALG 60
MA DPEQ LSS GKVGKSSGEIG EEPL+ GI S ENYS+ +AI PFLFPALG
Sbjct: 1 MAPDPEQPT--LSSLGKVGKSSGEIGGV-EEPLLNGGIHTS-ENYSLVSAIFPFLFPALG 56
Query: 61 GLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADI 120
GLLYGYDIGSTSCATISI+S TLSGISWY+L+SV+IGLITSGSLYGALIGS+LAFNIAD
Sbjct: 57 GLLYGYDIGSTSCATISIKSATLSGISWYNLNSVDIGLITSGSLYGALIGSVLAFNIADF 116
Query: 121 LGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPM 180
LGRRRELILAA LYLVGALVTALAP F +MV+GRFVFGIGIGLAMHAAPMYIAETAP+ +
Sbjct: 117 LGRRRELILAAFLYLVGALVTALAPAFAVMVIGRFVFGIGIGLAMHAAPMYIAETAPSHI 176
Query: 181 RGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRW 240
RGQLISLKEFFIVLGMVGGYGIGSLLVD VAGWRYMY ASTPLAVIMG+GMWWLPASPRW
Sbjct: 177 RGQLISLKEFFIVLGMVGGYGIGSLLVDTVAGWRYMYVASTPLAVIMGIGMWWLPASPRW 236
Query: 241 LLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREV 300
LLL A++ KG MQ+LRE+AI CLCRLRG++IGD+AP +VDEIL EL+ VGE+KEV+L EV
Sbjct: 237 LLLRAIQGKGSMQELRETAICCLCRLRGEAIGDTAPAKVDEILAELAVVGEEKEVTLAEV 296
Query: 301 FHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIM 360
F GKCLKAL IGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIM
Sbjct: 297 FRGKCLKALTIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIM 356
Query: 361 TGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIK 420
TG AVLVV+RLGRRPLLLGGVSG+VISLFLLGSYY+FLD+ P VAV ALLLYVGCYQ+
Sbjct: 357 TGTAVLVVDRLGRRPLLLGGVSGMVISLFLLGSYYIFLDNAPVVAVAALLLYVGCYQL-- 414
Query: 421 NFNP------SKIYHFRI 432
+F P S+I+ R+
Sbjct: 415 SFGPIGWLMISEIFPLRL 432
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255557987|ref|XP_002520022.1| sugar transporter, putative [Ricinus communis] gi|223540786|gb|EEF42346.1| sugar transporter, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/437 (75%), Positives = 380/437 (86%), Gaps = 13/437 (2%)
Query: 2 ATDPEQARARLSSFGKVGKSSGEIGSADEEPLIANGIRPSPENYSVSAAILPFLFPALGG 61
ATD EQ SS GKVGKSSGEI A EEPL+ G S E YS+ AA+LPFLFPALGG
Sbjct: 3 ATDLEQPS--FSSLGKVGKSSGEIDGA-EEPLLNGG--SSSEYYSILAAVLPFLFPALGG 57
Query: 62 LLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADIL 121
LLYGYDIG+TSCATI+IES T SGISWY+L++V++GLITSGSLYGALIGS++AFNIAD L
Sbjct: 58 LLYGYDIGATSCATITIESATSSGISWYNLNAVQLGLITSGSLYGALIGSVVAFNIADFL 117
Query: 122 GRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMR 181
GRRRELI+AALLYLVGALVT LAPDF++MV+GRFV+GIGIGLAMHAAPMYIAETAP+ +R
Sbjct: 118 GRRRELIVAALLYLVGALVTGLAPDFVVMVIGRFVYGIGIGLAMHAAPMYIAETAPSQIR 177
Query: 182 GQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWL 241
G+LISLKEFFIVLGMV GYG+GSLLVD+V GWRYMY AS PLAVIMG+GMW LP SPRW+
Sbjct: 178 GRLISLKEFFIVLGMVAGYGVGSLLVDIVRGWRYMYVASAPLAVIMGVGMWCLPQSPRWI 237
Query: 242 LLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVF 301
LLCAM+ KG+MQDL+E+AI CLC+LRG +IGD+AP V+E+L+EL++VGE+KE SLR++F
Sbjct: 238 LLCAMQGKGNMQDLKETAICCLCKLRGGAIGDAAPALVEEMLSELAFVGEEKETSLRDLF 297
Query: 302 HGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMT 361
GKCLKAL IGAGLV+FQQITGQPSVLYYA SI QSAGFSAASDATRVSILLGL KLIMT
Sbjct: 298 KGKCLKALTIGAGLVIFQQITGQPSVLYYAGSIFQSAGFSAASDATRVSILLGLLKLIMT 357
Query: 362 GLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKN 421
G AV+ V+RLGRRPLLL GVSG+ ISLFLLGSYY FL+DVPAVAVVALLLYVGCYQ +
Sbjct: 358 GGAVVAVDRLGRRPLLLTGVSGMAISLFLLGSYYRFLNDVPAVAVVALLLYVGCYQF--S 415
Query: 422 FNP------SKIYHFRI 432
F P S+I+ R+
Sbjct: 416 FGPIGWLMISEIFPLRL 432
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356538461|ref|XP_003537722.1| PREDICTED: D-xylose-proton symporter-like 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 629 bits (1622), Expect = e-178, Method: Compositional matrix adjust.
Identities = 322/424 (75%), Positives = 371/424 (87%), Gaps = 7/424 (1%)
Query: 1 MATDPEQARARLSSFGKVGKSSGEIGSADEEPLIANGIRPSPENYSVSAAILPFLFPALG 60
MA+DPEQ SSF K +S GEIGSA E PL+ NG+ S E+YSVSAAILPFLFPALG
Sbjct: 1 MASDPEQPAH--SSFAKEARSGGEIGSAIE-PLL-NGVHDS-ESYSVSAAILPFLFPALG 55
Query: 61 GLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADI 120
GLL+GYDIG+TS ATISI+SPTLSG+SWY LSSVEIGL+TSGSLYGALIGS+LAFN+AD
Sbjct: 56 GLLFGYDIGATSSATISIQSPTLSGVSWYKLSSVEIGLLTSGSLYGALIGSLLAFNVADF 115
Query: 121 LGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPM 180
LGRR+ELI AA++YLVGALVTALAP+F ++V+GR VFGIGIGLAMHAAPMYIAETAPTP+
Sbjct: 116 LGRRKELIGAAVVYLVGALVTALAPNFPVLVLGRLVFGIGIGLAMHAAPMYIAETAPTPI 175
Query: 181 RGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRW 240
RGQLISLKEFFIVLGMV GYGIGSL V+ V+GWRYMYG S+P+A+IMG+GMWWLPASPRW
Sbjct: 176 RGQLISLKEFFIVLGMVAGYGIGSLFVETVSGWRYMYGVSSPVAIIMGVGMWWLPASPRW 235
Query: 241 LLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREV 300
LLL A++ KGD+Q+ ++ AI LC+LRGQ+ DS P +VDEIL ELSY+GE+KE + E+
Sbjct: 236 LLLRAIQGKGDVQNSKDIAIRSLCQLRGQAFYDSVPWQVDEILAELSYLGEEKEATFGEL 295
Query: 301 FHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIM 360
F GKCLKAL IG+GLVLFQQITGQPSVLYYA SI QSAGFS ASDATRVSILLG FKLIM
Sbjct: 296 FQGKCLKALWIGSGLVLFQQITGQPSVLYYAGSIFQSAGFSGASDATRVSILLGFFKLIM 355
Query: 361 TGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIK 420
TG+AV+VV++LGRRPLLLGGVSGIVISLF LGSYY+FLD+ P VAV+ LLLYVG YQ+
Sbjct: 356 TGVAVVVVDKLGRRPLLLGGVSGIVISLFFLGSYYIFLDNSPVVAVIGLLLYVGSYQI-- 413
Query: 421 NFNP 424
+F P
Sbjct: 414 SFGP 417
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449438795|ref|XP_004137173.1| PREDICTED: D-xylose-proton symporter-like 2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 628 bits (1620), Expect = e-177, Method: Compositional matrix adjust.
Identities = 317/427 (74%), Positives = 375/427 (87%), Gaps = 10/427 (2%)
Query: 12 LSSFGKVGKSSGEIGSADEEPLIANGIRPSPENYSVSAAILPFLFPALGGLLYGYDIGST 71
LSS GKVG+SSGEI + EEPLI+ + S EN+S AAILPFLFPALGGLLYGYDIG+T
Sbjct: 10 LSSLGKVGQSSGEIDNV-EEPLISVEFKHS-ENFSARAAILPFLFPALGGLLYGYDIGAT 67
Query: 72 SCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAA 131
SCATIS++S + SGISWY+LSSVE+GL+TSGSLYGALIGS+LAFN+AD LGRRRELIL+A
Sbjct: 68 SCATISLQSASSSGISWYNLSSVEVGLVTSGSLYGALIGSVLAFNVADFLGRRRELILSA 127
Query: 132 LLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFF 191
L+YLVGA++T LAP+F+I+++GR + G GIGLAMHAAPMYIAET+P+ +RGQ+ISLKEFF
Sbjct: 128 LMYLVGAIITGLAPNFVILIIGRIISGTGIGLAMHAAPMYIAETSPSKIRGQMISLKEFF 187
Query: 192 IVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGD 251
IVLGMV GY IGSLLV++VAGWRY+Y A+TP+A++MG+GMWWLP+SPRWLLLCA++RKG+
Sbjct: 188 IVLGMVLGYSIGSLLVEVVAGWRYIYAANTPIALVMGVGMWWLPSSPRWLLLCAIQRKGN 247
Query: 252 MQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALII 311
M DL+E AISCL RLRG IG++A EV+EIL ELS++GE +E S+ E+F GKCLKALII
Sbjct: 248 MADLKERAISCLHRLRGAVIGETASEEVNEILEELSFLGESEEASIGEIFQGKCLKALII 307
Query: 312 GAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERL 371
GAGLVLFQQITGQPSVLYYA SI QSAGFSAA+DATRVSILLGL KLIMTG AVLVV+RL
Sbjct: 308 GAGLVLFQQITGQPSVLYYAPSIFQSAGFSAAADATRVSILLGLLKLIMTGAAVLVVDRL 367
Query: 372 GRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNP------S 425
GRRPLLLGGVSGI ISLFLLGSYYLFL +VPAVAVVALLLYVG YQ+ +F P S
Sbjct: 368 GRRPLLLGGVSGITISLFLLGSYYLFLGNVPAVAVVALLLYVGSYQL--SFGPIGWLMIS 425
Query: 426 KIYHFRI 432
+++ R+
Sbjct: 426 EVFPLRL 432
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449526179|ref|XP_004170091.1| PREDICTED: D-xylose-proton symporter-like 2-like, partial [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 317/427 (74%), Positives = 375/427 (87%), Gaps = 10/427 (2%)
Query: 12 LSSFGKVGKSSGEIGSADEEPLIANGIRPSPENYSVSAAILPFLFPALGGLLYGYDIGST 71
LSS GKVG+SSGEI + EEPLI+ + S EN+S AAILPFLFPALGGLLYGYDIG+T
Sbjct: 10 LSSLGKVGQSSGEIDNV-EEPLISVEFKHS-ENFSARAAILPFLFPALGGLLYGYDIGAT 67
Query: 72 SCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAA 131
SCATIS++S + SGISWY+LSSVE+GL+TSGSLYGALIGS+LAFN+AD LGRRRELIL+A
Sbjct: 68 SCATISLQSASSSGISWYNLSSVEVGLVTSGSLYGALIGSVLAFNVADFLGRRRELILSA 127
Query: 132 LLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFF 191
L+YLVGA++T LAP+F+I+++GR + G GIGLAMHAAPMYIAET+P+ +RGQ+ISLKEFF
Sbjct: 128 LMYLVGAIITGLAPNFVILIIGRIISGTGIGLAMHAAPMYIAETSPSKIRGQMISLKEFF 187
Query: 192 IVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGD 251
IVLGMV GY IGSLLV++VAGWRY+Y A+TP+A++MG+GMWWLP+SPRWLLLCA++RKG+
Sbjct: 188 IVLGMVLGYSIGSLLVEVVAGWRYIYAANTPIALVMGVGMWWLPSSPRWLLLCAIQRKGN 247
Query: 252 MQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALII 311
M DL+E AISCL RLRG IG++A EV+EIL ELS++GE +E S+ E+F GKCLKALII
Sbjct: 248 MADLKERAISCLHRLRGAVIGETASEEVNEILEELSFLGESEEASIGEIFQGKCLKALII 307
Query: 312 GAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERL 371
GAGLVLFQQITGQPSVLYYA SI QSAGFSAA+DATRVSILLGL KLIMTG AVLVV+RL
Sbjct: 308 GAGLVLFQQITGQPSVLYYAPSIFQSAGFSAAADATRVSILLGLLKLIMTGAAVLVVDRL 367
Query: 372 GRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNP------S 425
GRRPLLLGGVSGI ISLFLLGSYYLFL +VPAVAVVALLLYVG YQ+ +F P S
Sbjct: 368 GRRPLLLGGVSGITISLFLLGSYYLFLGNVPAVAVVALLLYVGSYQL--SFGPIGWLMIS 425
Query: 426 KIYHFRI 432
+++ R+
Sbjct: 426 EVFPLRL 432
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357474255|ref|XP_003607412.1| D-xylose-proton symporter-like protein [Medicago truncatula] gi|357474261|ref|XP_003607415.1| D-xylose-proton symporter-like protein [Medicago truncatula] gi|355508467|gb|AES89609.1| D-xylose-proton symporter-like protein [Medicago truncatula] gi|355508470|gb|AES89612.1| D-xylose-proton symporter-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 314/424 (74%), Positives = 376/424 (88%), Gaps = 7/424 (1%)
Query: 1 MATDPEQARARLSSFGKVGKSSGEIGSADEEPLIANGIRPSPENYSVSAAILPFLFPALG 60
MA+DPEQ LSSF + GKSS E+ S + EPL+ NGI P++YS+SAAILPFLFPA G
Sbjct: 1 MASDPEQPP--LSSFSQEGKSSTEVRS-EREPLL-NGIH-VPQDYSLSAAILPFLFPAFG 55
Query: 61 GLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADI 120
GLL+GYDIG+TS ATISI+S +LSGI+WYDL +VEIGL+TSGSLYGALIGS+LAFNIAD
Sbjct: 56 GLLFGYDIGATSSATISIQSSSLSGITWYDLDAVEIGLLTSGSLYGALIGSVLAFNIADF 115
Query: 121 LGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPM 180
LGRRREL++AAL+YLVGAL+TA AP+F ++V+GR VFGIGIGLAMHAAPMYIAETAPTP+
Sbjct: 116 LGRRRELLVAALMYLVGALITAFAPNFPLLVIGRLVFGIGIGLAMHAAPMYIAETAPTPI 175
Query: 181 RGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRW 240
RGQL+SLKEFFIV+G+V GYG+GSLLVD VAGWRYM+G S+P+AVIMG GMWWLPASPRW
Sbjct: 176 RGQLVSLKEFFIVIGIVAGYGLGSLLVDTVAGWRYMFGISSPVAVIMGFGMWWLPASPRW 235
Query: 241 LLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREV 300
+LL A+++KGD+Q L+++AI LC+L+G++ DSAP +VDEI+ E SY+GE+ +V+L E+
Sbjct: 236 ILLRAIQKKGDLQTLKDTAIRSLCQLQGRTFHDSAPQQVDEIMAEFSYLGEENDVTLGEM 295
Query: 301 FHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIM 360
F GKC KAL+I AGLVLFQQITGQPSVLYYAASILQSAGFS A+DATRVSILLG+FKLIM
Sbjct: 296 FRGKCRKALVISAGLVLFQQITGQPSVLYYAASILQSAGFSLAADATRVSILLGVFKLIM 355
Query: 361 TGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIK 420
TG+AV+VV+RLGRRPLLLGGVSGIVISLFLLGSYY+FLD+ +AVV LLLYVGCYQ+
Sbjct: 356 TGVAVVVVDRLGRRPLLLGGVSGIVISLFLLGSYYIFLDNAAVLAVVGLLLYVGCYQI-- 413
Query: 421 NFNP 424
+F P
Sbjct: 414 SFGP 417
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388501928|gb|AFK39030.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 626 bits (1615), Expect = e-177, Method: Compositional matrix adjust.
Identities = 313/424 (73%), Positives = 376/424 (88%), Gaps = 7/424 (1%)
Query: 1 MATDPEQARARLSSFGKVGKSSGEIGSADEEPLIANGIRPSPENYSVSAAILPFLFPALG 60
MA+DPEQ LSSF + GKSS E+ S + EPL+ NGI P++YS+SAAILPFLFPA G
Sbjct: 1 MASDPEQPP--LSSFSQEGKSSTEVRS-EREPLL-NGIH-VPQDYSLSAAILPFLFPAFG 55
Query: 61 GLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADI 120
GLL+GYDIG+TS ATISI+S +LSGI+WYDL +VEIGL+TSGSLYGALIGS+LAFNIAD
Sbjct: 56 GLLFGYDIGATSSATISIQSSSLSGITWYDLDAVEIGLLTSGSLYGALIGSVLAFNIADF 115
Query: 121 LGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPM 180
LGRRREL++AAL+YLVGAL+TA AP+F ++++GR VFGIGIGLAMHAAPMYIAETAPTP+
Sbjct: 116 LGRRRELLVAALMYLVGALITAFAPNFPLLLIGRLVFGIGIGLAMHAAPMYIAETAPTPI 175
Query: 181 RGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRW 240
RGQL+SLKEFFIV+G+V GYG+GSLLVD VAGWRYM+G S+P+AVIMG GMWWLPASPRW
Sbjct: 176 RGQLVSLKEFFIVIGIVAGYGLGSLLVDTVAGWRYMFGISSPVAVIMGFGMWWLPASPRW 235
Query: 241 LLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREV 300
+LL A+++KGD+Q L+++AI LC+L+G++ DSAP +VDEI+ E SY+GE+ +V+L E+
Sbjct: 236 ILLRAIQKKGDLQTLKDTAIRSLCQLQGRTFHDSAPQQVDEIMAEFSYLGEENDVTLGEM 295
Query: 301 FHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIM 360
F GKC KAL+I AGLVLFQQITGQPSVLYYAASILQSAGFS A+DATRVSILLG+FKLIM
Sbjct: 296 FRGKCRKALVISAGLVLFQQITGQPSVLYYAASILQSAGFSLAADATRVSILLGVFKLIM 355
Query: 361 TGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIK 420
TG+AV+VV+RLGRRPLLLGGVSGIVISLFLLGSYY+FLD+ +AVV LLLYVGCYQ+
Sbjct: 356 TGVAVVVVDRLGRRPLLLGGVSGIVISLFLLGSYYIFLDNAAVLAVVGLLLYVGCYQI-- 413
Query: 421 NFNP 424
+F P
Sbjct: 414 SFGP 417
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225454803|ref|XP_002277076.1| PREDICTED: D-xylose-proton symporter-like 2 [Vitis vinifera] gi|297737329|emb|CBI26530.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 622 bits (1605), Expect = e-176, Method: Compositional matrix adjust.
Identities = 337/436 (77%), Positives = 380/436 (87%), Gaps = 13/436 (2%)
Query: 3 TDPEQARARLSSFGKVGKSSGEIGSADEEPLIANGIRPSPENYSVSAAILPFLFPALGGL 62
D EQ L+S GKVGKSSGEI +EPLI +G+ S ENYSV+AAILPFLFPALGGL
Sbjct: 2 ADLEQPS--LTSLGKVGKSSGEI-DGMQEPLI-DGVGSS-ENYSVAAAILPFLFPALGGL 56
Query: 63 LYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILG 122
LYGYDIG+TSCA ISIES +LSGISWYDLSSV+IGL TSGSLYGALIGS+LAFNIAD G
Sbjct: 57 LYGYDIGATSCALISIESSSLSGISWYDLSSVQIGLTTSGSLYGALIGSVLAFNIADFFG 116
Query: 123 RRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRG 182
RRRELILAALLYLVGALVTA+AP FI+MV+GRFVFGIGIGL+MHAAPMYIAETAPT +RG
Sbjct: 117 RRRELILAALLYLVGALVTAVAPSFIVMVIGRFVFGIGIGLSMHAAPMYIAETAPTQIRG 176
Query: 183 QLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLL 242
+LISLKEFFIVLGMV GY +GSLLVD+V+GWRYMYG S+PL+VIMG+GMWWLPASPRWLL
Sbjct: 177 RLISLKEFFIVLGMVVGYTVGSLLVDMVSGWRYMYGVSSPLSVIMGIGMWWLPASPRWLL 236
Query: 243 LCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFH 302
L A++ KG+MQDL+E+AI CLCRLRG +IGDSAP +VD IL ELS E KE SL E+FH
Sbjct: 237 LRAIQGKGNMQDLKENAIFCLCRLRGPAIGDSAPAQVDGILDELSSSEETKEASLGEMFH 296
Query: 303 GKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTG 362
GKCLKAL IG GLVLFQQITGQPSVLYYAASIL+SAGFS ASDATRVSIL+GL KLIMT
Sbjct: 297 GKCLKALTIGGGLVLFQQITGQPSVLYYAASILESAGFSGASDATRVSILVGLLKLIMTA 356
Query: 363 LAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNF 422
+AVLVV+++GRRPLLLGGVSGIVISLFLLGSYY++L D PAVAV+ALLLYVGCYQ+ +F
Sbjct: 357 VAVLVVDKVGRRPLLLGGVSGIVISLFLLGSYYIYLGDAPAVAVIALLLYVGCYQL--SF 414
Query: 423 NP------SKIYHFRI 432
P S+I+ R+
Sbjct: 415 GPIGWLMISEIFPLRV 430
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297811841|ref|XP_002873804.1| sugar transporter family protein [Arabidopsis lyrata subsp. lyrata] gi|297319641|gb|EFH50063.1| sugar transporter family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 620 bits (1599), Expect = e-175, Method: Compositional matrix adjust.
Identities = 313/425 (73%), Positives = 368/425 (86%), Gaps = 8/425 (1%)
Query: 1 MATDPEQARARLSSFGK-VGKSSGEIGSADEEPLIANGIRPSPENYSVSAAILPFLFPAL 59
MA DPEQ +SS + VGKS GEI SA+ EPLI +PENYSV AAILPF FPAL
Sbjct: 1 MALDPEQQP--ISSVSREVGKSDGEI-SAEREPLIKE--NHTPENYSVVAAILPFFFPAL 55
Query: 60 GGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIAD 119
GGLLYGY+IG+TSCATIS++SP+LSGISWY+L+SV++GL+TSGSLYGAL GSI+AF IAD
Sbjct: 56 GGLLYGYEIGATSCATISLQSPSLSGISWYNLTSVDVGLVTSGSLYGALFGSIVAFTIAD 115
Query: 120 ILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTP 179
++GRR+ELILAALLYLVGALVTALAP + ++++GR +G+ +GLAMHAAPMYIAETAP+P
Sbjct: 116 VIGRRKELILAALLYLVGALVTALAPTYSVLIIGRVTYGVSVGLAMHAAPMYIAETAPSP 175
Query: 180 MRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPR 239
+RGQL+SLKEFFIVLGMVGGYGIGSL V++ +GWRYMY S PLAVIMG+GMWWLPASPR
Sbjct: 176 IRGQLVSLKEFFIVLGMVGGYGIGSLTVNIHSGWRYMYATSVPLAVIMGIGMWWLPASPR 235
Query: 240 WLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLRE 299
WLLL ++ KG++++ RESAI LCRLRG + DSA +V+EIL EL++VGEDKEV+ E
Sbjct: 236 WLLLRVIQGKGNVENQRESAIKSLCRLRGPAFVDSAAEQVNEILAELTFVGEDKEVTFGE 295
Query: 300 VFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLI 359
+FHGKCLKALIIG GLVLFQQITGQPSVLYYA SILQ+AGFSAA DATRVSILLGL KLI
Sbjct: 296 LFHGKCLKALIIGGGLVLFQQITGQPSVLYYAPSILQTAGFSAAGDATRVSILLGLLKLI 355
Query: 360 MTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVI 419
MTG+AV+V++RLGRRPLLLGGVSG+V+SLFLLGSYYLF P VAVVALLLYVGCYQ+
Sbjct: 356 MTGVAVVVIDRLGRRPLLLGGVSGMVVSLFLLGSYYLFFSASPVVAVVALLLYVGCYQL- 414
Query: 420 KNFNP 424
+F P
Sbjct: 415 -SFGP 418
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 451 | ||||||
| TAIR|locus:2148201 | 503 | AT5G17010 [Arabidopsis thalian | 0.929 | 0.833 | 0.561 | 5.8e-114 | |
| TAIR|locus:2097780 | 503 | VGT1 "vacuolar glucose transpo | 0.924 | 0.829 | 0.528 | 2.8e-105 | |
| TAIR|locus:2168494 | 558 | AT5G59250 [Arabidopsis thalian | 0.920 | 0.743 | 0.432 | 5.6e-84 | |
| UNIPROTKB|F1S3R3 | 621 | SLC2A12 "Uncharacterized prote | 0.567 | 0.412 | 0.311 | 7.7e-26 | |
| UNIPROTKB|F1MIV2 | 621 | SLC2A12 "Solute carrier family | 0.567 | 0.412 | 0.311 | 3.4e-25 | |
| UNIPROTKB|Q8TD20 | 617 | SLC2A12 "Solute carrier family | 0.565 | 0.413 | 0.313 | 9.2e-25 | |
| UNIPROTKB|Q5J316 | 621 | SLC2A12 "Solute carrier family | 0.567 | 0.412 | 0.307 | 9.3e-25 | |
| UNIPROTKB|F1P4J7 | 561 | SLC2A12 "Uncharacterized prote | 0.567 | 0.456 | 0.300 | 3.1e-24 | |
| UNIPROTKB|F1PA43 | 614 | SLC2A12 "Uncharacterized prote | 0.567 | 0.416 | 0.307 | 3.2e-24 | |
| MGI|MGI:3052471 | 622 | Slc2a12 "solute carrier family | 0.705 | 0.511 | 0.287 | 8.9e-24 |
| TAIR|locus:2148201 AT5G17010 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1124 (400.7 bits), Expect = 5.8e-114, P = 5.8e-114
Identities = 238/424 (56%), Positives = 281/424 (66%)
Query: 1 MATDPEQARARLSSFGKVGKSSGEIGSADEEPLIANGIRPSPENYSVSAAIXXXXXXXXX 60
MA DPEQ + S + GKSSGEI S + EPLI PENYSV AAI
Sbjct: 1 MALDPEQQQPISSVSREFGKSSGEI-SPEREPLIKEN--HVPENYSVVAAILPFLFPALG 57
Query: 61 XXXXXXDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADI 120
+IG+TSCATIS++SP+LSGISWY+LSSV++GL+TSGSLYGAL GSI+AF IAD+
Sbjct: 58 GLLYGYEIGATSCATISLQSPSLSGISWYNLSSVDVGLVTSGSLYGALFGSIVAFTIADV 117
Query: 121 LGRRREXXXXXXXXXXXXXXXXXXPDXXXXXXXXXXXXXXXXLAMHAAPMYIAETAPTPM 180
+GRR+E P LAMHAAPMYIAETAP+P+
Sbjct: 118 IGRRKELILAALLYLVGALVTALAPTYSVLIIGRVIYGVSVGLAMHAAPMYIAETAPSPI 177
Query: 181 RGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRW 240
RGQL+SLKEFFIVLGMVGGYGIGSL V++ +GWRYMY S PLAVIMG+GMWWLPASPRW
Sbjct: 178 RGQLVSLKEFFIVLGMVGGYGIGSLTVNVHSGWRYMYATSVPLAVIMGIGMWWLPASPRW 237
Query: 241 LLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREV 300
LLL ++ KG++++ RE+AI LC LRG + DSA +V+EIL EL++VGEDKEV+ E+
Sbjct: 238 LLLRVIQGKGNVENQREAAIKSLCCLRGPAFVDSAAEQVNEILAELTFVGEDKEVTFGEL 297
Query: 301 FHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIM 360
F GKCLKALIIG GLVLFQQITGQPSVLYYA SILQ+AGFSAA DATRVSILLGL KLIM
Sbjct: 298 FQGKCLKALIIGGGLVLFQQITGQPSVLYYAPSILQTAGFSAAGDATRVSILLGLLKLIM 357
Query: 361 TGLAXXXXXXXXXXXXXXXXXXXIVIXXXXXXXXXXXXXXVPXXXXXXXXXYVGCYQVIK 420
TG+A +V+ P YVGCYQ+
Sbjct: 358 TGVAVVVIDRLGRRPLLLGGVGGMVVSLFLLGSYYLFFSASPVVAVVALLLYVGCYQL-- 415
Query: 421 NFNP 424
+F P
Sbjct: 416 SFGP 419
|
|
| TAIR|locus:2097780 VGT1 "vacuolar glucose transporter 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1042 (371.9 bits), Expect = 2.8e-105, P = 2.8e-105
Identities = 225/426 (52%), Positives = 274/426 (64%)
Query: 1 MATDPEQARARLSSFGKV--GKSSGEIGSADEEPLIANGIRPSPENYSVSAAIXXXXXXX 58
M DPE +SS G+V SSG I +A++EPL+ SPENYSV AAI
Sbjct: 1 MGFDPENQS--ISSVGQVVGDSSSGGI-TAEKEPLLKEN--HSPENYSVLAAIPPFLFPA 55
Query: 59 XXXXXXXXDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIA 118
+IG+TSCA +S++SPTLSGISWYDLSSV++G+ITSGSLYGALIGSI+AF++A
Sbjct: 56 LGALLFGYEIGATSCAIMSLKSPTLSGISWYDLSSVDVGIITSGSLYGALIGSIVAFSVA 115
Query: 119 DILGRRREXXXXXXXXXXXXXXXXXXPDXXXXXXXXXXXXXXXXLAMHAAPMYIAETAPT 178
DI+GRR+E P L MHAAPMYIAETAP+
Sbjct: 116 DIIGRRKELILAAFLYLVGAIVTVVAPVFSILIIGRVTYGMGIGLTMHAAPMYIAETAPS 175
Query: 179 PMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASP 238
+RG++ISLKEF VLGMVGGYGIGSL + +++GWRYMY P VIMG GM WLPASP
Sbjct: 176 QIRGRMISLKEFSTVLGMVGGYGIGSLWITVISGWRYMYATILPFPVIMGTGMCWLPASP 235
Query: 239 RWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLR 298
RWLLL A++ +G+ ++L+++AI LCRLRG I DSA +V+EIL ELS VGEDKE +
Sbjct: 236 RWLLLRALQGQGNGENLQQAAIRSLCRLRGSVIADSAAEQVNEILAELSLVGEDKEATFG 295
Query: 299 EVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKL 358
E+F GKCLKAL I GLVLFQQITGQPSVLYYA SILQ+AGFSAA+DATR+SILLGL KL
Sbjct: 296 ELFRGKCLKALTIAGGLVLFQQITGQPSVLYYAPSILQTAGFSAAADATRISILLGLLKL 355
Query: 359 IMTGLAXXXXXXXXXXXXXXXXXXXIVIXXXXXXXXXXXXXXVPXXXXXXXXXYVGCYQV 418
+MTG++ +VI VP YVGCYQ+
Sbjct: 356 VMTGVSVIVIDRVGRRPLLLCGVSGMVISLFLLGSYYMFYKNVPAVAVAALLLYVGCYQL 415
Query: 419 IKNFNP 424
+F P
Sbjct: 416 --SFGP 419
|
|
| TAIR|locus:2168494 AT5G59250 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 841 (301.1 bits), Expect = 5.6e-84, P = 5.6e-84
Identities = 184/425 (43%), Positives = 246/425 (57%)
Query: 5 PEQARARLSSFGKVG-KSSGEIGSADEEPLIANGIRP-SPENYSVSAAIXXXXXXXXXXX 62
P R +VG ++ GE + E +A+ + +PE++S S+ I
Sbjct: 54 PGLVTTRYRHIFQVGAETGGEFADSGE---VADSLASDAPESFSWSSVILPFIFPALGGL 110
Query: 63 XXXXDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILG 122
DIG+TS AT+S++SP LSG +W++ S V++GL+ SGSLYGAL+GSI + +AD LG
Sbjct: 111 LFGYDIGATSGATLSLQSPALSGTTWFNFSPVQLGLVVSGSLYGALLGSISVYGVADFLG 170
Query: 123 RRREXXXXXXXXXXXXXXXXXXPDXXXXXXXXXXXXXXXXLAMHAAPMYIAETAPTPMRG 182
RRRE PD LAMH AP+YIAET P+ +RG
Sbjct: 171 RRRELIIAAVLYLLGSLITGCAPDLNILLVGRLLYGFGIGLAMHGAPLYIAETCPSQIRG 230
Query: 183 QLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLL 242
LISLKE FIVLG++ G+ +GS +D+V GWRYMYG TP+A++MG+GMW LPASPRWLL
Sbjct: 231 TLISLKELFIVLGILLGFSVGSFQIDVVGGWRYMYGFGTPVALLMGLGMWSLPASPRWLL 290
Query: 243 LCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTE-VDEILTELSYVGEDKEV--SLRE 299
L A++ KG +Q+ +E A+ L +LRG+ GD + VD+ + ED++ + E
Sbjct: 291 LRAVQGKGQLQEYKEKAMLALSKLRGRPPGDKISEKLVDDAYLSVKTAYEDEKSGGNFLE 350
Query: 300 VFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLI 359
VF G LKAL IG GLVLFQQITGQPSVLYYA SILQ+AGFSAA+DATRVS+++G+FKL+
Sbjct: 351 VFQGPNLKALTIGGGLVLFQQITGQPSVLYYAGSILQTAGFSAAADATRVSVIIGVFKLL 410
Query: 360 MTGLAXXXXXXXXXXXXXXXXXXXIVIXXXXXXXXXXXXXXVPXXXXXXXXXYVGCYQVI 419
MT +A I + P YVGCYQ+
Sbjct: 411 MTWVAVAKVDDLGRRPLLIGGVSGIALSLFLLSAYYKFLGGFPLVAVGALLLYVGCYQI- 469
Query: 420 KNFNP 424
+F P
Sbjct: 470 -SFGP 473
|
|
| UNIPROTKB|F1S3R3 SLC2A12 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 300 (110.7 bits), Expect = 7.7e-26, P = 7.7e-26
Identities = 85/273 (31%), Positives = 134/273 (49%)
Query: 91 LSSVEIGLITSGSLYGALIGSILAFNIADILGRRREXXXXXXXXXXXXXXXXXXPDXXXX 150
L+ E ++ S L GAL+ S++ + D GRR
Sbjct: 78 LTCHEQEMVVSSLLIGALLASLVGGVVIDRYGRRAAIILSSCLLGVGSLVLIVTLSYAAL 137
Query: 151 XXXXXXXXXXXXLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV 210
L+ A +YIAE AP RG L+SL E IV+G++ Y ++
Sbjct: 138 IVGRIAIGVSISLSSIATCVYIAEIAPQHRRGLLVSLNELMIVIGILFAYVSNYTFANIS 197
Query: 211 AGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQS 270
GW+YM+G PL V+ + M++LP SPR+L++ KG E+A L +LR +
Sbjct: 198 HGWKYMFGLVIPLGVLQAIAMYFLPPSPRFLVM-----KGQ----EEAASKVLGKLR--A 246
Query: 271 IGDSAPTEVDEILTELSYVGEDKEVSLREVFHGK--CLKALIIGAGLVLFQQITGQPSVL 328
+ D PTE E+ S + ++ + S ++F K ++IG LV F QITGQP++L
Sbjct: 247 VSD--PTE--ELTAIKSSLKDEYQYSFWDLFRSKDNMRTRIMIGLTLVFFVQITGQPNIL 302
Query: 329 YYAASILQSAGFSAASDATRVSILLGLFKLIMT 361
+YA+++L+S GF + A+ S +G+ K+I T
Sbjct: 303 FYASTVLKSVGFQSNEAASLASTGVGVVKVIGT 335
|
|
| UNIPROTKB|F1MIV2 SLC2A12 "Solute carrier family 2, facilitated glucose transporter member 12" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 294 (108.6 bits), Expect = 3.4e-25, P = 3.4e-25
Identities = 85/273 (31%), Positives = 134/273 (49%)
Query: 91 LSSVEIGLITSGSLYGALIGSILAFNIADILGRRREXXXXXXXXXXXXXXXXXXPDXXXX 150
L+ E ++ S L GAL+ S++ + D GRR
Sbjct: 78 LTCHEQEMVVSSLLIGALLASLIGGVLIDRYGRRAAIILSSCLLGLGSLVLIISLSYTTL 137
Query: 151 XXXXXXXXXXXXLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV 210
L+ A +YIAE AP RG L+SL E IV+G++ Y ++
Sbjct: 138 IGGRIAIGVFISLSSTATCVYIAEIAPQHRRGLLVSLNELMIVIGILFAYISNYAFANIS 197
Query: 211 AGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQS 270
GW+YM+G PL V+ + M++LP SPR+L++ KG E+A L +LR +
Sbjct: 198 HGWKYMFGLVIPLGVLQAIAMYFLPPSPRFLVM-----KGH----EEAASKVLGKLR--A 246
Query: 271 IGDSAPTEVDEILTELSYVGEDKEVSLREVFHGK--CLKALIIGAGLVLFQQITGQPSVL 328
I D+ TE E+ S + ++ + S ++F K ++IG LV F QITGQP++L
Sbjct: 247 ISDT--TE--ELTVIKSSLKDEYQYSFWDLFRSKDNMRTRIMIGLMLVFFVQITGQPNIL 302
Query: 329 YYAASILQSAGFSAASDATRVSILLGLFKLIMT 361
+YA+++L+S GF + A+ S +G+ K+I T
Sbjct: 303 FYASTVLKSVGFQSNEAASLASTGVGVVKVIST 335
|
|
| UNIPROTKB|Q8TD20 SLC2A12 "Solute carrier family 2, facilitated glucose transporter member 12" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 290 (107.1 bits), Expect = 9.2e-25, P = 9.2e-25
Identities = 86/274 (31%), Positives = 134/274 (48%)
Query: 91 LSSVEIGLITSGSLYGALIGSILAFNIADILGRRREXXXXXXXXXXXXXXXXXXPDXXXX 150
LS E ++ S + GAL+ S+ + D GRR
Sbjct: 74 LSCHEQEMVVSSLVIGALLASLTGGVLIDRYGRRTAIILSSCLLGLGSLVLILSLSYTVL 133
Query: 151 XXXXXXXXXXXXLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV 210
L+ A +YIAE AP RG L+SL E IV+G++ Y ++
Sbjct: 134 IVGRIAIGVSISLSSIATCVYIAEIAPQHRRGLLVSLNELMIVIGILSAYISNYAFANVF 193
Query: 211 AGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAIS-CLCRLRGQ 269
GW+YM+G PL V+ + M++LP SPR+L++ KG +E A S L RLR
Sbjct: 194 HGWKYMFGLVIPLGVLQAIAMYFLPPSPRFLVM-----KG-----QEGAASKVLGRLR-- 241
Query: 270 SIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGK--CLKALIIGAGLVLFQQITGQPSV 327
++ D+ TE E+ S + ++ + S ++F K ++IG LV F QITGQP++
Sbjct: 242 ALSDT--TE--ELTVIKSSLKDEYQYSFWDLFRSKDNMRTRIMIGLTLVFFVQITGQPNI 297
Query: 328 LYYAASILQSAGFSAASDATRVSILLGLFKLIMT 361
L+YA+++L+S GF + A+ S +G+ K+I T
Sbjct: 298 LFYASTVLKSVGFQSNEAASLASTGVGVVKVIST 331
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| UNIPROTKB|Q5J316 SLC2A12 "Solute carrier family 2, facilitated glucose transporter member 12" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 290 (107.1 bits), Expect = 9.3e-25, P = 9.3e-25
Identities = 84/273 (30%), Positives = 134/273 (49%)
Query: 91 LSSVEIGLITSGSLYGALIGSILAFNIADILGRRREXXXXXXXXXXXXXXXXXXPDXXXX 150
L+ E ++ S L GAL+ S++ + D GRR
Sbjct: 78 LTCHEQEMVVSSLLIGALLASLIGGVLIDRYGRRAAIILSSCLLGLGSLVLIISLSYTTL 137
Query: 151 XXXXXXXXXXXXLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV 210
L+ A +YIAE AP RG L+SL E IV+G++ Y ++
Sbjct: 138 IGGRIAIGVFISLSSTATCVYIAEIAPQHRRGLLVSLNELMIVIGILFAYISNYAFANIS 197
Query: 211 AGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQS 270
GW+YM+G PL V+ + M++LP SPR+L++ KG E+A L +LR +
Sbjct: 198 HGWKYMFGLVIPLGVLQAIAMYFLPPSPRFLVM-----KGH----EEAASKVLGKLR--A 246
Query: 271 IGDSAPTEVDEILTELSYVGEDKEVSLREVFHGK--CLKALIIGAGLVLFQQITGQPSVL 328
+ D+ TE E+ S + ++ + S ++F K ++IG LV F QITGQP++L
Sbjct: 247 VLDT--TE--ELTVIKSSLKDEYQYSFWDLFRSKDNMRTRIMIGLTLVFFVQITGQPNIL 302
Query: 329 YYAASILQSAGFSAASDATRVSILLGLFKLIMT 361
+YA+++L+S GF + A+ S +G+ K+I T
Sbjct: 303 FYASTVLKSVGFQSNEAASLASTGVGVVKVIST 335
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| UNIPROTKB|F1P4J7 SLC2A12 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 284 (105.0 bits), Expect = 3.1e-24, P = 3.1e-24
Identities = 82/273 (30%), Positives = 130/273 (47%)
Query: 91 LSSVEIGLITSGSLYGALIGSILAFNIADILGRRREXXXXXXXXXXXXXXXXXXPDXXXX 150
LS E ++ S L+GAL S+ + D GRR
Sbjct: 44 LSCKEQEIVVSSLLFGALFASLTGGFLIDRFGRRFAIIIASSLLVMGSLILLPHESYGIL 103
Query: 151 XXXXXXXXXXXXLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV 210
L+ A +YIAE AP RG L+SL E IV+G++ Y +
Sbjct: 104 IVGRIAIGISISLSSIATCVYIAEIAPQHRRGLLVSLNELMIVIGILFAYISNYAFASVS 163
Query: 211 AGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQS 270
GW+YM+G PL + + M++LP SPR+L++ + D E+A L RLR S
Sbjct: 164 HGWKYMFGLVIPLGALQAIAMYFLPPSPRFLVM----KNND-----EAARKILERLRETS 214
Query: 271 IGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKC-LKA-LIIGAGLVLFQQITGQPSVL 328
A E+ I + L ++ + S ++F K ++A +++G LV F Q TGQP++L
Sbjct: 215 ---DATKELTVIKSSLK---DEHQYSFVDLFRSKNNMRARMLVGLTLVFFVQTTGQPNIL 268
Query: 329 YYAASILQSAGFSAASDATRVSILLGLFKLIMT 361
+YA+++L+S GF + A+ S +G+ K++ T
Sbjct: 269 FYASTVLKSVGFQSNEAASLASTGVGVVKVVST 301
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| UNIPROTKB|F1PA43 SLC2A12 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 285 (105.4 bits), Expect = 3.2e-24, P = 3.2e-24
Identities = 84/273 (30%), Positives = 132/273 (48%)
Query: 91 LSSVEIGLITSGSLYGALIGSILAFNIADILGRRREXXXXXXXXXXXXXXXXXXPDXXXX 150
L+ E ++ S L GAL+ S+ + D GRR
Sbjct: 74 LTCHEQEMVVSSLLIGALLASLTGGVLIDRYGRRAAIILSSCLLGLGSLILILSLSYEVL 133
Query: 151 XXXXXXXXXXXXLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV 210
L+ A +YIAE AP RG L+SL E IV+G++ Y ++
Sbjct: 134 IVGRIAIGVSISLSSIATCVYIAEIAPQHRRGLLVSLNELMIVIGILFAYISNYAFANVS 193
Query: 211 AGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQS 270
GW+YM+G P V+ + M++LP SPR+L++ KG E+A L RLR +
Sbjct: 194 HGWKYMFGLVIPFGVLQAIAMYFLPPSPRFLVM-----KGH----EEAASKVLRRLR--A 242
Query: 271 IGDSAPTEVDEILTELSYVGEDKEVSLREVFHGK--CLKALIIGAGLVLFQQITGQPSVL 328
I D+ TE E+ S + ++ + S ++F K ++IG LV F Q+TGQP++L
Sbjct: 243 ISDT--TE--ELTGIKSSLKDEYQYSFWDLFRSKDNMRTRIMIGLTLVFFVQVTGQPNIL 298
Query: 329 YYAASILQSAGFSAASDATRVSILLGLFKLIMT 361
+YA+++L+S GF + A+ S +G+ K+I T
Sbjct: 299 FYASTVLKSVGFQSNEAASLASTGVGVVKVIST 331
|
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| MGI|MGI:3052471 Slc2a12 "solute carrier family 2 (facilitated glucose transporter), member 12" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 281 (104.0 bits), Expect = 8.9e-24, P = 8.9e-24
Identities = 102/355 (28%), Positives = 160/355 (45%)
Query: 12 LSSFGKVGKSSGEIG-SADEEPLIANGIRPSPENY--SVSAAIXXXXXXXXXXXXXXXDI 68
L+ G+ ++ G G S P A G PS + SV+AAI ++
Sbjct: 13 LNQKGREAETEGSCGASGGGHPACAGG--PSMFTFLTSVTAAISGLLVGY--------EL 62
Query: 69 GSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRREXX 128
G S A + I TL ++ ++ ++ S L GA + S+ + D GRR
Sbjct: 63 GLISGALLQIR--TLLALTCHEQE-----MVVSSLLIGAFLASLTGGVLIDRYGRRLAII 115
Query: 129 XXXXXXXXXXXXXXXXPDXXXXXXXXXXXXXXXXLAMHAAPMYIAETAPTPMRGQLISLK 188
L+ A +YIAE AP RG L+SL
Sbjct: 116 LSSCLLGLGSLVLIMSLSYTLLIMGRVAIGVSISLSSIATCVYIAEIAPQHRRGLLVSLN 175
Query: 189 EFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKR 248
E IV G++ Y ++ GW+YM+G PL V+ + M++LP SPR+L++
Sbjct: 176 ELMIVTGILFAYISNYAFANISNGWKYMFGLVIPLGVLQAIAMYFLPPSPRFLVM----- 230
Query: 249 KGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGK--CL 306
KG ESA L +LR I D+ TE E+ S + ++ + S ++F K
Sbjct: 231 KGQ----EESAGKVLRKLR--VISDT--TE--ELTLIKSSLKDEYQYSFWDLFRSKDNMR 280
Query: 307 KALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMT 361
++IG LV F Q TGQP++L+YA+++L+S GF + A+ S +G+ K++ T
Sbjct: 281 TRILIGLTLVFFVQTTGQPNILFYASTVLKSVGFQSNEAASLASTGVGVVKVVST 335
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q6AWX0 | XYLL2_ARATH | No assigned EC number | 0.7287 | 0.9290 | 0.8330 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | gw1.XIX.1554.1 | SubName- Full=Putative uncharacterized protein; (484 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 451 | |||
| pfam00083 | 449 | pfam00083, Sugar_tr, Sugar (and other) transporter | 2e-55 | |
| TIGR00879 | 481 | TIGR00879, SP, MFS transporter, sugar porter (SP) | 3e-53 | |
| PRK10077 | 479 | PRK10077, xylE, D-xylose transporter XylE; Provisi | 3e-47 | |
| TIGR00895 | 398 | TIGR00895, 2A0115, benzoate transport | 4e-19 | |
| TIGR00898 | 505 | TIGR00898, 2A0119, cation transport protein | 4e-17 | |
| cd06174 | 352 | cd06174, MFS, The Major Facilitator Superfamily (M | 4e-17 | |
| pfam07690 | 346 | pfam07690, MFS_1, Major Facilitator Superfamily | 5e-13 | |
| PRK11551 | 406 | PRK11551, PRK11551, putative 3-hydroxyphenylpropio | 2e-11 | |
| COG2814 | 394 | COG2814, AraJ, Arabinose efflux permease [Carbohyd | 8e-11 | |
| TIGR00880 | 141 | TIGR00880, 2_A_01_02, Multidrug resistance protein | 4e-10 | |
| TIGR00891 | 405 | TIGR00891, 2A0112, putative sialic acid transporte | 9e-09 | |
| cd06174 | 352 | cd06174, MFS, The Major Facilitator Superfamily (M | 2e-07 | |
| TIGR00883 | 394 | TIGR00883, 2A0106, metabolite-proton symporter | 5e-07 | |
| COG0738 | 422 | COG0738, FucP, Fucose permease [Carbohydrate trans | 4e-06 | |
| PRK03893 | 496 | PRK03893, PRK03893, putative sialic acid transport | 5e-06 | |
| TIGR00894 | 465 | TIGR00894, 2A0114euk, Na(+)-dependent inorganic ph | 3e-04 | |
| TIGR00711 | 485 | TIGR00711, efflux_EmrB, drug resistance transporte | 3e-04 | |
| TIGR00900 | 365 | TIGR00900, 2A0121, H+ Antiporter protein | 4e-04 | |
| PRK12307 | 426 | PRK12307, PRK12307, putative sialic acid transport | 5e-04 | |
| pfam05631 | 354 | pfam05631, DUF791, Protein of unknown function (DU | 8e-04 | |
| PRK03545 | 390 | PRK03545, PRK03545, putative arabinose transporter | 0.001 | |
| TIGR01299 | 742 | TIGR01299, synapt_SV2, synaptic vesicle protein SV | 0.003 |
| >gnl|CDD|215702 pfam00083, Sugar_tr, Sugar (and other) transporter | Back alignment and domain information |
|---|
Score = 190 bits (484), Expect = 2e-55
Identities = 129/374 (34%), Positives = 201/374 (53%), Gaps = 27/374 (7%)
Query: 55 LFPALGGLLYGYDIGSTSCATISIES----PTLSGISWYDLSSVEIGLITSGSLYGALIG 110
L ALGG L+GYD G I+ L+ I S+V GLI S G LIG
Sbjct: 3 LVAALGGFLFGYDTGVIGAFLTLIKFFKRFGALTSIGACAASTVLSGLIVSIFSVGCLIG 62
Query: 111 SILAFNIADILGRRRELILAALLYLVGALVTALAPD--FIIMVVGRFVFGIGIGLAMHAA 168
S+ A + D GR++ L++ +L+++GAL+ A F +++VGR + G+G+G
Sbjct: 63 SLFAGKLGDRFGRKKSLLIGNVLFVIGALLQGFAKGKSFYMLIVGRVIVGLGVGGISVLV 122
Query: 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVA--GWRYMYGASTPLAVI 226
PMYI+E AP +RG L SL + I G++ IG L GWR G A++
Sbjct: 123 PMYISEIAPKKLRGALGSLYQLGITFGILVAAIIGLGLNKYSNSDGWRIPLGLQFVPAIL 182
Query: 227 MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTEL 286
+ +G+ +LP SPRWL+L KG +++ R L +LRG S D E+ E L
Sbjct: 183 LLIGLLFLPESPRWLVL-----KGKLEEARAV----LAKLRGVSDVDQ---EIQEEKDSL 230
Query: 287 SYVGEDKEVSLREVFHGKCLK-ALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASD 345
E ++ S E+F GK ++ L++G L +FQQ+TG ++ YY+ +I ++ G SD
Sbjct: 231 ERSVEAEKASWLELFRGKTVRQRLLMGVMLQIFQQLTGINAIFYYSPTIFETLGL---SD 287
Query: 346 ATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPA-- 403
+ V+I++G+ + T +A+ +V+R GRRPLLL G +G+ I +LG L +
Sbjct: 288 SLLVTIIVGVVNFVFTFIAIFLVDRFGRRPLLLLGAAGMAICFLVLGVALLGVAKSKGAG 347
Query: 404 -VAVVALLLYVGCY 416
VA+V +LL++ +
Sbjct: 348 IVAIVFILLFIAFF 361
|
Length = 449 |
| >gnl|CDD|233165 TIGR00879, SP, MFS transporter, sugar porter (SP) family | Back alignment and domain information |
|---|
Score = 185 bits (471), Expect = 3e-53
Identities = 130/406 (32%), Positives = 202/406 (49%), Gaps = 24/406 (5%)
Query: 25 IGSADEEPLIANGIRPSPENYSVSAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLS 84
+ A+ + P+ + L L A+GGL++GYD G A
Sbjct: 1 MSDANLADASELLVTPAGLGSTYWKVALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKF 60
Query: 85 GIS-WYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL 143
+ SS GL+ S L G IG++ A ++D GR++ L++ ALL+++GA++ L
Sbjct: 61 TSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGL 120
Query: 144 AP---DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGY 200
A +++VGR + GIG+G+A PMY++E AP +RG L SL + I G++ Y
Sbjct: 121 AAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAY 180
Query: 201 GIGSLLVDLVA--GWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRES 258
G GS V L GWR G A ++ +G+++LP SPRWL+ + E
Sbjct: 181 GFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLV---------GKGRVEE 231
Query: 259 AISCLCRLRGQSIGDSA-PTEVDEILTELSYVGEDKEVSLREVF--HGKCLKALIIGAGL 315
A L RLRG S D E++ I + S + S +F + + L +G L
Sbjct: 232 ARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVL 291
Query: 316 VLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRP 375
FQQ TG +++YY+ +I ++AG S A VSI++G T +A+ +V+R GRRP
Sbjct: 292 QWFQQFTGINAIMYYSPTIFENAGVS-TDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRP 350
Query: 376 LLLGGVSGIVISLFLLGSYYLFLD-----DVPAVAVVALLLYVGCY 416
LLL G +G+ I LF+LG VA+V +LL++ +
Sbjct: 351 LLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFF 396
|
This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083) [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 481 |
| >gnl|CDD|182225 PRK10077, xylE, D-xylose transporter XylE; Provisional | Back alignment and domain information |
|---|
Score = 169 bits (429), Expect = 3e-47
Identities = 114/381 (29%), Positives = 192/381 (50%), Gaps = 43/381 (11%)
Query: 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISW-YDLSSVEIGLITSGSLYGALIGSIL 113
L LGGLL+GYD S S+ + ++ + ++ +G + +L G +IG L
Sbjct: 15 LVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGAL 74
Query: 114 AFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGR--------FVF-----GIG 160
++ GRR L +AA+L+ + AL +A P+F +G FV GIG
Sbjct: 75 GGYCSNRFGRRDSLKIAAVLFFISALGSA-WPEFGFTSIGPDNTGYVPEFVIYRIIGGIG 133
Query: 161 IGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMV----GGYGI---GSLLVDLVAGW 213
+GLA +PMYIAE AP +RG+L+S +F I+ G + Y I G GW
Sbjct: 134 VGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGW 193
Query: 214 RYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGD 273
RYM+ + A++ M ++++P +PR+L+ + +E A L ++ G +
Sbjct: 194 RYMFASEAIPALLFLMLLYFVPETPRYLM---------SRGKQEQAEGILRKIMGNT--- 241
Query: 274 SAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAAS 333
A + EI L + + + + G + ++IG L +FQQ G VLYYA
Sbjct: 242 LATQALQEIKHSLDHGRKTGG---KLLMFGVGV--IVIGVMLSVFQQFVGINVVLYYAPE 296
Query: 334 ILQSAGFSAASDATRV-SILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLG 392
I ++ G A++D + +I++G+ L T LA++ V++ GR+PL + G G+ I +F LG
Sbjct: 297 IFKTLG--ASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLG 354
Query: 393 SYYLFLDDVPAVAVVALLLYV 413
+ + + VA++++L YV
Sbjct: 355 TAF-YTQAPGIVALLSMLFYV 374
|
Length = 479 |
| >gnl|CDD|233175 TIGR00895, 2A0115, benzoate transport | Back alignment and domain information |
|---|
Score = 88.6 bits (220), Expect = 4e-19
Identities = 85/369 (23%), Positives = 143/369 (38%), Gaps = 47/369 (12%)
Query: 34 IANGIRPSPENYSVSAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSS 93
+ N IR P + + L L+ GYD+ A + +P +S W L
Sbjct: 2 VQNNIRKQPLS---RYQWRAIILSFLIMLMDGYDL-----AAMGFAAPAISA-EW-GLDP 51
Query: 94 VEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVG 153
V++G + S L G G++ +AD +GRRR L+ + LL+ V L+ ALA + +++
Sbjct: 52 VQLGFLFSAGLIGMAFGALFFGPLADRIGRRRVLLWSILLFSVFTLLCALATNVTQLLIL 111
Query: 154 RFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGW 213
RF+ G+G+G M ++E AP RG + L +G G + L+ V GW
Sbjct: 112 RFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIP-VFGW 170
Query: 214 RYMYGASTPLAVIMGMGMW-WLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIG 272
R ++ +++ + + +LP S +L+ K R +I
Sbjct: 171 RSLFYVGGIAPLLLLLLLMRFLPESIDFLV-----SKRPETVRR----------IVNAIA 215
Query: 273 DSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAA 332
E L E K + +F GK + ++ L + +Y+
Sbjct: 216 PQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVG-----VYFLT 270
Query: 333 SILQSAGFSAASDATRVSILLGLF-------KLIMTGLAVLVVERLGRRP----LLLGGV 381
+ L + + LF +I LA RLG R LLLG V
Sbjct: 271 NWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLAD----RLGPRVTALLLLLGAV 326
Query: 382 SGIVISLFL 390
+++ L
Sbjct: 327 FAVLVGSTL 335
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[Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 398 |
| >gnl|CDD|233176 TIGR00898, 2A0119, cation transport protein | Back alignment and domain information |
|---|
Score = 83.1 bits (206), Expect = 4e-17
Identities = 75/321 (23%), Positives = 141/321 (43%), Gaps = 52/321 (16%)
Query: 92 SSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMV 151
+ ++ L S G L+GS + ++D GR++ L+L+ L+ V ++TA +P++ + +
Sbjct: 125 DAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFL 184
Query: 152 VGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVA 211
V R + G+GIG A + E P R + +L + F LG+V + L+ +
Sbjct: 185 VFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLV----LLPLVAYFIP 240
Query: 212 GWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSI 271
WR++ A + + + W++P SPRWL+ Q E A+ L R+
Sbjct: 241 DWRWLQLAVSLPTFLFFLLSWFVPESPRWLIS---------QGRIEEALKILQRI----- 286
Query: 272 GDSAPTEVDEILTELSYVGEDKEVSLREVFHG-----------KCLKALIIGAGLVLFQQ 320
A ++ E+ + +K++S + + K L++
Sbjct: 287 ---AKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTT---- 339
Query: 321 ITGQPSVLYYAASI-LQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRP---- 375
+ YY + L + G + D + GL +L + +L+++RLGRR
Sbjct: 340 -----AFSYYGLVLDLGNLGGNIYLDL----FISGLVELPAKLITLLLIDRLGRRYTMAA 390
Query: 376 -LLLGGVSGIVISLFLLGSYY 395
LLL GV+ +++ LF+ Y
Sbjct: 391 SLLLAGVA-LLLLLFVPVDLY 410
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[Transport and binding proteins, Cations and iron carrying compounds]. Length = 505 |
| >gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters | Back alignment and domain information |
|---|
Score = 82.0 bits (203), Expect = 4e-17
Identities = 62/193 (32%), Positives = 93/193 (48%), Gaps = 8/193 (4%)
Query: 54 FLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSIL 113
L LG L G D G S A + LS+ + GLI S G +GS+L
Sbjct: 1 LLLLFLGFFLSGLDRGLLSPALPLL-------AEDLGLSASQAGLIVSAFSLGYALGSLL 53
Query: 114 AFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIA 173
A ++D GRRR L+L LL+ +G+L+ A A +++VGRF+ G+G G AA IA
Sbjct: 54 AGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIA 113
Query: 174 ETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW 233
E P RG+ + L LG + G +G LL + GWR+++ L +++ + + +
Sbjct: 114 EWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAES-LGWRWLFLILAILGLLLALLLLF 172
Query: 234 LPASPRWLLLCAM 246
L L L
Sbjct: 173 LLRLLLLLALAFF 185
|
MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated. Length = 352 |
| >gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily | Back alignment and domain information |
|---|
Score = 69.8 bits (171), Expect = 5e-13
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 2/152 (1%)
Query: 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFI 148
+S EIGL+ + G + LA ++D GRRR L++ LL+ +G L+ A
Sbjct: 27 LGISPTEIGLLLTAFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLLFASSLW 86
Query: 149 IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD 208
+++V R + G+G G AA IA+ P RG+ + L LG G +G LL
Sbjct: 87 LLLVLRVLQGLGGGALFPAAAALIADWFPPEERGRALGLLSAGFGLGAALGPLLGGLLAS 146
Query: 209 LVAGWRYMYGASTPLAVIMG-MGMWWLPASPR 239
L GWR + LA++ + LP P
Sbjct: 147 LF-GWRAAFLILAILALLAAVLAALLLPRPPP 177
|
Length = 346 |
| >gnl|CDD|236927 PRK11551, PRK11551, putative 3-hydroxyphenylpropionic transporter MhpT; Provisional | Back alignment and domain information |
|---|
Score = 64.6 bits (158), Expect = 2e-11
Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 24/163 (14%)
Query: 91 LSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIM 150
L ++G S + G L G++L +AD +GR+R LI++ L+ + +L TA A DF +
Sbjct: 47 LDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSL 106
Query: 151 VVGRFVFGIGIGLAMHAAPMYIA---ETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLV 207
+V R + G+G+G A+ P IA E +RG +SL M G G L
Sbjct: 107 LVARLLTGVGLGGAL---PNLIALTSEAVGPRLRGTAVSL--------MYCGVPFGGALA 155
Query: 208 DLVA-------GWRYMY--GASTPLAVIMGMGMWWLPASPRWL 241
++ WR+++ G PL ++ + M WLP S +
Sbjct: 156 SVIGVLAAGDAAWRHIFYVGGVGPLLLVPLL-MRWLPESRAFA 197
|
Length = 406 |
| >gnl|CDD|225371 COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 63.4 bits (155), Expect = 8e-11
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 96 IGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRF 155
G + + G +G+ L + L RRR L+ L++V L++ALAP F ++++ R
Sbjct: 50 AGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARA 109
Query: 156 VFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRY 215
+ G+ G+ A A P RG+ ++L + L V G +G+ L L GWR
Sbjct: 110 LAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLF-GWRA 168
Query: 216 MYGASTPLAVIMGMGMWWL 234
+ A LA++ + +W L
Sbjct: 169 TFLAIAVLALLALLLLWKL 187
|
Length = 394 |
| >gnl|CDD|233166 TIGR00880, 2_A_01_02, Multidrug resistance protein | Back alignment and domain information |
|---|
Score = 57.7 bits (140), Expect = 4e-10
Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
Query: 97 GLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFV 156
GL+ +G G LI S L+ + D GR+ L++ ++++ + AL+ + ++++ RF+
Sbjct: 1 GLLLAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFL 60
Query: 157 FGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYM 216
G G A+ A IA+ P RG + L I LG + G +G +L + GWR
Sbjct: 61 QGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFL-GWRAP 119
Query: 217 Y 217
+
Sbjct: 120 F 120
|
Length = 141 |
| >gnl|CDD|233172 TIGR00891, 2A0112, putative sialic acid transporter | Back alignment and domain information |
|---|
Score = 56.8 bits (137), Expect = 9e-09
Identities = 36/154 (23%), Positives = 69/154 (44%), Gaps = 20/154 (12%)
Query: 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFI 148
+ L++V+ + S +L G+++ D GRR ++ + +L+ G L AP +I
Sbjct: 42 FGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGYI 101
Query: 149 IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD 208
M + R V GIG+G ++ Y+ E+ P +R + L ++ GY +G+++
Sbjct: 102 TMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGL--------LISGYAVGAVVAA 153
Query: 209 LVA---------GWRYMYGASTPLAVIMGMGMWW 233
V GWR ++ S + +W
Sbjct: 154 QVYSLVVPVWGDGWRALFFISILPIIFA---LWL 184
|
[Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 405 |
| >gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 2e-07
Identities = 56/190 (29%), Positives = 88/190 (46%), Gaps = 3/190 (1%)
Query: 47 VSAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYG 106
+ A +L FL L L + + S + P LS+ E GL+ S G
Sbjct: 165 LLALLLLFLLRLLLLLALAFFLLSFGYYGLLTYLPLY-LQEVLGLSAAEAGLLLSLFGLG 223
Query: 107 ALIGSILAFNIADILGRRRE-LILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAM 165
++G++L ++D LGRRR L++ LL +G L+ ALAP +++V + G G+G A
Sbjct: 224 GILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAF 283
Query: 166 HAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAV 225
A +E AP RG L F LG G + LL+D G+ ++ LA+
Sbjct: 284 PALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTG-GYGGVFLILAALAL 342
Query: 226 IMGMGMWWLP 235
+ + + LP
Sbjct: 343 LAALLLLLLP 352
|
MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated. Length = 352 |
| >gnl|CDD|233168 TIGR00883, 2A0106, metabolite-proton symporter | Back alignment and domain information |
|---|
Score = 51.1 bits (123), Expect = 5e-07
Identities = 70/326 (21%), Positives = 123/326 (37%), Gaps = 70/326 (21%)
Query: 109 IGSILAFNIADILGRRRELILAALLYLVGALVTALAPDF--------IIMVVGRFVFGIG 160
+G+I+ + D +GR++ L++ L+ +G L+ L P + I++++ R + G
Sbjct: 50 LGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFS 109
Query: 161 IGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVA--------- 211
+G A +Y+AE AP RG S F +G G + +L V L++
Sbjct: 110 LGGEWGGAALYLAEYAPPGKRGFYGS----FQQVGAPVGLLLAALTVLLLSYLLGDDALL 165
Query: 212 --GWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQ 269
GWR + S L +I G++ LR +
Sbjct: 166 EWGWRIPFLVSAVLVLI---GLY----------------------LRRNL---------- 190
Query: 270 SIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLY 329
E + K + E K K ++G GLV+ T Y
Sbjct: 191 -------EETPVFEKAQEK-HKKKRGPIAETLT-KHRKPFLLGLGLVIATTTTFYLITTY 241
Query: 330 YAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLF 389
+ Q+ G S A+ A V +L + I L+ + +R+GRRP+L+ ++ +L
Sbjct: 242 LPTYLTQTLGLS-ANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIF--TVLAALL 298
Query: 390 LLGSYYLFLDDVPAVAVVALLLYVGC 415
+ LD L+L +
Sbjct: 299 AVPLLMALLDSGSFTLFFFLVLGMAL 324
|
This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc [Transport and binding proteins, Unknown substrate]. Length = 394 |
| >gnl|CDD|223809 COG0738, FucP, Fucose permease [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 48.9 bits (117), Expect = 4e-06
Identities = 37/139 (26%), Positives = 56/139 (40%), Gaps = 3/139 (2%)
Query: 73 CATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAAL 132
T + +DL+ E LI G I S+ A + LG + ++L L
Sbjct: 27 FITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLL 86
Query: 133 LYLVGALVTALAP---DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKE 189
LY VGA + A + +V F+ GIGL AA Y+ ++L +
Sbjct: 87 LYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQ 146
Query: 190 FFIVLGMVGGYGIGSLLVD 208
F LG + G +GS L+
Sbjct: 147 AFNGLGAILGPLLGSSLIL 165
|
Length = 422 |
| >gnl|CDD|179668 PRK03893, PRK03893, putative sialic acid transporter; Provisional | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 5e-06
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 23/140 (16%)
Query: 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFI 148
+ L++V+ + S + G +L + D GRR ++++ +L+ VG L AP +
Sbjct: 50 FGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYW 109
Query: 149 IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMR----GQLISLKEFFIVLGMVGGYGIGS 204
+ + R V G+G+ ++ Y+ E+ P +R G LIS G+ IG+
Sbjct: 110 TLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLIS------------GFSIGA 157
Query: 205 LLVDLVA-------GWRYMY 217
++ V GWR ++
Sbjct: 158 VVAAQVYSLVVPVWGWRALF 177
|
Length = 496 |
| >gnl|CDD|129972 TIGR00894, 2A0114euk, Na(+)-dependent inorganic phosphate cotransporter | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 3e-04
Identities = 39/204 (19%), Positives = 67/204 (32%), Gaps = 13/204 (6%)
Query: 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVT--ALAPD 146
+ S GLI S YG +I I +A + + + L V ++V A
Sbjct: 71 FKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGG 130
Query: 147 FIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLL 206
++V R + G+ G A I + AP R +L+ + G+ +G+ +
Sbjct: 131 IALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGM--------STSGFQLGTFI 182
Query: 207 VDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMK-RKGDMQDLRESAISCLCR 265
++GW P+ + G+ S W + A E
Sbjct: 183 FLPISGWLCESWGGWPMIFYVF-GIVGCAWSLLWFVFPADDPSIHPCISKFEKK-YINSS 240
Query: 266 LRGQSIGDSAPTEVDEILTELSYV 289
L+GQ + I L
Sbjct: 241 LQGQKGSTRQSLPIKAIPKSLPVW 264
|
[Transport and binding proteins, Anions]. Length = 465 |
| >gnl|CDD|129794 TIGR00711, efflux_EmrB, drug resistance transporter, EmrB/QacA subfamily | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 3e-04
Identities = 30/145 (20%), Positives = 70/145 (48%), Gaps = 11/145 (7%)
Query: 82 TLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVT 141
+LS + W +ITS L A+ + + +A G RR +++ + +G+L+
Sbjct: 35 SLSQVQW---------VITSYMLANAISIPLTGW-LAKRFGTRRLFLISTFAFTLGSLLC 84
Query: 142 ALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYG 201
+AP+ +M++ R + G G G + + + P RG+ +++ +++ G
Sbjct: 85 GVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPT 144
Query: 202 IGSLLVDLVAGWRYMYGASTPLAVI 226
+G +++ WR+++ + P+ +I
Sbjct: 145 LGGWIIENY-HWRWIFLINVPIGII 168
|
This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other]. Length = 485 |
| >gnl|CDD|162098 TIGR00900, 2A0121, H+ Antiporter protein | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 4e-04
Identities = 24/120 (20%), Positives = 42/120 (35%), Gaps = 1/120 (0%)
Query: 90 DLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPD-FI 148
S G + + GAL+G++L + R + A + + LV L P F
Sbjct: 243 GRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFP 302
Query: 149 IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD 208
+ +V F G+G G + P + G++ + G + L D
Sbjct: 303 LFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLAD 362
|
[Transport and binding proteins, Cations and iron carrying compounds]. Length = 365 |
| >gnl|CDD|237051 PRK12307, PRK12307, putative sialic acid transporter; Provisional | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 5e-04
Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 15/131 (11%)
Query: 91 LSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIM 150
L+ +E + + + G G L +AD GR+ ++ + + Y VG ++ LA I++
Sbjct: 50 LTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIML 109
Query: 151 VVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL- 209
+ RF+ G+G+ A Y E+ P ++ + + +V G+GIG+++
Sbjct: 110 TLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAF--------LVSGFGIGNIIAAYF 161
Query: 210 ------VAGWR 214
GWR
Sbjct: 162 MPSFAEAYGWR 172
|
Length = 426 |
| >gnl|CDD|114359 pfam05631, DUF791, Protein of unknown function (DUF791) | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 8e-04
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 85 GISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA 144
G S D+ + I S L+G ++GS+ AD GR+R + +LY + + +T +
Sbjct: 65 GFSKGDIGILFIAGFGSSMLFGTIVGSL-----ADKQGRKRACLTYCILY-ILSCITKHS 118
Query: 145 PDFIIMVVGRFVFGIGIGLAMHA 167
P++ ++++GRF+ GI L A
Sbjct: 119 PNYKVLMIGRFLGGIATSLLFSA 141
|
This family consists of several eukaryotic proteins of unknown function. Length = 354 |
| >gnl|CDD|179591 PRK03545, PRK03545, putative arabinose transporter; Provisional | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 0.001
Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 13/118 (11%)
Query: 123 RRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHA------APMYIAETA 176
RR+ LI +L++ +++ALA +F ++++ R IGI A HA A + I A
Sbjct: 73 RRKLLIGLFVLFIASHVLSALAWNFTVLLISR----IGIAFA-HAIFWSITASLAI-RVA 126
Query: 177 PTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWL 234
P + Q +SL L MV G +G ++ + GWR + A A+I + + L
Sbjct: 127 PAGKKAQALSLLATGTALAMVLGLPLGRVIGQYL-GWRTTFLAIGGGALITLLLLIKL 183
|
Length = 390 |
| >gnl|CDD|130366 TIGR01299, synapt_SV2, synaptic vesicle protein SV2 | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.003
Identities = 34/167 (20%), Positives = 68/167 (40%), Gaps = 18/167 (10%)
Query: 91 LSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIM 150
+ G++ G ++G+ +AD LGR++ L++ + A ++ +
Sbjct: 199 IPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFF 258
Query: 151 VVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV 210
+ R + G GIG A+ Y AE RG+ +S + + M+GG ++ ++
Sbjct: 259 LFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLS---WLCMFWMIGGIYAAAMAWAII 315
Query: 211 A--GWRYMYGASTPL-------------AVIMGMGMWWLPASPRWLL 242
GW + G++ V + ++P SPR+ L
Sbjct: 316 PHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFL 362
|
This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by PFAM model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices. Length = 742 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 451 | |||
| KOG0569 | 485 | consensus Permease of the major facilitator superf | 100.0 | |
| TIGR01299 | 742 | synapt_SV2 synaptic vesicle protein SV2. This mode | 100.0 | |
| KOG0254 | 513 | consensus Predicted transporter (major facilitator | 100.0 | |
| PRK10077 | 479 | xylE D-xylose transporter XylE; Provisional | 100.0 | |
| TIGR00887 | 502 | 2A0109 phosphate:H+ symporter. This model represen | 100.0 | |
| TIGR00879 | 481 | SP MFS transporter, sugar porter (SP) family. This | 100.0 | |
| TIGR02332 | 412 | HpaX 4-hydroxyphenylacetate permease. This protein | 100.0 | |
| COG2814 | 394 | AraJ Arabinose efflux permease [Carbohydrate trans | 100.0 | |
| PRK14995 | 495 | methyl viologen resistance protein SmvA; Provision | 100.0 | |
| PRK10642 | 490 | proline/glycine betaine transporter; Provisional | 100.0 | |
| PRK10406 | 432 | alpha-ketoglutarate transporter; Provisional | 100.0 | |
| PRK11551 | 406 | putative 3-hydroxyphenylpropionic transporter MhpT | 100.0 | |
| COG2271 | 448 | UhpC Sugar phosphate permease [Carbohydrate transp | 100.0 | |
| TIGR00898 | 505 | 2A0119 cation transport protein. | 100.0 | |
| PRK12307 | 426 | putative sialic acid transporter; Provisional | 100.0 | |
| PRK03545 | 390 | putative arabinose transporter; Provisional | 100.0 | |
| TIGR00891 | 405 | 2A0112 putative sialic acid transporter. | 100.0 | |
| PRK09556 | 467 | uhpT sugar phosphate antiporter; Reviewed | 100.0 | |
| PRK11663 | 434 | regulatory protein UhpC; Provisional | 100.0 | |
| PRK09952 | 438 | shikimate transporter; Provisional | 100.0 | |
| TIGR00711 | 485 | efflux_EmrB drug resistance transporter, EmrB/QacA | 100.0 | |
| PRK15075 | 434 | citrate-proton symporter; Provisional | 100.0 | |
| TIGR00895 | 398 | 2A0115 benzoate transport. | 100.0 | |
| TIGR00903 | 368 | 2A0129 major facilitator 4 family protein. This fa | 100.0 | |
| PRK09705 | 393 | cynX putative cyanate transporter; Provisional | 100.0 | |
| PF00083 | 451 | Sugar_tr: Sugar (and other) transporter; InterPro: | 100.0 | |
| KOG1330 | 493 | consensus Sugar transporter/spinster transmembrane | 100.0 | |
| KOG0253 | 528 | consensus Synaptic vesicle transporter SV2 (major | 100.0 | |
| TIGR00890 | 377 | 2A0111 Oxalate/Formate Antiporter. | 100.0 | |
| PRK10213 | 394 | nepI ribonucleoside transporter; Reviewed | 99.98 | |
| PF07690 | 352 | MFS_1: Major Facilitator Superfamily; InterPro: IP | 99.98 | |
| TIGR00710 | 385 | efflux_Bcr_CflA drug resistance transporter, Bcr/C | 99.98 | |
| PRK03893 | 496 | putative sialic acid transporter; Provisional | 99.98 | |
| PRK10091 | 382 | MFS transport protein AraJ; Provisional | 99.98 | |
| TIGR00893 | 399 | 2A0114 d-galactonate transporter. | 99.97 | |
| PRK15402 | 406 | multidrug efflux system translocase MdfA; Provisio | 99.97 | |
| TIGR00894 | 465 | 2A0114euk Na(+)-dependent inorganic phosphate cotr | 99.97 | |
| PRK10504 | 471 | putative transporter; Provisional | 99.97 | |
| TIGR00900 | 365 | 2A0121 H+ Antiporter protein. | 99.97 | |
| TIGR00881 | 379 | 2A0104 phosphoglycerate transporter family protein | 99.97 | |
| PLN00028 | 476 | nitrate transmembrane transporter; Provisional | 99.97 | |
| PRK11273 | 452 | glpT sn-glycerol-3-phosphate transporter; Provisio | 99.97 | |
| KOG0255 | 521 | consensus Synaptic vesicle transporter SVOP and re | 99.97 | |
| PRK15034 | 462 | nitrate/nitrite transport protein NarU; Provisiona | 99.97 | |
| PRK12382 | 392 | putative transporter; Provisional | 99.97 | |
| PRK15403 | 413 | multidrug efflux system protein MdtM; Provisional | 99.97 | |
| TIGR00886 | 366 | 2A0108 nitrite extrusion protein (nitrite facilita | 99.97 | |
| PRK05122 | 399 | major facilitator superfamily transporter; Provisi | 99.97 | |
| PRK03699 | 394 | putative transporter; Provisional | 99.97 | |
| PRK11043 | 401 | putative transporter; Provisional | 99.97 | |
| TIGR00712 | 438 | glpT glycerol-3-phosphate transporter. This model | 99.97 | |
| PRK10133 | 438 | L-fucose transporter; Provisional | 99.97 | |
| PRK03633 | 381 | putative MFS family transporter protein; Provision | 99.97 | |
| PRK11102 | 377 | bicyclomycin/multidrug efflux system; Provisional | 99.96 | |
| TIGR00883 | 394 | 2A0106 metabolite-proton symporter. This model rep | 99.96 | |
| KOG0252 | 538 | consensus Inorganic phosphate transporter [Inorgan | 99.96 | |
| KOG2533 | 495 | consensus Permease of the major facilitator superf | 99.96 | |
| TIGR00885 | 410 | fucP L-fucose:H+ symporter permease. This family d | 99.96 | |
| PRK11652 | 394 | emrD multidrug resistance protein D; Provisional | 99.96 | |
| TIGR00892 | 455 | 2A0113 monocarboxylate transporter 1. | 99.96 | |
| TIGR00899 | 375 | 2A0120 sugar efflux transporter. This family of pr | 99.96 | |
| cd06174 | 352 | MFS The Major Facilitator Superfamily (MFS) is a l | 99.96 | |
| PRK11195 | 393 | lysophospholipid transporter LplT; Provisional | 99.96 | |
| KOG2532 | 466 | consensus Permease of the major facilitator superf | 99.96 | |
| PRK09874 | 408 | drug efflux system protein MdtG; Provisional | 99.96 | |
| TIGR00897 | 402 | 2A0118 polyol permease family. This family of prot | 99.96 | |
| TIGR00896 | 355 | CynX cyanate transporter. This family of proteins | 99.96 | |
| PRK10489 | 417 | enterobactin exporter EntS; Provisional | 99.96 | |
| PRK10473 | 392 | multidrug efflux system protein MdtL; Provisional | 99.96 | |
| COG2223 | 417 | NarK Nitrate/nitrite transporter [Inorganic ion tr | 99.95 | |
| TIGR00901 | 356 | 2A0125 AmpG-related permease. | 99.95 | |
| PF06609 | 599 | TRI12: Fungal trichothecene efflux pump (TRI12); I | 99.95 | |
| PRK11646 | 400 | multidrug resistance protein MdtH; Provisional | 99.95 | |
| PRK10054 | 395 | putative transporter; Provisional | 99.95 | |
| TIGR00902 | 382 | 2A0127 phenyl proprionate permease family protein. | 99.95 | |
| PRK15011 | 393 | sugar efflux transporter B; Provisional | 99.94 | |
| PRK11010 | 491 | ampG muropeptide transporter; Validated | 99.94 | |
| PRK11128 | 382 | putative 3-phenylpropionic acid transporter; Provi | 99.94 | |
| TIGR00805 | 633 | oat sodium-independent organic anion transporter. | 99.94 | |
| PRK08633 | 1146 | 2-acyl-glycerophospho-ethanolamine acyltransferase | 99.94 | |
| COG0738 | 422 | FucP Fucose permease [Carbohydrate transport and m | 99.93 | |
| KOG2504 | 509 | consensus Monocarboxylate transporter [Carbohydrat | 99.93 | |
| PRK11902 | 402 | ampG muropeptide transporter; Reviewed | 99.93 | |
| PRK06814 | 1140 | acylglycerophosphoethanolamine acyltransferase; Pr | 99.93 | |
| TIGR00806 | 511 | rfc RFC reduced folate carrier. Proteins of the RF | 99.93 | |
| KOG2615 | 451 | consensus Permease of the major facilitator superf | 99.93 | |
| PRK10207 | 489 | dipeptide/tripeptide permease B; Provisional | 99.92 | |
| PRK09528 | 420 | lacY galactoside permease; Reviewed | 99.92 | |
| TIGR00882 | 396 | 2A0105 oligosaccharide:H+ symporter. | 99.91 | |
| COG2807 | 395 | CynX Cyanate permease [Inorganic ion transport and | 99.91 | |
| TIGR00889 | 418 | 2A0110 nucleoside transporter. This family of prot | 99.91 | |
| KOG3764 | 464 | consensus Vesicular amine transporter [Intracellul | 99.91 | |
| PTZ00207 | 591 | hypothetical protein; Provisional | 99.89 | |
| TIGR00924 | 475 | yjdL_sub1_fam amino acid/peptide transporter (Pept | 99.89 | |
| TIGR00792 | 437 | gph sugar (Glycoside-Pentoside-Hexuronide) transpo | 99.88 | |
| PF05977 | 524 | MFS_3: Transmembrane secretion effector; InterPro: | 99.88 | |
| TIGR02718 | 390 | sider_RhtX_FptX siderophore transporter, RhtX/FptX | 99.88 | |
| PRK09584 | 500 | tppB putative tripeptide transporter permease; Rev | 99.87 | |
| TIGR01301 | 477 | GPH_sucrose GPH family sucrose/H+ symporter. This | 99.82 | |
| PRK15462 | 493 | dipeptide/tripeptide permease D; Provisional | 99.81 | |
| KOG4686 | 459 | consensus Predicted sugar transporter [Carbohydrat | 99.8 | |
| PF03825 | 400 | Nuc_H_symport: Nucleoside H+ symporter | 99.8 | |
| KOG2563 | 480 | consensus Permease of the major facilitator superf | 99.8 | |
| TIGR00788 | 468 | fbt folate/biopterin transporter. The only functio | 99.79 | |
| PF13347 | 428 | MFS_2: MFS/sugar transport protein | 99.78 | |
| PRK10429 | 473 | melibiose:sodium symporter; Provisional | 99.78 | |
| PRK09669 | 444 | putative symporter YagG; Provisional | 99.76 | |
| PRK10642 | 490 | proline/glycine betaine transporter; Provisional | 99.71 | |
| TIGR01272 | 310 | gluP glucose/galactose transporter. Disruption of | 99.71 | |
| PRK11462 | 460 | putative transporter; Provisional | 99.69 | |
| KOG2325 | 488 | consensus Predicted transporter/transmembrane prot | 99.68 | |
| PRK09848 | 448 | glucuronide transporter; Provisional | 99.68 | |
| TIGR00880 | 141 | 2_A_01_02 Multidrug resistance protein. | 99.68 | |
| COG2211 | 467 | MelB Na+/melibiose symporter and related transport | 99.65 | |
| PF11700 | 477 | ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 | 99.65 | |
| PF01306 | 412 | LacY_symp: LacY proton/sugar symporter; InterPro: | 99.64 | |
| COG3104 | 498 | PTR2 Dipeptide/tripeptide permease [Amino acid tra | 99.64 | |
| PF03137 | 539 | OATP: Organic Anion Transporter Polypeptide (OATP) | 99.62 | |
| KOG3626 | 735 | consensus Organic anion transporter [Secondary met | 99.61 | |
| PRK09528 | 420 | lacY galactoside permease; Reviewed | 99.6 | |
| PRK15011 | 393 | sugar efflux transporter B; Provisional | 99.59 | |
| TIGR01299 | 742 | synapt_SV2 synaptic vesicle protein SV2. This mode | 99.57 | |
| TIGR00889 | 418 | 2A0110 nucleoside transporter. This family of prot | 99.56 | |
| TIGR00890 | 377 | 2A0111 Oxalate/Formate Antiporter. | 99.55 | |
| PRK05122 | 399 | major facilitator superfamily transporter; Provisi | 99.54 | |
| cd06174 | 352 | MFS The Major Facilitator Superfamily (MFS) is a l | 99.53 | |
| TIGR00899 | 375 | 2A0120 sugar efflux transporter. This family of pr | 99.53 | |
| KOG2816 | 463 | consensus Predicted transporter ADD1 (major facili | 99.53 | |
| PRK11551 | 406 | putative 3-hydroxyphenylpropionic transporter MhpT | 99.53 | |
| PRK12382 | 392 | putative transporter; Provisional | 99.51 | |
| TIGR00902 | 382 | 2A0127 phenyl proprionate permease family protein. | 99.5 | |
| PF03209 | 403 | PUCC: PUCC protein; InterPro: IPR004896 This prote | 99.5 | |
| TIGR00892 | 455 | 2A0113 monocarboxylate transporter 1. | 99.5 | |
| COG2270 | 438 | Permeases of the major facilitator superfamily [Ge | 99.49 | |
| PRK09874 | 408 | drug efflux system protein MdtG; Provisional | 99.49 | |
| PF05631 | 354 | DUF791: Protein of unknown function (DUF791); Inte | 99.46 | |
| PRK03633 | 381 | putative MFS family transporter protein; Provision | 99.44 | |
| TIGR00891 | 405 | 2A0112 putative sialic acid transporter. | 99.43 | |
| PRK03699 | 394 | putative transporter; Provisional | 99.43 | |
| TIGR00893 | 399 | 2A0114 d-galactonate transporter. | 99.42 | |
| PRK10489 | 417 | enterobactin exporter EntS; Provisional | 99.42 | |
| PRK09556 | 467 | uhpT sugar phosphate antiporter; Reviewed | 99.42 | |
| TIGR00883 | 394 | 2A0106 metabolite-proton symporter. This model rep | 99.42 | |
| PRK03545 | 390 | putative arabinose transporter; Provisional | 99.41 | |
| PF01770 | 412 | Folate_carrier: Reduced folate carrier; InterPro: | 99.41 | |
| PRK03893 | 496 | putative sialic acid transporter; Provisional | 99.41 | |
| TIGR00879 | 481 | SP MFS transporter, sugar porter (SP) family. This | 99.39 | |
| PRK09705 | 393 | cynX putative cyanate transporter; Provisional | 99.38 | |
| PRK11128 | 382 | putative 3-phenylpropionic acid transporter; Provi | 99.38 | |
| PRK09952 | 438 | shikimate transporter; Provisional | 99.37 | |
| TIGR00897 | 402 | 2A0118 polyol permease family. This family of prot | 99.37 | |
| TIGR00882 | 396 | 2A0105 oligosaccharide:H+ symporter. | 99.36 | |
| PRK10077 | 479 | xylE D-xylose transporter XylE; Provisional | 99.34 | |
| TIGR00895 | 398 | 2A0115 benzoate transport. | 99.32 | |
| PRK11010 | 491 | ampG muropeptide transporter; Validated | 99.31 | |
| PRK11273 | 452 | glpT sn-glycerol-3-phosphate transporter; Provisio | 99.31 | |
| PRK10054 | 395 | putative transporter; Provisional | 99.3 | |
| TIGR00792 | 437 | gph sugar (Glycoside-Pentoside-Hexuronide) transpo | 99.29 | |
| PF05977 | 524 | MFS_3: Transmembrane secretion effector; InterPro: | 99.28 | |
| PRK12307 | 426 | putative sialic acid transporter; Provisional | 99.27 | |
| TIGR00887 | 502 | 2A0109 phosphate:H+ symporter. This model represen | 99.25 | |
| TIGR00898 | 505 | 2A0119 cation transport protein. | 99.25 | |
| TIGR01272 | 310 | gluP glucose/galactose transporter. Disruption of | 99.25 | |
| PRK11663 | 434 | regulatory protein UhpC; Provisional | 99.25 | |
| TIGR00900 | 365 | 2A0121 H+ Antiporter protein. | 99.24 | |
| KOG2504 | 509 | consensus Monocarboxylate transporter [Carbohydrat | 99.24 | |
| PF11700 | 477 | ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 | 99.23 | |
| TIGR02718 | 390 | sider_RhtX_FptX siderophore transporter, RhtX/FptX | 99.23 | |
| PRK10504 | 471 | putative transporter; Provisional | 99.23 | |
| COG2814 | 394 | AraJ Arabinose efflux permease [Carbohydrate trans | 99.22 | |
| TIGR00712 | 438 | glpT glycerol-3-phosphate transporter. This model | 99.2 | |
| TIGR00881 | 379 | 2A0104 phosphoglycerate transporter family protein | 99.18 | |
| PF01306 | 412 | LacY_symp: LacY proton/sugar symporter; InterPro: | 99.17 | |
| PRK15075 | 434 | citrate-proton symporter; Provisional | 99.16 | |
| PF06813 | 250 | Nodulin-like: Nodulin-like; InterPro: IPR010658 Th | 99.16 | |
| PRK10406 | 432 | alpha-ketoglutarate transporter; Provisional | 99.15 | |
| PRK11646 | 400 | multidrug resistance protein MdtH; Provisional | 99.15 | |
| COG2270 | 438 | Permeases of the major facilitator superfamily [Ge | 99.14 | |
| PRK10091 | 382 | MFS transport protein AraJ; Provisional | 99.13 | |
| PLN00028 | 476 | nitrate transmembrane transporter; Provisional | 99.13 | |
| TIGR00896 | 355 | CynX cyanate transporter. This family of proteins | 99.13 | |
| PRK10213 | 394 | nepI ribonucleoside transporter; Reviewed | 99.13 | |
| PRK08633 | 1146 | 2-acyl-glycerophospho-ethanolamine acyltransferase | 99.12 | |
| KOG0569 | 485 | consensus Permease of the major facilitator superf | 99.11 | |
| PF03825 | 400 | Nuc_H_symport: Nucleoside H+ symporter | 99.1 | |
| PRK15402 | 406 | multidrug efflux system translocase MdfA; Provisio | 99.1 | |
| PF03092 | 433 | BT1: BT1 family; InterPro: IPR004324 Members of th | 99.08 | |
| PRK09848 | 448 | glucuronide transporter; Provisional | 99.07 | |
| TIGR02332 | 412 | HpaX 4-hydroxyphenylacetate permease. This protein | 99.07 | |
| PRK11902 | 402 | ampG muropeptide transporter; Reviewed | 99.06 | |
| PRK10429 | 473 | melibiose:sodium symporter; Provisional | 99.05 | |
| PRK06814 | 1140 | acylglycerophosphoethanolamine acyltransferase; Pr | 99.04 | |
| TIGR00926 | 654 | 2A1704 Peptide:H+ symporter (also transports b-lac | 99.03 | |
| TIGR00894 | 465 | 2A0114euk Na(+)-dependent inorganic phosphate cotr | 99.02 | |
| TIGR00710 | 385 | efflux_Bcr_CflA drug resistance transporter, Bcr/C | 99.01 | |
| PRK11195 | 393 | lysophospholipid transporter LplT; Provisional | 98.99 | |
| COG0477 | 338 | ProP Permeases of the major facilitator superfamil | 98.98 | |
| PRK10133 | 438 | L-fucose transporter; Provisional | 98.98 | |
| TIGR00711 | 485 | efflux_EmrB drug resistance transporter, EmrB/QacA | 98.98 | |
| PRK09669 | 444 | putative symporter YagG; Provisional | 98.98 | |
| COG2271 | 448 | UhpC Sugar phosphate permease [Carbohydrate transp | 98.97 | |
| TIGR00901 | 356 | 2A0125 AmpG-related permease. | 98.97 | |
| PF06963 | 432 | FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi | 98.96 | |
| PF07690 | 352 | MFS_1: Major Facilitator Superfamily; InterPro: IP | 98.95 | |
| PRK10473 | 392 | multidrug efflux system protein MdtL; Provisional | 98.94 | |
| KOG0253 | 528 | consensus Synaptic vesicle transporter SV2 (major | 98.94 | |
| PF13347 | 428 | MFS_2: MFS/sugar transport protein | 98.91 | |
| PRK14995 | 495 | methyl viologen resistance protein SmvA; Provision | 98.9 | |
| KOG3098 | 461 | consensus Uncharacterized conserved protein [Funct | 98.89 | |
| KOG4686 | 459 | consensus Predicted sugar transporter [Carbohydrat | 98.89 | |
| KOG0637 | 498 | consensus Sucrose transporter and related proteins | 98.86 | |
| TIGR00903 | 368 | 2A0129 major facilitator 4 family protein. This fa | 98.84 | |
| COG2223 | 417 | NarK Nitrate/nitrite transporter [Inorganic ion tr | 98.84 | |
| PRK11102 | 377 | bicyclomycin/multidrug efflux system; Provisional | 98.84 | |
| TIGR00924 | 475 | yjdL_sub1_fam amino acid/peptide transporter (Pept | 98.83 | |
| PRK11043 | 401 | putative transporter; Provisional | 98.82 | |
| TIGR00788 | 468 | fbt folate/biopterin transporter. The only functio | 98.8 | |
| TIGR00769 | 472 | AAA ADP/ATP carrier protein family. These proteins | 98.8 | |
| KOG3764 | 464 | consensus Vesicular amine transporter [Intracellul | 98.79 | |
| COG2807 | 395 | CynX Cyanate permease [Inorganic ion transport and | 98.79 | |
| PRK15034 | 462 | nitrate/nitrite transport protein NarU; Provisiona | 98.79 | |
| PRK09584 | 500 | tppB putative tripeptide transporter permease; Rev | 98.77 | |
| KOG3762 | 618 | consensus Predicted transporter [General function | 98.77 | |
| COG2211 | 467 | MelB Na+/melibiose symporter and related transport | 98.68 | |
| TIGR00885 | 410 | fucP L-fucose:H+ symporter permease. This family d | 98.67 | |
| PF03209 | 403 | PUCC: PUCC protein; InterPro: IPR004896 This prote | 98.65 | |
| PRK11462 | 460 | putative transporter; Provisional | 98.64 | |
| PRK11652 | 394 | emrD multidrug resistance protein D; Provisional | 98.62 | |
| PF06779 | 85 | DUF1228: Protein of unknown function (DUF1228); In | 98.59 | |
| PF02487 | 402 | CLN3: CLN3 protein; InterPro: IPR003492 Batten's d | 98.55 | |
| PF05978 | 156 | UNC-93: Ion channel regulatory protein UNC-93; Int | 98.54 | |
| KOG0252 | 538 | consensus Inorganic phosphate transporter [Inorgan | 98.54 | |
| KOG2532 | 466 | consensus Permease of the major facilitator superf | 98.46 | |
| TIGR00886 | 366 | 2A0108 nitrite extrusion protein (nitrite facilita | 98.46 | |
| KOG4332 | 454 | consensus Predicted sugar transporter [Carbohydrat | 98.44 | |
| PRK10207 | 489 | dipeptide/tripeptide permease B; Provisional | 98.44 | |
| PF00083 | 451 | Sugar_tr: Sugar (and other) transporter; InterPro: | 98.39 | |
| PRK15462 | 493 | dipeptide/tripeptide permease D; Provisional | 98.37 | |
| KOG2615 | 451 | consensus Permease of the major facilitator superf | 98.29 | |
| KOG3810 | 433 | consensus Micronutrient transporters (folate trans | 98.28 | |
| TIGR01301 | 477 | GPH_sucrose GPH family sucrose/H+ symporter. This | 98.27 | |
| COG0738 | 422 | FucP Fucose permease [Carbohydrate transport and m | 98.23 | |
| KOG2816 | 463 | consensus Predicted transporter ADD1 (major facili | 98.22 | |
| PF06609 | 599 | TRI12: Fungal trichothecene efflux pump (TRI12); I | 98.2 | |
| KOG3574 | 510 | consensus Acetyl-CoA transporter [Inorganic ion tr | 98.19 | |
| PF00854 | 372 | PTR2: POT family; InterPro: IPR000109 This entry r | 98.16 | |
| PTZ00207 | 591 | hypothetical protein; Provisional | 98.16 | |
| KOG0254 | 513 | consensus Predicted transporter (major facilitator | 98.15 | |
| KOG1330 | 493 | consensus Sugar transporter/spinster transmembrane | 98.15 | |
| PRK15403 | 413 | multidrug efflux system protein MdtM; Provisional | 98.12 | |
| PF03219 | 491 | TLC: TLC ATP/ADP transporter; InterPro: IPR004667 | 98.11 | |
| KOG3762 | 618 | consensus Predicted transporter [General function | 98.11 | |
| TIGR00939 | 437 | 2a57 Equilibrative Nucleoside Transporter (ENT). | 98.06 | |
| PF12832 | 77 | MFS_1_like: MFS_1 like family | 98.06 | |
| TIGR00806 | 511 | rfc RFC reduced folate carrier. Proteins of the RF | 98.02 | |
| PF12832 | 77 | MFS_1_like: MFS_1 like family | 98.01 | |
| COG3202 | 509 | ATP/ADP translocase [Energy production and convers | 98.01 | |
| TIGR00805 | 633 | oat sodium-independent organic anion transporter. | 97.84 | |
| KOG0255 | 521 | consensus Synaptic vesicle transporter SVOP and re | 97.83 | |
| PF02487 | 402 | CLN3: CLN3 protein; InterPro: IPR003492 Batten's d | 97.79 | |
| KOG2533 | 495 | consensus Permease of the major facilitator superf | 97.75 | |
| PF06813 | 250 | Nodulin-like: Nodulin-like; InterPro: IPR010658 Th | 97.7 | |
| KOG1479 | 406 | consensus Nucleoside transporter [Nucleotide trans | 97.62 | |
| TIGR00880 | 141 | 2_A_01_02 Multidrug resistance protein. | 97.6 | |
| PF13000 | 544 | Acatn: Acetyl-coenzyme A transporter 1; InterPro: | 97.42 | |
| PRK03612 | 521 | spermidine synthase; Provisional | 97.4 | |
| KOG1237 | 571 | consensus H+/oligopeptide symporter [Amino acid tr | 97.4 | |
| COG3104 | 498 | PTR2 Dipeptide/tripeptide permease [Amino acid tra | 97.3 | |
| PF03092 | 433 | BT1: BT1 family; InterPro: IPR004324 Members of th | 97.25 | |
| KOG3098 | 461 | consensus Uncharacterized conserved protein [Funct | 97.12 | |
| PF06963 | 432 | FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi | 96.94 | |
| PF05631 | 354 | DUF791: Protein of unknown function (DUF791); Inte | 96.75 | |
| KOG2563 | 480 | consensus Permease of the major facilitator superf | 96.7 | |
| PF06779 | 85 | DUF1228: Protein of unknown function (DUF1228); In | 96.62 | |
| PF07672 | 267 | MFS_Mycoplasma: Mycoplasma MFS transporter; InterP | 96.47 | |
| TIGR00939 | 437 | 2a57 Equilibrative Nucleoside Transporter (ENT). | 96.39 | |
| PF05978 | 156 | UNC-93: Ion channel regulatory protein UNC-93; Int | 96.08 | |
| KOG3097 | 390 | consensus Predicted membrane protein [Function unk | 96.05 | |
| KOG2325 | 488 | consensus Predicted transporter/transmembrane prot | 96.01 | |
| PF01770 | 412 | Folate_carrier: Reduced folate carrier; InterPro: | 95.55 | |
| PF01733 | 309 | Nucleoside_tran: Nucleoside transporter; InterPro: | 95.37 | |
| PF01733 | 309 | Nucleoside_tran: Nucleoside transporter; InterPro: | 95.25 | |
| TIGR00926 | 654 | 2A1704 Peptide:H+ symporter (also transports b-lac | 92.17 | |
| KOG1479 | 406 | consensus Nucleoside transporter [Nucleotide trans | 91.99 | |
| KOG3880 | 409 | consensus Predicted small molecule transporter inv | 91.9 | |
| COG0477 | 338 | ProP Permeases of the major facilitator superfamil | 91.34 | |
| KOG4332 | 454 | consensus Predicted sugar transporter [Carbohydrat | 90.86 | |
| KOG0637 | 498 | consensus Sucrose transporter and related proteins | 90.75 | |
| KOG3880 | 409 | consensus Predicted small molecule transporter inv | 90.1 | |
| PF07672 | 267 | MFS_Mycoplasma: Mycoplasma MFS transporter; InterP | 89.91 | |
| PF03137 | 539 | OATP: Organic Anion Transporter Polypeptide (OATP) | 87.86 | |
| KOG3810 | 433 | consensus Micronutrient transporters (folate trans | 86.52 | |
| PF06912 | 209 | DUF1275: Protein of unknown function (DUF1275); In | 84.32 | |
| PF02535 | 317 | Zip: ZIP Zinc transporter; InterPro: IPR003689 The | 83.9 | |
| PF13000 | 544 | Acatn: Acetyl-coenzyme A transporter 1; InterPro: | 83.74 | |
| COG4262 | 508 | Predicted spermidine synthase with an N-terminal m | 82.7 |
| >KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-39 Score=298.62 Aligned_cols=389 Identities=27% Similarity=0.466 Sum_probs=318.9
Q ss_pred hHHHHHHHHHHHhhhhhcccccccccccccccCCCCCC-ccccc--CCch----hHHHHHHHHHHHHHHHHHHHhhhhhh
Q 013044 48 SAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSG-ISWYD--LSSV----EIGLITSGSLYGALIGSILAFNIADI 120 (451)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~s~~----~~g~~~s~~~~~~~~~~~~~g~l~dr 120 (451)
++.....+...++.+-+||+.+.+++..+.+.+-.++. .+.+| .+++ ..+.+.+++.+|.++|+++.|.++||
T Consensus 7 ~~L~~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~ 86 (485)
T KOG0569|consen 7 RRLLLAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADR 86 (485)
T ss_pred HHHHHHHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34444556666777999999999998876654321000 01133 3333 45778899999999999999999999
Q ss_pred hcchHHHHHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHH
Q 013044 121 LGRRRELILAALLYLVGALVTALA---PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMV 197 (451)
Q Consensus 121 ~Grr~~~~~~~~l~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ 197 (451)
+|||..++++.++..++.++..++ +++.+++++|++.|+..|......+.|+.|..|.+.||....+.+.+..+|..
T Consensus 87 ~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~l 166 (485)
T KOG0569|consen 87 FGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGIL 166 (485)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHH
Confidence 999999999999988888887764 78999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhh-hcccccchhHHHhhhHHHHHHHHHHhhcccCchHHHHH-hhccccCCccchHHHHHHHHHHHhCCCCCCCC
Q 013044 198 GGYGIGSL-LVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLL-CAMKRKGDMQDLRESAISCLCRLRGQSIGDSA 275 (451)
Q Consensus 198 ~g~~l~~~-l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (451)
++..++.- +......|++.+.+..+++++..+...++||||+|+.. |+ ++++|++.++.+++.++++..
T Consensus 167 l~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~---------~~~~A~~sl~~y~G~~~~~~~ 237 (485)
T KOG0569|consen 167 LGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKG---------DEEEARKALKFYRGKEDVEAE 237 (485)
T ss_pred HHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcC---------CHHHHHHHHHHHhCCCcchhH
Confidence 99777664 22233379999999999999999999999999999987 56 889999999999998776554
Q ss_pred chhHHHHHHhhcccccccccchhhhhccc-chhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHH
Q 013044 276 PTEVDEILTELSYVGEDKEVSLREVFHGK-CLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLG 354 (451)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 354 (451)
.++..+..++.+. +++++.+++++++++ .+++..+.+.+....++.+.+.+.+|...++++.|+ +..++.+.....+
T Consensus 238 ~e~~~~e~~~~~~-~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~-~~~~a~~an~~~g 315 (485)
T KOG0569|consen 238 IEEMLREIEEEEL-EKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGF-TPEEAQYANLGIG 315 (485)
T ss_pred HHHHHHHHHHhcc-ccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCC-CHHHHHHHHHHHH
Confidence 4443333222211 223566889999986 455677778888999999999999999999999999 9999999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhhhccCCc-c---hHHHHHHHHHHHhhccccCCCceeeeee
Q 013044 355 LFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDV-P---AVAVVALLLYVGCYQVIKNFNPSKIYHF 430 (451)
Q Consensus 355 ~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (451)
+..++..+++.+++||+|||++++.+..++.++.+++.......... . +..+++.+++...++. +.+|+++.+.
T Consensus 316 ~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~--G~gpi~~fi~ 393 (485)
T KOG0569|consen 316 IVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAI--GPGPIPWFIG 393 (485)
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhc--CCCchhHHHH
Confidence 99999999999999999999999999999988888777665443322 2 2346778888899999 9999999999
Q ss_pred ecchhhhhhhhhhheeeee
Q 013044 431 RIFFFEMTRIVCSIYCAKL 449 (451)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~ 449 (451)
+|++|++.|+.+.+++.++
T Consensus 394 aELf~~~~R~aa~s~~~~~ 412 (485)
T KOG0569|consen 394 AELFPQSARSAAQSVATAV 412 (485)
T ss_pred HHhCCccchHHHHHHHHHH
Confidence 9999999999999887654
|
|
| >TIGR01299 synapt_SV2 synaptic vesicle protein SV2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=311.68 Aligned_cols=377 Identities=19% Similarity=0.197 Sum_probs=286.5
Q ss_pred hHHHHHHHHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHH
Q 013044 48 SAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRREL 127 (451)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~ 127 (451)
+..|.++++++++.+..+++...++..+|.+.++ ++++..+.+++.+++.++.+++++++|+++||+|||+++
T Consensus 163 ~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~-------~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~l 235 (742)
T TIGR01299 163 RFQWALFFVLGLALMADGVEVFVVGFVLPSAEKD-------LCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCL 235 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH
Confidence 4566677788888899999999999999999887 899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhc
Q 013044 128 ILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLV 207 (451)
Q Consensus 128 ~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~ 207 (451)
++++++.+++.++++++++++.++++|++.|++.|+..+...+++.|++|+++|++.+++..+++.+|.++++.++..+.
T Consensus 236 ii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il 315 (742)
T TIGR01299 236 LICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAII 315 (742)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998876655
Q ss_pred ccc------------cchhHHHhhhHHHHHHHHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCC-
Q 013044 208 DLV------------AGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDS- 274 (451)
Q Consensus 208 ~~~------------~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 274 (451)
... .+||+.+++.++++++.++..+++||+|+|+..++ +.+++.+.++++++.+....
T Consensus 316 ~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~g---------r~~eA~~iL~~i~~~n~~~~~ 386 (742)
T TIGR01299 316 PHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENG---------KHDEAWMILKLIHDTNMRAKG 386 (742)
T ss_pred HhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCC---------CHHHHHHHHHHHhcCCCCCcC
Confidence 321 27999999998888887788888999999998877 77888888888876543211
Q ss_pred Cchh---HHHHHHh--h----ccccccc-----------------ccchhhhhcccchhHHHHHHHHHHHHHhhchhHHH
Q 013044 275 APTE---VDEILTE--L----SYVGEDK-----------------EVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVL 328 (451)
Q Consensus 275 ~~~~---~~~~~~~--~----~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (451)
.+.. .+..... . +..+... ..+++++++.+.+++.++..+ .++....+++.+.
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~-~wf~~~~~yygl~ 465 (742)
T TIGR01299 387 HPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMG-VWFTLSFGYYGLS 465 (742)
T ss_pred chhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 1110 0010000 0 0000000 013556666655555555444 4555566778888
Q ss_pred HhHHHHHHHc------------------------------------------CC-----C---C----------------
Q 013044 329 YYAASILQSA------------------------------------------GF-----S---A---------------- 342 (451)
Q Consensus 329 ~~~~~~~~~~------------------------------------------~~-----~---s---------------- 342 (451)
.|.|.++++. |+ . +
T Consensus 466 ~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (742)
T TIGR01299 466 VWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTF 545 (742)
T ss_pred HHHHHHHHHHHHHHHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchh
Confidence 9999875431 00 0 0
Q ss_pred ------------------------------------------------chhHHHHHHHHHHHHHHHHHHHHHHhhhcCCc
Q 013044 343 ------------------------------------------------ASDATRVSILLGLFKLIMTGLAVLVVERLGRR 374 (451)
Q Consensus 343 ------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~ 374 (451)
.........+..++.+++.++.++++||+|||
T Consensus 546 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr 625 (742)
T TIGR01299 546 FKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRL 625 (742)
T ss_pred hhccchhhhhccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH
Confidence 00123445677789999999999999999999
Q ss_pred hhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheeeee
Q 013044 375 PLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCAKL 449 (451)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (451)
++++++.++.+++.+++++. .+.+..++..++++++.+. ..+..+.++.|++|++.|+++.|++.++
T Consensus 626 ~~l~~~~~lsai~~ll~~~~-----~s~~~ll~~~~l~g~~~~~---~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~ 692 (742)
T TIGR01299 626 RMLAGSMVLSCISCFFLSFG-----NSESAMIALLCLFGGLSIA---AWNALDVLTVELYPSDKRATAFGFLNAL 692 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHH-----ccHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 99998888888877766542 2233333334444443333 4566788999999999999999987653
|
This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices. |
| >KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-38 Score=305.51 Aligned_cols=388 Identities=37% Similarity=0.554 Sum_probs=315.9
Q ss_pred chHHHHHHHHHHHhhhhhccc--ccccccccccccCCCCCCcccccCCc--hhHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 013044 47 VSAAILPFLFPALGGLLYGYD--IGSTSCATISIESPTLSGISWYDLSS--VEIGLITSGSLYGALIGSILAFNIADILG 122 (451)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~g~~~s~~~~~~~~~~~~~g~l~dr~G 122 (451)
............++.+..+++ .+...+....+.++..... ...+. .+.+|+.++..++..++++++|+++|++|
T Consensus 40 ~~~~~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~--~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~G 117 (513)
T KOG0254|consen 40 SPFVILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYD--LSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIG 117 (513)
T ss_pred ceehHHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccc--cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 334455556667788888886 6677777777766422211 12222 56699999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHH
Q 013044 123 RRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGI 202 (451)
Q Consensus 123 rr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l 202 (451)
||+.++++.+++.+|.+++++++|+++++++|+++|+|.|....+.+.+++|..|++.||...+..+....+|..++..+
T Consensus 118 Rk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~ 197 (513)
T KOG0254|consen 118 RKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCI 197 (513)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999766
Q ss_pred hhhhcccccchhHHHhhhHHHHHHHHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHH
Q 013044 203 GSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEI 282 (451)
Q Consensus 203 ~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (451)
+....+...+||..+.+..+++++..+..+++||+|+|+.+++ +.+++++.++++++.+.. +...+.++.
T Consensus 198 ~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g---------~~~~a~~~l~~l~g~~~~-~~~~~~~~~ 267 (513)
T KOG0254|consen 198 NYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKG---------RLEEAKRSLKRLRGLSPE-DVEVELELL 267 (513)
T ss_pred hhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcC---------ChHHHHHHHHHHhCCCCc-chHHHHHHH
Confidence 6666443128999999999999997777889999999999876 889999999999985522 222222222
Q ss_pred HHh--hcccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHH
Q 013044 283 LTE--LSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIM 360 (451)
Q Consensus 283 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 360 (451)
... .+....+.+..+.++++....++..+...+..+.++++++...+|.+.+++..|..+.. .......++..+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~--~~~~~~~~~v~~~~ 345 (513)
T KOG0254|consen 268 KIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT--FLASIILGVVNFLG 345 (513)
T ss_pred HHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch--HHHHHHHHHHHHHH
Confidence 211 11111222224677777567788888999999999999999999999999999983333 66777888888888
Q ss_pred HHHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhhhccC-------CcchHHHHHHHHHHHhhccccCCCceeeeeeecc
Q 013044 361 TGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLD-------DVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIF 433 (451)
Q Consensus 361 ~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (451)
..++.++.||+|||++++.+...+.++.++++....... ...+..++..+++...+.. ++.|+++.+.+|.
T Consensus 346 t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~--g~g~v~w~~~sEi 423 (513)
T KOG0254|consen 346 TLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAI--GWGPVPWVIVSEI 423 (513)
T ss_pred HHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhc--ccccchhhhhhcc
Confidence 889999999999999999999999999998887765432 2356778888888899999 9999999999999
Q ss_pred hhhhhhhhhhheeeeec
Q 013044 434 FFEMTRIVCSIYCAKLR 450 (451)
Q Consensus 434 ~~~~~~~~~~~~~~~~~ 450 (451)
+|.+.|+.+.++++++.
T Consensus 424 fp~~~r~~~~s~~~~~n 440 (513)
T KOG0254|consen 424 FPLRLRSKGASLAVAVN 440 (513)
T ss_pred CcHhHHhhhHHHHHHHH
Confidence 99999999999887653
|
|
| >PRK10077 xylE D-xylose transporter XylE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-36 Score=290.07 Aligned_cols=378 Identities=29% Similarity=0.500 Sum_probs=275.8
Q ss_pred HHHHHHHHHHhhhhhcccccccccccccccCCCCCC-cccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHH
Q 013044 50 AILPFLFPALGGLLYGYDIGSTSCATISIESPTLSG-ISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELI 128 (451)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~ 128 (451)
........+++.+.++++...+++..|.+.++..+. .++++.++.+.+++.+++.++..++++++|+++||+|||++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~ 89 (479)
T PRK10077 10 IFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLK 89 (479)
T ss_pred HHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 444556666788999999999999999887763211 1114889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHh------------hhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHH
Q 013044 129 LAALLYLVGALVTALA------------PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGM 196 (451)
Q Consensus 129 ~~~~l~~~~~~~~~~~------------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~ 196 (451)
++.++.+++.++++++ ++++.++++|+++|++.|...+...++++|++|+++|++++++.+.+..+|.
T Consensus 90 ~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~ 169 (479)
T PRK10077 90 IAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQ 169 (479)
T ss_pred HHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHH
Confidence 9999999999888763 2357788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhc--------ccccchhHHHhhhHHHHHHHHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhC
Q 013044 197 VGGYGIGSLLV--------DLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRG 268 (451)
Q Consensus 197 ~~g~~l~~~l~--------~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (451)
++++.+++.+. +.. +||+.|++.+++.++..+..+++||+|+++..++ +.+++.+..++..+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~-gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~---------~~~~~~~~~~~~~~ 239 (479)
T PRK10077 170 LVVYFVNYFIARSGDASWLNTD-GWRYMFASEAIPALLFLMLLYFVPETPRYLMSRG---------KQEQAEGILRKIMG 239 (479)
T ss_pred HHHHHHHHHHhccCcccccccC-ChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcC---------CHHHHHHHHHHHcC
Confidence 99988876553 234 8999999988888776666778999998875544 33444444444432
Q ss_pred CCCCCCCchhHHHHHHhhcccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHH
Q 013044 269 QSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATR 348 (451)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 348 (451)
.... ....++..+.... + +...+..+. ..............+.+..+++...+|.|.+.++.|. +......
T Consensus 240 ~~~~---~~~~~~~~~~~~~-~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~-~~~~~~~ 310 (479)
T PRK10077 240 NTLA---TQALQEIKHSLDH-G---RKTGGKLLM-FGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGA-STDIALL 310 (479)
T ss_pred ChhH---HHHHHHHHHHHHH-h---hhhhhhhcc-hhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCC-CCchHHH
Confidence 2111 1111111111000 0 000111111 1112222223334445555666777888999888888 7677777
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeee
Q 013044 349 VSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIY 428 (451)
Q Consensus 349 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (451)
.....++..+++.++.++++||+|||+.++.+.++..++.+++...... ..........++++.++++. .+.|..+.
T Consensus 311 ~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 387 (479)
T PRK10077 311 QTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYT-QAPGIVALLSMLFYVAAFAM--SWGPVCWV 387 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhc-CcccHHHHHHHHHHHHHHhc--cccchhHH
Confidence 8888889999999999999999999999999998888887776543221 11222333445555556665 56788889
Q ss_pred eeecchhhhhhhhhhheeeee
Q 013044 429 HFRIFFFEMTRIVCSIYCAKL 449 (451)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~ 449 (451)
++.|.+|++.|+++.+++.++
T Consensus 388 ~~~e~~p~~~r~~~~g~~~~~ 408 (479)
T PRK10077 388 LLSEIFPNAIRGKALAIAVAA 408 (479)
T ss_pred HhHhhCChhHHHHHHHHHHHH
Confidence 999999999999999986553
|
|
| >TIGR00887 2A0109 phosphate:H+ symporter | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-36 Score=292.29 Aligned_cols=381 Identities=20% Similarity=0.207 Sum_probs=267.7
Q ss_pred HHHHHHHHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHH
Q 013044 49 AAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELI 128 (451)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~ 128 (451)
..+..+.++.++.+.++++...++...|.+..+.... +.+.++.+.+++.+.+.++..++++++|+++||+|||+++.
T Consensus 13 ~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~ 90 (502)
T TIGR00887 13 QHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHG--KGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYG 90 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC--cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHH
Confidence 3444556777888999999999999888876531111 13556778899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhh------HHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHH
Q 013044 129 LAALLYLVGALVTALAPD------FIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGI 202 (451)
Q Consensus 129 ~~~~l~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l 202 (451)
++.++..++.++++++++ ++.++++|+++|++.|...+...++++|++|+++|++++++.+....+|.++++.+
T Consensus 91 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~ 170 (502)
T TIGR00887 91 MELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIV 170 (502)
T ss_pred HHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998876 78999999999999999999999999999999999999999999999999999988
Q ss_pred hhhhcc----------------------cccchhHHHhhhHHHHHHHHHHhhcccCchHHHHHhhccccCCccchHHHHH
Q 013044 203 GSLLVD----------------------LVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAI 260 (451)
Q Consensus 203 ~~~l~~----------------------~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 260 (451)
+..+.. ...+||++|.+.++++++.++..+++||+|+|+..+++ +++++.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~--------~~~~a~ 242 (502)
T TIGR00887 171 ALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAK--------DVEQAA 242 (502)
T ss_pred HHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCc--------chHHHH
Confidence 876532 01279999999888888877778889999999977662 113345
Q ss_pred HHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhcccchh---HHHHHHHHHHHHHhhchhHHHHhHHHHHHH
Q 013044 261 SCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLK---ALIIGAGLVLFQQITGQPSVLYYAASILQS 337 (451)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (451)
+.+++..+.+.+++ ..+.++..+ .+++.+.+++++++++..+ +..+.....++.....++....|.|.++++
T Consensus 243 ~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~ 317 (502)
T TIGR00887 243 SDMSAVLQVKIEAE-PDEVEKAST----AVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA 317 (502)
T ss_pred HHHHHHhccccccC-cccccchhc----cccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH
Confidence 55555443221111 111111100 0111123577777643212 223322222232223334556678888888
Q ss_pred cCCCCchhHH------------HHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHH
Q 013044 338 AGFSAASDAT------------RVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVA 405 (451)
Q Consensus 338 ~~~~s~~~~~------------~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (451)
.|+ +...++ .......++.+++.++.++++||+|||+.++.+..+..++..+++......... ..
T Consensus 318 ~G~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~--~~ 394 (502)
T TIGR00887 318 IGY-SPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTH--GF 394 (502)
T ss_pred HcC-CCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchh--HH
Confidence 887 433211 123344566777889999999999999998888877777666655432111111 11
Q ss_pred HHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheeeee
Q 013044 406 VVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCAKL 449 (451)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (451)
....+++...++. +..+..+.+..|.+|++.|+++.++++++
T Consensus 395 ~~~~~~~~~~~~~--~~~~~~~~~~~E~~p~~~R~~~~g~~~~~ 436 (502)
T TIGR00887 395 LAIYVLAQFFANF--GPNATTFIVPGEVFPTRYRSTAHGISAAS 436 (502)
T ss_pred HHHHHHHHHHHhc--CCCchhhhhhhccCchhHHHHHHHHHHHH
Confidence 2222222333445 56778888899999999999999987654
|
This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083). |
| >TIGR00879 SP MFS transporter, sugar porter (SP) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=287.13 Aligned_cols=389 Identities=33% Similarity=0.522 Sum_probs=279.2
Q ss_pred hHHHHHHHHHHHhhhhhcccccccccccccccCCCCC-CcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHH
Q 013044 48 SAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLS-GISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRE 126 (451)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~ 126 (451)
+..+...++..++.++.+++...+++..|.+..+... .+..-+.+..+.+++.+++.++..++++++|+++||+|||++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~ 103 (481)
T TIGR00879 24 WKVALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKS 103 (481)
T ss_pred HHHHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHH
Confidence 4444455666777788999999999999988776110 000012448999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHh
Q 013044 127 LILAALLYLVGALVTALAP---DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIG 203 (451)
Q Consensus 127 ~~~~~~l~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~ 203 (451)
++++.++..++.+++.+.. +++.++++|+++|++.+...+...+++.|++|+++|++++++.+.+..+|.++++.++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~ 183 (481)
T TIGR00879 104 LLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFG 183 (481)
T ss_pred HHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 9999999999999996643 4568999999999999999999999999999999999999999999999999999999
Q ss_pred ---hhhcccccchhHHHhhhHHHHHHHHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchh-H
Q 013044 204 ---SLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTE-V 279 (451)
Q Consensus 204 ---~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 279 (451)
....+.. +||+.|++.++..++.++..+++||+|++...++ +.+++.+..++..+....+....+ .
T Consensus 184 ~~~~~~~~~~-~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (481)
T TIGR00879 184 SGKVSLNNTL-GWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKG---------RVEEARKSLARLRGTSGEDKELLDEL 253 (481)
T ss_pred HHhhcCCCCc-cHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcC---------ChHHHHHHHHHHhCCCCCcHHHHHHH
Confidence 6665665 9999999977777666677778899988654433 122222333332222211111000 0
Q ss_pred HHHHHhhcccccccccchhhhhccc--chhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHH
Q 013044 280 DEILTELSYVGEDKEVSLREVFHGK--CLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFK 357 (451)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 357 (451)
.......+...+..+..+.+.++.. ..++.++...+..+..........++.|.+.++.|+ +..+.+....+..++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~ 332 (481)
T TIGR00879 254 ELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGV-STDHAFLVSIIVGAVN 332 (481)
T ss_pred HHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCC-CchHHHHHHHHHHHHH
Confidence 0000000000111111234444322 234555555556665555666778888999999999 7788889999999999
Q ss_pred HHHHHHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhhhccCCc-----chHHHHHHHHHHHhhccccCCCceeeeeeec
Q 013044 358 LIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDV-----PAVAVVALLLYVGCYQVIKNFNPSKIYHFRI 432 (451)
Q Consensus 358 ~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (451)
+++.++.+++.||++||+.+..+..+.+++.++++......... .+..+....++..+++. +..+....+..|
T Consensus 333 ~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 410 (481)
T TIGR00879 333 FAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAM--GWGPVPWVIVSE 410 (481)
T ss_pred HHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHc--cccCeehhhhhc
Confidence 99999999999999999998888777777766665322211111 34444455556666666 677888888899
Q ss_pred chhhhhhhhhhheeeee
Q 013044 433 FFFEMTRIVCSIYCAKL 449 (451)
Q Consensus 433 ~~~~~~~~~~~~~~~~~ 449 (451)
.+|++.|+++.++....
T Consensus 411 ~~p~~~~~~~~~~~~~~ 427 (481)
T TIGR00879 411 IFPLSLRPKGISIAVAA 427 (481)
T ss_pred cCChHHHHHHHHHHHHH
Confidence 99999999998876543
|
This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083) |
| >TIGR02332 HpaX 4-hydroxyphenylacetate permease | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=272.11 Aligned_cols=364 Identities=16% Similarity=0.108 Sum_probs=252.8
Q ss_pred HHHHHHHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHH
Q 013044 50 AILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELIL 129 (451)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~ 129 (451)
.|..+.++++.++++++|...++...|.+.+| +|++..+.|++.+++.+++++++++.|+++||+|||+++..
T Consensus 6 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~-------~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~ 78 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDRINIGFAGLTMGKD-------LGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAG 78 (412)
T ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhh-------cCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHH
Confidence 34555667778888999999999999999888 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhccc
Q 013044 130 AALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL 209 (451)
Q Consensus 130 ~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~ 209 (451)
+.++++++.+++++++|++.++++|+++|++.+...+....++.|++|+++|++++++++.+.++|.++++++++++.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~ 158 (412)
T TIGR02332 79 IMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILAL 158 (412)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987631
Q ss_pred -----ccchhHHHhhhHHHHHH-HHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHH
Q 013044 210 -----VAGWRYMYGASTPLAVI-MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEIL 283 (451)
Q Consensus 210 -----~~~wr~~f~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (451)
..|||+.|++.++++++ ..+.++++||+|+.. +..+ .++.+...+..++...+.+.+.. .
T Consensus 159 ~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~------~~l~----~~~~~~~~~~~~~~~~~~~~~~~--~-- 224 (412)
T TIGR02332 159 DGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKA------KWLD----EEDKKALKEMIDNDQLTLEQPEG--A-- 224 (412)
T ss_pred CCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccC------CCCC----HHHHHHHHHHHHhcccccccccc--c--
Confidence 13999999998888777 455566788887520 0000 01111111111111100000000 0
Q ss_pred HhhcccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHc--CCCCchhHHHHHHHHHHHHHHHH
Q 013044 284 TELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSA--GFSAASDATRVSILLGLFKLIMT 361 (451)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~~~~~~~~~~~~~~~~~~ 361 (451)
.+......+..++++++ + . ++...+..++....+..+..|.|.++++. ++ +..+++.......++.+++.
T Consensus 225 --~~~~~~~~~~~~~~~~~-~---~-~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~-s~~~~~~~~~~~~l~~~~g~ 296 (412)
T TIGR02332 225 --FAHAAMPQRSMLREIFT-P---A-IMLYTLAYFCLTNTLSAINIWTPQILQSFNQGS-SNIMIGLLAAIPQFCTIFGM 296 (412)
T ss_pred --cccccccHHHHHHHhcC-h---H-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-cHHHhHHHhhHHHHHHHHHH
Confidence 00000000112333332 2 2 22333333334445567788999999875 55 67788889999999999999
Q ss_pred HHHHHHhhhcCCchh-hhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhh
Q 013044 362 GLAVLVVERLGRRPL-LLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRI 440 (451)
Q Consensus 362 ~~~g~l~d~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (451)
++.|+++||+++|+. .........++. ++... ..........+.+...+... ..+..+....|.+|++.|+
T Consensus 297 l~~g~l~dr~~~r~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~ 368 (412)
T TIGR02332 297 IWWSRHSDRLKERKHHTALPYLFAAAGW-LLASA----TDHNLIQLLGIIMASMGSFS---AMAIFWTTPDQSISLQARA 368 (412)
T ss_pred HHHHHHhcccCccHHHHHHHHHHHHHHH-HHHHh----cCCHHHHHHHHHHHHHHhhh---hhhHHHhhcccccchHHHH
Confidence 999999999997774 333333333322 22111 12222222222222222211 2334455667889999999
Q ss_pred hhhheeeeec
Q 013044 441 VCSIYCAKLR 450 (451)
Q Consensus 441 ~~~~~~~~~~ 450 (451)
++.|+.++.+
T Consensus 369 ~a~g~~~~~~ 378 (412)
T TIGR02332 369 IAIAVINATG 378 (412)
T ss_pred HHHHHHHHhh
Confidence 9999877654
|
This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially. |
| >COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-34 Score=257.83 Aligned_cols=328 Identities=22% Similarity=0.268 Sum_probs=253.2
Q ss_pred HHHHHHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHH
Q 013044 51 ILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILA 130 (451)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~ 130 (451)
+..+..+.++.|..+.+.......+|++.+| |++|..+.|+..|+|.+++.++.++...+.||+.||++++..
T Consensus 12 ~~~l~aLa~~~F~igttEfv~~gLLp~iA~d-------l~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~ 84 (394)
T COG2814 12 WLALLALALAAFAIGTTEFVPVGLLPPIAAD-------LGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGL 84 (394)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHhchHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHH
Confidence 3444666778888899999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccc
Q 013044 131 ALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV 210 (451)
Q Consensus 131 ~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~ 210 (451)
+.++.++++++++++||+.++++|++.|++.|..++...++..+..|+++|++++++...+..++.++|.+++.++.+..
T Consensus 85 l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~ 164 (394)
T COG2814 85 LALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLF 164 (394)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cchhHHHhhhHHHHHH-HHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhccc
Q 013044 211 AGWRYMYGASTPLAVI-MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYV 289 (451)
Q Consensus 211 ~~wr~~f~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (451)
|||+.|++.+.++++ .+..+..+| |+.. . ..
T Consensus 165 -GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~---~------------------------------------------~~ 196 (394)
T COG2814 165 -GWRATFLAIAVLALLALLLLWKLLP--PSEI---S------------------------------------------GS 196 (394)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHhCC--CccC---C------------------------------------------CC
Confidence 999999999999988 555666678 2100 0 00
Q ss_pred ccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHH-HHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHh
Q 013044 290 GEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASIL-QSAGFSAASDATRVSILLGLFKLIMTGLAVLVV 368 (451)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~ 368 (451)
.+.+..+..+.++++..+..++...+.. .+.+....|...++ +..|+ +....++....++++.++|..++|++.
T Consensus 197 ~~~~~~~~~~~l~~p~v~~~l~~t~l~~----~g~F~~ftYi~P~L~~v~g~-s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~ 271 (394)
T COG2814 197 LPGPLRTLLRLLRRPGVLLGLLATFLFM----TGHFALYTYIRPFLESVAGF-SVSAVSLVLLAFGIAGFIGNLLGGRLA 271 (394)
T ss_pred CCcchhHHHHHhcCchHHHHHHHHHHHH----cchhhhHHhHHHHHHHccCC-CHhHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 1111123456667655555444443333 33344445554454 45677 999999999999999999999999999
Q ss_pred hhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheee
Q 013044 369 ERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCA 447 (451)
Q Consensus 369 d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (451)
|| +.|+.+.....+..+..+.+.+. ..+.+...+...+++..... ......+-..+. -++.+..+.++..
T Consensus 272 dr-~~~~~l~~~~~l~a~~~l~l~~~----~~~~~~~~~~~~~wg~a~~~---~~~~~~~~~a~~-~p~~~~~a~sl~~ 341 (394)
T COG2814 272 DR-GPRRALIAALLLLALALLALTFT----GASPALALALLFLWGFAFSP---ALQGLQTRLARL-APDAADLAGSLNV 341 (394)
T ss_pred cc-cchhHHHHHHHHHHHHHHHHHHh----cchHHHHHHHHHHHHHHhhh---hhhHHHHHhccc-CCCchHHHHHHHH
Confidence 99 88888877777777666655433 34445554444443333332 122222333342 2455666665543
|
|
| >PRK14995 methyl viologen resistance protein SmvA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=277.25 Aligned_cols=378 Identities=14% Similarity=0.073 Sum_probs=270.7
Q ss_pred HHHHHHHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHH
Q 013044 50 AILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELIL 129 (451)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~ 129 (451)
.|..+..++++.++..+|.++++..+|.+.+| +|.+.++.+|+.+.|.+++.++++++|+++||+|||+++++
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~-------l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~ 76 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVAAPTLSMT-------LGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLML 76 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 35567888899999999999999999999998 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhcc-CCCCcchHHHHHHHHHHHHHHHHHHHhhhhcc
Q 013044 130 AALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETA-PTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD 208 (451)
Q Consensus 130 ~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~ 208 (451)
+.++++++++++++++|++.++++|+++|+|.+...+.....+.+.+ |+++|++++++......+|..+||.+++++.+
T Consensus 77 ~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~ 156 (495)
T PRK14995 77 GGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLE 156 (495)
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999998888887776 67899999999999999999999999999999
Q ss_pred cccchhHHHhhhHHHHHH-HHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHH---HHhCCCCCCCCchhHHH---
Q 013044 209 LVAGWRYMYGASTPLAVI-MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLC---RLRGQSIGDSAPTEVDE--- 281 (451)
Q Consensus 209 ~~~~wr~~f~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~--- 281 (451)
+. +|||.|++...++++ ..+..+++|++++ ++.++.|..+.......... .+.+....+........
T Consensus 157 ~~-gwr~~f~i~~~~~~~~~~l~~~~l~~~~~-----~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 230 (495)
T PRK14995 157 HF-YWGSVFLINVPIVLVVMGLTARYVPRQAG-----RRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLL 230 (495)
T ss_pred cC-ChHHHHHHHHHHHHHHHHHHHHhCCCCCC-----CCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHH
Confidence 87 999999998887777 4445556677542 11122232222211111111 11111111111100000
Q ss_pred -----HHH-hhcccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHH-cCCCCchhHHHHHHHHH
Q 013044 282 -----ILT-ELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLG 354 (451)
Q Consensus 282 -----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~ 354 (451)
... ...+.+.+++.-..++++++......+..+.. ........++.|.+++. .|+ ++.+++....+..
T Consensus 231 ~~~~~l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~lq~v~g~-s~~~ag~~~~~~~ 305 (495)
T PRK14995 231 TGALLLGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTA----MITLVGFELLMAQELQFVHGL-SPLEAGMFMLPVM 305 (495)
T ss_pred HHHHHHHHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHH----HHHHHHHHHHHHHHHHHHcCC-CHHHHHHHHHHHH
Confidence 000 00001112222234567765444333322222 22233556677888776 577 9999999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecch
Q 013044 355 LFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFF 434 (451)
Q Consensus 355 ~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (451)
++..++.++.|++.||+|+|+.+..+..+..++.+++... ....+.+......++.+.+.+. ..+.......+..
T Consensus 306 ~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~--~~~~~~~~~~~~~~l~G~g~g~---~~~~~~~~~~~~~ 380 (495)
T PRK14995 306 VASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMT--DFSTQQWQAWGLMALLGFSAAS---ALLASTSAIMAAA 380 (495)
T ss_pred HHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHh--cCCCchHHHHHHHHHHHHhHHH---HHHHHHHHHHhcC
Confidence 9999999999999999999998888877776666554432 1123334444455555666665 3344455556678
Q ss_pred hhhhhhhhhheeeeec
Q 013044 435 FEMTRIVCSIYCAKLR 450 (451)
Q Consensus 435 ~~~~~~~~~~~~~~~~ 450 (451)
|++.++.+.++.+..|
T Consensus 381 ~~~~~g~~~~~~~~~~ 396 (495)
T PRK14995 381 PPEKAAAAGAIETMAY 396 (495)
T ss_pred CHHhcchHHHHHHHHH
Confidence 8999999988776544
|
|
| >PRK10642 proline/glycine betaine transporter; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-34 Score=273.99 Aligned_cols=344 Identities=18% Similarity=0.250 Sum_probs=238.9
Q ss_pred HHHHHHHhhhhhcccccccccccccccCCCCCCcccccCCchh----HHH--HHHHHHHHHHHHHHHHhhhhhhhcchHH
Q 013044 53 PFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVE----IGL--ITSGSLYGALIGSILAFNIADILGRRRE 126 (451)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~----~g~--~~s~~~~~~~~~~~~~g~l~dr~Grr~~ 126 (451)
.+....++.+++++|...++...|.+.++ +..+.++ .+. +.++.++++.+++++.|+++||+|||++
T Consensus 17 ~~~~~~~g~~~~~~d~~~~~~~~~~i~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~ 89 (490)
T PRK10642 17 AITAASLGNAMEWFDFGVYGFVAYALGKV-------FFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKI 89 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------hCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHH
Confidence 34556778899999999999999998877 5432211 222 2578889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHH--------HHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHH
Q 013044 127 LILAALLYLVGALVTALAPDFII--------MVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVG 198 (451)
Q Consensus 127 ~~~~~~l~~~~~~~~~~~~~~~~--------l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 198 (451)
+.+++++++++++++++++|++. ++++|+++|++.|+..+...++++|++|+++||++.++...+..+|..+
T Consensus 90 l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~l 169 (490)
T PRK10642 90 LAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVL 169 (490)
T ss_pred HHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHH
Confidence 99999999999999999999874 8999999999999999999999999999999999999999888888888
Q ss_pred HHHHhhhhc--------ccccchhHHHhhhHHHHHHHHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCC
Q 013044 199 GYGIGSLLV--------DLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQS 270 (451)
Q Consensus 199 g~~l~~~l~--------~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (451)
++.+...+. ... |||++|++.+++.++.++....+||+|++...+++. ++.. +
T Consensus 170 g~~~~~~~~~~~~~~~~~~~-gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~---------~~~~-------~-- 230 (490)
T PRK10642 170 GAGVVVLISTIVGEANFLDW-GWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKL---------EQGD-------R-- 230 (490)
T ss_pred HHHHHHHHHHhcCHHHhcCc-cHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhh---------hhhc-------c--
Confidence 886665432 134 999999998776666555666789999865322200 0000 0
Q ss_pred CCCCCchhHHHHHHhhcccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHH-HcCCCCchhHHHH
Q 013044 271 IGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQ-SAGFSAASDATRV 349 (451)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~ 349 (451)
+ ...++++.++++++++ +++......... +.....++....|.|.+++ ..|+ +..+....
T Consensus 231 -~---------------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~l~~~~g~-s~~~~~~~ 291 (490)
T PRK10642 231 -E---------------GLQDGPKVSFKEIATK-HWRSLLTCIGLV-IATNVTYYMLLTYMPSYLSHNLHY-SEDHGVLI 291 (490)
T ss_pred -c---------------cccccccCCHHHHHHH-hHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCC-CHHHHHHH
Confidence 0 0001122345566653 223333322222 2223345566778888885 4587 77777777
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeee
Q 013044 350 SILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYH 429 (451)
Q Consensus 350 ~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (451)
.....++.+++.++.|+++||+|||+.+..+.+...++...+... ....+....++..++.+.+.+. .......+
T Consensus 292 ~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~---~~g~~~~~ 366 (490)
T PRK10642 292 IIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFIL--INSNVIGLIFAGLLMLAVILNC---FTGVMAST 366 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH--HhCCCHHHHHHHHHHHHHHHHH---HHHHHHHH
Confidence 788889999999999999999999998877665433322221111 1112222333333333333333 12233455
Q ss_pred eecchhhhhhhhhhhee
Q 013044 430 FRIFFFEMTRIVCSIYC 446 (451)
Q Consensus 430 ~~~~~~~~~~~~~~~~~ 446 (451)
..|.+|++.|+++.++.
T Consensus 367 ~~~~~p~~~Rg~~~g~~ 383 (490)
T PRK10642 367 LPAMFPTHIRYSALAAA 383 (490)
T ss_pred HHHHCCCccchHHHHHH
Confidence 66889999999988753
|
|
| >PRK10406 alpha-ketoglutarate transporter; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=268.96 Aligned_cols=334 Identities=16% Similarity=0.142 Sum_probs=232.4
Q ss_pred HHHHHHHhhhhhcccccccccccccccCCCCCCcccc---cCCchhHHHHH---HHHHHHHHHHHHHHhhhhhhhcchHH
Q 013044 53 PFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWY---DLSSVEIGLIT---SGSLYGALIGSILAFNIADILGRRRE 126 (451)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~s~~~~g~~~---s~~~~~~~~~~~~~g~l~dr~Grr~~ 126 (451)
.+...+++.+++.+|...++...|.+.++ + +.+..+.+... +..+++..++++++|+++||+|||++
T Consensus 23 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~ 95 (432)
T PRK10406 23 AIVGASSGNLVEWFDFYVYSFCSLYFAHI-------FFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKS 95 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHH
Confidence 44555678889999999999999988877 5 34455444444 44455555999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhHH--------HHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHH
Q 013044 127 LILAALLYLVGALVTALAPDFI--------IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVG 198 (451)
Q Consensus 127 ~~~~~~l~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 198 (451)
+..+.++++++++++++++++. .++++|+++|++.|+..+...++++|++|+++|+++.++.+.+...|.++
T Consensus 96 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~ 175 (432)
T PRK10406 96 MLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLL 175 (432)
T ss_pred HHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHH
Confidence 9999999999999999998864 58999999999999999999999999999999999999999888888888
Q ss_pred HHHHhhhhcc--------cccchhHHHhhhHHHHHHHHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCC
Q 013044 199 GYGIGSLLVD--------LVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQS 270 (451)
Q Consensus 199 g~~l~~~l~~--------~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (451)
++.+...+.. .. |||++|++.++++++.......+||+|++..++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~-gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~~~-------------------------- 228 (432)
T PRK10406 176 ALLVVVVLQQTLEDAELREW-GWRIPFALGAVLAVVALWLRRQLDETSQQETRA-------------------------- 228 (432)
T ss_pred HHHHHHHHHHhCCHHHHhcc-chHHHHHHHHHHHHHHHHHHhcCCCCchHHHhh--------------------------
Confidence 8877655432 34 999999998888777655555567765421000
Q ss_pred CCCCCchhHHHHHHhhcccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHH-cCCCCchhHHHH
Q 013044 271 IGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRV 349 (451)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~ 349 (451)
.+++.+++++++++. .+.......+.....++.+..|.|.++++ .|+ +..+.+..
T Consensus 229 --------------------~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~-s~~~~~~~ 284 (432)
T PRK10406 229 --------------------LKEAGSLKGLWRNRR---AFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGM-HANVASGI 284 (432)
T ss_pred --------------------hcccccHHHHHhhHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CHHHHHHH
Confidence 001123556666432 22222222222122344566788887754 687 77788888
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeee
Q 013044 350 SILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYH 429 (451)
Q Consensus 350 ~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (451)
.....+...++..+.|+++||++||+.+..+..+..+....+.... ....+.+..+....+.....+. ..+....+
T Consensus 285 ~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 360 (432)
T PRK10406 285 MTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSAL-QNVSSPYAAFGLVMCALLIVSF---YTSISGIL 360 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHH-HcCCcHHHHHHHHHHHHHHHHH---HHHHHHHH
Confidence 8888888888899999999999999877665544333222111111 1112222222222222222222 22345577
Q ss_pred eecchhhhhhhhhhheeee
Q 013044 430 FRIFFFEMTRIVCSIYCAK 448 (451)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~ 448 (451)
..|.+|++.|+++.|++.+
T Consensus 361 ~~e~fp~~~r~t~~g~~~~ 379 (432)
T PRK10406 361 KAEMFPAQVRALGVGLSYA 379 (432)
T ss_pred HHHHCCCCccchhhhHHHH
Confidence 8999999999999998764
|
|
| >PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=268.25 Aligned_cols=341 Identities=23% Similarity=0.251 Sum_probs=257.8
Q ss_pred hHHHHHHHHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHH
Q 013044 48 SAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRREL 127 (451)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~ 127 (451)
++.|..+...++..+.++++....+...|.+.++ +|.++.+.|++.+++.++..+++++.|+++||+|||+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~ 83 (406)
T PRK11551 11 SRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQE-------FGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRIL 83 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhH
Confidence 3566676777788889999999999999999988 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhc
Q 013044 128 ILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLV 207 (451)
Q Consensus 128 ~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~ 207 (451)
..+.++.+++.+++++++|++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.+++.+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~ 163 (406)
T PRK11551 84 IVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAA 163 (406)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred ccccchhHHHhhhHHHHHH-HHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhh
Q 013044 208 DLVAGWRYMYGASTPLAVI-MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTEL 286 (451)
Q Consensus 208 ~~~~~wr~~f~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (451)
+.. +||+.|++.+++.++ ..+...++||+|++...+.+ .++
T Consensus 164 ~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---------~~~---------------------------- 205 (406)
T PRK11551 164 GDA-AWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGA---------GKQ---------------------------- 205 (406)
T ss_pred ccc-CHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCc---------chh----------------------------
Confidence 776 999999998877666 44445567888764211100 000
Q ss_pred cccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 013044 287 SYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVL 366 (451)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~ 366 (451)
++...+..++.+..++... .....+...........|.|.++++.|+ +..+.+.......++.++++++.|+
T Consensus 206 ------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~g~-s~~~~~~~~~~~~~~~~~~~~~~g~ 277 (406)
T PRK11551 206 ------RAPVLRALFGEGRATATLL-LWISYFFTLIVLYFLLNWLPSLLVGQGL-SRSQAGLVQIAFNIGGALGSLLIGA 277 (406)
T ss_pred ------hhhhHHHHhhhhhhhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCCC-ChhhhhHHHHHHHHHHHHHHHHHHH
Confidence 0000111111111111111 1111122222334556678888888888 8889999999999999999999999
Q ss_pred HhhhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhhee
Q 013044 367 VVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYC 446 (451)
Q Consensus 367 l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (451)
+.||++||+.+..+.....++...+.. .++.+...+..++.+.+.. +..+....+..|.+|++.|+++.++.
T Consensus 278 l~dr~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~p~~~~g~~~g~~ 349 (406)
T PRK11551 278 LMDRLRPRRVVLLIYAGILASLAALAA-----APSFAGMLLAGFAAGLFVV---GGQSVLYALAPLFYPTQVRGTGVGAA 349 (406)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHh-----cCcHHHHHHHHHHHHHHHH---hHHHHHHHHHHHHcchhhhhhhhhHH
Confidence 999999999887765555554443322 1233333333333333333 24566677888999999999999887
Q ss_pred eee
Q 013044 447 AKL 449 (451)
Q Consensus 447 ~~~ 449 (451)
+++
T Consensus 350 ~~~ 352 (406)
T PRK11551 350 VAV 352 (406)
T ss_pred HHh
Confidence 654
|
|
| >COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=254.36 Aligned_cols=354 Identities=16% Similarity=0.108 Sum_probs=263.3
Q ss_pred chHHHHHHHHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHH
Q 013044 47 VSAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRE 126 (451)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~ 126 (451)
.+.++-++..+.+++..+.+.+-.++.+.|.+.+| .++|.+|+|++.+++.++|.++.++.|.++||.+.|+.
T Consensus 24 ~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~-------~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~f 96 (448)
T COG2271 24 KRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIED-------GGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYF 96 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcee
Confidence 34456667788899999999999999999999998 78999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHh--h
Q 013044 127 LILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIG--S 204 (451)
Q Consensus 127 ~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~--~ 204 (451)
+.+++++.++.+++.+++++.+.+.+..+++|..+|..+|.+...+..|+++++||+..++++.+.++|..+.|++. +
T Consensus 97 m~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la 176 (448)
T COG2271 97 MAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLA 176 (448)
T ss_pred ehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999 8
Q ss_pred hhcccccchhHHHhhhHHHHHH-HHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHH
Q 013044 205 LLVDLVAGWRYMYGASTPLAVI-MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEIL 283 (451)
Q Consensus 205 ~l~~~~~~wr~~f~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (451)
++..+. +||..|++.++++++ .++.++..+|+|+..-.. ..||.. ++ +.+..
T Consensus 177 ~~~~~~-~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP----------~ie~~~-------~d------~~e~~--- 229 (448)
T COG2271 177 FFAFHG-GWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLP----------PIEEYR-------GD------PLEIY--- 229 (448)
T ss_pred HHHhcc-chhHHHHHHHHHHHHHHHHHHHHhCCCccccCCC----------CHHHhh-------cC------chhhh---
Confidence 888887 999999999999888 566667788888622100 001000 00 00000
Q ss_pred Hhhcccccccccch-----hhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHc-CCCCchhHHHHHHHHHHHH
Q 013044 284 TELSYVGEDKEVSL-----REVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSA-GFSAASDATRVSILLGLFK 357 (451)
Q Consensus 284 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~ 357 (451)
+++++.+..+. +-+++|+ .++..++.....+..-+.+..|.|.|+.+. |+ +..++....+.+-.++
T Consensus 230 ---~~~~~~~~ls~~~i~~~YVL~Nk----~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~-s~~~a~~a~~lfE~ag 301 (448)
T COG2271 230 ---EEEKENEGLTAWQIFVKYVLKNK----LIWLLALANVFVYVVRYGINDWGPLYLSEVKGF-SLVKANWAISLFEVAG 301 (448)
T ss_pred ---hhhccCCCccHHHHHHHHHHcCh----HHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCC-CHHHHHHHHHHHHHHh
Confidence 00011111223 3344443 344444444444445568889999998654 66 9999999999999999
Q ss_pred HHHHHHHHHHhhhc--CCchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchh
Q 013044 358 LIMTGLAVLVVERL--GRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFF 435 (451)
Q Consensus 358 ~~~~~~~g~l~d~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (451)
++|.++.|+++||+ |||....+.+.+.....++. ++......+.+.. .+++..++-+. +..-+.-....|+.|
T Consensus 302 l~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~---~w~~~~~~~~l~~-~~l~~iGf~Iy-GPqmLiGl~a~e~~p 376 (448)
T COG2271 302 LPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVL---YWLAPNGSYLLDA-ILLFIIGFLIY-GPQMLIGLAAAEFVP 376 (448)
T ss_pred hHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHH---HHcCCCccHHHHH-HHHHHHHHHHh-hHHHHHHHHHhcccc
Confidence 99999999999996 56665544333322222221 2222222233333 33333333330 223334466789999
Q ss_pred hhhhhhhhheee
Q 013044 436 EMTRIVCSIYCA 447 (451)
Q Consensus 436 ~~~~~~~~~~~~ 447 (451)
++.-|++.|+..
T Consensus 377 K~AaGtA~Gf~G 388 (448)
T COG2271 377 KKAAGTATGFVG 388 (448)
T ss_pred Hhhccchhchhh
Confidence 999999988754
|
|
| >TIGR00898 2A0119 cation transport protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=274.50 Aligned_cols=342 Identities=21% Similarity=0.273 Sum_probs=251.5
Q ss_pred cccccccCCCCCCcccccCC---chhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHH
Q 013044 73 CATISIESPTLSGISWYDLS---SVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFII 149 (451)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~s---~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~ 149 (451)
+..|.+.+| ++++ +.+.+++.+++.++..+++++.|+++||+|||++++++.++.+++.+++++++|++.
T Consensus 110 ~~~~~i~~e-------~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~ 182 (505)
T TIGR00898 110 TFSSTIVTE-------WDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTV 182 (505)
T ss_pred cccccEEEE-------ecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHH
Confidence 456777777 8998 999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHH
Q 013044 150 MVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGM 229 (451)
Q Consensus 150 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~ 229 (451)
++++|++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++.+. +||+.|++.+++.++..+
T Consensus 183 ~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~----~wr~~~~~~~i~~~~~~~ 258 (505)
T TIGR00898 183 FLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP----DWRWLQLAVSLPTFLFFL 258 (505)
T ss_pred HHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh----HHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999987663 599999999998888766
Q ss_pred HhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhcccchhHH
Q 013044 230 GMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKAL 309 (451)
Q Consensus 230 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (451)
..+++||+|+|+..++ +.+++.+.+++..+.+........... ..+.+..++.++...+++++++..+..
T Consensus 259 ~~~~~~esp~~l~~~~---------~~~~a~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~ 328 (505)
T TIGR00898 259 LSWFVPESPRWLISQG---------RIEEALKILQRIAKINGKKLPAEVLSL-SLEKDLSSSKKQYSFLDLFRTPNLRKT 328 (505)
T ss_pred HHHhcCCChHHHHHCC---------CHHHHHHHHHHHHHHcCCCCCHHHHhh-hhhhhhhhccCCCcHHHHhCChHHHHH
Confidence 7788999999987766 556666666555433322211111111 101111111223567888888776666
Q ss_pred HHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHH
Q 013044 310 IIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLF 389 (451)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 389 (451)
.+.....++.....+ +..+.+....+. + ........++..+++.++.+++.||+|||+.+..+.++.+++.+
T Consensus 329 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~---~~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l 400 (505)
T TIGR00898 329 TLCLMMLWFTTAFSY----YGLVLDLGNLGG-N---IYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALL 400 (505)
T ss_pred HHHHHHHHHHHHHHH----HHHhccccccCC-C---hHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 655544444322211 122222333444 2 34455566788889999999999999999999888887777766
Q ss_pred HHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheeeee
Q 013044 390 LLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCAKL 449 (451)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (451)
++... .....+...+..++..++.+. ..+..+.+..|.+|++.|+++.++++++
T Consensus 401 ~~~~~---~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~e~~p~~~r~~~~g~~~~~ 454 (505)
T TIGR00898 401 LLLFV---PVDLYFLRTALAVLGKFGITS---AFQMVYLYTAELYPTVVRNLGVGVCSTM 454 (505)
T ss_pred HHHHc---CCCchHHHHHHHHHHHHHHHH---HHHHHHHHhcccccHHHHhhhHhHHHHH
Confidence 55432 112223333333333333333 4566678889999999999998887654
|
|
| >PRK12307 putative sialic acid transporter; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=262.87 Aligned_cols=344 Identities=15% Similarity=0.157 Sum_probs=251.2
Q ss_pred HHHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHH
Q 013044 54 FLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALL 133 (451)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l 133 (451)
+....++.+.++++.....+.+|.+.++ +|+++.+.+++.+++.++..+++++.|+++||+|||+++.++.++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~-------~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~ 92 (426)
T PRK12307 20 LFSAWLGYVFDGFDFMLIFYIMYLIKAD-------LGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVA 92 (426)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 4566677788889999999999999888 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccch
Q 013044 134 YLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGW 213 (451)
Q Consensus 134 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~w 213 (451)
.+++.++++++++++.++++|+++|++.+...+....++.|++|+++|+++.++...+..+|.++++.+.+.+.+.. +|
T Consensus 93 ~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~-~w 171 (426)
T PRK12307 93 YSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAY-GW 171 (426)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccC-CH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888877 99
Q ss_pred hHHHhhhHHHHHHHHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhccccccc
Q 013044 214 RYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDK 293 (451)
Q Consensus 214 r~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (451)
|+.|++..+..++........||++++...+.+ ....... . ..+..
T Consensus 172 ~~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~---------------------~~~~~~~--~-----------~~~~~ 217 (426)
T PRK12307 172 RAAFFVGLLPVLLVIYIRARAPESKEWEEAKLS---------------------GKGKHSQ--S-----------AWSVF 217 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCChHHHHhhhh---------------------ccccccc--c-----------chhhh
Confidence 999998654443333333334665443211100 0000000 0 00001
Q ss_pred ccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 013044 294 EVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGR 373 (451)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~ 373 (451)
+..++++++++..+.........+. .+.....+..+.|.++++.|+ +....+.......++.+++.++.+++.||++|
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~ 295 (426)
T PRK12307 218 SLSMKGLFNRAQFPLTLCVFIVLFS-IFGANWPIFGLLPTYLAGEGF-DTGVVSNLMTAAAFGTVLGNIVWGLCADRIGL 295 (426)
T ss_pred hHHHHHHHhhchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 1245667776555444433322222 222233455678888888888 88888888899999999999999999999999
Q ss_pred chhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhh-ccccCCCceeeeeeecchhhhhhhhhhheeee
Q 013044 374 RPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCY-QVIKNFNPSKIYHFRIFFFEMTRIVCSIYCAK 448 (451)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (451)
|+.+..+.++..+..+.+... ....... ...++++.++ .. +..+....++.|.+|++.|+++.|+...
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~p~~~~g~~~g~~~~ 364 (426)
T PRK12307 296 KKTFSIGLLMSFLFIFPLFRI----PQDNYLL-LGACLFGLMATNV--GVGGLVPKFLYDYFPLEVRGLGTGLIYN 364 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHH----ccccHHH-HHHHHHHHHHhcc--cHhHHHHHHHHHhCcHHHHhhhhhHHHH
Confidence 998887776655544333221 1122221 2222222222 22 2334445667899999999999987644
|
|
| >PRK03545 putative arabinose transporter; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-33 Score=259.94 Aligned_cols=321 Identities=18% Similarity=0.188 Sum_probs=232.7
Q ss_pred HHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHH
Q 013044 58 ALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVG 137 (451)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~ 137 (451)
.++.+..........+.+|.+.++ +|.++.+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~l~~~-------~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 87 (390)
T PRK03545 15 ALAAFIFNTTEFVPVGLLSDIAQS-------FHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIAS 87 (390)
T ss_pred HHHHHHHHhHHHHHHcchHHHHhH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHH
Confidence 333344434444556678899888 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHH
Q 013044 138 ALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMY 217 (451)
Q Consensus 138 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f 217 (451)
++++++++|++.++++|+++|++.+...+...+++.|++|+++|++++++...+.++|.+++|++++.+.+.. |||+.|
T Consensus 88 ~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~-gw~~~f 166 (390)
T PRK03545 88 HVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYL-GWRTTF 166 (390)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHh-cHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998887 999999
Q ss_pred hhhHHHHHHHH-HHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccc
Q 013044 218 GASTPLAVIMG-MGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVS 296 (451)
Q Consensus 218 ~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (451)
++.++++++.. .....+||+|+. + ++...+
T Consensus 167 ~~~~~~~~l~~~~~~~~~~~~~~~----~---------------------------------------------~~~~~~ 197 (390)
T PRK03545 167 LAIGGGALITLLLLIKLLPLLPSE----H---------------------------------------------SGSLKS 197 (390)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCC----C---------------------------------------------cchHHH
Confidence 99998877743 334445654320 0 000012
Q ss_pred hhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHH-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCch
Q 013044 297 LREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRP 375 (451)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~ 375 (451)
.++.++++..+.......+.... ......+.+.++++ .|+ +..+++.......++.++++++.+++.||+++|.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~g~-s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~ 272 (390)
T PRK03545 198 LPLLFRRPALVSLYLLTVVVVTA----HFTAYSYIEPFVQQVAGL-SENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGF 272 (390)
T ss_pred HHHHHhCcHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHhcCC-CccHHHHHHHHHHHHHHHHHHHHHHHhhccchhH
Confidence 34566665444333322222221 12233455555554 577 8888999999999999999999999999999876
Q ss_pred hhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheeeee
Q 013044 376 LLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCAKL 449 (451)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (451)
.. .+..+..++...+... .++.+...+..++++.+... ..+.......+..| +.|+.+.++.+++
T Consensus 273 ~~-~~~~~~~~~~~~l~~~----~~~~~~~~~~~~l~g~~~~~---~~~~~~~~~~~~~~-~~~~~~~g~~~~~ 337 (390)
T PRK03545 273 LL-IAIALLLVCLLLLLPA----ANSEWHLSVLSIFWGIAIMC---IGLAMQVKVLKLAP-DATDVAMALFSGI 337 (390)
T ss_pred HH-HHHHHHHHHHHHHHHH----hchHHHHHHHHHHHHHHHhc---chHHHHHHHHHhCC-CcHHHHHHHHHHH
Confidence 54 3333333333322211 23334444444455554433 34444455566666 4678877765543
|
|
| >TIGR00891 2A0112 putative sialic acid transporter | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=259.07 Aligned_cols=359 Identities=18% Similarity=0.210 Sum_probs=250.8
Q ss_pred HHHHHHHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHH
Q 013044 50 AILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELIL 129 (451)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~ 129 (451)
.|..+....++.+.++++....++..|.+.++ +|+++.+.+++.+++.++..+++++.|.++||+|||+++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~ 82 (405)
T TIGR00891 10 QWNAFSAAWLGWLLDAFDFFLVALVLAEVAGE-------FGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVT 82 (405)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 44555677788899999999999999999888 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhccc
Q 013044 130 AALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL 209 (451)
Q Consensus 130 ~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~ 209 (451)
+.++.+++.++++++++++.++++|++.|++.+...+...+++.|++|+++|+++.++.+.+..+|.++++.+++.+.+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~ 162 (405)
T TIGR00891 83 SIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPV 162 (405)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred cc-chhHHHhhhHHHHHHHHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcc
Q 013044 210 VA-GWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSY 288 (451)
Q Consensus 210 ~~-~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (451)
.. +||+.|++.++..++.++....+||++++...+++ .++..+..++..+... ..+..
T Consensus 163 ~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~------~~~~~------ 221 (405)
T TIGR00891 163 WGDGWRALFFISILPIIFALWLRKNIPEAEDWKEKHAG---------KALVRTMVDILYGGEH------RIANI------ 221 (405)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhh---------hhhhhhHHHHHhccch------hhhhh------
Confidence 51 49999998777666665666677887754322110 0011111111110000 00000
Q ss_pred cccccccchhhhhcccchhHHHH-HHHHHHHHHhhchhHHHHhHHHHH-HHcCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 013044 289 VGEDKEVSLREVFHGKCLKALII-GAGLVLFQQITGQPSVLYYAASIL-QSAGFSAASDATRVSILLGLFKLIMTGLAVL 366 (451)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~ 366 (451)
.++.....++..+ ..+..+. ......+.... ......+.|.++ ++.|+ +..+.+.......++.+++.++.++
T Consensus 222 -~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~-s~~~~~~~~~~~~~~~~~g~~~~g~ 296 (405)
T TIGR00891 222 -VMTLAAAMVQSAG--KRWPTFVYLVVLVLFANLY-SHPIQDLLPTYLKADLGL-SPHTVANIVVFSNIGAIVGGCVFGF 296 (405)
T ss_pred -hhhhhHHhhhhhh--hhhHHHHHHHHHHHHHHHH-HhhhhhhhHHHHHHHhCC-CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000111111 1111111 11111221111 223344556555 45688 8889999999999999999999999
Q ss_pred HhhhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhhee
Q 013044 367 VVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYC 446 (451)
Q Consensus 367 l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (451)
+.||++||+.+..+.....+....... . ..+.+...+..++.+.+.. +..+....+..|.+|++.|+++.|+.
T Consensus 297 l~dr~g~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~ 369 (405)
T TIGR00891 297 LGDWLGRRKAYVCSLLAGQLLIIPVFA--I--GANVAVLGLGLFFQQMLVQ---GIWGILPKHLGEYFPTDQRAAGLGFT 369 (405)
T ss_pred HHHHhCchhhhHHHHHHHHHHHHHHHH--h--CCchHHHHHHHHHHHHHHc---cchhhHHHHHhhhCCcchhHHHhhHH
Confidence 999999999887766554332222111 1 2233333333233333333 24455567788999999999999876
Q ss_pred ee
Q 013044 447 AK 448 (451)
Q Consensus 447 ~~ 448 (451)
+.
T Consensus 370 ~~ 371 (405)
T TIGR00891 370 YQ 371 (405)
T ss_pred HH
Confidence 54
|
|
| >PRK09556 uhpT sugar phosphate antiporter; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=270.38 Aligned_cols=358 Identities=15% Similarity=0.042 Sum_probs=245.6
Q ss_pred hHHHHHHHHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHH
Q 013044 48 SAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRREL 127 (451)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~ 127 (451)
+..+.++..+.++++....++..+++..|.+.+| +|++..+.|++.+++.+++.+++++.|+++||+|||+++
T Consensus 25 ~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~-------~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l 97 (467)
T PRK09556 25 KPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMIST-------YGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFL 97 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchH
Confidence 3355566777788888888999999999999998 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH-----hhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHH
Q 013044 128 ILAALLYLVGALVTAL-----APDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGI 202 (451)
Q Consensus 128 ~~~~~l~~~~~~~~~~-----~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l 202 (451)
.++.++++++.++.++ ++|++.++++|+++|++.+...+...++++|++|+++||+++++...+.++|.++++++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i 177 (467)
T PRK09556 98 PFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGV 177 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHH
Confidence 9988888877776665 58999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcccc--cchhHHHhhhHHHHHHH-HHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhH
Q 013044 203 GSLLVDLV--AGWRYMYGASTPLAVIM-GMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEV 279 (451)
Q Consensus 203 ~~~l~~~~--~~wr~~f~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (451)
+.++.+.. .+||..|.+.++++++. ++.+++.+++|+....+. .++ . ..+....
T Consensus 178 ~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~----------~~~---~---~~~~~~~------- 234 (467)
T PRK09556 178 ALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGK----------AEE---I---FGEPISE------- 234 (467)
T ss_pred HHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCC----------hhh---c---ccCccch-------
Confidence 87765531 26999999888887774 444445576664210000 000 0 0000000
Q ss_pred HHHHHhhccccccc-ccc-hhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHH-HcCCCCchhHHHHHHHHHHH
Q 013044 280 DEILTELSYVGEDK-EVS-LREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQ-SAGFSAASDATRVSILLGLF 356 (451)
Q Consensus 280 ~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~ 356 (451)
++ +. .+.++.. ... .+..++++..+.. .+..+.....+.....|.|.|++ ..|+ +..+++.......++
T Consensus 235 ~~--~~-~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~p~yl~~~~g~-s~~~a~~~~~~~~~~ 306 (467)
T PRK09556 235 ED--KE-TESTDMTKWQIFVEYVLKNPVIWLL----CFANIFLYIVRIGIDNWSPVYAFQELGF-SKEDAINTFTLFEIG 306 (467)
T ss_pred hh--hc-cccccCcHHHHHHHHHHcChHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHccCC-CHHHHHHHHHHHHHH
Confidence 00 00 0000000 000 1124454333322 22223333334456778888875 4788 888999999999999
Q ss_pred HHHHHHHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhh
Q 013044 357 KLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFE 436 (451)
Q Consensus 357 ~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (451)
.+++.++.|+++||++||+.+........++...+.. ....+.+...+..++++.+. . +..........|.+|+
T Consensus 307 ~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~G~~~-~--~~~~~~~~~~~~~~p~ 380 (467)
T PRK09556 307 ALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVY---QHATSEYMYLASLFALGFLV-F--GPQLLIGVAAVGFVPK 380 (467)
T ss_pred HHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHH---HhcCcHHHHHHHHHHHHHHH-h--hHHHHHHHHHHhhcch
Confidence 9999999999999999988765544333332222111 11223333323333333221 1 1121222455689999
Q ss_pred hhhhhhhheeeee
Q 013044 437 MTRIVCSIYCAKL 449 (451)
Q Consensus 437 ~~~~~~~~~~~~~ 449 (451)
+.++++.|+.++.
T Consensus 381 ~~~g~a~gi~~~~ 393 (467)
T PRK09556 381 KAIGVANGIKGTF 393 (467)
T ss_pred hhHHHHHHHHHHH
Confidence 9999999987654
|
|
| >PRK11663 regulatory protein UhpC; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-32 Score=260.43 Aligned_cols=346 Identities=13% Similarity=0.061 Sum_probs=238.0
Q ss_pred HHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHH
Q 013044 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (451)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~ 134 (451)
....++.+...++...++..+|.+.++ +|++..+.|++.+++.+++.+++++.|+++||+|||+++.++.++.
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~ 98 (434)
T PRK11663 26 ITMYLGYALFYFTRKSFNAAMPEMLAD-------LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIAT 98 (434)
T ss_pred HHHHHHHHHHHHhhhhHHHhhHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHH
Confidence 445566677777777788889999888 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchh
Q 013044 135 LVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWR 214 (451)
Q Consensus 135 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr 214 (451)
+++.+++++++|++.+++.|++.|++.|...+...+++.|++|+++|++++++.+.+.++|..+++.+++.+.+.. +||
T Consensus 99 ~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~-gw~ 177 (434)
T PRK11663 99 GIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHY-GWR 177 (434)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-cHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998887 999
Q ss_pred HHHhhhHHHHHH-HHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhccccccc
Q 013044 215 YMYGASTPLAVI-MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDK 293 (451)
Q Consensus 215 ~~f~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (451)
+.|++.+++.++ .++..++++|+|++...+. ..+. .+++.+. .++ .+.+
T Consensus 178 ~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~---~~~~---~~~~~~~--------------------~~~----~~~~ 227 (434)
T PRK11663 178 YGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPS---VGEW---RHDALEL--------------------AQQ----QEGA 227 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCC---cccc---ccccccc--------------------chh----cccc
Confidence 999998887665 4445556788775321000 0000 0000000 000 0000
Q ss_pred ccchhh-----hhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHH-HcCCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 013044 294 EVSLRE-----VFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQ-SAGFSAASDATRVSILLGLFKLIMTGLAVLV 367 (451)
Q Consensus 294 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l 367 (451)
+.++++ .++++..+.... ..+........+..|.|.+++ +.|+ +..+++.......++.++++++.|++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~p~~l~~~~g~-s~~~a~~~~~~~~~~~~~g~~~~g~l 302 (434)
T PRK11663 228 GLSRKEILTKYVLLNPYIWLLSF----SYVLVYVVRAAINDWGNLYMSETLGV-DLVTANSAVSMFELGGFIGALVAGWG 302 (434)
T ss_pred CCChhhhHHHHHhcChHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhccCC-CHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 111222 333332222222 222222233456678888874 5688 88899999999999999999999999
Q ss_pred hhhc--CCchhh-hchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhh
Q 013044 368 VERL--GRRPLL-LGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSI 444 (451)
Q Consensus 368 ~d~~--g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (451)
.||+ ++|+.. ........+....+... ...+........+.++ .+.. +..........|.+|++.|+++.+
T Consensus 303 ~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g-~~~~--~~~~~~~~~~~~~~~~~~~g~~~g 376 (434)
T PRK11663 303 SDKLFNGNRGPMNLIFAAGILLSVGSLWLM---PFASYVMQAACFFTIG-FFVF--GPQMLIGMAAAECSHKEAAGAATG 376 (434)
T ss_pred HHHhccCCccHHHHHHHHHHHHHHHHHHHc---ccccHHHHHHHHHHHH-HHHh--hHHHHHHHHHHhcccHhhHHhHHH
Confidence 9998 333332 22112222221111111 1122222222222221 1111 112223345678899999999999
Q ss_pred eeeee
Q 013044 445 YCAKL 449 (451)
Q Consensus 445 ~~~~~ 449 (451)
+.++.
T Consensus 377 ~~~~~ 381 (434)
T PRK11663 377 FVGLF 381 (434)
T ss_pred HHHHH
Confidence 87654
|
|
| >PRK09952 shikimate transporter; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-31 Score=254.74 Aligned_cols=339 Identities=16% Similarity=0.144 Sum_probs=228.8
Q ss_pred HHHHHHHHhhhhhcccccccccccccc-cCCCCCCcccc-cCCchhHHHHH-----HHHHHHHHHHHHHHhhhhhhhcch
Q 013044 52 LPFLFPALGGLLYGYDIGSTSCATISI-ESPTLSGISWY-DLSSVEIGLIT-----SGSLYGALIGSILAFNIADILGRR 124 (451)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~s~~~~g~~~-----s~~~~~~~~~~~~~g~l~dr~Grr 124 (451)
..+....++.+.+++|...++...|.+ .++. + +.++. .+++. ++.+++..+++++.|+++||+|||
T Consensus 22 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr 94 (438)
T PRK09952 22 RAALGSFAGAVVDWYDFLLYGITAALVFNREF------FPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRK 94 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------CCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccH
Confidence 345666778889999999888777643 3330 1 44544 45543 355677889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHH--------HHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHH
Q 013044 125 RELILAALLYLVGALVTALAPDFI--------IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGM 196 (451)
Q Consensus 125 ~~~~~~~~l~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~ 196 (451)
++++++.++++++++++++++|+. .++++|+++|++.|+..+...+++.|++|+++|++..+..+.+..+|.
T Consensus 95 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~ 174 (438)
T PRK09952 95 RMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGL 174 (438)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence 999999999999999999999987 588999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhcc--------cccchhHHHhhhHHHHHHHHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhC
Q 013044 197 VGGYGIGSLLVD--------LVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRG 268 (451)
Q Consensus 197 ~~g~~l~~~l~~--------~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (451)
.++..+...+.. .. +||++|++.+++.++........||+|++..++++++
T Consensus 175 ~l~~~~~~~l~~~~~~~~~~~~-gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~-------------------- 233 (438)
T PRK09952 175 LLSTGLVSLISMMTTDEQFLSW-GWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQA-------------------- 233 (438)
T ss_pred HHHHHHHHHHHHhCCHHHhhcc-ChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhcc--------------------
Confidence 998877766542 34 9999999988876655555556788877543221000
Q ss_pred CCCCCCCchhHHHHHHhhcccccccccchh-hhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHH-HcCCCCchhH
Q 013044 269 QSIGDSAPTEVDEILTELSYVGEDKEVSLR-EVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQ-SAGFSAASDA 346 (451)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~ 346 (451)
+.+++.+.. .+++++..+ .......+......+....|.|.+++ ..|+ +....
T Consensus 234 ---------------------~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~-s~~~~ 288 (438)
T PRK09952 234 ---------------------AAKKRIPVIEALLRHPGAF---LKIIALRLCELLTMYIVTAFALNYSTQNLGL-PRELF 288 (438)
T ss_pred ---------------------cccccCCHHHHHHHchHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CHHHH
Confidence 000011111 233332211 11111122222233445567777764 4677 55555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCcee
Q 013044 347 TRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSK 426 (451)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (451)
.......++..+++.++.|+++||+|||+.+..+.++..++...+..... ..+..+..+...++.+.+.+. ..+..
T Consensus 289 ~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~---~~~~~ 364 (438)
T PRK09952 289 LNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALE-AQSIFWIVFFSIMLANIAHDM---VVCVQ 364 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH-cCChHHHHHHHHHHHHHHHHH---HHHHH
Confidence 55556667778888999999999999999887766554443332221111 112222223333333344443 34455
Q ss_pred eeeeecchhhhhhhhhhheee
Q 013044 427 IYHFRIFFFEMTRIVCSIYCA 447 (451)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~ 447 (451)
+.+..|.+|++.|+++.+++.
T Consensus 365 ~~~~~e~~p~~~r~tg~g~~~ 385 (438)
T PRK09952 365 QPMFTEMFGASYRYSGAGVGY 385 (438)
T ss_pred HHHHHHHCCcchhHHHHhHHH
Confidence 678899999999988877653
|
|
| >TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-32 Score=264.56 Aligned_cols=375 Identities=16% Similarity=0.190 Sum_probs=264.7
Q ss_pred HHHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHH
Q 013044 54 FLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALL 133 (451)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l 133 (451)
+..++++.++..++....++.+|.+.++ +|.+..+.+++.+.+.++..++.++.|+++||+|||++++++.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~-------~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 76 (485)
T TIGR00711 4 TIVLMLGTFMAVLDSTIVNVAIPTIAGD-------LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFA 76 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHH
Confidence 4566677788888999999999999998 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccch
Q 013044 134 YLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGW 213 (451)
Q Consensus 134 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~w 213 (451)
.+++.+++++++|++.++++|+++|++.+...+...+++.|++|+++|+++.++......+|..+||.+++++.++. +|
T Consensus 77 ~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~w 155 (485)
T TIGR00711 77 FTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENY-HW 155 (485)
T ss_pred HHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCc-Cc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887 99
Q ss_pred hHHHhhhHHHHHHH-HHHhhcccCchHHHHHhhccccCCccchHHHHHHH--HHH--HhCCCCCCCCchhHHHHH-----
Q 013044 214 RYMYGASTPLAVIM-GMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISC--LCR--LRGQSIGDSAPTEVDEIL----- 283 (451)
Q Consensus 214 r~~f~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~----- 283 (451)
|+.|++.++++++. ++..+++||+++ .++++.|..+..-..... ... .++...+...........
T Consensus 156 ~~~f~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (485)
T TIGR00711 156 RWIFLINVPIGIIVVVVAFFILPRDKP-----AASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLV 230 (485)
T ss_pred eehhhhhhHHHHHHHHHHHHHcCCccc-----cccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHH
Confidence 99999988887764 344445666432 111112211111111110 000 111111111111110000
Q ss_pred ----HhhcccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHH-cCCCCchhHHHHHHHHHHHHH
Q 013044 284 ----TELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKL 358 (451)
Q Consensus 284 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~ 358 (451)
....+.+++++....++++++......+...+..+ ......++.|.++++ .|+ ++.+++....+..++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~p~~~~~~~g~-s~~~~g~~~~~~~~~~~ 305 (485)
T TIGR00711 231 AIIAFVVWELTDDNPLVDLRLFKYRNFTIGCVYMSLLGL----GLYGSFYLLPLYLQQVLGY-TALQAGLHILPVGLAPM 305 (485)
T ss_pred HHHHHHHHHHcCCCCccCHHHHcCCChHHHHHHHHHHHH----HHHHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHHH
Confidence 00000111122222356666554444333333222 233455677888765 577 88999999999999999
Q ss_pred HHHHHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhh
Q 013044 359 IMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMT 438 (451)
Q Consensus 359 ~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (451)
++.++.|++.||++||+.+..+..+..++..++.... ......+......++.+.+.+. ...+. .....+..|++.
T Consensus 306 ~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~g~g~~~--~~~~~-~~~~~~~~~~~~ 381 (485)
T TIGR00711 306 LSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTF-TPDTPFLAIALPQFIRGFGMGC--FFMPL-TTIALSGLPPHK 381 (485)
T ss_pred HHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHH--HHHHH-HHHHHhcCCHHH
Confidence 9999999999999999998888877777666554211 1122233334444455555554 23333 334445578899
Q ss_pred hhhhhheeeeec
Q 013044 439 RIVCSIYCAKLR 450 (451)
Q Consensus 439 ~~~~~~~~~~~~ 450 (451)
++.+.++.+..|
T Consensus 382 ~g~~~~~~~~~~ 393 (485)
T TIGR00711 382 IARGSSLSNFTR 393 (485)
T ss_pred HhHHHHHHHHHH
Confidence 999998877654
|
This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. |
| >PRK15075 citrate-proton symporter; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-32 Score=256.88 Aligned_cols=334 Identities=17% Similarity=0.217 Sum_probs=227.9
Q ss_pred HHHHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHH-HHH-----HHHHHHHHHHHhhhhhhhcchHH
Q 013044 53 PFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLIT-SGS-----LYGALIGSILAFNIADILGRRRE 126 (451)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~-s~~-----~~~~~~~~~~~g~l~dr~Grr~~ 126 (451)
.....+++.+++.+|...++...|.+.++ ++.++.+.+.+. +.. .++..+++++.|+++||+|||++
T Consensus 16 ~~~~~~~~~~~~~~d~~~~~~~~~~i~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~ 88 (434)
T PRK15075 16 AILRVTSGNFLEMFDFFLFGFYATAIAKT-------FFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKG 88 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHH
Confidence 45777889999999999999999999988 888877765443 322 23335789999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhHH--------HHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHH
Q 013044 127 LILAALLYLVGALVTALAPDFI--------IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVG 198 (451)
Q Consensus 127 ~~~~~~l~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 198 (451)
++.+.+++++++++++++++++ .++++|+++|++.+...+....+++|++|+++|++++++...+..+|..+
T Consensus 89 l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~ 168 (434)
T PRK15075 89 LIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVF 168 (434)
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHH
Confidence 9999999999999999999987 46899999999999999999999999999999999999999988888888
Q ss_pred HHHHhhhhc--------ccccchhHHHhhhHHHHHHHHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCC
Q 013044 199 GYGIGSLLV--------DLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQS 270 (451)
Q Consensus 199 g~~l~~~l~--------~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (451)
++.+++.+. +.. |||++|++..+...+........||++++..+++
T Consensus 169 g~~~g~~l~~~~~~~~~~~~-gWr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~------------------------- 222 (434)
T PRK15075 169 AALLGYLLNQWLSPAQMAEW-GWRIPFLIGCLIVPFIFLIRRSLEETEEFLARKH------------------------- 222 (434)
T ss_pred HHHHHHHHHHhCCHHHHhcc-chHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhh-------------------------
Confidence 888877653 344 9999999765443222222222333322110000
Q ss_pred CCCCCchhHHHHHHhhcccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHH-cCCCCchhHHHH
Q 013044 271 IGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRV 349 (451)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~ 349 (451)
+.+.+..++...++ ++.........+.....++....|.|.++++ .|+ +..+.+..
T Consensus 223 -------------------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~-~~~~~~~~ 279 (434)
T PRK15075 223 -------------------RPSMREIFRSLAAN---WRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHL-SAADSLLV 279 (434)
T ss_pred -------------------ccccccHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CHHHHHHH
Confidence 00001111222221 1222222222222334455677889998876 688 77888888
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeee
Q 013044 350 SILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYH 429 (451)
Q Consensus 350 ~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (451)
..+..++.+++.++.|+++||+|||+.+..+..+..+...... .................+.+.+++. ..+....+
T Consensus 280 ~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~ 355 (434)
T PRK15075 280 TLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPAL-SWLVAAPSFARMLAVELWLSFLYGS---YNGAMVVA 355 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH-HHHHcCCchHHHHHHHHHHHHHHHH---HHhhHHHH
Confidence 8899999999999999999999999987765444332211111 1111112221222222222333333 33444567
Q ss_pred eecchhhhhhhhhhhee
Q 013044 430 FRIFFFEMTRIVCSIYC 446 (451)
Q Consensus 430 ~~~~~~~~~~~~~~~~~ 446 (451)
..|.+|++.|+++.++.
T Consensus 356 ~~e~~p~~~rg~~~g~~ 372 (434)
T PRK15075 356 LTEVMPAEVRTAGFSLA 372 (434)
T ss_pred HHHHCCCCccchheeHH
Confidence 78999999999988764
|
|
| >TIGR00895 2A0115 benzoate transport | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-32 Score=254.86 Aligned_cols=366 Identities=20% Similarity=0.271 Sum_probs=258.0
Q ss_pred HHHHHHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHH
Q 013044 51 ILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILA 130 (451)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~ 130 (451)
+..+....+..+..+++........|.+.++ +|.++.+.+++.+.+.++..++.++.|+++||+|||+++..+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~ 88 (398)
T TIGR00895 16 WRAIILSFLIMLMDGYDLAAMGFAAPAISAE-------WGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWS 88 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHhhc-------cCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHH
Confidence 3334445556667777777788889998888 899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccc
Q 013044 131 ALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV 210 (451)
Q Consensus 131 ~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~ 210 (451)
.++.+++.++..+.++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++.+++.+.+..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 168 (398)
T TIGR00895 89 ILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVF 168 (398)
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998887
Q ss_pred cchhHHHhhhHHHHHH-HHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhccc
Q 013044 211 AGWRYMYGASTPLAVI-MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYV 289 (451)
Q Consensus 211 ~~wr~~f~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (451)
+||+.|++.+++.++ ..+..+++||++++...++ .++..+..++.......+... +.. ++ +..
T Consensus 169 -g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~-~~~---~~-~~~ 232 (398)
T TIGR00895 169 -GWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKR----------PETVRRIVNAIAPQMQAEAQS-ALP---EQ-KAT 232 (398)
T ss_pred -cceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcC----------HHHHHHHHHHHHHhccccccc-ccc---cc-ccc
Confidence 999999998766555 5555667888876543221 111111111111111000000 000 00 000
Q ss_pred ccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 013044 290 GEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVE 369 (451)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d 369 (451)
.+..+...+.+++.+..+....... ..+...........|.|++.++.++ +..+.+.......++.+++.++.+++.|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 310 (398)
T TIGR00895 233 QGTKRSVFKALFQGKTARITVLLWL-LYFMLLVGVYFLTNWLPKLMVELGF-SLSLAATGGALFNFGGVIGSIIFGWLAD 310 (398)
T ss_pred cchhhHHHHHHhcchhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0111111222333332233222222 2223333445666778888888888 8888999999999999999999999999
Q ss_pred hcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheeeee
Q 013044 370 RLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCAKL 449 (451)
Q Consensus 370 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (451)
|+++|+.... ..+..+...++... ..+.+...+..++.+.+.+. ..+....+..+.+|++.|+++.++..++
T Consensus 311 ~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 382 (398)
T TIGR00895 311 RLGPRVTALL-LLLGAVFAVLVGST----LFSPTLLLLLGAIAGFFVNG---GQSGLYALMALFYPTAIRATGVGWAIGI 382 (398)
T ss_pred hcchHHHHHH-HHHHHHHHHHHHHH----hhCHHHHHHHHHHHHHHHHH---HHHHHHHHHhhcCCHHHHHHHHHHHHHH
Confidence 9999844433 33333332222211 13344445555555565554 4566678889999999999998876543
|
|
| >TIGR00903 2A0129 major facilitator 4 family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-32 Score=251.26 Aligned_cols=311 Identities=15% Similarity=0.026 Sum_probs=215.9
Q ss_pred ccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHH
Q 013044 70 STSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFII 149 (451)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~ 149 (451)
.+++.+|.+.+| +|+|+.+.|++.+++.+++.+++++.|+++||+|||+++..+......+.+.....+|++.
T Consensus 9 ~~~~~lp~i~~~-------~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (368)
T TIGR00903 9 TFSPVLSLVAED-------IDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEW 81 (368)
T ss_pred HHHhhHHHHHHH-------hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 457788999888 9999999999999999999999999999999999999877665555554443344479999
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHH-HH
Q 013044 150 MVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI-MG 228 (451)
Q Consensus 150 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~-~~ 228 (451)
++++|+++|++.+. .+.....++|++|+++|++++++.+.+.++|.+++++++.++.+.. |||+.|++.++++++ .+
T Consensus 82 l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~-gWr~~f~~~~~l~~~~~~ 159 (368)
T TIGR00903 82 LLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAG-GLQLLIIPIAAVAAAGII 159 (368)
T ss_pred HHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-chHHHHHHHHHHHHHHHH
Confidence 99999999999985 5566667799999999999999999999999999999999999887 999999998888777 55
Q ss_pred HHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhcccchhH
Q 013044 229 MGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKA 308 (451)
Q Consensus 229 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (451)
+.++++||+|++. + +.. + .++ ...+++++++++..+.
T Consensus 160 ~~~~~lp~~p~~~---~-----~~~---~---------------------~~~-----------~~~~~~~ll~~~~~~~ 196 (368)
T TIGR00903 160 LVLAALPALPFQA---A-----EGF---G---------------------FKD-----------AVKEFGALAGRKDLWI 196 (368)
T ss_pred HHHHHcCCCCCCC---C-----CCc---c---------------------hHH-----------HHHHHHHHHcChhHHH
Confidence 5666789887521 0 000 0 000 0012556777654443
Q ss_pred HHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCc---hhhhc-hhHHH
Q 013044 309 LIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRR---PLLLG-GVSGI 384 (451)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~---~~~~~-~~~~~ 384 (451)
..+. .+.....++.+..|.|.++++.|+ +.. .+.......+.+.++ .+++.||..|| +.... .....
T Consensus 197 ~~~~----~~~~~~~~~~~~~wlp~~L~~~g~-s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~ 267 (368)
T TIGR00903 197 IGAI----LGFGVALFDNLAIWLEAALRPAGL-EDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLI 267 (368)
T ss_pred HHHH----HHHHHHHHHHHHHHHHHHHHHCCC-ChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHH
Confidence 3332 333344455777899999988887 554 555555555555544 46777777543 33222 22222
Q ss_pred HHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheeeee
Q 013044 385 VISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCAKL 449 (451)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (451)
++....++. ..+.+..+....+.+.+.. ...+..+.+..|.+|++.|+++.|+.+++
T Consensus 268 a~~~~~~~~-----~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~p~~~rgt~~G~~~~~ 324 (368)
T TIGR00903 268 AAFFLALAF-----ELNRLALFAFIGIAGLLML---PAYAIIMDWIGKFCDKELHGKAAGAIGFT 324 (368)
T ss_pred HHHHHHHHH-----ccccHHHHHHHHHHHHhhh---hhHHHHHHHHHHhcchhhcCcccchhhHH
Confidence 332222221 1223333333333332222 34455678899999999999999988763
|
This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix. |
| >PRK09705 cynX putative cyanate transporter; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-31 Score=248.77 Aligned_cols=328 Identities=14% Similarity=0.076 Sum_probs=235.8
Q ss_pred HHHHHHHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHH
Q 013044 50 AILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELIL 129 (451)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~ 129 (451)
.|.+...++++.+..... ..+++.+|.+.+| +|+|..+.|++.+++.+++.+++++.|+++||+|||+++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~-~~~~~~lp~i~~~-------~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~ 79 (393)
T PRK09705 8 NFMLLVLVLIGLNMRPLL-TSVGPLLPQLRQA-------SGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAI 79 (393)
T ss_pred HHHHHHHHHHHHHcchhh-hccchhHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHH
Confidence 444545555555544333 5678999999998 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhccc
Q 013044 130 AALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL 209 (451)
Q Consensus 130 ~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~ 209 (451)
+..+++++.+++++++|++.++++|+++|++.+...+....++.|++| ++|+++++++..+...|..+++.+++++.++
T Consensus 80 ~~~l~~~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~ 158 (393)
T PRK09705 80 SLLLIAVGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQH 158 (393)
T ss_pred HHHHHHHHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999997 8899999999999999999999999998877
Q ss_pred ccchhHHHhhhHHHHHHHHHHhhccc-CchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcc
Q 013044 210 VAGWRYMYGASTPLAVIMGMGMWWLP-ASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSY 288 (451)
Q Consensus 210 ~~~wr~~f~~~~~~~~~~~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (451)
..+||+.+.+.++..++.++..+... +.|+ + +
T Consensus 159 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-----------~------------------------------- 191 (393)
T PRK09705 159 SETWYQTLAWWALPAVVALFAWWWQSAREVA-----S-----------S------------------------------- 191 (393)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHhcCCCc-----c-----------c-------------------------------
Confidence 55899998776665544333322221 1111 0 0
Q ss_pred cccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHh
Q 013044 289 VGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVV 368 (451)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~ 368 (451)
+++ +....+.++++..+...+ ..+....++.....|.|.++++.|. +..+++....+..++.++++++.+++.
T Consensus 192 -~~~-~~~~~~~l~~~~~~~l~~----~~~~~~~~~~~~~~~lp~~l~~~g~-s~~~ag~~~~~~~i~~i~g~~~~g~l~ 264 (393)
T PRK09705 192 -HKT-TTTPVRVVFTPRAWTLGV----YFGLINGGYASLIAWLPAFYIEIGA-SAQYSGSLLALMTLGQAAGALLMPAMA 264 (393)
T ss_pred -cCC-CcCCcccccCHhHHHHHH----HHHHHHHHHHHHHHHHHHHHHHcCC-ChhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 000 001122233322222222 2222223445667788888888888 889999999999999999999999999
Q ss_pred hhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeee-eecchhhhhhhhhhheee
Q 013044 369 ERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYH-FRIFFFEMTRIVCSIYCA 447 (451)
Q Consensus 369 d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 447 (451)
||++||+....+..+..++..++... ..+.... ...+.+.+.+. ..|..... ..+..|++.+++..++.+
T Consensus 265 ~r~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~--~~~l~g~g~g~---~~~~~~~~~~~~~~~~~~~g~~~g~~~ 335 (393)
T PRK09705 265 RHQDRRKLLMLALVLQLVGFCGFIWL----PLQLPVL--WAMVCGLGLGG---AFPLCLLLALDHSVQPAIAGKLVAFMQ 335 (393)
T ss_pred hhccchHHHHHHHHHHHHHHHHHHHc----cchHHHH--HHHHHHHhccc---hHHHHHHHHHhhcCCHHHHHHHHHHHH
Confidence 99999998888776666655543321 1112111 12233334443 33433333 344445678888887655
Q ss_pred ee
Q 013044 448 KL 449 (451)
Q Consensus 448 ~~ 449 (451)
++
T Consensus 336 ~~ 337 (393)
T PRK09705 336 GI 337 (393)
T ss_pred HH
Confidence 43
|
|
| >PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-38 Score=300.67 Aligned_cols=375 Identities=32% Similarity=0.527 Sum_probs=285.1
Q ss_pred HHhhhhhcccccccccccccccCCCCCC---ccc-ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHH
Q 013044 58 ALGGLLYGYDIGSTSCATISIESPTLSG---ISW-YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALL 133 (451)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l 133 (451)
.++.+.++++...++...+......... .++ .+.++.+.+++.+...+|..+|+++.|.++||+|||+.++++.++
T Consensus 6 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~ 85 (451)
T PF00083_consen 6 SLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALL 85 (451)
T ss_pred HHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhcccccccccccccccccccccccccc
Confidence 4555788888877776665554211111 100 111345789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhh---hHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccc
Q 013044 134 YLVGALVTALAP---DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV 210 (451)
Q Consensus 134 ~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~ 210 (451)
..++.++.++++ |++.+.++|+++|++.|+..+....++.|..|+++|++..++.+.++.+|.+++..++..+.+..
T Consensus 86 ~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 165 (451)
T PF00083_consen 86 MIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYS 165 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999 99999999999999999999999999999999999999999999999999999998887664433
Q ss_pred --cchhHHHhhhHHHHHHHHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcc
Q 013044 211 --AGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSY 288 (451)
Q Consensus 211 --~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (451)
.+||+.+.+.++++++..+..+++||||+|+.+|+ +.+|+++.++++++.+..+++. ++..++.++
T Consensus 166 ~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~---------~~~~A~~~l~~~~~~~~~~~~~---~~~~~~~~~ 233 (451)
T PF00083_consen 166 DNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKG---------RDEEAEKVLRKLRGKEIEDEEI---EEIKAEKKE 233 (451)
T ss_pred ccccccccccccccccccccccccccccccceecccc---------cccccccccccccccccccccc---ccccccccc
Confidence 15999999999999887777789999999998887 6677777777765553322222 111111111
Q ss_pred cccccccchhhhhcccc-hhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 013044 289 VGEDKEVSLREVFHGKC-LKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLV 367 (451)
Q Consensus 289 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l 367 (451)
.+ +.+..++++++++. +++..+...+.++.+..+++...+|.+.++++.+. +.. ........+..+++.+++.++
T Consensus 234 ~~-~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~ 309 (451)
T PF00083_consen 234 SQ-ESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGI-SNS--FLATLILGLVNFLGTLLAIFL 309 (451)
T ss_pred cc-ccceeeeecccccccccccccccccccccccccccccccccccccccccc-ccc--ccccccccccccccccccccc
Confidence 11 11256777877754 45666667777777777777888888988888877 333 444456667777788888899
Q ss_pred hhhcCCchhhhchhHHHHHHHHHHHH-hhhccCC---cchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhh
Q 013044 368 VERLGRRPLLLGGVSGIVISLFLLGS-YYLFLDD---VPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCS 443 (451)
Q Consensus 368 ~d~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (451)
.||+|||+.++.+.....++.+.++. ....... ..+..++...++...++. ++.+..+.+..|.+|++.|+++.
T Consensus 310 ~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~--g~~~~~~~~~~ElfPt~~R~~~~ 387 (451)
T PF00083_consen 310 IDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSL--GWGPLPWIYTAELFPTKVRSTGI 387 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccceeeeeccccccc--ccccccccccccccccccccccc
Confidence 99999999999988888887776651 1111122 134445555556667777 78999999999999999999999
Q ss_pred heeeeec
Q 013044 444 IYCAKLR 450 (451)
Q Consensus 444 ~~~~~~~ 450 (451)
+++.++.
T Consensus 388 ~~~~~~~ 394 (451)
T PF00083_consen 388 GLSYAVG 394 (451)
T ss_pred ccccccc
Confidence 9988754
|
Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane |
| >KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-32 Score=244.46 Aligned_cols=352 Identities=18% Similarity=0.192 Sum_probs=244.7
Q ss_pred cchHHHHHHHHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchH
Q 013044 46 SVSAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRR 125 (451)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~ 125 (451)
+++..+...+.+++..++...|+..+....+.+.+. ||++++..|++.+.+.+.+.+++|++|+++|||.||+
T Consensus 27 ~~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~-------fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~ 99 (493)
T KOG1330|consen 27 SMKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTY-------FNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKR 99 (493)
T ss_pred ccccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHh-------cCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcce
Confidence 444455666788899999999999999989888877 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhh
Q 013044 126 ELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSL 205 (451)
Q Consensus 126 ~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~ 205 (451)
++.+|.+++.++.+++++++.||+++++|.+.|+|.+...|+++++++|.+|..+|++++++++.+.++|..+|.+++..
T Consensus 100 v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~ 179 (493)
T KOG1330|consen 100 VIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSV 179 (493)
T ss_pred EEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccchhHHHhhhHHHHHHHH-HHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHH
Q 013044 206 LVDLVAGWRYMYGASTPLAVIMG-MGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILT 284 (451)
Q Consensus 206 l~~~~~~wr~~f~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (451)
+.+....|||.|++.+++++++. +..++++|+++.- +++.|.+.+ .
T Consensus 180 va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga-----~~~~~~~~~----------------~------------ 226 (493)
T KOG1330|consen 180 VASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGA-----RDEVDGENK----------------M------------ 226 (493)
T ss_pred eccCccceEEEEEeehHHHHHHHHHHHhhccCccccc-----ccccccCCc----------------C------------
Confidence 99877469999999999999954 4555566654410 000000000 0
Q ss_pred hhcccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHH----HHcCCCCchhHHHHHHHHHHHHHHH
Q 013044 285 ELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASIL----QSAGFSAASDATRVSILLGLFKLIM 360 (451)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~s~~~~~~~~~~~~~~~~~~ 360 (451)
........++.+.+.+++......+......+. ...+.+|.|.+. +-.++ +..+..++..+...++.+|
T Consensus 227 --~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv----~Gs~sww~p~~~~~~~~~~~~-~~~~~~ifg~vt~~~G~lG 299 (493)
T KOG1330|consen 227 --VKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFV----IGSLSWWAPAFIYYSYELIGF-DHNATLIFGGVTCAGGSLG 299 (493)
T ss_pred --CCCccchHHHHHHHHccCceeeehHHHHHHHHh----ccccchhhhhHHHHHHHHhCC-ccccchhhhhHHHhhchhh
Confidence 000001112233333333222222222222222 223444444443 33455 6778888889999999999
Q ss_pred HHHHHHHhhhcCCc----hhhhch----hHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeec
Q 013044 361 TGLAVLVVERLGRR----PLLLGG----VSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRI 432 (451)
Q Consensus 361 ~~~~g~l~d~~g~~----~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (451)
.+.+|.++||+.|+ ...... ......+...+........+..+..+ .+++++..... .......-+..+
T Consensus 300 vl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~-il~~~g~~~~~--~~~a~n~~i~l~ 376 (493)
T KOG1330|consen 300 VLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGL-ILFLVGETISW--FNWATNNPIFLE 376 (493)
T ss_pred heehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHH-HHHHHHHHHHh--cccccccceeeE
Confidence 99999999994321 111111 11111111111111222223333322 33333333333 234444566778
Q ss_pred chhhhhhhhhhheee
Q 013044 433 FFFEMTRIVCSIYCA 447 (451)
Q Consensus 433 ~~~~~~~~~~~~~~~ 447 (451)
++|+++|.++.++..
T Consensus 377 vV~p~~Rt~a~a~~~ 391 (493)
T KOG1330|consen 377 VVPPSRRTTAYALDT 391 (493)
T ss_pred ecCcccccHHHHHHH
Confidence 889999999987643
|
|
| >KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-31 Score=225.42 Aligned_cols=363 Identities=18% Similarity=0.206 Sum_probs=266.7
Q ss_pred HHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHH
Q 013044 58 ALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVG 137 (451)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~ 137 (451)
..+.....+.....+-+.|..... .+.+..+..++......+..+++..+|.++|++|||+.+.+..+..++.
T Consensus 84 g~gwmad~m~~m~~s~i~~~l~~~-------w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~ 156 (528)
T KOG0253|consen 84 GMGWMADAMEMMLLSLILPALDEV-------WGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVF 156 (528)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhh-------hchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHH
Confidence 344444444444444455555555 6889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHH
Q 013044 138 ALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMY 217 (451)
Q Consensus 138 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f 217 (451)
..+.+.++|+..+.+.|.+.|+|.|+ .|...++-.|..|..+|...+-.. ..+.+|.+....++....... ||||..
T Consensus 157 ~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~-gwr~~l 233 (528)
T KOG0253|consen 157 GVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNF-GWRYLL 233 (528)
T ss_pred HHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhh-hHHHHH
Confidence 99999999999999999999999998 899999999999999998888777 999999999999999988888 999999
Q ss_pred hhhHHHHHHHHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCc----------hhHHH--HHHh
Q 013044 218 GASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAP----------TEVDE--ILTE 285 (451)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~--~~~~ 285 (451)
...+.+..+.....+++||+||+...++ +.++|.+.++++...+...-.. ++.++ ..+.
T Consensus 234 ~~~~~pl~~~a~f~~w~~ESpRf~~~~G---------~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~ 304 (528)
T KOG0253|consen 234 FTSSTPLMFAARFLVWVYESPRFYLAKG---------DDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDS 304 (528)
T ss_pred HHHHhHHHHHHHHHhhcccCcchhhhcC---------ChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhh
Confidence 9999888888888899999999999888 7788888877765443322111 11111 1111
Q ss_pred hcccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcC--------------------CCCchh
Q 013044 286 LSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAG--------------------FSAASD 345 (451)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~s~~~ 345 (451)
.....++...+..+++..+.++..++....++...+. ++........+++... . +...
T Consensus 305 ~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafs-yyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~-s~~~ 382 (528)
T KOG0253|consen 305 KSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFS-YYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPL-SVAK 382 (528)
T ss_pred hhccccccccchHhhcChHHHHHHHHHHHHHHhhHHH-HHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCc-cchh
Confidence 1122334455677777755555555444444443333 3333333333333211 1 1222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCce
Q 013044 346 ATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPS 425 (451)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (451)
-..-.....+..+.|.++.++++||+|||+.+..++++++++.+.+... .......+..+..-++.+. .+.+
T Consensus 383 dYrdllitslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c-----~~rn~~tvllf~arafisg---~fqv 454 (528)
T KOG0253|consen 383 DYRDLLITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTC-----KTRNAYTVLLFTARAFISG---AFQV 454 (528)
T ss_pred HHHHHHHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHh-----cCcchhHHHHHHHHHHHhc---hheE
Confidence 3344667788999999999999999999999999888888877665432 2233333334444444443 5677
Q ss_pred eeeeeecchhhhhhhhhhheeeee
Q 013044 426 KIYHFRIFFFEMTRIVCSIYCAKL 449 (451)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~ 449 (451)
.+.|..|++|+..|+++.|.|+++
T Consensus 455 aYvYtPEVyPTavRatgvGtcSsm 478 (528)
T KOG0253|consen 455 AYVYTPEVYPTAVRATGVGTCSSM 478 (528)
T ss_pred EEEecCcccchhhhhcchhhhhhH
Confidence 899999999999999999998764
|
|
| >TIGR00890 2A0111 Oxalate/Formate Antiporter | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-31 Score=249.36 Aligned_cols=319 Identities=12% Similarity=0.011 Sum_probs=234.1
Q ss_pred ccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhH
Q 013044 68 IGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDF 147 (451)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~ 147 (451)
....++.+|.+.++ +|++.++.|++.+++.+++.+++++.|+++||+|||+++.++.++.+++.+++++++|+
T Consensus 19 ~~~~~~~~~~~~~~-------~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~ 91 (377)
T TIGR00890 19 VYTWTLLAPPLGRY-------FGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSL 91 (377)
T ss_pred HhhhhhHHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHH
Confidence 33567788999888 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHH
Q 013044 148 IIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIM 227 (451)
Q Consensus 148 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~ 227 (451)
+.++++|++.|++.+...+.....+.|++| ++|+++.++...+.++|..+++++.+.+.+.. +||+.|++.+++.++.
T Consensus 92 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~f~~~~~~~~~~ 169 (377)
T TIGR00890 92 AALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLE-GVPAAFIYMGIIFLLV 169 (377)
T ss_pred HHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcc-cHHHHHHHHHHHHHHH
Confidence 999999999999999888888888999987 67999999999999999988777777776665 9999999999888774
Q ss_pred HH-HhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhcccch
Q 013044 228 GM-GMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCL 306 (451)
Q Consensus 228 ~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (451)
.+ ..++++++|+...+++ . + .++++.+.++.++++..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~----~---------------------~-----------------~~~~~~~~~~~~~~~~~ 207 (377)
T TIGR00890 170 IVLGAFLIGYPPGQLIKTN----I---------------------E-----------------VSVKDYTVWEMLRTPQF 207 (377)
T ss_pred HHHHHHheecCchhccccC----c---------------------c-----------------cchhhhhHHHHHcCccH
Confidence 44 4444555432100000 0 0 00011123445555544
Q ss_pred hHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHH
Q 013044 307 KALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVI 386 (451)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~ 386 (451)
+.......+..+. ......+.+.+.++.+. +..+.+.......++.++++++.+++.||++||+.+..+..+..+
T Consensus 208 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~ 282 (377)
T TIGR00890 208 WVLYLSFFLNAVS----GLLLIGLYKPYGQSLGL-SDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAV 282 (377)
T ss_pred HHHHHHHHHHhHH----HHHHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHH
Confidence 4333322222221 12233445556677787 778888999999999999999999999999999988887777777
Q ss_pred HHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheeee
Q 013044 387 SLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCAK 448 (451)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (451)
+.+.+... .....+.......+.+.+.+. ..+....+..|.+|++.|+++.++.+.
T Consensus 283 ~~~~~~~~---~~~~~~~~~~~~~~~g~~~g~---~~~~~~~~~~~~~~~~~~~~~~g~~~~ 338 (377)
T TIGR00890 283 GMAAMLFI---PMLNDVLFLATVALVFFTWGG---TISLFPSLVSDIFGPANSAANYGFLYT 338 (377)
T ss_pred HHHHHHHc---ccchhHHHHHHHHHHHHHhcc---chhccHHHHHHHhhhhhhhhHhHHHHH
Confidence 66554332 111222222333334444443 344555678899999999999887654
|
|
| >PRK10213 nepI ribonucleoside transporter; Reviewed | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.9e-30 Score=243.74 Aligned_cols=298 Identities=17% Similarity=0.238 Sum_probs=217.9
Q ss_pred ccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHH
Q 013044 70 STSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFII 149 (451)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~ 149 (451)
...+.+|.+.++ +|.++++.|+..+++.++..+++++.|+++||+|||++++.+.++.+++.+++++++|++.
T Consensus 38 ~~~~~l~~~~~~-------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (394)
T PRK10213 38 LPVSLLTPMAQD-------LGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSL 110 (394)
T ss_pred HHHhhHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHH
Confidence 445567888887 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHH
Q 013044 150 MVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGM 229 (451)
Q Consensus 150 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~ 229 (451)
++++|+++|++.+...+...+++.|++|+++|++++++...+.++|..++|++++.+.+.. +||+.|++.++++++..+
T Consensus 111 l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~-gw~~~f~~~~~l~~~~~l 189 (394)
T PRK10213 111 LLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELI-GWRNVFNAAAVMGVLCIF 189 (394)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999887 999999998877666433
Q ss_pred H-hhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhcccchhH
Q 013044 230 G-MWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKA 308 (451)
Q Consensus 230 ~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (451)
. ....||+|+. +++...+.++.++++..+.
T Consensus 190 ~~~~~~p~~~~~-------------------------------------------------~~~~~~~~~~~l~~~~~~~ 220 (394)
T PRK10213 190 WIIKSLPSLPGE-------------------------------------------------PSHQKQNTFRLLQRPGVMA 220 (394)
T ss_pred HHHHHCCCCCcc-------------------------------------------------cccchhHHHHHhcCHHHHH
Confidence 3 2335654320 0000112234555543333
Q ss_pred HHHHHHHHHHHHhhchhHHHHh-HHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHH
Q 013044 309 LIIGAGLVLFQQITGQPSVLYY-AASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVIS 387 (451)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 387 (451)
..+...+... +......+ .|.+.++.|+ +....+......+++.+++.++.+++.||.+ |+.+..+..+..++
T Consensus 221 ~~~~~~~~~~----~~~~~~~~~~p~~~~~~g~-s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~ 294 (394)
T PRK10213 221 GMIAIFMSFA----GQFAFFTYIRPVYMNLAGF-GVDGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVS 294 (394)
T ss_pred HHHHHHHHHH----HHHHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHH
Confidence 3322222221 12223334 4777777888 8888999999999999999999999999954 44433333333332
Q ss_pred HHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhh
Q 013044 388 LFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEM 437 (451)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (451)
.+.+... .++.+......++++.+++. ..+...+...+..|++
T Consensus 295 ~~~l~~~----~~~~~~~~~~~~l~G~~~~~---~~~~~~~~~~~~~~~~ 337 (394)
T PRK10213 295 ALVLTLW----GSDKIVATGVAIIWGLTFAL---VPVGWSTWITRSLADQ 337 (394)
T ss_pred HHHHHHH----hhhHHHHHHHHHHHHHHHHh---hhHHHHHHHHHHCccc
Confidence 2222111 23445555556666666655 4444444555555643
|
|
| >PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-31 Score=249.23 Aligned_cols=336 Identities=24% Similarity=0.321 Sum_probs=248.8
Q ss_pred Hhhhhhcccccccccccc-cccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHH
Q 013044 59 LGGLLYGYDIGSTSCATI-SIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVG 137 (451)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~ 137 (451)
++.++..++.....+.+| .+.++ +|.++.+++++.+++.++..+++++.|+++||+|||+++.++.++.+++
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~-------~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~ 75 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEE-------LGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALG 75 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCC-------STTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhH
Confidence 445556666677788888 78887 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHH
Q 013044 138 ALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMY 217 (451)
Q Consensus 138 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f 217 (451)
.++..+++|++.++++|++.|++.+...+...+++.|++|+++|++++++......+|.+++|.+++.+.+.. +||+.|
T Consensus 76 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-~~~~~~ 154 (352)
T PF07690_consen 76 SLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYF-GWRWAF 154 (352)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHC-HHCCHH
T ss_pred HHHhhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcc-cccccc
Confidence 7777777888899999999999999999999999999999999999999999999999999999999999777 999999
Q ss_pred hhhHHHHHHHHHH-hhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhccccccccc-
Q 013044 218 GASTPLAVIMGMG-MWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEV- 295 (451)
Q Consensus 218 ~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 295 (451)
++.+++.++..++ .++++++++....++ +.+++ + +.+++..
T Consensus 155 ~~~~~~~~~~~il~~~~~~~~~~~~~~~~-----~~~~~------------------------~--------~~~~~~~~ 197 (352)
T PF07690_consen 155 LISAILSLIAAILFILFLPEPPPPRERES-----PKESE------------------------S--------KKPKPLKP 197 (352)
T ss_dssp HHHHHHHHHHHHHHHCCC---STTTT--S-----STTTT----------------------------------HHHCCCH
T ss_pred ccccchhhhhhhhHhhhhhhccccccccc-----ccccc------------------------c--------cccccccc
Confidence 9999998885543 345554433100000 00000 0 0001111
Q ss_pred chhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHH-HHHcCCCC-chhHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 013044 296 SLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASI-LQSAGFSA-ASDATRVSILLGLFKLIMTGLAVLVVERLGR 373 (451)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~ 373 (451)
.++.+.+++..+..+....+.. ........+.|.+ .+..|. + ..+.+.......+..+++.++.+++.||+++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 272 (352)
T PF07690_consen 198 GFKSLFKNPVLWILLIAFFLFF----FVFSGFSFFLPLYLQEVLGF-SGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGR 272 (352)
T ss_dssp -CTHHHHHHCCHHHHHHHHHHH----HHHHHHHHHHHHHCCHHHHC-CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ccccccccchhhhhhhhhhHHH----HHHHHhhcccchhhhhccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 2455555544432222222222 1233566777777 566788 6 6888999999999999999999999999999
Q ss_pred chhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheeeee
Q 013044 374 RPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCAKL 449 (451)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (451)
|+..........+....+..... .++..+.....++.+.+.+. ..+....+..+..|++.++++.++.+.+
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 343 (352)
T PF07690_consen 273 RRRLLIAILLLILGALGLLLLPF--SSSPVWLIIALFLIGFGFGI---VFPILFSLIQELVPPEYRGTAFGLFNSI 343 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSHH--HCHHHHHHHHHHHHHHHHHH---HCHHHHHHHHCCCHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHHHHH---HHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 87777666665555544432211 23344455555566666665 5777888999999999999999887653
|
These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A. |
| >TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.9e-31 Score=248.58 Aligned_cols=327 Identities=15% Similarity=0.108 Sum_probs=240.2
Q ss_pred hhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHH
Q 013044 62 LLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVT 141 (451)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~ 141 (451)
+..........+..|.+.++ +|.++.+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.+++
T Consensus 15 ~~~~~~~~~~~~~~p~~~~~-------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~ 87 (385)
T TIGR00710 15 ILGPLGIDMYLPAFPEIAAD-------LSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGL 87 (385)
T ss_pred HHHHHHHHHhcccHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHH
Confidence 44455667778889999888 99999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhH
Q 013044 142 ALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGAST 221 (451)
Q Consensus 142 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~ 221 (451)
+++++++.+++.|++.|++.+...+...+++.|++|+++|+++.++.+....+|..+++.+++.+.+.. +||+.|++.+
T Consensus 88 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~~~~~~~~~~ 166 (385)
T TIGR00710 88 ALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWL-SWHAIFAFLS 166 (385)
T ss_pred HHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999998877 9999999988
Q ss_pred HHHHHHH-HHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhh
Q 013044 222 PLAVIMG-MGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREV 300 (451)
Q Consensus 222 ~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (451)
++.++.. +..++.||+++. + ++ .+ .++.....++.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~----~--~~----~~----------------------------------~~~~~~~~~~~ 202 (385)
T TIGR00710 167 LAGILLSALIFFILPETLPY----E--AR----IQ----------------------------------ISTYFETFLLL 202 (385)
T ss_pred HHHHHHHHHHHHhCCCCCCC----c--cc----CC----------------------------------HHHHHHHHHHH
Confidence 8777743 444456665320 0 00 00 00001123445
Q ss_pred hcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHH-HcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhc
Q 013044 301 FHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQ-SAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLG 379 (451)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~ 379 (451)
++++..+...+...... ........+.|.+++ +.|+ ++.+.+.......++.+++.++.+++.||+++|+.+..
T Consensus 203 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~-~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~ 277 (385)
T TIGR00710 203 LKSKMFWGYALIYGASF----GGFFAFFSGAPFVYIDIMGV-SPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRM 277 (385)
T ss_pred HcCchhHHHHHHHHHHH----HHHHHHHHcChHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 55544443333222222 122344455666665 6788 88899999999999999999999999999999998887
Q ss_pred hhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheeeee
Q 013044 380 GVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCAKL 449 (451)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (451)
+..+..++..++...................+.+.+.+. ..+.......|..| +.++++.++.++.
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~-~~~g~~~~~~~~~ 343 (385)
T TIGR00710 278 GLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSM---ISSIAMAYALEDFP-HVAGTASALFGTL 343 (385)
T ss_pred HHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH---HHHHHHHHHhccCc-ccchHHHHHHHHH
Confidence 777666665554432211111122223333344444443 34444555556655 4678877765543
|
This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033. |
| >PRK03893 putative sialic acid transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.9e-30 Score=249.75 Aligned_cols=374 Identities=15% Similarity=0.161 Sum_probs=250.2
Q ss_pred HHHHHHHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHH
Q 013044 50 AILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELIL 129 (451)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~ 129 (451)
.+..+..++++.++.+++....++.+|.+.++ +|+++.+.+++.+.+.+++.+++++.|+++||+|||++++.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-------~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 90 (496)
T PRK03893 18 QWKAFSAAWLGYLLDGFDFVLITLVLTEVQGE-------FGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVI 90 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 44455667778888888999999999999888 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhccc
Q 013044 130 AALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL 209 (451)
Q Consensus 130 ~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~ 209 (451)
+.++.+++.++.++++|++.++++|++.|++.+...+....++.|++|+++|++++++...+..+|..+++.+++.+.+.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 170 (496)
T PRK03893 91 SIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPV 170 (496)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred ccchhHHHhhhHHHHHHHHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHH---hh
Q 013044 210 VAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILT---EL 286 (451)
Q Consensus 210 ~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 286 (451)
. +||+.|++..+..++.++....+||++++...++++ .+. ++. .+.....+. ........... ..
T Consensus 171 ~-~w~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~--~~~----~~~---~~~~~~~~~--~~~~~~~~~~~~~~~~ 238 (496)
T PRK03893 171 W-GWRALFFIGILPIIFALWLRKNLPEAEDWKEKHAGK--APV----RTM---VDILYRGEH--RIINILLTLAAAAALW 238 (496)
T ss_pred C-CHHHHHHHHHHHHHHHHHHHHhCCCchhhhhhcccc--ccc----hhH---HHHHhcchh--HHHHHHHHHHHHHHHH
Confidence 7 999999876555444444445567776542211100 000 000 000000000 00000000000 00
Q ss_pred cccccccccchhh---------------hhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHH-HcCCCCchhHHHHH
Q 013044 287 SYVGEDKEVSLRE---------------VFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQ-SAGFSAASDATRVS 350 (451)
Q Consensus 287 ~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~ 350 (451)
..........+.. .......++.........+..+........+.|.+++ +.|+ +..+.+...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~-~~~~~g~~~ 317 (496)
T PRK03893 239 FCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGY-DPHTVANVL 317 (496)
T ss_pred HHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCC-CHHHHHHHH
Confidence 0000000000000 0000011111112222222222222234567788885 7788 889999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeee
Q 013044 351 ILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHF 430 (451)
Q Consensus 351 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (451)
....++.+++.++.|++.||++||+.+..+..+..+..+.+... .....+......+...+.+. +..+....+.
T Consensus 318 ~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 391 (496)
T PRK03893 318 FFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAI----GGANVWVLGLLLFFQQMLGQ--GISGLLPKLI 391 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhc----cccHHHHHHHHHHHHHHHhc--ccchhhHHHH
Confidence 99999999999999999999999998877665554443322211 12222222222222223333 3345555677
Q ss_pred ecchhhhhhhhhhheeeee
Q 013044 431 RIFFFEMTRIVCSIYCAKL 449 (451)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~ 449 (451)
.+.+|++.|+++.++..++
T Consensus 392 ~~~~~~~~~g~~~~~~~~~ 410 (496)
T PRK03893 392 GGYFDTEQRAAGLGFTYNV 410 (496)
T ss_pred HhhCCHHHhhcccchhhhh
Confidence 8889999999999886554
|
|
| >PRK10091 MFS transport protein AraJ; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.5e-30 Score=242.61 Aligned_cols=319 Identities=14% Similarity=0.147 Sum_probs=231.0
Q ss_pred HHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHH
Q 013044 56 FPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYL 135 (451)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~ 135 (451)
..++..+..+.......+.+|.+.+| +|.+.++.|++.+.+.+++.+++++.|+++||+|||+++.++.++.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~l~~~~~~-------~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 79 (382)
T PRK10091 7 SLALGTFGLGMAEFGIMGVLTELAHD-------VGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCV 79 (382)
T ss_pred HHHHHHHHHHhhHHHHHhChHHHHHH-------cCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHH
Confidence 44556666777777888899999988 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhH
Q 013044 136 VGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRY 215 (451)
Q Consensus 136 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~ 215 (451)
++.+++++++|++.+++.|+++|++.+...+....++.|++++++|++++++...+..+|..+++++++.+.+.. +||+
T Consensus 80 ~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-gwr~ 158 (382)
T PRK10091 80 IGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEF-SWRY 158 (382)
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhc-cHHH
Confidence 999999999999999999999999999989999999999999999999999999999999999999999998877 9999
Q ss_pred HHhhhHHHHHHHH-HHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccc
Q 013044 216 MYGASTPLAVIMG-MGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKE 294 (451)
Q Consensus 216 ~f~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (451)
.|++.+++.++.. ...+++||.++. . +. + .+
T Consensus 159 ~f~~~~~~~~~~~~~~~~~lp~~~~~----~-----~~--~-------------------------------------~~ 190 (382)
T PRK10091 159 TFLLIAVFNIAVLASIYFWVPDIRDE----A-----KG--G-------------------------------------LR 190 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCcc----c-----cc--C-------------------------------------HH
Confidence 9999988777643 344456764320 0 00 0 00
Q ss_pred cchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHH-HHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 013044 295 VSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASIL-QSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGR 373 (451)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~ 373 (451)
.. .+.++++..+..... ..+ ...+......|.+.++ +..|+ +..+.+.......++.++++++.+++.||+++
T Consensus 191 ~~-~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~g~-s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~ 264 (382)
T PRK10091 191 EQ-FHFLRSPAPWLIFAA---TMF-GNAGVFAWFSYIKPYMMFISGF-SETSMTFIMMLVGLGMVLGNLLSGRLSGRYSP 264 (382)
T ss_pred HH-HHHhcChHHHHHHHH---HHH-HHHHHHHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHHHHHhHHHheeccccCc
Confidence 00 112333222221111 111 1112222333444444 45788 88899999999999999999999999999999
Q ss_pred chhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhh
Q 013044 374 RPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVC 442 (451)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (451)
|+.+..+..+..++.+++... .+..+...+..++...+... ...+.......+..|++.++.+
T Consensus 265 ~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~ 327 (382)
T PRK10091 265 LRIAAVTDFIIVLALLMLFFF----GGMKTASLIFAFICCAGLFA--LSAPLQILLLQNAKGGELLGAA 327 (382)
T ss_pred hhHHHHHHHHHHHHHHHHHHH----HhhHHHHHHHHHHHHHHHHh--hhHHHHHHHHHhCCcchHHHHH
Confidence 998888777766665443321 12233333333333333322 2233333344455555555554
|
|
| >TIGR00893 2A0114 d-galactonate transporter | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-31 Score=249.63 Aligned_cols=346 Identities=16% Similarity=0.160 Sum_probs=240.4
Q ss_pred hhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHH
Q 013044 63 LYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTA 142 (451)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~ 142 (451)
...++...++...|.+.++ +|.++.+.|++.+++.++..++.++.|+++||+|||+++..+.++.+++.++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~-------~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~ 77 (399)
T TIGR00893 5 INYLDRANLSFAAPMLQED-------LGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQA 77 (399)
T ss_pred HHHHHHHhhhHhHHHHHHh-------hCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHH
Confidence 3445666777888888887 899999999999999999999999999999999999999999999999999999
Q ss_pred HhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHH
Q 013044 143 LAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTP 222 (451)
Q Consensus 143 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~ 222 (451)
+++|++.++++|++.|++.+...+...+++.|++|+++|++++++.+....+|.++++.+++.+.+.. +||+.|++.++
T Consensus 78 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~~~~~~~~~~ 156 (399)
T TIGR00893 78 FAGAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHF-SWQWAFIIEGV 156 (399)
T ss_pred HHcCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhC-CchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999988887 99999999888
Q ss_pred HHHHHHH-HhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhh
Q 013044 223 LAVIMGM-GMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVF 301 (451)
Q Consensus 223 ~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (451)
+.++..+ ..++.||+|+.. +..+ +++.....+...... +.+..++.++...++.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~------~~~~----~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~ 212 (399)
T TIGR00893 157 LGIIWGVLWLKFIPDPPQKA------KWLT----EEEKYIVVGGLLAEQ--------------QGKGPSTPKKYQIKELL 212 (399)
T ss_pred HHHHHHHHhhheecCCCCcc------ccCC----HHHHhhcchhhcccc--------------ccccccCCCccchHHHh
Confidence 8777444 444556654310 0000 000000000000000 00001112233455666
Q ss_pred cccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHH-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhh-c
Q 013044 302 HGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLL-G 379 (451)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~-~ 379 (451)
+++..+...+ ..+...........+.|.++++ .+. +..+.+.......++.+++.++.+++.||++||+... .
T Consensus 213 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 287 (399)
T TIGR00893 213 KDRRVWGLAL----GQFLVNIGLGFFLTWFPTYLVQERGL-SILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVF 287 (399)
T ss_pred cCHHHHHHHH----HHHHHHhHHHHHHHHHHHHHHHHhcc-cHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhH
Confidence 6543333222 2222233344566677777754 577 8888999999999999999999999999999986211 1
Q ss_pred hhHHHHHHHHHHHHhhh-cc-CCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheeeee
Q 013044 380 GVSGIVISLFLLGSYYL-FL-DDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCAKL 449 (451)
Q Consensus 380 ~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (451)
......++.+....... .. .+..+.. + ......+.+. +..+....+..|..|++.|+++.++.+.+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 355 (399)
T TIGR00893 288 ARKTAIIAGLVLSLLMFATNYVNIPYAA-L-ALVALGFFGL--GAGAIGWALISDNAPGNIAGLTGGLINSL 355 (399)
T ss_pred HHHHHHHHHHHHHHHHHHhccchhHHHH-H-HHHHHHHhch--hhhhHHHHHHHhhcChhHHHHHHHHHHHH
Confidence 11111111111111111 11 1122222 2 2222233333 45777888999999999999999887654
|
|
| >PRK15402 multidrug efflux system translocase MdfA; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-30 Score=244.02 Aligned_cols=342 Identities=15% Similarity=0.113 Sum_probs=249.3
Q ss_pred hHHHHHHHHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHH
Q 013044 48 SAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRREL 127 (451)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~ 127 (451)
++.++..+.+.+..+...+....+.+.+|.+.++ ++.++.+.++..+.+.+++.+++++.|+++||+|||+++
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-------~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l 81 (406)
T PRK15402 9 RQALLFPLCLVLFEFATYIANDMIQPGMLAVVED-------FNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVM 81 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH
Confidence 5556666777788888888888888999998888 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhc
Q 013044 128 ILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLV 207 (451)
Q Consensus 128 ~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~ 207 (451)
+++.++.+++.+++.++++++.+++.|+++|++.+...+...+++.|++|+++|++..++......+|..++|.+++.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~ 161 (406)
T PRK15402 82 LAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALI 161 (406)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999888999999999999999999999998888999999999999998
Q ss_pred ccccchhHHHhhhHHHHHHHHH-HhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhh
Q 013044 208 DLVAGWRYMYGASTPLAVIMGM-GMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTEL 286 (451)
Q Consensus 208 ~~~~~wr~~f~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (451)
+.. +||+.|++.+++.++..+ ..+..||+++.. + + + . ..
T Consensus 162 ~~~-~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~--~-----~--------------------~~------- 201 (406)
T PRK15402 162 HVL-PWRGMFVLFAALAALSFFGLWRAMPETAGRV---G--E--K-----L--------------------SL------- 201 (406)
T ss_pred Hcc-CccHHHHHHHHHHHHHHHHHHHhCCCCCccc---c--c--c-----c--------------------cH-------
Confidence 876 999999998888777444 344566654210 0 0 0 0 00
Q ss_pred cccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHH-HHcCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 013044 287 SYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASIL-QSAGFSAASDATRVSILLGLFKLIMTGLAV 365 (451)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g 365 (451)
++...+++.+++++..+...+...+... .......+.|.++ +..|. ++.+.+.......++.+++.++.+
T Consensus 202 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~p~~~~~~~g~-~~~~~g~~~~~~~~~~~~g~~~~g 272 (406)
T PRK15402 202 ----KELGRDYKLVLKNRRFVAGALALGLVSL----PLLAWIALSPVILISGEQL-SSYEYGLLQVPVFGALIAGNLTLA 272 (406)
T ss_pred ----HHHHHHHHHHHcCcHHHHHHHHHHHHHH----HHHHHHHHhHHHHHHHhCC-CHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0001123455666543333332222221 1123334456665 45677 778888887888888999999999
Q ss_pred HHhhhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhhe
Q 013044 366 LVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIY 445 (451)
Q Consensus 366 ~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (451)
++.||+++|+.+..+..+..++..++...........++......+++.+.+. ..+........ .+++.+++..++
T Consensus 273 ~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~---~~~~~~~~~~~-~~~~~~g~~~~~ 348 (406)
T PRK15402 273 RLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGL---ANAGLYRLTLF-SSDVSKGTVSAA 348 (406)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHH---HhhhHHHHHhh-hccccccHHHHH
Confidence 99999999998888877776666665543222223334444455555555554 22322222222 234678887776
Q ss_pred eeee
Q 013044 446 CAKL 449 (451)
Q Consensus 446 ~~~~ 449 (451)
.+..
T Consensus 349 ~~~~ 352 (406)
T PRK15402 349 MGML 352 (406)
T ss_pred HHHH
Confidence 5543
|
|
| >TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-29 Score=245.04 Aligned_cols=292 Identities=15% Similarity=0.125 Sum_probs=217.3
Q ss_pred HHHHHHHHHHhhhhhcccccccccccccccCCCCCC---------------cccccCCchhHHHHHHHHHHHHHHHHHHH
Q 013044 50 AILPFLFPALGGLLYGYDIGSTSCATISIESPTLSG---------------ISWYDLSSVEIGLITSGSLYGALIGSILA 114 (451)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~s~~~~g~~~s~~~~~~~~~~~~~ 114 (451)
.+.+..+++++......|+..++...+.+.++.... ..+++++..+.|++.+++.+++.+++++.
T Consensus 17 r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~ 96 (465)
T TIGR00894 17 RLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIIIQIPV 96 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHHHcch
Confidence 344556666677777888888888888876521110 11379999999999999999999999999
Q ss_pred hhhhhhhcchHHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHH
Q 013044 115 FNIADILGRRRELILAALLYLVGALVTALA--PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFI 192 (451)
Q Consensus 115 g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~ 192 (451)
|+++||+|||+++..+.++++++.+++.++ .+++.+++.|+++|++.+...+....++.|++|+++|++++++...+.
T Consensus 97 g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 176 (465)
T TIGR00894 97 GYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGF 176 (465)
T ss_pred HHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999887554 568889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhh-cccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCC
Q 013044 193 VLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMW-WLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSI 271 (451)
Q Consensus 193 ~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (451)
.+|.++++++++.+.+...+||+.|++.++++++..+.++ +.+|+|+.. ++. .++|. +..+... .
T Consensus 177 ~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~------~~~----~~~~~-~~i~~~~--~- 242 (465)
T TIGR00894 177 QLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIH------PCI----SKFEK-KYINSSL--Q- 242 (465)
T ss_pred HHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccC------CCC----CHHHH-HHHHhhc--c-
Confidence 9999999999999987622999999999998887555444 455665410 000 00110 0000000 0
Q ss_pred CCCCchhHHHHHHhhcccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHH-cCCCCchhHHHHH
Q 013044 272 GDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVS 350 (451)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~ 350 (451)
+ +..+.+.+.+++++++++..+.. .+..+......+.+..|.|.++++ .|+ +..+.++..
T Consensus 243 ~--------------~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~lp~~l~~~~g~-s~~~~g~~~ 303 (465)
T TIGR00894 243 G--------------QKGSTRQSLPIKAIPKSLPVWAI----WFAIFGHFWLYTILPTYLPTFISWVLRV-SGKENGLLS 303 (465)
T ss_pred c--------------ccCCCCCCCCHHHHhcCHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhCc-ChHHhHHHH
Confidence 0 00011123356777776433333 233333344455677788888764 688 888999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCc
Q 013044 351 ILLGLFKLIMTGLAVLVVERLGRR 374 (451)
Q Consensus 351 ~~~~~~~~~~~~~~g~l~d~~g~~ 374 (451)
....++.+++.++.|+++||.++|
T Consensus 304 ~~~~~~~~i~~~~~g~l~d~~~~~ 327 (465)
T TIGR00894 304 SLPYLFAWLCSIFAGYLADFLKSS 327 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999999997644
|
|
| >PRK10504 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=244.27 Aligned_cols=369 Identities=17% Similarity=0.179 Sum_probs=253.7
Q ss_pred HHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHH
Q 013044 56 FPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYL 135 (451)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~ 135 (451)
.++++.++..++...+++.+|.+.++ +|.++.+.+++.+.+.++..++.+++|+++||+|||++++.+.++.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~p~~~~~-------~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~ 86 (471)
T PRK10504 14 IVAFGFFMQSLDTTIVNTALPSMAQS-------LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFT 86 (471)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHH-------hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 34455667777888888899999888 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhH
Q 013044 136 VGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRY 215 (451)
Q Consensus 136 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~ 215 (451)
++.++++++++++.++++|+++|++.+...+...+++.|++|+++|+++.++.....++|..+||.+++.+.+.. +||+
T Consensus 87 ~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~-gw~~ 165 (471)
T PRK10504 87 LGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYA-SWHW 165 (471)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhc-cHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999887 9999
Q ss_pred HHhhhHHHHHHHHH-HhhcccCchHHHHHhhccccCCccchHHHHHHHHHHH---hCCCCCCCCchhHHHH---------
Q 013044 216 MYGASTPLAVIMGM-GMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRL---RGQSIGDSAPTEVDEI--------- 282 (451)
Q Consensus 216 ~f~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~--------- 282 (451)
.|++......+..+ .....|+.+. +.++.|..+............ .+..............
T Consensus 166 ~f~~~~~~~~l~~~~~~~~~~~~~~------~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (471)
T PRK10504 166 IFLINIPVGIIGAIATLMLMPNYTM------QTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALL 239 (471)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCccc------cCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHH
Confidence 99998877666433 3333444321 111122211111111111111 1111000000000000
Q ss_pred HHhhcccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHH-cCCCCchhHHHHHHHHHHHHHHHH
Q 013044 283 LTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKLIMT 361 (451)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~ 361 (451)
....++...+++....++++++.+.......++..+ +.....++.|++++. .|+ ++...++...+..++.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~g~-~~~~~g~~~~~~~~~~~~~~ 314 (471)
T PRK10504 240 LYLLHARNNNRALFSLKLFRTRTFSLGLAGSFAGRI----GSGMLPFMTPVFLQIGLGF-SPFHAGLMMIPMVLGSMGMK 314 (471)
T ss_pred HHHHHHhcCCCCccCHHHhcccchHHHHHHHHHHHH----HHHHHHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHHH
Confidence 000001111112222346777655554443333322 233455677888774 687 88899999999999999999
Q ss_pred HHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhh
Q 013044 362 GLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIV 441 (451)
Q Consensus 362 ~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (451)
++.+++.||+|+|+.+..+..+..+...++... ....+.+.......+.+.+.+. ..+....+..+..|++.++.
T Consensus 315 ~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~g~ 389 (471)
T PRK10504 315 RIVVQVVNRFGYRRVLVATTLGLALVSLLFMLV--ALLGWYYLLPFVLFLQGMVNST---RFSSMNTLTLKDLPDNLASS 389 (471)
T ss_pred HHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhc--cccccHHHHHHHHHHHHHHHHH---HHHHHHHHHHHcCCHHhccc
Confidence 999999999999999988877776665554332 1112222222233333344444 23344566667788899998
Q ss_pred hhheeee
Q 013044 442 CSIYCAK 448 (451)
Q Consensus 442 ~~~~~~~ 448 (451)
+.++.+.
T Consensus 390 ~~~~~~~ 396 (471)
T PRK10504 390 GNSLLSM 396 (471)
T ss_pred hHHHHHH
Confidence 8876544
|
|
| >TIGR00900 2A0121 H+ Antiporter protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=243.41 Aligned_cols=332 Identities=16% Similarity=0.075 Sum_probs=246.1
Q ss_pred HhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHH
Q 013044 59 LGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGA 138 (451)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~ 138 (451)
.+.++..+......+.+|....+ ++.++.+.|++.+++.++..+++++.|+++||+|||++++.+.++..++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~ 78 (365)
T TIGR00900 6 AAQLISLIGTAITQVALPLYVLA-------GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLV 78 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-------hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHH
Confidence 33444555566667777777766 78899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhh-----hHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccch
Q 013044 139 LVTALAP-----DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGW 213 (451)
Q Consensus 139 ~~~~~~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~w 213 (451)
++.++.+ +++.++++|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.+++|.+++.+.+.. +|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-g~ 157 (365)
T TIGR00900 79 AVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATL-GI 157 (365)
T ss_pred HHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh-hH
Confidence 9888887 99999999999999999999999999999999999999999999999999999999999998887 99
Q ss_pred hHHHhhhHHHHHHHHHHhhccc--CchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhccccc
Q 013044 214 RYMYGASTPLAVIMGMGMWWLP--ASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGE 291 (451)
Q Consensus 214 r~~f~~~~~~~~~~~~~~~~~~--e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (451)
|+.|++.++..++..+..+.++ |+++ . ++.+ ..++ .. +
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~---~~~~-------------------~~-----------~ 197 (365)
T TIGR00900 158 KWAIWVDAVGFAISALLIVSVRIPELAA-----S--EIQA---LSNA-------------------VL-----------R 197 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccCCC-----c--cccc---cchh-------------------HH-----------H
Confidence 9999988877666444443332 2211 0 0000 0000 00 0
Q ss_pred ccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHH-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 013044 292 DKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKLIMTGLAVLVVER 370 (451)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~ 370 (451)
+.+..++.+++++..+...+...+..+.. ......+.|.+.++ .+. +..+.+.......++.+++.++.+++.||
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 273 (365)
T TIGR00900 198 DTREGIKFVLKNPLLRTLLLLALLFNLVF---APAIVALFPYVQSKYLGR-GSTHYGWVLAAFGLGALLGALLLGLLGRY 273 (365)
T ss_pred HHHhHHHHHHcCcHHHHHHHHHHHHHHHH---HHHHHHHhHHHHHHHhCC-chHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01112445566655444443333332221 11222566777765 677 88889999999999999999999999999
Q ss_pred cCCchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheeeee
Q 013044 371 LGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCAKL 449 (451)
Q Consensus 371 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (451)
.+||+.+..+....+++...+... .++.+...+..++.+.+.+. ..+....+..+..|++.|+++.++.+.+
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 345 (365)
T TIGR00900 274 FKRMALMTGAIFVIGLAILVVGLT----PPNFPLFLVLWFAIGVGYGP---INVPQGTLLQRRVPAELLGRVFGAQFSL 345 (365)
T ss_pred hchhHHHHHHHHHHHHHHHHHHhh----chhHHHHHHHHHHHHHHHHH---HHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 999998887766666655544332 11244445555555555554 4666778888999999999999876654
|
|
| >TIGR00881 2A0104 phosphoglycerate transporter family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.5e-31 Score=247.13 Aligned_cols=348 Identities=16% Similarity=0.063 Sum_probs=236.0
Q ss_pred hhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHH
Q 013044 61 GLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALV 140 (451)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~ 140 (451)
++...++...++...|.+.++ +|.++.+.|++.+++.++..+++++.|+++||+|||++++++.++.+++.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~-------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 76 (379)
T TIGR00881 4 YAAYYLVRKNFALAMPYLVEE-------IGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLF 76 (379)
T ss_pred hhHHHHhHHhhhhhhHHHHHH-------hCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHH
Confidence 445566777888888998888 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHH-HHhhhhcccccchhHHHhh
Q 013044 141 TALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGY-GIGSLLVDLVAGWRYMYGA 219 (451)
Q Consensus 141 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~-~l~~~l~~~~~~wr~~f~~ 219 (451)
++++++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++ .+++.+.+.. +||+.|++
T Consensus 77 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~ 155 (379)
T TIGR00881 77 FGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELY-SWHWVFIV 155 (379)
T ss_pred HHHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcC-CchhHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999 5666666665 99999999
Q ss_pred hHHHHHH-HHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchh
Q 013044 220 STPLAVI-MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLR 298 (451)
Q Consensus 220 ~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (451)
.+++.++ .++..++.||+|+....++ .+.. +.++ .++. . +..+...+..+...+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~------------~~~~--~------~~~~~~~~~~~~~~~ 210 (379)
T TIGR00881 156 PGIIAIIVSLICFLLLRDSPQSCGLPP----AEEM-PNEE------------PDGD--A------EKKEEELTKKQIFLQ 210 (379)
T ss_pred HHHHHHHHHHHHheeeCCCccccccCc----cccC-cccc------------cccc--c------ccccccccchHHHHH
Confidence 8887776 4455556677654210000 0000 0000 0000 0 000000111122344
Q ss_pred hhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHH-HcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhh
Q 013044 299 EVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQ-SAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLL 377 (451)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~ 377 (451)
.+++++..+...+...+.. ........+.|.+++ ..|+ +..+.+.......++.+++.++.+++.||..+++..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~ 285 (379)
T TIGR00881 211 YVLLNKVLWYISLGYVFVY----VVRTGILDWSPLYLTQEKGF-SKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRG 285 (379)
T ss_pred HHHhcchHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcch
Confidence 5556554443333322222 223355567777765 4688 888999999999999999999999999986433222
Q ss_pred hchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheeeee
Q 013044 378 LGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCAKL 449 (451)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (451)
.............+.........+.+...+..++.+.. .. +..+....+..|.+|++.|+++.++.+..
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~--~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 354 (379)
T TIGR00881 286 PLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFL-VY--GPQMLIGVIASELAPKKAAGTAAGFVGFF 354 (379)
T ss_pred HHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHH-Hh--hhhHHHHHHHHHhcCcchhHHHHHHHHHh
Confidence 22222111111111111111112222222222232222 22 23444456778999999999999887654
|
|
| >PLN00028 nitrate transmembrane transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5e-29 Score=239.61 Aligned_cols=260 Identities=15% Similarity=0.129 Sum_probs=186.8
Q ss_pred cccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHh
Q 013044 65 GYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA 144 (451)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~ 144 (451)
.+......+.+|.+.++ +|++..+.+++.+.+.+++.+++++.|+++||+|||+++..+.++++++.++++++
T Consensus 49 ~~~~~~~~~~~~~l~~~-------~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~ 121 (476)
T PLN00028 49 FVSTFAAAPLLPIIRDN-------LNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLV 121 (476)
T ss_pred HHHHHHHHHHHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHh
Confidence 33444567778888888 99999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcc----c----ccchhHH
Q 013044 145 PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD----L----VAGWRYM 216 (451)
Q Consensus 145 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~----~----~~~wr~~ 216 (451)
++++.++++|++.|++.+... ....+++|++|+++|++++++.....++|..+++.+...+.. . ..|||+.
T Consensus 122 ~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~ 200 (476)
T PLN00028 122 SSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIA 200 (476)
T ss_pred cCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHH
Confidence 999999999999999988654 456688999999999999999987777777777665544321 1 1289999
Q ss_pred HhhhHHHHHHHHHHhhcccC-chHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhccccccccc
Q 013044 217 YGASTPLAVIMGMGMWWLPA-SPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEV 295 (451)
Q Consensus 217 f~~~~~~~~~~~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (451)
|++.++++++..+..+++++ .|+. ..++..+ .. +.++.....
T Consensus 201 f~i~g~l~l~~~l~~~~~~~~~p~~--------------~~~~~~~-------~~----------------~~~~~~~~~ 243 (476)
T PLN00028 201 FFVPGLLHIIMGILVLTLGQDLPDG--------------NYRELKK-------SG----------------TMPKDSFSK 243 (476)
T ss_pred HHHHHHHHHHHHHHHHHHcCcCCCC--------------chhhHHh-------cC----------------ccccccHHH
Confidence 99999988875555444443 2310 0000000 00 000000011
Q ss_pred chhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHH-HcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCc
Q 013044 296 SLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQ-SAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRR 374 (451)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~ 374 (451)
.+++.++++..+...+... ...........+.|.++. ..|+ +..+++.......++.++++++.|+++||++||
T Consensus 244 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~p~~l~~~~g~-s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r 318 (476)
T PLN00028 244 VLRYGVTNYRTWILALTYG----YSFGVELTMDNIIAEYFYDRFGL-SLETAGAIAASFGLMNLFARPAGGYLSDVAARR 318 (476)
T ss_pred HHHHHHcCchhHHHHHHHH----HHHHHHHHHHhHHHHHHHHhcCC-CHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHh
Confidence 2344455443333222221 112222334556676664 4688 888999999999999999999999999999865
|
|
| >PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.4e-30 Score=245.51 Aligned_cols=350 Identities=14% Similarity=0.041 Sum_probs=226.9
Q ss_pred HHHHHHHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHH
Q 013044 50 AILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELIL 129 (451)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~ 129 (451)
.|..+...++.......++..++..+|.+.++ |+++.+.|++.+++.+++++++++.|+++||+|||+++++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~--------g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~ 98 (452)
T PRK11273 27 RWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ--------GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPA 98 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHH
Confidence 34444445555566666665566777877653 8899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhh----hHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHH-HHHHHhh
Q 013044 130 AALLYLVGALVTALAP----DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMV-GGYGIGS 204 (451)
Q Consensus 130 ~~~l~~~~~~~~~~~~----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~-~g~~l~~ 204 (451)
+.++.+++.+++++++ +++.+++.|++.|++.+...+.....+.|++|+++|++++++++.+.++|.. .+++++.
T Consensus 99 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~ 178 (452)
T PRK11273 99 GLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLL 178 (452)
T ss_pred HHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 9999999999888763 7888999999999999998888888999999999999999999999999864 5565544
Q ss_pred hhcccccchhHHHhhhHHHHHH-HHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHH
Q 013044 205 LLVDLVAGWRYMYGASTPLAVI-MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEIL 283 (451)
Q Consensus 205 ~l~~~~~~wr~~f~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (451)
.+.... +||+.|++.+++.++ .++..+++||+|+....++ +++.++ +..+. .+
T Consensus 179 ~~~~~~-gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~----------~~~~~~---~~~~~-~~----------- 232 (452)
T PRK11273 179 GMAWFN-DWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPP----------IEEYKN---DYPDD-YN----------- 232 (452)
T ss_pred HHHHhc-cHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCC----------hhhhhh---ccccc-cc-----------
Confidence 443333 999999998887777 4556667788775311000 000000 00000 00
Q ss_pred Hhhcccccccccchh-----hhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHH-cCCCCchhHHHHHHHHHHHH
Q 013044 284 TELSYVGEDKEVSLR-----EVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFK 357 (451)
Q Consensus 284 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~ 357 (451)
.+++++.+.+ .+++++..+...+...+.. ...+....|.|.++++ .|+ +..+++....+..++.
T Consensus 233 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~~P~~l~~~~g~-s~~~~~~~~~~~~~~~ 302 (452)
T PRK11273 233 -----EKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVY----LLRYGILDWSPTYLKEVKHF-ALDKSSWAYFLYEYAG 302 (452)
T ss_pred -----cccCCCccHHHHHHHHHHcChHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHH
Confidence 0000011111 2344433333333222222 2234566788888876 577 7788888888999999
Q ss_pred HHHHHHHHHHhhhc--CCchhhh-chhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecch
Q 013044 358 LIMTGLAVLVVERL--GRRPLLL-GGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFF 434 (451)
Q Consensus 358 ~~~~~~~g~l~d~~--g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (451)
+++.++.|+++||+ +||+... ....+..++...+. .....+.+...+..+.++.... +.......+..|.+
T Consensus 303 ~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~ 376 (452)
T PRK11273 303 IPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYW---LNPAGNPTVDMACMIVIGFLIY---GPVMLIGLHALELA 376 (452)
T ss_pred HHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHH---HhcccChHHHHHHHHHHHHHHH---hHHHHHHHHHHHHc
Confidence 99999999999998 4444322 22222222222111 1111222222222222222111 11222234566889
Q ss_pred hhhhhhhhhheeeee
Q 013044 435 FEMTRIVCSIYCAKL 449 (451)
Q Consensus 435 ~~~~~~~~~~~~~~~ 449 (451)
|++.|+++.|+.+.+
T Consensus 377 p~~~~g~~~g~~~~~ 391 (452)
T PRK11273 377 PKKAAGTAAGFTGLF 391 (452)
T ss_pred ChhhhhhHHHHHHHH
Confidence 999999999987543
|
|
| >KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-29 Score=246.46 Aligned_cols=334 Identities=21% Similarity=0.207 Sum_probs=248.0
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 168 (451)
+..+.....+..+++++|.++|++++|+++||+|||+++++++++..++.+++++++|++.+++.|++.|++.++...+.
T Consensus 113 ~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~ 192 (521)
T KOG0255|consen 113 VCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVG 192 (521)
T ss_pred eeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHh
Confidence 67788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhhcccCchHHHHHhhccc
Q 013044 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKR 248 (451)
Q Consensus 169 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 248 (451)
..++.|++++++|+.+..+ ......+..+++.+++++.. +||+.+++..+++++.++.+++.||+|+|+..++
T Consensus 193 ~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~---~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g--- 265 (521)
T KOG0255|consen 193 FGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR---DWRWLFWIISIPSGLFLLLWFLPPESPRWLLSKG--- 265 (521)
T ss_pred HhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHccCcChHHHHHcC---
Confidence 9999999999999999999 77777777778888887766 8999999999999987777777779999999888
Q ss_pred cCCccchHHHHHHHHHHHhCCCCCCCCchh-HHHH--HHhhcccccccccchhhhhcccchhHHHHHHHHHHHHHhhchh
Q 013044 249 KGDMQDLRESAISCLCRLRGQSIGDSAPTE-VDEI--LTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQP 325 (451)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (451)
+.+++.+.+++..+.+.......+ .+.. .+.......+++..+.++++.+..++..+...+.++..
T Consensus 266 ------~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~----- 334 (521)
T KOG0255|consen 266 ------RIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVF----- 334 (521)
T ss_pred ------chHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHH-----
Confidence 667888887776554322222211 1111 11111112223356788888775454444444444322
Q ss_pred HHHHhH-HHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchH
Q 013044 326 SVLYYA-ASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAV 404 (451)
Q Consensus 326 ~~~~~~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (451)
...+|. +......|. +........+.....+....+...|+.|||.....+..+..+++++.++.... ...++
T Consensus 335 ~~~y~gl~~~~~~lg~----~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 408 (521)
T KOG0255|consen 335 SLVYYGLSLNVSGLGG----NIYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDD--LGGWL 408 (521)
T ss_pred hHHHHhhhhhhhhcCc----hHHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhcc--chhHH
Confidence 122222 222223333 45555666666888888888999999999999999999999988888765432 11123
Q ss_pred HHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheeeee
Q 013044 405 AVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCAKL 449 (451)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (451)
..+...+..++.+. ++... +.+..|++|+..|..+.+.+++.
T Consensus 409 ~~~~~~~~~~~~~~--~~~~~-~~~~~el~pt~~r~~~~~~~~~~ 450 (521)
T KOG0255|consen 409 HWILPLLGKFFIGS--AFNLI-FLYSAELIPTVVRNTAVGAISAA 450 (521)
T ss_pred HHHHHHHHHHHHHH--HHHHH-HHHHHhhccHHHHHHHHHHHHHH
Confidence 33333333334443 33444 88999999999999998877643
|
|
| >PRK15034 nitrate/nitrite transport protein NarU; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.6e-29 Score=229.98 Aligned_cols=303 Identities=12% Similarity=0.080 Sum_probs=212.0
Q ss_pred ccccccccccccccC-CCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHh
Q 013044 66 YDIGSTSCATISIES-PTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA 144 (451)
Q Consensus 66 ~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~ 144 (451)
..-...+++.+.+.+ + +++|++|.+++.+++.+++.++.++.|++.||+|.|+++.++.++..+.+++.+++
T Consensus 48 ~~w~~~~~l~~~~~~~~-------~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a 120 (462)
T PRK15034 48 CVWMLFSAVTVNLNKIG-------FNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIA 120 (462)
T ss_pred HHHHHHHHHHHHhhhhh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence 345566777777755 5 89999999999999999999999999999999999999999999999999999987
Q ss_pred -----hhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhc-----c------
Q 013044 145 -----PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLV-----D------ 208 (451)
Q Consensus 145 -----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~-----~------ 208 (451)
++++.+++.|++.|++ +..++.....+++|+|+++||+++|+.....++|..++++++..+. .
T Consensus 121 ~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~ 199 (462)
T PRK15034 121 VQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNG 199 (462)
T ss_pred HcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 8999999999999998 6689999999999999999999999997777777766655554322 1
Q ss_pred -------cccchhHHHhhhHHHHHHHHHHhhcc-cCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHH
Q 013044 209 -------LVAGWRYMYGASTPLAVIMGMGMWWL-PASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVD 280 (451)
Q Consensus 209 -------~~~~wr~~f~~~~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (451)
.. +||...++..++.++..+..++. ++.|.
T Consensus 200 ~~~~~g~~~-~~~~~~~~~~~~~iv~~i~~~~~~~~~~~----------------------------------------- 237 (462)
T PRK15034 200 VPQADGSVM-SLANAAWIWVPLLAIATIAAWSGMNDIAS----------------------------------------- 237 (462)
T ss_pred ccccccchH-HHHHHHHHHHHHHHHHHHHHHHhCCCccc-----------------------------------------
Confidence 22 58888888888877755444443 33221
Q ss_pred HHHHhhcccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHH
Q 013044 281 EILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIM 360 (451)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 360 (451)
.+.+..+..+.+|++..+...+. .+..+.++..+.++.|++.++ .+ +............+...+.
T Consensus 238 ---------~~~~~~~~~~vlk~~~~Wllsll----y~~tFG~fvg~s~~lp~~~~~-~~-~~~~~l~~~~l~~l~~~l~ 302 (462)
T PRK15034 238 ---------SRASIADQLPVLQRLHLWLLSLL----YLATFGSFIGFSAGFAMLAKT-QF-PDVNILRLAFFGPFIGAIA 302 (462)
T ss_pred ---------cccCHHHHHHHhCCCchhHHHHH----HHHHHHHHHHHHHHHHHHHHH-Hc-ChHHHHHHHHHHHHHHHHH
Confidence 01111234456776654443333 233444555677788888765 34 3344444455567888899
Q ss_pred HHHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhhhcc-CCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhh
Q 013044 361 TGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFL-DDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFE 436 (451)
Q Consensus 361 ~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (451)
++++|+++||+|+++++..+++.+.++...+....... ..+.+...+.++....+.++ +.+.+ +-++.+.+|+
T Consensus 303 rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~--gngsv-fk~ip~~f~~ 376 (462)
T PRK15034 303 RSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGL--GSGST-FQMIAVIFRQ 376 (462)
T ss_pred HHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcc--cchHH-HHhhHHHHhh
Confidence 99999999999999999888877766654432222111 11223333333333344555 33333 3345555553
|
|
| >PRK12382 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-29 Score=235.90 Aligned_cols=310 Identities=17% Similarity=0.125 Sum_probs=216.3
Q ss_pred ccccccccccccc-ccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHH
Q 013044 65 GYDIGSTSCATIS-IESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL 143 (451)
Q Consensus 65 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~ 143 (451)
....+...+.+|. +.++ +|.|..++|++.+++.+++.++++++|+++||+||||+++.+.++..++.+....
T Consensus 28 ~~~~~~~~p~l~~~l~~~-------lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~ 100 (392)
T PRK12382 28 YMTVGLPLPVIPLFVHHD-------LGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLL 100 (392)
T ss_pred HHHHHHHhhhhhHHHHHh-------cCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHh
Confidence 3345566677775 4566 8999999999999999999999999999999999999999998887776553322
Q ss_pred --------hhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhH
Q 013044 144 --------APDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRY 215 (451)
Q Consensus 144 --------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~ 215 (451)
.+|++.++++|+++|++.+...+...+++.|++|+++|++++++.+.+...|..++|++++.+.+.. |||+
T Consensus 101 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~-g~~~ 179 (392)
T PRK12382 101 AAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHF-GFAA 179 (392)
T ss_pred hhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhcc-ChHH
Confidence 3578999999999999999999999999999999999999999999999999999999999998877 9998
Q ss_pred HHhhhHHHHHHHHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhccccccccc
Q 013044 216 MYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEV 295 (451)
Q Consensus 216 ~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (451)
.+.+..+..++........||.++ + + +++.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~-----~--------------------------------------------~-~~~~ 209 (392)
T PRK12382 180 LALTTMVLPLLAWAFNGTVRKVPA-----H--------------------------------------------A-GERP 209 (392)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCC-----C--------------------------------------------c-ccCc
Confidence 877655544333222222232211 0 0 0000
Q ss_pred chhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCch
Q 013044 296 SLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRP 375 (451)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~ 375 (451)
+.++..+.. ++... ...+. ..+......+.+.++++.+. + ..+.......++.+++.++.+++.||+|+|+
T Consensus 210 ~~~~~~~~~-~~~~~-~~~l~----~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~ 280 (392)
T PRK12382 210 SLWSVVGLI-WKPGL-GLALQ----GVGFAVIGTFVSLYFASKGW-A--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVK 280 (392)
T ss_pred hHHHHHHHH-HHhHH-HHHHH----HHHHhHHHHHHHHHHHhcCC-c--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 111111110 01111 11111 11122445566777777666 3 3556666778888999999999999999999
Q ss_pred hhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheeeee
Q 013044 376 LLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCAKL 449 (451)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (451)
.+..+..+..++.+++.. .++.+...+...+.+.+.+. ..+.......+..|++.|+++.++.++.
T Consensus 281 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~g~~~~~---~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 346 (392)
T PRK12382 281 VAIVSLLVETVGLLLLWL-----APTAWVALAGAALTGAGCSL---IFPALGVEVVKRVPSQVRGTALGGYAAF 346 (392)
T ss_pred ehHHHHHHHHHHHHHHHH-----cccHHHHHHHHHHHHHHHHh---HHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 888877777766654432 23344444444555555554 3455555667778999999998876543
|
|
| >PRK15403 multidrug efflux system protein MdtM; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-29 Score=236.30 Aligned_cols=266 Identities=15% Similarity=0.156 Sum_probs=206.9
Q ss_pred HHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHH
Q 013044 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (451)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~ 134 (451)
..+.+..+...++.....+.+|.+.++ ++.+..+.++..+++.++++++++++|+++||+|||++++.+.+++
T Consensus 19 ~~~~~~~~~~~~~~~~~~p~l~~i~~~-------~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 91 (413)
T PRK15403 19 MALILYDFAAYLTTDLIQPGIINVVRD-------FNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIF 91 (413)
T ss_pred HHHHHHHHHHHHHHHhhccCHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHH
Confidence 445666677777888999999999888 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchh
Q 013044 135 LVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWR 214 (451)
Q Consensus 135 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr 214 (451)
+++.+++++++|++.++++|+++|++.+...+....++.|++++++|++++++......+|..+||++++.+.+.. +||
T Consensus 92 ~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~-gw~ 170 (413)
T PRK15403 92 TLACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFV-HWK 170 (413)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHH
Confidence 9999999999999999999999999998777778888999999999999999999999999999999999998876 999
Q ss_pred HHHhhhHHHHHHHHH-HhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhccccccc
Q 013044 215 YMYGASTPLAVIMGM-GMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDK 293 (451)
Q Consensus 215 ~~f~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (451)
+.|++.+++.++..+ ..+.+||+++. + +++.+ .+..
T Consensus 171 ~~f~~~~~~~~i~~~~~~~~lp~~~~~----~-~~~~~--------------------------------------~~~~ 207 (413)
T PRK15403 171 VLFAIIAVMGLIAFVGLLLAMPETVKR----G-AVPFS--------------------------------------AKSV 207 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCccc----c-CCCCC--------------------------------------hHHH
Confidence 999999888777444 34557876430 0 00000 0000
Q ss_pred ccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHc-CCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 013044 294 EVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSA-GFSAASDATRVSILLGLFKLIMTGLAVLVVERLG 372 (451)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g 372 (451)
..+++.+++++..+...+...+. ......+..+.|.++++. |+ +..+.++.......+.+++..+.+.+.++..
T Consensus 208 ~~~~~~ll~~~~~~~~~l~~~~~----~~~~~~~~~~~P~~l~~~~g~-s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~ 282 (413)
T PRK15403 208 LRDFRNVFRNRLFLTGAATLSLS----YIPMMSWVAVSPVILIDAGGM-TTSQFAWTQVPVFGAVIVANAIVARFVKDPT 282 (413)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHH----HHHHHHHHHhChHHHHHhcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 12345666665444433332222 222234555667777655 77 8888999888888888888888887765544
Q ss_pred Cchh
Q 013044 373 RRPL 376 (451)
Q Consensus 373 ~~~~ 376 (451)
+++.
T Consensus 283 ~~~~ 286 (413)
T PRK15403 283 EPRF 286 (413)
T ss_pred chhH
Confidence 4343
|
|
| >TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.4e-29 Score=232.43 Aligned_cols=338 Identities=17% Similarity=0.143 Sum_probs=229.5
Q ss_pred hhhhccccccccccccc-ccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHH
Q 013044 61 GLLYGYDIGSTSCATIS-IESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGAL 139 (451)
Q Consensus 61 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~ 139 (451)
.+..........+.+|. +.++ +|+++.+.+++.+++.+++.+++++.|+++||+|||++++++.++.+++.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~-------~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~ 82 (366)
T TIGR00886 10 FFLSFSVWFAFSPLAVQMIKDD-------LGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCL 82 (366)
T ss_pred HHHHHHHHHHhHHhhhHHHHHH-------hCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 33444455567788885 7777 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhh-hHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhccc---------
Q 013044 140 VTALAP-DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL--------- 209 (451)
Q Consensus 140 ~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~--------- 209 (451)
++++++ +++.+++.|+++|++.+ ..+....+++|++|+++|+++.++.....++|..+++.+++.+...
T Consensus 83 ~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~ 161 (366)
T TIGR00886 83 WAGLAVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPA 161 (366)
T ss_pred HHHHHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 999999 99999999999999966 4566788999999999999999999988888888777777665431
Q ss_pred ccchhHHHh-hhHHHHHH-HHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhc
Q 013044 210 VAGWRYMYG-ASTPLAVI-MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELS 287 (451)
Q Consensus 210 ~~~wr~~f~-~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (451)
..+||+.|+ +.+++..+ ..+...+.+|+|+.. .++++.+. + + . ...
T Consensus 162 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~----~----------~---~-~~~----------- 209 (366)
T TIGR00886 162 HLAWGWAFVIVPAGILLLPALLIFFVGADTPPGK---PATGKLSF----K----------G---A-RWS----------- 209 (366)
T ss_pred cccccchhHHHHHHHHHHHHHHHHHhcccCCccc---ccchhccc----c----------c---c-ccc-----------
Confidence 128999994 44554444 444444556655310 00000000 0 0 0 000
Q ss_pred ccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHH-HcCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 013044 288 YVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQ-SAGFSAASDATRVSILLGLFKLIMTGLAVL 366 (451)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~ 366 (451)
.+++......+.++++..+...+...+.. ........+.+.+++ ..|+ +..+++.......+..++++++.++
T Consensus 210 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~g~ 283 (366)
T TIGR00886 210 -VGTGALGDQLKVFRDRHTWILALLYSVTF----GSFLGVSSIFAMFFKDQFGL-SKVTAGAYASLGGLLGSLARPLGGA 283 (366)
T ss_pred -ccchhHHHHHHHHhccchhhHHHHHHHHH----HHHHHHHHHHHHHHHHHcCC-cHHHHHHHHHHHHHHHHHHhhccch
Confidence 00000113344555544333333222222 223345566777775 4587 8888998999999999999999999
Q ss_pred HhhhcCCchhhhchhHHHHHHHHHHHHhhhccCC-cchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhhe
Q 013044 367 VVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDD-VPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIY 445 (451)
Q Consensus 367 l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (451)
+.||+|+|+.+..+......+..++.... ..+ +.+...+...+.....+. ..+..+.+..+..| +.++++.|+
T Consensus 284 l~~r~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~-~~~g~~~g~ 357 (366)
T TIGR00886 284 ISDRLGGARKLLMSFLGVAMGAFLVVLGL--VSPLSLAVFIVLFVALFFFSGA---GNGSTFALVPHIFR-RATGAVSGL 357 (366)
T ss_pred HHHhhccchhHHHHHHHHHHHHHHHHhcC--CCcchHHHHHHHHHHHHHHhcc---ccchhhhcchhhch-hhcccHHHH
Confidence 99999998877766665555544443221 111 333333444444455554 23445566777776 589998888
Q ss_pred eeeec
Q 013044 446 CAKLR 450 (451)
Q Consensus 446 ~~~~~ 450 (451)
.++++
T Consensus 358 ~~~~~ 362 (366)
T TIGR00886 358 VGAIG 362 (366)
T ss_pred HHHhc
Confidence 76653
|
|
| >PRK05122 major facilitator superfamily transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-29 Score=238.10 Aligned_cols=317 Identities=18% Similarity=0.153 Sum_probs=223.7
Q ss_pred HHHhhhhhccccccccccccc-ccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHH
Q 013044 57 PALGGLLYGYDIGSTSCATIS-IESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYL 135 (451)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~ 135 (451)
+.+..+...++..+..+.+|. +.++ +|.|+.+.|++.+++.+++.+++++.|+++||+|||++++.+.++.+
T Consensus 20 l~~~~~~~~~~~~~~~~~l~~~i~~~-------~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~ 92 (399)
T PRK05122 20 IVMFTFISYLTIGLPLAVLPGYVHDQ-------LGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCA 92 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-------cCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHH
Confidence 334445555566677778886 5566 89999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHh--------hhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhc
Q 013044 136 VGALVTALA--------PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLV 207 (451)
Q Consensus 136 ~~~~~~~~~--------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~ 207 (451)
++.+.+.++ .+++.+++.|+++|++.+...+...+++.|++|+++|++++++.+.+..+|.++|+.+++.+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~ 172 (399)
T PRK05122 93 LSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLY 172 (399)
T ss_pred HHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHH
Confidence 877766553 257789999999999999999999999999999999999999999999999999999999998
Q ss_pred ccccchhHHHhhhHHHHHHHHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhc
Q 013044 208 DLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELS 287 (451)
Q Consensus 208 ~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (451)
+.. +||+.+++.++..++..+.....|++++ +
T Consensus 173 ~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~------------------------------------------ 204 (399)
T PRK05122 173 HWG-GLAGLGLLIMLLALLGLLLARPRPAVPP-----V------------------------------------------ 204 (399)
T ss_pred Hcc-cHHHHHHHHHHHHHHHHHHHhcCCCCCC-----C------------------------------------------
Confidence 887 9999988776665543333222222211 0
Q ss_pred ccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 013044 288 YVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLV 367 (451)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l 367 (451)
++++.++++.+++. +.......+..+ .+.....+.+.++++.+. .+.+.......++.+++.++.+++
T Consensus 205 ---~~~~~~~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~l 272 (399)
T PRK05122 205 ---KGERLPFRRVLGRV--WPYGMGLALASI----GFGTIATFITLYYAARGW---DGAALALTLFGVAFVGARLLFGNL 272 (399)
T ss_pred ---CccchhHHHHHHHH--HHHHHHHHHHHH----HHHHHHHHHHHHHHHccc---ccchHHHHHHHHHHHHHHHHHHHH
Confidence 00000111222211 111111111111 122344566666666665 345566677888899999999999
Q ss_pred hhhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheee
Q 013044 368 VERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCA 447 (451)
Q Consensus 368 ~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (451)
.||+++|+.+..+..+..++..++.. .++.+..++..++.+.+.+. ..+.......+..|++.|+++.++.+
T Consensus 273 ~~r~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~G~~~~~---~~~~~~~~~~~~~~~~~~g~~~g~~~ 344 (399)
T PRK05122 273 INRLGGLRVAIVSLLVEILGLLLLWL-----APSPWMALIGAALTGFGFSL---VFPALGVEAVKRVPPQNRGAALGAYS 344 (399)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHH-----hccHHHHHHHHHHHHHhHHH---HHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 99999999888777776666655443 23344444444555555554 34444445567788999999988754
Q ss_pred e
Q 013044 448 K 448 (451)
Q Consensus 448 ~ 448 (451)
.
T Consensus 345 ~ 345 (399)
T PRK05122 345 V 345 (399)
T ss_pred H
Confidence 3
|
|
| >PRK03699 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.5e-29 Score=233.65 Aligned_cols=315 Identities=15% Similarity=0.116 Sum_probs=226.4
Q ss_pred HHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHH
Q 013044 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (451)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~ 134 (451)
...+++.+..+.+....++.+|.+.++ +|+|+++.+++.+.+.+++.+++++.|++.||+|||+++..+.++.
T Consensus 10 ~~~~~~~~~~~~~~~~~g~~~~~i~~~-------~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~ 82 (394)
T PRK03699 10 WISFLSYALTGALVIVTGMVMGPIAEY-------FNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALM 82 (394)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 344556677777788889999999988 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchh
Q 013044 135 LVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWR 214 (451)
Q Consensus 135 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr 214 (451)
+++.++++++++++.++++|+++|++.+...+...+++.|++|+++|+++++..+....+|..++|.+.+.+.....+||
T Consensus 83 ~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~ 162 (394)
T PRK03699 83 ILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWY 162 (394)
T ss_pred HHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888765333999
Q ss_pred HHHhhhHHHHHHHHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccc
Q 013044 215 YMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKE 294 (451)
Q Consensus 215 ~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (451)
+.|.+.+++.++..+..++ ++.|+. .++ + + ++ .++..+
T Consensus 163 ~~f~~~~~~~~~~~~~~~~-~~~p~~--~~~---~-----~----------------~~---------------~~~~~~ 200 (394)
T PRK03699 163 WVYACIGLVYVAIFILTLF-SEFPAL--GKH---A-----P----------------KA---------------DKPVAK 200 (394)
T ss_pred HHHHHHHHHHHHHHHHHHh-cCCccc--ccc---C-----c----------------cc---------------cCcccc
Confidence 9999888877664443333 222210 000 0 0 00 000000
Q ss_pred cchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHH-HcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 013044 295 VSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQ-SAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGR 373 (451)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~ 373 (451)
+.+ + +..+ ...+..+........+..|.|.+++ ..|+ +..+++.......++.++++++.+++.||+++
T Consensus 201 ----~~~-~---~~~~-~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~-s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~ 270 (394)
T PRK03699 201 ----EKW-G---IGVL-FLAIAALLYILAQLTFISWVPEYAQKKFGM-SLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDL 270 (394)
T ss_pred ----ccC-C---hHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ChHHhhHHHHHHHHHHHHHHHHHHHHHHHhch
Confidence 001 1 1121 1222222222334456678888885 5688 88899999999999999999999999999999
Q ss_pred chhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhh
Q 013044 374 RPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFE 436 (451)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (451)
|+.+.....+..+...++.. .++.+...+..++.+.+.+. ..+.......+..|+
T Consensus 271 ~~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~G~~~~~---~~~~~~~~~~~~~~~ 325 (394)
T PRK03699 271 QRILTVLAGLALVLMYLFVN-----TDDPSHLLYAILGLGFFSSA---IYTTIITLGSQQTKV 325 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHH-----cCCchHHHHHHHHHHHHHHH---HHHHHHHHHHHHccC
Confidence 98887666555544333321 23333333334444443332 344444444454443
|
|
| >PRK11043 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-29 Score=236.08 Aligned_cols=321 Identities=14% Similarity=0.117 Sum_probs=233.3
Q ss_pred cccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHh
Q 013044 65 GYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA 144 (451)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~ 144 (451)
.+....+.|.+|.+.++ ++.++++.+++.+++.++..++++++|+++||+|||+++..+.++.+++.+++.++
T Consensus 19 ~~~~~~~~p~~~~i~~~-------~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 91 (401)
T PRK11043 19 FLATDMYLPAFKAIQAD-------LQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWV 91 (401)
T ss_pred HHHHHHHHhhHHHHHHH-------HCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHh
Confidence 34556777888888877 89999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHH
Q 013044 145 PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLA 224 (451)
Q Consensus 145 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~ 224 (451)
++++.+++.|+++|++.+...+...+++.|+++++++++..+.......+|..++|.+++.+.+.. +||+.|++.+++.
T Consensus 92 ~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~-g~~~~~~~~~~~~ 170 (401)
T PRK11043 92 ESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHF-GWQAIFATLFAIT 170 (401)
T ss_pred cCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ChHHHHHHHHHHH
Confidence 999999999999999998888888899999999999999999999999999999999999999887 9999999988887
Q ss_pred HHHHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhccc
Q 013044 225 VIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGK 304 (451)
Q Consensus 225 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (451)
++..+..++++|+++. + + +++++.+++++++++
T Consensus 171 ~~~~~~~~~~~~~~~~----~-----------~--------------------------------~~~~~~~~~~~~~~~ 203 (401)
T PRK11043 171 LLLILPTLRLKPSKKA----R-----------K--------------------------------QSQDALTFKQLLKSK 203 (401)
T ss_pred HHHHHHHHHcCCCCCc----c-----------c--------------------------------cchHHHHHHHHHcCh
Confidence 7755555555554320 0 0 000112344555554
Q ss_pred chhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHH
Q 013044 305 CLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGI 384 (451)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 384 (451)
..+...+...... ........+.|.++++.|+ +..+.+.......++.+++.++.+++.||+++|+.........
T Consensus 204 ~~~~~~~~~~~~~----~~~~~~~~~~p~~~~~~g~-s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~ 278 (401)
T PRK11043 204 TYLGNVLIFAACS----AAFFAWLTGSPFILEQMGY-SPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLF 278 (401)
T ss_pred hHHHHHHHHHHHH----HHHHHHHHHhHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 3333222221111 1223445567888888888 8888888888888899999999999999999888765554444
Q ss_pred HHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheeeee
Q 013044 385 VISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCAKL 449 (451)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (451)
.++...+........+..+...+...+.+.+.+. ..+.......+..| +.++.+.++.+++
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~g~~~g~~~~~ 339 (401)
T PRK11043 279 AVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGA---IYPIVVAQALRPFP-QATGKAAALQNTL 339 (401)
T ss_pred HHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHH---HHHHHHHHHhhhCc-ccChHHHHHHHHH
Confidence 4443332222111122333333334444444444 44544444445455 4688888876654
|
|
| >TIGR00712 glpT glycerol-3-phosphate transporter | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-29 Score=238.54 Aligned_cols=359 Identities=15% Similarity=0.046 Sum_probs=231.7
Q ss_pred HHHHHHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHH
Q 013044 51 ILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILA 130 (451)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~ 130 (451)
+..+....+.......+........|.+.+ +|+++++.+++.+++.++..+++++.|+++||+|||+++..+
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--------~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~ 97 (438)
T TIGR00712 26 WQVFLGIFFGYAAYYLVRKNFALAMPYLVE--------QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAG 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHhccHHhhhHHHHH--------cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHH
Confidence 444455555666666666666666777664 589999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHh----hhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhh
Q 013044 131 ALLYLVGALVTALA----PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLL 206 (451)
Q Consensus 131 ~~l~~~~~~~~~~~----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l 206 (451)
.++.+++.++.++. ++++.+.+.|++.|++.+...+.....+.|++|+++|++++++.+.+..+|..+++.+.+..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~ 177 (438)
T TIGR00712 98 LILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLG 177 (438)
T ss_pred HHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHH
Confidence 99999998887764 46788889999999999999999999999999999999999999999999999998887765
Q ss_pred cccccchhHHHhhhHHHHHH-HHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHh
Q 013044 207 VDLVAGWRYMYGASTPLAVI-MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTE 285 (451)
Q Consensus 207 ~~~~~~wr~~f~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (451)
.+...+||+.|++.++++++ .++..+++||+|+....++ . ++. +++...+..+ +
T Consensus 178 ~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~----~------~~~-------~~~~~~~~~~--------~ 232 (438)
T TIGR00712 178 MAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPP----I------EEY-------RNDYPDDYNE--------K 232 (438)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCC----c------hhc-------cccccccccc--------c
Confidence 44323899999999888777 4455666788765311000 0 000 0000000000 0
Q ss_pred hcccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHH-cCCCCchhHHHHHHHHHHHHHHHHHHH
Q 013044 286 LSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKLIMTGLA 364 (451)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~ 364 (451)
.+.+.+.++...+.+++++..+...+...+. ....+....|.|.++++ .|+ +..+++....+..+.++++.++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~p~~l~~~~g~-s~~~~~~~~~~~~~~~~ig~~~~ 307 (438)
T TIGR00712 233 AEQELTAKEIFMQYVLPNKLLWYIAIANVFV----YLLRYGVLDWSPTYLKEVKHF-ALDKSSWAYFLYEYAGIPGTLLC 307 (438)
T ss_pred cccccchHHHHHHHHccCchHHHHHHHHHHH----HHHHHHHHHhHHHHHHHccCC-ChhhHHHHHHHHHHHHHHHHHHH
Confidence 0000000000112345554444333322222 22234566788888876 477 88889999999999999999999
Q ss_pred HHHhhhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhh
Q 013044 365 VLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSI 444 (451)
Q Consensus 365 g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (451)
+++.||+++++....+.....+..............+.+.....++. .++... +..........|.+|++.|+++.|
T Consensus 308 g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~-~~~~~~~~~~~~~~~~~~~g~~~g 384 (438)
T TIGR00712 308 GWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIV--IGFLIY-GPVMLIGLHALELAPKKAAGTAAG 384 (438)
T ss_pred HHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHH--HHHHHc-cHHHHHHHHHHHhcChhheeeehh
Confidence 99999996543222222222221111111111111222322222222 222220 111122235678889999999999
Q ss_pred eeeeec
Q 013044 445 YCAKLR 450 (451)
Q Consensus 445 ~~~~~~ 450 (451)
+.+..+
T Consensus 385 ~~~~~~ 390 (438)
T TIGR00712 385 FTGLFG 390 (438)
T ss_pred hhchHH
Confidence 887653
|
This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar. |
| >PRK10133 L-fucose transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-28 Score=233.82 Aligned_cols=330 Identities=16% Similarity=0.127 Sum_probs=231.3
Q ss_pred HHHHHHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHH
Q 013044 51 ILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILA 130 (451)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~ 130 (451)
...++.+.+..+..++.....++..|.++++ +++++.+.|++.+.+.+++.+++++.|++.||+|||+++.++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~-------~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g 97 (438)
T PRK10133 25 IIPFALLCSLFFLWAVANNLNDILLPQFQQA-------FTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITG 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 3344555566677788888889999999887 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH---HHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhc
Q 013044 131 ALLYLVGALVT---ALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLV 207 (451)
Q Consensus 131 ~~l~~~~~~~~---~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~ 207 (451)
..++.++.+++ .++++++.++++|+++|+|.|...+...+++.|+.++++|...+++.+..+.+|..+++.+++.+.
T Consensus 98 ~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 98 LFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999886 468899999999999999999999999999999877777777899999999999999999987643
Q ss_pred c-c-----------------c-------cchhHHHhhhHHH-HHHHHHH-hhcccCchHHHHHhhccccCCccchHHHHH
Q 013044 208 D-L-----------------V-------AGWRYMYGASTPL-AVIMGMG-MWWLPASPRWLLLCAMKRKGDMQDLRESAI 260 (451)
Q Consensus 208 ~-~-----------------~-------~~wr~~f~~~~~~-~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 260 (451)
. . . .+||++|+....+ .++..+. ....||.+.. +. .+
T Consensus 178 ~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~---~~----~~--------- 241 (438)
T PRK10133 178 LSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSD---NH----SD--------- 241 (438)
T ss_pred hcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc---cc----cc---------
Confidence 1 0 0 1566666543333 3232222 2233432210 00 00
Q ss_pred HHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHH-HH-Hc
Q 013044 261 SCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASI-LQ-SA 338 (451)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~ 338 (451)
....+...+.+++++++..+...+..++... .......|.+.+ .+ ..
T Consensus 242 ---------------------------~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~l~~~~~ 290 (438)
T PRK10133 242 ---------------------------AKQGSFSASLSRLARIRHWRWAVLAQFCYVG----AQTACWSYLIRYAVEEIP 290 (438)
T ss_pred ---------------------------ccccchhhhHHHHHhCchHHHHHHHHHHHHH----HHHHHHHHHHHHHhhhcC
Confidence 0000011224466676655544333322222 222333455555 44 45
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhcc
Q 013044 339 GFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQV 418 (451)
Q Consensus 339 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (451)
|+ ++.+++.......++.++++++.+++.||+++|+.+..+..+..+.+.+... . ... .....+.+.+.+.+.
T Consensus 291 g~-s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~---~--~~~-~~~~~~~l~glg~~~ 363 (438)
T PRK10133 291 GM-TAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAF---A--GGH-VGLIALTLCSAFMSI 363 (438)
T ss_pred CC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH---c--CCh-HHHHHHHHHHHHHHH
Confidence 88 9999999999999999999999999999999999888776665554443322 1 112 233445556666665
Q ss_pred ccCCCceeeeeeecchhhhhhhhhhhe
Q 013044 419 IKNFNPSKIYHFRIFFFEMTRIVCSIY 445 (451)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (451)
..|..+....+..|++ .+++.++
T Consensus 364 ---i~P~~~s~a~~~~~~~-~~~as~l 386 (438)
T PRK10133 364 ---QYPTIFSLGIKNLGQD-TKYGSSF 386 (438)
T ss_pred ---HHHHHHHHHHcccchh-hccchhH
Confidence 5777777777766654 4444443
|
|
| >PRK03633 putative MFS family transporter protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-28 Score=226.46 Aligned_cols=314 Identities=16% Similarity=0.120 Sum_probs=224.0
Q ss_pred HHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHH
Q 013044 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (451)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~ 134 (451)
..+.++.++.+...+..++.+|.+.++ +|.|..++|++.+.+.++..+++++.|+++||+|||+++..+.++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~lp~~~~~-------~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~ 81 (381)
T PRK03633 9 LLLLCGLLLLTLAIAVLNTLVPLWLAQ-------EHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIF 81 (381)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 344566677788888999999999988 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchh
Q 013044 135 LVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWR 214 (451)
Q Consensus 135 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr 214 (451)
+++.+++++++|++.++++|+++|++.+...+...+.+.+..++++|++++++...+.++|..+|+.+++.+.+.. .|+
T Consensus 82 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~~~ 160 (381)
T PRK03633 82 AAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTEL-MSV 160 (381)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-cch
Confidence 9999999999999999999999999999999988888889999999999999999999999999999999987653 333
Q ss_pred HHHhhhHHHHHH-HHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhccccccc
Q 013044 215 YMYGASTPLAVI-MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDK 293 (451)
Q Consensus 215 ~~f~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (451)
..+. .+..... ..+.....++++. ++++
T Consensus 161 ~~~~-~~~~~~~~~~~~~~~~~~~~~--------------------------------------------------~~~~ 189 (381)
T PRK03633 161 LPWV-TGLVLAAILPLLFTRILNQQA--------------------------------------------------ENHD 189 (381)
T ss_pred HHHH-HHHHHHHHHHHHHhcccCCCC--------------------------------------------------CCCC
Confidence 3322 2222221 1111111111100 0001
Q ss_pred ccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 013044 294 EVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGR 373 (451)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~ 373 (451)
+.+.++.++++..+........... .......+.|.++++.|. +....+.......++.+++++..+++.||+++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~lp~~~~~~g~-s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~ 264 (381)
T PRK03633 190 STSIWPMLKLRQARLGVNGCIISGI----VLGSLYGLMPLYLNHQGM-SDASIGFWMALLVSAGILGQWPIGRLADRFGR 264 (381)
T ss_pred CCCHHHHHHhcchHHHHHHHHHHHH----HHHHHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCc
Confidence 1223445555543332221211111 123444567888888888 88888888899999999999999999999999
Q ss_pred chhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhh
Q 013044 374 RPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCS 443 (451)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (451)
|+.+..+.....++...+. .. ........+++.+.. ...|.......|..|++.++...
T Consensus 265 ~~~l~~~~~~~~~~~~~~~-------~~-~~~~~~~~l~g~~~~---~~~p~~~~~~~~~~~~~~~~~~~ 323 (381)
T PRK03633 265 LLVLRVQVFVVILGSIAML-------SQ-AAMAPALFILGAAGF---TLYPVAMAWACEKVEHHELVAMN 323 (381)
T ss_pred HHHHHHHHHHHHHHHHHHh-------hh-HHHHHHHHHHHHHHH---hHHHHHHHHHHccCCHHHHHHHH
Confidence 9988777666666544321 11 111222223333222 24566666666767766555443
|
|
| >PRK11102 bicyclomycin/multidrug efflux system; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.4e-29 Score=232.55 Aligned_cols=324 Identities=18% Similarity=0.212 Sum_probs=230.5
Q ss_pred cccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhh
Q 013044 67 DIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPD 146 (451)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~ 146 (451)
......|.+|.+.++ +|+++.+.+++.+++.++..++.+++|+++||+|||+++..+.++.+++.+++.++++
T Consensus 6 ~~~~~~p~~~~~~~~-------~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~ 78 (377)
T PRK11102 6 AIDMYLPALPVIAAD-------FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQT 78 (377)
T ss_pred HHHHHhccHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHcc
Confidence 344566888888888 8999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHH
Q 013044 147 FIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (451)
Q Consensus 147 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~ 226 (451)
++.+++.|++.|++.+...+...+++.|++|+++|++++++......+|..++|.+++.+.+.. +||+.|++.+++.++
T Consensus 79 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~ 157 (377)
T PRK11102 79 IDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWF-SWHAIFWVLALAAIL 157 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-ChHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999998876 999999998888777
Q ss_pred H-HHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhcccc
Q 013044 227 M-GMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKC 305 (451)
Q Consensus 227 ~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (451)
. ++..+++||+++. + ++.+. +. ++...+.++.++++.
T Consensus 158 ~~~~~~~~~~~~~~~----~--~~~~~-------------------------~~-----------~~~~~~~~~~~~~~~ 195 (377)
T PRK11102 158 AAALVFFFIPETLPK----E--RRQPF-------------------------HL-----------RTTIRNFASLFRHKR 195 (377)
T ss_pred HHHHHHHhCCccCcc----c--ccCCC-------------------------Ch-----------HHHHHHHHHHHcChH
Confidence 4 4445566765320 0 00000 00 000112334555543
Q ss_pred hhHHHHHHHHHHHHHhhchhHHHHhHHHHH-HHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHH
Q 013044 306 LKALIIGAGLVLFQQITGQPSVLYYAASIL-QSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGI 384 (451)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 384 (451)
.....+. .+....+......+.|.++ +..|+ ++.+.+.......++.+++.++.+++.||+|+|+.+..+..+.
T Consensus 196 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~-s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~ 270 (377)
T PRK11102 196 VLGYMLA----SGFSFAGMFSFLTAGPFVYIELNGV-SPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQ 270 (377)
T ss_pred HHHHHHH----HHHHHHHHHHHHHcCHHHHHHHhCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 2222222 1122222333344445444 45688 8899999999999999999999999999999999888776654
Q ss_pred HHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheeeeec
Q 013044 385 VISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCAKLR 450 (451)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (451)
.+..+.+..... .....+...+...++....+. ..+.......+..| +.++.+.++.+..+
T Consensus 271 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~g~~~~~~~~~~ 331 (377)
T PRK11102 271 FIMGIWLVVSAL-LDLGFWALVVGVAAFVGCVSM---ISSNAMAVILDEFP-HMAGTASSLAGTLR 331 (377)
T ss_pred HHHHHHHHHHHH-HhhhHHHHHHHHHHHHHHHHH---hhHHHHHHHhcccc-ccchHHHHHHHHHH
Confidence 433222221111 112233333333333333333 22333344455555 67788777765543
|
|
| >TIGR00883 2A0106 metabolite-proton symporter | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.6e-28 Score=229.76 Aligned_cols=327 Identities=20% Similarity=0.228 Sum_probs=222.6
Q ss_pred hcccccccccccccccCCCCCCcccccCCchhHHHHHHH-----HHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHH
Q 013044 64 YGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSG-----SLYGALIGSILAFNIADILGRRRELILAALLYLVGA 138 (451)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~-----~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~ 138 (451)
+.++...++...+.+.++.. .+.++.+.+.+.+. ..++..+++++.|+++||+|||++++++.++..++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~ 79 (394)
T TIGR00883 5 EWFDFYLYGFAAVLVFHTFF-----PPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGT 79 (394)
T ss_pred hHHHHHHHHHHHHHHHHHhc-----CCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHH
Confidence 34444445555555544411 23455666655443 334445789999999999999999999999999999
Q ss_pred HHHHHhhhHH--------HHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhc---
Q 013044 139 LVTALAPDFI--------IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLV--- 207 (451)
Q Consensus 139 ~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~--- 207 (451)
++++++++++ .++++|+++|++.+...+...+++.|++++++|++..++...+..+|.++++.++..+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~ 159 (394)
T TIGR00883 80 LLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLL 159 (394)
T ss_pred HHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999998875 48899999999999999999999999999999999999999999999999999877654
Q ss_pred -----ccccchhHHHhhhHHHHHHHHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHH
Q 013044 208 -----DLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEI 282 (451)
Q Consensus 208 -----~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (451)
+.. +||+.|++.+++.++..+.....||++++..+++
T Consensus 160 ~~~~~~~~-~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------- 201 (394)
T TIGR00883 160 GDDALLEW-GWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQE------------------------------------- 201 (394)
T ss_pred CHHHhhcc-chHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHh-------------------------------------
Confidence 234 8999999887776665555556677664321110
Q ss_pred HHhhcccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHH-HHcCCCCchhHHHHHHHHHHHHHHHH
Q 013044 283 LTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASIL-QSAGFSAASDATRVSILLGLFKLIMT 361 (451)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~~~~~~ 361 (451)
++++.+.+.++.++++. ++....... .+...........+.|.++ ++.|. +..+.+.......++.+++.
T Consensus 202 ------~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~ 272 (394)
T TIGR00883 202 ------KHKKKRGPIRETLTKHR-KPFLLGLGL-VIATTTTFYLITTYLPTYLTQTLGL-SANSALLVLMLSLILFFITI 272 (394)
T ss_pred ------ccccccCCHHHHHHhch-HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHH
Confidence 01111223445555432 122222222 2222333445666778887 45677 78888889999999999999
Q ss_pred HHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhh
Q 013044 362 GLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIV 441 (451)
Q Consensus 362 ~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (451)
++.+++.||+|||+.+.....+..+....+... .....+.+......++.+.+.+. ..+....+..|.+|++.|++
T Consensus 273 ~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~p~~~~~~ 348 (394)
T TIGR00883 273 PLSGALSDRIGRRPVLIIFTVLAALLAVPLLMA-LLDSGSFTLFFFLVLGLALIGGM---YTGPMGSFLPELFPTEVRYT 348 (394)
T ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHH-HhcCCchHHHHHHHHHHHHHHHH---HhhhHHHHHHHhCCccceee
Confidence 999999999999987765444333322111111 11123334444444444555544 45566788899999999998
Q ss_pred hhhee
Q 013044 442 CSIYC 446 (451)
Q Consensus 442 ~~~~~ 446 (451)
+.++.
T Consensus 349 ~~~~~ 353 (394)
T TIGR00883 349 GASLA 353 (394)
T ss_pred Eeeeh
Confidence 87764
|
This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc. |
| >KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-29 Score=223.93 Aligned_cols=381 Identities=17% Similarity=0.184 Sum_probs=264.5
Q ss_pred HHHHHHHHHHHhhhhhcccccccccccccccCCCCCCccc-ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHH
Q 013044 49 AAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISW-YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRREL 127 (451)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~ 127 (451)
+.+..+.+...+.+.++||..+++.+.|-+....+..++. =+.++...+.+..+..+|.++||++.|+++||+|||+++
T Consensus 38 ~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vY 117 (538)
T KOG0252|consen 38 KHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVY 117 (538)
T ss_pred HHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhh
Confidence 3444447778899999999999999888776543332210 124667788999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhh-------HHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHH
Q 013044 128 ILAALLYLVGALVTALAPD-------FIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGY 200 (451)
Q Consensus 128 ~~~~~l~~~~~~~~~~~~~-------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~ 200 (451)
...+++..+++++++++.. .+++...|++.|+|.|+-+|...+..+|....++||...+...+..+.|...|.
T Consensus 118 G~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ 197 (538)
T KOG0252|consen 118 GKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGG 197 (538)
T ss_pred hHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhcc
Confidence 9999999999998887532 578899999999999999999999999999999999999988888888877777
Q ss_pred HHhhhhcc----cc----------cchhHHHhhhHHHHHHHHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHH
Q 013044 201 GIGSLLVD----LV----------AGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRL 266 (451)
Q Consensus 201 ~l~~~l~~----~~----------~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (451)
+++-.+.. .. .=||..+.+.+++.+......+..||++++.....++ .+.+.+..++.
T Consensus 198 ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~--------~~~a~~d~~k~ 269 (538)
T KOG0252|consen 198 IVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKK--------LKQAAGDMKKV 269 (538)
T ss_pred HHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcC--------Hhhhhhccccc
Confidence 77665542 11 1399999999999998888888899999876332211 11111111100
Q ss_pred hCCCCCCCCchhHHHHHH--hhcccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCch
Q 013044 267 RGQSIGDSAPTEVDEILT--ELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAAS 344 (451)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 344 (451)
.. . ++++... ......+.....+...+..++ -+.++..+..+|..-..++..+.+...+++..|+....
T Consensus 270 ~~---~-----~~~~~~~~~~~~~~~~~~~~~F~~~f~~~h-g~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~ 340 (538)
T KOG0252|consen 270 LS---V-----DIEAESTAESDVPPPSNSFGLFSRLFLRWH-GKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSA 340 (538)
T ss_pred cc---c-----ccchhhccccCCCCcccccchHHHHHHHHH-HHHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCc
Confidence 00 0 0000000 000001111112333333332 24455566666666666777888888888887773332
Q ss_pred hHH--------HHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhh
Q 013044 345 DAT--------RVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCY 416 (451)
Q Consensus 345 ~~~--------~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (451)
+.. ....+...+.++|..+...++|++|||+..+.|+.++.+..+.++..+.... +.....+...+..++.
T Consensus 341 ~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~-~~~Gf~v~y~l~~ff~ 419 (538)
T KOG0252|consen 341 NTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLE-NTIGFVVLYSLTFFFG 419 (538)
T ss_pred chHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCccccc-ccCceeehHHHHHHHH
Confidence 222 1223333444557777778999999999999999999998888776543211 2333344444444555
Q ss_pred ccccCCCceeeeeeecchhhhhhhhhhheeeee
Q 013044 417 QVIKNFNPSKIYHFRIFFFEMTRIVCSIYCAKL 449 (451)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (451)
.+ +.......+.+|.+|.+.|+++.|++++.
T Consensus 420 NF--GPn~ttfivpaE~FParvR~t~hGIsAA~ 450 (538)
T KOG0252|consen 420 NF--GPNATTFIVPAEIFPARVRSTCHGISAAS 450 (538)
T ss_pred hc--CCCceeEEeehhhchHHHhhhhhhHHHHh
Confidence 55 66777888999999999999999998764
|
|
| >KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.7e-28 Score=226.80 Aligned_cols=302 Identities=17% Similarity=0.167 Sum_probs=228.2
Q ss_pred CccchHHHHHHHHHHHhhhhhcccccccc-cccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 013044 44 NYSVSAAILPFLFPALGGLLYGYDIGSTS-CATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILG 122 (451)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G 122 (451)
+..+|..+.++..++..++....+...++ +.+-.+.+| .+....+.+.+.++++++++++++++|.+.||++
T Consensus 37 ~l~~K~dl~i~~~~~~~y~~~~~d~~si~~a~l~g~~ed-------l~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ 109 (495)
T KOG2533|consen 37 KLLRKLDLFILPFLCYLYFHAYLDKSSIVNASLSGLKED-------LKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFP 109 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcchhcchhHHHcCCccc-------cchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCC
Confidence 33455566666677777777777755433 333334555 7889999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHH
Q 013044 123 RRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGI 202 (451)
Q Consensus 123 rr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l 202 (451)
..+.+....+++++..++....+|++.+++.|++.|+.++..+|....+++.|+.+++|+..++++.+..++|.++|.++
T Consensus 110 ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggli 189 (495)
T KOG2533|consen 110 LSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLI 189 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHH
Confidence 99999999999999999998899999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcc-----cccchhHHHhhhHHHHHH-HHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCc
Q 013044 203 GSLLVD-----LVAGWRYMYGASTPLAVI-MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAP 276 (451)
Q Consensus 203 ~~~l~~-----~~~~wr~~f~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (451)
+..+.+ ...||||.|++.++++++ .+++.+++|+.|....- ...+|.+-..++.+......
T Consensus 190 A~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~f----------l~~~ek~~~~~~~~~~~~~~--- 256 (495)
T KOG2533|consen 190 AYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWF----------LTDEEKELVVERLRESPSGG--- 256 (495)
T ss_pred HHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhccc----------cchHHHHHHHHHHHhccCCC---
Confidence 998632 123999999999999998 55667778999861100 01111111111111111100
Q ss_pred hhHHHHHHhhcccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHH-cCCCCchhHHHHHHHHHH
Q 013044 277 TEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGL 355 (451)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~ 355 (451)
..++.++..+++.++++..+...+ ..++.....+.+.+|+|.++.+ .|+ +..++..+.++..+
T Consensus 257 -----------~~~~~~~~~~~~a~~dp~vw~~~l----~~~~~~lv~~~~~~~lpl~l~~~~~~-s~~~a~~ls~~~~~ 320 (495)
T KOG2533|consen 257 -----------IENKFKWKGFKEALKDPGVWPFSL----CYFFLKLVNYGFSYWLPLYLKSNGGY-SELQANLLSTPYDV 320 (495)
T ss_pred -----------cccccCHHHHHHHHhchhHHHHHH----HHHHHhhccccHHHHHHHHHHcCCCc-ChHHhccccchHHh
Confidence 001133455667777655444443 3444444556788999999988 457 89999999999999
Q ss_pred HHHHHHHHHHHHhhh----cCCchhhhchh
Q 013044 356 FKLIMTGLAVLVVER----LGRRPLLLGGV 381 (451)
Q Consensus 356 ~~~~~~~~~g~l~d~----~g~~~~~~~~~ 381 (451)
+++++.+++|+++|| ..+|.......
T Consensus 321 ~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~ 350 (495)
T KOG2533|consen 321 GGIVGLILAGYLSDRLKTIFARRLLFIVFL 350 (495)
T ss_pred hhHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 999999999999999 44555444433
|
|
| >TIGR00885 fucP L-fucose:H+ symporter permease | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.5e-28 Score=226.97 Aligned_cols=327 Identities=16% Similarity=0.108 Sum_probs=237.1
Q ss_pred HHHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHH
Q 013044 54 FLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALL 133 (451)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l 133 (451)
+..+++..+..|+..+..++.+|.++++ +|+++.+.|++.+.+.+++.+++++.|++.||+|||++++++.++
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~-------~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l 77 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQA-------FTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFL 77 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHH
Confidence 3455677788888888889999999988 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH---hhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhccc-
Q 013044 134 YLVGALVTAL---APDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL- 209 (451)
Q Consensus 134 ~~~~~~~~~~---~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~- 209 (451)
++++.+++.. .++++.+++.|++.|+|.|...+....++.+..|+++|++.+++.+...++|..++|.+++.+...
T Consensus 78 ~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~ 157 (410)
T TIGR00885 78 YALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSN 157 (410)
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999988654 468999999999999999999999999999999999999999999999999999999999877422
Q ss_pred ------------------------ccchhHHHhhhHHHHHHHHHHhhcc--cCchHHHHHhhccccCCccchHHHHHHHH
Q 013044 210 ------------------------VAGWRYMYGASTPLAVIMGMGMWWL--PASPRWLLLCAMKRKGDMQDLRESAISCL 263 (451)
Q Consensus 210 ------------------------~~~wr~~f~~~~~~~~~~~~~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (451)
..+||++|++.+++.++..+...+. ||.++ + ++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~-----~-----------~~----- 216 (410)
T TIGR00885 158 LPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNH-----S-----------DA----- 216 (410)
T ss_pred CccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-----c-----------cc-----
Confidence 1259999998888777644443332 32110 0 00
Q ss_pred HHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCC-CC
Q 013044 264 CRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGF-SA 342 (451)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s 342 (451)
++.....+.+++++++..+...+..+++...+ .....|.+.+.++.+. .+
T Consensus 217 -------------------------~~~~~~~~~~~~~~~~~~~~~~l~~f~yvg~e----~~~~s~l~~y~~~~~~~~~ 267 (410)
T TIGR00885 217 -------------------------KQISFSASLSRLARIRHYREGVIAQFFYVGVQ----IMCWTFIIQYAVRLIPGMT 267 (410)
T ss_pred -------------------------ccccchhhHHHHHhChhHHHHHHHHHHHHHHH----HHHHHHHHHHHhhccCCCC
Confidence 00001112345566655444444433333332 2344566666665432 13
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCC
Q 013044 343 ASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNF 422 (451)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (451)
...+.........+..+|+++++++.||+++|+.+.+...+..++.++.... +. ......+.+.+++.+. .
T Consensus 268 ~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~-----~~-~~~~~~l~~~glf~s~---~ 338 (410)
T TIGR00885 268 AGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFA-----GG-HVGLYCLTLCSAFMSL---M 338 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHc-----CC-hHHHHHHHHHHHHHHH---H
Confidence 3444556666678889999999999999999998877766666655544331 22 2234444555555554 4
Q ss_pred Cceeeeeeecchhhhhhhhhhhee
Q 013044 423 NPSKIYHFRIFFFEMTRIVCSIYC 446 (451)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~ 446 (451)
+|..+....+..+++.+..+.+++
T Consensus 339 fp~i~sl~~~~~g~~~~~~s~~l~ 362 (410)
T TIGR00885 339 FPTIYGIALKGLGQDTKYGAAGLV 362 (410)
T ss_pred HHHHHHHHHhhhhhhhhhhHHHHH
Confidence 577788888877877765455443
|
This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector. |
| >PRK11652 emrD multidrug resistance protein D; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=9e-28 Score=226.70 Aligned_cols=318 Identities=14% Similarity=0.087 Sum_probs=224.7
Q ss_pred ccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhh
Q 013044 66 YDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP 145 (451)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~ 145 (451)
+......+.+|.+.++ +|.++.+.+++.+++.+++.+++++.|+++||+|||+++.++.++..++.+++.+++
T Consensus 22 ~~~~~~~p~~~~i~~~-------~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~ 94 (394)
T PRK11652 22 MAQTIYVPAIADMARD-------LNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAH 94 (394)
T ss_pred HHHHHHhccHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHc
Confidence 4555667778888888 999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHH
Q 013044 146 DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAV 225 (451)
Q Consensus 146 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~ 225 (451)
+++.+++.|++.|++.+...+....+..|.+++++|+++.++...+..+|..++|.+++.+.+.. +||+.|++.++..+
T Consensus 95 ~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~-g~~~~f~~~~~~~~ 173 (394)
T PRK11652 95 SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLF-GWRACYLFLLLLGA 173 (394)
T ss_pred cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ChHHHHHHHHHHHH
Confidence 99999999999999999888888889999999999999999999999999999999999998876 99999999887766
Q ss_pred H-HHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhccc
Q 013044 226 I-MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGK 304 (451)
Q Consensus 226 ~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (451)
+ ..+..+++||+++.. + + +++.+..+++.++++
T Consensus 174 ~~~~~~~~~~~~~~~~~---~---------~----------------------------------~~~~~~~~~~~~~~~ 207 (394)
T PRK11652 174 GVTFSMARWMPETRPAD---A---------R----------------------------------RTRVLASYRTLLSNR 207 (394)
T ss_pred HHHHHHHHhCCccCccc---c---------c----------------------------------hhHHHHHHHHHHcCh
Confidence 6 344455667754310 0 0 000011234455554
Q ss_pred chhHHHHHHHHHHHHHhhchhHHHHhHHHHHHH-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHH
Q 013044 305 CLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSG 383 (451)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 383 (451)
..+...+..... ..+......+.+.++++ .|+ +..+.+.......++.+++..+.+++.||++++... ....
T Consensus 208 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~--~~~~ 280 (394)
T PRK11652 208 RFNCYLLMLIGT----LAGIAVFEACSGVLMGAVLGL-SSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQ--SVIC 280 (394)
T ss_pred HHHHHHHHHHHH----HHHHHHHHHhChHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHH
Confidence 434333322221 11222333344555555 687 788888888888889999999999999998833222 2222
Q ss_pred HHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheeee
Q 013044 384 IVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCAK 448 (451)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (451)
..++.+.+...........+......++.+.+.+. ..|....+..+..| +.++++.++.++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~-~~~g~~~~~~~~ 341 (394)
T PRK11652 281 CLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGM---LFPLATSGAMEPFP-YLAGTAGALLGG 341 (394)
T ss_pred HHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH---HHHHHHHHHHhhcc-ccchHHHHHHHH
Confidence 22222221111111112334444445555555554 45555666666666 467777776543
|
|
| >TIGR00892 2A0113 monocarboxylate transporter 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.3e-28 Score=230.81 Aligned_cols=337 Identities=10% Similarity=0.051 Sum_probs=227.1
Q ss_pred ccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhH
Q 013044 68 IGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDF 147 (451)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~ 147 (451)
...++..+|.+.++ +|.+.++.+++.+.+.++..++.++.|+++||+|||++++.+.++.+++.+++++++++
T Consensus 35 ~~~~~~~~~~i~~~-------~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~ 107 (455)
T TIGR00892 35 PKAVTVFFKELQQI-------FQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNV 107 (455)
T ss_pred hcchhhhHHHHHHH-------hCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhH
Confidence 34567778888888 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH-HHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHH
Q 013044 148 IIMVV-GRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (451)
Q Consensus 148 ~~l~~-~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~ 226 (451)
+.+++ .|+++|++.+...+...+++.++++ ++|+++.++...+..+|..++|++++.+.+.. |||+.|++.+++.++
T Consensus 108 ~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~-gwr~~f~~~~~~~~~ 185 (455)
T TIGR00892 108 IELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESF-GWRGSFLILGGLLLH 185 (455)
T ss_pred HHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHH
Confidence 98875 5799999999877778888899996 78999999999999999999999999998887 999999999988776
Q ss_pred HHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhcccch
Q 013044 227 MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCL 306 (451)
Q Consensus 227 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (451)
..+..+++.+.+... .+.+.++ ++ +...+.... +... .. ..++..+....++++++..
T Consensus 186 ~~v~~~~~~~~~~~~-~~~~~~~-------~~---------~~~~~~~~~-~~~~-~~---~~~~~~~~~~~~~~~~~~~ 243 (455)
T TIGR00892 186 CCVCGALMRPVGPSQ-RVSKSKS-------KE---------GLPPDGSTK-KLSK-KS---TAEKINRFLDFSLFTHRGF 243 (455)
T ss_pred HHHHHHHhCCCCccc-ccccccc-------cc---------cCCCCCccc-cccc-cc---hhhhhhhhcchHHhcCchH
Confidence 444444433221100 0000000 00 000000000 0000 00 0000001111235555443
Q ss_pred hHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhc--CCchhhhchh--H
Q 013044 307 KALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERL--GRRPLLLGGV--S 382 (451)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~--g~~~~~~~~~--~ 382 (451)
+.......+ ...+......+.+.+.++.|+ +..+++....+.+++.++++++.+++.||. ++|+....+. +
T Consensus 244 ~~~~~~~~l----~~~~~~~~~~~l~~~~~~~g~-s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 318 (455)
T TIGR00892 244 LVYLSGNVI----MFLGFFAPIIFLVPYAKDKGV-DEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALL 318 (455)
T ss_pred HHHHHHHHH----HHHHccchHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHH
Confidence 332222222 222233455677777788888 889999999999999999999999999974 3333333322 2
Q ss_pred HHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheeee
Q 013044 383 GIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCAK 448 (451)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (451)
..+++.+++.. .++.+..++..++++.+++. ..+.......+.+|++.++++.++.++
T Consensus 319 ~~~l~~ll~~~-----~~~~~~~~i~~~~~G~~~g~---~~~~~~~~~~~~~~~~~~g~~~g~~~~ 376 (455)
T TIGR00892 319 FNGLTHLLCAL-----AGDYTGLVIYCIFFGLSFGS---VGALLFEVLMDLVGAQRFSSAVGLVTI 376 (455)
T ss_pred HHHHHHHHHHH-----hchHHHHHHHHHHHHHHhch---HHHHHHHHHHHHhhHHHHhhHHhHHHH
Confidence 22222222211 23445555555566666554 455666777888899999999887654
|
|
| >TIGR00899 2A0120 sugar efflux transporter | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.9e-28 Score=225.22 Aligned_cols=320 Identities=17% Similarity=0.132 Sum_probs=223.0
Q ss_pred hhhhhccccccccccccc-ccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHH-HHHHHHHHH
Q 013044 60 GGLLYGYDIGSTSCATIS-IESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELI-LAALLYLVG 137 (451)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~-~~~~l~~~~ 137 (451)
.+++.++..+...+.+|. +.++ +|.+..++|++.+++.+...+.+++.|+++||+||||.++ .+..+..++
T Consensus 5 ~~~~~~~~~~~~~~~l~~~l~~~-------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~ 77 (375)
T TIGR00899 5 VAFLTGIAGALQFPTLSLFLSEE-------VRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALA 77 (375)
T ss_pred HHHHHHHHHHHHhhHHHHHHHcc-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHH
Confidence 345566666677777776 4566 8999999999999999999999999999999999988765 466666778
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchH--HHHHHHHHHHHHHHHHHHhhhhcccccchhH
Q 013044 138 ALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQL--ISLKEFFIVLGMVGGYGIGSLLVDLVAGWRY 215 (451)
Q Consensus 138 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~ 215 (451)
.+++++++|++.+++.|++.|.+.+...|...++..|+.++++|++. .++...+.++|.++||.+++.+.+.. +||+
T Consensus 78 ~~~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~-~~~~ 156 (375)
T TIGR00899 78 CLLFAWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGF-GFTV 156 (375)
T ss_pred HHHHHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhc-ccHH
Confidence 88889999999999999999988888889888999999887777654 57888889999999999999998877 9999
Q ss_pred HHhhhHHHHHHHH-HHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccc
Q 013044 216 MYGASTPLAVIMG-MGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKE 294 (451)
Q Consensus 216 ~f~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (451)
.|++.+++.++.. +..+++||+|+.. + + ++++
T Consensus 157 ~f~~~~~~~~~~~~~~~~~~~~~~~~~---~---~-----------------------------------------~~~~ 189 (375)
T TIGR00899 157 MFLTAALAFVLCGVLVWLFLPSYPRGA---P---G-----------------------------------------ALTR 189 (375)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcccCc---c---c-----------------------------------------ccCc
Confidence 9999988877744 4445578765410 0 0 0000
Q ss_pred cchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHH-HHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 013044 295 VSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASIL-QSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGR 373 (451)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~ 373 (451)
.+.++.++++..+.......+.... ......+.|.++ ++.|. ++.+.+.......+..+++.++.+++.||++|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~-~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~ 264 (375)
T TIGR00899 190 LEVRGLLASRDTRLLFVACTLMWGC----NILYIINMPLLIIHELGL-PDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGK 264 (375)
T ss_pred chhhhhhcCcchHHHHHHHHHHHHH----HHHHHhhhHHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcc
Confidence 1112234444334333322222221 122334455555 45687 77888888777777888889999999999999
Q ss_pred chhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheeee
Q 013044 374 RPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCAK 448 (451)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (451)
|+.+..+.....+....+.. .++.+...+...+.+.+.+. ..+....+..|..|++ ++.+.++.+.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~g~---~~~~~~~~~~~~~~~~-~~~~~~~~~~ 330 (375)
T TIGR00899 265 RRLMLLAALAGVAFYTGLAA-----DNSLWALLMLQLLNAIFIGI---LAGIGMLYFQDLMPGR-AGAATTLYTN 330 (375)
T ss_pred hhHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHhCcch-hhHHHHHHHH
Confidence 99887765554443332221 12334344444444444444 3455556677877765 4577776544
|
This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria. |
| >cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=222.67 Aligned_cols=304 Identities=32% Similarity=0.398 Sum_probs=250.7
Q ss_pred HHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHH
Q 013044 57 PALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLV 136 (451)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~ 136 (451)
+.+..+...++.....+..|.+.++ ++.++.+.+++.+.+.++..+++++.|+++||+|||+.+..+.++..+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~ 76 (352)
T cd06174 4 LFLGFFLSGLDRGLLSPALPLLAED-------LGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFAL 76 (352)
T ss_pred HHHHHHHHHHhhhhhHhhHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHH
Confidence 3455566677777888888888877 789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHH
Q 013044 137 GALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYM 216 (451)
Q Consensus 137 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~ 216 (451)
+.++..+.++++.++++|++.|++.+...+...+++.|++|+++|++.+++......+|..+++.+++.+.+.. +||+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~ 155 (352)
T cd06174 77 GSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESL-GWRWL 155 (352)
T ss_pred HHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHh-hHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999887 89999
Q ss_pred HhhhHHHHHHHHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccc
Q 013044 217 YGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVS 296 (451)
Q Consensus 217 f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (451)
+++.+++.++..+...+++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~------------------------------------------------------------- 174 (352)
T cd06174 156 FLILAILGLLLALLLLFLL------------------------------------------------------------- 174 (352)
T ss_pred HHHHHHHHHHHHHHHHHHH-------------------------------------------------------------
Confidence 9998888777554443321
Q ss_pred hhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHc-CCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCch
Q 013044 297 LREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSA-GFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRP 375 (451)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~ 375 (451)
+.+....+..+...........+.+.+.++. +. +..+.+.......++.+++.++.+++.||++||+
T Consensus 175 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 242 (352)
T cd06174 175 -----------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGL-SAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRR 242 (352)
T ss_pred -----------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 1111122222233333456667778777765 77 8899999999999999999999999999999999
Q ss_pred -hhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheeeee
Q 013044 376 -LLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCAKL 449 (451)
Q Consensus 376 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (451)
.+..+.....++.+.+... ++.+...+...+.+.+.+. ..+....+..|..|++.|++..++.+..
T Consensus 243 ~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (352)
T cd06174 243 LLLLIGLLLAALGLLLLALA-----PSLALLLVALLLLGFGLGF---AFPALLTLASELAPPEARGTASGLFNTF 309 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHHHhc---cchhHHHHHHhhcCHHHHHHHHHHHHHH
Confidence 8888888877777766542 3345555556666666665 6778888999999999999998876543
|
MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3 |
| >PRK11195 lysophospholipid transporter LplT; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=225.02 Aligned_cols=327 Identities=11% Similarity=0.035 Sum_probs=222.2
Q ss_pred HhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHH
Q 013044 59 LGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGA 138 (451)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~ 138 (451)
++.++..+.........+.+.++ ++.++.+.+++.+.+.+++.++++++|+++||+|||++++++.++.++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~ 82 (393)
T PRK11195 10 AAQFFSALADNALLFAAIALLKE-------LHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGC 82 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-------cCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHH
Confidence 33344444333333444445555 78889999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHh
Q 013044 139 LVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYG 218 (451)
Q Consensus 139 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~ 218 (451)
++++++++. ++.|+++|++.+...|...+++.|++|+++|++++++.+....+|.++||.+++.+.+. .|+..+.
T Consensus 83 ~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~--~~~~~~~ 157 (393)
T PRK11195 83 LLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP--HAEAALA 157 (393)
T ss_pred HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHH
Confidence 888877664 78899999999999999999999999999999999999999999999999999999875 5888887
Q ss_pred hhHHHHHHHHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchh
Q 013044 219 ASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLR 298 (451)
Q Consensus 219 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (451)
+.+...++..+..+.+||+|+.. + +++.+. . +. .++. ....+
T Consensus 158 i~~~~~~~~~~~~~~l~~~~~~~---~-~~~~~~----~---~~----------------~~~~-----------~~~~~ 199 (393)
T PRK11195 158 VCALIYLLAALFNLFIPRLGARR---P-GQSWNP----I---AL----------------LRDF-----------FHACR 199 (393)
T ss_pred HHHHHHHHHHHHHhcCCCCcccc---c-ccCCCH----H---HH----------------HHHH-----------HHHHH
Confidence 77666555555556678765310 0 000000 0 00 0000 01123
Q ss_pred hhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHH-HcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhh
Q 013044 299 EVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQ-SAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLL 377 (451)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~ 377 (451)
.+++++..+.......+..... ....+..+.+++ ..|. ++.+.+.......++.+++.+..+++.||.++++.+
T Consensus 200 ~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~lg~-s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~ 274 (393)
T PRK11195 200 VLWRDKLGRFSLAGTTLFWGAG----ATLRFLVLAWAPVALGI-TLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVL 274 (393)
T ss_pred HHHhCchhHHHHHHHHHHHHHH----HHHHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchH
Confidence 5566655444433322222211 123333444444 4577 888999999999999999999999999999988777
Q ss_pred hchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhh-hhhhhheeeee
Q 013044 378 LGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMT-RIVCSIYCAKL 449 (451)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 449 (451)
..+.. .++....+.. .++.+......++.+.+.+. ...+ ..+...+..|++. +|.+.++.+..
T Consensus 275 ~~g~~-~~~~~~~~~~-----~~~~~~~~~~~~~~G~~~g~--~~~~-~~~~~q~~~~~~~~~g~~~a~~~~~ 338 (393)
T PRK11195 275 PAGIL-MGLVVLLMAL-----QHSLLPAYPLLILIGALGGF--FVVP-MNALLQHRGHVLVGAGHSIAVQNFN 338 (393)
T ss_pred HHHHH-HHHHHHHHHH-----HhHHHHHHHHHHHHHHhhhh--hhhh-HHHHHHhhCcccccchhHHHHHhHH
Confidence 66643 2332222221 23344444444455555555 3333 3455566666654 68877766544
|
|
| >KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7e-27 Score=219.15 Aligned_cols=251 Identities=25% Similarity=0.293 Sum_probs=205.0
Q ss_pred cccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhh--HHHHHHHHHHHHHHHhhhh
Q 013044 88 WYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPD--FIIMVVGRFVFGIGIGLAM 165 (451)
Q Consensus 88 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~--~~~l~~~r~l~G~~~~~~~ 165 (451)
++++++.+.|++.+.++.|+.+++++.|++.||+|.|+++..+.++.++++++...+.+ ++.+++.|++||++.|..+
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~ 146 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLF 146 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHH
Confidence 47999999999999999999999999999999999999999999999999999998754 5688999999999999999
Q ss_pred hhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhh-cccCchHHHHHh
Q 013044 166 HAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMW-WLPASPRWLLLC 244 (451)
Q Consensus 166 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~-~~~e~~~~~~~~ 244 (451)
|+...+.++|.|++||++..++..++..+|.+++.+++|++.+...||++.|++.++++++..++++ +..|+|....
T Consensus 147 pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~-- 224 (466)
T KOG2532|consen 147 PAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHP-- 224 (466)
T ss_pred hhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCC--
Confidence 9999999999999999999999999999999999999999999833999999999999999666554 4566665200
Q ss_pred hccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccc--cccchhhhhcccchhHHHHHHHHHHHHHhh
Q 013044 245 AMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGED--KEVSLREVFHGKCLKALIIGAGLVLFQQIT 322 (451)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (451)
.-. ..|.+.+.+.+...+.+ .+.+++++++++..+.. .+..+....
T Consensus 225 --------~is--------------------~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai----~~~~f~~~~ 272 (466)
T KOG2532|consen 225 --------NIS--------------------EKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAI----WISAFGGNW 272 (466)
T ss_pred --------CCC--------------------HHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHH----HHHHHHHHH
Confidence 000 11111111111111111 46789999997544443 344444555
Q ss_pred chhHHHHhHHHHHHH-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 013044 323 GQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGR 373 (451)
Q Consensus 323 ~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~ 373 (451)
+...+..|.|.|+++ +++ +..+.|++.++..+...+..+++|.++||..+
T Consensus 273 ~~~~l~~y~PtY~~~VL~f-~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~ 323 (466)
T KOG2532|consen 273 GFYLLLTYLPTYLKEVLGF-DVRETGFLSALPFLAMAIVKFVAGQLSDRLTF 323 (466)
T ss_pred HHHHHHHHhhHHHHHHhCC-ChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 567888999999986 577 99999999999999999999999999998865
|
|
| >PRK09874 drug efflux system protein MdtG; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-27 Score=227.03 Aligned_cols=326 Identities=15% Similarity=0.072 Sum_probs=222.1
Q ss_pred HHhhhhhcccccccccccccccCCCCCCcccccCCchh-----HHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHH
Q 013044 58 ALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVE-----IGLITSGSLYGALIGSILAFNIADILGRRRELILAAL 132 (451)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-----~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~ 132 (451)
.++.++.++......+.+|.+.++ +|.+..+ .|++.+++.++..+++++.|+++||+|||++++.+.+
T Consensus 20 ~~~~~~~~~~~~~~~~~l~~~~~~-------~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 92 (408)
T PRK09874 20 WLGCFLTGAAFSLVMPFLPLYVEQ-------LGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSAL 92 (408)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHH-------hCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHH
Confidence 344455566666778888888777 7777544 5899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccc
Q 013044 133 LYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAG 212 (451)
Q Consensus 133 l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~ 212 (451)
+.+++.+++.+.++++.+++.|++.|++.+ ..+....++.|++|+++|+++.++......+|..++|.+++.+.+.. +
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~ 170 (408)
T PRK09874 93 GMGIVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSY-G 170 (408)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-C
Confidence 999999999999999999999999999865 56778888999999999999999999999999999999999998876 9
Q ss_pred hhHHHhhhHHHHHHHH-HHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhccccc
Q 013044 213 WRYMYGASTPLAVIMG-MGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGE 291 (451)
Q Consensus 213 wr~~f~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (451)
||+.|++.+++.++.. ...+++||+++... + .++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----------~~~--------------------------------- 205 (408)
T PRK09874 171 LRPVFFITASVLFLCFLVTLFCIRENFQPVS--K----------KEM--------------------------------- 205 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCccccc--c----------hhh---------------------------------
Confidence 9999999988877643 34445565432000 0 000
Q ss_pred ccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCch---hHHHHHHHHHHHHHHHHHHHHHHh
Q 013044 292 DKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAAS---DATRVSILLGLFKLIMTGLAVLVV 368 (451)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~---~~~~~~~~~~~~~~~~~~~~g~l~ 368 (451)
.+..+..+.++++..........+ .. .........+.+.+..+.+..... ..+......+++.+++.+..+++.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~ 282 (408)
T PRK09874 206 LHMREVVTSLKNPKLVLSLFVTTL--II-QVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLG 282 (408)
T ss_pred hHHHHHHHhCcCCchHHHHHHHHH--HH-HHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000001122333322221111111 11 111122333445555544331211 234555667788888999999999
Q ss_pred hhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheeee
Q 013044 369 ERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCAK 448 (451)
Q Consensus 369 d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (451)
||++||+.+..+..+..++.+.+.. .++.+...+..++.+.+.+. ..+.......+..|++.++...++.+.
T Consensus 283 dr~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~ 354 (408)
T PRK09874 283 DRIGPEKILITALIFSVLLLIPMSF-----VQTPLQLGILRFLLGAADGA---LLPAVQTLLVYNSSNQIAGRIFSYNQS 354 (408)
T ss_pred hccccchhHHHHHHHHHHHHHHHHH-----hccHHHHHHHHHHHHhhhHh---hHHHHHHHHHHhCCcccceeeehHHHH
Confidence 9999999888777666555544332 13344444444455555554 445555556667788888877765443
|
|
| >TIGR00897 2A0118 polyol permease family | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-27 Score=225.21 Aligned_cols=308 Identities=12% Similarity=0.033 Sum_probs=208.3
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHH---H-hhhHHHHHHHHHHHHHHHhhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTA---L-APDFIIMVVGRFVFGIGIGLA 164 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~---~-~~~~~~l~~~r~l~G~~~~~~ 164 (451)
+|.++.+.|++.+.+.+++.+++++.|++.||+|||+++..+.++.+++.+++. + .++++.+++.|++.|++.+..
T Consensus 43 ~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~ 122 (402)
T TIGR00897 43 LGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLF 122 (402)
T ss_pred hCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHH
Confidence 799999999999999999999999999999999999999999999999877653 3 357889999999999999888
Q ss_pred hhhHHHHHHhccCCCCcchHHHHHHHHHHHHH-HHHHHHhhhhcccccchhHHHhhhHHHHHH-HHHHhhcccCchHHHH
Q 013044 165 MHAAPMYIAETAPTPMRGQLISLKEFFIVLGM-VGGYGIGSLLVDLVAGWRYMYGASTPLAVI-MGMGMWWLPASPRWLL 242 (451)
Q Consensus 165 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~-~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~-~~~~~~~~~e~~~~~~ 242 (451)
.+...+.+.+++|+++|++++|+.+++.++|. .++|++++.+.+.. ||+..++.......+ .++..++.++.++.
T Consensus 123 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 199 (402)
T TIGR00897 123 AYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAF-GEMNTLWSALAFVLTGGVIALFSNKDIFTP-- 199 (402)
T ss_pred HhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-chHHHHHHHHHHHHHHHHHHHhccCCCCCc--
Confidence 88888889999999999999999999999997 68999999888876 876665544443333 22233334432210
Q ss_pred HhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhcccchhHHHHHHHHHHHHHhh
Q 013044 243 LCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQIT 322 (451)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (451)
+ ++.+. ++ .++.+..++.+++++..+...+... ....
T Consensus 200 --~--~~~~~----~~-------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 236 (402)
T TIGR00897 200 --Q--HMQTR----EK-------------------------------FSELGKAATILFTNPNVLLGGMVRI----INTI 236 (402)
T ss_pred --c--cccCC----cc-------------------------------hhhHHHHHHHHHcChhHHHHHHHHH----HHHH
Confidence 0 00000 00 0000112345666654433332222 2223
Q ss_pred chhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhh-chhHHHHHHHHHHHHhhhccCCc
Q 013044 323 GQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLL-GGVSGIVISLFLLGSYYLFLDDV 401 (451)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 401 (451)
.......|.|.++++.|+ +..+.+.......++.+++.+..|+++||++||+.+. .+.+...++...+........++
T Consensus 237 ~~~~~~~~~p~~~~~~g~-s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~ 315 (402)
T TIGR00897 237 GLFGFAVFLPMFVAELGF-STSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHS 315 (402)
T ss_pred HHHHHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence 344566788989888898 8888888888899999999999999999999887653 22233333322222111111223
Q ss_pred chHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheeee
Q 013044 402 PAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCAK 448 (451)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (451)
.+...+..++++.+.+. ..+. .....+..| +.|+++.|+.+.
T Consensus 316 ~~~~~~~~~~~G~~~~~---~~~~-~~~~~~~~~-~~~g~~~g~~~~ 357 (402)
T TIGR00897 316 FAVALIIAIALGIFLAG---YVPL-AAVFPTLAP-KHKGAAMSVLNL 357 (402)
T ss_pred HHHHHHHHHHHHHHHHH---HHHH-HHHHHhhCc-chhHHHHHHHHH
Confidence 34444444444544443 2333 234456655 579999887654
|
This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis. |
| >TIGR00896 CynX cyanate transporter | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.9e-27 Score=217.93 Aligned_cols=310 Identities=17% Similarity=0.112 Sum_probs=220.5
Q ss_pred cccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHH
Q 013044 69 GSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFI 148 (451)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~ 148 (451)
...++.+|.+.++ +|.++++.|++.+++.+++.+++++.|+++||+|||+++.++.++..++.+.+ ..++++
T Consensus 17 ~~~~~~lp~l~~~-------~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~ 88 (355)
T TIGR00896 17 TSVGPLLPQIRSA-------LGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTA 88 (355)
T ss_pred ccCcccHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHH
Confidence 4668889999988 99999999999999999999999999999999999999999999988888887 778999
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhccccc-chhHHHhhhHHHHHHH
Q 013044 149 IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVA-GWRYMYGASTPLAVIM 227 (451)
Q Consensus 149 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~-~wr~~f~~~~~~~~~~ 227 (451)
.+++.|++.|++.+...+....++.|+++ ++|++++++.+.+.++|..+++.+++.+.+... +||+.|.+.++..++.
T Consensus 89 ~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~ 167 (355)
T TIGR00896 89 LLFAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLA 167 (355)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Confidence 99999999999999888888889999986 689999999999999999999999988876542 4999998776654433
Q ss_pred HHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhcccchh
Q 013044 228 GMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLK 307 (451)
Q Consensus 228 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (451)
.. .++|+.++. . ++ +++..+...+++++++..+
T Consensus 168 ~~--~~~~~~~~~----~--~~---------------------------------------~~~~~~~~~~~~~~~~~~~ 200 (355)
T TIGR00896 168 LL--AWIPQVRRR----V--AA---------------------------------------NQTTTRLTPVRIWRSPLAW 200 (355)
T ss_pred HH--HHhhhhccc----c--CC---------------------------------------CCCCCCCCCchhhcCHhHH
Confidence 22 233432210 0 00 0000111234455554433
Q ss_pred HHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CchhhhchhHHHHH
Q 013044 308 ALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLG-RRPLLLGGVSGIVI 386 (451)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g-~~~~~~~~~~~~~~ 386 (451)
...+...+ ....+.....|.|.++++.|+ +..+.+...+...++.++++++.|++.||++ ||+.+..+..+..+
T Consensus 201 ~~~~~~~~----~~~~~~~~~~~lp~~~~~~g~-~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 275 (355)
T TIGR00896 201 QVTVFFGL----QSGLYYSLIGWLPAILISHGA-SAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLV 275 (355)
T ss_pred HHHHHHHH----HHHHHHHHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHH
Confidence 33222222 222234556688888888888 8889999999999999999999999999994 56666666666666
Q ss_pred HHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeee-ecchhhhhhhhhhheeee
Q 013044 387 SLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHF-RIFFFEMTRIVCSIYCAK 448 (451)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 448 (451)
+.+.+... ..+ .... ...+++.+.+. ..|...... .+..+++.++...++.++
T Consensus 276 ~~~~~~~~----~~~-~~~~-~~~l~g~~~g~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 329 (355)
T TIGR00896 276 GLCGLLFA----PMH-GLWA-WALVLGLGQGG---AFPLALTLIGLRSRQAAQAAALSAMAQS 329 (355)
T ss_pred HHHHHHHh----hhh-HHHH-HHHHHHHhhhh---HhHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 55544332 111 1111 23344444443 344433333 344456667777766543
|
This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate. |
| >PRK10489 enterobactin exporter EntS; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-28 Score=231.21 Aligned_cols=318 Identities=15% Similarity=0.083 Sum_probs=232.0
Q ss_pred cccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHH---
Q 013044 67 DIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL--- 143 (451)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~--- 143 (451)
......+.+|.+.++ ++.++.+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++.+.
T Consensus 32 ~~~~~~~~~~~~~~~-------~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~ 104 (417)
T PRK10489 32 GLGLLGVAVPVQIQM-------MTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAF 104 (417)
T ss_pred HHHHHHHHHHHHHHH-------HHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHH
Confidence 344556667777766 7889999999999999999999999999999999999999988888877766543
Q ss_pred --hhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhH
Q 013044 144 --APDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGAST 221 (451)
Q Consensus 144 --~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~ 221 (451)
.++++.+++.|++.|++.+...+...+++.|+.|+++|+++.++......+|..+||.+++.+.+.. +||+.|++.+
T Consensus 105 ~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~-~~~~~~~~~~ 183 (417)
T PRK10489 105 LPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAG-GVAWNYGLAA 183 (417)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHH-hhHHHHHHHH
Confidence 5678999999999999999888999999999999999999999999999999999999999998876 8999999888
Q ss_pred HHHHHHHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhh
Q 013044 222 PLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVF 301 (451)
Q Consensus 222 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (451)
+..++..+..+.+|++++.. . .+. + .. ++....++.++
T Consensus 184 ~~~~~~~~~~~~l~~~~~~~---~----~~~----~--------------------~~-----------~~~~~~~~~~~ 221 (417)
T PRK10489 184 AGTFITLLPLLRLPALPPPP---Q----PRE----H--------------------PL-----------RSLLAGFRFLL 221 (417)
T ss_pred HHHHHHHHHHHhCCCCCCCC---c----ccc----c--------------------ch-----------HHHHHHHHHHH
Confidence 87777666666677654210 0 000 0 00 00011233445
Q ss_pred cccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHH-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhch
Q 013044 302 HGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGG 380 (451)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~ 380 (451)
+++..+..++..++..+ ......+.|.+.++ .|. +....+.......++.+++.++.+++.||.++++.+..+
T Consensus 222 ~~~~~~~~~~~~~~~~~-----~~~~~~~~p~~~~~~~g~-~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~ 295 (417)
T PRK10489 222 ASPVVGGIALLGGLLTM-----ASAVRVLYPALADEVWQM-GAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLS 295 (417)
T ss_pred cChHHHHHHHHHHHHHH-----HHhHHHhhHHHHHhccCC-ChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHH
Confidence 54443333332222111 12345567777777 788 888899999999999999999999999998777777776
Q ss_pred hHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheeee
Q 013044 381 VSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCAK 448 (451)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (451)
..+..++.+++.. .++.+...+..++++.+.+. ..+...++..+..|++.|+++.++..+
T Consensus 296 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~p~~~~g~~~g~~~~ 355 (417)
T PRK10489 296 TLGSFLAVGLFGL-----MPMWILAVLCLALFGYLSAI---SSLLQYTLLQTQTPDEMLGRINGLWTA 355 (417)
T ss_pred HHHHHHHHHHHHc-----cchHHHHHHHHHHHHHHHHH---HHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 6666665544432 23333334444444444443 345556778889999999999987654
|
|
| >PRK10473 multidrug efflux system protein MdtL; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-26 Score=218.57 Aligned_cols=269 Identities=17% Similarity=0.209 Sum_probs=207.1
Q ss_pred cccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhh
Q 013044 67 DIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPD 146 (451)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~ 146 (451)
......+.+|.+.++ +|.++.+.++..+.+.++..+++++.|+++||+|||++++.+.++.+++.+++..+++
T Consensus 18 ~~~~~~~~lp~~~~~-------~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~ 90 (392)
T PRK10473 18 GIDMYLVGLPRIAAD-------LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAET 90 (392)
T ss_pred HHHHHhhhHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCc
Confidence 334455778998888 8999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHH
Q 013044 147 FIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (451)
Q Consensus 147 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~ 226 (451)
++.++++|+++|++.+...+...+++.|++|+++|+++.++.+....+|..++|.+++.+.+.. +||+.|++.+++.++
T Consensus 91 ~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~-g~~~~~~~~~~~~~i 169 (392)
T PRK10473 91 SSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKF-PWQSLFYTMAAMGIL 169 (392)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-ChHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999888776 999999999888777
Q ss_pred H-HHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhcccc
Q 013044 227 M-GMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKC 305 (451)
Q Consensus 227 ~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (451)
. ++..+++||+++. ++ .+ +.......++.++++.
T Consensus 170 ~~~~~~~~~~~~~~~---~~----~~--------------------------------------~~~~~~~~~~~~~~~~ 204 (392)
T PRK10473 170 VLLLSLFILKETRPA---RA----PA--------------------------------------ASSKPRENSESLLNRF 204 (392)
T ss_pred HHHHHHHHcCCCCCc---cc----CC--------------------------------------ccchHHHHHHHHhCHH
Confidence 4 4444556765320 00 00 0000011223344433
Q ss_pred hhHHHHHHHHHHHHHhhchhHHHHhHHHHH-HHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHH
Q 013044 306 LKALIIGAGLVLFQQITGQPSVLYYAASIL-QSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGI 384 (451)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 384 (451)
.....+...+.... ......+.|.++ ++.|+ +..+.+.......++.+++.++.+++.||+|+|+.+..+..+.
T Consensus 205 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~ 279 (392)
T PRK10473 205 FLSRLVITTLSVTV----ILTFVNTSPVLLMEQMGF-SRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLF 279 (392)
T ss_pred HHHHHHHHHHHHHH----HHHHHHhCHHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 22222222111111 112333445554 45688 7888888999999999999999999999999999988887777
Q ss_pred HHHHHHHHH
Q 013044 385 VISLFLLGS 393 (451)
Q Consensus 385 ~~~~~~~~~ 393 (451)
.++.+.+..
T Consensus 280 ~~~~~~~~~ 288 (392)
T PRK10473 280 LAAGITLAL 288 (392)
T ss_pred HHHHHHHHH
Confidence 666655543
|
|
| >COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-26 Score=205.35 Aligned_cols=332 Identities=18% Similarity=0.172 Sum_probs=246.6
Q ss_pred cchHHHHHHHHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchH
Q 013044 46 SVSAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRR 125 (451)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~ 125 (451)
.++..++.+....++.. .-...+++.+.+.+| +++|+.|.+++.++..+..++..++.|.+.||||.|+
T Consensus 12 ~~~~L~~S~~af~v~F~----VW~l~s~l~~~i~~~-------~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~ 80 (417)
T COG2223 12 ARRNLWLSTLAFDVGFM----VWTLFSPLGVFIKSD-------FGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRK 80 (417)
T ss_pred hhHHHHHHHHHHHHHHH----HHHHHHHHHhhhccc-------cCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchH
Confidence 33444444343333332 334566777777777 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhH---HHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHH
Q 013044 126 ELILAALLYLVGALVTALAPDF---IIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGI 202 (451)
Q Consensus 126 ~~~~~~~l~~~~~~~~~~~~~~---~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l 202 (451)
+..++.++..+-++..+++.++ +++++++.+.|++.+ .+.+...++++++|++++|.++|+.. ..|+|..+...+
T Consensus 81 ~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~ 158 (417)
T COG2223 81 WTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGA-SFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLV 158 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcccc-eehcccccccccCChhhhhHHHHHhc-cccccHHHHHHH
Confidence 9999999999999999998654 599999999999855 88889999999999999999999999 889999988888
Q ss_pred hhhhcccccc---hhHHHhhhHHHHHH-HHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchh
Q 013044 203 GSLLVDLVAG---WRYMYGASTPLAVI-MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTE 278 (451)
Q Consensus 203 ~~~l~~~~~~---wr~~f~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (451)
+..+.... + ||....+..+..++ .+..++...|.|......
T Consensus 159 ~P~v~~~~-g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~---------------------------------- 203 (417)
T COG2223 159 APLVAVAF-GFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASV---------------------------------- 203 (417)
T ss_pred HHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccc----------------------------------
Confidence 88888776 6 99999999888888 444555566665421000
Q ss_pred HHHHHHhhcccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHH-HcCCCCchhHHHHHHHHHHHH
Q 013044 279 VDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQ-SAGFSAASDATRVSILLGLFK 357 (451)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~ 357 (451)
++..+...+.++++++.+.+.+ .++..+.++..+..+.|.+++ +++. ++.+++.......+.+
T Consensus 204 -----------~~~~~~~~~~v~~~~~~W~lsl----lY~~tFG~Fvgfs~~l~~~~~~~fg~-~~~~Ag~~a~~f~~~g 267 (417)
T COG2223 204 -----------KPQLPAQLKAVFSNKDTWLLSL----LYFATFGGFVGFSAYLPMYLVTQFGL-SPVTAGLIAFLFPLIG 267 (417)
T ss_pred -----------cccchhHHHHHhcCcchHHHHH----HHHHHHHHHHHHHHHHHHHHHHhcCC-ChhhHHHHHHHHHHHH
Confidence 0001133455666554444333 333345555677778888875 6788 8999999999999999
Q ss_pred HHHHHHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhhhccC--CcchHHHHHHHHHHHhhccccCCCceeeeeeecchh
Q 013044 358 LIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLD--DVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFF 435 (451)
Q Consensus 358 ~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (451)
.+.++++|+++||+|.++.+...+..++++..++........ ...+..+...+....+.+. +-. ..+-++..++|
T Consensus 268 ~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~--GnG-svfk~Ip~if~ 344 (417)
T COG2223 268 ALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGL--GNG-SVFKMIPVIFP 344 (417)
T ss_pred HHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhcc--Ccc-hheeechHHHH
Confidence 999999999999999999998888888888777665432211 2344444445555566666 434 34677777777
Q ss_pred hhhhhhhhhe
Q 013044 436 EMTRIVCSIY 445 (451)
Q Consensus 436 ~~~~~~~~~~ 445 (451)
++.. ...|+
T Consensus 345 ~~~G-~v~G~ 353 (417)
T COG2223 345 KETG-AVTGI 353 (417)
T ss_pred hhhh-HHHHH
Confidence 7543 33443
|
|
| >TIGR00901 2A0125 AmpG-related permease | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.4e-27 Score=218.93 Aligned_cols=324 Identities=13% Similarity=0.026 Sum_probs=228.0
Q ss_pred ccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhh-----cchHH-HHHHHHHHHHHHHHH
Q 013044 68 IGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADIL-----GRRRE-LILAALLYLVGALVT 141 (451)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~~-~~~~~~l~~~~~~~~ 141 (451)
....++.+|.+.+| +|+|.+++|+..+. .+...+ .+++|+++||+ ||||. ++.+.++.++...+.
T Consensus 4 ~~~~~~~~~~~~~~-------~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l 74 (356)
T TIGR00901 4 LGLVGNTLPYWLRS-------KNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLIL 74 (356)
T ss_pred chhHHhHHHHHHHH-------cCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 34556677888877 89999999999766 455555 99999999998 89887 567777788877777
Q ss_pred HHh---hhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccc------
Q 013044 142 ALA---PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAG------ 212 (451)
Q Consensus 142 ~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~------ 212 (451)
++. .+++.+.+..++.+++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++.+.+.. +
T Consensus 75 ~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~-g~~~~~~ 153 (356)
T TIGR00901 75 SFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPE-FANTGLI 153 (356)
T ss_pred HcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhc-ccccccc
Confidence 776 466777888888999999999999999999999999999999999999999999999999888776 6
Q ss_pred --hhHHHhhhHHHHHHHHHHhh-cccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhccc
Q 013044 213 --WRYMYGASTPLAVIMGMGMW-WLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYV 289 (451)
Q Consensus 213 --wr~~f~~~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (451)
||..|++.++..++..+..+ ..||+++. ++ + ..++
T Consensus 154 ~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~---~~-----~---~~~~------------------------------- 191 (356)
T TIGR00901 154 TLWGYIFFWTALLILPGLLVTLFLAKEPQED---AS-----V---PKPL------------------------------- 191 (356)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHhccCCCcc---cc-----c---chhH-------------------------------
Confidence 99999999988777554444 34654220 00 0 0000
Q ss_pred ccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHH-HHHHHHHHHHHHHh
Q 013044 290 GEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLG-LFKLIMTGLAVLVV 368 (451)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~-~~~~~~~~~~g~l~ 368 (451)
.++.+..++++++++..++.........+. .........+.+.++++.|+ +..+.+......+ +..+++.++++++.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~g~-~~~~~g~~~~~~~~~~~~~g~~~~g~l~ 269 (356)
T TIGR00901 192 TQAVLKPIREFFQRKNMIQALLLLLLIVLY-KLGDSAATVLTTLFLLDMGF-SKEEIALVAKINGLLGAILGGLIGGIIM 269 (356)
T ss_pred HHHHHHHHHHHHHhcCchHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHcCC-CHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 000011344555554423333322222222 22234555677777777888 8888887776655 67889999999999
Q ss_pred hhcCCchhhhchhHHHHHHHHHHHHhhhccC------CcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhh
Q 013044 369 ERLGRRPLLLGGVSGIVISLFLLGSYYLFLD------DVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVC 442 (451)
Q Consensus 369 d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (451)
||+|+|+.+..+.++.+++..++........ +..+......++..++.+. ..+....+..|.+|++.|++.
T Consensus 270 ~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~p~~~~g~~ 346 (356)
T TIGR00901 270 QPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGL---GTVAFVAFLSKLSNPKFGATQ 346 (356)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHH---HHHHHHHHHHHhcCCCccHHH
Confidence 9999998888777776665554433211110 2223344444444555554 567778899999999999999
Q ss_pred hheeee
Q 013044 443 SIYCAK 448 (451)
Q Consensus 443 ~~~~~~ 448 (451)
.++.++
T Consensus 347 ~g~~~~ 352 (356)
T TIGR00901 347 MALLSS 352 (356)
T ss_pred HHHHHH
Confidence 987654
|
|
| >PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins | Back alignment and domain information |
|---|
Probab=99.95 E-value=5e-26 Score=216.09 Aligned_cols=381 Identities=15% Similarity=0.127 Sum_probs=239.6
Q ss_pred ccchHHHHHHHHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcch
Q 013044 45 YSVSAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRR 124 (451)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr 124 (451)
...++.+..+..+++......+.....+..++.+..| +|- .....|+.+.+.++.++..++.|+++|.||||
T Consensus 37 ~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~d-------iG~-~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr 108 (599)
T PF06609_consen 37 YRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINAD-------IGG-SDNWSWFSTAWTLASAVSFPFVGRLSDLFGRR 108 (599)
T ss_pred eeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHh-------cCC-CccchHHHHHHHHHHHHHHHhhHHHHHHhcch
Confidence 3445555555555555554545555556677888877 774 47778999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhh
Q 013044 125 RELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGS 204 (451)
Q Consensus 125 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~ 204 (451)
++++.+.++..+|++.++.++|...++++..+.|+|.|.... ....++|..|.|+|+...++...........++.++.
T Consensus 109 ~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~ 187 (599)
T PF06609_consen 109 YFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQ 187 (599)
T ss_pred HHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHH
Confidence 999999999999999999999999999999999999887664 4556899999999998888777766666667888887
Q ss_pred hhcccccchhHHHhhhHHHHHHHHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHH-------------H-----
Q 013044 205 LLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCR-------------L----- 266 (451)
Q Consensus 205 ~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~----- 266 (451)
.+..+. +|||.|++.++...+.++..+++..+|++...++++. ...+..+.+.. +
T Consensus 188 ~~~~~~-~WRw~~~~~~i~~~i~~vl~~~fY~PP~~~~~~~~~~------s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~w 260 (599)
T PF06609_consen 188 LFAAHS-GWRWIFYIFIIWSGIALVLIFFFYFPPPRAQLHGRKL------SKREQLKELDWIGIFLFIAGLALFLLGLSW 260 (599)
T ss_pred HhccCC-CcchHHHHHHHHHHHHHHHHHHHhCCCchhhhccccC------cHHHHHHHhhHHHHHHHHHHHHHHHHHHhc
Confidence 776665 9999999999887774433333222333222111110 01111111111 1
Q ss_pred hCC-CCCCCCchhHHHHH---------Hhhcccc-cccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHH-
Q 013044 267 RGQ-SIGDSAPTEVDEIL---------TELSYVG-EDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASI- 334 (451)
Q Consensus 267 ~~~-~~~~~~~~~~~~~~---------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 334 (451)
.+. ..++....-+.... --.|... .+++.-..++++++ +.+.+.++..+...+.++....+.|..
T Consensus 261 gG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~Pl~P~~Lf~~~---r~~~~~lvi~fi~G~~~~s~~~l~p~~~ 337 (599)
T PF06609_consen 261 GGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWFGAPKDPLFPHRLFKDR---RGFAALLVISFISGMNFFSVNILWPQQV 337 (599)
T ss_pred cCCCCCCCCCccchhhHHHHHHHHHHHHHhhhhccCCCCcCCHHHhccc---hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 12233322221111 1122111 12334455677763 222222222222222223333344443
Q ss_pred HHHcCCCCc---hhHHHHHHHHHHHHHHHHHHHHHHhhhcCC-chhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHH
Q 013044 335 LQSAGFSAA---SDATRVSILLGLFKLIMTGLAVLVVERLGR-RPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALL 410 (451)
Q Consensus 335 ~~~~~~~s~---~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (451)
..-++. +. ...++...+.+++..++.++.+.+..+++| |+.++++..++.+++.+++... .++....+...+
T Consensus 338 ~~vf~~-d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~---~~n~~~~i~~~~ 413 (599)
T PF06609_consen 338 VNVFGS-DPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVR---PDNKNAAIAFLV 413 (599)
T ss_pred hhhccC-CCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHcc---CCCcchHHHHHH
Confidence 333333 33 357788889999999999999999998887 5566677666665555544332 222233334444
Q ss_pred HHHHhhccccCCCceeeeeeecchhhhhhhhhhheeeeecC
Q 013044 411 LYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCAKLRF 451 (451)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (451)
+.+.+.+. ..........-..|++.-+++.++..++|+
T Consensus 414 l~g~giG~---~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~ 451 (599)
T PF06609_consen 414 LAGFGIGG---ILVPAIVIAQLIVPDEDIGTATGLTGSIRS 451 (599)
T ss_pred HHHHhHHH---HHHHHHHeeEeeeCchHHHHHHHHHHHHHH
Confidence 44445544 233335566667899999999999888773
|
Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes []. |
| >PRK11646 multidrug resistance protein MdtH; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-26 Score=217.14 Aligned_cols=298 Identities=15% Similarity=0.139 Sum_probs=215.9
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 168 (451)
+|.+..++|++.+.+.+...+.+++.|+++||+|||+++..+.++.+++.+++.+.++++.+++.|+++|++.+...+..
T Consensus 41 ~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~ 120 (400)
T PRK11646 41 LGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPR 120 (400)
T ss_pred hCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred HHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHH-HHhhcccCchHHHHHhhcc
Q 013044 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMG-MGMWWLPASPRWLLLCAMK 247 (451)
Q Consensus 169 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~ 247 (451)
.+++.|++|+++|++++++......+|..+||.+++.+. .. +||+.|++.++..++.. +..++.||.+. +
T Consensus 121 ~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~-g~~~~f~~~~~~~~~~~i~~~~~~~~~~~-----~-- 191 (400)
T PRK11646 121 TALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QY-DFRLVCATGAVLFVLAAAFNAWLLPAYKL-----S-- 191 (400)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh-hHHHHHHHHHHHHHHHHHHHHHhCCcccc-----c--
Confidence 999999999999999999999999999999999999998 54 99999999887766643 33444554210 0
Q ss_pred ccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHH
Q 013044 248 RKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSV 327 (451)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (451)
+ . +++.+.+++++++++.............. .....
T Consensus 192 -~-----~----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 227 (400)
T PRK11646 192 -T-----V----------------------------------RTPVREGMTRVLRDKRFVTYVLTLTGYYM----LAVQV 227 (400)
T ss_pred -c-----c----------------------------------chhhHHHHHHHHcCchHHHHHHHHHHHHH----HHHHH
Confidence 0 0 00011134455555443332222211111 11123
Q ss_pred HHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHh-hhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHHH
Q 013044 328 LYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVV-ERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAV 406 (451)
Q Consensus 328 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~-d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (451)
..+.|.+.++.+. ++.+.+.......+....+....+++. ||++.++.+..+..+.+++..+++.. ++.+...
T Consensus 228 ~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~ 301 (400)
T PRK11646 228 MLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMV-----SNLQQLF 301 (400)
T ss_pred HHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHh-----hhHHHHH
Confidence 4567888888777 667788887777776665555555555 45665666666666666655544321 2333333
Q ss_pred HHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheeee
Q 013044 407 VALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCAK 448 (451)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (451)
+...+++.+.+. ..|...++..+..|++.|+++.++.+.
T Consensus 302 ~~~~l~~~g~~~---~~p~~~~~~~~~~p~~~~g~~~g~~~~ 340 (400)
T PRK11646 302 TLICLFYIGSII---AEPARETLSASLADARARGSYMGFSRL 340 (400)
T ss_pred HHHHHHHHHHHH---HHccHHHHHHhcCCcccchhhhhHHHH
Confidence 334444444444 456666788888999999999887654
|
|
| >PRK10054 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-26 Score=215.82 Aligned_cols=311 Identities=14% Similarity=0.102 Sum_probs=220.3
Q ss_pred cccccccccc-cccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhh
Q 013044 67 DIGSTSCATI-SIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP 145 (451)
Q Consensus 67 ~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~ 145 (451)
......+.+| .+.++ +|++..++|++.+++.++..+++++.|+++||+|||++++++.++.+++.++.++++
T Consensus 22 g~~~~~~~l~~~l~~~-------~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~ 94 (395)
T PRK10054 22 GRGATLPFMTIYLSRQ-------YSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVN 94 (395)
T ss_pred HHHHHHHHHHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHh
Confidence 3334444444 34555 899999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHH
Q 013044 146 DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAV 225 (451)
Q Consensus 146 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~ 225 (451)
+++.++++|++.|.+.+...+...++..|..|+++|++++++.....++|.+++|.+++.+.+ . +||..|++.+++.+
T Consensus 95 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~-g~~~~f~~~~~~~~ 172 (395)
T PRK10054 95 NVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-Q-SINLPFWLAAICSA 172 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-ccCcHHHHHHHHHH
Confidence 999999999999988888889999999999999999999999999999999999999999875 4 89999998887777
Q ss_pred HHH-HHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhccc
Q 013044 226 IMG-MGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGK 304 (451)
Q Consensus 226 ~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (451)
+.. +..+++|++++.. + ++ +++..+.++.++++
T Consensus 173 i~~i~~~~~~~~~~~~~---~-----------~~--------------------------------~~~~~~~~~~~~~~ 206 (395)
T PRK10054 173 FPLVFIQIWVQRSEKAI---A-----------TE--------------------------------TGSVWSPSVLLQDK 206 (395)
T ss_pred HHHHHHHHHHhcccccc---c-----------cc--------------------------------hhhhhhhhhhccCc
Confidence 643 3344455543200 0 00 00001123456665
Q ss_pred chhHHHHHHHHHHHHHhhchhHHHHhHHHHH---HHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchh
Q 013044 305 CLKALIIGAGLVLFQQITGQPSVLYYAASIL---QSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGV 381 (451)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~ 381 (451)
..+...+...+..+... ....+.+.+. ++.+. +....+.......+..+......+++.||.++|+.+..+.
T Consensus 207 ~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~ 281 (395)
T PRK10054 207 ALLWFTCSGFLASFVSG----AFASCISQYVMVVADSDF-AEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGT 281 (395)
T ss_pred eehHHHHHHHHHHHHHH----HhhhhHHHHHHHhcccch-HHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHH
Confidence 54444433333222211 1222333333 23344 4556677777777777777888899999999999888877
Q ss_pred HHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhh
Q 013044 382 SGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSI 444 (451)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (451)
.+..++...+... .++.+...+...+++.+.+. ..|.....+.+..|++.++++.+
T Consensus 282 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~---~~p~~~~~~~~~~p~~~~~~~~~ 337 (395)
T PRK10054 282 LCFVIGLVGFIFS----GNSLLLWGMSAAVFTVGEII---YAPGEYMLIDHIAPPGMKASYFS 337 (395)
T ss_pred HHHHHHHHHHHHc----chHHHHHHHHHHHHHHHHHH---HHhhHHHHHHHhCCcccceehHh
Confidence 6666665544321 12333334444455555443 45666677888888888887765
|
|
| >TIGR00902 2A0127 phenyl proprionate permease family protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.9e-26 Score=213.53 Aligned_cols=320 Identities=12% Similarity=0.049 Sum_probs=232.4
Q ss_pred HhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHH----HHHHHHH
Q 013044 59 LGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRREL----ILAALLY 134 (451)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~----~~~~~l~ 134 (451)
+..+...+..+...|.+|.+.++ +|.|..++|++.+++.+...++++++|+++||+||+... ..+..+.
T Consensus 11 ~~~~~~~~~~~~~~p~l~~~l~~-------~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~ 83 (382)
T TIGR00902 11 LGFFGYFCAYGIFLPFFPAWLKG-------IGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIF 83 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 34445555567778888888888 899999999999999999999999999999999985433 3332222
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchh
Q 013044 135 LVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWR 214 (451)
Q Consensus 135 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr 214 (451)
.+ .++..+++++.+++.|+++|.+.+...|...++..++ .++|++..+......++|.+++|++++.+.+.. |||
T Consensus 84 ~~--~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~-g~~ 158 (382)
T TIGR00902 84 AA--AFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMF-DEQ 158 (382)
T ss_pred HH--HHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHc-Chh
Confidence 22 3445678999999999999999998999998887765 477899999999999999999999999999987 999
Q ss_pred HHHhhhHHHHHHHHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccc
Q 013044 215 YMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKE 294 (451)
Q Consensus 215 ~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (451)
..|++.....++.++ .+.++|+++. ++ + + ++ .+.++.
T Consensus 159 ~~f~~~~~~~~~~~~-~~~~~~~~~~---~~--~--~-----~~------------------------------~~~~~~ 195 (382)
T TIGR00902 159 NILAILTAGLAFMLI-GFLIKPTIPP---KD--A--I-----PE------------------------------DESQGD 195 (382)
T ss_pred HHHHHHHHHHHHHHH-HHHcCCCCCC---Cc--c--c-----cc------------------------------cccccc
Confidence 999887655333333 3333333210 00 0 0 00 000112
Q ss_pred cchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCc
Q 013044 295 VSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRR 374 (451)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~ 374 (451)
.+.+++++++..+...+...+.. ........+.|.++++.|. +....+.......++.+++..+.+++.||+|+|
T Consensus 196 ~~~~~~l~~~~~~~~l~~~~l~~----~~~~~~~~~~~~~l~~~g~-s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~ 270 (382)
T TIGR00902 196 SAFIALLKNPMNLRFLAAVCLIQ----GAHAAYYGFSAIYWQAAGI-SASATGLLWGIGVLAEIIIFAFSNKLFQNCSAR 270 (382)
T ss_pred hhHHHHHcChHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHCCC-CHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHH
Confidence 23556777654444443333322 2234555577888888998 888999999999999999999999999999999
Q ss_pred hhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheee
Q 013044 375 PLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCA 447 (451)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (451)
+.+.++.+...+....++. .++.+..+....+.+..++. ..+....++++. |++.++++.++.+
T Consensus 271 ~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~q~l~g~~~~~---~~~~~~~~i~~~-~~~~~~~~q~~~~ 334 (382)
T TIGR00902 271 DLLLISAIACVGRWAIIGA-----IEAFPLIFLLQILHCGTFAV---CHLAAMRYIAAQ-PGSEIAKLQALYN 334 (382)
T ss_pred HHHHHHHHHHHHHHHHHHh-----HhhHHHHHHHHHHHHHHHHH---HHHHHHHHHHhC-CHhhHHHHHHHHH
Confidence 9999888888887766543 25556666667777777777 455556667777 8888887777643
|
This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules. |
| >PRK15011 sugar efflux transporter B; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-25 Score=209.27 Aligned_cols=313 Identities=14% Similarity=0.074 Sum_probs=196.7
Q ss_pred hhccccccccccccc-ccCCCCCCcccccCCchhHHHHHHHHHH-HHHHHHHHHhhhhhhhcchHHH-HHHHHHHHHHHH
Q 013044 63 LYGYDIGSTSCATIS-IESPTLSGISWYDLSSVEIGLITSGSLY-GALIGSILAFNIADILGRRREL-ILAALLYLVGAL 139 (451)
Q Consensus 63 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~~-~~~~~l~~~~~~ 139 (451)
+.+.......+.+|. +.++ +|++++++|++.+...+ ++.++.++.++ +||+||||.+ ..+.++.+++..
T Consensus 26 ~~~~~~~~~~p~~~~~l~~~-------~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~ 97 (393)
T PRK15011 26 LTGIAGALQTPTLSIFLTDE-------VHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACT 97 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHH
Confidence 333344444555555 4556 89999999999876655 55566655555 9999999875 456666678888
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCc--chHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHH
Q 013044 140 VTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMR--GQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMY 217 (451)
Q Consensus 140 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f 217 (451)
+.+++++++.+++.+.+.|...+...|...+++.|+.++++| +...++.+++.++|.++||++++.+.++. |||+.|
T Consensus 98 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~-gw~~~f 176 (393)
T PRK15011 98 LFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGF-SFTVMY 176 (393)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhc-ChHHHH
Confidence 888999999887666655555567788888888888876655 34457888999999999999999999887 999999
Q ss_pred hhhHHHHHHH-HHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccc
Q 013044 218 GASTPLAVIM-GMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVS 296 (451)
Q Consensus 218 ~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (451)
++.++..++. +...+++||+++. ++ + + ++ +...
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~---~~---~-~--------------------------------------~~-~~~~ 210 (393)
T PRK15011 177 LSAAVAFIVCGVMVWLFLPSMRKE---LP---L-A--------------------------------------TG-TLEA 210 (393)
T ss_pred HHHHHHHHHHHHHHHhhcCccCCC---Cc---c-c--------------------------------------cc-cccc
Confidence 9998877774 4445557776420 00 0 0 00 0000
Q ss_pred hhhhhccc-chhHHHHHHHHHHHHHhhchhHHHHhHHHHHH-HcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCc
Q 013044 297 LREVFHGK-CLKALIIGAGLVLFQQITGQPSVLYYAASILQ-SAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRR 374 (451)
Q Consensus 297 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~ 374 (451)
. .+++ .....+...... .........+.|.+++ +.++ +..+.+.......++.+++.++.|+++||++||
T Consensus 211 ~---~~~~~~~~~~~~~~~~~----~~~~~~~~~~~p~~l~~~~~~-~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~ 282 (393)
T PRK15011 211 P---RRNRRDTLLLFVICTLM----WGTNSLYIINMPLFIINELHL-PEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKR 282 (393)
T ss_pred c---ccccccHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH
Confidence 0 0010 111111111111 1222334456776664 5677 777888888777788889999999999999999
Q ss_pred hhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheee
Q 013044 375 PLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCA 447 (451)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (451)
+.+..+.....+....+. . .++.+..++...+.....+. ..+....+..|..|++ ++++.++.+
T Consensus 283 ~~~~~~~~~~~~~~~~~~---~--~~~~~~~l~~~~l~~~~~g~---~~~~~~~~~~~~~p~~-~g~~~~~~~ 346 (393)
T PRK15011 283 FLMRVAAVAGVCFYAGML---M--AHSPAILLGLQLLNAIYIGI---LGGIGMLYFQDLMPGQ-AGSATTLYT 346 (393)
T ss_pred HHHHHHHHHHHHHHHHHH---H--HhhHHHHHHHHHHHHHHHHH---HHHHHHHHHHHhCCCC-cchHHHHHH
Confidence 877665544433322221 1 12333333333333333332 1222334557777764 777776543
|
|
| >PRK11010 ampG muropeptide transporter; Validated | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-25 Score=215.58 Aligned_cols=329 Identities=15% Similarity=0.084 Sum_probs=219.0
Q ss_pred HhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhh-----cchHH-HHHHHH
Q 013044 59 LGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADIL-----GRRRE-LILAAL 132 (451)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~~-~~~~~~ 132 (451)
+.++..+......++.+|...++ .|.+..++|.+ +.....+ ++.+++|+++||+ ||||. ++.+.+
T Consensus 19 ~l~~~~gl~~~~~~~~l~~~l~~-------~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i 89 (491)
T PRK11010 19 ILGFASGLPLALTSGTLQAWMTV-------ENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQL 89 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-------CCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHH
Confidence 33455666666777888887776 68899999987 3344444 6899999999999 99985 667777
Q ss_pred HHHHHHHHHHHh---hhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhccc
Q 013044 133 LYLVGALVTALA---PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL 209 (451)
Q Consensus 133 l~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~ 209 (451)
+.+++..+.++. ++++.+.+.+++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++.++.+.
T Consensus 90 ~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~ 169 (491)
T PRK11010 90 LLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADR 169 (491)
T ss_pred HHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 777887777775 47889999999999999999999999999999999999999999999999999999999999883
Q ss_pred ccchhHHHhhhHHHHHHHHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhccc
Q 013044 210 VAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYV 289 (451)
Q Consensus 210 ~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (451)
..|||..|++.+++.++..+..+++||+++.. + +. ++.
T Consensus 170 ~~GWr~~f~i~a~l~ll~~l~~~~~~e~~~~~---~-----~~-~~~--------------------------------- 207 (491)
T PRK11010 170 YLGWQGMYWLMAALLIPCIIATLLAPEPTDTI---P-----VP-KTL--------------------------------- 207 (491)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHhcCCCcccc---c-----cc-cch---------------------------------
Confidence 23999999999988777666555677764310 0 00 000
Q ss_pred ccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHH-HHHcCCCCchhHHHHH-HHHHHHHHHHHHHHHHH
Q 013044 290 GEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASI-LQSAGFSAASDATRVS-ILLGLFKLIMTGLAVLV 367 (451)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~-~~~~~~~~~~~~~~g~l 367 (451)
++....++++.++++..+......++.... ......+.+.+ .++.|+ +..+.+... ....++.+++.++.|++
T Consensus 208 ~~~~~~~l~~~~~~~~~~~~ll~~~l~~~~----~~~~~~~~~~~l~~~~G~-s~~~~g~~~~~~g~i~~iiG~ll~G~L 282 (491)
T PRK11010 208 EQAVVAPLRDFFGRNNAWLILLLIVLYKLG----DAFAMSLTTTFLIRGVGF-DAGEVGLVNKTLGLLATIVGALYGGIL 282 (491)
T ss_pred hhhHHHHHHHHHcCcCHHHHHHHHHHHHHH----HHHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000011344555544433333322222211 12223344444 456888 888888887 46668999999999999
Q ss_pred hhhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheee
Q 013044 368 VERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCA 447 (451)
Q Consensus 368 ~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (451)
+||+++|+.+..+.++..++.+.+..... ..++.+......++...+.+. +. +....+..+..+++.+++..++.+
T Consensus 283 ~dr~g~~~~l~i~~~l~~l~~l~~~~l~~-~~~~~~~l~~~~~l~~~~~g~--~~-~~~~a~~~~l~~~~~~~t~~gl~~ 358 (491)
T PRK11010 283 MQRLSLFRALMIFGILQGVSNAGYWLLSI-TDKNLYSMGAAVFFENLCGGM--GT-AAFVALLMTLCNKSFSATQFALLS 358 (491)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHh-ccccHHHHHHHHHHHHHHHHH--HH-HHHHHHHHHHcCCCCcHHHHHHHH
Confidence 99999988776655544444333222111 112222322233332223333 11 223455566667766666666544
|
|
| >PRK11128 putative 3-phenylpropionic acid transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-25 Score=208.44 Aligned_cols=314 Identities=16% Similarity=0.102 Sum_probs=220.5
Q ss_pred hcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcch----HHHHHHHHHHHHHHH
Q 013044 64 YGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRR----RELILAALLYLVGAL 139 (451)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr----~~~~~~~~l~~~~~~ 139 (451)
+....+...|.+|...++ +|.|..++|++.+++.++..++++++|+++||+||| +.+.++..+. ...
T Consensus 16 ~~~~~g~~~p~l~~~l~~-------~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~ 86 (382)
T PRK11128 16 YFFAYGVFLPFWSVWLKG-------QGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVA 86 (382)
T ss_pred HHHHHHHHhhhHHHHHHh-------cCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHH
Confidence 334456777888888877 899999999999999999999999999999999984 3333322222 223
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhh
Q 013044 140 VTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGA 219 (451)
Q Consensus 140 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~ 219 (451)
.....+++|.+++.|++.|++.+...+...+++.++ .++|+++.+......++|.++||++++++.++. |||..|++
T Consensus 87 ~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~-g~~~~f~~ 163 (382)
T PRK11128 87 FWFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWF-GEQAILWI 163 (382)
T ss_pred HHHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHc-ChhHHHHH
Confidence 344468899999999999999999999888888877 356888899999999999999999999999987 99999988
Q ss_pred hHHHHHHHHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhh
Q 013044 220 STPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLRE 299 (451)
Q Consensus 220 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (451)
.++..++..+..++.||+++. . ++ ++ ..++...++++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~----~--~~-------~~------------------------------~~~~~~~~~~~ 200 (382)
T PRK11128 164 LTAGVASMLLGQLLRPTIMPQ----G--ES-------RQ------------------------------QESAGWPAWKA 200 (382)
T ss_pred HHHHHHHHHHHHHccCCCCCc----c--cc-------cc------------------------------ccccccchHHH
Confidence 776555444433444443210 0 00 00 00011234677
Q ss_pred hhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhc
Q 013044 300 VFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLG 379 (451)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~ 379 (451)
+++++..+......++.... ......+.+.++++.|. +..+.+.......++.++..++.+++.||+++|+.+..
T Consensus 201 i~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~g~-s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~ 275 (382)
T PRK11128 201 LLKEPTVWRFLLCVSLLQGS----HAAYYGFSAIYWQAAGY-SASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLL 275 (382)
T ss_pred HHcChhHHHHHHHHHHHHHH----hHhHHHHHHHHHHHCCC-CHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
Confidence 77776555544433333222 22344556677778888 78888999888899999999999999999999999888
Q ss_pred hhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhhee
Q 013044 380 GVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYC 446 (451)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (451)
+....+++.++++. .++.+..++..++.+.+++. ..+....+..+.. ++++++..++.
T Consensus 276 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~g~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~ 333 (382)
T PRK11128 276 SAICGVVRWGLMGS-----TTALPWLIVIQILHCGTFTV---CHLAAMRYIAARP-GSEVIRLQALY 333 (382)
T ss_pred HHHHHHHHHHHHHh-----hhhHHHHHHHHHHHHHHHHH---HHHHHHHHHHHCC-HhhhHHHHHHH
Confidence 88777776554432 24556666666666666665 3444445555554 44456655543
|
|
| >TIGR00805 oat sodium-independent organic anion transporter | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.3e-26 Score=223.17 Aligned_cols=303 Identities=15% Similarity=0.197 Sum_probs=215.8
Q ss_pred HHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHH
Q 013044 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (451)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~ 134 (451)
+..++..+......+..+..++.++++ |+++..+.|++.+.+.++++++.++.++++||+|||+++.++.+++
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek~-------F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~ 108 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIERR-------FKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIM 108 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhh-------hCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHH
Confidence 334455666667778889999999998 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh---------------------------------------------------hHHHHHHHHHHHHHHHhh
Q 013044 135 LVGALVTALAP---------------------------------------------------DFIIMVVGRFVFGIGIGL 163 (451)
Q Consensus 135 ~~~~~~~~~~~---------------------------------------------------~~~~l~~~r~l~G~~~~~ 163 (451)
+++++++++.+ .+..++++|+++|+|.+.
T Consensus 109 ~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~ 188 (633)
T TIGR00805 109 GLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATP 188 (633)
T ss_pred HHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCc
Confidence 99999998763 256778999999999999
Q ss_pred hhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccc---------------------cchhHHHhhhHH
Q 013044 164 AMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV---------------------AGWRYMYGASTP 222 (451)
Q Consensus 164 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~---------------------~~wr~~f~~~~~ 222 (451)
..+...+++.|++|+++|+++++++..+..+|.++|+++++++.+.. +.||..|++.++
T Consensus 189 ~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~ 268 (633)
T TIGR00805 189 IFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGG 268 (633)
T ss_pred chhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999887532 127777888888
Q ss_pred HHHHHHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhc
Q 013044 223 LAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFH 302 (451)
Q Consensus 223 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (451)
+.++..+.++++|++.+.. .++++.+ .++.+. . +...++. ...... ...+....++.+++
T Consensus 269 l~~l~~v~l~~~p~~lp~~---~~~~~~~----~~~~~~----~-~~~~~~~-~~~~~~-------~~~~~~~~~~~Ll~ 328 (633)
T TIGR00805 269 VALLTSIPFFFFPKALPKE---GKRVNVD----VHETEK----L-EKSEDKS-RKKNSD-------ITKDFPKIIKRLLC 328 (633)
T ss_pred HHHHHHHHHHhCccccCCc---ccccchh----hhhhhc----c-ccccccc-chhhhh-------hHHHHHHHHHHHHc
Confidence 8777555566666542100 0000000 000000 0 0000000 000000 00011224556777
Q ss_pred ccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHH-cCCCCchhHHHHHHHHHH-HHHHHHHHHHHHhhhcCC--chhhh
Q 013044 303 GKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGL-FKLIMTGLAVLVVERLGR--RPLLL 378 (451)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~g~--~~~~~ 378 (451)
++......+ ..+........+..|.|.++++ .|+ ++.+++.+.....+ +.+++.+++|+++||++. |+.+.
T Consensus 329 n~~f~~~~l----~~~~~~~~~~~~~~~lP~yl~~~~g~-s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~ 403 (633)
T TIGR00805 329 NPIYMLVIL----AQVIDSLAFNGYITFLPKYLENQYGI-SSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAY 403 (633)
T ss_pred CcHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHcCC-cHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHH
Confidence 654333333 3333333455677788888874 688 88889888887766 678999999999999984 45555
Q ss_pred chhHHHHHHHH
Q 013044 379 GGVSGIVISLF 389 (451)
Q Consensus 379 ~~~~~~~~~~~ 389 (451)
.+.+...++.+
T Consensus 404 ~~~~~~~~~~~ 414 (633)
T TIGR00805 404 FAICLSTLSYL 414 (633)
T ss_pred HHHHHHHHHHH
Confidence 55555555443
|
Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange. |
| >PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.7e-25 Score=236.61 Aligned_cols=308 Identities=17% Similarity=0.053 Sum_probs=216.0
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHH---HhhhHHHHHHHHHHHHHHHhhhhhhH
Q 013044 92 SSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTA---LAPDFIIMVVGRFVFGIGIGLAMHAA 168 (451)
Q Consensus 92 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~---~~~~~~~l~~~r~l~G~~~~~~~~~~ 168 (451)
+....+++.+++.+++.++++++|+++||+|||++++++.++.+++.++.. ..++++.++++|+++|++.+...+..
T Consensus 45 ~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 124 (1146)
T PRK08633 45 QVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAK 124 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHH
Confidence 345679999999999999999999999999999999998877666655544 45789999999999999999999999
Q ss_pred HHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhccc--------ccchhHHHhhhHHHHHH-HHHHhhcccCchH
Q 013044 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL--------VAGWRYMYGASTPLAVI-MGMGMWWLPASPR 239 (451)
Q Consensus 169 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~--------~~~wr~~f~~~~~~~~~-~~~~~~~~~e~~~ 239 (451)
.+++.|++|+++|++++++...+..+|.++|+++++++.+. ..+|++.+.+..+...+ .++..+.+||.|+
T Consensus 125 ~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (1146)
T PRK08633 125 YGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPA 204 (1146)
T ss_pred HhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCC
Confidence 99999999999999999999999999999999999998765 32455555544443333 4445556677654
Q ss_pred HHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhcccchhHHHHHHHHHHHH
Q 013044 240 WLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQ 319 (451)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (451)
....+. +... ... .......++.+++++..+..++...+..+.
T Consensus 205 ~~~~~~-----~~~~---------------------~~~-----------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 247 (1146)
T PRK08633 205 AAPEVF-----DKKK---------------------YLF-----------PKLLWRNLKLLRSDRVLWLAIIGLSYFWFI 247 (1146)
T ss_pred CCcccc-----cccc---------------------ccc-----------HHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 210000 0000 000 000012344555555444443333333222
Q ss_pred HhhchhHHHHhHHHHH-HHcCCCCch-hHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhhhc
Q 013044 320 QITGQPSVLYYAASIL-QSAGFSAAS-DATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLF 397 (451)
Q Consensus 320 ~~~~~~~~~~~~~~~~-~~~~~~s~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (451)
......+.|.++ +..|. +.. ..+++.....++.+++.++.+++.||+++++.+.++.++.+++.+++...
T Consensus 248 ----~~~~~~~~~~~~~~~~g~-s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~--- 319 (1146)
T PRK08633 248 ----SQLAQANFPAYAKEVLGL-DNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTA--- 319 (1146)
T ss_pred ----HHHHHHhhHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHh---
Confidence 223344555555 45687 777 88999999999999999999999999999888877777666666555432
Q ss_pred cCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheeeee
Q 013044 398 LDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCAKL 449 (451)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (451)
.+.+..++..++++.+.+. ..+....+..+..|++.|+++.++.+.+
T Consensus 320 --~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~p~~~rg~~~~~~~~~ 366 (1146)
T PRK08633 320 --PSLASVLVLFFLFGFSAGL---FIVPLNALIQFRAPEKELGKVLAANNFL 366 (1146)
T ss_pred --hhHHHHHHHHHHHHHHHHH---hhHHHHHHHhhcCCccchhhhhHHHHHH
Confidence 2344444555555555554 3445567778888999999988876543
|
|
| >COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.3e-24 Score=187.63 Aligned_cols=329 Identities=19% Similarity=0.189 Sum_probs=254.0
Q ss_pred HHHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHH
Q 013044 54 FLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALL 133 (451)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l 133 (451)
++.+....++.|+......+.+|++.+. |+++..+.+++..+++.++.+++++.|++.+|+|+|+-+++|+.+
T Consensus 15 ~v~~t~lFfl~G~~~~l~diLip~l~~~-------f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l 87 (422)
T COG0738 15 FVLLTSLFFLWGFITCLNDILIPHLKEV-------FDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLL 87 (422)
T ss_pred HHHHHHHHHHHHHHhhcchhhHHHHHHH-------hCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHH
Confidence 3445555677788888889999999988 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH---HhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhccc-
Q 013044 134 YLVGALVTA---LAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL- 209 (451)
Q Consensus 134 ~~~~~~~~~---~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~- 209 (451)
.++|+.+.. ...++..++.+-++.|.|.+...+....++....++++..+.+++.+...++|.+++|++++.+...
T Consensus 88 ~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~ 167 (422)
T COG0738 88 YAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSG 167 (422)
T ss_pred HHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhh
Confidence 999999995 5678999999999999999999999999999999999999999999999999999999999988762
Q ss_pred -----------------ccchhHHHhhhHHHHHHHHHHhhcc--cCchHHHHHhhccccCCccchHHHHHHHHHHHhCCC
Q 013044 210 -----------------VAGWRYMYGASTPLAVIMGMGMWWL--PASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQS 270 (451)
Q Consensus 210 -----------------~~~wr~~f~~~~~~~~~~~~~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (451)
...||++|...+...+++.+..... |+.+.-.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~----------------------------- 218 (422)
T COG0738 168 VALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAA----------------------------- 218 (422)
T ss_pred hhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCccc-----------------------------
Confidence 1247888888777766655544443 3322100
Q ss_pred CCCCCchhHHHHHHhhcccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHH-cCCCCchhHHHH
Q 013044 271 IGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRV 349 (451)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~ 349 (451)
+...+.++....+++++++.+...+..+++...+. ....|++.++.+ .|. +..++...
T Consensus 219 ----------------~~~~~~~~~~~~~l~~~~~~~~gvl~~FlYVG~Ev----a~gsfl~~y~~~~~g~-~~~~aa~~ 277 (422)
T COG0738 219 ----------------PSLGASGSAGLSSLFQNKHLRLGVLAIFLYVGAEV----AIGSFLVSYLEELLGL-NEQQAAYY 277 (422)
T ss_pred ----------------ccccccccchHHHHHhChHHHHHHHHHHHHHhHHH----HHHHHHHHHHHhcCCc-cHHHHHHH
Confidence 00011111256788888877777777777666654 455677777776 677 89999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeee
Q 013044 350 SILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYH 429 (451)
Q Consensus 350 ~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (451)
.+....+.++|++++.++.+|+...|.+.+..++..+.++..... +. .+.+....+.+.+.+. ..|..+..
T Consensus 278 ~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~-----~g-~v~~~~l~~ig~F~si---mfPTIfsl 348 (422)
T COG0738 278 LSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALI-----GG-VVALYALFLIGLFNSI---MFPTIFSL 348 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHh-----cC-hHHHHHHHHHHHHhHH---HHHHHHHH
Confidence 999999999999999999999998888776665544444433332 22 4444455555566665 67888888
Q ss_pred eecchhhhhhhhhhheeee
Q 013044 430 FRIFFFEMTRIVCSIYCAK 448 (451)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~ 448 (451)
..+..|++....+..++++
T Consensus 349 al~~l~~~ts~~s~~l~ma 367 (422)
T COG0738 349 ALKNLGEHTSVGSGLLVMA 367 (422)
T ss_pred HHhccCccccccceeeeeh
Confidence 8777776655555555544
|
|
| >KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.5e-25 Score=209.60 Aligned_cols=378 Identities=15% Similarity=0.058 Sum_probs=250.1
Q ss_pred CCCccchHHHHHHHHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 013044 42 PENYSVSAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADIL 121 (451)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~ 121 (451)
+..|.|......++ ...+.+|... .++...+.+.++ |+-+.++++|+.++......+..++.+.+.|||
T Consensus 40 dGG~gWvV~~a~fl---~~~~~~g~~~-~~Gv~~~~~~~~-------f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf 108 (509)
T KOG2504|consen 40 DGGWGWVVVFASFL---VNLSTDGLIN-SFGLLFEELMDY-------FGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF 108 (509)
T ss_pred CCCeeeeeeHhHHH---HHHhhhcchh-eehhhHHHHHHH-------hCCCccHHHHHHHHHHHHHHHhccHHHHHHhhc
Confidence 55566544333322 2223444433 335677788877 899999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH-HHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHH
Q 013044 122 GRRRELILAALLYLVGALVTALAPDFIIMVVGR-FVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGY 200 (451)
Q Consensus 122 Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r-~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~ 200 (451)
|.|.+.++|.++..+|.++.++++++|++++.. ++.|+|.|..+......+..+++ ++|+.+.|+..++.++|.++-|
T Consensus 109 g~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~~ 187 (509)
T KOG2504|consen 109 GCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFE-KKRALATGIAVSGTGVGTVVFP 187 (509)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcceeeHH
Confidence 999999999999999999999999999888775 88999999999999999998887 7899999999999999999999
Q ss_pred HHhhhhcccccchhHHHhhhHHHHHHHHHHhhcccC-chHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCc---
Q 013044 201 GIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPA-SPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAP--- 276 (451)
Q Consensus 201 ~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 276 (451)
.+...+.+.. |||+.+++.+.+.+-.++....+++ +++.... +.++..+.....+......++...........
T Consensus 188 ~l~~~l~~~~-G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (509)
T KOG2504|consen 188 PLLKYLLSKY-GWRGALLIFGGISLNVLVAGALLRPLSPPKKPN-EEKDLRNSAASVESTPKPVELRISERDSGLKKLSL 265 (509)
T ss_pred HHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCch-hhhhhccccccccccccccccccccCCCCCCcccc
Confidence 9999999998 9999999999988775555444433 2221000 00000000000000000000000000000000
Q ss_pred hhHHHHHHhhcccc--cccccc---hhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHH
Q 013044 277 TEVDEILTELSYVG--EDKEVS---LREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSI 351 (451)
Q Consensus 277 ~~~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 351 (451)
.......+..++.. ..+... ..+++++ +.++...+.......++.....++|.+.++.++ +..++.....
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~----~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~-~~~~aa~l~S 340 (509)
T KOG2504|consen 266 SNLATLKRGPDKWRNSPLQAFLSMLDLSLLKD----PKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGL-SSNDAAFLLS 340 (509)
T ss_pred cchhhhhhCCccccccchhhhhhhhhHHHHcC----chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-ChhhhHHHHH
Confidence 00111111111111 111111 1455665 444445555555566677888899999999999 9999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCch--hhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeee
Q 013044 352 LLGLFKLIMTGLAVLVVERLGRRP--LLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYH 429 (451)
Q Consensus 352 ~~~~~~~~~~~~~g~l~d~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (451)
..++..++++++.|++.|+...++ ...++.+..+++.+.+.. .+..+.......+++.+.+. +.......
T Consensus 341 iigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~-----~~~~~~l~~~~~~fG~~~g~---~~~l~~~i 412 (509)
T KOG2504|consen 341 IIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPF-----ATTYVGLIVFSILFGFCVGS---FSSLTPVI 412 (509)
T ss_pred HHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHH-----hccHHHHHHHHHHHHHHHHH---HHHHHHHH
Confidence 999999999999999999988443 444444444444433322 23444555555555665554 45555566
Q ss_pred eecchhhhhhhhhhhee
Q 013044 430 FRIFFFEMTRIVCSIYC 446 (451)
Q Consensus 430 ~~~~~~~~~~~~~~~~~ 446 (451)
..++.+.+.-..+.|+.
T Consensus 413 ~~~~~g~~~l~~a~Gl~ 429 (509)
T KOG2504|consen 413 LVDLVGLEKLSNAYGLL 429 (509)
T ss_pred HHHHcChhhcchHHHHH
Confidence 77777777666665543
|
|
| >PRK11902 ampG muropeptide transporter; Reviewed | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-23 Score=199.35 Aligned_cols=326 Identities=18% Similarity=0.089 Sum_probs=225.0
Q ss_pred HHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhh-----cchH-HHHHHH
Q 013044 58 ALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADIL-----GRRR-ELILAA 131 (451)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~-~~~~~~ 131 (451)
..-++.++...+.....+|...++ .|.+.+++|++..+... .+..+++|+++||+ |||| .+.++.
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~-------~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~ 75 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTV-------EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQ 75 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHH-------cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHH
Confidence 344567777788888888888777 79999999999777776 69999999999999 8875 788888
Q ss_pred HHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcc
Q 013044 132 LLYLVGALVTALA---PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD 208 (451)
Q Consensus 132 ~l~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~ 208 (451)
++.+++..+.++. ++++.+++..++.++..+...+...+++.|++|+++|+++.++...+..+|.++++.+++.+.+
T Consensus 76 ~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~ 155 (402)
T PRK11902 76 VGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLAD 155 (402)
T ss_pred HHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence 8888888887776 3578888888888999999999999999999999999999999999999999999999999887
Q ss_pred cccchhHHHhhhHHHHHHHHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcc
Q 013044 209 LVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSY 288 (451)
Q Consensus 209 ~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (451)
...|||..|++.+++.++..+..++.||+++.. + ++ ++.
T Consensus 156 ~~~gw~~~f~i~a~~~l~~~l~~~~~~e~~~~~---~--~~-------~~~----------------------------- 194 (402)
T PRK11902 156 RVLGWGNTYLLMAGLMLAGALTTLWAPEPEVPA---R--PP-------RSL----------------------------- 194 (402)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHhcCCCcccc---c--cc-------chh-----------------------------
Confidence 534999999998888776555556667654310 0 00 000
Q ss_pred cccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHH-HHHHHHHHHHHHH
Q 013044 289 VGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLG-LFKLIMTGLAVLV 367 (451)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~-~~~~~~~~~~g~l 367 (451)
.++.+.+++++++++..+..++...+....... ......+.+.++.|+ +..+.+......+ ++.+++.++.+++
T Consensus 195 -~~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~---~~~~~~~~l~~~~G~-~~~~~g~~~~~~~~~~~i~g~~~~g~l 269 (402)
T PRK11902 195 -GEAVVGPLRDFFSRRGAWALLLLIVLYKLGDAF---AGSLSTTFLIRGAGF-SAGEVGIVNKTLGLAATIVGALAGGTL 269 (402)
T ss_pred -HHHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHH---HHHHHHHHHHHhcCC-CHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 000112355677776666555444333332211 112233445566788 8888888776554 5689999999999
Q ss_pred hhhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHH----HHHhhccccCCCceeeeeeecchhhhhhhhh
Q 013044 368 VERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLL----YVGCYQVIKNFNPSKIYHFRIFFFEMTRIVC 442 (451)
Q Consensus 368 ~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (451)
.||+++|+.+..+..+..+..+.+...... .++.+.......+ .+...+. .......++.+.+|.+..+..
T Consensus 270 ~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~ 344 (402)
T PRK11902 270 MVRLGLYRSLMLFGVLQAVSNLGYWVLAVT-PKHLWTMALAIGIENLCGGMGTAA---FVALLMALCNRSFSATQYALL 344 (402)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHHHHHHHHHHHHHHH---HHHHHHHhcCCCCcHHHHHHH
Confidence 999999888766665555443333221111 1233333333222 2222222 355556677777777766643
|
|
| >PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-24 Score=230.30 Aligned_cols=308 Identities=13% Similarity=-0.005 Sum_probs=214.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHH---HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHH
Q 013044 94 VEIGLITSGSLYGALIGSILAFNIADILGRRRELIL---AALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPM 170 (451)
Q Consensus 94 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~---~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 170 (451)
...++..+++.+.++++++++|+++||+|||+++.. +.++..+..+.....++++.++++|+++|++.+...|+..+
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a 131 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYS 131 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHH
Confidence 557889999999999999999999999999997533 32333333333444589999999999999999999999999
Q ss_pred HHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhhcccCchHHHHHhhccccC
Q 013044 171 YIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKG 250 (451)
Q Consensus 171 ~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 250 (451)
++.|++++++|++++++.+++.++|.++||++++++.+.. +|++.|+..++..++.+++.+++|+++.. +. ..+.
T Consensus 132 ~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~ 206 (1140)
T PRK06814 132 ILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISG-NFVILVALLMGIAVLGWLASLFIPKTGNA---AP-DLKI 206 (1140)
T ss_pred hhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhcc-ccHHHHHHHHHHHHHHHHHHhhCCCCCCC---CC-CCee
Confidence 9999999999999999999999999999999999999887 99999955555555555666667665320 00 0000
Q ss_pred CccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHh
Q 013044 251 DMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYY 330 (451)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (451)
+. ... ++....++.+.+++..+...+...+..+. ...+..+
T Consensus 207 ~~------------------------~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 247 (1140)
T PRK06814 207 DR------------------------NII-----------RSTITLLKYAKADKRIWLAILGISWFWLV----GAVVLSQ 247 (1140)
T ss_pred cc------------------------chH-----------HHHHHHHHHHhcCchHHHHHHHHHHHHHH----HHHHHHH
Confidence 00 000 00011345555655555544443333322 2344456
Q ss_pred HHHHHHH-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhh--------------
Q 013044 331 AASILQS-AGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYY-------------- 395 (451)
Q Consensus 331 ~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~-------------- 395 (451)
.|.++++ .|. +....+.+.+...++.+++.++.+++.|+..+++.+..+.++.+++.+.+++..
T Consensus 248 ~p~~~~~~~g~-~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 326 (1140)
T PRK06814 248 LPLLAKETLGG-DENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSIL 326 (1140)
T ss_pred hHHHHHHHcCC-chHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchh
Confidence 7777665 577 888999999999999999999999999888776666555555544444333210
Q ss_pred -hccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheeeee
Q 013044 396 -LFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCAKL 449 (451)
Q Consensus 396 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (451)
.....+.|...+..++++.+.+. ..+...+++.+..|++.+|.+.|+.+.+
T Consensus 327 ~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~p~~~~G~v~g~~~~~ 378 (1140)
T PRK06814 327 VFLSKRHGWRILIDLFGLAAAGGL---YIVPLFAALQAWANPAHRARVIAANNVL 378 (1140)
T ss_pred hhhcccccHHHHHHHHHHHHHHHH---hHHHHHHHHHhhCCcccceeeeHHHHHH
Confidence 00113445555555555555554 4445677888899999999988876543
|
|
| >TIGR00806 rfc RFC reduced folate carrier | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.1e-24 Score=196.89 Aligned_cols=325 Identities=17% Similarity=0.148 Sum_probs=213.4
Q ss_pred cccccccccccccCCCCCCcccccCCchh-HHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhh
Q 013044 67 DIGSTSCATISIESPTLSGISWYDLSSVE-IGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP 145 (451)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~ 145 (451)
-+...+.+.|.+.++ +|+++++ .|.+.++++.+|++++++.|+++||+|.|+++.++.+.+++..++.++++
T Consensus 41 ~R~n~s~a~p~L~~e-------lglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~ 113 (511)
T TIGR00806 41 FRPGESFITPYLLTV-------LNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGT 113 (511)
T ss_pred hhchHHHHHHHHHHH-------cCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH
Confidence 366677788888888 9999999 99999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhh---HH
Q 013044 146 DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGAS---TP 222 (451)
Q Consensus 146 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~---~~ 222 (451)
++..+.+.|++.|++.|+.. ....++..|+|+++|+++.++..++..+|.++++++++++ ... |||+.+.+. ..
T Consensus 114 Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll-~s~-gWr~y~~Ln~Isl~ 190 (511)
T TIGR00806 114 SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL-VTL-GWISYSTLNIISLV 190 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhc-CchhHHHHHHHHHH
Confidence 99999999999999999999 9999999999999999999999999999999999999994 445 899866543 33
Q ss_pred HHHHHHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhc
Q 013044 223 LAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFH 302 (451)
Q Consensus 223 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (451)
...+.++..+++|..++.+.-++++.+.+ .. ..+.....+++. ....+.........-..-...+++..+
T Consensus 191 s~~~a~~~a~~LP~~~~sl~f~~~~~~~~-----~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~y~ 260 (511)
T TIGR00806 191 FMTFSVFLALFLKRPKRSLFFNRLEDVRG-----AL----PCELDQMVPGPG-GKLEDYLGTCRDSFLVRMLSELVTIYR 260 (511)
T ss_pred HHHHHHHHHHhCCCCchhhhhcccccccc-----cc----ccccccCCCCCc-cccchhhhhhhhHHHHHHHHHHHHHhc
Confidence 34445666778886665443322110000 00 000000000000 000000000000000000112222333
Q ss_pred ccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhH
Q 013044 303 GKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVS 382 (451)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~ 382 (451)
+ +.++...+++.....+++-+.+|...+.+...-....--|..-++..+.+.+..+..|++-.+..+-..+.++..
T Consensus 261 n----~~vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~ 336 (511)
T TIGR00806 261 N----PQLLLWSLWWVFNSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVV 336 (511)
T ss_pred C----cchhhhhHHHHHHhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHH
Confidence 3 333334455555566667777888777766543122245556666777777788888887444433222333222
Q ss_pred HHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhcc
Q 013044 383 GIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQV 418 (451)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (451)
...-+.++ +.....++.|+..+..+++...|.+
T Consensus 337 s~~~~gll---~~m~~t~~Iw~~Y~~yvlf~~~y~f 369 (511)
T TIGR00806 337 SAIQAGLV---FWMSQSHDIWVLYVTYVLFRGIYQF 369 (511)
T ss_pred HHHHHHHh---hhhhcccchHHHHHHHHHHHHHHHH
Confidence 22222111 1112256778888888888888876
|
Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined. |
| >KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-24 Score=189.15 Aligned_cols=319 Identities=20% Similarity=0.156 Sum_probs=200.3
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHH
Q 013044 90 DLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAP 169 (451)
Q Consensus 90 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 169 (451)
+.+....|++.+.|.+...+.++.+|.++||+|||.++++|++..++..++.+.++|+..++++|++.|+..| ...++.
T Consensus 64 ~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kg-nl~v~r 142 (451)
T KOG2615|consen 64 GASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKG-NLSVIR 142 (451)
T ss_pred cccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC-chHHHH
Confidence 4566778999999999999999999999999999999999999999999999999999888888999999988 777889
Q ss_pred HHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcc---cccchhHHHh----hhHHHHHH-HHHHhhcccCchHHH
Q 013044 170 MYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD---LVAGWRYMYG----ASTPLAVI-MGMGMWWLPASPRWL 241 (451)
Q Consensus 170 ~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~---~~~~wr~~f~----~~~~~~~~-~~~~~~~~~e~~~~~ 241 (451)
++++|.+++|+|+++++..+.++++|.++||.+|+++.+ .. + +++|. +..+.... .....+++||+-+-.
T Consensus 143 AiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~-g-~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~r 220 (451)
T KOG2615|consen 143 AIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSIS-G-SYPFALPCLLVFILAAGDVTFFPWFLPETLPLR 220 (451)
T ss_pred HHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhh-c-cCchHHHHHHHHHHHHHHHHHHHHhCCccccch
Confidence 999999999999999999999999999999999999987 22 1 22222 22233333 445567789884311
Q ss_pred HHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhcccchhH---HHHHHHHHHH
Q 013044 242 LLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKA---LIIGAGLVLF 318 (451)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 318 (451)
. ++ |.....+++.+.-....+. +........+++..+. .+-.+.+..+
T Consensus 221 k-----~~-~~~~~~~~~~~~~~~~~~~-----------------------~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ 271 (451)
T KOG2615|consen 221 K-----RN-DEHSTLQEAADDRLALLKF-----------------------ARIFKVAALRNPPLLDFISVLRIFGLHYF 271 (451)
T ss_pred h-----hc-ccccchhhhhhhhhhhcch-----------------------hhhhhhhhhcCccccchHHHHHHHHHHHH
Confidence 1 11 1111111111111110000 0000111122221111 1111111111
Q ss_pred HHhhchhHHHHhHHHH-HHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcC--CchhhhchhHHHHHHHHHHHHhh
Q 013044 319 QQITGQPSVLYYAASI-LQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLG--RRPLLLGGVSGIVISLFLLGSYY 395 (451)
Q Consensus 319 ~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g--~~~~~~~~~~~~~~~~~~~~~~~ 395 (451)
.....+....++.+.+ -+..|+ ++.+.|.+....++.+.+......+..+|.. .+-.+..+..++.-..+++..
T Consensus 272 ly~~l~s~~~~t~~~l~~~rfg~-ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~-- 348 (451)
T KOG2615|consen 272 LYLELFSGLENTVLFLTHGRFGY-SSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSL-- 348 (451)
T ss_pred HHHHHHHHHHhhHHHhhcCccCC-ChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhc--
Confidence 1111112233333333 156799 8888898888888888877777777777665 233333322222222222221
Q ss_pred hccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheeeee
Q 013044 396 LFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCAKL 449 (451)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (451)
...+..+.....+..+.... ..+....+.....|++.||+.+|+..++
T Consensus 349 ---~~~~~~l~~~s~l~sf~~A~---~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl 396 (451)
T KOG2615|consen 349 ---ARTPVVLYLGSTLKSFSTAS---VVTCLTSLVHKYGPQSQRGTLNGIFRSL 396 (451)
T ss_pred ---cccchhhhHHHHHHHHHHHH---hhHHHHHHHHhcCCcccchHHHHHHHHH
Confidence 23333344444444333333 5666678888899999999999986543
|
|
| >PRK10207 dipeptide/tripeptide permease B; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-23 Score=202.07 Aligned_cols=344 Identities=10% Similarity=0.009 Sum_probs=211.9
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhh-hcchHHHHHHHHHHHHHHHHHHHhhhHHH-HHHHHHHHHHHHhhhhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADI-LGRRRELILAALLYLVGALVTALAPDFII-MVVGRFVFGIGIGLAMH 166 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~l~~~~~~~~~~~~~~~~-l~~~r~l~G~~~~~~~~ 166 (451)
+|.+.++.+++.+.+.....+..+++|+++|| +||||+++++.++++++.++++++++... ++++|+++|+|.|...+
T Consensus 45 lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~ 124 (489)
T PRK10207 45 LGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKA 124 (489)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccC
Confidence 89999999999999999999999999999999 99999999999999999999999877544 55899999999999999
Q ss_pred hHHHHHHhccCCC--CcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhhcccCchHHHHHh
Q 013044 167 AAPMYIAETAPTP--MRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLC 244 (451)
Q Consensus 167 ~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~ 244 (451)
...+++.|.+|++ +|+++++++..+.++|.++||.+++++.++. |||+.|++.++..++.++.+++.++..+....+
T Consensus 125 ~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~-gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~ 203 (489)
T PRK10207 125 NPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKF-GYSVTYNLCGAGLIIALLVYFACRGMVKDIGSE 203 (489)
T ss_pred CHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhh-ChHHHHHHHHHHHHHHHHHHHHcchhhcccCCC
Confidence 9999999999877 4588999999999999999999999999988 999999986654433444444433221100000
Q ss_pred hccccCCccchHHHHHHH------HHHHhCCCCCCCCchhHHHH---HH---hhcccccccccchhhhhcccchhHHHHH
Q 013044 245 AMKRKGDMQDLRESAISC------LCRLRGQSIGDSAPTEVDEI---LT---ELSYVGEDKEVSLREVFHGKCLKALIIG 312 (451)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (451)
.++++.|..+...-.... ........ . ........ .. ......+. .+.+|++......+
T Consensus 204 ~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~i~~~~f~~~~~~~-----~~~~r~r~~~~~~l- 274 (489)
T PRK10207 204 PDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNV--E-VANLVLIVLSIVVTIIFFREAFKL-----DKTGRNKMFVAFVL- 274 (489)
T ss_pred CCccchhhhhHHHHHHHHHHHHHHHHHHHhhh--h-HHHHHHHHHHHHHHHHHHHHHhcC-----CHHHHHHHHHHHHH-
Confidence 000011111110000000 00000000 0 00000000 00 00000000 13344322121111
Q ss_pred HHHHHHHHhhchhHHHHhHHHHHHH-cCCCC----chhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchh-------hhch
Q 013044 313 AGLVLFQQITGQPSVLYYAASILQS-AGFSA----ASDATRVSILLGLFKLIMTGLAVLVVERLGRRPL-------LLGG 380 (451)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s----~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~-------~~~~ 380 (451)
++.....+..+....+..+.+.++ .+. + ......+.....+..++..++.+++.||.++|+. +.+|
T Consensus 275 -~~~~~~f~~~~~q~~~~l~l~~~~~~~~-~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G 352 (489)
T PRK10207 275 -MLEAVVFYILYAQMPTSLNFFAINNVHH-EILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLG 352 (489)
T ss_pred -HHHHHHHHHHHHHcccHHHHHHHHhccc-cccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHH
Confidence 111111122222333344444442 222 1 1133445455556677788888999999998863 6667
Q ss_pred hHHHHHHHHHHHHh---hhcc--CCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheee
Q 013044 381 VSGIVISLFLLGSY---YLFL--DDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCA 447 (451)
Q Consensus 381 ~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (451)
+++.+++++.++.. .... ..+.|+.+...++.+.+... ..|....++.+..|++.++.++++..
T Consensus 353 ~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~---~~~~g~~~~~~~aP~~~~g~~~g~~~ 421 (489)
T PRK10207 353 MFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELF---ISALGLAMIAALVPQHLMGFILGMWF 421 (489)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHH---HhHHHHHHHHHhChHHHHHHHHHHHH
Confidence 77766666543211 1111 12345566666677777776 67777888888899999999988754
|
|
| >PRK09528 lacY galactoside permease; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.9e-23 Score=196.65 Aligned_cols=306 Identities=15% Similarity=0.068 Sum_probs=185.1
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHH---Hhh-----hHHHHHHHHHHHHHH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTA---LAP-----DFIIMVVGRFVFGIG 160 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~---~~~-----~~~~l~~~r~l~G~~ 160 (451)
+|+++.++|++.+++.++..+++++.|+++||+|||++++++..+.+++..... .++ .+...++++++.|.+
T Consensus 41 ~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (420)
T PRK09528 41 NGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFG 120 (420)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 799999999999999999999999999999999999999887666655443221 111 111123334444443
Q ss_pred HhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhhccc-CchH
Q 013044 161 IGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLP-ASPR 239 (451)
Q Consensus 161 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~-e~~~ 239 (451)
.....+....+..+. .++++..++......++|..++|++++.+.+. +|++.|++.+++.++..+..++.+ |+++
T Consensus 121 ~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~--~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 196 (420)
T PRK09528 121 FLAGAGAIEAYIERV--SRRSGFEYGRARMWGSLGWALCAFIAGILFNI--NPQINFWLGSGSALILLVLLFFAKPDAPS 196 (420)
T ss_pred hccchhhhhhHHHHH--HhhccccchhhHHhhhHHHHHHHHHHHHHHhc--CchHhHHHHHHHHHHHHHHHhcccccccc
Confidence 333333333333222 34678888999999999999999999988764 899999998888777555555443 3322
Q ss_pred HHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhcccchhHHHHHHHHHHHH
Q 013044 240 WLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQ 319 (451)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (451)
....++ ++. . ..++....+..+.++++..+...+........
T Consensus 197 ~~~~~~-----------~~~------------~---------------~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~ 238 (420)
T PRK09528 197 TAKVAN-----------ALG------------A---------------NASAVSLKDALALLKLPKFWFLVLYVIGVACF 238 (420)
T ss_pred hhhhcc-----------chh------------c---------------ccccccHHHHHHHccCCCeEeehHHHHHHHHH
Confidence 100000 000 0 00000111233455655444333322222211
Q ss_pred HhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhhhccC
Q 013044 320 QITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLD 399 (451)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (451)
..........|...+..+.+. +....+.......++..++.++.|++.||+|+|+.+..+..+..++.++++. .
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~-----~ 312 (420)
T PRK09528 239 YDVFDQQFPNFFASFFATPEQ-GTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGF-----A 312 (420)
T ss_pred HHHHHHHHHHHHHHHHhccCc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHh-----c
Confidence 111111122222222223344 5567788888888999999999999999999999988877777776665543 2
Q ss_pred CcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhhe
Q 013044 400 DVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIY 445 (451)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (451)
++++..+....+.+...+. ..+....+..+..|++.+++..+.
T Consensus 313 ~~~~~~~~~~~l~g~~~~~---~~~~~~~~~~~~~~~~~~a~~~~~ 355 (420)
T PRK09528 313 TGPLEVSILKLLHAFEVPF---LLVGVFKYITLNFDVRLSATIYLV 355 (420)
T ss_pred ccHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHcCccceeeeeee
Confidence 3455544444444444443 233344566777788888776543
|
|
| >TIGR00882 2A0105 oligosaccharide:H+ symporter | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.7e-23 Score=194.56 Aligned_cols=315 Identities=14% Similarity=0.045 Sum_probs=199.2
Q ss_pred cccccccccccc-cCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHH---
Q 013044 67 DIGSTSCATISI-ESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTA--- 142 (451)
Q Consensus 67 ~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~--- 142 (451)
......+.+|.. .++ +|.++.+.|++.+++.++..+++++.|+++||+|||+.++.+.....++.....
T Consensus 17 ~~~~~~~~~~~~~~~~-------~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~ 89 (396)
T TIGR00882 17 IMSAYFPFFPIWLHDV-------NGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYV 89 (396)
T ss_pred HHHHHHHHHHHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 333445555554 344 799999999999999999999999999999999999999887776655443321
Q ss_pred Hh-----hhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHH
Q 013044 143 LA-----PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMY 217 (451)
Q Consensus 143 ~~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f 217 (451)
+. +.+..+++.|++.|++.+...+....+..|.. ++++...+......++|.++||.+++.+.+. +||++|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~--~~~~~f 165 (396)
T TIGR00882 90 FGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFSI--DPQIVF 165 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhcc--CchHHH
Confidence 11 23445677789999999888888888877753 3345677788888899999999999988653 899999
Q ss_pred hhhHHHHHHHHHHhhc-ccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccc
Q 013044 218 GASTPLAVIMGMGMWW-LPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVS 296 (451)
Q Consensus 218 ~~~~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (451)
++.+++.++..+..+. .||+|+.... . ++ .+. ..++.+..+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------------~~-------~~~------------------~~~~~~~~~ 207 (396)
T TIGR00882 166 WLGSGFALILMLLLMFAKPKAPSSATV-A------------NA-------LGA------------------NASAFSLKL 207 (396)
T ss_pred HHHHHHHHHHHHHHHHhCCCCchhhhh-h------------cc-------ccc------------------ccCCCCHHH
Confidence 9998887775444444 3443321000 0 00 000 001111224
Q ss_pred hhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHc----CCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 013044 297 LREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSA----GFSAASDATRVSILLGLFKLIMTGLAVLVVERLG 372 (451)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g 372 (451)
.+++++++..+...+...... ..+.....+.+.++++. +. +....+.......+...++.+..+++.||+|
T Consensus 208 ~~~~l~~~~~~~~~l~~~~~~----~~~~~~~~~~~~y~~~~~~~~~~-~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g 282 (396)
T TIGR00882 208 ALELFRQRKFWMFVLYVVGVA----CVYDVFDQQFANFFTSFFATPQQ-GTRVFGYVTTMGELLNALIMFCAPLIINRIG 282 (396)
T ss_pred HHHHHcCCcHHHHHHHHHHHH----HHHHHHHHHHHHHHHHhcccccc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 566777665443333222211 11222323344444432 33 4456778888888899999999999999999
Q ss_pred CchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhh
Q 013044 373 RRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCS 443 (451)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (451)
+|+.+.++..+.++...+... .++.+..+...++.+.+... .......+..+..|++.++++.
T Consensus 283 ~~~~l~~~~~l~~l~~~~~~~-----~~~~~~~~~~~~l~g~~~~~---~~~~~~~~~~~~~~~~~~at~~ 345 (396)
T TIGR00882 283 AKNALLIAGTIMSVRIIGSSF-----ATTALEVVILKMLHAFEVPF---LLVGCFKYITSQFDVRLSATIY 345 (396)
T ss_pred cchhHHHHHHHHHHHHHHHHh-----cCChHHHHHHHHHHHHHHHH---HHHHHHHHHHHhCCcceEEEee
Confidence 999988877777665554332 23455444444444444333 1222233445555666655533
|
|
| >COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.6e-22 Score=174.29 Aligned_cols=327 Identities=22% Similarity=0.153 Sum_probs=248.7
Q ss_pred HHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHH
Q 013044 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (451)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~ 134 (451)
..+.+..+-.--..+..+|.++++.+| +|+|.+..|+++++..+...+.+++..+++.|+|.++.+..++++.
T Consensus 15 ~gIvlia~NLR~~itsvgPLL~~Ir~~-------~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli 87 (395)
T COG2807 15 AGIVLIAFNLRPAITSVGPLLDEIRQD-------LGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLI 87 (395)
T ss_pred HHHHHHHhccchhhhhhhhhHHHHHHH-------hcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHH
Confidence 333444444455577789999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchh
Q 013044 135 LVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWR 214 (451)
Q Consensus 135 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr 214 (451)
++|.++-... +.+.++.+-.+.|.|.+......+..+.+.+| |+-+..++++....++|.++++.+.-.+.++..+||
T Consensus 88 ~~G~~iR~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~ 165 (395)
T COG2807 88 AAGILIRSLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWR 165 (395)
T ss_pred HHHHHHHhcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHH
Confidence 9999999887 88889999999999999999999999999999 667999999999999999999999999988766899
Q ss_pred HHHhhhHHHHHHHHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccc
Q 013044 215 YMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKE 294 (451)
Q Consensus 215 ~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (451)
....+.+.++++.++.++. ...|.. . ...+.+.
T Consensus 166 ~aL~~WAl~allAl~~WlP--q~~r~~---~------------------------------------------~~~~~~~ 198 (395)
T COG2807 166 GALGFWALLALLALLIWLP--QALREQ---A------------------------------------------ASIATKL 198 (395)
T ss_pred HHHHHHHHHHHHHHHHHhh--hccccc---c------------------------------------------ccccccc
Confidence 9999999998887666553 221100 0 0012223
Q ss_pred cchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhc-CC
Q 013044 295 VSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERL-GR 373 (451)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~ 373 (451)
.+...+++++.-+.+.+.+.+ +...++....|+|.++.+.|+ |..+++.+.....+..++..+....+.+|. ++
T Consensus 199 ~~~~~vw~~~~aW~vtLfmGl----qS~~~Y~~~~WLP~ili~~G~-sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~ 273 (395)
T COG2807 199 VSVRKVWRSPLAWQVTLFMGL----QSLLYYIVIGWLPAILIDRGL-SAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQ 273 (395)
T ss_pred ccccccccCchhHHHHHHHHh----hHHHHHHHHHHHHHHHHHcCC-CHHHhhhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 344567777655555544443 444466888899999999999 999999999999999999999999999975 45
Q ss_pred chhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeee-eecchhhhhhhhhhheeeeecC
Q 013044 374 RPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYH-FRIFFFEMTRIVCSIYCAKLRF 451 (451)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 451 (451)
|+..+....++.++.+.+.+ .+...+++. .++++.+.+. ..|...+. ......++..+.-+++++.+.|
T Consensus 274 r~~~~~~~~~~l~G~~G~~~---~P~~~~~lw---~~llG~G~G~---~F~laL~li~~rs~~a~~Aa~LSgmaQg~GY 343 (395)
T COG2807 274 RPLVVLALLLMLVGLVGLLL---APGQLPILW---ALLLGLGQGG---AFPLALTLILLRSSDAAIAAALSGMAQGVGY 343 (395)
T ss_pred chHHHHHHHHHHHHHHHHHH---hhhhHHHHH---HHHHhCccch---HHHHHHHHHHhhcCChHHHHHHHHHhhhhhH
Confidence 66666666666666555432 222333333 2344444443 34444433 3444455566667777776654
|
|
| >TIGR00889 2A0110 nucleoside transporter | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-22 Score=191.70 Aligned_cols=310 Identities=12% Similarity=0.034 Sum_probs=206.6
Q ss_pred ccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcc-hHHHHHHHHHHHHHHHHHHHhhhHHHH
Q 013044 72 SCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGR-RRELILAALLYLVGALVTALAPDFIIM 150 (451)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~~~~~~~~l~~~~~~~~~~~~~~~~l 150 (451)
.+..+.+.++ +|++..++|++.+++.++..++++++|.++||+|| |+++.++.++..++..+..+.++++.+
T Consensus 23 ~~l~~~l~~~-------~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (418)
T TIGR00889 23 VTLGSYMSKT-------LHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGM 95 (418)
T ss_pred HHHHHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 4445556666 79999999999999999999999999999999965 788898999998898888899999999
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHH--------hccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHH
Q 013044 151 VVGRFVFGIGIGLAMHAAPMYIA--------ETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTP 222 (451)
Q Consensus 151 ~~~r~l~G~~~~~~~~~~~~~i~--------~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~ 222 (451)
++.|++.|++.+...+...++.. |......|.+..| .+|.++++++++.+.... .|+ +|++.++
T Consensus 96 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~-~~~-~f~~~~~ 167 (418)
T TIGR00889 96 FPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIEL-SNI-QLYITAG 167 (418)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccc-hhH-HHHHHHH
Confidence 99999999988777776665532 2233334555554 368888888888773322 455 3555666
Q ss_pred HHHHHHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhc
Q 013044 223 LAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFH 302 (451)
Q Consensus 223 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (451)
..++..+..+++||+|+. ++ +++.+ . ++..+.+.++++|
T Consensus 168 ~~~~~~~~~~~~~e~~~~---~~-~~~~~---------------------------~----------~~~~~~~~~~~~k 206 (418)
T TIGR00889 168 SSALLGVFALTLPDIPVA---KS-TAKMS---------------------------I----------KVMLGLDAFILFK 206 (418)
T ss_pred HHHHHHHHHhcCCCCCCC---cc-ccccC---------------------------H----------HHHhhhhHHHHhc
Confidence 555544555677886530 00 00000 0 0000112334566
Q ss_pred ccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCc--------hhHHHHHHHHHHHHHHHHHHHHHHhhhcCCc
Q 013044 303 GKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAA--------SDATRVSILLGLFKLIMTGLAVLVVERLGRR 374 (451)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--------~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~ 374 (451)
++.....++..++.... ......+.+.++++.|. ++ ...+.......+..+++.+..+++.||+|+|
T Consensus 207 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r 281 (418)
T TIGR00889 207 NKRMAIFFFFSMLLGAP----LQITNIFGNGFLHEFGR-NPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIK 281 (418)
T ss_pred CCCeeeHHHHHHHHHhH----HHHHHHhHHHHHHHhcc-cccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcH
Confidence 65444444333332221 12333455666776665 33 5568888999999999999999999999999
Q ss_pred hhhhchhHHHHHHHHHHHHhhhccCC-cchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheee
Q 013044 375 PLLLGGVSGIVISLFLLGSYYLFLDD-VPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCA 447 (451)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (451)
+.+..+.++..++..++... .... ..+..++..++.+.+++. ..+....++.+.+|++.|+++.++.+
T Consensus 282 ~~l~~~~~~~~v~~~l~~~~--~~~~~~~~~l~l~~~l~g~~~~~---~~~~~~~~i~~~~p~~~~g~~~g~~~ 350 (418)
T TIGR00889 282 KVMLLSLVAWALRFGFFAYG--DPEYFGYALLFLSMIVYGCAFDF---FNISGSVFVEKEVPVHIRASAQGLFT 350 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHc--CcchhhHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 99998888777766554331 0001 112233344455555554 45555677889999999999988774
|
This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli. |
| >KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.9e-24 Score=189.00 Aligned_cols=233 Identities=14% Similarity=0.186 Sum_probs=184.0
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 168 (451)
++.+++++|++.+...+...+.+++.|.+.||+|+|-.+++|++.....++++++.++++.++++|.+||+|.+...+..
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsg 180 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSG 180 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhh
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCC-cchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhhcccCchHHHHHhhcc
Q 013044 169 PMYIAETAPTPM-RGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMK 247 (451)
Q Consensus 169 ~~~i~~~~~~~~-r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 247 (451)
.++++|.+|+++ |++++|+...+.++|..+||++||.+.+.. |.+.+|.+.++++++-..+.+++-|+.+.
T Consensus 181 lamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~-Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~------- 252 (464)
T KOG3764|consen 181 LAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFA-GKSAPFLVLAIVLLLDGALQLLVIEPTEM------- 252 (464)
T ss_pred HHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhc-CCcCcHHHHHHHHHHHHHHHHheeCcccc-------
Confidence 999999998765 799999999999999999999999999998 99999999999999955544444332110
Q ss_pred ccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHH
Q 013044 248 RKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSV 327 (451)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (451)
++...++..+++++++++........ ..+.+.. ....
T Consensus 253 ---------------------------------------~~~~~~~~~~~~~Ll~dP~I~~~aga---i~~~n~~-lafL 289 (464)
T KOG3764|consen 253 ---------------------------------------DPDSTEQGTPMWSLLMDPYILLIAGA---ITFSNSS-LAFL 289 (464)
T ss_pred ---------------------------------------CccccccCccHHHHHhCchHhhhhcc---hhhccch-HHHh
Confidence 00022344567788887644332221 1221111 1111
Q ss_pred HHhHHH-HHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 013044 328 LYYAAS-ILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGR 373 (451)
Q Consensus 328 ~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~ 373 (451)
---.+. ..++..- +.-+.+.......+...++..+.|.+.||++.
T Consensus 290 ePtlslwm~e~m~~-p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~ 335 (464)
T KOG3764|consen 290 EPTLSLWMLETMFT-PGWEVGLAFLPASLSYAIGTNLFGKLADKYPH 335 (464)
T ss_pred CcccHHHHHHhccC-CCcceeeeecccccchhccCchHHHHHHhcCc
Confidence 111122 2344442 45588999999999999999999999999994
|
|
| >PTZ00207 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.2e-21 Score=185.96 Aligned_cols=154 Identities=17% Similarity=0.186 Sum_probs=128.3
Q ss_pred ccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHh------h
Q 013044 72 SCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA------P 145 (451)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~------~ 145 (451)
+...|.+.++ +|++..+++++.++. ..+..++++.|++.||+|||++++++.++++++.++++++ +
T Consensus 47 sv~s~~L~~~-------lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~ 118 (591)
T PTZ00207 47 NLISGAMQAR-------YNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEG 118 (591)
T ss_pred HHHHHHHHHH-------hCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccC
Confidence 3456677777 899999999998874 4556788899999999999999999999999999999997 6
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHH-HHHHhhhhcccccchhHHHhhhHHHH
Q 013044 146 DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVG-GYGIGSLLVDLVAGWRYMYGASTPLA 224 (451)
Q Consensus 146 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~-g~~l~~~l~~~~~~wr~~f~~~~~~~ 224 (451)
+++.+.+.|++.|+|.+...+.+...+.+|+| ++||++.|+...+.++|.++ +++..+++. . +|++.|++.+++.
T Consensus 119 s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~--~-~~~~~fl~l~vl~ 194 (591)
T PTZ00207 119 SVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS--D-NTSAYFFFLMSFA 194 (591)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH--H-hHHHHHHHHHHHH
Confidence 89999999999999999999999999999997 78999999999999999975 555555543 2 7899898888887
Q ss_pred HHH-HHHhhcccCc
Q 013044 225 VIM-GMGMWWLPAS 237 (451)
Q Consensus 225 ~~~-~~~~~~~~e~ 237 (451)
++. ++..+++++.
T Consensus 195 ~vv~ll~~~~vr~p 208 (591)
T PTZ00207 195 LVVGILAIVFMRLP 208 (591)
T ss_pred HHHHHHHHhheeCC
Confidence 774 4444444333
|
|
| >TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-20 Score=181.35 Aligned_cols=344 Identities=12% Similarity=0.007 Sum_probs=213.3
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhh-hcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADI-LGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHA 167 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 167 (451)
+|++..+.+++.+.+.++..++++++|+++|| +|||++++++.++.+++.++.+++++++.++++|++.|+|.|...+.
T Consensus 43 lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~ 122 (475)
T TIGR00924 43 LGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKAN 122 (475)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCC
Confidence 68999999999999999999999999999999 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCC---cchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhhcccCchHHHHHh
Q 013044 168 APMYIAETAPTPM---RGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLC 244 (451)
Q Consensus 168 ~~~~i~~~~~~~~---r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~ 244 (451)
..++++|++|+++ |+.+.++...+.++|.++||.+++++.+.. +||+.|++.++..++..+..++.++..+ ..
T Consensus 123 ~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~-g~~~~f~~~~~~~~~~~l~~~~~~~~~~---~~ 198 (475)
T TIGR00924 123 PSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENY-GYHVGFNLAAVGMVIGLLTFFAGRHMLR---DI 198 (475)
T ss_pred HHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHcccccc---cC
Confidence 9999999998754 888999999999999999999999998877 9999999988655554444333332111 00
Q ss_pred hc-cccCCccchHHHHHHHH----------H-HHhCCCCCCCCchhHHHH-----HHhhcccccccccchhhhhcccchh
Q 013044 245 AM-KRKGDMQDLRESAISCL----------C-RLRGQSIGDSAPTEVDEI-----LTELSYVGEDKEVSLREVFHGKCLK 307 (451)
Q Consensus 245 ~~-~~~~~~~~~~~~~~~~~----------~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (451)
++ +++.+.++ .+...... . .....+.. ..+..... .........+++ ..+.-+++. .
T Consensus 199 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~ 272 (475)
T TIGR00924 199 GSVPDPLSGQG-KTYGKLLLALLAALALVFFCAWLMHHVV--IANILLMTVTLAVIIFFFRLAFKPR--LDAVARNKM-Y 272 (475)
T ss_pred CCCCCCcchhh-hhhHHHHHHHHHHHHHHHHHHHHHhccH--HHHHHHHHHHHHHHHHHHHHHHhcc--CCHHHHhHH-H
Confidence 00 00000000 00000000 0 00000000 00000000 000000000000 001111111 1
Q ss_pred HHHHHHHHHHHHHhhchhHHHHhHHHHHHH-cCCCC----chhHHHHHHHHHHHHHHHHHHHHHHhhhcCC-----chhh
Q 013044 308 ALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSA----ASDATRVSILLGLFKLIMTGLAVLVVERLGR-----RPLL 377 (451)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s----~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~-----~~~~ 377 (451)
. ++...+.....+..+.-.....+.+.++ .+. + ....+.+.+...+..++..++..++..|.+| +...
T Consensus 273 ~-~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~-~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~ 350 (475)
T TIGR00924 273 A-YIVLFLEAVVFWVLYAQMPTSLNFFADNNMHH-EMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPL 350 (475)
T ss_pred H-HHHHHHHHHHHHHHHHHhhhHHHHHHHHhccc-cccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHH
Confidence 1 2222222222222222333333433332 222 1 1236677777777777777765544333333 3333
Q ss_pred --hchhHHHHHHHHHHHHhhhc----cCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheee
Q 013044 378 --LGGVSGIVISLFLLGSYYLF----LDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCA 447 (451)
Q Consensus 378 --~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (451)
.+|.++.++++..+++.... ...+.|+.+...++...+... ..|....+..+..|++.|++..++..
T Consensus 351 k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~---~~p~~~~~~~~~aP~~~~g~~~g~~~ 423 (475)
T TIGR00924 351 KFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELM---ISPLGLSWWTKIAPQRLMGQMLGMWF 423 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHH---HhHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 56777777776665432111 123566677777777777776 78888999999999999999988653
|
The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists. |
| >TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.7e-22 Score=190.60 Aligned_cols=306 Identities=13% Similarity=0.022 Sum_probs=203.8
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhh----hcchH-HHHHHHHHHHHHHHHHHHhhh------HHHHHHHHHHH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADI----LGRRR-ELILAALLYLVGALVTALAPD------FIIMVVGRFVF 157 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr~-~~~~~~~l~~~~~~~~~~~~~------~~~l~~~r~l~ 157 (451)
+|+++.++|++.++..+..++..++.|+++|| +|||| .++.+..+.+++.+++...++ .+.+++.+++.
T Consensus 30 ~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (437)
T TIGR00792 30 LGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITYILL 109 (437)
T ss_pred cCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHH
Confidence 89999999999999999999999999999998 67744 677888888888888877654 46677888899
Q ss_pred HHHHhhhhhhHHHHHHhcc-CCCCcchHHHHHHHHHHHHHHHHHHHhhhhcc------cccchhHHHhhhHHHHHHHH-H
Q 013044 158 GIGIGLAMHAAPMYIAETA-PTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD------LVAGWRYMYGASTPLAVIMG-M 229 (451)
Q Consensus 158 G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~------~~~~wr~~f~~~~~~~~~~~-~ 229 (451)
+++.+...+...++..|.. ++++|++..++.+.+..+|..+++.+.+.+.. ...+||+.+.+.++++++.. +
T Consensus 110 ~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~ 189 (437)
T TIGR00792 110 GLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLII 189 (437)
T ss_pred HHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHH
Confidence 9998887777788888987 46889999999998888888777666555442 12389999999998887744 4
Q ss_pred HhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhcccchhHH
Q 013044 230 GMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKAL 309 (451)
Q Consensus 230 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (451)
..+.++|+++. ++ + + + +.+......++++++++..+..
T Consensus 190 ~~~~~~e~~~~---~~---~-~------~-----------------------------~~~~~~~~~~~~l~~~~~~~~~ 227 (437)
T TIGR00792 190 CFFGTKERYSE---IP---K-N------I-----------------------------EKKLSLKQIFKALFKNDQLLIL 227 (437)
T ss_pred HHcCCEecCCC---CC---c-c------c-----------------------------ccCCCHHHHHHHHhCCHHHHHH
Confidence 44556665310 00 0 0 0 0000011234455666544444
Q ss_pred HHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHH
Q 013044 310 IIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLF 389 (451)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 389 (451)
.+...+..+. ......+.+++.+.... +....+.......++.+++.++.+++.||+|+|+.+..+..+..++.+
T Consensus 228 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~ 302 (437)
T TIGR00792 228 CLAYLFYNLA----FNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYL 302 (437)
T ss_pred HHHHHHHHHH----HHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 3333322222 22233334444433222 455666777778899999999999999999999998888777776655
Q ss_pred HHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchh-------hhhhhhhhheeee
Q 013044 390 LLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFF-------EMTRIVCSIYCAK 448 (451)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 448 (451)
.+... .++.+...+..++.+.+.+. ..+..+.+..|..+ ++.+|.+.++.+.
T Consensus 303 ~~~~~----~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 361 (437)
T TIGR00792 303 IFFFA----GSNLPLILVLIILAGFGQNF---VTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTF 361 (437)
T ss_pred HHHHc----chhHHHHHHHHHHHHHHHHH---HHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHH
Confidence 44321 12334444444444555554 34556666666654 4556777766543
|
GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners. |
| >PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.8e-21 Score=184.77 Aligned_cols=335 Identities=20% Similarity=0.157 Sum_probs=237.3
Q ss_pred ccchHHHHHHHHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcch
Q 013044 45 YSVSAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRR 124 (451)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr 124 (451)
+..+..|..-.+..++..+.... ++-+..+ +.-|+..++++.++..+...+.++++|.++||++||
T Consensus 10 ~~Fr~lw~a~~iS~lG~~~~~va-------~~wlv~~-------lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drr 75 (524)
T PF05977_consen 10 RNFRRLWIAQLISNLGDWMQTVA-------LAWLVTQ-------LTGSPLMVALVQAASTLPILLLSLFAGALADRFDRR 75 (524)
T ss_pred chHHHHHHHHHHHHHHHHHHHHH-------HHHHHHH-------HhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccch
Confidence 34555565555555555544333 3333323 455889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHH
Q 013044 125 RELILAALLYLVGALVTALA-----PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGG 199 (451)
Q Consensus 125 ~~~~~~~~l~~~~~~~~~~~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g 199 (451)
|+++.+-++.++..+..++. .+.+.+++.-++.|++.+...|...+++.|..|+++...+.++.+...++..++|
T Consensus 76 rili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iG 155 (524)
T PF05977_consen 76 RILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIG 155 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhcc
Confidence 99999988876665554432 4688999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhcccccchhHHHhhhHHHHHHHHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhH
Q 013044 200 YGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEV 279 (451)
Q Consensus 200 ~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (451)
|.++|.+.... |-.+.|.+.++..++.+......+.+++ ++ +.. .+. .
T Consensus 156 PalgG~Lva~~-G~~~~f~inalsfl~~i~~l~~~~~~~~----~~---~~~----~e~---~----------------- 203 (524)
T PF05977_consen 156 PALGGILVAFF-GAAAAFLINALSFLISILALLRWKPPPP----PS---SLP----RER---F----------------- 203 (524)
T ss_pred chHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHcccccc----cc---ccc----hhh---h-----------------
Confidence 99999998877 8889999888776664444444332211 00 000 000 0
Q ss_pred HHHHHhhcccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHH-HcCCCCchhHHHHHHHHHHHHH
Q 013044 280 DEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQ-SAGFSAASDATRVSILLGLFKL 358 (451)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~ 358 (451)
.+.-+..++-+.+++..+..++...+..+.. ......+|.+.+ ..|. ++...|++....+++.+
T Consensus 204 ----------~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~----~a~~aLlPl~a~~~l~~-~a~~yGll~a~~gvGai 268 (524)
T PF05977_consen 204 ----------FSALREGLRYVRSSPPLRSVLLRSFLFNLFA----SAVWALLPLFARDVLGG-GASGYGLLLAAFGVGAI 268 (524)
T ss_pred ----------hhhHHHHHHHHhcchHHHHHHHHHHHHHHhh----hHHHHhhhHHHHHHhCC-cHHHHHHHHHHHHHHHH
Confidence 0011123333444444444333333222221 123334666654 4677 88899999999999999
Q ss_pred HHHHHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhh
Q 013044 359 IMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMT 438 (451)
Q Consensus 359 ~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (451)
+|.++.+++.+|+++++.+..+.+..+++.+.+++ .++.+...+.+++.+.+... ......+...+..|++.
T Consensus 269 ~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal-----~~~~~~~~~~l~l~G~~~~~---~~~~~~t~~Q~~~P~~~ 340 (524)
T PF05977_consen 269 LGALLLPRLRRRLSSRRLVLLASLLFALALLLLAL-----SPSFWLALIALFLAGAAWII---ANSSLNTLVQLSVPDWV 340 (524)
T ss_pred HHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhc-----chHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHhCCHHH
Confidence 99999999999999988888888777777666654 34556555555555555554 44455677889999999
Q ss_pred hhhhhheeee
Q 013044 439 RIVCSIYCAK 448 (451)
Q Consensus 439 ~~~~~~~~~~ 448 (451)
||...++...
T Consensus 341 ~GRv~si~~~ 350 (524)
T PF05977_consen 341 RGRVFSIYQM 350 (524)
T ss_pred HhHHHHHHHH
Confidence 9999887543
|
EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function []. |
| >TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.6e-21 Score=178.79 Aligned_cols=272 Identities=17% Similarity=0.048 Sum_probs=192.0
Q ss_pred HHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHH--HHHHHHHHHHHHHHHhh-hhhhhcchHHHHHHH
Q 013044 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLI--TSGSLYGALIGSILAFN-IADILGRRRELILAA 131 (451)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~--~s~~~~~~~~~~~~~g~-l~dr~Grr~~~~~~~ 131 (451)
..+...++.+|...+...+.+|...+| .|.+.+++|++ .+++.+...+.+++++. ..||+||||.+++..
T Consensus 4 ~~~~~ly~~~g~~~~~~~p~lp~~l~~-------~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~ 76 (390)
T TIGR02718 4 ITLGLLYLSQGIPIGLAMDALPTLLRE-------DGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPM 76 (390)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHH
Confidence 445566788899989999999999888 89999999997 46778888888888844 799999999976665
Q ss_pred HHH-HHHHHHHH-H--hhh-HHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhh
Q 013044 132 LLY-LVGALVTA-L--APD-FIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLL 206 (451)
Q Consensus 132 ~l~-~~~~~~~~-~--~~~-~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l 206 (451)
.+. +......+ + ..+ ..+++..-++.++..+...+...++..|..++++++...+....+..+|.++|+.+.+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l 156 (390)
T TIGR02718 77 QCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVL 156 (390)
T ss_pred HHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 432 22222222 1 222 334455566677778888888888889999888889888889888899999999999898
Q ss_pred cccccchhHHHhhhHHHHHHHHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhh
Q 013044 207 VDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTEL 286 (451)
Q Consensus 207 ~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (451)
.+.. +||..|++.+++.++..+..++++|+++. ++ + +
T Consensus 157 ~~~~-gw~~~f~~~a~l~~~~~~~~~~~~~~~~~---~~---~-~----------------------------------- 193 (390)
T TIGR02718 157 FGKF-GQRPAFLLVACVPLASLVCVLWLKDRAVA---SP---E-A----------------------------------- 193 (390)
T ss_pred HHHh-CHHHHHHHHHHHHHHHHHHHHHcCCCCcC---cc---c-c-----------------------------------
Confidence 8887 99999999998887754444454433210 00 0 0
Q ss_pred cccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHH-HHHHHHHHHH
Q 013044 287 SYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGL-FKLIMTGLAV 365 (451)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~g 365 (451)
++++..+.++.++++..+......++.... ......+.+.++++.|+ +.++.+......++ ..+++.++.|
T Consensus 194 ---~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~l~~~G~-s~~~ig~~~~~~~~~~~~~g~~~~g 265 (390)
T TIGR02718 194 ---PLARRASLFRFFRRPLAWSLLALALLSAMT----AVSGFGLSKLYLVDAGW-PLEWIGRLGMAGGAVTVLLGCGGGA 265 (390)
T ss_pred ---chhhHHHHHHHHcCcCHHHHHHHHHHHHHH----HHHHHHHhhHHHHhcCC-CHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 000112345667766555444433333222 22334456677778899 88888988887764 6677789999
Q ss_pred HHhhhcCCchhhhchhHHH
Q 013044 366 LVVERLGRRPLLLGGVSGI 384 (451)
Q Consensus 366 ~l~d~~g~~~~~~~~~~~~ 384 (451)
++.||+|+|+.+..+..+.
T Consensus 266 ~l~~r~g~~~~l~~~~~~~ 284 (390)
T TIGR02718 266 WLVRRAGLWRTFILGVGLA 284 (390)
T ss_pred HHHHHhhHHHHHHHHHHHH
Confidence 9999999999887766655
|
RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes. |
| >PRK09584 tppB putative tripeptide transporter permease; Reviewed | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.7e-20 Score=180.94 Aligned_cols=343 Identities=12% Similarity=0.046 Sum_probs=200.2
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhh-hcchHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHhhhhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADI-LGRRRELILAALLYLVGALVTALAP-DFIIMVVGRFVFGIGIGLAMH 166 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~l~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~~ 166 (451)
+|+++++.+++.+.+........+++|+++|| +|||++++++.++.+++.+++++++ +.+.++++|+++|++.|...+
T Consensus 52 lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~ 131 (500)
T PRK09584 52 LGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKA 131 (500)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccC
Confidence 89999999999988887777777899999999 5999999999999999999998874 567778899999999999999
Q ss_pred hHHHHHHhccCCCC--cchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhhcccCchHHHHHh
Q 013044 167 AAPMYIAETAPTPM--RGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLC 244 (451)
Q Consensus 167 ~~~~~i~~~~~~~~--r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~ 244 (451)
...+++.|++|+++ |..+++++..+.++|..+||.+++++.+.. |||+.|++.++..++..+.+++.+ +++..+
T Consensus 132 ~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~-g~~~~F~i~~i~~~i~~i~~~~~~---~~~~~~ 207 (500)
T PRK09584 132 NPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKY-GWSVAFALSVVGMLITVVNFAFCQ---RWVKQY 207 (500)
T ss_pred CHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHHHHHhH---HHhccC
Confidence 99999999998653 456788999999999999999999999887 999999998765555333322221 111111
Q ss_pred hcc---ccCCccchHHHHHHHHHH--HhCCC-CCCCCchhHHHHH---HhhcccccccccchhhhhcccchhHHHHHHHH
Q 013044 245 AMK---RKGDMQDLRESAISCLCR--LRGQS-IGDSAPTEVDEIL---TELSYVGEDKEVSLREVFHGKCLKALIIGAGL 315 (451)
Q Consensus 245 ~~~---~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (451)
+++ ++.|..+........... ..... .+.+......... .......... ...+. ..++.+..+.+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~ 281 (500)
T PRK09584 208 GSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVVIFGKEAF--AMKGA----ARRKMIVAFIL 281 (500)
T ss_pred CCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHh--hcCHH----HHHHHHHHHHH
Confidence 100 011111110000000000 00000 0000000000000 0000000000 00011 11222211111
Q ss_pred HHHHHhhchhHHHHhHHHHHH-----HcC--C-CCchhHHHHHHHHHHHHHHHHHHH----HHHhhhcCCchhhhchhHH
Q 013044 316 VLFQQITGQPSVLYYAASILQ-----SAG--F-SAASDATRVSILLGLFKLIMTGLA----VLVVERLGRRPLLLGGVSG 383 (451)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~-----~~~--~-~s~~~~~~~~~~~~~~~~~~~~~~----g~l~d~~g~~~~~~~~~~~ 383 (451)
. ... ..+.......+..+. +.+ . .-....+.+.+...+..++..++. +++.+|.+..+.+.+++++
T Consensus 282 ~-~~~-i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l 359 (500)
T PRK09584 282 M-LEA-IIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVL 359 (500)
T ss_pred H-HHH-HHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHH
Confidence 1 110 011112122222211 111 0 011235556666666666666666 4444555555667788888
Q ss_pred HHHHHHHHHHhhhccC----CcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhhee
Q 013044 384 IVISLFLLGSYYLFLD----DVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYC 446 (451)
Q Consensus 384 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (451)
.+++++.++....... -+.++.+...++.+.+... ..|....++.+..|++.||.++|+.
T Consensus 360 ~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~---~~p~g~s~~~~~aP~~~rg~~~g~~ 423 (500)
T PRK09584 360 CSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELM---ISGLGLAMVAQLVPQRLMGFIMGSW 423 (500)
T ss_pred HHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHH---HhHHHHHHHHHhCcHHHHHHHHHHH
Confidence 8888777655422111 1234555566666666665 7888889999999999999998864
|
|
| >TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.1e-19 Score=165.40 Aligned_cols=320 Identities=15% Similarity=0.091 Sum_probs=204.0
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhh----hhcchHHHHHH-HHHHHHHHHHHHHhhhHH---------------
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIAD----ILGRRRELILA-ALLYLVGALVTALAPDFI--------------- 148 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~Grr~~~~~~-~~l~~~~~~~~~~~~~~~--------------- 148 (451)
+|.++...+++..+..+...+.+++.|+++| |+||||.++++ .....++.++.+++++++
T Consensus 34 lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~ 113 (477)
T TIGR01301 34 LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRA 113 (477)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHH
Confidence 7999999999999999999999999999999 59999998874 666677777777776643
Q ss_pred --HHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCc--chHHHHHHHHHHHHHHHHHHHhhhhc--ccc------------
Q 013044 149 --IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMR--GQLISLKEFFIVLGMVGGYGIGSLLV--DLV------------ 210 (451)
Q Consensus 149 --~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~~g~~l~~~l~--~~~------------ 210 (451)
.++++-.+..++.....+...++++|.+|+++| +.+.++.+...++|.++|+.++++.. +..
T Consensus 114 i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~ 193 (477)
T TIGR01301 114 IIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSC 193 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhccccccccccccc
Confidence 233333445557888888899999999998865 67999999999999999999998751 110
Q ss_pred cchhHHHhhhHHHHHH-HHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhccc
Q 013044 211 AGWRYMYGASTPLAVI-MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYV 289 (451)
Q Consensus 211 ~~wr~~f~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (451)
.+.|+.|++.++..++ ..+..+.++|.|... .+ +. ..++ .++ .+
T Consensus 194 ~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~--~~-----~~--~~~~-------~~~-------------------~~ 238 (477)
T TIGR01301 194 ANLKSCFLIDIILLAILTYIALSAVKENPLIG--SD-----DF--INSE-------AAP-------------------PS 238 (477)
T ss_pred chHHHHHHHHHHHHHHHHHHHeeeeeccCCCc--cc-----cc--hhhh-------ccc-------------------cc
Confidence 1678999998888777 556666788865310 00 00 0000 000 00
Q ss_pred ccccccchhhhhccc-chhHHHHHHHHHHHHHhhchhHHHHhHHHHHHH--cCCCCc-----hh----HHHHHHHHHHHH
Q 013044 290 GEDKEVSLREVFHGK-CLKALIIGAGLVLFQQITGQPSVLYYAASILQS--AGFSAA-----SD----ATRVSILLGLFK 357 (451)
Q Consensus 290 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~s~-----~~----~~~~~~~~~~~~ 357 (451)
+.+.+..+++++++- ...+.+...+...++.+.++..+.+|.+.++.+ ++..+. ++ ..+......+..
T Consensus 239 ~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~ 318 (477)
T TIGR01301 239 KHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVL 318 (477)
T ss_pred ccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHH
Confidence 000111233333321 122333333333344444555566666666543 222111 11 234455566666
Q ss_pred HHHHHHHHHHhhhcCC-chhhhchhHHHHHHHHHHHHhhhccCC--c--------------chHHHHHHHHHHHhhcccc
Q 013044 358 LIMTGLAVLVVERLGR-RPLLLGGVSGIVISLFLLGSYYLFLDD--V--------------PAVAVVALLLYVGCYQVIK 420 (451)
Q Consensus 358 ~~~~~~~g~l~d~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--------------~~~~~~~~~~~~~~~~~~~ 420 (451)
.+.+++..++.+|+|+ |.....+.++.++++....+.....++ . .+..++.+.+.+..++.
T Consensus 319 ~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~-- 396 (477)
T TIGR01301 319 GITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAI-- 396 (477)
T ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHH--
Confidence 6777888899999985 666678877777777666543221100 0 25556666666777765
Q ss_pred CCCceeeeeeecchhhh--hhhhhhhee
Q 013044 421 NFNPSKIYHFRIFFFEM--TRIVCSIYC 446 (451)
Q Consensus 421 ~~~~~~~~~~~~~~~~~--~~~~~~~~~ 446 (451)
...++++++++..+++ ..|..+|+-
T Consensus 397 -~~siPfal~s~~~~~~~~~~G~~mgil 423 (477)
T TIGR01301 397 -TYSIPFALASIRSSNLGAGQGLSMGVL 423 (477)
T ss_pred -HHHHhHHHHHHHccccCCCCcchhhHH
Confidence 6788888888888854 446666654
|
This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot. |
| >PRK15462 dipeptide/tripeptide permease D; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.1e-17 Score=158.08 Aligned_cols=339 Identities=12% Similarity=-0.000 Sum_probs=197.8
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhh-cchHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHhhhhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADIL-GRRRELILAALLYLVGALVTALAP-DFIIMVVGRFVFGIGIGLAMH 166 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~l~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~~ 166 (451)
+|.++.+.+.+.+.+.....++.+++|+++||+ ||||+++++.++..++.++.+..+ +...++++..+.++|.|...+
T Consensus 40 lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~ 119 (493)
T PRK15462 40 LKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKS 119 (493)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccc
Confidence 789999999999999999999999999999999 999999999999999988776543 223344455556677777778
Q ss_pred hHHHHHHhccCCC--CcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhhcccCchHHHHHh
Q 013044 167 AAPMYIAETAPTP--MRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLC 244 (451)
Q Consensus 167 ~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~ 244 (451)
...++++|.+|++ +|..++++.....++|..++|.+.+++.+.. |||+.|.+.++..++.++..++..+. +.+.
T Consensus 120 ~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~-Gw~~~F~iaaigm~l~li~~~~~~~~---l~~~ 195 (493)
T PRK15462 120 NVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEY-SWAMGFGLAAVGMIAGLVIFLCGNRH---FTHT 195 (493)
T ss_pred cHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhh-ChHHHHHHHHHHHHHHHHHHHHhhhh---hccC
Confidence 8889999999875 6999999999999999999999999998887 99999998766444433333322111 1010
Q ss_pred hccccCCccchHHHHHH------HHH----HHh-CCCCCCCCchhHHHHHHh-----hcccccccccchhhhhcccchhH
Q 013044 245 AMKRKGDMQDLRESAIS------CLC----RLR-GQSIGDSAPTEVDEILTE-----LSYVGEDKEVSLREVFHGKCLKA 308 (451)
Q Consensus 245 ~~~~~~~~~~~~~~~~~------~~~----~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 308 (451)
...++ +...+++.... ... .+. ..-.++ ........... .-.... .+ .++..+++
T Consensus 196 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~er~r 266 (493)
T PRK15462 196 RGVNK-KVLRATNFLLPNWGWLLVLLVATPALITVLFWKE-WSVYALIVATIIGLGVLAKIYR-KA------ENQKQRKE 266 (493)
T ss_pred CCCCC-CCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH-hc------CCHHHHhh
Confidence 00000 00000000000 000 000 000000 00000000000 000000 00 00001122
Q ss_pred HHHHH--HHHHHHHhhchhHHHHhHHHHHHH------cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCC--ch---
Q 013044 309 LIIGA--GLVLFQQITGQPSVLYYAASILQS------AGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGR--RP--- 375 (451)
Q Consensus 309 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~------~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~--~~--- 375 (451)
+.... ++.....+..+.-...-+..+.++ .|+ .-...+..+...+..++.+++..++=.|..| |.
T Consensus 267 ~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~--~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~ 344 (493)
T PRK15462 267 LGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGY--TVPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRI 344 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhcce--eeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCc
Confidence 21111 111111111111111111222222 122 2346677777788777777777766555522 21
Q ss_pred --hhhchhHHHHHHHHHHHHhhhccC----CcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhhe
Q 013044 376 --LLLGGVSGIVISLFLLGSYYLFLD----DVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIY 445 (451)
Q Consensus 376 --~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (451)
-..+|+++.+++.+++........ .+.++.+....+...+--. ..|+....++++.|++.++..+|+
T Consensus 345 ~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~---~sPvgls~~~~laP~~~~g~~mg~ 417 (493)
T PRK15462 345 WGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELF---IDPVAMSQITRIEIPGVTGVLTGI 417 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHH---HChHHHHHHHHhChHHHHHHHHHH
Confidence 145777777777766654332211 2456666666666666665 899999999999999999998875
|
|
| >KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.80 E-value=6e-20 Score=153.38 Aligned_cols=349 Identities=14% Similarity=0.082 Sum_probs=224.9
Q ss_pred hHHHHHHHHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhh-hcchHH
Q 013044 48 SAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADI-LGRRRE 126 (451)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~ 126 (451)
.++...++.+|+..|-..+.....+....+...| .+++.++..++.++|.....+-++++|++.|| +|.|..
T Consensus 40 ~hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d-------~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~g 112 (459)
T KOG4686|consen 40 GHRFMALVFMCLLGFGSYFCYDAPGALQIDFKLD-------SNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLG 112 (459)
T ss_pred hhHHHHHHHHHHhcccceeecCCchhhhhhhhcc-------cccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHH
Confidence 3445666777888888888888777777777777 78888999999999999999999999999996 788887
Q ss_pred HHHHHHHHHHHHHHHHH---hhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHh
Q 013044 127 LILAALLYLVGALVTAL---APDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIG 203 (451)
Q Consensus 127 ~~~~~~l~~~~~~~~~~---~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~ 203 (451)
-++-+....+|.+.++. .+.+|.++++|++.|+|.-..-.+..++..-|+..|+.+.++|+..+..-+|..+-..+.
T Consensus 113 tii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm 192 (459)
T KOG4686|consen 113 TIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLM 192 (459)
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeec
Confidence 77777777777777764 688999999999999998888889999999999999999999999999999998888888
Q ss_pred hhhcccccchhHHHhhhHHHHHHHHHHhh---cccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHH
Q 013044 204 SLLVDLVAGWRYMYGASTPLAVIMGMGMW---WLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVD 280 (451)
Q Consensus 204 ~~l~~~~~~wr~~f~~~~~~~~~~~~~~~---~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (451)
+++.+.. +- .| -...-+.+.+.+.+ .+..+-......+ -.++.|++.+.+-++...
T Consensus 193 ~~ly~~~-~~--~~-~~~ghT~LG~~l~~~~~tc~~slical~lg--------~~D~rAerilh~e~g~~G--------- 251 (459)
T KOG4686|consen 193 PFLYDTM-GR--MF-PGVGHTLLGLWLCFEVKTCKQSLICALSLG--------LSDDRAERILHLEEGFLG--------- 251 (459)
T ss_pred HHHHHHH-HH--hc-ccchHHHHHHHHHHHHHHHHHHHHHHHHhh--------hhhhHHHHHHhhhcCccc---------
Confidence 7776643 11 00 00000111000000 0000000000000 011222222222211111
Q ss_pred HHHHhhcccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHH-HHcCCCCchhHHHHHHHHHHHHHH
Q 013044 281 EILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASIL-QSAGFSAASDATRVSILLGLFKLI 359 (451)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~~~~ 359 (451)
++.+..-..-++ +.++.+.+.+.++... +..+....|.++ +++|+ |+..++.+.+.......+
T Consensus 252 ----------e~pkLtdv~~f~-ppfw~~~iicv~yyva----~fPFi~lg~~fF~~rfGl-S~~~a~~i~s~vy~Isav 315 (459)
T KOG4686|consen 252 ----------EEPKLTDVNTFY-PPFWVLVIICVLYYVA----WFPFITLGPMFFQKRFGL-SAVSAGNILSTVYGISAV 315 (459)
T ss_pred ----------CCcccccccccC-ccHHHHHHHHHHHHHH----HHHHhhhhHHHHHHhhCC-Chhhccchhhhhhhhhhh
Confidence 111111111222 2223333333222222 223333445555 46799 889999999988889999
Q ss_pred HHHHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhh
Q 013044 360 MTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTR 439 (451)
Q Consensus 360 ~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (451)
.+++.|.++||+|++-..+.+..+..+..-....+ ..+-....+.+.+..++. .....|..++.+.|++.-
T Consensus 316 ~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F------t~lsPy~~m~~lGLsysl---lAcslWP~va~~vpE~qL 386 (459)
T KOG4686|consen 316 LSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF------TFLSPYTSMTFLGLSYSL---LACSLWPCVASLVPEEQL 386 (459)
T ss_pred hhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh------hhccHHHHHHHHhhhHHH---HHHHHhhhhhhhCCHHHh
Confidence 99999999999999877666544443322222111 122334455566666665 444567788889999999
Q ss_pred hhhhheeeee
Q 013044 440 IVCSIYCAKL 449 (451)
Q Consensus 440 ~~~~~~~~~~ 449 (451)
|++.+.++++
T Consensus 387 GTaygf~qsI 396 (459)
T KOG4686|consen 387 GTAYGFIQSI 396 (459)
T ss_pred cchHHHHHHH
Confidence 9999988765
|
|
| >PF03825 Nuc_H_symport: Nucleoside H+ symporter | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.9e-18 Score=156.17 Aligned_cols=318 Identities=16% Similarity=0.142 Sum_probs=218.1
Q ss_pred ccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhc-chHHHHHHHHHHHHHHHHHHHhhh
Q 013044 68 IGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILG-RRRELILAALLYLVGALVTALAPD 146 (451)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G-rr~~~~~~~~l~~~~~~~~~~~~~ 146 (451)
.+...|.++..-++ .|.|..|+|.+.+...+...++++++|.++||++ +||++.+..++.++...+....++
T Consensus 18 ~G~~~p~~~~~L~~-------~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~ 90 (400)
T PF03825_consen 18 YGAFLPYLPLYLES-------RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSS 90 (400)
T ss_pred HHHHHHHHHHHHHh-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 33444556655555 6899999999999999999999999999999986 678888888888887777788889
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHH-hhhhcccc--cchhHHHhhhHHH
Q 013044 147 FIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGI-GSLLVDLV--AGWRYMYGASTPL 223 (451)
Q Consensus 147 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l-~~~l~~~~--~~wr~~f~~~~~~ 223 (451)
++.+++.-++..+......|...++..+... +++.-.|-.-...++|.+++... ++.+.... .+..+.+++.+..
T Consensus 91 f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 168 (400)
T PF03825_consen 91 FWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAIL 168 (400)
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHH
Confidence 9999998888999888899999999888875 23444455555556666655433 22222211 1334566666666
Q ss_pred HHHHHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhcc
Q 013044 224 AVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHG 303 (451)
Q Consensus 224 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (451)
+++.....+.+|+.|.....+. ..++....+..+++|+
T Consensus 169 ~~ll~~~~l~lp~~~~~~~~~~------------------------------------------~~~~~~~~~~~~llk~ 206 (400)
T PF03825_consen 169 SLLLAGFALFLPKTPPKRSAKE------------------------------------------SVKKLLGLDALKLLKN 206 (400)
T ss_pred HHHHHHHHHhCCCCccccccCC------------------------------------------CcccccchHHHHHhcC
Confidence 6655555566787762100000 0011111233467777
Q ss_pred cchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcC-CCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhH
Q 013044 304 KCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAG-FSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVS 382 (451)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~ 382 (451)
|.....++...+.... ......|.+.++++.| . +....+...++..+++++.-...+++.+|+|.++++.++.+
T Consensus 207 ~~~~~Fll~~~l~~~~----~~~~~~f~~~yl~~~gg~-~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~ 281 (400)
T PF03825_consen 207 PRFLVFLLAAFLIGIS----HAAYYTFFSIYLQELGGY-SGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALV 281 (400)
T ss_pred ccHHHHHHHHHHHHHH----HHHHHHHHHHHHHHcccc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 6555444433333322 3456677788889888 5 67778888889999999999999999999999999999888
Q ss_pred HHHHHHHHHHHhhhccCCcchHHHHHH----HHHHHhhccccCCCceeeeeeecchhhhhhhhhhheeee
Q 013044 383 GIVISLFLLGSYYLFLDDVPAVAVVAL----LLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCAK 448 (451)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (451)
..++=..+.+.. .++.+...+.. .+-+..++. .......++++..|++.|+++.++.++
T Consensus 282 ~~~vR~~l~a~~----~~~~~~~~~~~~l~q~lhG~tf~~---~~~a~~~yi~~~~p~~~~at~Q~l~~~ 344 (400)
T PF03825_consen 282 AYAVRWLLYAYF----SDPWPFIVALQLLGQLLHGLTFGL---FHAASVRYIDRIAPPELRATAQGLYSA 344 (400)
T ss_pred HHHHHHHHHHHh----cCCcHHHHHHHHHHHhhhhHHHHH---HHHHHHHHHHHhCCccchHHHHHHHHH
Confidence 888877666542 12223222222 235666665 566667889999999999999887654
|
|
| >KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.80 E-value=7.9e-17 Score=144.34 Aligned_cols=345 Identities=14% Similarity=0.097 Sum_probs=231.7
Q ss_pred ccchHHHHHHHHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcch
Q 013044 45 YSVSAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRR 124 (451)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr 124 (451)
+-.+++|++++++++-.+..++.-..+++.......- |+ +....-|+..+|++.+....+++-|+.||+|-|
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~-------Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR 109 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSF-------YG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLR 109 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHH-------hc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchH
Confidence 4456677787888888888888777777766655544 77 788889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhh------hHH--HHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHH
Q 013044 125 RELILAALLYLVGALVTALAP------DFI--IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGM 196 (451)
Q Consensus 125 ~~~~~~~~l~~~~~~~~~~~~------~~~--~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~ 196 (451)
...+++..+-++|..+-..+. .++ ....+..+.+.++-.....-..+..-|+++++|..+..+-.++..+|.
T Consensus 110 ~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGv 189 (480)
T KOG2563|consen 110 TALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGV 189 (480)
T ss_pred HHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHH
Confidence 999999999999999988762 345 677888999998887777777888999999999999999999999999
Q ss_pred HHHHHHhhhhcccc-----cchhH--HHhhhHHHHHH-HHHHhhcccCchH---HHHHhhccccCCccchHHHHHHHHHH
Q 013044 197 VGGYGIGSLLVDLV-----AGWRY--MYGASTPLAVI-MGMGMWWLPASPR---WLLLCAMKRKGDMQDLRESAISCLCR 265 (451)
Q Consensus 197 ~~g~~l~~~l~~~~-----~~wr~--~f~~~~~~~~~-~~~~~~~~~e~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (451)
++|.++...+..+. ..|.. .|+....++.+ +....+..++.|+ ...+..
T Consensus 190 avg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~-------------------- 249 (480)
T KOG2563|consen 190 AVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAA-------------------- 249 (480)
T ss_pred HHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhh--------------------
Confidence 99999998887532 13443 34434444333 3222333333222 110000
Q ss_pred HhCCCCCCCCchhHHHHHHhhcccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchh
Q 013044 266 LRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASD 345 (451)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 345 (451)
. .+..-..+.++.++++.+....++....... ++...+.+...+.-.|+ +...
T Consensus 250 ------------------~----~~~~f~~si~~~~~n~~F~il~~~ygi~~g~----F~~l~~~l~~~l~~sgY-~~~~ 302 (480)
T KOG2563|consen 250 ------------------L----QDASFPKSIKSCFKNRQFIILAICYGIGLGL----FNSLSTLLNLALCPSGY-EGVF 302 (480)
T ss_pred ------------------h----hcCcHHHHHHHHHcCccHHHHHHHHhhhHHH----HHHHHHHhhhccccccC-Cccc
Confidence 0 0111234566777775554444444333332 23333333333344577 6689
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCch-hhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCc
Q 013044 346 ATRVSILLGLFKLIMTGLAVLVVERLGRRP-LLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNP 424 (451)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (451)
+|+......+++++++++.|.+.||.+..+ ..+.......++...+... .......++..... ...+.++. +..|
T Consensus 303 aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~-t~~~~~~viv~~t~-~~~g~~~~--~~~P 378 (480)
T KOG2563|consen 303 AGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTC-TLFLGDSVIVFTTC-GLLGFFGT--GYLP 378 (480)
T ss_pred cchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHh-hccCCceEehhhhH-HHHHHhhc--CCCC
Confidence 999999999999999999999999998744 3344344434432222222 22222333333333 33444455 6889
Q ss_pred eeeeeeecchhhhhhhhhhheeee
Q 013044 425 SKIYHFRIFFFEMTRIVCSIYCAK 448 (451)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~ 448 (451)
+..-+..|..=+...++..|+.+.
T Consensus 379 ig~ElgvE~TyPv~E~tSsGll~~ 402 (480)
T KOG2563|consen 379 IGFELGVETTYPVAEGTSSGLLNL 402 (480)
T ss_pred cceeeeeeeccccCCcccceeEEe
Confidence 988887776666666666666554
|
|
| >TIGR00788 fbt folate/biopterin transporter | Back alignment and domain information |
|---|
Probab=99.79 E-value=1e-18 Score=167.24 Aligned_cols=352 Identities=12% Similarity=-0.065 Sum_probs=218.6
Q ss_pred HHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhc-----chHHHHHH
Q 013044 56 FPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILG-----RRRELILA 130 (451)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G-----rr~~~~~~ 130 (451)
++...++..|..........|.+.++ +|++.++++...++..+...+-.+ +|.++||++ ||+.++++
T Consensus 30 ~~~~~y~~qGl~~l~~~~~~~~l~~~-------lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~ 101 (468)
T TIGR00788 30 IGLQVLFVKGIAGLMRLPLSPMLTDD-------LGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLS 101 (468)
T ss_pred HHHHHHHHhhHHHHhhhhhhHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHH
Confidence 33445566777633334445555656 899999999999999999999666 999999998 77777777
Q ss_pred HHHHH-HHHHHHHHhhhHH-HHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHH---HHHHHHHHHHHHHHHHhhh
Q 013044 131 ALLYL-VGALVTALAPDFI-IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLIS---LKEFFIVLGMVGGYGIGSL 205 (451)
Q Consensus 131 ~~l~~-~~~~~~~~~~~~~-~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~---~~~~~~~~G~~~g~~l~~~ 205 (451)
.++.+ ++....+..++.. ...+..++.+++.+...+++.++..|..+ +++....+ ......++|.++|+.+++.
T Consensus 102 ~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~ 180 (468)
T TIGR00788 102 GLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGP 180 (468)
T ss_pred HHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHH
Confidence 76663 4333333335544 44448899999999999999999999998 55544333 3334455899999999999
Q ss_pred hcccccchhHHHhhhHHHHHHHHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHh
Q 013044 206 LVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTE 285 (451)
Q Consensus 206 l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (451)
+.+.. +||..|++.+++.++..+..++++|++.....+. .+ +...... .......+.
T Consensus 181 l~~~~-~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~----~~---~~~~~~~-----------~~~~~~~~~---- 237 (468)
T TIGR00788 181 LLDKT-LTRILFLITAALLLLQLFVSNLSKERRAFVRPRI----GT---YLEMNMA-----------LLTLGVLAN---- 237 (468)
T ss_pred HHHhc-CcchHHHHHHHHHHHHHHHHHhcccccccccccc----cc---cchhhhh-----------hhhhhHHHH----
Confidence 99887 9999999998887776666677777531000000 00 0000000 000000000
Q ss_pred hcccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 013044 286 LSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAV 365 (451)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g 365 (451)
..+........++++..++.+...++.+. ...+. ....|. ...+..|+ ++...+....+.+++.+++..+.+
T Consensus 238 ----~~~~~~~l~~~l~~~~i~~~l~fifl~~~-~~~~~-~~~~f~-~~~~~lG~-s~~~~G~~~~~~~v~~i~g~~~~~ 309 (468)
T TIGR00788 238 ----VKVQILGLRGAIQLLEIAKPLIFIFLSYA-NLPGA-SGSVFC-ATTQCLPG-GPSFSGMSKVVGNLGSLCGVGGYD 309 (468)
T ss_pred ----HHHHHHHHHHHHhcHHHHHHHHHHHHHHh-hcCCC-CceeEE-EEcccCCC-CcchhhhHHHHHHHHHHHHHHHHH
Confidence 00001122333444433332222222111 11111 111111 11135788 999999999999999999999999
Q ss_pred HHhhhcCCchhhhchhHHHHHHHHHHHHhh-hcc----CCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhh
Q 013044 366 LVVERLGRRPLLLGGVSGIVISLFLLGSYY-LFL----DDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRI 440 (451)
Q Consensus 366 ~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (451)
++.+|++.|+++.++.++.+++........ ... ....+.......+...++++ ...|. ..++.+..|++.++
T Consensus 310 ~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~--~~~~~-~~~~~~~~p~~~eg 386 (468)
T TIGR00788 310 RFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQL--KFMPF-LVLLARLCPSGCES 386 (468)
T ss_pred HHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHH--HHccH-HHHHHHhCCCCcee
Confidence 999999999998888877776654322111 000 01223333444455556665 44454 77788899999999
Q ss_pred hhhheeeeec
Q 013044 441 VCSIYCAKLR 450 (451)
Q Consensus 441 ~~~~~~~~~~ 450 (451)
+..++.++++
T Consensus 387 t~~al~~s~~ 396 (468)
T TIGR00788 387 SVFALLASIL 396 (468)
T ss_pred hHHHHHHHHH
Confidence 9998877654
|
The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity. |
| >PF13347 MFS_2: MFS/sugar transport protein | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.3e-18 Score=161.13 Aligned_cols=295 Identities=16% Similarity=0.155 Sum_probs=214.5
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhh----hhcchHH-HHHHHHHHHHHHHHHHHh-h-------hHHHHHHHHH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIAD----ILGRRRE-LILAALLYLVGALVTALA-P-------DFIIMVVGRF 155 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~Grr~~-~~~~~~l~~~~~~~~~~~-~-------~~~~l~~~r~ 155 (451)
+|+++..+|.+..+..+..++..|+.|.++| |+||||. ++++..+.+++.++.... + ....+.+..+
T Consensus 32 ~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~ 111 (428)
T PF13347_consen 32 LGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFYI 111 (428)
T ss_pred cCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHHH
Confidence 7999999999999999999999999999999 8997665 556888888888887766 4 2344677777
Q ss_pred HHHHHHhhhhhhHHHHHHhccC-CCCcchHHHHHHHHHHHHHHHHHHHhhhhccccc------chhHHHhhhHHHHHH-H
Q 013044 156 VFGIGIGLAMHAAPMYIAETAP-TPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVA------GWRYMYGASTPLAVI-M 227 (451)
Q Consensus 156 l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~------~wr~~f~~~~~~~~~-~ 227 (451)
+..++.........++..|..+ +++|.+..+.-..+..+|..+...+...+.+... +|++..++.+++.++ .
T Consensus 112 l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~ 191 (428)
T PF13347_consen 112 LFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFF 191 (428)
T ss_pred HHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHh
Confidence 7899999899999999999997 5789999999998888888766666666553221 699999999888888 4
Q ss_pred HHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhcccchh
Q 013044 228 GMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLK 307 (451)
Q Consensus 228 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (451)
.+..+..+|.++.... +.++..-+..++++++++.++
T Consensus 192 ~i~~~~~ke~~~~~~~-------------------------------------------~~~~~~~~~~~~~~~~nr~~~ 228 (428)
T PF13347_consen 192 LITFFFVKERSVEVTE-------------------------------------------QEKKISLRDSLRSLFRNRPFR 228 (428)
T ss_pred hhhhheeeeccccccc-------------------------------------------cccccccccchhhhcccchHH
Confidence 5555566772110000 000122234567777777666
Q ss_pred HHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHH
Q 013044 308 ALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVIS 387 (451)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 387 (451)
..+....+..+... ....+.+++.+..-. ++...+.......++.+++.++.++++||+|+|+.+..+..+.+++
T Consensus 229 ~l~~~~~~~~~~~~----~~~~~~~y~~~~vl~-~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~ 303 (428)
T PF13347_consen 229 ILLLAFFLQWLAFA----LMNTFLPYYFTYVLG-NEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALG 303 (428)
T ss_pred HHHHHHHHHHhhhh----hhhhHHHHHHHHHhc-CchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHH
Confidence 65555554444332 333344445444322 3456777778889999999999999999999999999999988888
Q ss_pred HHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhh
Q 013044 388 LFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEM 437 (451)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (451)
.+++.+... ++.+...+...+.+.+.+. .....+.+.+|..+.+
T Consensus 304 ~~~~~~~~~---~~~~~~~i~~~l~gi~~~~---~~~~~~a~~ad~id~~ 347 (428)
T PF13347_consen 304 FLLLFFLGP---GSPWLVLILFILAGIGYGA---FFVIPWAMLADVIDYD 347 (428)
T ss_pred HHHHHHHHh---hhHHHHHHHHHHhHhhhcc---cccccccccccchhhH
Confidence 776655421 4667777777777777776 5677888888888754
|
|
| >PRK10429 melibiose:sodium symporter; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=7.3e-18 Score=162.50 Aligned_cols=299 Identities=14% Similarity=0.001 Sum_probs=184.4
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhh----hhcc-hHHHHHHHHHHHHHHHHHHHhhh------HHHHHHHHHHH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIAD----ILGR-RRELILAALLYLVGALVTALAPD------FIIMVVGRFVF 157 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~Gr-r~~~~~~~~l~~~~~~~~~~~~~------~~~l~~~r~l~ 157 (451)
+|+++..+|.+..+.-+.-++..++.|.++| |+|| |+.++++.+..+++..+....++ +..+++..++.
T Consensus 37 ~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~ 116 (473)
T PRK10429 37 VGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILW 116 (473)
T ss_pred cCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHH
Confidence 7999999999999999999999999999999 6698 56667788777777666644331 34566667777
Q ss_pred HHHHhhhhhhHHHHHHhcc-CCCCcchHHHHHHHHHHHHHHHHHHHhhhhcc------cccchhHHHhhhHHHHHH-HHH
Q 013044 158 GIGIGLAMHAAPMYIAETA-PTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD------LVAGWRYMYGASTPLAVI-MGM 229 (451)
Q Consensus 158 G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~------~~~~wr~~f~~~~~~~~~-~~~ 229 (451)
+++.....+...++..|.. ++++|.+..++-....++|..+.+.+...+.+ ...+|+....+.+++.++ ..+
T Consensus 117 ~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~ 196 (473)
T PRK10429 117 GMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTII 196 (473)
T ss_pred HHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHH
Confidence 8888888888889999999 68899999998777677765555544433211 112577777777777666 334
Q ss_pred HhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhcccchhHH
Q 013044 230 GMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKAL 309 (451)
Q Consensus 230 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (451)
..+..+|.++....+. + ++++...+..++.+++++.++..
T Consensus 197 ~~~~~~e~~~~~~~~~---~-------------------------------------~~~~~~~~~~~~~~~~n~~~~~l 236 (473)
T PRK10429 197 TLRNVHEVYSSDNQVS---A-------------------------------------EGSHLTLKDIVALIYKNDQLSCL 236 (473)
T ss_pred HHcCceecCCcccccc---c-------------------------------------cccCCCHHHHHHHHhcCHHHHHH
Confidence 4444666432000000 0 00000111223334455443333
Q ss_pred HHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHH
Q 013044 310 IIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLF 389 (451)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 389 (451)
+...++... .......+.+++.+.... +....+.......++.+++.++.+++.||+|+|+.+..+..+..++.+
T Consensus 237 l~~~~~~~~----~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~ 311 (473)
T PRK10429 237 LGMALAYNI----ASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCG 311 (473)
T ss_pred HHHHHHHHH----HHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHH
Confidence 333222222 222333344444444333 455566666777788999999999999999999998877766555544
Q ss_pred HHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchh
Q 013044 390 LLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFF 435 (451)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (451)
.+.........+.+..++...+.+.+.+. ..+..+.+.+|..+
T Consensus 312 ~~~~~~~~~~~~~~~~~i~~~l~g~~~~~---~~~~~~am~ad~id 354 (473)
T PRK10429 312 VLLLMGLAAPHNALLIVIAGILLNIGTAL---FWVLQVIMVADTVD 354 (473)
T ss_pred HHHHHhccCchhHHHHHHHHHHHHHHHHH---HHHHHHHHHhhhhh
Confidence 43222111223344444444455555554 44556677777755
|
|
| >PRK09669 putative symporter YagG; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.1e-17 Score=157.16 Aligned_cols=291 Identities=14% Similarity=0.006 Sum_probs=184.9
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhh----hcch-HHHHHHHHHHHHHHHHHHHhhh------HHHHHHHHHHH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADI----LGRR-RELILAALLYLVGALVTALAPD------FIIMVVGRFVF 157 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr-~~~~~~~~l~~~~~~~~~~~~~------~~~l~~~r~l~ 157 (451)
+|++..++|.+.++..+..++..|+.|.++|| +||| +.++.+.+..+++.++....++ ++.+++..++.
T Consensus 40 ~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~ 119 (444)
T PRK09669 40 FGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILL 119 (444)
T ss_pred cCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHH
Confidence 89999999999999999999999999999998 7874 5566677777777766555543 45666677777
Q ss_pred HHHHhhhhhhHHHHHHhcc-CCCCcchHHHHHHHHHHHHHHHHHHHhhhhcc------cccchhHHHhhhHHHHHHHH-H
Q 013044 158 GIGIGLAMHAAPMYIAETA-PTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD------LVAGWRYMYGASTPLAVIMG-M 229 (451)
Q Consensus 158 G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~------~~~~wr~~f~~~~~~~~~~~-~ 229 (451)
+.+.......-.++.+|+. ++++|++..++...+..+|..+++.+...+.. ...+|+..+.+.++++++.. +
T Consensus 120 ~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~ 199 (444)
T PRK09669 120 SLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFC 199 (444)
T ss_pred HHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHH
Confidence 7777777777778999998 55789988888888888887777665443321 11278888888888777643 3
Q ss_pred HhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhcccchhHH
Q 013044 230 GMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKAL 309 (451)
Q Consensus 230 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (451)
..+..+|.++. + + +++.+.....+.+++++.++..
T Consensus 200 ~~~~~~e~~~~----~-----~------------------------------------~~~~~~~~~~~~~~~n~~~~~l 234 (444)
T PRK09669 200 CFFMTKERYTP----E-----V------------------------------------DNSSSVWKDLKLLLGNSQWRIM 234 (444)
T ss_pred HhCCeEEecCC----C-----C------------------------------------cCCCCHHHHHHHHhCCchHHHH
Confidence 34444543210 0 0 0001112345666777766655
Q ss_pred HHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHH
Q 013044 310 IIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLF 389 (451)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 389 (451)
+...++...... .......++.+.. ..+............+..+++.++.+++.||+|+|+.+..+..+..++..
T Consensus 235 ~~~~~~~~~~~~----~~~~~~~y~~~~~-~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~ 309 (444)
T PRK09669 235 FIFNVVLLTAVV----TRGGATLYYVNYV-LLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSA 309 (444)
T ss_pred HHHHHHHHHHHH----HHhhhhheeeeee-cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence 544333322221 1112222222222 21334444555566778888889999999999999988877655444332
Q ss_pred HHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchh
Q 013044 390 LLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFF 435 (451)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (451)
.+.. ...++.+...+..++.+.+.+. ..+..+.+.+|..+
T Consensus 310 ~~~~---~~~~~~~~~~~~~~i~g~~~~~---~~~~~~am~ad~~d 349 (444)
T PRK09669 310 LIFF---IPPSNVWLIFALNILFNFIQNL---TTPLQWSMFSDVVD 349 (444)
T ss_pred HHHH---hCcchHHHHHHHHHHHHHHHHH---HHHHHHHHHHhhhh
Confidence 2211 1123444445555555666665 56777788888776
|
|
| >PRK10642 proline/glycine betaine transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.1e-16 Score=153.18 Aligned_cols=176 Identities=16% Similarity=0.025 Sum_probs=136.6
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHH---HHHhhhHHHHHHHHHHHHHHHhhhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALV---TALAPDFIIMVVGRFVFGIGIGLAM 165 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~---~~~~~~~~~l~~~r~l~G~~~~~~~ 165 (451)
+|.+..+.++..+...++..++.++.|+++||+|||+++..+.++..++.+. ...+++...+++++++.|++.+...
T Consensus 281 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 360 (490)
T PRK10642 281 LHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFT 360 (490)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Confidence 6778888888888899999999999999999999999988887654443332 2234567788889999999888777
Q ss_pred hhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhhcccCchHHHHHhh
Q 013044 166 HAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCA 245 (451)
Q Consensus 166 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 245 (451)
.....++.|.+|++.|++++++......++..++|.+.+++.+...+|+.++++..+++++.++..+++||+|+|+.++.
T Consensus 361 g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~pes~~~~~~~~ 440 (490)
T PRK10642 361 GVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTMKETANRPLKGA 440 (490)
T ss_pred HHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccCCCCCCc
Confidence 77888899999999999999975444556667888888888775436888887777777776666677899998654321
Q ss_pred ccccCCccchHHHHHHHHHHHhC
Q 013044 246 MKRKGDMQDLRESAISCLCRLRG 268 (451)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~ 268 (451)
.+.+++.+|+++.++++++
T Consensus 441 ----~~~~~~~~~a~~~l~~~~~ 459 (490)
T PRK10642 441 ----TPAASDIQEAKEILVEHYD 459 (490)
T ss_pred ----cccccchhhHHHHhhcccc
Confidence 1334688899999988873
|
|
| >TIGR01272 gluP glucose/galactose transporter | Back alignment and domain information |
|---|
Probab=99.71 E-value=7.3e-16 Score=139.45 Aligned_cols=238 Identities=15% Similarity=0.094 Sum_probs=159.8
Q ss_pred HHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhccc------------
Q 013044 142 ALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL------------ 209 (451)
Q Consensus 142 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~------------ 209 (451)
+..++++.++++-++.|.|.+...+..+.++++..+++++++.+++.+.++++|..++|++++.+...
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 35678999999999999999999999999999999999999999999999999999999999987731
Q ss_pred ---ccchhHHHhhhHHHHHHHHHHhhcc--cCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHH
Q 013044 210 ---VAGWRYMYGASTPLAVIMGMGMWWL--PASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILT 284 (451)
Q Consensus 210 ---~~~wr~~f~~~~~~~~~~~~~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (451)
..+|+++|++.+.+.++..+.+.+. ||.++ + ++ ++
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~-----~----~~-----~~-------------------------- 124 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQE-----A----DV-----AR-------------------------- 124 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc-----c----cc-----cc--------------------------
Confidence 1279999997776655544444333 43211 0 00 00
Q ss_pred hhcccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHH---cCCCCchhHHHHHHHHHHHHHHHH
Q 013044 285 ELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS---AGFSAASDATRVSILLGLFKLIMT 361 (451)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~s~~~~~~~~~~~~~~~~~~~ 361 (451)
...++....++.++++ ...+ ..+..+...........|.+.|+.+ .|+ ++.+++........+.++|+
T Consensus 125 ----~~~~~~~~~~~~~~~~---~~~l-~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~-s~~~a~~~~s~~~~~~~iGr 195 (310)
T TIGR01272 125 ----VSSGDTTQKTSAFQFT---HLVL-GALGIFVYVGAEVSAGSFLVNFLSDPHALGL-PEDQAAHFTAYTWGGAMVGR 195 (310)
T ss_pred ----cccccccchhhHHhhH---HHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcccCCC-CHHHHHHHHHHHHHHHHHHH
Confidence 0000000112233332 2222 2333333343455677788888864 477 88999999999999999999
Q ss_pred HHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhh
Q 013044 362 GLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEM 437 (451)
Q Consensus 362 ~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (451)
++.+++.||+++|+.+..+..+..++.+++.. .+. ......+.+.+.+.+. ..|.......+..|++
T Consensus 196 ~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~-----~~~-~~~~~~~~l~g~~~s~---i~P~~~s~a~~~~~~~ 262 (310)
T TIGR01272 196 FIGSAVMPMISQGRYLAFNAFLAVLLSIGAAL-----THG-YVAMWFVLALGLFNSI---MFPTIFSLALNALGRH 262 (310)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH-----cCC-HHHHHHHHHHHHHHHH---HHHHHHHHHHhhhhhh
Confidence 99999999999988887766666555433322 112 2223344455555554 5666666665555543
|
Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity. |
| >PRK11462 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.9e-15 Score=143.45 Aligned_cols=290 Identities=12% Similarity=0.046 Sum_probs=179.6
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhh----hcchHH-HHHHHHHHHHHHHHHHHhhh------HHHHHHHHHHH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADI----LGRRRE-LILAALLYLVGALVTALAPD------FIIMVVGRFVF 157 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr~~-~~~~~~l~~~~~~~~~~~~~------~~~l~~~r~l~ 157 (451)
+|+++..+|.+..+.-+.-++..|+.|.++|| +||||. ++++.+..+++.+++-..++ +..+++.-++.
T Consensus 40 ~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~ 119 (460)
T PRK11462 40 FGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLL 119 (460)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHH
Confidence 79999999999999999999999999999996 788655 55676777777766654442 44566677777
Q ss_pred HHHHhhhhhhHHHHHHhccC-CCCcchHHHHHHHHHHHHHHHHHHHhhhhcccc------cchhHHHhhhHHHHHHHH-H
Q 013044 158 GIGIGLAMHAAPMYIAETAP-TPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV------AGWRYMYGASTPLAVIMG-M 229 (451)
Q Consensus 158 G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~------~~wr~~f~~~~~~~~~~~-~ 229 (451)
.++.......-.++..|..+ +++|++..++...+..+|..+++.+...+.+.. .+|+....+.+++.++.. +
T Consensus 120 ~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i 199 (460)
T PRK11462 120 TLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAF 199 (460)
T ss_pred HHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHH
Confidence 88888888888889999996 788999999999999988888777755443321 268887777777766643 3
Q ss_pred HhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhcccchhHH
Q 013044 230 GMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKAL 309 (451)
Q Consensus 230 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (451)
.....+|.++. + . ++...+...+..++++.++..
T Consensus 200 ~~~~~kE~~~~----~----~--------------------------------------~~~~~~~~l~~~~~Nk~~~~l 233 (460)
T PRK11462 200 CFFTTKERVEA----P----P--------------------------------------TTTSMREDLRDIWQNDQWRIV 233 (460)
T ss_pred HHhcceeccCC----C----c--------------------------------------cCCCHHHHHHHHhCChHHHHH
Confidence 33334443210 0 0 000011234455666555544
Q ss_pred HHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHH
Q 013044 310 IIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLF 389 (451)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 389 (451)
.....+.............+|..++ .+ +....+.......++.+++.++++++.||+++|+.+..+..+..+..+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~y~~~y~---~g--~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~ 308 (460)
T PRK11462 234 GLLTIFNILAVCVRGGAMMYYVTWI---LG--TPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISL 308 (460)
T ss_pred HHHHHHHHHHHHHHHhHhhhhhhhh---cC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence 4333333232222222223333332 12 333445567777888999999999999999999887654443333222
Q ss_pred HHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchh
Q 013044 390 LLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFF 435 (451)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (451)
++.+ ....+.+...+..++.+.+.+. ..+..+.+.++..+
T Consensus 309 ~~~~---~~~~~~~~~~~~~~l~g~~~~~---~~~l~~~m~ad~~d 348 (460)
T PRK11462 309 AMFF---VPMQASITMFVFIFVIGVLHQL---VTPIQWVMMSDTVD 348 (460)
T ss_pred HHHH---hchhHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHhHh
Confidence 2211 1122222233333333433333 44555666777666
|
|
| >KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.68 E-value=8.6e-15 Score=135.28 Aligned_cols=187 Identities=20% Similarity=0.220 Sum_probs=140.3
Q ss_pred CCCccchHHHHHHHHHHHhhhhhccccccccccc-ccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhh
Q 013044 42 PENYSVSAAILPFLFPALGGLLYGYDIGSTSCAT-ISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADI 120 (451)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr 120 (451)
..+.+|+..++..+..+ +.+...+++.+.. |.+.+-| .+.+.+..|++.++..++.++++++.|+++.|
T Consensus 28 ~~~t~wrsi~l~~~~sf----l~~v~~sI~~~s~wpYl~~lD------~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k 97 (488)
T KOG2325|consen 28 ERKTNWRSIYLALLNSF----LVAVQFSIYLTSMWPYLQKLD------PTATATFFGLVIAASSLGHAIFSLIFGIWSNK 97 (488)
T ss_pred ccCCchHhHHHHHHHHH----HHhhhheEEEeecchhhhhcC------CCCCcchhhHHHHHHHHHHHhcchhhcccccc
Confidence 34455666666644443 4444444433322 3333310 46788899999999999999999999999999
Q ss_pred hcc-hHHHHHHHHHHHHHHHHH-HHh---h-hHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHH
Q 013044 121 LGR-RRELILAALLYLVGALVT-ALA---P-DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVL 194 (451)
Q Consensus 121 ~Gr-r~~~~~~~~l~~~~~~~~-~~~---~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~ 194 (451)
.|. |+.++.+.++..+|+++. ++. + .-+.++++|++.|+|.| .....-+|+++....++|.++++....+..+
T Consensus 98 ~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~-n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vl 176 (488)
T KOG2325|consen 98 TGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVG-NFAVLRAYIADASTVEDRPRAFAATSGGFVL 176 (488)
T ss_pred cCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcc-cHHHHHHHHHhccCccchHHHHHHhhhHHHH
Confidence 987 888999999999999999 432 3 57889999999999977 7778899999999999999999999998999
Q ss_pred HHHHHHHHhhhhcccc------------cchhHHHhhhHHHHHH-HHHHhhcccCchH
Q 013044 195 GMVGGYGIGSLLVDLV------------AGWRYMYGASTPLAVI-MGMGMWWLPASPR 239 (451)
Q Consensus 195 G~~~g~~l~~~l~~~~------------~~wr~~f~~~~~~~~~-~~~~~~~~~e~~~ 239 (451)
|.++||.++..+.... .-+..+-|+.+++.++ .+++.++++|.++
T Consensus 177 g~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 177 GIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYR 234 (488)
T ss_pred HHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeeccc
Confidence 9999998887765310 1133456777777777 5555666777654
|
|
| >PRK09848 glucuronide transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2e-15 Score=144.87 Aligned_cols=302 Identities=12% Similarity=-0.010 Sum_probs=175.9
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhh----cchHHH-HHHHHHHHHHHHHHH-Hh----h--hHHHHHHHHHH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADIL----GRRREL-ILAALLYLVGALVTA-LA----P--DFIIMVVGRFV 156 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~----Grr~~~-~~~~~l~~~~~~~~~-~~----~--~~~~l~~~r~l 156 (451)
+|++..++|.+.++..+..++..++.|+++||. ||||.+ +.+.+...+..++.. .. + ..+.+++..++
T Consensus 39 ~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (448)
T PRK09848 39 AGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLTYMG 118 (448)
T ss_pred cCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHHHHHHH
Confidence 799999999999999999999999999999996 777754 555554544444432 11 1 12334555677
Q ss_pred HHHHHhhhhhhHHHHHHhccCC-CCcchHHHHHHHH-----HHHHHHHHHHHhhhhcccc-cchhHHHhhhHHHHHH-HH
Q 013044 157 FGIGIGLAMHAAPMYIAETAPT-PMRGQLISLKEFF-----IVLGMVGGYGIGSLLVDLV-AGWRYMYGASTPLAVI-MG 228 (451)
Q Consensus 157 ~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~-----~~~G~~~g~~l~~~l~~~~-~~wr~~f~~~~~~~~~-~~ 228 (451)
.+++.+...+...++..+...+ ++|.+..++-..+ ..++..++|.++....... .+|.....+.++++++ .+
T Consensus 119 ~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~v~~~~~~~ 198 (448)
T PRK09848 119 LGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGMVLYF 198 (448)
T ss_pred HHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHH
Confidence 7888888887777777777744 6788876665433 3355666666665432211 0222222233333333 22
Q ss_pred HHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhcccchhH
Q 013044 229 MGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKA 308 (451)
Q Consensus 229 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (451)
+.....||+++. +. ++...+..++.+++++.+..
T Consensus 199 ~~~~~~~e~~~~---~~-------------------------------------------~~~~~~~~~~~l~~n~~f~~ 232 (448)
T PRK09848 199 ICFKSTRENVVR---IV-------------------------------------------AQPSLKISLQTLKRNRPLFM 232 (448)
T ss_pred HHHcCcEeccCC---Cc-------------------------------------------cCCCHHHHHHHHhCCchHHH
Confidence 223334554210 00 00011123556777765555
Q ss_pred HHHHHHHHHHHHhhchhHHHHhHHHHHHH-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHH
Q 013044 309 LIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVIS 387 (451)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 387 (451)
..+...+.... ......+.++++++ .|. +....++......++.+++.++.+++.||+|+|+.+..+..+..++
T Consensus 233 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~ 307 (448)
T PRK09848 233 LCIGALCVLIS----TFAVSASSLFYVRYVLND-TGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCG 307 (448)
T ss_pred HHHHHHHHHHH----HHHHhhhheeeEeeecCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 44433333222 22333445555553 354 5554555555556778889999999999999999999888777776
Q ss_pred HHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhh-------hhhhhhheee
Q 013044 388 LFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEM-------TRIVCSIYCA 447 (451)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 447 (451)
.+.+.+. ...+.+...+...+.+.+.+. ..+....+..+..|.+ .+|...++.+
T Consensus 308 ~~~~~~~---~~~~~~~~~~~~~l~g~G~~~---~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~ 368 (448)
T PRK09848 308 YLLFFWV---SVWSLPVALVALAIASIGQGV---TMTVMWALEADTVEYGEYLTGVRIEGLTYSLFS 368 (448)
T ss_pred HHHHHHc---CchhHHHHHHHHHHHHHHHHH---HHHHHHHHHHHhhhhhHHhhCccchhHHHHHHH
Confidence 6554321 122334444445555555555 3455566666766644 3466665543
|
|
| >TIGR00880 2_A_01_02 Multidrug resistance protein | Back alignment and domain information |
|---|
Probab=99.68 E-value=5e-16 Score=123.83 Aligned_cols=136 Identities=27% Similarity=0.453 Sum_probs=121.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCC
Q 013044 100 TSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTP 179 (451)
Q Consensus 100 ~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 179 (451)
.+.+.++..++.++.|++.||+|||+.+..+..+..++.++..+.++++.+.+.+++.|++.+...+...+++.|.+|++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 34567788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHH-HhhcccC
Q 013044 180 MRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGM-GMWWLPA 236 (451)
Q Consensus 180 ~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~-~~~~~~e 236 (451)
+|++..++......+|..+++.+++.+.+.. +|++.+++.+++.++..+ ..++.||
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGPPLGGVLAQFL-GWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhHHhHHHHhccc-chHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 9999999999999999999999999998876 899999998888777444 4444454
|
|
| >COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.4e-14 Score=132.03 Aligned_cols=294 Identities=18% Similarity=0.087 Sum_probs=207.9
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhh----hcch-HHHHHHHHHHHHHHHHHHHhhh------HHHHHHHHHHH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADI----LGRR-RELILAALLYLVGALVTALAPD------FIIMVVGRFVF 157 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr-~~~~~~~~l~~~~~~~~~~~~~------~~~l~~~r~l~ 157 (451)
+|+++..+|.+..+--+--++.-|+.|.+.|| +||+ +.++.+.+..++.+.++-.+++ ....++...+.
T Consensus 43 ~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~ 122 (467)
T COG2211 43 FGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLL 122 (467)
T ss_pred cCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHH
Confidence 79999999999999999999999999999996 7865 4567787889998888888774 45666778889
Q ss_pred HHHHhhhhhhHHHHHHhcc-CCCCcchHHHHHHHHHHHHHHHHHHHhhhhcc----c--ccchhHHHhhhHHHHHHH-HH
Q 013044 158 GIGIGLAMHAAPMYIAETA-PTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD----L--VAGWRYMYGASTPLAVIM-GM 229 (451)
Q Consensus 158 G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~----~--~~~wr~~f~~~~~~~~~~-~~ 229 (451)
+++.......-.++..|+. +++||.+..++-+.+.++|..+...+...+.. . ..||+....+.++++++. +.
T Consensus 123 ~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~ 202 (467)
T COG2211 123 GLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLF 202 (467)
T ss_pred HHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHH
Confidence 9999988888888999998 46889999999999999987666655554442 1 338888888888887774 44
Q ss_pred HhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccc----hhhhhcccc
Q 013044 230 GMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVS----LREVFHGKC 305 (451)
Q Consensus 230 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 305 (451)
+++-++|.+... +. .++..+.+ ...+++++.
T Consensus 203 ~~~~v~ER~~~~--~~-------------------------------------------~~~~~~~~~~~~~~~~~~Nrp 237 (467)
T COG2211 203 CFFNVKERVVET--QP-------------------------------------------TKTGVKLKLKDSFLLIFKNRP 237 (467)
T ss_pred HHHHhhcccCcc--cc-------------------------------------------CcccccccHHHHHHHHHccch
Confidence 444466654300 00 01111222 335667765
Q ss_pred hhHHHHHHHHHHHHHhhchhHHHHhHHHHHH-HcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHH
Q 013044 306 LKALIIGAGLVLFQQITGQPSVLYYAASILQ-SAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGI 384 (451)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 384 (451)
++...+..++.+.. .+.......+|.+ ..|. +.............+.+++.++..++.+|+|+|+++..+.++.
T Consensus 238 ~~~~l~~~l~~~~~----~~i~~s~~~yy~~y~lg~-~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~ 312 (467)
T COG2211 238 LLLLLLMNLLLFIA----FNIRGSIMVYYVTYVLGD-PELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLL 312 (467)
T ss_pred HHHHHHHHHHHHHH----HHHHhhhhheeEEEEcCC-hHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHH
Confidence 55555433333222 2233333333333 2355 6667777888888888888999999999999999999998888
Q ss_pred HHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhh
Q 013044 385 VISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMT 438 (451)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (451)
.++.+++.+. ..++.+..++..++...+.+. ..++.+.+.+|..+..+
T Consensus 313 ~i~~~~~~f~---~~~~~~l~~~~~~i~~~g~~~---~~~l~wam~~d~vDyge 360 (467)
T COG2211 313 AVGYLLLYFT---PAGSVVLIVVALIIAGVGTGI---ANPLPWAMVADTVDYGE 360 (467)
T ss_pred HHHHHHHHhh---cCcchHHHHHHHHHHHHHhhc---cccccHHHhcchhhHHH
Confidence 8877765443 234455555555666677776 78888999988876543
|
|
| >PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions | Back alignment and domain information |
|---|
Probab=99.65 E-value=7.2e-14 Score=132.63 Aligned_cols=309 Identities=15% Similarity=0.052 Sum_probs=202.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHH-HHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHhhhhhhHH
Q 013044 93 SVEIGLITSGSLYGALIGSILAFNIADILGRRRELIL-AALLYLVGALVTALA--PDFIIMVVGRFVFGIGIGLAMHAAP 169 (451)
Q Consensus 93 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~-~~~l~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~ 169 (451)
.+..++..++..+..++..++.|.++|+-|+||.++. ...+..+.+.+..+. ++++...+.-++.-++.+.......
T Consensus 69 ~s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyn 148 (477)
T PF11700_consen 69 SSLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYN 148 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456788999999999999999999999887766554 444455566666663 3455555566666778888889999
Q ss_pred HHHHhccCCCCc--------------------------chHHHHHHHHHHHHHHHHHHHhhhhcccc-------cchhHH
Q 013044 170 MYIAETAPTPMR--------------------------GQLISLKEFFIVLGMVGGYGIGSLLVDLV-------AGWRYM 216 (451)
Q Consensus 170 ~~i~~~~~~~~r--------------------------~~~~~~~~~~~~~G~~~g~~l~~~l~~~~-------~~wr~~ 216 (451)
+++.|..+++++ ++..+.-.+...+|.++..++.-.+.... .+-|..
T Consensus 149 a~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~ 228 (477)
T PF11700_consen 149 AYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVA 228 (477)
T ss_pred HHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHH
Confidence 999999999888 89999988888888888777766654221 135888
Q ss_pred HhhhHHHHHH-HHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhccccccccc
Q 013044 217 YGASTPLAVI-MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEV 295 (451)
Q Consensus 217 f~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (451)
+.+.++.-++ .+...+++||.|+.. + ... ...-.....+ +-..
T Consensus 229 ~~~~a~ww~vfsiP~~~~~~~~~~~~---~---~~~---~~~~~~~g~~---------------------------~l~~ 272 (477)
T PF11700_consen 229 FLIVALWWLVFSIPLFLWLPDRPGPR---P---LPS---GSSYLRFGFK---------------------------RLWR 272 (477)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCC---C---CCc---chhHHHHHHH---------------------------HHHH
Confidence 8888887666 555566677775410 0 000 0000000000 0011
Q ss_pred chhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHH-HcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCc
Q 013044 296 SLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQ-SAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRR 374 (451)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~ 374 (451)
.++++.+. +-+..+++.++...-+.+.+......+.+ ..|+ +..+.........+..++|+++.+++.||+|.|
T Consensus 273 t~k~~~~~----~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~-s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k 347 (477)
T PF11700_consen 273 TFKEIRKL----RQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGM-STTQLIVFGLVVQIVAIIGALLFGWLQDRFGPK 347 (477)
T ss_pred HHHHHHhC----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 22233222 22222333444334455566666666655 7899 889999999999999999999999999999988
Q ss_pred --hhhhchhHHHHHHHHHHHHh---h-hccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhhee
Q 013044 375 --PLLLGGVSGIVISLFLLGSY---Y-LFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYC 446 (451)
Q Consensus 375 --~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (451)
+++..+.....+..+ .+.+ . ....++.+...+..++++.+.+. ..+..-++..++.|+++.+...|+.
T Consensus 348 ~~~~l~~~l~~~~~i~~-~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~---~qs~sRs~~~~LiP~g~e~efFgly 421 (477)
T PF11700_consen 348 TKRTLLISLILWIIIPL-YGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGG---IQSASRSLFSRLIPPGREAEFFGLY 421 (477)
T ss_pred hhHHHHHHHHHHHHHHH-HHHHHhhhcccCcccHHHHHHHHHHHHHHhhh---HHHHHHHHHHHhCCCchhhHHHHHH
Confidence 676665554422222 1111 0 01124555555556666666664 7788889999999999888776653
|
Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins. |
| >PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.2e-15 Score=139.29 Aligned_cols=300 Identities=16% Similarity=0.149 Sum_probs=182.8
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHH--HHHHHHH-HH----hhhH-HHHHHHHHHHHHH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY--LVGALVT-AL----APDF-IIMVVGRFVFGIG 160 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~--~~~~~~~-~~----~~~~-~~l~~~r~l~G~~ 160 (451)
.|++.+++|.+.++..+...+.+++.|.++||+|.||-++..+.+. ..+.... .+ ..|+ ...+++-...|++
T Consensus 38 ~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~ 117 (412)
T PF01306_consen 38 AGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLV 117 (412)
T ss_dssp H---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTT
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5999999999999999999999999999999999766544333222 2222221 22 2333 2344444555666
Q ss_pred HhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhhcc-cCchH
Q 013044 161 IGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWL-PASPR 239 (451)
Q Consensus 161 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~-~e~~~ 239 (451)
.....|+.-+++.++. ++.+.=.|-.-+..++|.+++..++|.+.+. +-+..||+....+++..++.++. |+.++
T Consensus 118 f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i--~p~~~fwi~s~~~~il~lll~~~~~~~~~ 193 (412)
T PF01306_consen 118 FNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNI--NPNIIFWIASAAAIILLLLLLLLKPDVPP 193 (412)
T ss_dssp TTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHSS---SSS
T ss_pred HcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeee--CccHHHHHHHHHHHHHHHHHHHcCCcCch
Confidence 6666777777766664 3345566777788899999999999998774 56788888777666644443333 33322
Q ss_pred HHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccc---cchhhhhcccchhHHHHHHHHH
Q 013044 240 WLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKE---VSLREVFHGKCLKALIIGAGLV 316 (451)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 316 (451)
... ..|.. ..++++ .+..+++|++..+...+.....
T Consensus 194 ~~~------~~~~~-----------------------------------~~~~~~~~~~~~~~l~k~~~fw~~~l~v~g~ 232 (412)
T PF01306_consen 194 QAE------VADAL-----------------------------------GAKKDKVSLKDVLSLFKMRNFWFFVLFVIGV 232 (412)
T ss_dssp SS-------SSTTS-----------------------------------SS------HHHHHHHTTSHHHHHHHHHHHHH
T ss_pred hhh------hhccc-----------------------------------ccCCCCCcHHHHHHHhcchhHHHHHHHHHHH
Confidence 000 00000 001111 2234566665544443332222
Q ss_pred HHHHhhchhHHHHhHHHHH----HHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHHHHH
Q 013044 317 LFQQITGQPSVLYYAASIL----QSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLG 392 (451)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~----~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~ 392 (451)
.. .+..+-...+.|+ ++.+. +....|++.+...+..++.-.+.+++.+|+|.|+.++++..++.+=....+
T Consensus 233 ~~----~Y~vfdqqf~~y~~~~f~~~~~-g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~ 307 (412)
T PF01306_consen 233 AA----IYDVFDQQFPIYFASFFQSAGQ-GNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSG 307 (412)
T ss_dssp HH----HHHHHHHHHHHHHHHTSSSHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred HH----HHHHHHHHHHHHHHHHhccccc-ChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHh
Confidence 11 1222222233333 33333 446688899999999999999999999999999999999998888877776
Q ss_pred HhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhhee
Q 013044 393 SYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYC 446 (451)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (451)
+ .++++.+...-.+-+.-+.. ......=++.+.+|++..++...+.
T Consensus 308 ~-----~~~~~~i~~~klLH~~e~~l---~lva~fkYI~~~fd~rlsAt~y~v~ 353 (412)
T PF01306_consen 308 F-----ATNPWVISLIKLLHALEFPL---LLVAAFKYITAHFDKRLSATLYLVG 353 (412)
T ss_dssp T-------SHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHS-GGGHHHHHHHH
T ss_pred h-----hcchHHHHHHHHHHHHHHHH---HHHHHHHHHHHhCCHhHHHHHHHHH
Confidence 5 36677777666666666665 3333456777888888877766553
|
The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A. |
| >COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.8e-14 Score=129.60 Aligned_cols=350 Identities=16% Similarity=0.063 Sum_probs=211.8
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhh-cchHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHhhhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADIL-GRRRELILAALLYLVGALVTALAP--DFIIMVVGRFVFGIGIGLAM 165 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~l~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~ 165 (451)
+|.++++..-+.+.|..-.-...+++|+++||+ |+|+.++.|.++..+|.++.+.+. +...++++-++.++|.|..-
T Consensus 56 Lg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K 135 (498)
T COG3104 56 LGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFK 135 (498)
T ss_pred CCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhcccccc
Confidence 679999999999999988899999999999995 999999999999999999999984 78899999999999999999
Q ss_pred hhHHHHHHhccCCC--CcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhhcccCchHHHHH
Q 013044 166 HAAPMYIAETAPTP--MRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLL 243 (451)
Q Consensus 166 ~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~ 243 (451)
+...+++.|.+|++ +|-..++++.++.++|..++|++.+++.+.. ||+..|...++-....++.++..+..-.....
T Consensus 136 ~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~-g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~ 214 (498)
T COG3104 136 PNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINY-GWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGG 214 (498)
T ss_pred ccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHHHHHccchhcCCCC
Confidence 99999999999753 4788889999999999999999999999998 99999999888777755555544321110000
Q ss_pred hhccccCCccchHHHHH----HHHHHH-hC-CCCCC-CCchhHHHHHHhh---cccccccc--cchhhhhcccchhHHHH
Q 013044 244 CAMKRKGDMQDLRESAI----SCLCRL-RG-QSIGD-SAPTEVDEILTEL---SYVGEDKE--VSLREVFHGKCLKALII 311 (451)
Q Consensus 244 ~~~~~~~~~~~~~~~~~----~~~~~~-~~-~~~~~-~~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~~~~~~~~ 311 (451)
++++...+......... ...... -. .+.+. ............. .+....++ ...++++ ..-++++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~---~~~~Lfl 291 (498)
T COG3104 215 VPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRRLL---AAIPLFL 291 (498)
T ss_pred CCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHH---HHHHHHH
Confidence 00000000000000000 000000 00 00000 0000000000000 00000000 1111111 1122333
Q ss_pred HHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCc--h-----hhhchhHHH
Q 013044 312 GAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRR--P-----LLLGGVSGI 384 (451)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~--~-----~~~~~~~~~ 384 (451)
...+++...--....++.|.....++..+.-.....+..+...+..++.+++..++..+.+++ . -+-++..++
T Consensus 292 ~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~ 371 (498)
T COG3104 292 FAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILA 371 (498)
T ss_pred HHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHH
Confidence 333333332222334444444333221111234566777788888888888888777774433 1 234555566
Q ss_pred HHHHHHHHHhhhcc-----CCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhhe
Q 013044 385 VISLFLLGSYYLFL-----DDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIY 445 (451)
Q Consensus 385 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (451)
+.+.+++....... ..+.++.+...++..++--+ ..|+...++....|+...+..+++
T Consensus 372 g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~---iSpvGLs~~t~laP~~~~s~~ma~ 434 (498)
T COG3104 372 GLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELF---ISPVGLSMVTKLAPPALKSFIMAM 434 (498)
T ss_pred HHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHH---hCHHHHHHHHHhChHHHHHHHHHH
Confidence 66666555441111 12345555555555555554 789999999999999888877653
|
|
| >PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs) | Back alignment and domain information |
|---|
Probab=99.62 E-value=3e-17 Score=157.70 Aligned_cols=309 Identities=17% Similarity=0.202 Sum_probs=3.0
Q ss_pred HHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHH
Q 013044 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (451)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~ 134 (451)
+.+++..+.+....+.....+.++++. |+++.++.|++.+.+-++..+..++..++.+|..|-|.+-+|.++.
T Consensus 6 ~~~~~~~~~q~~~~g~~~~~lttiErR-------F~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~ 78 (539)
T PF03137_consen 6 VFLCLLGLFQMMVSGYVNSSLTTIERR-------FGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLM 78 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHH
Confidence 344555566677788888889999998 9999999999999999999999999999999998999999999999
Q ss_pred HHHHHHHHHhh--------------------------------------------------hHHHHHHHHHHHHHHHhhh
Q 013044 135 LVGALVTALAP--------------------------------------------------DFIIMVVGRFVFGIGIGLA 164 (451)
Q Consensus 135 ~~~~~~~~~~~--------------------------------------------------~~~~l~~~r~l~G~~~~~~ 164 (451)
++|++++++-+ -+..+++++++.|+|....
T Consensus 79 ~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl 158 (539)
T PF03137_consen 79 GLGSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPL 158 (539)
T ss_dssp -------------------------------------------------------------------------SSS----
T ss_pred HHHHHHHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCC
Confidence 99999886510 0257889999999999999
Q ss_pred hhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccc---------------------cchhHHHhhhHHH
Q 013044 165 MHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV---------------------AGWRYMYGASTPL 223 (451)
Q Consensus 165 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~---------------------~~wr~~f~~~~~~ 223 (451)
++...+|+.|..++++-+..+|+..+...+|.++|.++++.+...+ +.|..-|++.+.+
T Consensus 159 ~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~ 238 (539)
T PF03137_consen 159 YTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGIL 238 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999876411 1255556666666
Q ss_pred HHHHHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhcc
Q 013044 224 AVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHG 303 (451)
Q Consensus 224 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (451)
.++..+.++++|+.-+...+.. ++.+.+.+.++. ..++...+.++. .......+.-....+++++|
T Consensus 239 ~~l~aipl~~FPk~lp~~~~~~--~~~~~~~~~~~~-----------~~~~~~~~~~~~-~~~~~~~~df~~~l~~Ll~N 304 (539)
T PF03137_consen 239 LFLSAIPLFFFPKKLPGTSERQ--EEKESSERKEED-----------SDKDSFKDPKSK-KSFGKSIKDFPKALKRLLTN 304 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHcCCccCCCccccc--chhhhhhcchhh-----------hhhhcccccccc-cchhhhhhhHHHHHHHHhcC
Confidence 6665566666665432110000 000000000000 000000000000 00000011112334455554
Q ss_pred cchhHHHHHHHHHHHHHhhchhHHHHhHHHHHH-HcCCCCchhHHHHHHHH-HHHHHHHHHHHHHHhhhcC--Cchhhhc
Q 013044 304 KCLKALIIGAGLVLFQQITGQPSVLYYAASILQ-SAGFSAASDATRVSILL-GLFKLIMTGLAVLVVERLG--RRPLLLG 379 (451)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~-~~~~~~~~~~~g~l~d~~g--~~~~~~~ 379 (451)
+.++...+...........+..|.|.|+| +++. ++.++..+.... ..+.++|.+++|++.+|++ .|+.+..
T Consensus 305 ----p~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~-sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~ 379 (539)
T PF03137_consen 305 ----PVFMCLILAGVFESFIVSGFATFLPKYLESQFGL-SASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKF 379 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHH
Confidence 44555555555555566678889999987 4677 777777666444 4477788999999999985 3455444
Q ss_pred hhHHHHHHHH
Q 013044 380 GVSGIVISLF 389 (451)
Q Consensus 380 ~~~~~~~~~~ 389 (451)
..+...++.+
T Consensus 380 ~~v~~~v~~~ 389 (539)
T PF03137_consen 380 CIVVSIVSVI 389 (539)
T ss_dssp ----------
T ss_pred HHHHHHHHHH
Confidence 4444444433
|
Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P. |
| >KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.61 E-value=8.5e-15 Score=140.83 Aligned_cols=300 Identities=17% Similarity=0.204 Sum_probs=213.5
Q ss_pred HHHHHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHH
Q 013044 52 LPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAA 131 (451)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~ 131 (451)
...+++++..+.+++..+.+...+.++++. |+++.++.|++.+.+-++..+...+..+.+-|..|-|.+-+|.
T Consensus 97 ~fl~~l~~~~~~q~l~~~y~~s~IttiErR-------F~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~ 169 (735)
T KOG3626|consen 97 MFLVLLSLAAFAQGLYVGYFNSVITTIERR-------FKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGL 169 (735)
T ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhhhhhh-------cCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeech
Confidence 334566777788888888899999999988 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhh-------------------h--------------------------------H-HHHHHHHHHHHH
Q 013044 132 LLYLVGALVTALAP-------------------D--------------------------------F-IIMVVGRFVFGI 159 (451)
Q Consensus 132 ~l~~~~~~~~~~~~-------------------~--------------------------------~-~~l~~~r~l~G~ 159 (451)
++.+++++++++-+ + + ..++++.++.|+
T Consensus 170 ~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GI 249 (735)
T KOG3626|consen 170 VLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGI 249 (735)
T ss_pred hHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhc
Confidence 99999999998621 0 1 267788999999
Q ss_pred HHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccc------------------cchhHHHhhhH
Q 013044 160 GIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV------------------AGWRYMYGAST 221 (451)
Q Consensus 160 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~------------------~~wr~~f~~~~ 221 (451)
|....++...+|+.|...+++-...+|+......+|.++|.++++++...+ +-|..-|++.+
T Consensus 250 G~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g 329 (735)
T KOG3626|consen 250 GATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICG 329 (735)
T ss_pred CCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999987411 13666677778
Q ss_pred HHHHHHHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhh
Q 013044 222 PLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVF 301 (451)
Q Consensus 222 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (451)
.+.++..+.++++|...+...++ ...+..+..+..+............. ++-+...+.++
T Consensus 330 ~~~~~~a~p~f~fPk~lp~~~~~-------------~~~~~~~~~k~~~~~~~~~~~~~~~i-------kdfp~s~~~ll 389 (735)
T KOG3626|consen 330 ALLLFSAVPLFFFPKELPKSQKR-------------KRARDLHVLKTESGGAKSDKTFGKKI-------KDFPKSIKRLL 389 (735)
T ss_pred HHHHHHHHHHHhCcccCcccccc-------------chhhhhcccccccccccCCcchhhhH-------HHHHHHHHHHh
Confidence 88777777778887654311000 00000000000000000000000000 00112344455
Q ss_pred cccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHH-HcCCCCchhHHHHHH-HHHHHHHHHHHHHHHHhhhcCC--chhh
Q 013044 302 HGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQ-SAGFSAASDATRVSI-LLGLFKLIMTGLAVLVVERLGR--RPLL 377 (451)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~-~~~~~~~~~~~~~g~l~d~~g~--~~~~ 377 (451)
++ ++++...+........+..+..|+|.|++ ++|. ++..+..+.. +...+..+|.+++|++++|+.- |...
T Consensus 390 ~N----~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~-sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a 464 (735)
T KOG3626|consen 390 SN----PIFMLVVLASVIESLAITGYITFLPKYLETQFGI-SASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAA 464 (735)
T ss_pred cC----chHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCC-CHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHH
Confidence 54 45555556666666667788889999997 5688 7777777774 4455667778899999998863 4444
Q ss_pred hchhHH
Q 013044 378 LGGVSG 383 (451)
Q Consensus 378 ~~~~~~ 383 (451)
.+.++.
T Consensus 465 ~~~~~~ 470 (735)
T KOG3626|consen 465 KFVIVC 470 (735)
T ss_pred HHHHHH
Confidence 443333
|
|
| >PRK09528 lacY galactoside permease; Reviewed | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.9e-15 Score=140.58 Aligned_cols=148 Identities=14% Similarity=0.179 Sum_probs=129.4
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHH
Q 013044 90 DLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAP 169 (451)
Q Consensus 90 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 169 (451)
+.+..+.|++.++..++..++.+++|++.||+|||+.+..+.++.+++.++.++++|.+.+++.+++.|++.+...+...
T Consensus 258 ~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 337 (420)
T PRK09528 258 EQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVF 337 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55667889999999999999999999999999999999999999999999999999999999999999999988888888
Q ss_pred HHHHhccCCCCcchHHHH-HHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHH-HHHHhhcccCch
Q 013044 170 MYIAETAPTPMRGQLISL-KEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI-MGMGMWWLPASP 238 (451)
Q Consensus 170 ~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~-~~~~~~~~~e~~ 238 (451)
.++.|.+|++.|+...+. .+....+|.++++.+.|++.+.. |||..|.+.+++.++ ..+..+.+++++
T Consensus 338 ~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~-G~~~~f~~~~~~~~i~~~~~~~~~~~~~ 407 (420)
T PRK09528 338 KYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSI-GFQGTYLILGGIVLLFTLISVFTLSGDR 407 (420)
T ss_pred HHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhh-CchHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 999999999999887665 67778899999999999999987 999999998888776 444444455443
|
|
| >PRK15011 sugar efflux transporter B; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=7.5e-14 Score=131.64 Aligned_cols=146 Identities=13% Similarity=0.107 Sum_probs=126.0
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 168 (451)
++.++.+.+++.+...++..++.+++|+++||+|||+.+..+.+...+........++.+.+++.+++.+++.+...+..
T Consensus 247 ~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~ 326 (393)
T PRK15011 247 LHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIG 326 (393)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 68899999999888888888999999999999999998888777766665555667888888889999999888877888
Q ss_pred HHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhhcccC
Q 013044 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPA 236 (451)
Q Consensus 169 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e 236 (451)
..+..|..| ++|+++.++.+....+|..+++.+++.+.+.. +|+..|++.+++.++..+..++.||
T Consensus 327 ~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 327 MLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIW-NYHAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhhcC
Confidence 888899988 46999999999999999999999999999987 9999999988888887676666664
|
|
| >TIGR01299 synapt_SV2 synaptic vesicle protein SV2 | Back alignment and domain information |
|---|
Probab=99.57 E-value=4.9e-14 Score=139.87 Aligned_cols=141 Identities=18% Similarity=0.096 Sum_probs=125.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhc
Q 013044 96 IGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAET 175 (451)
Q Consensus 96 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 175 (451)
..+...+..++..++.++.|+++||+|||++++++.++.+++.++.++.++...+++.+++.|++.++.++...++++|+
T Consensus 597 ~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl 676 (742)
T TIGR01299 597 IYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVEL 676 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556777899999999999999999999999999999999999999999888889999999999888999999999999
Q ss_pred cCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhhcccCch
Q 013044 176 APTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASP 238 (451)
Q Consensus 176 ~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~ 238 (451)
+|.++|++++|+..+...+|.++||.+++.+.+. +...+|++.+++.++..++.+++||+.
T Consensus 677 ~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~--~~~~pf~i~a~~lll~~ll~~~LPET~ 737 (742)
T TIGR01299 677 YPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI--TKAAPILFASAALACGGLLALKLPDTR 737 (742)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 9999999999999999999999999999988764 466788888887777666666778864
|
This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices. |
| >TIGR00889 2A0110 nucleoside transporter | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.5e-14 Score=137.14 Aligned_cols=146 Identities=13% Similarity=0.210 Sum_probs=126.2
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhh----hHHHHHHHHHHHHHHHhhhhhh
Q 013044 92 SSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP----DFIIMVVGRFVFGIGIGLAMHA 167 (451)
Q Consensus 92 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~----~~~~l~~~r~l~G~~~~~~~~~ 167 (451)
+.++.+...++..++..++.++.|+++||+|||+++.++.++.+++..+..... +++.+++.+++.|++.+...+.
T Consensus 249 ~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~ 328 (418)
T TIGR00889 249 VVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNIS 328 (418)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 457789999999999999999999999999999999999999998877776632 2466788899999999988999
Q ss_pred HHHHHHhccCCCCcchHHHHHH-HHHHHHHHHHHHHhhhhcccc-----cchhHHHhhhHHHHHH-HHHHhhcccCc
Q 013044 168 APMYIAETAPTPMRGQLISLKE-FFIVLGMVGGYGIGSLLVDLV-----AGWRYMYGASTPLAVI-MGMGMWWLPAS 237 (451)
Q Consensus 168 ~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~l~~~l~~~~-----~~wr~~f~~~~~~~~~-~~~~~~~~~e~ 237 (451)
...++.|++|+++|+++.++.+ ...++|.++||+++|.+.+.. .||+..|.+.+++.++ .++..++++|+
T Consensus 329 ~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 329 GSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 9999999999999999999997 678999999999999998863 2699999998888777 55555667766
|
This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli. |
| >TIGR00890 2A0111 Oxalate/Formate Antiporter | Back alignment and domain information |
|---|
Probab=99.55 E-value=4.8e-14 Score=132.41 Aligned_cols=138 Identities=14% Similarity=0.095 Sum_probs=123.1
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhH--HHHHHHHHHHHHHHhhhhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDF--IIMVVGRFVFGIGIGLAMH 166 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~--~~l~~~r~l~G~~~~~~~~ 166 (451)
++.++.+.+++.+.+.++..++.++.|++.||+|||+.+.++.++.+++.++..+.++. ..+++..++.|++.+...+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 314 (377)
T TIGR00890 235 LGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTIS 314 (377)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchh
Confidence 68888899999999999999999999999999999999999999999988888777643 3455667888999888888
Q ss_pred hHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHH
Q 013044 167 AAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIM 227 (451)
Q Consensus 167 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~ 227 (451)
....++.|.+|+++|+++.++......+|..++|.+.+.+.+.. ||++.|++.+++.++.
T Consensus 315 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~-g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 315 LFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEI-GFEYTFIVTGAFALTS 374 (377)
T ss_pred ccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhh-chhhHHHHHHHHHHHh
Confidence 88889999999999999999999999999999999999999887 9999999888776653
|
|
| >PRK05122 major facilitator superfamily transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.5e-13 Score=130.06 Aligned_cols=141 Identities=21% Similarity=0.239 Sum_probs=124.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHh
Q 013044 95 EIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAE 174 (451)
Q Consensus 95 ~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 174 (451)
+.++..+.+.++..++.++.|++.||+|+|+.+..+..+.+++.++..+.++.+.+++.+++.|++.+...+.....+.|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~ 329 (399)
T PRK05122 250 GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVK 329 (399)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 45667788889999999999999999999999999999999988888888898888899999999999888888888899
Q ss_pred ccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhhcccC
Q 013044 175 TAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPA 236 (451)
Q Consensus 175 ~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e 236 (451)
..|+++|+++.++.+....+|..+++.+.+.+.+.. ||++.|++.+++.++..+..+++++
T Consensus 330 ~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 330 RVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWF-GYPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999998887 8999999988887775555555544
|
|
| >cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.4e-13 Score=127.96 Aligned_cols=160 Identities=29% Similarity=0.368 Sum_probs=142.3
Q ss_pred cccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchH-HHHHHHHHHHHHHHHHHHhh
Q 013044 67 DIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRR-ELILAALLYLVGALVTALAP 145 (451)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~-~~~~~~~l~~~~~~~~~~~~ 145 (451)
.........|...++ .++.++.+.++..+...++..++.++.+++.||+|||+ .+..+..+..++.++....+
T Consensus 190 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 263 (352)
T cd06174 190 GYYGLLTYLPLYLQE------VLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAP 263 (352)
T ss_pred HHHHHHHHHHHHHHH------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 333444455555443 04789999999999999999999999999999999999 99999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHH
Q 013044 146 DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAV 225 (451)
Q Consensus 146 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~ 225 (451)
+.+.+++..++.|++.+...+...+++.|..|+++|++.+++.+....+|..+++.+.+.+.+.. +|++.+++.+++.+
T Consensus 264 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~-~~~~~~~~~~~~~~ 342 (352)
T cd06174 264 SLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTG-GYGGVFLILAALAL 342 (352)
T ss_pred cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CcchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999877 99999999999988
Q ss_pred HHHHHhhc
Q 013044 226 IMGMGMWW 233 (451)
Q Consensus 226 ~~~~~~~~ 233 (451)
+..+..++
T Consensus 343 i~~i~~~~ 350 (352)
T cd06174 343 LAALLLLL 350 (352)
T ss_pred HHHHHhee
Confidence 86555544
|
MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3 |
| >TIGR00899 2A0120 sugar efflux transporter | Back alignment and domain information |
|---|
Probab=99.53 E-value=4.5e-13 Score=125.78 Aligned_cols=146 Identities=16% Similarity=0.162 Sum_probs=126.4
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 168 (451)
+|.++.+.+++.+.......++.++.|++.||+|||+++.++.++..++.++..+.++.+.+++.+++.|++.+...+..
T Consensus 230 ~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 309 (375)
T TIGR00899 230 LGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIG 309 (375)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68889999999888888888899999999999999999988887777766666677888888889999999999888888
Q ss_pred HHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhhcccC
Q 013044 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPA 236 (451)
Q Consensus 169 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e 236 (451)
..++.|..|+ +++++.++......+|..++|.+++.+.+.. ||+..|++.+++.++..+...+++|
T Consensus 310 ~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 375 (375)
T TIGR00899 310 MLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERW-SYHAVYWFAIVMLIVALFCLLLIKD 375 (375)
T ss_pred HHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cchhHHHHHHHHHHHHHHHHheecC
Confidence 8999998875 5679999999999999999999999999887 9999999999888776666665543
|
This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria. |
| >KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.53 E-value=2e-13 Score=128.12 Aligned_cols=296 Identities=17% Similarity=0.179 Sum_probs=193.1
Q ss_pred HHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH--HhhhhhhHHHHHHhccCCC
Q 013044 102 GSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIG--IGLAMHAAPMYIAETAPTP 179 (451)
Q Consensus 102 ~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~--~~~~~~~~~~~i~~~~~~~ 179 (451)
...+...+.++..|.++||+|||..+....+...+..+...+.. +|.++ +.|+. .+.....+.++++|....+
T Consensus 70 ~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~ 144 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEE 144 (463)
T ss_pred hhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HHHhh----hcccccchhhhhhhhhhheeeccchh
Confidence 33677788999999999999999999999999888888777755 44433 33332 3456788889999999999
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHH-HHHHhhcccCchHHHHHhhccccCCccchHHH
Q 013044 180 MRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI-MGMGMWWLPASPRWLLLCAMKRKGDMQDLRES 258 (451)
Q Consensus 180 ~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 258 (451)
+|....++....+..+..++|.+++.+.+.. |.-.+|++..+..++ .....+++||+-....+ .+
T Consensus 145 ~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~-~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~------~~------- 210 (463)
T KOG2816|consen 145 ERSSSIGLLSGTFGAGLVIGPALGGYLVKFL-GIALVFLIAAASGILSLLYMLLFLPESLQEKER------SD------- 210 (463)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHhhccccccCcccc------cc-------
Confidence 9999999999999999999999999998886 899999999888887 56667778887431000 00
Q ss_pred HHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhcccchhHHHHH-HHHH---HHHHhhchh-HHHHhHHH
Q 013044 259 AISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIG-AGLV---LFQQITGQP-SVLYYAAS 333 (451)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~-~~~~~~~~ 333 (451)
....+....... ........+...+ ...++..+. .... ......+.. ...+|.
T Consensus 211 -----~~~~~~~~~~~~--------------~~~~~~~~~~~~~-~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl-- 268 (463)
T KOG2816|consen 211 -----ATLRELTPGSLD--------------SSHVADAFQSLTK-VGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYL-- 268 (463)
T ss_pred -----ccccccCCCccc--------------chhhhhhhhhhcc-cCCCccchHHHHHHHHHHHHHhcCceeEEEEEE--
Confidence 000000000000 0000011111111 111121111 1111 111111111 111111
Q ss_pred HHHHcCCCCchhHHHHHHHHHHHHHHHHHHHH-HHhhhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHH
Q 013044 334 ILQSAGFSAASDATRVSILLGLFKLIMTGLAV-LVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLY 412 (451)
Q Consensus 334 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g-~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (451)
-...++ +..+.+.+.+...+...++.++.. .+...++.|+.+..|.....+.....++. ++.|.......+.
T Consensus 269 -~~~f~w-~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~-----~~~w~~~~~~v~~ 341 (463)
T KOG2816|consen 269 -KAKFGW-NKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFA-----TETWMMFAAGVVV 341 (463)
T ss_pred -eeecCc-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHh-----ccchhhhHHHHHH
Confidence 135678 888899888888888888888777 67778898888888888888887777663 5555554444333
Q ss_pred HHhhccccCCCceeeeeeecchhhhhhhhhhheeeee
Q 013044 413 VGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCAKL 449 (451)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (451)
.... ...|...+.......++.+|+..++.+.+
T Consensus 342 ~~~~----~~~pa~~s~~s~~v~~~e~g~v~~~is~i 374 (463)
T KOG2816|consen 342 ALAG----IVFPAIRAFASILVSPEEQGKVFGIISGI 374 (463)
T ss_pred Hhhc----chhHHHHhHHHhhcccccccchhhHHHHH
Confidence 3222 35777788888888999999888765543
|
|
| >PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.2e-13 Score=131.04 Aligned_cols=147 Identities=24% Similarity=0.231 Sum_probs=127.3
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 168 (451)
.|.++.+.+++.+.+.++..++.++.|+++||+|||+.+..+.+..+++.++..+.++.+.+.+..++.|++.++..+..
T Consensus 250 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 329 (406)
T PRK11551 250 QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVL 329 (406)
T ss_pred CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHH
Confidence 68889999999999999999999999999999999999988877777777777778888888888899999888888999
Q ss_pred HHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhhccc
Q 013044 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLP 235 (451)
Q Consensus 169 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~ 235 (451)
.+++.|.+|+++|++..++.+....+|..+||.+++.+.+...+|...+++.....++..+..+++.
T Consensus 330 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (406)
T PRK11551 330 YALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLLV 396 (406)
T ss_pred HHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999988754677777777666666555444443
|
|
| >PRK12382 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.4e-13 Score=127.37 Aligned_cols=136 Identities=19% Similarity=0.194 Sum_probs=122.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhc
Q 013044 96 IGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAET 175 (451)
Q Consensus 96 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 175 (451)
.++..+.+.++..+++++.|++.||+|+|+.+..+..+.+++.++..+.++.+.++++.++.|++.+...+...+.+.|.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 330 (392)
T PRK12382 251 AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKR 330 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 45667778888899999999999999999999999999999988888888888888999999999998888888899999
Q ss_pred cCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhh
Q 013044 176 APTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMW 232 (451)
Q Consensus 176 ~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~ 232 (451)
+|+++|+++.++.+....+|..++|.+.+.+.+.. ||++.|.+.+++.++..+..+
T Consensus 331 ~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~-g~~~~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 331 VPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSF-GYPSVFLAGAISAVLGIIVTI 386 (392)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999987 999999999888777444433
|
|
| >TIGR00902 2A0127 phenyl proprionate permease family protein | Back alignment and domain information |
|---|
Probab=99.50 E-value=5.8e-13 Score=125.13 Aligned_cols=139 Identities=13% Similarity=0.058 Sum_probs=126.5
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 168 (451)
+|.++.++|++.++..++..++.++.+++.||+|+|+.+.++.++.++..++.++++|.+.+++.+++.|++.+...+..
T Consensus 235 ~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~ 314 (382)
T TIGR00902 235 AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAA 314 (382)
T ss_pred CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCcchHHHHHH-HHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHH
Q 013044 169 PMYIAETAPTPMRGQLISLKE-FFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMG 230 (451)
Q Consensus 169 ~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~ 230 (451)
..++.+. |+++|++..++++ ...++|.++|+.++|++.+.. |+ ..|++.+.++++..+.
T Consensus 315 ~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~-g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 315 MRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTL-GA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cH-HHHHHHHHHHHHHHHH
Confidence 9999998 9899999999986 578899999999999999987 76 6677777766654433
|
This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules. |
| >PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon | Back alignment and domain information |
|---|
Probab=99.50 E-value=9.2e-12 Score=111.94 Aligned_cols=306 Identities=13% Similarity=0.063 Sum_probs=198.6
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhc-----chHHH-HHHHHHHHHHHHHHHHh-----h--------hH--
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILG-----RRREL-ILAALLYLVGALVTALA-----P--------DF-- 147 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G-----rr~~~-~~~~~l~~~~~~~~~~~-----~--------~~-- 147 (451)
++++....+.+.+..++... ..+.+|+.||+.+ ||..+ ..|..+...+..+..++ . .+
T Consensus 10 L~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g 88 (403)
T PF03209_consen 10 LGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLG 88 (403)
T ss_pred hccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHH
Confidence 78888889988888877755 6899999999998 77554 44666666665555442 2 21
Q ss_pred -HHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHH
Q 013044 148 -IIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (451)
Q Consensus 148 -~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~ 226 (451)
....++-.+.|+|.+...+...++++|..|+++|+++.++.....-+|.+++..+.+.+.+.+..-|..-.+.....+.
T Consensus 89 ~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i~ 168 (403)
T PF03209_consen 89 LALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVALIA 168 (403)
T ss_pred HHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHH
Confidence 2344556778999999999999999999999999999999999999999999999999888664445444444333222
Q ss_pred H--HHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhccc
Q 013044 227 M--GMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGK 304 (451)
Q Consensus 227 ~--~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (451)
. .++..+=.|.+..... ...++++..-...++++..++
T Consensus 169 ~~l~~ia~wg~E~r~~~~~----------------------------------------~~~~~~~~~f~~a~~~~~~~~ 208 (403)
T PF03209_consen 169 LLLNLIALWGQEPRRSRRA----------------------------------------AAAERPRPPFREAWRQVWASP 208 (403)
T ss_pred HHHHHHHHHhcccCCcccc----------------------------------------cCCCCCCccHHHHHHHHHhCC
Confidence 2 2222222222110000 000001112234566777777
Q ss_pred chhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhh-hcCCchhhhchhHH
Q 013044 305 CLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVE-RLGRRPLLLGGVSG 383 (451)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d-~~g~~~~~~~~~~~ 383 (451)
..++.+...++..+..+.-- ...=|+=-+-+|+ +..+...+....+.+.+++....+++.. |.++++...+++..
T Consensus 209 ~a~~f~~fl~l~t~a~~~QD---~iLEPygg~Vfgm-sv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~ 284 (403)
T PF03209_consen 209 QARRFFVFLFLGTLAFFMQD---VILEPYGGEVFGM-SVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLL 284 (403)
T ss_pred ChhHHHHHHHHHHHHHHhhH---HHcCCchhHHcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHH
Confidence 77777665555444321100 0111222345688 8999999999999999999999998765 67788888888888
Q ss_pred HHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhh
Q 013044 384 IVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSI 444 (451)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (451)
..+++.++..... ..+.+......++++.+.++ +..-.....-+...++..|+.+|
T Consensus 285 ~~~~f~lii~a~~--~~~~~~~~~~~~l~G~g~G~---f~vgals~mM~lt~~~~aG~~mG 340 (403)
T PF03209_consen 285 GALAFALIILAGP--LGSPWLFRPGVFLLGLGNGL---FTVGALSLMMDLTSAGRAGLFMG 340 (403)
T ss_pred HHHHHHHHHHHHh--cccchHHHHHHHHHHHhhhH---HHHHHHHHHHhCCCCcchhHHHH
Confidence 8887776654322 34567777777777777766 22222333444445555555544
|
It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase. |
| >TIGR00892 2A0113 monocarboxylate transporter 1 | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.5e-13 Score=131.87 Aligned_cols=141 Identities=18% Similarity=0.194 Sum_probs=120.0
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhh--cchHHHHH--HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADIL--GRRRELIL--AALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLA 164 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~--Grr~~~~~--~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 164 (451)
++.+..+.+++.++..++..+++++.|+++||. ++|+...+ +.++.+++.++....++++.+++.+++.|++.+..
T Consensus 271 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~ 350 (455)
T TIGR00892 271 KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSV 350 (455)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchH
Confidence 688999999999999999999999999999973 34443333 44444555666677889999999999999999999
Q ss_pred hhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHH
Q 013044 165 MHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGM 229 (451)
Q Consensus 165 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~ 229 (451)
.+...+++.|.+|++++++..++.+....+|.++||.+++.+.+...+|++.|++.+++.++..+
T Consensus 351 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 351 GALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 99999999999999999999999999999999999999999998764699999998887666433
|
|
| >COG2270 Permeases of the major facilitator superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.2e-12 Score=114.53 Aligned_cols=304 Identities=13% Similarity=0.048 Sum_probs=196.8
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHH-HHHHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHHHhhhhhh
Q 013044 92 SSVEIGLITSGSLYGALIGSILAFNIADILGRRREL-ILAALLYLVGALVTALAPD---FIIMVVGRFVFGIGIGLAMHA 167 (451)
Q Consensus 92 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~-~~~~~l~~~~~~~~~~~~~---~~~l~~~r~l~G~~~~~~~~~ 167 (451)
+.+..|...++..+..++.+++.|.++|+.|+||.. -+...+..++..+..+.++ ++..++.-.+..++.......
T Consensus 56 ~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vf 135 (438)
T COG2270 56 STAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVF 135 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhhee
Confidence 457788999999999999999999999999976654 4455555556666666554 455566678889999999999
Q ss_pred HHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhh--hc----------------ccccchhHHHhhhHHHHHHH-H
Q 013044 168 APMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSL--LV----------------DLVAGWRYMYGASTPLAVIM-G 228 (451)
Q Consensus 168 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~--l~----------------~~~~~wr~~f~~~~~~~~~~-~ 228 (451)
-.+++.+..++++-++..++-.....+|..+.-+.... .. +.. .-|..+.+.++..++. +
T Consensus 136 yds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~-~~ri~~~l~A~W~li~~i 214 (438)
T COG2270 136 YDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGE-DVRITGLLAALWWLLFAL 214 (438)
T ss_pred hhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccc-cchhHHHHHHHHHHHHHh
Confidence 99999999998887777766555555555544444211 11 122 5788888888877774 4
Q ss_pred HHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhcccchhH
Q 013044 229 MGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKA 308 (451)
Q Consensus 229 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (451)
..++.+++.++-. +. ......+.. ++-+.+.+++.+++....
T Consensus 215 Pm~~~v~~~~~~~---------~~--~~~~l~~g~---------------------------k~L~~t~k~i~~~~~i~~ 256 (438)
T COG2270 215 PMILNVHDAEKIS---------SP--PPTALRNGF---------------------------KELKSTFKEIRGRKNLVL 256 (438)
T ss_pred HHHhccccccccc---------cc--chHHHHHHH---------------------------HHHHHHHHHHhcccchHH
Confidence 4444555544200 00 000000000 011223444444332222
Q ss_pred HHHHHHHHHHHHhhchhHHHHhHHHHHH-HcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHH
Q 013044 309 LIIGAGLVLFQQITGQPSVLYYAASILQ-SAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVIS 387 (451)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 387 (451)
+.+..+...-+.+.+......+-. ++|+ +..+...+.....+..++|+++.|++.||+|.|+++..+.++..+.
T Consensus 257 ----FLiA~~~~~DGv~til~~~~~fg~~~~gl-s~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~ 331 (438)
T COG2270 257 ----FLIARFFYIDGVNTILAMGGVFGAADLGL-SSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIA 331 (438)
T ss_pred ----HHHHHHHHHhhHHHHHHHHHHHHHHHcCc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHH
Confidence 223333333445566666666655 7899 8999999999999999999999999999999999888877776665
Q ss_pred HHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheee
Q 013044 388 LFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCA 447 (451)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (451)
.+...+. .......+...+.+.+.+. .....-.+..+.+|+++.+...|+.+
T Consensus 332 ~~~~~~~-----~~~~~f~i~gll~g~s~G~---~qA~SRSy~~~lvp~~k~~~fFglya 383 (438)
T COG2270 332 ALYLIFL-----EGELDFWILGLLVGTSLGG---AQASSRSYLARLVPKGKEGRFFGLYA 383 (438)
T ss_pred HHHHHHc-----cccHHHHHHHHHHHHhcch---HHHHHHHHHHHhCCCccccceeehhh
Confidence 5443321 2233333333444555553 56677788899999998888777643
|
|
| >PRK09874 drug efflux system protein MdtG; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.7e-13 Score=128.80 Aligned_cols=137 Identities=18% Similarity=0.283 Sum_probs=122.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHh
Q 013044 95 EIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAE 174 (451)
Q Consensus 95 ~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 174 (451)
..+.+.+++.++..++.++.|+++||+|||+.+..+..+..++.+...+.++.+.+++.+++.|++.+...+...+++.+
T Consensus 259 ~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 338 (408)
T PRK09874 259 ISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVY 338 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHH
Confidence 35667777888889999999999999999999999999888888888888889999999999999999999999999999
Q ss_pred ccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhh
Q 013044 175 TAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMW 232 (451)
Q Consensus 175 ~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~ 232 (451)
..++++||+.+++......+|..+||.+++.+.+.. +|++.|++.+++.++..+..+
T Consensus 339 ~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~-g~~~~f~~~~~~~l~~~~~~~ 395 (408)
T PRK09874 339 NSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANY-GFRAVFLVTAGVVLFNAVYSW 395 (408)
T ss_pred hCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhc-chhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999887 999999999988887544443
|
|
| >PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
Probab=99.46 E-value=3e-11 Score=106.95 Aligned_cols=233 Identities=13% Similarity=0.160 Sum_probs=154.1
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 168 (451)
+|.++.|++.+....+...++...+.|.++||+|||+.-++..++.+++++. -..++++.++++|++.|++....+.+-
T Consensus 64 yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~-k~~~~~~~L~~GRvlgGiaTSLLfS~F 142 (354)
T PF05631_consen 64 YGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLT-KHSSNYPVLLLGRVLGGIATSLLFSAF 142 (354)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH-HhccccHHHHHHHHHHHHHHHHHHHHH
Confidence 7999999999999999999999999999999999999999999999998864 456899999999999999999998888
Q ss_pred HHHH-HhccCCCCcchHHHH----HH-HHHHHHHHHHHHHhhhhcccc-cchhHHHhhhHHHHHHHHHHhh-cccCchHH
Q 013044 169 PMYI-AETAPTPMRGQLISL----KE-FFIVLGMVGGYGIGSLLVDLV-AGWRYMYGASTPLAVIMGMGMW-WLPASPRW 240 (451)
Q Consensus 169 ~~~i-~~~~~~~~r~~~~~~----~~-~~~~~G~~~g~~l~~~l~~~~-~~wr~~f~~~~~~~~~~~~~~~-~~~e~~~~ 240 (451)
.+++ .|+-..+.+...++- .. ...++-.+++.+++.++.+.. .|-..+|....++.++..+... .-+|....
T Consensus 143 EsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~ 222 (354)
T PF05631_consen 143 ESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGD 222 (354)
T ss_pred HHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCC
Confidence 8775 555322222222222 22 122233444455555555543 1347888888777776444333 23443210
Q ss_pred HHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhcccchhHHHHHHHHHHHHH
Q 013044 241 LLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQ 320 (451)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (451)
..+ ..+. .+.-+..++.+.++ ++++........+.
T Consensus 223 --------~~~------------------------~~~~----------~~~~~~a~~~i~~d---~ril~LG~~qslFE 257 (354)
T PF05631_consen 223 --------TSS------------------------SSSL----------SGSFREAWRAILSD---PRILLLGLIQSLFE 257 (354)
T ss_pred --------ccc------------------------ccch----------HHHHHHHHHHHHcC---chhHHHHHHHHHHH
Confidence 000 0000 00011123445544 45555566666666
Q ss_pred hhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 013044 321 ITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVER 370 (451)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~ 370 (451)
...+..+..|.|.+- +......-|++...+.++.++|+.+..++..+
T Consensus 258 ~smy~FVflWtPaL~---~~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 258 GSMYLFVFLWTPALD---PDDEELPLGLIFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred HHHHHheeeeeceec---CCCCCCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 666677777888764 21134568899999999999999998766544
|
|
| >PRK03633 putative MFS family transporter protein; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=2e-12 Score=121.55 Aligned_cols=141 Identities=13% Similarity=0.126 Sum_probs=119.4
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 168 (451)
.|.+..+.+++.+...++..+++++.|++.||+|+|+++..+.++.+++.+... + ...+..+.++.|++.+...|..
T Consensus 230 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g~~~~~~~p~~ 306 (381)
T PRK03633 230 QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFILGAAGFTLYPVA 306 (381)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHHHHHHHhHHHHH
Confidence 578888999999999999999999999999999999999988888877765543 2 2344567788888888889999
Q ss_pred HHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhhc
Q 013044 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW 233 (451)
Q Consensus 169 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~ 233 (451)
.+.+.|..|+++++...+.....+++|.++||.++|++.++. +|++.|.+.+.+.++..+..++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~-g~~~~f~~~~~~~l~~~~~~~~ 370 (381)
T PRK03633 307 MAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNY-SDNLLFIMIASVSFIYLLMLLR 370 (381)
T ss_pred HHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CccHHHHHHHHHHHHHHHHHHh
Confidence 999999999888888888888899999999999999999987 8999999988887765544443
|
|
| >TIGR00891 2A0112 putative sialic acid transporter | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.2e-12 Score=124.20 Aligned_cols=131 Identities=21% Similarity=0.206 Sum_probs=111.6
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHH-HHHHhhhHHHHHHHHHHHHHHHhhhhhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGAL-VTALAPDFIIMVVGRFVFGIGIGLAMHA 167 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~-~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 167 (451)
+|.+..+.+++.+...++..++.++.|+++||+|||+.+.++.++.++..+ +....++.+.+.++.++.|+..+...+.
T Consensus 269 ~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (405)
T TIGR00891 269 LGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGI 348 (405)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhh
Confidence 688999999999999999999999999999999999999888776643333 3334566777777778888887778888
Q ss_pred HHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhh
Q 013044 168 APMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGA 219 (451)
Q Consensus 168 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~ 219 (451)
...++.|.+|+++|++++|+.+....+|..++|++.+.+.+..+.|+..+..
T Consensus 349 ~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 349 LPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 8899999999999999999999999999999999999999987238776654
|
|
| >PRK03699 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.7e-12 Score=121.19 Aligned_cols=146 Identities=14% Similarity=0.056 Sum_probs=125.7
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 168 (451)
+|.+..+.+++.+.+.++..++.++.|+++||+|||+.+.....+..+...+....++.+.+.+..++.|++.+...+..
T Consensus 236 ~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~ 315 (394)
T PRK03699 236 FGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTI 315 (394)
T ss_pred cCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHH
Confidence 68899999999999999999999999999999999999998888877777777777888777788889999888888888
Q ss_pred HHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhhcccC
Q 013044 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPA 236 (451)
Q Consensus 169 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e 236 (451)
.++..|..+ +++++..+.......+|..++|.+.+.+.+.. ||+..+++.+++.++..+....+++
T Consensus 316 ~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (394)
T PRK03699 316 ITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHF-GLQAALLTANGLYAVVFVMCILLGF 381 (394)
T ss_pred HHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHh-CchhhhhhhHHHHHHHHHHHHHHHH
Confidence 888888776 55678888988899999999999999999987 9999999888887776555555443
|
|
| >TIGR00893 2A0114 d-galactonate transporter | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.8e-12 Score=122.60 Aligned_cols=141 Identities=22% Similarity=0.164 Sum_probs=106.9
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchH--HHH------HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRR--ELI------LAALLYLVGALVTALAPDFIIMVVGRFVFGIG 160 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~--~~~------~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~ 160 (451)
++.++.+.+++.+...++..++.++.|+++||+|||+ ... .+.++..+........++.+..+....+.+.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (399)
T TIGR00893 246 RGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFG 325 (399)
T ss_pred hcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhc
Confidence 6888899999999999999999999999999999996 111 11111111111112223444444444455555
Q ss_pred HhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccc-hhHHHhhhHHHHHHHHHHh
Q 013044 161 IGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAG-WRYMYGASTPLAVIMGMGM 231 (451)
Q Consensus 161 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~-wr~~f~~~~~~~~~~~~~~ 231 (451)
.+ ..+...+++.|.+|+++|+++.++.+....+|..++|.+.+.+.+.. + |++.|++.++..++..+..
T Consensus 326 ~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~-g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 326 LG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATT-GSFAGALMVVAALALIGALSY 395 (399)
T ss_pred hh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCC-CchhHHHHHHHHHHHHHHHHH
Confidence 44 78999999999999999999999999999999999999999999987 6 9999998888777644433
|
|
| >PRK10489 enterobactin exporter EntS; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.5e-12 Score=123.99 Aligned_cols=149 Identities=18% Similarity=0.131 Sum_probs=131.0
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 168 (451)
+|.++.+.|++.+...++..++.++.+++.||.++++.+..+.++.+++.++..+.++.+...++.++.|++.+...+..
T Consensus 254 ~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 333 (417)
T PRK10489 254 WQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQ 333 (417)
T ss_pred cCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 57888999999999999999999999999999888888888888888888888888888888889999999998888888
Q ss_pred HHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHH-HHHHhhcccCch
Q 013044 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI-MGMGMWWLPASP 238 (451)
Q Consensus 169 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~-~~~~~~~~~e~~ 238 (451)
.+++.|..|+++||+++++......+|..+|+.+.+.+.+.. |++..+++.+...++ ..+....+++.+
T Consensus 334 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (417)
T PRK10489 334 YTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMM-TPVASASASGFGLLIIGVLLLLVLGELR 403 (417)
T ss_pred HHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHh-chhhHHHHHHHHHHHHHHHHHHhccccc
Confidence 899999999999999999999999999999999999999987 888888877776666 455555566543
|
|
| >PRK09556 uhpT sugar phosphate antiporter; Reviewed | Back alignment and domain information |
|---|
Probab=99.42 E-value=3e-12 Score=123.63 Aligned_cols=144 Identities=20% Similarity=0.107 Sum_probs=112.4
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHH--HHHhhhHHHHHHHHHHHHHHHhhhhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALV--TALAPDFIIMVVGRFVFGIGIGLAMH 166 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~--~~~~~~~~~l~~~r~l~G~~~~~~~~ 166 (451)
+|.+..+.++..+...++..++.+++|+++||+|||+.+.....+..++..+ ....++.+.+.+++++.|++......
T Consensus 289 ~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 368 (467)
T PRK09556 289 LGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQL 368 (467)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHH
Confidence 7899999999999999999999999999999999998877655444443322 22345666777888888875444443
Q ss_pred hHHHHHHhccCCCCcchHHHHHHHHHHH-HHHHHHHHhhhhcc------------cccchhHHHhhhHHHHHHHHHHhhc
Q 013044 167 AAPMYIAETAPTPMRGQLISLKEFFIVL-GMVGGYGIGSLLVD------------LVAGWRYMYGASTPLAVIMGMGMWW 233 (451)
Q Consensus 167 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~~g~~l~~~l~~------------~~~~wr~~f~~~~~~~~~~~~~~~~ 233 (451)
.......|.+|+++||.+.|+.+....+ |.+++|.+.|.+.+ .. +|+..|++..+..++..+..++
T Consensus 369 ~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~-~~~~~f~~~~~~~~~~~~~~~~ 447 (467)
T PRK09556 369 LIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLT-GWAGTFAALDIAAIGCICLMAI 447 (467)
T ss_pred HHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccccccccccccc-ChHHHHHHHHHHHHHHHHHHHH
Confidence 3446677999999999999999988886 77999999999988 44 7999999887777765444443
|
|
| >TIGR00883 2A0106 metabolite-proton symporter | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.6e-12 Score=122.76 Aligned_cols=137 Identities=23% Similarity=0.158 Sum_probs=112.0
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHH--HHHHH--hhhHHHHHHHHHHHHHHHhhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGA--LVTAL--APDFIIMVVGRFVFGIGIGLA 164 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~--~~~~~--~~~~~~l~~~r~l~G~~~~~~ 164 (451)
++.++.+.++..+...++..++.++.|+++||+|||+.+..+..+..+.. ++..+ .++.+.+++..++.|++.+..
T Consensus 250 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 329 (394)
T TIGR00883 250 LGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMY 329 (394)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHH
Confidence 68888999999999999999999999999999999998876555444333 22222 246777778889999999999
Q ss_pred hhhHHHHHHhccCCCCcchHHHH-HHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHH
Q 013044 165 MHAAPMYIAETAPTPMRGQLISL-KEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAV 225 (451)
Q Consensus 165 ~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~ 225 (451)
.+...+++.|.+|+++|+++.++ ......+|..++|.+++.+.+..++|++.++......+
T Consensus 330 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 330 TGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred hhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 99999999999999999999998 45667789999999999999887339888777665544
|
This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc. |
| >PRK03545 putative arabinose transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.2e-12 Score=119.79 Aligned_cols=140 Identities=21% Similarity=0.096 Sum_probs=117.3
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHH-HHHHHhhhHHHHHHHHHHHHHHHhhhhhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGA-LVTALAPDFIIMVVGRFVFGIGIGLAMHA 167 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 167 (451)
+|.+..+.+++.+...++..++.++.|+++||+|||++.. +..+..++. ++....++.+.++++.++.|++.+...+.
T Consensus 236 ~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~ 314 (390)
T PRK03545 236 AGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLA 314 (390)
T ss_pred cCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHH
Confidence 6888899999999999999999999999999999887544 444444443 33455678888888999999998877787
Q ss_pred HHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHh
Q 013044 168 APMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGM 231 (451)
Q Consensus 168 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~ 231 (451)
..+.+.|..| ++|++++++......+|..+||+++|.+.+.. |+|..|++.+++.++..+..
T Consensus 315 ~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~-g~~~~~~~~~~~~~~~~~~~ 376 (390)
T PRK03545 315 MQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHL-GLSSIGYVGAALALAALVWS 376 (390)
T ss_pred HHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHHHHHH
Confidence 8888888876 68899999999999999999999999999998 99999999998887744433
|
|
| >PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX) | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.6e-11 Score=108.77 Aligned_cols=312 Identities=17% Similarity=0.155 Sum_probs=197.9
Q ss_pred ccCCchhHH-HHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhh
Q 013044 89 YDLSSVEIG-LITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHA 167 (451)
Q Consensus 89 ~~~s~~~~g-~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 167 (451)
.|++..|+. -+.-...-.+....++...++|..|.|++++++.+...+..++..+.++...+-+..++.|++.+ ...+
T Consensus 35 kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a-~eva 113 (412)
T PF01770_consen 35 KNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATA-AEVA 113 (412)
T ss_pred cCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHH-HHHH
Confidence 577877764 56666777788899999999999999999999999999999999999999999999999999988 5788
Q ss_pred HHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhccc-ccchhHHHhhhHHHHHHHHHHhhcccCchHHHHHhhc
Q 013044 168 APMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL-VAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAM 246 (451)
Q Consensus 168 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~-~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 246 (451)
-.+++-...|+++-.++.+...++.-+|..++.++|-.+... ..+++...++......+.++..+++|..++...-+++
T Consensus 114 y~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~~~S~~f~r~ 193 (412)
T PF01770_consen 114 YYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMPKRSLFFHRK 193 (412)
T ss_pred HHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCCCcccceecc
Confidence 888998899999999999999999999999999999988762 2266777777776666666777778876653322221
Q ss_pred cccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhc---ccchhHHHHHHHHHHHHHhhc
Q 013044 247 KRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFH---GKCLKALIIGAGLVLFQQITG 323 (451)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 323 (451)
....+... +.+....++..+.. .+..+..+......+...+.+.+ +-...+.++...+++.....+
T Consensus 194 ~~~~~~~~----------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcg 262 (412)
T PF01770_consen 194 PPAEQDAN----------ESESDKMNESPESS-SSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCG 262 (412)
T ss_pred Cccccccc----------cccccccccccccc-cccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhH
Confidence 11000000 00000000000000 00000000000000111111111 112233444455566666677
Q ss_pred hhHHHHhHHHHHHHc---CCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHH--HHHHHHHHHhhhcc
Q 013044 324 QPSVLYYAASILQSA---GFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGI--VISLFLLGSYYLFL 398 (451)
Q Consensus 324 ~~~~~~~~~~~~~~~---~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~ 398 (451)
+..+.+|...+.++. +. ...-.|..-....+.+.++.+..|++-.+..+...+.++.... +.+++++..
T Consensus 263 y~qv~nYvQ~LW~~v~~~~~-~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~----- 336 (412)
T PF01770_consen 263 YYQVINYVQSLWDTVPPSDN-ESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSF----- 336 (412)
T ss_pred HHHHHHHHHHHHHhcCCCCC-CcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 777888888888776 22 3445666777777778888888888855555433333322222 222333222
Q ss_pred CCcchHHHHHHHHHHHhhcc
Q 013044 399 DDVPAVAVVALLLYVGCYQV 418 (451)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~ 418 (451)
.++.|...+..+++...+.+
T Consensus 337 t~~Iwv~Y~~yIif~~~y~f 356 (412)
T PF01770_consen 337 TGNIWVCYAGYIIFRSLYMF 356 (412)
T ss_pred hhHHHHHHHHHHHHHHHHHH
Confidence 46677777777777777766
|
Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane |
| >PRK03893 putative sialic acid transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.3e-12 Score=125.72 Aligned_cols=137 Identities=13% Similarity=0.049 Sum_probs=111.9
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHhhhhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA--PDFIIMVVGRFVFGIGIGLAMH 166 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~ 166 (451)
+|.+..+.+++.+...++..++.++.|+++||+|||+++.++.++..++.++.... .+.+.+.+..++.+.......+
T Consensus 306 ~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (496)
T PRK03893 306 LGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISG 385 (496)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccch
Confidence 78999999999999999999999999999999999999998887777666544433 3344455555555554444567
Q ss_pred hHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHH
Q 013044 167 AAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (451)
Q Consensus 167 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~ 226 (451)
...+++.|.+|+++|++.+++......+|..+||++++.+.+.. ||+..+.+.+....+
T Consensus 386 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~-g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 386 LLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRL-DLGTALASLSFSLTF 444 (496)
T ss_pred hhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccC-ChHHHHHHHHHHHHH
Confidence 77888999999999999999999999999999999999999987 899888765554433
|
|
| >TIGR00879 SP MFS transporter, sugar porter (SP) family | Back alignment and domain information |
|---|
Probab=99.39 E-value=4.1e-12 Score=123.36 Aligned_cols=159 Identities=14% Similarity=0.012 Sum_probs=122.6
Q ss_pred ccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHh-----h-
Q 013044 72 SCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA-----P- 145 (451)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~-----~- 145 (451)
....|.+.++ +|.+..+.++......++..++.++.|+++||+|||+.+.++.++.+++.++.++. +
T Consensus 304 ~~~~~~~~~~-------~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (481)
T TIGR00879 304 MYYSPTIFEN-------AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTG 376 (481)
T ss_pred HHHHHHHHHH-------cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCC
Confidence 3344555555 68888888999999999999999999999999999999999988888887777621 1
Q ss_pred -----hHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhh
Q 013044 146 -----DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGAS 220 (451)
Q Consensus 146 -----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~ 220 (451)
+...+....++.+.......+....++.|.+|+++|++++++......+|.++++.+.+.+.+.. +|++.|++.
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~-~~~~~f~~~ 455 (481)
T TIGR00879 377 SSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESI-GVGGVFIFF 455 (481)
T ss_pred cccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CccceehhH
Confidence 23333333333333333345667778899999999999999999999999999999999998876 899999999
Q ss_pred HHHHHHHHHH-hhcccCch
Q 013044 221 TPLAVIMGMG-MWWLPASP 238 (451)
Q Consensus 221 ~~~~~~~~~~-~~~~~e~~ 238 (451)
++++++..+. .++.||++
T Consensus 456 ~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 456 GGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred HHHHHHHHHHHheecccCC
Confidence 8888774444 44556643
|
This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083) |
| >PRK09705 cynX putative cyanate transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.2e-11 Score=116.54 Aligned_cols=149 Identities=19% Similarity=0.196 Sum_probs=119.8
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHhhhhhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP-DFIIMVVGRFVFGIGIGLAMHA 167 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~~~ 167 (451)
+|.+..+.|+..+.+.++..++.++.|++.||+|||+.+..+..+..++.++....+ +...+. -++.|++.+...+.
T Consensus 235 ~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~l~g~g~g~~~~~ 312 (393)
T PRK09705 235 IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVLW--AMVCGLGLGGAFPL 312 (393)
T ss_pred cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHHH--HHHHHHhccchHHH
Confidence 688999999999999999999999999999999999999998888877776655333 222222 34678888888888
Q ss_pred HHHHHHhccC-CCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHH-HHHHhhcccCchH
Q 013044 168 APMYIAETAP-TPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI-MGMGMWWLPASPR 239 (451)
Q Consensus 168 ~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~-~~~~~~~~~e~~~ 239 (451)
......+..+ +++|++..++.+....++..++|.+.+++.+..++|+..|++..+.+++ ......+.||++.
T Consensus 313 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (393)
T PRK09705 313 CLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARFP 386 (393)
T ss_pred HHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 8777777775 5679999999999999999999999999999875688888888877776 3444555676643
|
|
| >PRK11128 putative 3-phenylpropionic acid transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.2e-11 Score=116.16 Aligned_cols=135 Identities=16% Similarity=0.067 Sum_probs=118.3
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 168 (451)
.|.+..+.|.+.+...++..+..++.|++.||+|+|+.+..+.++.+++.++.+..++.+.+++..++.|++.+...+..
T Consensus 235 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 314 (382)
T PRK11128 235 AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAA 314 (382)
T ss_pred CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 68899999999999999999999999999999999999999999999988888889999999999999999999999999
Q ss_pred HHHHHhccCCCCcchHHHHHH-HHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHH
Q 013044 169 PMYIAETAPTPMRGQLISLKE-FFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (451)
Q Consensus 169 ~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~ 226 (451)
..++.+. +++++++..++.. ....+|..+||.++|.+.+.. ++ ..|+..+++.++
T Consensus 315 ~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~-g~-~~~~~~~~~~~~ 370 (382)
T PRK11128 315 MRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHL-GA-GVFWVMALVALP 370 (382)
T ss_pred HHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cH-HHHHHHHHHHHH
Confidence 9998887 5566788888875 567788899999999999987 76 466666665554
|
|
| >PRK09952 shikimate transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=9.1e-12 Score=119.11 Aligned_cols=149 Identities=17% Similarity=0.038 Sum_probs=113.4
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHH---h-hhHHHHHHHHHHHHHHHhhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL---A-PDFIIMVVGRFVFGIGIGLA 164 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~---~-~~~~~l~~~r~l~G~~~~~~ 164 (451)
+|.+......+.....+...++.++.|+++||+|||+++..+.++..++.+.... . ++.+.+++..++.|++.+..
T Consensus 281 ~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 360 (438)
T PRK09952 281 LGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMV 360 (438)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHH
Confidence 6777776666666667777888999999999999999998887766655443332 2 23455555667778888888
Q ss_pred hhhHHHHHHhccCCCCcchHHHHHH-HHHHHHHHHHHHHhhhhcccc-cchhHHHhhhHHHHHHHHHHhhcccCc
Q 013044 165 MHAAPMYIAETAPTPMRGQLISLKE-FFIVLGMVGGYGIGSLLVDLV-AGWRYMYGASTPLAVIMGMGMWWLPAS 237 (451)
Q Consensus 165 ~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~l~~~l~~~~-~~wr~~f~~~~~~~~~~~~~~~~~~e~ 237 (451)
.+...+++.|.+|.+.|+...++.. .+..+|..++|.+.+++.+.. ++|+..+.+.++..++..+..+.++|+
T Consensus 361 ~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~ 435 (438)
T PRK09952 361 VCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMKDN 435 (438)
T ss_pred HHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHcccc
Confidence 8888999999999999998888854 445689999999999998743 258888888877777766666666664
|
|
| >TIGR00897 2A0118 polyol permease family | Back alignment and domain information |
|---|
Probab=99.37 E-value=1e-11 Score=117.57 Aligned_cols=151 Identities=13% Similarity=0.068 Sum_probs=117.4
Q ss_pred ccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHH-HHHHHHHHHHHHHHH-----hhhH
Q 013044 74 ATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELI-LAALLYLVGALVTAL-----APDF 147 (451)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~-~~~~l~~~~~~~~~~-----~~~~ 147 (451)
..|...++ +|.+..+.+++.+...++..++.++.|+++||+|||+.+. .+.+..+++.+...+ .++.
T Consensus 244 ~~p~~~~~-------~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~ 316 (402)
T TIGR00897 244 FLPMFVAE-------LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSF 316 (402)
T ss_pred HHHHHHHH-------cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcH
Confidence 35555555 6888899999999999999999999999999999988764 333333443333332 2467
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHH
Q 013044 148 IIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIM 227 (451)
Q Consensus 148 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~ 227 (451)
+.+++..++.|++.+...+. ...+.|.. +++|+++.|+.+....+|..++|.+++.+.+.. ||+..|++.+++.++.
T Consensus 317 ~~~~~~~~~~G~~~~~~~~~-~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~-g~~~~~~~~a~~~~i~ 393 (402)
T TIGR00897 317 AVALIIAIALGIFLAGYVPL-AAVFPTLA-PKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFF-GAIGVVWIFAALYVVS 393 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHhhC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHHHHHHHHHHHHHH
Confidence 77788899999988876554 45667764 468999999999999999999999999999987 9999999998887775
Q ss_pred HHHhhcc
Q 013044 228 GMGMWWL 234 (451)
Q Consensus 228 ~~~~~~~ 234 (451)
.+...++
T Consensus 394 ~~~~~~~ 400 (402)
T TIGR00897 394 AFLTAFI 400 (402)
T ss_pred HHHHHHh
Confidence 5554443
|
This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis. |
| >TIGR00882 2A0105 oligosaccharide:H+ symporter | Back alignment and domain information |
|---|
Probab=99.36 E-value=8.6e-12 Score=117.93 Aligned_cols=138 Identities=13% Similarity=0.165 Sum_probs=121.5
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHH
Q 013044 90 DLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAP 169 (451)
Q Consensus 90 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 169 (451)
+.+....|.+.++..+...++.+..|++.||+|||+.+.++.++.+++..+....+|.+.+++.+++.|++.........
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 329 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCF 329 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667789999999999999999999999999999999999999999888888889999999999999999887777777
Q ss_pred HHHHhccCCCCcchHHHH-HHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHH
Q 013044 170 MYIAETAPTPMRGQLISL-KEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMG 228 (451)
Q Consensus 170 ~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~ 228 (451)
.++.+..+++.++...+. .+....+|..++++++|++.+.. ||+..|.+.+++.++..
T Consensus 330 ~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~-G~~~~f~~~~~~~~i~~ 388 (396)
T TIGR00882 330 KYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSI-GFQGAYLVLGCIVLLFT 388 (396)
T ss_pred HHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhc-ccHHHHHHHHHHHHHHH
Confidence 788888888888887766 67889999999999999999987 99999999888877743
|
|
| >PRK10077 xylE D-xylose transporter XylE; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=3.3e-11 Score=117.13 Aligned_cols=157 Identities=15% Similarity=0.062 Sum_probs=116.5
Q ss_pred ccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhh--hH-H-H
Q 013044 74 ATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP--DF-I-I 149 (451)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~--~~-~-~ 149 (451)
..|.+.++ +|.+....++......+...++.++.|+++||+|||++++.+.++.+++.++.+... +. + .
T Consensus 293 ~~p~i~~~-------~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~ 365 (479)
T PRK10077 293 YAPEIFKT-------LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIV 365 (479)
T ss_pred HHHHHHHH-------cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHH
Confidence 34655555 677777777777788888999999999999999999999999999998887776432 21 1 2
Q ss_pred HHHHHHHHHHHHhh-hhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhh------cccccchhHHHhhhHH
Q 013044 150 MVVGRFVFGIGIGL-AMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLL------VDLVAGWRYMYGASTP 222 (451)
Q Consensus 150 l~~~r~l~G~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l------~~~~~~wr~~f~~~~~ 222 (451)
.+.+-++.+++.+. ..+...+++.|.+|+++|++++++......+|.++++.+...+ .+.. +|++.|++.++
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~ 444 (479)
T PRK10077 366 ALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHF-HNGFSYWIYGC 444 (479)
T ss_pred HHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhc-cCccHHHHHHH
Confidence 33344455555443 3467789999999999999999999999999998886655443 3455 88999998888
Q ss_pred HHHHHHH-HhhcccCch
Q 013044 223 LAVIMGM-GMWWLPASP 238 (451)
Q Consensus 223 ~~~~~~~-~~~~~~e~~ 238 (451)
++++..+ .+++.||++
T Consensus 445 ~~~~~~~~~~~~~~e~~ 461 (479)
T PRK10077 445 MGVLAALFMWKFVPETK 461 (479)
T ss_pred HHHHHHHHHHhccccCC
Confidence 7777444 444566653
|
|
| >TIGR00895 2A0115 benzoate transport | Back alignment and domain information |
|---|
Probab=99.32 E-value=7.7e-12 Score=118.36 Aligned_cols=118 Identities=20% Similarity=0.112 Sum_probs=101.3
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 168 (451)
++.++.+.++..+...++..++.++.|+++||+|||+.+....+......++....++.+.+++..++.|++.+...+..
T Consensus 280 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 359 (398)
T TIGR00895 280 LGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGL 359 (398)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHH
Confidence 68888999999999999999999999999999999955544444444333333335677888888999999999999999
Q ss_pred HHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhh
Q 013044 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLL 206 (451)
Q Consensus 169 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l 206 (451)
.+++.|.+|+++|+++.|+......+|..+||.++|.+
T Consensus 360 ~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 360 YALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 99999999999999999999999999999999999875
|
|
| >PRK11010 ampG muropeptide transporter; Validated | Back alignment and domain information |
|---|
Probab=99.31 E-value=3.6e-10 Score=109.46 Aligned_cols=147 Identities=16% Similarity=0.166 Sum_probs=118.1
Q ss_pred ccCCchhHHHHHH-HHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHH---HHh-hhHHHHHHHHHHHHHHHhh
Q 013044 89 YDLSSVEIGLITS-GSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVT---ALA-PDFIIMVVGRFVFGIGIGL 163 (451)
Q Consensus 89 ~~~s~~~~g~~~s-~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~---~~~-~~~~~l~~~r~l~G~~~~~ 163 (451)
+|.+..+.+++.. ...++..++.+++|+++||+|+|+.+.++.++.+++.++. +.. ++.+.+.+.-++..++.|.
T Consensus 253 ~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~ 332 (491)
T PRK11010 253 VGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGM 332 (491)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH
Confidence 6899999999974 6678999999999999999999998877766655544332 232 4555556666776666666
Q ss_pred hhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhhcccC
Q 013044 164 AMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPA 236 (451)
Q Consensus 164 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e 236 (451)
..+...++..+..+++.+++..++.++..++|..+++.+.|.+.+.. ||+..|.+.++++++..+...++++
T Consensus 333 ~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~-G~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 333 GTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAH-GWPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 66777888999999999999999999999999999999999999987 9999999988888886665555544
|
|
| >PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.6e-11 Score=116.56 Aligned_cols=143 Identities=17% Similarity=0.157 Sum_probs=102.2
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhh--cchHHH-HHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHHHhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADIL--GRRREL-ILAALLYLVGALVTAL--APDFIIMVVGRFVFGIGIGL 163 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~--Grr~~~-~~~~~l~~~~~~~~~~--~~~~~~l~~~r~l~G~~~~~ 163 (451)
+|.+..+.++....+.++..++.++.|+++||+ |||+.. +....+..++.++..+ .++.+..+++.++.|.+...
T Consensus 284 ~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 363 (452)
T PRK11273 284 KHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYG 363 (452)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHh
Confidence 578888999999999999999999999999999 555432 2223333333333222 23455555555556654433
Q ss_pred hhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHH-HHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhh
Q 013044 164 AMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMV-GGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMW 232 (451)
Q Consensus 164 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~-~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~ 232 (451)
.......+..|.+|+++||++.|+.+....+|.. ++|.+.+.+.+.. ||+..|++.++.+++.++...
T Consensus 364 ~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~-g~~~~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 364 PVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF-GWDGGFMVMIGGSILAVILLI 432 (452)
T ss_pred HHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHh-cchHHHHHHHHHHHHHHHHHH
Confidence 3334445678999999999999999888888765 4799999999987 899999988887777444333
|
|
| >PRK10054 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=3.3e-11 Score=113.63 Aligned_cols=148 Identities=12% Similarity=0.084 Sum_probs=123.0
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHhhhhhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA-PDFIIMVVGRFVFGIGIGLAMHA 167 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~~~ 167 (451)
.+.+....+++.+.+.+.....+++.|++.||+++|+.+..+..+..++.+...+. ++.+.++++.++.|+|.+...|.
T Consensus 239 ~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~ 318 (395)
T PRK10054 239 SDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPG 318 (395)
T ss_pred cchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhh
Confidence 46677788889999888888888999999999999999999998888888777764 67777888899999999988899
Q ss_pred HHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHH-HHHHhhcccCch
Q 013044 168 APMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI-MGMGMWWLPASP 238 (451)
Q Consensus 168 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~-~~~~~~~~~e~~ 238 (451)
..+++.+..|++.|+++.+..+ ...+|..+||.++|.+.++. |.+..|++.+....+ .++.....+|+|
T Consensus 319 ~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (395)
T PRK10054 319 EYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTL-PPWSLFVILALAIVAAWLLMLKGMRARP 388 (395)
T ss_pred HHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHc-ChhhHHHHHHHHHHHHHHHHHhccccCc
Confidence 9999999999999999988765 55589999999999999988 888888887666555 334444445544
|
|
| >TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.4e-10 Score=111.22 Aligned_cols=121 Identities=20% Similarity=0.291 Sum_probs=104.7
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHhhhhhhHHH
Q 013044 92 SSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA-PDFIIMVVGRFVFGIGIGLAMHAAPM 170 (451)
Q Consensus 92 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~~ 170 (451)
++.+.+++.++..++..++.+++++++||+|+|+++.++.++.+++.++..+. ++.+.+++..++.|++.+...+...+
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 334 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWA 334 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677888888899999999999999999999999999999888888777765 46677788889999999999999999
Q ss_pred HHHhccC-------CCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccch
Q 013044 171 YIAETAP-------TPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGW 213 (451)
Q Consensus 171 ~i~~~~~-------~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~w 213 (451)
+++|..+ ++++|...++.+....+|..+++.+.+.+.+.. ||
T Consensus 335 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~-G~ 383 (437)
T TIGR00792 335 LVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGII-GY 383 (437)
T ss_pred HHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 9998865 456799999999999999999999999987654 44
|
GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners. |
| >PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily | Back alignment and domain information |
|---|
Probab=99.28 E-value=4e-11 Score=115.33 Aligned_cols=150 Identities=21% Similarity=0.281 Sum_probs=135.0
Q ss_pred ccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHH
Q 013044 72 SCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMV 151 (451)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~ 151 (451)
...+|.+.++ .+|.++...|++.+++.+|..++.++.+++.+|+++++.+..+.++.+++.+..+++++.+..+
T Consensus 238 ~aLlPl~a~~------~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~ 311 (524)
T PF05977_consen 238 WALLPLFARD------VLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLAL 311 (524)
T ss_pred HHhhhHHHHH------HhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHH
Confidence 3456666543 1788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHH
Q 013044 152 VGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMG 228 (451)
Q Consensus 152 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~ 228 (451)
++-++.|++.........+.+.+..|++.||+.++++.+....+..+|.++.|.+.+.. |.+..+.+.++..++..
T Consensus 312 ~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~-g~~~al~~a~~~lll~~ 387 (524)
T PF05977_consen 312 IALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHF-GVRTALLIAGAALLLSA 387 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999987 89999888776655533
|
EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function []. |
| >PRK12307 putative sialic acid transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=4.2e-11 Score=114.48 Aligned_cols=129 Identities=14% Similarity=0.128 Sum_probs=99.1
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH--Hhhhhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIG--IGLAMH 166 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~--~~~~~~ 166 (451)
.|.++.+.+.+.+...++..++.++.|++.||+|||+.+..+.++..++.++....++.....+.-++.|++ ..+..+
T Consensus 261 ~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (426)
T PRK12307 261 EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGG 340 (426)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhH
Confidence 577888999999999999999999999999999999999988887776665554433222222222333332 233345
Q ss_pred hHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHh
Q 013044 167 AAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYG 218 (451)
Q Consensus 167 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~ 218 (451)
..+.++.|.+|+++|++++|+......+|..++|.+.+++.+.. ++....+
T Consensus 341 ~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~-g~~~~~~ 391 (426)
T PRK12307 341 LVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITM-GLGAALT 391 (426)
T ss_pred HHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcc-cHHHHHH
Confidence 56678899999999999999999999999999999999998876 6655433
|
|
| >TIGR00887 2A0109 phosphate:H+ symporter | Back alignment and domain information |
|---|
Probab=99.25 E-value=6e-11 Score=115.64 Aligned_cols=138 Identities=13% Similarity=0.000 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhh----HHHHHHHHHHHHHHHhhhhhhHHHHHHhcc
Q 013044 101 SGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPD----FIIMVVGRFVFGIGIGLAMHAAPMYIAETA 176 (451)
Q Consensus 101 s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~----~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 176 (451)
.+..++..++.+++++++||+|||++++++..+.+++.++.++..+ ...+...-+...++..+..+....+.+|.+
T Consensus 342 ~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~ 421 (502)
T TIGR00887 342 IIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVF 421 (502)
T ss_pred HHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccC
Confidence 3445566778899999999999999999888887777666654321 111111112222222334556677889999
Q ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccc---------cchhHHHhhhHHHHHHHHHHhhcccCch
Q 013044 177 PTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV---------AGWRYMYGASTPLAVIMGMGMWWLPASP 238 (451)
Q Consensus 177 ~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~---------~~wr~~f~~~~~~~~~~~~~~~~~~e~~ 238 (451)
|.+.|+++.++.+....+|.++++.+.+.+.+.. .++...|++.+++.++..+..+++||++
T Consensus 422 p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~lpEt~ 492 (502)
T TIGR00887 422 PTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTLLIPETK 492 (502)
T ss_pred chhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHheEeccCC
Confidence 9999999999999999999999999999887732 1456677888777777555566778874
|
This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083). |
| >TIGR00898 2A0119 cation transport protein | Back alignment and domain information |
|---|
Probab=99.25 E-value=9.7e-11 Score=114.57 Aligned_cols=136 Identities=21% Similarity=0.139 Sum_probs=113.3
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhH--HHHHHHHHHHHHHHhhhhhhHHHHHHhccC
Q 013044 100 TSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDF--IIMVVGRFVFGIGIGLAMHAAPMYIAETAP 177 (451)
Q Consensus 100 ~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~--~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 177 (451)
..+..+....+.++.+++.||+|||+++.++.++.+++.++..+.++. +..++.-++.+++.+...+....+..|.+|
T Consensus 361 ~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 440 (505)
T TIGR00898 361 LFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYP 440 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 344556777888999999999999999999999999998888877654 555566677778888888899999999999
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhhcccCch
Q 013044 178 TPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASP 238 (451)
Q Consensus 178 ~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~ 238 (451)
++.|+.++|+.+....+|.+++|.+.+ +.+ . ++..++++.++..++..+..+++||+.
T Consensus 441 ~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~-~-~~~~~~~~~~~~~~~~~~~~~~lpet~ 498 (505)
T TIGR00898 441 TVVRNLGVGVCSTMARVGSIISPFLVY-LGE-K-WLFLPLVLFGGLALLAGILTLFLPETK 498 (505)
T ss_pred HHHHhhhHhHHHHHHHHHHHHHhHHHH-HHH-H-HHhhHHHHHHHHHHHHHHHHHcCcCCC
Confidence 999999999999999999999999998 433 3 677888888888887767777888864
|
|
| >TIGR01272 gluP glucose/galactose transporter | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.8e-10 Score=103.09 Aligned_cols=131 Identities=15% Similarity=0.169 Sum_probs=108.7
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 168 (451)
+|.++.+.++..+.+..+..++.++.+++.||+|+||++.++..+..++.++....++...+ .+-++.|++.+..+|..
T Consensus 173 ~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~-~~~~l~g~~~s~i~P~~ 251 (310)
T TIGR01272 173 LGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAM-WFVLALGLFNSIMFPTI 251 (310)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 68899999999999999999999999999999999999999888888887766665554333 35568899999999999
Q ss_pred HHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHH
Q 013044 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPL 223 (451)
Q Consensus 169 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~ 223 (451)
.+...+..|+ +.+.+.++. ....+|.+++|++.|.+.+.. |.+..|++..+.
T Consensus 252 ~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~-g~~~a~~v~~~~ 303 (310)
T TIGR01272 252 FSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCL-GIQLAFALPVPC 303 (310)
T ss_pred HHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhc-cchHHHHHHHHH
Confidence 9999898875 346666775 456689999999999999987 888888754444
|
Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity. |
| >PRK11663 regulatory protein UhpC; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.5e-10 Score=110.76 Aligned_cols=142 Identities=17% Similarity=0.135 Sum_probs=101.4
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhh--cch-HHHHH---HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADIL--GRR-RELIL---AALLYLVGALVTALAPDFIIMVVGRFVFGIGIG 162 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~--Grr-~~~~~---~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 162 (451)
+|.+..+.++..+.+.++..++.++.|+++||+ ++| +.... +..+..++..+.. ..+.....+..+..|++..
T Consensus 274 ~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~ 352 (434)
T PRK11663 274 LGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMP-FASYVMQAACFFTIGFFVF 352 (434)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcc-cccHHHHHHHHHHHHHHHh
Confidence 688999999999999999999999999999999 333 32222 2121111111111 2333344444445555433
Q ss_pred hhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhh
Q 013044 163 LAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMW 232 (451)
Q Consensus 163 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~ 232 (451)
.........+.|.+|+++|+.++|+.+....+|.+++|.+.+++.+.. ||+..|++.+++.++..+..+
T Consensus 353 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~-g~~~~f~~~~~~~~~~~~~~~ 421 (434)
T PRK11663 353 GPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIW-HWTGFFVVISIAAGISALLLL 421 (434)
T ss_pred hHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhc-ccHHHHHHHHHHHHHHHHHHH
Confidence 223334456789999999999999999999999999999999999987 899999999888777544443
|
|
| >TIGR00900 2A0121 H+ Antiporter protein | Back alignment and domain information |
|---|
Probab=99.24 E-value=5.3e-11 Score=111.20 Aligned_cols=122 Identities=20% Similarity=0.254 Sum_probs=112.9
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHhhhhhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPD-FIIMVVGRFVFGIGIGLAMHA 167 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~-~~~l~~~r~l~G~~~~~~~~~ 167 (451)
++.++.+.+++.+...++..++.++.+++.||+|||+.+..+..+.+++..+..+.++ ++.++++.++.|++.+...+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 321 (365)
T TIGR00900 242 LGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVP 321 (365)
T ss_pred hCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHH
Confidence 5788899999999999999999999999999999999999988888888888887774 888899999999999999999
Q ss_pred HHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccc
Q 013044 168 APMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV 210 (451)
Q Consensus 168 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~ 210 (451)
..+++.|..|+++|++..++.+....+|..+++.+++.+.+..
T Consensus 322 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~ 364 (365)
T TIGR00900 322 QGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHL 364 (365)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999999987753
|
|
| >KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.2e-10 Score=111.41 Aligned_cols=171 Identities=19% Similarity=0.191 Sum_probs=149.2
Q ss_pred HHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhc--chHHHHHHHHHHH
Q 013044 58 ALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILG--RRRELILAALLYL 135 (451)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G--rr~~~~~~~~l~~ 135 (451)
.++..+......+....+|...++ .+.++.+.+.+.++..+...++.++.|+++|+.. ++.+..+++++.+
T Consensus 304 ~~~~~~~~~g~~~p~~~l~~~~~~-------~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~g 376 (509)
T KOG2504|consen 304 ALSNLFAYLGFNVPFVYLPSYAKS-------LGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAG 376 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh-------cCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHH
Confidence 333344444444555667777766 8999999999999999999999999999999988 5667788888899
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhH
Q 013044 136 VGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRY 215 (451)
Q Consensus 136 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~ 215 (451)
++.+.+.++++++.++..-.+.|++.|.........+.|..+.++-..+.|+.....+++..+||++++++.+..++|..
T Consensus 377 l~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~ 456 (509)
T KOG2504|consen 377 LARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDH 456 (509)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeee
Confidence 99999999999999999999999999999988888999999999999999999999999999999999999988756999
Q ss_pred HHhhhHHHHHHHHHHhhccc
Q 013044 216 MYGASTPLAVIMGMGMWWLP 235 (451)
Q Consensus 216 ~f~~~~~~~~~~~~~~~~~~ 235 (451)
.|+..++..++..+.++..+
T Consensus 457 ~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 457 AFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred ehhhcChHHHHHHHHHHHhH
Confidence 99999999888777776665
|
|
| >PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.8e-10 Score=108.37 Aligned_cols=149 Identities=16% Similarity=0.148 Sum_probs=134.9
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcch--HHHHHHHHHHHHHHHHHHH--------hhhHHHHHHHHHHHH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRR--RELILAALLYLVGALVTAL--------APDFIIMVVGRFVFG 158 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr--~~~~~~~~l~~~~~~~~~~--------~~~~~~l~~~r~l~G 158 (451)
+|++..+...+.-+..+...+|++++|++.||+|.| ++++++++++.+..+...+ .++-+.+.+.-++.|
T Consensus 312 lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G 391 (477)
T PF11700_consen 312 LGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIG 391 (477)
T ss_pred cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999 9999999888776666666 678899999999999
Q ss_pred HHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhhcccCc
Q 013044 159 IGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPAS 237 (451)
Q Consensus 159 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~ 237 (451)
+..|...+...++.+|..|+++.+..+|++....-....+||++-+.+.+..++-|+.+....++.++.++++++++.+
T Consensus 392 ~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~~~ 470 (477)
T PF11700_consen 392 LFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVDVE 470 (477)
T ss_pred HHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccch
Confidence 9999999999999999999999999999999999999999999999999887569999998888888866666766554
|
Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins. |
| >TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.8e-10 Score=108.76 Aligned_cols=140 Identities=19% Similarity=0.052 Sum_probs=111.0
Q ss_pred ccCCchhHHHHHHHHHH-HHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHH------hhhHHHHHHHHHHHHHHH
Q 013044 89 YDLSSVEIGLITSGSLY-GALIGSILAFNIADILGRRRELILAALLYLVGALVTAL------APDFIIMVVGRFVFGIGI 161 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~------~~~~~~l~~~r~l~G~~~ 161 (451)
.|.+++++|++...... ...++.++.|++.||+|+|+.+.++..+.++..+.... .++...+.....+.+++.
T Consensus 238 ~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (390)
T TIGR02718 238 AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLIT 317 (390)
T ss_pred cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHH
Confidence 68999999999888764 66777899999999999999998877766443333322 123344455566677778
Q ss_pred hhhhhhHHHHHHhccCC-CCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHH
Q 013044 162 GLAMHAAPMYIAETAPT-PMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGM 229 (451)
Q Consensus 162 ~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~ 229 (451)
+...+...+.+.+..++ +++++.+++.++..++|..+||.++|.+.+.. ||+..|++.+++.++..+
T Consensus 318 g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~-G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 318 GITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRF-GYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccHHHHHHHHHHHHHHHH
Confidence 88888888888888776 78999999999999999999999999999987 899999988877666433
|
RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes. |
| >PRK10504 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.6e-10 Score=110.57 Aligned_cols=122 Identities=19% Similarity=0.237 Sum_probs=106.1
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHhhhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA---PDFIIMVVGRFVFGIGIGLAM 165 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~ 165 (451)
+|.++.+.++......++..++.++.|++.||+|||+++..+..+.+++.++..+. ++.+.+.+..++.|++.+...
T Consensus 292 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 371 (471)
T PRK10504 292 LGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRF 371 (471)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHH
Confidence 57888999999999999999999999999999999999999999888877766653 334445566788899999889
Q ss_pred hhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccc
Q 013044 166 HAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV 210 (451)
Q Consensus 166 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~ 210 (451)
+....++.+..|+++|+.+.++.+....+|..+|+.+++.+.+..
T Consensus 372 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~ 416 (471)
T PRK10504 372 SSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLF 416 (471)
T ss_pred HHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999887644
|
|
| >COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.8e-10 Score=102.39 Aligned_cols=153 Identities=21% Similarity=0.236 Sum_probs=126.4
Q ss_pred cccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHh-hhHHH
Q 013044 71 TSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA-PDFII 149 (451)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~-~~~~~ 149 (451)
+...-|.+++. .|.+.+.++++.-+|.++..+|+.+.|+++|| +.|+.+.....+..+..+...+. ++.+.
T Consensus 231 ftYi~P~L~~v-------~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~ 302 (394)
T COG2814 231 YTYIRPFLESV-------AGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPAL 302 (394)
T ss_pred HHhHHHHHHHc-------cCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHH
Confidence 34445555555 68899999999999999999999999999999 99999888877777777666654 55666
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHH
Q 013044 150 MVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGM 229 (451)
Q Consensus 150 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~ 229 (451)
.++.-++.|++.+.........+++ ..++.+..+.++....+++|..+|..++|.+.++. |+....++.+++.++..+
T Consensus 303 ~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~-g~~~~~~~~a~l~~~a~~ 380 (394)
T COG2814 303 ALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDAL-GYAATGWVGAALLLLALL 380 (394)
T ss_pred HHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-chHHHHHHHHHHHHHHHH
Confidence 6777777888877777777777777 44688999999999999999999999999999996 999999999999888555
Q ss_pred Hhhc
Q 013044 230 GMWW 233 (451)
Q Consensus 230 ~~~~ 233 (451)
..+.
T Consensus 381 ~~~~ 384 (394)
T COG2814 381 LALL 384 (394)
T ss_pred HHHH
Confidence 5443
|
|
| >TIGR00712 glpT glycerol-3-phosphate transporter | Back alignment and domain information |
|---|
Probab=99.20 E-value=1e-10 Score=112.06 Aligned_cols=148 Identities=14% Similarity=0.127 Sum_probs=102.1
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHH---HHHHHHHHh--hhHHHHHHHHHHHHHHHhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYL---VGALVTALA--PDFIIMVVGRFVFGIGIGL 163 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~---~~~~~~~~~--~~~~~l~~~r~l~G~~~~~ 163 (451)
.|.++.+.++..+.+.++..++.+++|+++||+|+++....+..+.. ++.++.... .+.+...+.-++.|++...
T Consensus 282 ~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 361 (438)
T TIGR00712 282 KHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYG 361 (438)
T ss_pred cCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHcc
Confidence 57888999999999999999999999999999975432222322221 222222221 2344444444555554333
Q ss_pred hhhhHHHHHHhccCCCCcchHHHHHHHHHHHH-HHHHHHHhhhhcccccchhHHHhhhHHHHHH-HHHHhhcccCc
Q 013044 164 AMHAAPMYIAETAPTPMRGQLISLKEFFIVLG-MVGGYGIGSLLVDLVAGWRYMYGASTPLAVI-MGMGMWWLPAS 237 (451)
Q Consensus 164 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G-~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~-~~~~~~~~~e~ 237 (451)
..........|.+|+++|+++.|+.+....+| .+++|.+.+.+.+.. ||...|++..+..++ .+...+..||+
T Consensus 362 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (438)
T TIGR00712 362 PVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF-GWDGGFMVMIGGSILAVILLIVVMIGE 436 (438)
T ss_pred HHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhc-cchHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 32333346789999999999999998877776 578999999999987 899999888777666 44555556664
|
This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar. |
| >TIGR00881 2A0104 phosphoglycerate transporter family protein | Back alignment and domain information |
|---|
Probab=99.18 E-value=7.1e-11 Score=110.94 Aligned_cols=128 Identities=23% Similarity=0.231 Sum_probs=98.3
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcc-hHHHH-HHH-HHHHHHHHHHHH--hhhHHHHHHHHHHHHHHHhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGR-RRELI-LAA-LLYLVGALVTAL--APDFIIMVVGRFVFGIGIGL 163 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~~~~-~~~-~l~~~~~~~~~~--~~~~~~l~~~r~l~G~~~~~ 163 (451)
++.++.+.++..+...++..++.++.|++.||+++ |+... ... .+..++...... ..+.+.+++..++.|+....
T Consensus 247 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 326 (379)
T TIGR00881 247 KGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYG 326 (379)
T ss_pred hCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhh
Confidence 68899999999999999999999999999998643 33222 221 222222222222 23556666777788877666
Q ss_pred hhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHH
Q 013044 164 AMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMY 217 (451)
Q Consensus 164 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f 217 (451)
..+....++.|..|+++|+++.++.+....+|..++|.+.+.+.+.. ||++.|
T Consensus 327 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~-g~~~~f 379 (379)
T TIGR00881 327 PQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGF-GWAGAF 379 (379)
T ss_pred hhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhh-cccccC
Confidence 66777788999999999999999999999999999999999999987 898764
|
|
| >PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.6e-10 Score=106.06 Aligned_cols=147 Identities=14% Similarity=0.188 Sum_probs=127.4
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHH
Q 013044 90 DLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAP 169 (451)
Q Consensus 90 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 169 (451)
+.+....|.+.+...+..++...+..++.+|+|.|+.++++..+..+=-+++++++|.+.+.+.+.+.|+-.+.......
T Consensus 255 ~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~f 334 (412)
T PF01306_consen 255 GQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAF 334 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 55667899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCcchHHHHH-HHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHH-HHHHhhcccCc
Q 013044 170 MYIAETAPTPMRGQLISLK-EFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI-MGMGMWWLPAS 237 (451)
Q Consensus 170 ~~i~~~~~~~~r~~~~~~~-~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~-~~~~~~~~~e~ 237 (451)
.|+++.+|+|-.++...+. +.+..+|.++.+.++|.+.|+. |.+..|++.+.+.++ .++..+.++++
T Consensus 335 kYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~-G~~~tylimg~iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 335 KYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRI-GFQHTYLIMGLIVLPFTLISAFTLKKD 403 (412)
T ss_dssp HHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHS--S
T ss_pred HHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhc-CcHHHHHHHHHHHHHHHHHheeeecCC
Confidence 9999999988777777774 7889999999999999999998 999999998888777 44555555543
|
The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A. |
| >PRK15075 citrate-proton symporter; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=5.6e-10 Score=106.82 Aligned_cols=125 Identities=22% Similarity=0.159 Sum_probs=94.8
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHH-HH---HhhhHHHHHHHHHHHHHHHhhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALV-TA---LAPDFIIMVVGRFVFGIGIGLA 164 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~-~~---~~~~~~~l~~~r~l~G~~~~~~ 164 (451)
+|.+..+.++....+.++..++.+++|+++||+|||++++.+.++..+..+. .. ..+++..+.+..++.|++.+..
T Consensus 269 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 348 (434)
T PRK15075 269 LHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSY 348 (434)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHH
Confidence 5888888999999999999999999999999999999988765544332221 11 1234444555566677777777
Q ss_pred hhhHHHHHHhccCCCCcchHHHHHHH-HHHHHHHHHHHHhhhhcccccchh
Q 013044 165 MHAAPMYIAETAPTPMRGQLISLKEF-FIVLGMVGGYGIGSLLVDLVAGWR 214 (451)
Q Consensus 165 ~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~~g~~l~~~l~~~~~~wr 214 (451)
.+....++.|.+|+++|+...++... +..++..++|.+.+++.+.. |++
T Consensus 349 ~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~-g~~ 398 (434)
T PRK15075 349 NGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVT-GDK 398 (434)
T ss_pred HhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhc-CCc
Confidence 77777889999999999999998644 44455778999999998876 654
|
|
| >PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=99.16 E-value=3.2e-09 Score=91.19 Aligned_cols=176 Identities=19% Similarity=0.146 Sum_probs=132.2
Q ss_pred HHHHHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHH
Q 013044 52 LPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAA 131 (451)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~ 131 (451)
..++.........| ....++..-|++.+. +|+|.+|...+.+...+|..+ .++.|.+.|++|++.++++|.
T Consensus 3 ~~l~a~~~v~~~~G-t~Y~Fs~yS~~Lk~~-------l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~ 73 (250)
T PF06813_consen 3 LSLVASIWVQLCSG-TTYTFSAYSPQLKSR-------LGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGA 73 (250)
T ss_pred hhHHHHHHHHHhcC-cccchhhhhHHHHHH-------hCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHH
Confidence 33333444444444 233345556777777 899999999999999999987 488999999999999999999
Q ss_pred HHHHHHHHHHHHh-------hhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhh
Q 013044 132 LLYLVGALVTALA-------PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGS 204 (451)
Q Consensus 132 ~l~~~~~~~~~~~-------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~ 204 (451)
+...+|..+...+ .++|.+.+..++.|.+.+.....+.....+.+| ++||.+.|+.-...+++..+-..+-.
T Consensus 74 ~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~ 152 (250)
T PF06813_consen 74 VLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYS 152 (250)
T ss_pred HHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHH
Confidence 9999998888653 357888888888888888777777777788888 68999999999999999888777776
Q ss_pred hhcccccchhHHHhhhHHHHHHHHHHhhcccCch
Q 013044 205 LLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASP 238 (451)
Q Consensus 205 ~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~ 238 (451)
.+.+.. .-+..+.+...+.++.++..++++..|
T Consensus 153 ~~f~~~-~~~fll~la~~~~~v~l~~~~~vr~~~ 185 (250)
T PF06813_consen 153 AFFGDD-PSSFLLFLAVLPAVVCLVAMFFVRPVP 185 (250)
T ss_pred HHcCCC-hHHHHHHHHHHHHHHHHHHhhheeccC
Confidence 665543 445555554445555555556655443
|
|
| >PRK10406 alpha-ketoglutarate transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=9.9e-10 Score=105.06 Aligned_cols=147 Identities=13% Similarity=-0.005 Sum_probs=96.6
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHH--H--hhhHHHHHHHHHHHHHHHhhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTA--L--APDFIIMVVGRFVFGIGIGLA 164 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~--~--~~~~~~l~~~r~l~G~~~~~~ 164 (451)
+|.+..+.++..++..++..+++++.|+++||+|||+.+.++..+.++..+... . .++....+..-.+.+++.+..
T Consensus 274 ~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (432)
T PRK10406 274 AGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFY 353 (432)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHH
Confidence 688888999999998888899999999999999999988776665443332221 1 123332222222233334444
Q ss_pred hhhHHHHHHhccCCCCcchHHHHHHHHHHH-HHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhhcccC
Q 013044 165 MHAAPMYIAETAPTPMRGQLISLKEFFIVL-GMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPA 236 (451)
Q Consensus 165 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e 236 (451)
.+....++.|++|++.|+.+.|+.+....+ +....|.+.+.+ +..+.|...+++.++..++..+..+++++
T Consensus 354 ~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~~~l~~ 425 (432)
T PRK10406 354 TSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFLVSLMLHR 425 (432)
T ss_pred HHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHHHHHHhhh
Confidence 455677889999999999999998765443 344477777755 33324666666666666665555455443
|
|
| >PRK11646 multidrug resistance protein MdtH; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=4.4e-10 Score=106.17 Aligned_cols=140 Identities=16% Similarity=0.092 Sum_probs=113.0
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHhhhhh-hhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhH
Q 013044 90 DLSSVEIGLITSGSLYGALIGSILAFNIAD-ILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (451)
Q Consensus 90 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d-r~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 168 (451)
+.++.+.+++.++..++...+..+.+++.| |++.++.+..+.++.+++.++.+++++++.+++..++.|++.+...|..
T Consensus 239 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~ 318 (400)
T PRK11646 239 AGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPAR 318 (400)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccH
Confidence 446788899988888877777766677775 4676777788888888888888888888888888889999999888999
Q ss_pred HHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhccccc--c-hhHHHhhhHHHHHHHHH
Q 013044 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVA--G-WRYMYGASTPLAVIMGM 229 (451)
Q Consensus 169 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~--~-wr~~f~~~~~~~~~~~~ 229 (451)
.+++.|..|+++||+.+++.+....+|..+||.++|++.+... + -...+++.++.+++..+
T Consensus 319 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (400)
T PRK11646 319 ETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLL 382 (400)
T ss_pred HHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999987631 2 34555555555555433
|
|
| >COG2270 Permeases of the major facilitator superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.14 E-value=4.3e-10 Score=101.12 Aligned_cols=149 Identities=17% Similarity=0.161 Sum_probs=136.8
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 168 (451)
+|++..+...+.....+..+++++++|++.||+|.|+++.+++++..+.++..-+...-..+.++-.+.|...|+....+
T Consensus 283 ~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~S 362 (438)
T COG2270 283 LGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASS 362 (438)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHH
Confidence 89999999999999999999999999999999999999999999999999988888887888888899999999999999
Q ss_pred HHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhhcccCc
Q 013044 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPAS 237 (451)
Q Consensus 169 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~ 237 (451)
.++.++..|+++-++.+|++....-.+..+||.+.+.+.+..++-|.-+....++..+.++.++.+|++
T Consensus 363 RSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 363 RSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence 999999999999999999999999999999999999999877678888887777777766777777654
|
|
| >PRK10091 MFS transport protein AraJ; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=8.7e-10 Score=103.68 Aligned_cols=138 Identities=12% Similarity=0.131 Sum_probs=106.4
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHhhhhhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL-APDFIIMVVGRFVFGIGIGLAMHA 167 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~-~~~~~~l~~~r~l~G~~~~~~~~~ 167 (451)
+|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+..+.+++.++... .++.+..++..++.+++.....+.
T Consensus 230 ~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 309 (382)
T PRK10091 230 SGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAP 309 (382)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHH
Confidence 6889999999999999999999999999999999999999998888887766543 456666667777777776555444
Q ss_pred HHH-HHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHH
Q 013044 168 APM-YIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMG 228 (451)
Q Consensus 168 ~~~-~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~ 228 (451)
... ...+..+++.++.. ..+....+|..+||.+++.+.+...+|++.+.+.++.+++.+
T Consensus 310 ~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~ 369 (382)
T PRK10091 310 LQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAM 369 (382)
T ss_pred HHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHH
Confidence 443 34444444444443 346778999999999999999864489999999887777633
|
|
| >PLN00028 nitrate transmembrane transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=5.3e-10 Score=108.02 Aligned_cols=144 Identities=15% Similarity=-0.020 Sum_probs=104.8
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcch-------HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRR-------RELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGI 161 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr-------~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 161 (451)
+|.+..+.+++.+++.++..++.+++|+++||+||| ....+..++.++..++....++.+..++.-++.+++.
T Consensus 283 ~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~ 362 (476)
T PLN00028 283 FGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFV 362 (476)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHH
Confidence 689999999999999999999999999999999875 2333344444444445555666666666667777776
Q ss_pred hhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhhccc
Q 013044 162 GLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLP 235 (451)
Q Consensus 162 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~ 235 (451)
+...+...+++.+..| ++||...|+...+..+|..+++.+.+ .... .+|+..|++.+++.++..++.++++
T Consensus 363 ~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~-~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 363 QAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF-TGSS-YSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred HHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH-hcCC-ccHhhHHHHHHHHHHHHHHHHHhee
Confidence 6666666666666644 78999999998877778777776644 1122 2799999999888877666666654
|
|
| >TIGR00896 CynX cyanate transporter | Back alignment and domain information |
|---|
Probab=99.13 E-value=8e-10 Score=102.91 Aligned_cols=126 Identities=20% Similarity=0.171 Sum_probs=102.7
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhh-cchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADIL-GRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHA 167 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 167 (451)
.|.+..+.+.+.+...++..++.++.|++.||+ +||+.+.++..+.+++.++..+.++..... .-++.|++.+...+.
T Consensus 227 ~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~~~g~~~~~ 305 (355)
T TIGR00896 227 HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVLGLGQGGAFPL 305 (355)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHHHHhhhhHhHH
Confidence 688899999999999999999999999999999 567777788888888877777665433322 457789999999988
Q ss_pred HHHHHHhccC-CCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhH
Q 013044 168 APMYIAETAP-TPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRY 215 (451)
Q Consensus 168 ~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~ 215 (451)
..+.+.+..+ +++++...++.+....+|..++|.+.+++.++.++|.+
T Consensus 306 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~~~~ 354 (355)
T TIGR00896 306 ALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGNWLM 354 (355)
T ss_pred HHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 8887776554 46678999999988899999999999999987645553
|
This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate. |
| >PRK10213 nepI ribonucleoside transporter; Reviewed | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.8e-09 Score=101.79 Aligned_cols=136 Identities=15% Similarity=0.121 Sum_probs=112.0
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 168 (451)
+|.+..+.+++...+.++..++.++.+++.||.+++..+....+......++....++.+.+.+..++.|++.+...+..
T Consensus 247 ~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~~~~~~ 326 (394)
T PRK10213 247 AGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGW 326 (394)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhHHH
Confidence 78899999999999999999999999999999654444443443344445555566778888889999999999999999
Q ss_pred HHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHH
Q 013044 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (451)
Q Consensus 169 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~ 226 (451)
.+++.+..| +++++..++......+|..+|+.++|.+.+.. |++..++..+.+.++
T Consensus 327 ~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~-g~~~~~~~~~~~~~~ 382 (394)
T PRK10213 327 STWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNI-GLTSPLMLSGTLMLL 382 (394)
T ss_pred HHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ChhhHHHHHHHHHHH
Confidence 989998887 56778888888899999999999999999987 899988887776555
|
|
| >PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.12 E-value=8.9e-10 Score=118.76 Aligned_cols=138 Identities=21% Similarity=0.247 Sum_probs=120.5
Q ss_pred ccCCch-hHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhh
Q 013044 89 YDLSSV-EIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHA 167 (451)
Q Consensus 89 ~~~s~~-~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 167 (451)
+|.+.. +.|++.+...++..++.+++|+++||+++|+++.++.++.+++.++..+..+.+.++++.++.|++.+...+.
T Consensus 263 ~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 342 (1146)
T PRK08633 263 LGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVP 342 (1146)
T ss_pred hCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHH
Confidence 688888 9999999999999999999999999999999999999999988888888889999999999999999999999
Q ss_pred HHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHH
Q 013044 168 APMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (451)
Q Consensus 168 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~ 226 (451)
..+++.+..|+++||+++++.+....+|.++++.+++.+.....++...|++.+.+.++
T Consensus 343 ~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 401 (1146)
T PRK08633 343 LNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLI 401 (1146)
T ss_pred HHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888888877654222566666666555444
|
|
| >KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.1e-09 Score=99.61 Aligned_cols=148 Identities=19% Similarity=0.146 Sum_probs=114.8
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhh---hHH------HHHHHHHHHHH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP---DFI------IMVVGRFVFGI 159 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~---~~~------~l~~~r~l~G~ 159 (451)
-|++..+..+++....+...+..+++..+.||+|||+.++.+..+..+..++..... +.. ..+++.++..+
T Consensus 300 aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~ 379 (485)
T KOG0569|consen 300 AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFII 379 (485)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 589999999999999999999999999999999999999999999988888776542 211 12344444444
Q ss_pred HHhh-hhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHH-HHHHhhcccCc
Q 013044 160 GIGL-AMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI-MGMGMWWLPAS 237 (451)
Q Consensus 160 ~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~-~~~~~~~~~e~ 237 (451)
+.+. ..|...-+.+|.+|++.|..++++.....-+..++-...-..+.+.. |= +.|.+..+++++ .+..+..+||+
T Consensus 380 ~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~-g~-~~filF~i~~~~~~i~~~~~lPET 457 (485)
T KOG0569|consen 380 SFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVI-GP-YVFILFVIPLAIFLIYLYRYLPET 457 (485)
T ss_pred hhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cc-hhhHHHHHHHHHHHHHHHHhCccc
Confidence 3332 46778888999999999999999998888887777666666665555 33 777777777777 66677789998
Q ss_pred h
Q 013044 238 P 238 (451)
Q Consensus 238 ~ 238 (451)
.
T Consensus 458 k 458 (485)
T KOG0569|consen 458 K 458 (485)
T ss_pred C
Confidence 5
|
|
| >PF03825 Nuc_H_symport: Nucleoside H+ symporter | Back alignment and domain information |
|---|
Probab=99.10 E-value=3.9e-09 Score=98.64 Aligned_cols=147 Identities=22% Similarity=0.294 Sum_probs=119.2
Q ss_pred cc-CCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHh-hhHHHHH----HHHHHHHHHHh
Q 013044 89 YD-LSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA-PDFIIMV----VGRFVFGIGIG 162 (451)
Q Consensus 89 ~~-~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~-~~~~~l~----~~r~l~G~~~~ 162 (451)
.| .+....+.+.++..++....-...+++..|+|.|+++.++.+..++=..+.+.. ++.+... +...+.|+..+
T Consensus 237 ~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~ 316 (400)
T PF03825_consen 237 LGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFG 316 (400)
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHH
Confidence 45 567778888889999999999999999999999999999999999998888887 5544433 33557999999
Q ss_pred hhhhhHHHHHHhccCCCCcchHHHHHHH-HHHHHHHHHHHHhhhhcccccc------hhHHHhhhHHHHHHH-HHHhhcc
Q 013044 163 LAMHAAPMYIAETAPTPMRGQLISLKEF-FIVLGMVGGYGIGSLLVDLVAG------WRYMYGASTPLAVIM-GMGMWWL 234 (451)
Q Consensus 163 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~~g~~l~~~l~~~~~~------wr~~f~~~~~~~~~~-~~~~~~~ 234 (451)
..+.....++.+..|++.|+++.+++.+ ..++|..+|..++|++.+.. | |...+.+.+.+.++. ++.+++.
T Consensus 317 ~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~-g~~~~~~~~~~~~v~a~~~~~~~~~f~~~f 395 (400)
T PF03825_consen 317 LFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAF-GARGMFDWSAVFLVFAVMALVILVLFVILF 395 (400)
T ss_pred HHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cchhhhhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999876 57899999999999999865 4 445555666655553 3333344
Q ss_pred cC
Q 013044 235 PA 236 (451)
Q Consensus 235 ~e 236 (451)
+|
T Consensus 396 k~ 397 (400)
T PF03825_consen 396 KP 397 (400)
T ss_pred cC
Confidence 44
|
|
| >PRK15402 multidrug efflux system translocase MdfA; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=3.1e-09 Score=100.86 Aligned_cols=136 Identities=17% Similarity=0.164 Sum_probs=111.5
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHHHHHHhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA-----PDFIIMVVGRFVFGIGIGL 163 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~-----~~~~~l~~~r~l~G~~~~~ 163 (451)
++.++.+.++......++..++.++.|+++||+|+|+.+.++..+..++.++..+. ++++.++++-++.|++.+.
T Consensus 246 ~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~ 325 (406)
T PRK15402 246 EQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGL 325 (406)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHH
Confidence 68888999998888888999999999999999999999999988888777777653 3567778889999999988
Q ss_pred hhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHH
Q 013044 164 AMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (451)
Q Consensus 164 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~ 226 (451)
..+......... ++++||+..+..+....+|..+|+.+++.+.+.. ++....+..++.+++
T Consensus 326 ~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~-~~~~~~~~~~~~~~~ 386 (406)
T PRK15402 326 ANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGG-GNGLFNLFNLANGLL 386 (406)
T ss_pred HhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCC-chHHHHHHHHHHHHH
Confidence 777766655443 4589999999999999999999999999998876 666655555544444
|
|
| >PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins | Back alignment and domain information |
|---|
Probab=99.08 E-value=3.6e-10 Score=107.10 Aligned_cols=325 Identities=18% Similarity=0.092 Sum_probs=185.1
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhc-----chHHHHHHHHHHHHHHHHHHHh----hhHHHHHHHHHHHHH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILG-----RRRELILAALLYLVGALVTALA----PDFIIMVVGRFVFGI 159 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G-----rr~~~~~~~~l~~~~~~~~~~~----~~~~~l~~~r~l~G~ 159 (451)
+|+++++.....++..+...+ .++.|.++|-+- ||+-++++.++..++.+..+.. .+.....++-++..+
T Consensus 20 l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~ 98 (433)
T PF03092_consen 20 LGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASF 98 (433)
T ss_pred cCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHH
Confidence 899999999988888887755 568899999863 5556666777776666656553 346667777788999
Q ss_pred HHhhhhhhHHHHHHhccC--CCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhh-cccC
Q 013044 160 GIGLAMHAAPMYIAETAP--TPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMW-WLPA 236 (451)
Q Consensus 160 ~~~~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~-~~~e 236 (451)
|.+....++-+++.|... ++.||...+.......+|.+++..++|.+.+.. ++|+.|.+.+++..+..+..+ ..+|
T Consensus 99 g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~-~~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 99 GYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSF-GPQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred HHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcC-CCeEEehHHHHHHHHHHHHHHHhhhh
Confidence 999999999999999983 344788888889999999999999999999987 899999998887777444444 4444
Q ss_pred chHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhcccchhHHHH-HHHH
Q 013044 237 SPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALII-GAGL 315 (451)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 315 (451)
.+. . ++.+.....++ ..+..... .++.-...++.++.+..+...+ ..++
T Consensus 178 ~~~-----~--~~~~~~~~~~~---------------~~~~~~~~--------~~~~~~~l~~~~~~~~i~~~~~~~~~~ 227 (433)
T PF03092_consen 178 RKV-----R--PADEVFSFGKE---------------EVPCLFGS--------FREQLSELWRALQQRAIWQPILFFIFF 227 (433)
T ss_pred ccc-----c--ccchhhccccc---------------ccchhhHH--------HHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 111 0 00000000000 00000000 0001112333344332232222 1111
Q ss_pred HHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhh
Q 013044 316 VLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYY 395 (451)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~ 395 (451)
..+..........+|....+..-++ ++...+....+..++.++|..+......+..-|+++....++..+..+.-..+.
T Consensus 228 ~~~~~~~~~a~~fy~~~~~~~gp~f-s~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv 306 (433)
T PF03092_consen 228 FNLPPSISSASSFYFQTDALGGPHF-SPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLV 306 (433)
T ss_pred HHhccCCCCccEEEEEecccccccc-CHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEE
Confidence 1111111101011222111111126 777777777788888888888877766666666766655544433322111110
Q ss_pred hc-c----CCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheeeee
Q 013044 396 LF-L----DDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCAKL 449 (451)
Q Consensus 396 ~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (451)
.. + -+..+..+.--++......+ .+.|. ..+..++.|+...|+..++-+++
T Consensus 307 ~~~n~~~Gi~d~~f~lgd~~l~~~~~~i--~~mP~-lvl~a~lcP~G~Egt~yall~s~ 362 (433)
T PF03092_consen 307 TRWNLDLGIPDQWFALGDTILEEVIGMI--AFMPS-LVLAARLCPKGSEGTVYALLASF 362 (433)
T ss_pred EEEeeeeCcCCeEEEEEhHHHHHHHHHH--HHHHH-HHHHHHHCCCCchHHHHHHHHHH
Confidence 00 0 01112222222333333333 23333 45678888999999888876543
|
Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus). |
| >PRK09848 glucuronide transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.5e-08 Score=97.57 Aligned_cols=121 Identities=21% Similarity=0.252 Sum_probs=100.1
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHhhhhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP--DFIIMVVGRFVFGIGIGLAMH 166 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~ 166 (451)
+|.++...++......++..++.++++++.||+|+|+++.++.++.+++.++..+.+ +++.+++..++.|+|.+...+
T Consensus 259 ~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~ 338 (448)
T PRK09848 259 LNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMT 338 (448)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHH
Confidence 565555555555555677888999999999999999999999999888888777653 677777888899999999999
Q ss_pred hHHHHHHhccCCC-------CcchHHHHHHHHHHHHHHHHHHHhhhhccc
Q 013044 167 AAPMYIAETAPTP-------MRGQLISLKEFFIVLGMVGGYGIGSLLVDL 209 (451)
Q Consensus 167 ~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~ 209 (451)
...++.+|..|.+ ++|...++.+....+|..+|+.+.+.+.+.
T Consensus 339 ~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~ 388 (448)
T PRK09848 339 VMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGL 388 (448)
T ss_pred HHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988643 459999999999999999999998887643
|
|
| >TIGR02332 HpaX 4-hydroxyphenylacetate permease | Back alignment and domain information |
|---|
Probab=99.07 E-value=7.3e-10 Score=105.11 Aligned_cols=135 Identities=18% Similarity=0.125 Sum_probs=96.3
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHH-HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhH
Q 013044 90 DLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRE-LILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (451)
Q Consensus 90 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~-~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 168 (451)
+.+..+.++..+...++..++.+++|+++||+|||+. +....++.+++.++....++....+++-.+.++|.....+..
T Consensus 275 ~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 354 (412)
T TIGR02332 275 GSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIF 354 (412)
T ss_pred CCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHH
Confidence 5677889999999999999999999999999997774 344444444433322223232222222233333433333444
Q ss_pred HHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHH
Q 013044 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLA 224 (451)
Q Consensus 169 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~ 224 (451)
.....|.+|+++|+.+.|+.+....+|.+++|.+.+.+.+..++|++.|++.++..
T Consensus 355 ~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 355 WTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAALL 410 (412)
T ss_pred HhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHHH
Confidence 45557788999999999999999999999999999999987756999988766643
|
This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially. |
| >PRK11902 ampG muropeptide transporter; Reviewed | Back alignment and domain information |
|---|
Probab=99.06 E-value=5.1e-09 Score=99.22 Aligned_cols=140 Identities=19% Similarity=0.214 Sum_probs=103.3
Q ss_pred ccCCchhHHHHHHHH-HHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHH---HHh-hhHHHHHHHHH----HHHH
Q 013044 89 YDLSSVEIGLITSGS-LYGALIGSILAFNIADILGRRRELILAALLYLVGALVT---ALA-PDFIIMVVGRF----VFGI 159 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~-~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~---~~~-~~~~~l~~~r~----l~G~ 159 (451)
+|.++.+.+++.+.. .++..++.+++|++.||+|+|+.+.++..+..+..+.. ++. ++.+.++++-+ ..|+
T Consensus 240 ~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 319 (402)
T PRK11902 240 AGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGM 319 (402)
T ss_pred cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Confidence 788999999998665 45689999999999999999999887777766554433 343 45566665554 4555
Q ss_pred HHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhhc
Q 013044 160 GIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW 233 (451)
Q Consensus 160 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~ 233 (451)
+.+...+....++.+.+|.+ ..++.+...++|..+++.++|.+.+.. ||+..|.+.++++++.++..+.
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~G~l~~~~-G~~~~f~~~~~~~~~~~~~~~~ 388 (402)
T PRK11902 320 GTAAFVALLMALCNRSFSAT----QYALLSALASVGRVYVGPTSGYLVEAY-GWPGFYLMTVVIALPGLALLWL 388 (402)
T ss_pred HHHHHHHHHHHhcCCCCcHH----HHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHH
Confidence 56666666666777666644 456666666788877778899999988 9999999998888775554433
|
|
| >PRK10429 melibiose:sodium symporter; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.1e-08 Score=98.89 Aligned_cols=118 Identities=16% Similarity=0.120 Sum_probs=96.8
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHH-----hhhHHHHHHHHHHHHHHHhhhhh
Q 013044 92 SSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL-----APDFIIMVVGRFVFGIGIGLAMH 166 (451)
Q Consensus 92 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~-----~~~~~~l~~~r~l~G~~~~~~~~ 166 (451)
+....+++.+...++..++.+++++++||+|+|+.+.++..+..++.+...+ .++.+.+++.-++.|++.+...+
T Consensus 264 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~ 343 (473)
T PRK10429 264 DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWV 343 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHH
Confidence 4556677778777899999999999999999999999888877766655543 34567777888899999999999
Q ss_pred hHHHHHHhccC-------CCCcchHHHHHHHHHHHHHHHHHHHhhhhccc
Q 013044 167 AAPMYIAETAP-------TPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL 209 (451)
Q Consensus 167 ~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~ 209 (451)
...++++|..+ .++.|..++......-+|..+++.+.+++.+.
T Consensus 344 ~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~ 393 (473)
T PRK10429 344 LQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGL 393 (473)
T ss_pred HHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999965 33346688999999999999999999987753
|
|
| >PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.7e-09 Score=114.73 Aligned_cols=138 Identities=19% Similarity=0.063 Sum_probs=116.7
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHh--------------------hhHH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA--------------------PDFI 148 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~--------------------~~~~ 148 (451)
+|.+..+.|++.+.+.++.+++.++.|+++|+.++++.+..+.++.+++.+..++. ++.+
T Consensus 256 ~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (1140)
T PRK06814 256 LGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGW 335 (1140)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccH
Confidence 68899999999999999999999999999998888777776666666665544443 6778
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHH
Q 013044 149 IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (451)
Q Consensus 149 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~ 226 (451)
.++++.++.|++.+...+...+++.+.+|+++||+++|+.++...+|..+++++.+.+.....++...+++.+++.++
T Consensus 336 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~ 413 (1140)
T PRK06814 336 RILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALANLI 413 (1140)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 888999999999999999999999999999999999999999999999999999998874333677777766655444
|
|
| >TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.7e-07 Score=92.55 Aligned_cols=144 Identities=16% Similarity=0.237 Sum_probs=119.2
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhh-hcchHHHHHHHHHHHHHHHHHHHhhh--------HHHHHHHHHHHHH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADI-LGRRRELILAALLYLVGALVTALAPD--------FIIMVVGRFVFGI 159 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~l~~~~~~~~~~~~~--------~~~l~~~r~l~G~ 159 (451)
++.+.+....+...+....-+..+++|.++|+ +||++.++++.++..+|.++.++... ....+++-.+..+
T Consensus 18 lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~ 97 (654)
T TIGR00926 18 LGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIAL 97 (654)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHh
Confidence 67888888889999999999999999999996 69999999999999999988877421 2346677888899
Q ss_pred HHhhhhhhHHHHHHhccCCC---CcchHHHHHHHHHHHHHHHHHHHhhhhcccc------cchhHHHhhhHHHHHHHHHH
Q 013044 160 GIGLAMHAAPMYIAETAPTP---MRGQLISLKEFFIVLGMVGGYGIGSLLVDLV------AGWRYMYGASTPLAVIMGMG 230 (451)
Q Consensus 160 ~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~------~~wr~~f~~~~~~~~~~~~~ 230 (451)
|.|+.-+...+...|.++++ +|-..+.++..+.++|..+++.+..++.+.. .+|...|.+.++..++.++.
T Consensus 98 G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lv 177 (654)
T TIGR00926 98 GTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIV 177 (654)
T ss_pred hccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHH
Confidence 99999999999999999754 3667888889999999999999988886321 26999999998888875544
Q ss_pred hh
Q 013044 231 MW 232 (451)
Q Consensus 231 ~~ 232 (451)
..
T Consensus 178 f~ 179 (654)
T TIGR00926 178 FM 179 (654)
T ss_pred HH
Confidence 43
|
|
| >TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.8e-09 Score=104.51 Aligned_cols=146 Identities=13% Similarity=0.074 Sum_probs=101.1
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHH--------HHHHHHHH--HHHHHHHHH-hhhHHHHHHHHHHH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRE--------LILAALLY--LVGALVTAL-APDFIIMVVGRFVF 157 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~--------~~~~~~l~--~~~~~~~~~-~~~~~~l~~~r~l~ 157 (451)
+|.+..+.|++.++..++..++.++.|+++||+++|+. +..+.... ++..+.... ..+....+++-.+.
T Consensus 292 ~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 371 (465)
T TIGR00894 292 LRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLA 371 (465)
T ss_pred hCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHH
Confidence 68899999999999999999999999999999875421 11111111 111111122 23444445555555
Q ss_pred HHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccc--cchhHHHhhhHHHHHHHHHHhhccc
Q 013044 158 GIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV--AGWRYMYGASTPLAVIMGMGMWWLP 235 (451)
Q Consensus 158 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~--~~wr~~f~~~~~~~~~~~~~~~~~~ 235 (451)
+.+.+...+.......|..| +.+|.+.++.+....+|..++|.+.+.+.+.. .+|+..|++.++..++..+...+++
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~ 450 (465)
T TIGR00894 372 NAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIFG 450 (465)
T ss_pred HHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeeee
Confidence 65555555555555567666 58999999999999999999999999887642 3589999998888777555554443
|
|
| >TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily | Back alignment and domain information |
|---|
Probab=99.01 E-value=9.9e-09 Score=96.71 Aligned_cols=128 Identities=20% Similarity=0.337 Sum_probs=99.7
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHHHHHHhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA-----PDFIIMVVGRFVFGIGIGL 163 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~-----~~~~~l~~~r~l~G~~~~~ 163 (451)
+|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+..+..++.++..+. ++...+++..++.|++.+.
T Consensus 237 ~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 316 (385)
T TIGR00710 237 MGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSM 316 (385)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 68899999999999999999999999999999999999998888888777766553 2345556667889999999
Q ss_pred hhhhHHHHHHhccCCCCcchHHHHHHHHHH-HHHHHHHHHhhhhcccccchhHHHhh
Q 013044 164 AMHAAPMYIAETAPTPMRGQLISLKEFFIV-LGMVGGYGIGSLLVDLVAGWRYMYGA 219 (451)
Q Consensus 164 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~-~G~~~g~~l~~~l~~~~~~wr~~f~~ 219 (451)
..+.......|..| ++|+++.++.+.... .|.+.++.++ .+.+.. +|...+..
T Consensus 317 ~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~-~~~~~~-~~~~~~~~ 370 (385)
T TIGR00710 317 ISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVS-LIHGNT-AWPMSLSC 370 (385)
T ss_pred HHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHH-hccccC-hHHHHHHH
Confidence 99999999888876 678999999876654 4666666655 443332 45444443
|
This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033. |
| >PRK11195 lysophospholipid transporter LplT; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.2e-08 Score=96.13 Aligned_cols=135 Identities=17% Similarity=0.113 Sum_probs=109.5
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 168 (451)
+|.++.+.|++.+.+.++..+++++.+++.||+++|+++..+. +.++..++.++.++++..++..++.|++.+...+..
T Consensus 236 lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~ 314 (393)
T PRK11195 236 LGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGI-LMGLVVLLMALQHSLLPAYPLLILIGALGGFFVVPM 314 (393)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHH-HHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhH
Confidence 6889999999999999999999999999999999999888875 445555556667788878888889999999888888
Q ss_pred HHHHHhccCCCC-cchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHH
Q 013044 169 PMYIAETAPTPM-RGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (451)
Q Consensus 169 ~~~i~~~~~~~~-r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~ 226 (451)
.+.+.+..|++. +|++.++.+....+|..++..+.+.+... |-|..+++.+...++
T Consensus 315 ~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 371 (393)
T PRK11195 315 NALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVKL--GVPVVAVIVGFGLLV 371 (393)
T ss_pred HHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHHc--CCCHHHHHHHHHHHH
Confidence 888888766554 79999999999999999999999876443 556555554444333
|
|
| >COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=98.98 E-value=7.2e-09 Score=94.39 Aligned_cols=154 Identities=33% Similarity=0.491 Sum_probs=124.2
Q ss_pred ccccccccccccccCCCCCCcccccCCc--hhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHH
Q 013044 66 YDIGSTSCATISIESPTLSGISWYDLSS--VEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL 143 (451)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~ 143 (451)
++........+....+ ++.+. ...++..+.+.++..++.++.|.++||+|||+.+..+.....++.+++++
T Consensus 16 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 88 (338)
T COG0477 16 LDLGLLSPALPLLLST-------LSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLAL 88 (338)
T ss_pred HhcchHHHHHHHHHHH-------cCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHh
Confidence 4455555556665554 44444 47899999999999999999999999999999988888776777777777
Q ss_pred hhh--HHHHHHHHHHHHHHHhhhhhhHHHHHHhccCC-CCcchHHHHHHH-HHHHHHHHHHHHhhhhccc-ccchhHHHh
Q 013044 144 APD--FIIMVVGRFVFGIGIGLAMHAAPMYIAETAPT-PMRGQLISLKEF-FIVLGMVGGYGIGSLLVDL-VAGWRYMYG 218 (451)
Q Consensus 144 ~~~--~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~~G~~~g~~l~~~l~~~-~~~wr~~f~ 218 (451)
..+ .+.+++.|+++|++.+...+...+++.|+.++ ++|+...+.... ...+|..+++.+++.+... ..+||+.|.
T Consensus 89 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (338)
T COG0477 89 APNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFL 168 (338)
T ss_pred CccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHH
Confidence 776 99999999999999999999999999999997 678999998888 6888999999887776653 227999666
Q ss_pred hhHHHHHH
Q 013044 219 ASTPLAVI 226 (451)
Q Consensus 219 ~~~~~~~~ 226 (451)
+.......
T Consensus 169 ~~~~~~~~ 176 (338)
T COG0477 169 LAALLGLL 176 (338)
T ss_pred HHHHHHHH
Confidence 66655544
|
|
| >PRK10133 L-fucose transporter; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.2e-08 Score=97.37 Aligned_cols=134 Identities=10% Similarity=-0.007 Sum_probs=110.8
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 168 (451)
+|.++.+.++....+.++..++.++.|++.||+|+|+++..+.++..++.++..+.++.+ -+..-++.|++.+..+|..
T Consensus 290 ~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg~~~i~P~~ 368 (438)
T PRK10133 290 PGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCSAFMSIQYPTI 368 (438)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHHHHHH
Confidence 699999999999999999999999999999999999999999888877777766666543 3456678999999999999
Q ss_pred HHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccc-hhHHHhhhHHHHHH
Q 013044 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAG-WRYMYGASTPLAVI 226 (451)
Q Consensus 169 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~-wr~~f~~~~~~~~~ 226 (451)
.+...|..++ +.+.+.++... ..+|..++|.+.+.+.+.. | -|..|++..+..+.
T Consensus 369 ~s~a~~~~~~-~~~~as~l~~~-~~~g~~~~~~i~G~l~~~~-g~~~~~~~v~~~~~~~ 424 (438)
T PRK10133 369 FSLGIKNLGQ-DTKYGSSFIVM-TIIGGGIVTPVMGFVSDAA-GNIPTAELIPALCFAV 424 (438)
T ss_pred HHHHHcccch-hhccchhHHhH-HhccchHHHHHHHHHHHhc-cchHHHHHHHHHHHHH
Confidence 9999998874 46777887765 4468888889999888876 6 78888766555444
|
|
| >TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily | Back alignment and domain information |
|---|
Probab=98.98 E-value=5e-09 Score=102.02 Aligned_cols=121 Identities=19% Similarity=0.265 Sum_probs=107.8
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHH----hhhHHHHHHHHHHHHHHHhhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL----APDFIIMVVGRFVFGIGIGLA 164 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~----~~~~~~l~~~r~l~G~~~~~~ 164 (451)
+|.++.+.++......++..++.++.|++.||+|||+++.++..+.+++..+..+ ..+++.++...++.|++.+..
T Consensus 286 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~ 365 (485)
T TIGR00711 286 LGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCF 365 (485)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 6889999999999999999999999999999999999999999988888887763 235677777889999999988
Q ss_pred hhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhccc
Q 013044 165 MHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL 209 (451)
Q Consensus 165 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~ 209 (451)
.+.......+..|+++|+.+.++.+....+|..+|+.+.+.+.++
T Consensus 366 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 366 FMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888889999999999999999999999999999988654
|
This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. |
| >PRK09669 putative symporter YagG; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=4.2e-08 Score=94.26 Aligned_cols=117 Identities=14% Similarity=0.202 Sum_probs=93.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHHHhhhhhhHHHH
Q 013044 94 VEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL--APDFIIMVVGRFVFGIGIGLAMHAAPMY 171 (451)
Q Consensus 94 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~--~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 171 (451)
...+.+.....+...++.+++++++||+|+|+.+..+.++.+++.+...+ .++.+.+++..++.|++.+...+...++
T Consensus 264 ~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am 343 (444)
T PRK09669 264 DLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSM 343 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666777888889999999999999999999888776654443333 3577778888899999999999999999
Q ss_pred HHhccC-------CCCcchHHHHHHHHHHHHHHHHHHHhhhhcccc
Q 013044 172 IAETAP-------TPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV 210 (451)
Q Consensus 172 i~~~~~-------~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~ 210 (451)
++|..+ .++.|...+.......+|..+|+.+++.+.+..
T Consensus 344 ~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~ 389 (444)
T PRK09669 344 FSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWV 389 (444)
T ss_pred HHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999885 223466788888899999999999999887643
|
|
| >COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.97 E-value=3.2e-09 Score=95.47 Aligned_cols=141 Identities=22% Similarity=0.207 Sum_probs=114.8
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhh--cchHHH-HHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADIL--GRRREL-ILAALLYLVGALVTALAP--DFIIMVVGRFVFGIGIGL 163 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~--Grr~~~-~~~~~l~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~ 163 (451)
.|.|..+.++..+.+-.+...|.+++|+++||+ |||... ++.+++..++.+..-+++ |++...++-++.|+..-+
T Consensus 283 k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyG 362 (448)
T COG2271 283 KGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYG 362 (448)
T ss_pred cCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhh
Confidence 588999999999999999999999999999996 676554 444444555555555555 458888888999998766
Q ss_pred hhhhHHHHHHhccCCCCcchHHHHHHHHHHH-HHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHH
Q 013044 164 AMHAAPMYIAETAPTPMRGQLISLKEFFIVL-GMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMG 230 (451)
Q Consensus 164 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~ 230 (451)
..-..-....|..|++--|.+.|+.+.+..+ |.+.+....+++.+.. ||...|++..+.+++..++
T Consensus 363 PqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~-gW~g~Fi~~~~~a~l~~ll 429 (448)
T COG2271 363 PQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTW-GWDGGFIVLSIAALLAILL 429 (448)
T ss_pred HHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecC-CCcchHHHHHHHHHHHHHH
Confidence 6667777789999999999999999998888 9999999999999986 9999999888877774433
|
|
| >TIGR00901 2A0125 AmpG-related permease | Back alignment and domain information |
|---|
Probab=98.97 E-value=4.3e-09 Score=98.05 Aligned_cols=105 Identities=15% Similarity=0.191 Sum_probs=91.0
Q ss_pred ccCCchhHHHHHHHHH-HHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHh-----------hhHHHHHHHHHH
Q 013044 89 YDLSSVEIGLITSGSL-YGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA-----------PDFIIMVVGRFV 156 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~-~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~-----------~~~~~l~~~r~l 156 (451)
+|.+..+.+.+.++.. ++..++.+++|++.||+|||+.+..+.++.+++..+..+. ++.+.++.+.++
T Consensus 239 ~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 318 (356)
T TIGR00901 239 MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITL 318 (356)
T ss_pred cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHH
Confidence 6889999998888766 6788999999999999999999999888888777765543 456778888999
Q ss_pred HHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHH
Q 013044 157 FGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIV 193 (451)
Q Consensus 157 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 193 (451)
.+++.+...+...+++.|.+|+++||+.+++.++..+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 319 EAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 9999999999999999999999999999999887654
|
|
| >PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1 | Back alignment and domain information |
|---|
Probab=98.96 E-value=4.9e-07 Score=84.33 Aligned_cols=330 Identities=12% Similarity=-0.019 Sum_probs=170.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHh--------h----hHHHHHHHH---HHHHHHH
Q 013044 97 GLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA--------P----DFIIMVVGR---FVFGIGI 161 (451)
Q Consensus 97 g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~--------~----~~~~l~~~r---~l~G~~~ 161 (451)
+...-.-.+..++..+..|.+.||..|.+++-.+++..-++..+++.. + +-+....+. .+.|.-.
T Consensus 41 siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~ 120 (432)
T PF06963_consen 41 SIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIE 120 (432)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHH
Confidence 333334456677888899999999999998877766654433333221 1 112222222 1222211
Q ss_pred hhh-hhhHHHHHHhcc------CCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHH-HHHHhhc
Q 013044 162 GLA-MHAAPMYIAETA------PTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI-MGMGMWW 233 (451)
Q Consensus 162 ~~~-~~~~~~~i~~~~------~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~-~~~~~~~ 233 (451)
-.. .....+.=.||. +++.+.+..+...-.--+.-+++|++.|.+.+.. +.+....+.++..++ ..+=+++
T Consensus 121 ~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~-s~~~~~~~i~~~N~~S~~vEy~~ 199 (432)
T PF06963_consen 121 RLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFA-SPVIAAIFIAGWNLASVFVEYFL 199 (432)
T ss_pred HHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 111222224554 2344556666666666778899999999998876 788877777777666 3332332
Q ss_pred c----cCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhcccchhHH
Q 013044 234 L----PASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKAL 309 (451)
Q Consensus 234 ~----~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (451)
+ ...|. +..++++++.+.....+ ........+....... ..-......|+.-++.+-+...
T Consensus 200 l~~VY~~~P~-L~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~----~~~~~~~~~w~~Y~~q~vflas 264 (432)
T PF06963_consen 200 LARVYNSVPA-LAVKKRSSESESSSDEE----------SSSESSSDPSILKRLW----NPLRTIIRGWRTYFRQPVFLAS 264 (432)
T ss_pred HHHHHHhChH-hcCCCCCcccccccccc----------ccccccchhhHHHHHH----HHHHHHhccHHHHHhCHHHHHH
Confidence 2 22222 21111111111100000 0000000000000000 0011123455666665433333
Q ss_pred HHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHH
Q 013044 310 IIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLF 389 (451)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 389 (451)
+-..++++- .+ .+...+..|+...|+ ++...+.+-....+.++.+.++..++.+|+|..+.-..+.....+++.
T Consensus 265 ~alalLY~T-VL----sf~~lmt~yl~~~G~-s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~ 338 (432)
T PF06963_consen 265 FALALLYFT-VL----SFGGLMTAYLKSQGY-SPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLA 338 (432)
T ss_pred HHHHHHHHH-Hh----cCcHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHH
Confidence 322222222 11 233445556677799 999999999999999999999999999999988777777666655554
Q ss_pred HHHHhhhccCCc-chH--HHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheeeee
Q 013044 390 LLGSYYLFLDDV-PAV--AVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCAKL 449 (451)
Q Consensus 390 ~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (451)
+....++..... ... ......+...=.|.= ++=....-+..|..|++.||+.+|+-+++
T Consensus 339 ~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW-~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl 400 (432)
T PF06963_consen 339 LCVVSFWAPGSPFSSISAYLLLGGIALSRIGLW-SFDLAVTQIMQENVPESERGAVSGVQNSL 400 (432)
T ss_pred HHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHH-hhhHHHHHhhcccCCHHHhhHHHHHHHHH
Confidence 443333332222 111 111111222222220 11223345678889999999998876543
|
It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane |
| >PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms | Back alignment and domain information |
|---|
Probab=98.95 E-value=3.7e-09 Score=98.21 Aligned_cols=112 Identities=31% Similarity=0.440 Sum_probs=99.9
Q ss_pred ccCC-chhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHhhh
Q 013044 89 YDLS-SVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA---PDFIIMVVGRFVFGIGIGLA 164 (451)
Q Consensus 89 ~~~s-~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~ 164 (451)
+|.+ ..+.+++.++..++..++.++.|++.||+|+|+..........++.+...+. ++....++.-++.|++.+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 316 (352)
T PF07690_consen 237 LGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIV 316 (352)
T ss_dssp HHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 7888 7999999999999999999999999999999888887777777776666554 34577777889999999999
Q ss_pred hhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHH
Q 013044 165 MHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGY 200 (451)
Q Consensus 165 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~ 200 (451)
.+...+++.|..|+++||++.++.+...++|..+||
T Consensus 317 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 317 FPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp CHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 999999999999999999999999999999999987
|
These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A. |
| >PRK10473 multidrug efflux system protein MdtL; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.1e-08 Score=96.65 Aligned_cols=129 Identities=16% Similarity=0.178 Sum_probs=91.1
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 168 (451)
+|.++.+.+.+.+...++..++.++.+++.||+|||+++.++..+..++.++..+.++.+..++.-.+.+.|.+...+..
T Consensus 234 ~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 313 (392)
T PRK10473 234 MGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSVGFGVA 313 (392)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 68888999999999999999999999999999999999999999999888888887666655555555555544444332
Q ss_pred HHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHH
Q 013044 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPL 223 (451)
Q Consensus 169 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~ 223 (451)
...+..|.++|+ +...+...++..+++.+++++.+.. ++.....+.+.+
T Consensus 314 --~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~-g~~~~~~~~~~~ 362 (392)
T PRK10473 314 --MSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVL-GISAWNMLIGIL 362 (392)
T ss_pred --HHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHH
Confidence 334455554443 3334445566667777777776655 666544444443
|
|
| >KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.94 E-value=3e-09 Score=93.49 Aligned_cols=132 Identities=17% Similarity=0.189 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcch
Q 013044 104 LYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQ 183 (451)
Q Consensus 104 ~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 183 (451)
.+...-|.++.+.+.||+|||+.+..+.++++++.++...+.+-..+.+.-+..-+...+.+.+.+.|..|.+|.+-|+.
T Consensus 391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRat 470 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRAT 470 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhc
Confidence 35566788999999999999999999999999999999887664444444444444445566678889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhhcccCch
Q 013044 184 LISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASP 238 (451)
Q Consensus 184 ~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~ 238 (451)
..|.-....-+|.++.|+++ ...+. +-..+..+.+.+.++..++..++|-.+
T Consensus 471 gvGtcSsmaRIggI~~p~iA-~~~e~--s~sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 471 GVGTCSSMARIGGIFSPVIA-MRAEL--STSLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred chhhhhhHHhhhhhhhhHHH-HHhcc--ceeehHHHHHHHHHHHHHHheeeeecc
Confidence 99999999999999999999 32222 445566667777777666666666443
|
|
| >PF13347 MFS_2: MFS/sugar transport protein | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.2e-08 Score=97.52 Aligned_cols=116 Identities=22% Similarity=0.259 Sum_probs=105.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHhhhhhhHHHH
Q 013044 94 VEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP--DFIIMVVGRFVFGIGIGLAMHAAPMY 171 (451)
Q Consensus 94 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~ 171 (451)
...+.+..+..++..++.+++++++||+|+|+++..+.++.+++.++..+.+ |.+.+++.-++.|++.+...+...++
T Consensus 260 ~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~ 339 (428)
T PF13347_consen 260 GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAM 339 (428)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccc
Confidence 5678888899999999999999999999999999999999999999998886 99999999999999999999999999
Q ss_pred HHhccCC-------CCcchHHHHHHHHHHHHHHHHHHHhhhhccc
Q 013044 172 IAETAPT-------PMRGQLISLKEFFIVLGMVGGYGIGSLLVDL 209 (451)
Q Consensus 172 i~~~~~~-------~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~ 209 (451)
++|..+. ++.|...+.......+|..+++.+.+.+.+.
T Consensus 340 ~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~ 384 (428)
T PF13347_consen 340 LADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLAL 384 (428)
T ss_pred cccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHH
Confidence 9999873 3458889999999999999999998887653
|
|
| >PRK14995 methyl viologen resistance protein SmvA; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.3e-08 Score=99.15 Aligned_cols=120 Identities=18% Similarity=0.092 Sum_probs=107.4
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHhhhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA---PDFIIMVVGRFVFGIGIGLAM 165 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~ 165 (451)
+|.++.+.|+....+.++..++.++.|++.||+|+|+++..+.++.+++.++.... ++.+...+..++.|+|.|...
T Consensus 290 ~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~ 369 (495)
T PRK14995 290 HGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASAL 369 (495)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHH
Confidence 58899999999999999999999999999999999999999998888877665542 456667778899999999999
Q ss_pred hhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcc
Q 013044 166 HAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD 208 (451)
Q Consensus 166 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~ 208 (451)
+.....+.+..|+++++.+.++.+....+|..+|+.+.+.+.+
T Consensus 370 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 370 LASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9899999999999999999999999999999999999998754
|
|
| >KOG3098 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.9e-07 Score=86.90 Aligned_cols=107 Identities=16% Similarity=0.124 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCC
Q 013044 100 TSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTP 179 (451)
Q Consensus 100 ~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 179 (451)
.++-+..+.+.+++.+.+.|+.|.|+.+.++........+...+ .|-+.++++-++.|+|.+..+...-.+++|..+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 77888889999999999999999999999999999888777766 55667888999999999999999999999999999
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHhhhhc
Q 013044 180 MRGQLISLKEFFIVLGMVGGYGIGSLLV 207 (451)
Q Consensus 180 ~r~~~~~~~~~~~~~G~~~g~~l~~~l~ 207 (451)
++.+..++..+....+.++|..+...+.
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l~~~~ 162 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIILFIYF 162 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhheeee
Confidence 9999999998888888888877666554
|
|
| >KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.89 E-value=2e-08 Score=85.16 Aligned_cols=123 Identities=18% Similarity=0.106 Sum_probs=98.6
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHH-HHHHHHHhhhHHHHHHHHHHHHHHHhhhhhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLV-GALVTALAPDFIIMVVGRFVFGIGIGLAMHA 167 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 167 (451)
||+|+...+.+.+.-..-.++.+++.|.++||+|++...+.+..+..+ +-....+ +++.=.++..+.|+.....-..
T Consensus 295 fGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~lGLsysllAcs 372 (459)
T KOG4686|consen 295 FGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTFLGLSYSLLACS 372 (459)
T ss_pred hCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHHHhhhHHHHHHH
Confidence 899999999999999999999999999999999999887766555433 3333332 3344455667788887766655
Q ss_pred HHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccch
Q 013044 168 APMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGW 213 (451)
Q Consensus 168 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~w 213 (451)
....++...|.++.|++.|..+...++|.++.|++++.+.++.+++
T Consensus 373 lWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y 418 (459)
T KOG4686|consen 373 LWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSY 418 (459)
T ss_pred HhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCch
Confidence 6667778888899999999999999999999999999999876333
|
|
| >KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.86 E-value=8.5e-08 Score=87.14 Aligned_cols=118 Identities=23% Similarity=0.338 Sum_probs=95.2
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhh----hcchHHHH-HHHHHHHHHHHHHHHhhhH----------------
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADI----LGRRRELI-LAALLYLVGALVTALAPDF---------------- 147 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr~~~~-~~~~l~~~~~~~~~~~~~~---------------- 147 (451)
+|++....+.+--+.-+...+.+++.|..+|| |||||.++ .+.++..++.++.+++.++
T Consensus 62 lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~ra 141 (498)
T KOG0637|consen 62 LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRA 141 (498)
T ss_pred cCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHH
Confidence 68888888888888888899999999999995 89877654 4666677777777776554
Q ss_pred -HHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcch-HHHHHHHHHHHHHHHHHHHhhhh
Q 013044 148 -IIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQ-LISLKEFFIVLGMVGGYGIGSLL 206 (451)
Q Consensus 148 -~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~-~~~~~~~~~~~G~~~g~~l~~~l 206 (451)
..++++--+.-++.......+-+++.|...+++|.+ +.+++....++|..+|..++++.
T Consensus 142 i~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 142 IVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred HHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccccc
Confidence 355566666677777888889999999997766666 99999999999999999988855
|
|
| >TIGR00903 2A0129 major facilitator 4 family protein | Back alignment and domain information |
|---|
Probab=98.84 E-value=6.4e-08 Score=90.06 Aligned_cols=142 Identities=19% Similarity=0.089 Sum_probs=98.0
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcc---hHHHHH-HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGR---RRELIL-AALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLA 164 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Gr---r~~~~~-~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 164 (451)
.+.+.. .+...++..+...++ .++++||.+| |+.... ..++.++...+.++.++....++.-.+.|++....
T Consensus 222 ~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 297 (368)
T TIGR00903 222 AGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPA 297 (368)
T ss_pred CCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhh
Confidence 355543 566655555555544 4677777654 343332 44444555555555555555555667777777777
Q ss_pred hhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhhcccCc
Q 013044 165 MHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPAS 237 (451)
Q Consensus 165 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~ 237 (451)
.+...++.+|.+|++.|+++.|+.+....+|..++|.+.+.+.. +-+..|.+.+++.++..+..+.++++
T Consensus 298 ~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~---~~~~~f~~~~~~~~i~~~~~~~~~~~ 367 (368)
T TIGR00903 298 YAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS---SAEAYFTFLAILITIAFAIALLLPND 367 (368)
T ss_pred HHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 78888999999999999999999999999999999999887763 67778888877777754444444543
|
This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix. |
| >COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.84 E-value=7.4e-09 Score=93.24 Aligned_cols=144 Identities=17% Similarity=0.101 Sum_probs=114.6
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhh-------hHHHHHHHHHHHHHHH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP-------DFIIMVVGRFVFGIGI 161 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~-------~~~~l~~~r~l~G~~~ 161 (451)
|++++.+.|.+...+.+...+..+.+|+++||+|.+|++.+......++..+.++.. +...++..-+..++..
T Consensus 249 fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~ 328 (417)
T COG2223 249 FGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFA 328 (417)
T ss_pred cCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHh
Confidence 799999999999999999999999999999999999999999998888888887753 3444444344444444
Q ss_pred hhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhhc
Q 013044 162 GLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW 233 (451)
Q Consensus 162 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~ 233 (451)
|.....+..++..+++ ++-|.+.|+..+..++|...-|..-+...+..+.++..|++.....+++.+..+.
T Consensus 329 G~GnGsvfk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~ 399 (417)
T COG2223 329 GLGNGSVFKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWA 399 (417)
T ss_pred ccCcchheeechHHHH-hhhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 4444455666667776 4779999999999999998888888888887756999999999888886665544
|
|
| >PRK11102 bicyclomycin/multidrug efflux system; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=6e-08 Score=91.15 Aligned_cols=116 Identities=17% Similarity=0.155 Sum_probs=86.9
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHH---H-hhhHHHHHHHHHHHHHHHhhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTA---L-APDFIIMVVGRFVFGIGIGLA 164 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~---~-~~~~~~l~~~r~l~G~~~~~~ 164 (451)
+|.++.+.|++.+...++..++.++.|++.||+|||+.+..+..+..+..+... . ..+++.+.++-.+.+.+.+..
T Consensus 225 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (377)
T PRK11102 225 NGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMI 304 (377)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh
Confidence 688999999999999999999999999999999999999888876544333222 2 234555555555666666666
Q ss_pred hhhHHHHHHhccCCCCcchHHHHHHH-HHHHHHHHHHHHhhh
Q 013044 165 MHAAPMYIAETAPTPMRGQLISLKEF-FIVLGMVGGYGIGSL 205 (451)
Q Consensus 165 ~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~~g~~l~~~ 205 (451)
......++.|..| ++++++.++... ...+|..+++++++.
T Consensus 305 ~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~~ 345 (377)
T PRK11102 305 SSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSLA 345 (377)
T ss_pred hHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 6667777788766 789999988755 356777777777654
|
|
| >TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial | Back alignment and domain information |
|---|
Probab=98.83 E-value=7.1e-08 Score=93.07 Aligned_cols=136 Identities=15% Similarity=0.120 Sum_probs=111.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhh----hhhh-hcchHHH--HHHHHHHHHHHHHHHH---------hhhHHHHHHHHHHHHH
Q 013044 96 IGLITSGSLYGALIGSILAFN----IADI-LGRRREL--ILAALLYLVGALVTAL---------APDFIIMVVGRFVFGI 159 (451)
Q Consensus 96 ~g~~~s~~~~~~~~~~~~~g~----l~dr-~Grr~~~--~~~~~l~~~~~~~~~~---------~~~~~~l~~~r~l~G~ 159 (451)
.+++.+...+...+.+++..+ +.|| .+.+... .+|.++.+++.+..++ ..|++++++..++.|+
T Consensus 314 ~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ 393 (475)
T TIGR00924 314 VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTL 393 (475)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 678888888888888887554 4444 2233333 7788888888888775 4689999999999999
Q ss_pred HHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhh
Q 013044 160 GIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMW 232 (451)
Q Consensus 160 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~ 232 (451)
|.....|...+++++..|++.||+++|++.....+|..+++.+.....+.. +|.+.|...++..++..+..+
T Consensus 394 ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 465 (475)
T TIGR00924 394 GELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQ-GVTGVFGKIGLVTLLVGVVMA 465 (475)
T ss_pred HHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-chhhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999988876665 799888888877776444433
|
The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists. |
| >PRK11043 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.2e-07 Score=89.78 Aligned_cols=120 Identities=16% Similarity=0.133 Sum_probs=96.1
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHH---H--hhhHHHHHHHHHHHHHHHhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTA---L--APDFIIMVVGRFVFGIGIGL 163 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~---~--~~~~~~l~~~r~l~G~~~~~ 163 (451)
+|.++.+.|+....+.++..++.++.+++.||+|+|+.+....++.+++.+... . .++.+.+++...+.|++.+.
T Consensus 233 ~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (401)
T PRK11043 233 MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGA 312 (401)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHH
Confidence 688999999988888899999999999999999999977666555544433322 2 34566666777888999999
Q ss_pred hhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhccc
Q 013044 164 AMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL 209 (451)
Q Consensus 164 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~ 209 (451)
..+...+...|..| ++|+++.++.+.....+...++.+.+.+.+.
T Consensus 313 ~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 313 IYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIST 357 (401)
T ss_pred HHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 99988888878776 6899999999998888888888888888664
|
|
| >TIGR00788 fbt folate/biopterin transporter | Back alignment and domain information |
|---|
Probab=98.80 E-value=6.6e-08 Score=93.05 Aligned_cols=147 Identities=15% Similarity=0.120 Sum_probs=119.8
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHh----------hhHHHHHHHHHHHH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA----------PDFIIMVVGRFVFG 158 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~----------~~~~~l~~~r~l~G 158 (451)
+|.++.+.|++.....++..++....+++.+|++.|+++.++.++.+++.+..... ++.+.++..-++.+
T Consensus 283 lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~ 362 (468)
T TIGR00788 283 LPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAE 362 (468)
T ss_pred CCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHH
Confidence 79999999999999999999999999999999999999999999999988665321 34445666678999
Q ss_pred HHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccc-----hhHHHhhhH---HHHHHHHHH
Q 013044 159 IGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAG-----WRYMYGAST---PLAVIMGMG 230 (451)
Q Consensus 159 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~-----wr~~f~~~~---~~~~~~~~~ 230 (451)
++.+........++.+..|++++|...++..+..++|..+++.+++.+.+.. | ++..+.... +..++.+..
T Consensus 363 ~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~-g~~~~~~~~~~~~i~i~~~~~l~~l~~ 441 (468)
T TIGR00788 363 VLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETI-GITCDNSNNLWLLILGHSLAPLLPLPL 441 (468)
T ss_pred HHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCcccccchHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999988755 4 444433332 233333334
Q ss_pred hhcccC
Q 013044 231 MWWLPA 236 (451)
Q Consensus 231 ~~~~~e 236 (451)
.+++|+
T Consensus 442 ~~llP~ 447 (468)
T TIGR00788 442 LHLLPR 447 (468)
T ss_pred HHhCCC
Confidence 446775
|
The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity. |
| >TIGR00769 AAA ADP/ATP carrier protein family | Back alignment and domain information |
|---|
Probab=98.80 E-value=4.4e-06 Score=78.98 Aligned_cols=116 Identities=5% Similarity=-0.055 Sum_probs=90.8
Q ss_pred CchhHHHHHHHHHHHHHHH-HHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHh----h---------------------
Q 013044 92 SSVEIGLITSGSLYGALIG-SILAFNIADILGRRRELILAALLYLVGALVTALA----P--------------------- 145 (451)
Q Consensus 92 s~~~~g~~~s~~~~~~~~~-~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~----~--------------------- 145 (451)
+.+.+.++-+...+..++. .++.+++++|++|++++-+....+....+++++. +
T Consensus 41 gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~ 120 (472)
T TIGR00769 41 GAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFM 120 (472)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhH
Confidence 4468899999887777666 8999999999999999988777777777776654 1
Q ss_pred ------hHHHHHHHHHHHHHHHhhhhh-hHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhc
Q 013044 146 ------DFIIMVVGRFVFGIGIGLAMH-AAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLV 207 (451)
Q Consensus 146 ------~~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~ 207 (451)
+.|...+..+...+-...... .-..+++|.++.++-.|..+++..+.++|.++++.+..++.
T Consensus 121 ~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 121 GFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123333444445554444554 67788999999999999999999999999999999988876
|
These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers. |
| >KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.1e-08 Score=91.02 Aligned_cols=156 Identities=19% Similarity=0.132 Sum_probs=123.5
Q ss_pred ccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhc--chHHHHHHHHHHHHHHHHHHH
Q 013044 66 YDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILG--RRRELILAALLYLVGALVTAL 143 (451)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G--rr~~~~~~~~l~~~~~~~~~~ 143 (451)
......-|.++..+.|. +..+..++|+..--..+.+.++..+.|.++||++ |-.....++++.++.+....+
T Consensus 284 ~~lafLePtlslwm~e~------m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~ 357 (464)
T KOG3764|consen 284 SSLAFLEPTLSLWMLET------MFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPF 357 (464)
T ss_pred chHHHhCcccHHHHHHh------ccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHh
Confidence 34445555555533321 4545558888888888999999999999999999 555556677777777778889
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCC------CcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHH
Q 013044 144 APDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTP------MRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMY 217 (451)
Q Consensus 144 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~------~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f 217 (451)
++++.++++-++..|++.+..............+.+ -.|...++...++++|.++||.+++.+.+.. |++|.-
T Consensus 358 ~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~i-GF~wl~ 436 (464)
T KOG3764|consen 358 ATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAI-GFEWLM 436 (464)
T ss_pred hhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeeh-hHHHHH
Confidence 999999999999999988887777666666666543 3478889999999999999999999999998 999999
Q ss_pred hhhHHHHHHHH
Q 013044 218 GASTPLAVIMG 228 (451)
Q Consensus 218 ~~~~~~~~~~~ 228 (451)
.+.++..++-.
T Consensus 437 ~iig~~n~iya 447 (464)
T KOG3764|consen 437 TIIGILNLIYA 447 (464)
T ss_pred HHHHHHHHHHH
Confidence 99888888733
|
|
| >COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.5e-07 Score=83.14 Aligned_cols=177 Identities=24% Similarity=0.176 Sum_probs=134.1
Q ss_pred CccchHHHHHHHHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhh-c
Q 013044 44 NYSVSAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADIL-G 122 (451)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-G 122 (451)
-|+.+.-|.+.+.+.+-++.+.....+ +|.+..| -|+|..+.|++.+...+.....++....+.+|. .
T Consensus 204 vw~~~~aW~vtLfmGlqS~~~Y~~~~W----LP~ili~-------~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n 272 (395)
T COG2807 204 VWRSPLAWQVTLFMGLQSLLYYIVIGW----LPAILID-------RGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKN 272 (395)
T ss_pred cccCchhHHHHHHHHhhHHHHHHHHHH----HHHHHHH-------cCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 344444555545444444444433333 6777666 699999999999999999999999999999965 5
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCC-CcchHHHHHHHHHHHHHHHHHH
Q 013044 123 RRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTP-MRGQLISLKEFFIVLGMVGGYG 201 (451)
Q Consensus 123 rr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~-~r~~~~~~~~~~~~~G~~~g~~ 201 (451)
+|+..+....++.+|.+.+.+.+.-..+.- -++.|+|.|..++.+.+++.+..+.. +-++..++.+....+=.+.||.
T Consensus 273 ~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~ 351 (395)
T COG2807 273 QRPLVVLALLLMLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPW 351 (395)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhh
Confidence 777778888888888877777655333222 48999999999999999999988654 4466667777777777889999
Q ss_pred HhhhhcccccchhHHHhhhHHHHHHHHHHhh
Q 013044 202 IGSLLVDLVAGWRYMYGASTPLAVIMGMGMW 232 (451)
Q Consensus 202 l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~ 232 (451)
+.|++-|..++|+...+......++..+.-+
T Consensus 352 l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl 382 (395)
T COG2807 352 LFGFLHDATGSWSAPLVLLALATLLMLIFGL 382 (395)
T ss_pred hHhHHHHhcCChHHHHHHHHHHHHHHHHHHh
Confidence 9999999888999999988888777544433
|
|
| >PRK15034 nitrate/nitrite transport protein NarU; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=9.5e-08 Score=90.07 Aligned_cols=135 Identities=10% Similarity=-0.007 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHH-Hh-----hhHHHHHHHHHHHHHHHhhhhhhHHHHH
Q 013044 99 ITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTA-LA-----PDFIIMVVGRFVFGIGIGLAMHAAPMYI 172 (451)
Q Consensus 99 ~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~-~~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~i 172 (451)
...+..+...+..+++|+++||+|+|+++.++.++..++..... .. .+++.+.+.-+...++.|........++
T Consensus 291 ~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~i 370 (462)
T PRK15034 291 LAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMI 370 (462)
T ss_pred HHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhh
Confidence 34455677888999999999999999999998887777664322 22 2466666666555555665566667777
Q ss_pred HhccCC---------------------CCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHh
Q 013044 173 AETAPT---------------------PMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGM 231 (451)
Q Consensus 173 ~~~~~~---------------------~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~ 231 (451)
.+++|+ ++-|.+.|+..+...+|..+-|.+-+...+..+++...|++..+..+++.++.
T Consensus 371 p~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~ 450 (462)
T PRK15034 371 AVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLT 450 (462)
T ss_pred HHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHH
Confidence 777763 14567888899999998889997777777665679999998888888855554
Q ss_pred hc
Q 013044 232 WW 233 (451)
Q Consensus 232 ~~ 233 (451)
|.
T Consensus 451 w~ 452 (462)
T PRK15034 451 WL 452 (462)
T ss_pred HH
Confidence 44
|
|
| >PRK09584 tppB putative tripeptide transporter permease; Reviewed | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.5e-07 Score=89.91 Aligned_cols=135 Identities=11% Similarity=0.052 Sum_probs=103.8
Q ss_pred HHHHHHHHHHHHHHHHHHH----hhhhhhhcchHHHHHHHHHHHHHHHHHHHhhh---------HHHHHHHHHHHHHHHh
Q 013044 96 IGLITSGSLYGALIGSILA----FNIADILGRRRELILAALLYLVGALVTALAPD---------FIIMVVGRFVFGIGIG 162 (451)
Q Consensus 96 ~g~~~s~~~~~~~~~~~~~----g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~---------~~~l~~~r~l~G~~~~ 162 (451)
.+++.++..+...+..++. +++.||++.++.+.+|.++.+++.+..++.++ .++++..+++.|+|++
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~ 397 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGEL 397 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 4555666665555555555 67777777778899999999999999877765 4689999999999999
Q ss_pred hhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcc---------cccchhHHHhhhHHHHHHHHHH
Q 013044 163 LAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD---------LVAGWRYMYGASTPLAVIMGMG 230 (451)
Q Consensus 163 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~---------~~~~wr~~f~~~~~~~~~~~~~ 230 (451)
...|...+++.+..|++.||+++|++.....+|..++..+...... ...+..+.|...++.+++..++
T Consensus 398 ~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~ 474 (500)
T PRK09584 398 MISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVL 474 (500)
T ss_pred HHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988888888777776653221 1113678888777776654333
|
|
| >KOG3762 consensus Predicted transporter [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.2e-08 Score=94.18 Aligned_cols=144 Identities=17% Similarity=0.155 Sum_probs=132.1
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 168 (451)
++..+...|........+-++.-++.+++..|+|+-+++.+++.+.++=.+..++.+|.|..+-..+++|+..+..+.++
T Consensus 401 ~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~ 480 (618)
T KOG3762|consen 401 LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAI 480 (618)
T ss_pred cCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHH
Confidence 67778888888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCcchHHHHHH-HHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhhc
Q 013044 169 PMYIAETAPTPMRGQLISLKE-FFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW 233 (451)
Q Consensus 169 ~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~ 233 (451)
.+|++...||+-|..+.++.+ ...++|--+|.++||.+.+.+ +=|..|.+.++.+++.++....
T Consensus 481 ~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~f-g~~ttf~~~giAcl~~l~~~~~ 545 (618)
T KOG3762|consen 481 ISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERF-GARTTFRIFGIACLVTLALFIS 545 (618)
T ss_pred HHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheee-hhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999984 577899999999999999998 8999999999888885554443
|
|
| >COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.68 E-value=2.3e-06 Score=79.81 Aligned_cols=120 Identities=25% Similarity=0.328 Sum_probs=102.6
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHhhhhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP--DFIIMVVGRFVFGIGIGLAMH 166 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~ 166 (451)
+|.++....+.......+..++.+++.++++|+|+|+++.++.++..++.++.-+.+ +.+.+++..++.++|.+...+
T Consensus 267 lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~ 346 (467)
T COG2211 267 LGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANP 346 (467)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhcccc
Confidence 455667777888888888888899999999999999999999999999999998875 788899999999999999999
Q ss_pred hHHHHHHhccC-------CCCcchHHHHHHHHHHHHHHHHHHHhhhhcc
Q 013044 167 AAPMYIAETAP-------TPMRGQLISLKEFFIVLGMVGGYGIGSLLVD 208 (451)
Q Consensus 167 ~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~ 208 (451)
...++++|..+ .++-|...+......=+|.+++..+.++...
T Consensus 347 l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~ 395 (467)
T COG2211 347 LPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILG 395 (467)
T ss_pred ccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988775 2333777788888888888888888777664
|
|
| >TIGR00885 fucP L-fucose:H+ symporter permease | Back alignment and domain information |
|---|
Probab=98.67 E-value=4.8e-07 Score=85.68 Aligned_cols=133 Identities=8% Similarity=-0.038 Sum_probs=103.0
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHH
Q 013044 90 DLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAP 169 (451)
Q Consensus 90 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 169 (451)
+.+....+...+.+..+..++.++.+++.||+++|+++.++..+..+..++..+.++... ..+-++.|++.+..+|...
T Consensus 265 ~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~-~~~l~~~glf~s~~fp~i~ 343 (410)
T TIGR00885 265 GMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVG-LYCLTLCSAFMSLMFPTIY 343 (410)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHH-HHHHHHHHHHHHHHHHHHH
Confidence 344455566677777888999999999999999999999999999999888888777544 5677888899999999999
Q ss_pred HHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccc-----cchhHHHhhhHHHHH
Q 013044 170 MYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV-----AGWRYMYGASTPLAV 225 (451)
Q Consensus 170 ~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~-----~~wr~~f~~~~~~~~ 225 (451)
+...+..+++.+ ...+...++ .+|.++.|++.|.+.|.. ++.+..|++..+.-+
T Consensus 344 sl~~~~~g~~~~-~~s~~l~~~-~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~ 402 (410)
T TIGR00885 344 GIALKGLGQDTK-YGAAGLVMA-IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFA 402 (410)
T ss_pred HHHHhhhhhhhh-hhHHHHHHH-HhccchHHHHHHHHHHHhcccccCccchHHHHHHHHHH
Confidence 999999986554 333333333 399999999999999842 247777776554433
|
This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector. |
| >PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon | Back alignment and domain information |
|---|
Probab=98.65 E-value=3.2e-06 Score=76.78 Aligned_cols=142 Identities=20% Similarity=0.200 Sum_probs=120.1
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhh-hhcchHHHHHHHHHHHHHHHHHHH---hhhHHHHHHHHHHHHHHHhhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIAD-ILGRRRELILAALLYLVGALVTAL---APDFIIMVVGRFVFGIGIGLA 164 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d-r~Grr~~~~~~~~l~~~~~~~~~~---~~~~~~l~~~r~l~G~~~~~~ 164 (451)
||.+..+..-+++.+..|..++....|++.. |.++|+.-.+++.+..++..+..+ ..+.+.+..+-++.|++.|..
T Consensus 239 fgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f 318 (403)
T PF03209_consen 239 FGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLF 318 (403)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHH
Confidence 8999999999999999999999999999887 678888888888887777666544 467899999999999999999
Q ss_pred hhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhccc---------ccchhHHHhhhHHHHHHHHHH
Q 013044 165 MHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL---------VAGWRYMYGASTPLAVIMGMG 230 (451)
Q Consensus 165 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~---------~~~wr~~f~~~~~~~~~~~~~ 230 (451)
.....+...|...+++.|..+|.++....++..++..+++.+.|. ..+|-.+|.+.++..++.+.+
T Consensus 319 ~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~l 393 (403)
T PF03209_consen 319 TVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVL 393 (403)
T ss_pred HHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999987652 124666677766666554433
|
It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase. |
| >PRK11462 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=2.2e-06 Score=82.43 Aligned_cols=116 Identities=22% Similarity=0.193 Sum_probs=81.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHhhhhhhHHHH
Q 013044 94 VEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP--DFIIMVVGRFVFGIGIGLAMHAAPMY 171 (451)
Q Consensus 94 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~ 171 (451)
...+.+.+.+.++..++.+++++++||+|+|+++..+..+.++..++..+.+ +...+++.-++.|++.+...+...++
T Consensus 263 ~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m 342 (460)
T PRK11462 263 EVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVM 342 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456677888889999999999999999999988765555444344433332 23344555567788887777777778
Q ss_pred HHhccC-------CCCcchHHHHHHHHHHHHHHHHHHHhhhhccc
Q 013044 172 IAETAP-------TPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL 209 (451)
Q Consensus 172 i~~~~~-------~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~ 209 (451)
++|..+ .++.|..++......-+|..+++.+++.+.+.
T Consensus 343 ~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~ 387 (460)
T PRK11462 343 MSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAY 387 (460)
T ss_pred HHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887766 23335556777788888888888888877643
|
|
| >PRK11652 emrD multidrug resistance protein D; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=2.6e-06 Score=80.53 Aligned_cols=120 Identities=15% Similarity=0.089 Sum_probs=93.8
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHH-HHHHHHHH--hhhHHHHHHHHHHHHHHHhhhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYL-VGALVTAL--APDFIIMVVGRFVFGIGIGLAM 165 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~-~~~~~~~~--~~~~~~l~~~r~l~G~~~~~~~ 165 (451)
+|.++.+.+++.....++..++.++.+++.||+|++........+.. +....... ..+.+.++++.++.|++.+...
T Consensus 238 ~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 317 (394)
T PRK11652 238 LGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLF 317 (394)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHH
Confidence 67888999999999999999999999999999984433322222222 22222222 2356778888899999999999
Q ss_pred hhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhccc
Q 013044 166 HAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL 209 (451)
Q Consensus 166 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~ 209 (451)
+...++..|..| ++++...++.+...++|..+++.+++.+.+.
T Consensus 318 ~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 318 PLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred HHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 999999999887 6789999999999999999999999988654
|
|
| >PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.2e-07 Score=65.75 Aligned_cols=81 Identities=22% Similarity=0.234 Sum_probs=73.7
Q ss_pred hcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHH
Q 013044 64 YGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL 143 (451)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~ 143 (451)
.|..+..+.|.+|.+.+| .++|.++.|++.+..++||.+|.+...++.++..+++.+..+.+...+..+.+++
T Consensus 4 mGigRFayTplLP~M~~~-------~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~ 76 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQAD-------GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMAL 76 (85)
T ss_pred hhhHHHHHHhHhHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 355666788999999998 8999999999999999999999999999999988999999999999999999999
Q ss_pred hhhHHHHH
Q 013044 144 APDFIIMV 151 (451)
Q Consensus 144 ~~~~~~l~ 151 (451)
.++++.+.
T Consensus 77 ~~~~~~w~ 84 (85)
T PF06779_consen 77 THSFWLWS 84 (85)
T ss_pred HhchHHHh
Confidence 98877653
|
Note that many members are hypothetical proteins. |
| >PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age | Back alignment and domain information |
|---|
Probab=98.55 E-value=2.1e-06 Score=78.70 Aligned_cols=134 Identities=14% Similarity=0.055 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhc
Q 013044 96 IGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAET 175 (451)
Q Consensus 96 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 175 (451)
.+.+.-+..+...+..+.+.+..+|+..+.=+.++.+++.+|.++.++++|.+.=+++-++.+++.|........+.. .
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~ 139 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-F 139 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-h
Confidence 344555556667777777888889887665566777788999999999999999999999999999998888888754 5
Q ss_pred cCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhhcc
Q 013044 176 APTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWL 234 (451)
Q Consensus 176 ~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 234 (451)
+++ ..++-+.++.+.+.++|+..-..+.+.-.+-|..+.+...+.++..+.++++
T Consensus 140 y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~~ 194 (402)
T PF02487_consen 140 YGK----SSLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFFL 194 (402)
T ss_pred cCc----cccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 553 3567788888888888887766665521144777777777666655544443
|
The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane |
| >PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans | Back alignment and domain information |
|---|
Probab=98.54 E-value=2.8e-06 Score=67.45 Aligned_cols=115 Identities=16% Similarity=0.106 Sum_probs=96.6
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHH
Q 013044 92 SSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMY 171 (451)
Q Consensus 92 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 171 (451)
++..--.-.++.+....+.+++.+.+.+++|.|+.++++.+...+-.... +-++.+.++.+-++.|++.+..++....+
T Consensus 35 ~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~y 113 (156)
T PF05978_consen 35 SAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTY 113 (156)
T ss_pred cccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHH
Confidence 33333345566777788888899999999999999999999988655544 45778899999999999999999999999
Q ss_pred HHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhc
Q 013044 172 IAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLV 207 (451)
Q Consensus 172 i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~ 207 (451)
+.+..++++|++..+++......+.++|.++...+.
T Consensus 114 lt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 114 LTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred HHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998888888888887776654
|
UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein []. |
| >KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.54 E-value=2e-07 Score=84.77 Aligned_cols=177 Identities=14% Similarity=0.042 Sum_probs=122.7
Q ss_pred HHHHHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHH--------HHHH-HHHHHHHHHHHHhhhhhhhc
Q 013044 52 LPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGL--------ITSG-SLYGALIGSILAFNIADILG 122 (451)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~--------~~s~-~~~~~~~~~~~~g~l~dr~G 122 (451)
..++..+..+|+.-......+..+..+.+. .+..+.+... ...+ -..++..+-.+...+.|+.|
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~-------ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iG 376 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSA-------IGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIG 376 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHh-------hccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhh
Confidence 344555666666555444444444444443 3333332222 1111 12233335556677899999
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhh----H----HHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHH
Q 013044 123 RRRELILAALLYLVGALVTALAPD----F----IIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVL 194 (451)
Q Consensus 123 rr~~~~~~~~l~~~~~~~~~~~~~----~----~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~ 194 (451)
||+..+.+.+++++..+..+...| - ..+.+..++.-+| -......+-+|.+|.+-|+..-|+..+..-+
T Consensus 377 Rk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFG---Pn~ttfivpaE~FParvR~t~hGIsAA~GK~ 453 (538)
T KOG0252|consen 377 RKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFG---PNATTFIVPAEIFPARVRSTCHGISAASGKA 453 (538)
T ss_pred hHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcC---CCceeEEeehhhchHHHhhhhhhHHHHhccc
Confidence 999999999999999999988766 1 2222333333333 3334455669999999999999999999999
Q ss_pred HHHHHHHHhhhhcc-----cccchhHHHhhhHHHHHHHHHHhhcccCchH
Q 013044 195 GMVGGYGIGSLLVD-----LVAGWRYMYGASTPLAVIMGMGMWWLPASPR 239 (451)
Q Consensus 195 G~~~g~~l~~~l~~-----~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~ 239 (451)
|.++|...-.++.+ .. +.|+.|++.+.++++..+..+++||+..
T Consensus 454 GAivg~~~F~~~t~~~yp~~~-g~~~v~~i~~~~~~~gi~~T~l~pEtk~ 502 (538)
T KOG0252|consen 454 GAIVGAFGFLYLTDHNYPPNI-GVRNVFIILAGCMLLGILFTLLIPETKG 502 (538)
T ss_pred hHHHHHHHhhHhhhccCCccc-cchHHHHHHHHHHHHhHheeEEeecccc
Confidence 99999999999888 55 8999999999999998888888998854
|
|
| >KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.46 E-value=3.9e-07 Score=86.51 Aligned_cols=173 Identities=12% Similarity=0.066 Sum_probs=114.5
Q ss_pred HHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcc---------hH
Q 013044 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGR---------RR 125 (451)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Gr---------r~ 125 (451)
.++.++.+...+....+...+|...++. ++.+-.+.|++.++..+...+..+++|.++||.-+ |-
T Consensus 261 wai~~~~f~~~~~~~~l~~y~PtY~~~V------L~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rki 334 (466)
T KOG2532|consen 261 WAIWISAFGGNWGFYLLLTYLPTYLKEV------LGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKI 334 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHH------hCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHH
Confidence 3444555555556666666677765531 68889999999999999999999999999998754 33
Q ss_pred HHHHHHHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHhh-hhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHh
Q 013044 126 ELILAALLYLVGALVTALAPD-FIIMVVGRFVFGIGIGL-AMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIG 203 (451)
Q Consensus 126 ~~~~~~~l~~~~~~~~~~~~~-~~~l~~~r~l~G~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~ 203 (451)
.-.++....+++.+..++.++ .....+.-...+.+..+ .......-..|. .+++-+..+|+.+....+..+++|.+.
T Consensus 335 fn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~-apq~a~~l~g~~~~~~~~~~~~~P~~v 413 (466)
T KOG2532|consen 335 FNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDI-APQHAGFVMGIINFVGALAGFIAPLLV 413 (466)
T ss_pred HHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHhe
Confidence 334455555555666666553 11111111222222222 222222222333 447789999999999999999999999
Q ss_pred hhhcc--cccchhHHHhhhHHHHHHHHHHhhcc
Q 013044 204 SLLVD--LVAGWRYMYGASTPLAVIMGMGMWWL 234 (451)
Q Consensus 204 ~~l~~--~~~~wr~~f~~~~~~~~~~~~~~~~~ 234 (451)
+.+.+ ....||++|++.+++.++..+.+.++
T Consensus 414 g~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 414 GIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred eeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 99984 12389999999999988855444443
|
|
| >TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) | Back alignment and domain information |
|---|
Probab=98.46 E-value=3.2e-07 Score=85.84 Aligned_cols=106 Identities=21% Similarity=0.187 Sum_probs=82.8
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHh--h--hHHHHHHHHHHHHHHHhhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA--P--DFIIMVVGRFVFGIGIGLA 164 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~--~--~~~~l~~~r~l~G~~~~~~ 164 (451)
+|.++.+.+++.++..+...++.+++|+++||+|||+.+..+..+...+..+..+. . +.+.+++.-.+.+++.|..
T Consensus 256 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 335 (366)
T TIGR00886 256 FGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAG 335 (366)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccc
Confidence 68889999999999999999999999999999999988888777766666555542 2 5655555556666666666
Q ss_pred hhhHHHHHHhccCCCCcchHHHHHHHHHHHH
Q 013044 165 MHAAPMYIAETAPTPMRGQLISLKEFFIVLG 195 (451)
Q Consensus 165 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G 195 (451)
......++.+..| +++|.+.|+.+...++|
T Consensus 336 ~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 336 NGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred cchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 6667777888877 68999999988766554
|
|
| >KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.44 E-value=3.5e-06 Score=71.19 Aligned_cols=301 Identities=18% Similarity=0.207 Sum_probs=160.3
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 168 (451)
++....++|.+.-+.+-..++...+.|.++||-|||+.-+.-++...++++ .-.++.|-.++++|++-|++.+..+..-
T Consensus 67 YgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhSpqYkVLmVGR~LGGiaTsLLFSaF 145 (454)
T KOG4332|consen 67 YGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHSPQYKVLMVGRVLGGIATSLLFSAF 145 (454)
T ss_pred cCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcCCceEEEeehhhhhhHHHHHHHHHH
Confidence 788889999988888888899999999999999999974444333333322 2346889999999999999999888877
Q ss_pred HHH-HHhccCCCCcchHHHHHHH----HHHHHHHHHHHHhhh----hcccc-cchhHHHhhhHHHHHH-HHHHhhcccCc
Q 013044 169 PMY-IAETAPTPMRGQLISLKEF----FIVLGMVGGYGIGSL----LVDLV-AGWRYMYGASTPLAVI-MGMGMWWLPAS 237 (451)
Q Consensus 169 ~~~-i~~~~~~~~r~~~~~~~~~----~~~~G~~~g~~l~~~----l~~~~-~~wr~~f~~~~~~~~~-~~~~~~~~~e~ 237 (451)
.++ ++|.-+ +|+.-.-+... +.-+|.-+-.+++|. +.+.. .|--.+|-..+.+..+ ..+..---.|.
T Consensus 146 EsWliaEHne--kr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil~~W~EN 223 (454)
T KOG4332|consen 146 ESWLIAEHNE--KRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVILSSWSEN 223 (454)
T ss_pred HHHHHHHhhh--ccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHhhhhhc
Confidence 765 466653 34333222222 122333333344443 33321 1333444433332222 11111000010
Q ss_pred hHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhcccchhHHHHHHHHHH
Q 013044 238 PRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVL 317 (451)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (451)
...+.+.++... +-+...+.+..+ +++.+...+..
T Consensus 224 -----------------------------------ygdps~~kdllt-------qf~gaa~aiaSD---~ki~LLG~iqs 258 (454)
T KOG4332|consen 224 -----------------------------------YGDPSENKDLLT-------QFKGAARAIASD---EKIALLGAIQS 258 (454)
T ss_pred -----------------------------------cCChhhhHHHHH-------HhhHhHHHHhcc---hHHHHHHHHHH
Confidence 000000000000 001112223333 33333333444
Q ss_pred HHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCc--hhhhchhHHHHHHHHHHHHhh
Q 013044 318 FQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRR--PLLLGGVSGIVISLFLLGSYY 395 (451)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~--~~~~~~~~~~~~~~~~~~~~~ 395 (451)
.+....+..+..|.|.+--+ - ...--|.+...+....++|+-+..++..|-..| ..+.+.+.+..+.+.+.....
T Consensus 259 LFE~smytFVFLWTPaLspn--~-e~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~ 335 (454)
T KOG4332|consen 259 LFEGSMYTFVFLWTPALSPN--D-EEIPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTS 335 (454)
T ss_pred HHhhhhheeeeeecccCCCC--c-ccCCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHh
Confidence 44433344455566643211 1 123457778888888888888887776654433 333444444444333332222
Q ss_pred hc--cCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhh
Q 013044 396 LF--LDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCS 443 (451)
Q Consensus 396 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (451)
.. ....+...++..+++-.+.++ +.|...-+=.+..|++.|++.+
T Consensus 336 ~vsP~kes~~~s~i~F~~~E~cvGl---fwPSimkmRsqyIPEearstim 382 (454)
T KOG4332|consen 336 SVSPSKESPSESLIGFCLFEACVGL---FWPSIMKMRSQYIPEEARSTIM 382 (454)
T ss_pred ccCCCcCCchHHHHHHHHHHHHHhh---cchHHHHHHHhhCCHHHHhhhh
Confidence 11 122344556677777788887 5666566666777888887654
|
|
| >PRK10207 dipeptide/tripeptide permease B; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=3.6e-06 Score=81.43 Aligned_cols=137 Identities=14% Similarity=0.133 Sum_probs=105.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhcchHH-------HHHHHHHHHHHHHHHH-----Hh-----hhHHHHHHHHHHHH
Q 013044 96 IGLITSGSLYGALIGSILAFNIADILGRRRE-------LILAALLYLVGALVTA-----LA-----PDFIIMVVGRFVFG 158 (451)
Q Consensus 96 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~-------~~~~~~l~~~~~~~~~-----~~-----~~~~~l~~~r~l~G 158 (451)
.+++.+...+...+..++.+++.||+|+|+. +.+|.++.+++.+..+ ++ .++++++..-++.|
T Consensus 311 ~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g 390 (489)
T PRK10207 311 PVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQS 390 (489)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHH
Confidence 3566667777788899999999999999973 6778777777764321 21 35788888999999
Q ss_pred HHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcc---------cccchhHHHhhhHHHHHHHHH
Q 013044 159 IGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD---------LVAGWRYMYGASTPLAVIMGM 229 (451)
Q Consensus 159 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~---------~~~~wr~~f~~~~~~~~~~~~ 229 (451)
+|.+...+...+++.+..|++.++.++|++.....+|..+|..++..... ......+.|...++.+++..+
T Consensus 391 ~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v 470 (489)
T PRK10207 391 LGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAV 470 (489)
T ss_pred HHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999988876531 011356777777766666444
Q ss_pred Hhh
Q 013044 230 GMW 232 (451)
Q Consensus 230 ~~~ 232 (451)
+.+
T Consensus 471 ~~~ 473 (489)
T PRK10207 471 VMA 473 (489)
T ss_pred HHH
Confidence 333
|
|
| >PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters | Back alignment and domain information |
|---|
Probab=98.39 E-value=2.5e-09 Score=103.10 Aligned_cols=137 Identities=20% Similarity=0.172 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHH--H---hh-----hHHHHHHHHHHHHHHHhhhhhhHHHH
Q 013044 102 GSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTA--L---AP-----DFIIMVVGRFVFGIGIGLAMHAAPMY 171 (451)
Q Consensus 102 ~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~--~---~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~ 171 (451)
...+...++.++...+.||+|||+.++.+.++.+++.+..+ . .+ ++..+............+..+....+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~ 373 (451)
T PF00083_consen 294 ILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIY 373 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeecccccccccccccccc
Confidence 33445556667777999999999999999999888877775 1 12 12222222211111122345666678
Q ss_pred HHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHH-HHHHhhcccCchH
Q 013044 172 IAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI-MGMGMWWLPASPR 239 (451)
Q Consensus 172 i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~-~~~~~~~~~e~~~ 239 (451)
..|.+|.+.|+++.++......++.++++.+...+.+.. +-...+.+.++++++ .++.++++||+..
T Consensus 374 ~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~-~~~~~~~i~~~~~~i~~i~~~~~lpET~g 441 (451)
T PF00083_consen 374 TAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNL-GGWGVFLIFAGVCLIAIIFVYFFLPETKG 441 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccc-cccccchhhHHHHHHHHhheeEEEeeCCC
Confidence 899999999999999999988899988888887777665 423445555555444 6667778999853
|
Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane |
| >PRK15462 dipeptide/tripeptide permease D; Provisional | Back alignment and domain information |
|---|
Probab=98.37 E-value=2.5e-06 Score=81.53 Aligned_cols=116 Identities=13% Similarity=0.107 Sum_probs=80.7
Q ss_pred chhHHHHhHHHHHH-HcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhc-CCchhhhchhHHHHHHHHHHHHhhhccCC
Q 013044 323 GQPSVLYYAASILQ-SAGFSAASDATRVSILLGLFKLIMTGLAVLVVERL-GRRPLLLGGVSGIVISLFLLGSYYLFLDD 400 (451)
Q Consensus 323 ~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (451)
.++.+..++|.+++ +.|+ +..+++...........++.+++|+++||+ |||+.+..+.++..++.++++.. ..
T Consensus 24 s~Yg~~~~L~~yL~~~lgl-s~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~----~~ 98 (493)
T PRK15462 24 SFYGMRALLILYLTNQLKY-DDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGAS----EI 98 (493)
T ss_pred HHHHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHh----hc
Confidence 34556667777765 4688 889999999999999999999999999999 99999999988888877655421 11
Q ss_pred cchHHHHHHHHHHHhhccccCCCceeeeeeecchhhh--hhhhhhhee
Q 013044 401 VPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEM--TRIVCSIYC 446 (451)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 446 (451)
......+.+.+...+.+. ..+....+..|.+|++ +|.++.++.
T Consensus 99 ~~~~~~l~l~li~iG~G~---~~~~~~alv~elfp~~~~~R~sgf~i~ 143 (493)
T PRK15462 99 HPSFLYLSLAIIVCGYGL---FKSNVSCLLGELYEPTDPRRDGGFSLM 143 (493)
T ss_pred chhHHHHHHHHHHHhccc---ccccHHHHHHHHCCCCCccccceehHH
Confidence 122223233333344443 3455567788988875 576665543
|
|
| >KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.29 E-value=5.4e-06 Score=73.91 Aligned_cols=138 Identities=17% Similarity=0.182 Sum_probs=118.3
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhc--chHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILG--RRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMH 166 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G--rr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~ 166 (451)
||.++.|.|-+.+...+...+.+....+..||.. -+-.+..++.+..=..++.+.++....+.++-.+-.+..+...+
T Consensus 292 fg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~~vt 371 (451)
T KOG2615|consen 292 FGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTASVVT 371 (451)
T ss_pred cCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHhhH
Confidence 8999999999999999999999999999999988 78888888888888888888899999999999999999999999
Q ss_pred hHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHH
Q 013044 167 AAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (451)
Q Consensus 167 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~ 226 (451)
....++....|.++||.+.|+..+...++-++||+++|.+.....+=+..+...+.+.++
T Consensus 372 ~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~~~~a~~~~~~L~~~ 431 (451)
T KOG2615|consen 372 CLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQGAQPAYIAWGALLLI 431 (451)
T ss_pred HHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEecCCCceeeehHHHHHH
Confidence 999999999999999999999999999999999999988765332334444444444333
|
|
| >KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.28 E-value=6.2e-06 Score=72.40 Aligned_cols=302 Identities=19% Similarity=0.138 Sum_probs=181.2
Q ss_pred ccCCchhHH-HHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhh
Q 013044 89 YDLSSVEIG-LITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHA 167 (451)
Q Consensus 89 ~~~s~~~~g-~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 167 (451)
.+++..++. -+.-...-.+.+.-++.=.+.|-.-.|++++.-.+.....-++.-+.++.+.+=+.-++.|...+ ...+
T Consensus 36 ~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tA-aEIA 114 (433)
T KOG3810|consen 36 KNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATA-AEIA 114 (433)
T ss_pred CCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHH-HHHh
Confidence 455655443 23333444556666666678999988999888877777778888889999999999999999877 6778
Q ss_pred HHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccc-cchhHHHhhhHHHHHHHHHHhhcccCchHHHHHhhc
Q 013044 168 APMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV-AGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAM 246 (451)
Q Consensus 168 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~-~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 246 (451)
-++++-+..+++++.++.+...++.-.|..+|..++-.+.... .++...-++......+.....+++|..++...-+.+
T Consensus 115 YysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~~~ 194 (433)
T KOG3810|consen 115 YYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFHRL 194 (433)
T ss_pred hhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhhcc
Confidence 8889999999999999999999999999999999999887642 144555556655555666677788877654433321
Q ss_pred cccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhH
Q 013044 247 KRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPS 326 (451)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (451)
+++.. ..+....+. ..+..+..+. .-..-..++.+..++| .++...+++.....+++-
T Consensus 195 ~~~~~-----------v~~~e~~~~----~~~~~~~l~~---~~~~l~~~l~~~y~np----~ll~WSlWwAl~scg~~Q 252 (433)
T KOG3810|consen 195 EDKIS-----------VGDLEEMNP----QASYMSYLRG---AFVLLWRDLQECYSNP----RLLKWSLWWALASCGYYQ 252 (433)
T ss_pred cccce-----------eccchhcCc----cchhhHHHHH---HHHHHHHHHHHHhcCc----hhhhhHHHHHHhhchhHH
Confidence 11110 000000000 0000000000 0000011233333433 333334445555556667
Q ss_pred HHHhHHHHHHHcCC-CCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCc-hh-hhchhHHHHHHHHHHHHhhhccCCcch
Q 013044 327 VLYYAASILQSAGF-SAASDATRVSILLGLFKLIMTGLAVLVVERLGRR-PL-LLGGVSGIVISLFLLGSYYLFLDDVPA 403 (451)
Q Consensus 327 ~~~~~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (451)
+.+|...+.++..- ....--|..-.+..+.+.++.+..|.+--+..|. .. +.++....+.+++++. ..++.|
T Consensus 253 V~nY~Q~LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~-----~t~~Iw 327 (433)
T KOG3810|consen 253 VTNYTQILWKEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMA-----QTQHIW 327 (433)
T ss_pred HHHHHHHHHHhhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhh-----ccccee
Confidence 77787777766531 0112233445566677777888888875444443 33 3333333332222222 256678
Q ss_pred HHHHHHHHHHHhhcc
Q 013044 404 VAVVALLLYVGCYQV 418 (451)
Q Consensus 404 ~~~~~~~~~~~~~~~ 418 (451)
+..+...++...+.+
T Consensus 328 ~~Ya~yvlfr~~y~l 342 (433)
T KOG3810|consen 328 VCYAGYVLFRVIYQL 342 (433)
T ss_pred hhhhhHHHHHhhHhh
Confidence 888888888888777
|
|
| >TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter | Back alignment and domain information |
|---|
Probab=98.27 E-value=3.5e-05 Score=73.45 Aligned_cols=141 Identities=12% Similarity=0.009 Sum_probs=111.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhc-chHHHHHHHHHHHHHHHHHHHhhh---------------------HHHHHHHHH
Q 013044 98 LITSGSLYGALIGSILAFNIADILG-RRRELILAALLYLVGALVTALAPD---------------------FIIMVVGRF 155 (451)
Q Consensus 98 ~~~s~~~~~~~~~~~~~g~l~dr~G-rr~~~~~~~~l~~~~~~~~~~~~~---------------------~~~l~~~r~ 155 (451)
+....+.+...+.+++.-++.+|+| ||++..++.++.+++.+...+.++ .+..++.-.
T Consensus 309 ~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 388 (477)
T TIGR01301 309 FGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFA 388 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHH
Confidence 4455555666677788889999999 578879998998888888876543 377788889
Q ss_pred HHHHHHhhhhhhHHHHHHhccCC--CCcchHHHHHHHHHHHHHHHHHHHhhhhccccc-chhHHHhhhHHHHHH-HHHHh
Q 013044 156 VFGIGIGLAMHAAPMYIAETAPT--PMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVA-GWRYMYGASTPLAVI-MGMGM 231 (451)
Q Consensus 156 l~G~~~~~~~~~~~~~i~~~~~~--~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~-~wr~~f~~~~~~~~~-~~~~~ 231 (451)
+.|+..+.....-++++++..++ ++.|..+|+++.+..+.+++..+..|.+.+..+ +-.+.+.+.++..++ .+...
T Consensus 389 ~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~ 468 (477)
T TIGR01301 389 ILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLAL 468 (477)
T ss_pred HhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999995 456999999999999999999988887554332 456778888888877 45555
Q ss_pred hcccCch
Q 013044 232 WWLPASP 238 (451)
Q Consensus 232 ~~~~e~~ 238 (451)
+.+|.++
T Consensus 469 ~~~~~~~ 475 (477)
T TIGR01301 469 ILLPRPR 475 (477)
T ss_pred HhCCCCC
Confidence 6677654
|
This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot. |
| >COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.23 E-value=2.3e-05 Score=70.80 Aligned_cols=135 Identities=13% Similarity=0.115 Sum_probs=111.6
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 168 (451)
.|.++.+.....+.+..+.++|.+++.++..|+...|.+.+..++..+-++..+++++.+.+. +-++.|+..+..+|..
T Consensus 267 ~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~v~~~-~l~~ig~F~simfPTI 345 (422)
T COG0738 267 LGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGGVVALY-ALFLIGLFNSIMFPTI 345 (422)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcChHHHH-HHHHHHHHhHHHHHHH
Confidence 588999999999999999999999999999999999999999999998899999999965544 5578899999999999
Q ss_pred HHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHH
Q 013044 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIM 227 (451)
Q Consensus 169 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~ 227 (451)
.+...+..+ ++ ....+..-....+|.++-|.+.|++.|.. |-...+.+...+|.+.
T Consensus 346 fslal~~l~-~~-ts~~s~~l~maivGGAiiP~l~G~i~d~~-g~~~~~~~~pllc~ly 401 (422)
T COG0738 346 FSLALKNLG-EH-TSVGSGLLVMAIVGGAIIPPLQGVIADMF-GIQLTFLIVPLLCYLY 401 (422)
T ss_pred HHHHHhccC-cc-ccccceeeeeheecchHHHHHHHHHHHhh-hhHHHHHHHHHHHHHH
Confidence 999999998 44 34444444556788899999999999987 7777777544554443
|
|
| >KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.22 E-value=6.7e-05 Score=71.21 Aligned_cols=119 Identities=17% Similarity=0.201 Sum_probs=108.4
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHh-hhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAF-NIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHA 167 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g-~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 167 (451)
+++++.+.+...+.......+++++.. .+...+|-|+++..|++.-.+...+.+++++.|+++....+.++. ....|.
T Consensus 272 f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~-~~~~pa 350 (463)
T KOG2816|consen 272 FGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALA-GIVFPA 350 (463)
T ss_pred cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhh-cchhHH
Confidence 899999999999988888888888777 778889999999999999999999999999999999999888886 558899
Q ss_pred HHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcc
Q 013044 168 APMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD 208 (451)
Q Consensus 168 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~ 208 (451)
..+.++.+..++++|++.++.....++...++|.+-+.+..
T Consensus 351 ~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 351 IRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred HHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 99999999999999999999999999999999998777653
|
|
| >PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.2e-05 Score=78.06 Aligned_cols=148 Identities=20% Similarity=0.257 Sum_probs=112.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhhcc-hHHHHHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHHHhhhhhhHHH
Q 013044 94 VEIGLITSGSLYGALIGSILAFNIADILGR-RRELILAALLYLVGALVTAL--APDFIIMVVGRFVFGIGIGLAMHAAPM 170 (451)
Q Consensus 94 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~~~~~~~~l~~~~~~~~~~--~~~~~~l~~~r~l~G~~~~~~~~~~~~ 170 (451)
...++....+.++..+++++.|.+..+++| |+.++++.++..++.-+.+. .+|....+..-++.|++.|........
T Consensus 349 ~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~ 428 (599)
T PF06609_consen 349 TEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIV 428 (599)
T ss_pred ceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHH
Confidence 356888888899999999999999998887 44556777666655444443 355666677788999999988888888
Q ss_pred HHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcc------------------------------------------
Q 013044 171 YIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD------------------------------------------ 208 (451)
Q Consensus 171 ~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~------------------------------------------ 208 (451)
...-..|+++-+.+.++..+.-.+|..+|..+-..+..
T Consensus 429 ~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~~n~~~~~l~~~v~~a~~~aglp~~sl~~li~a~~~~~~~a~~~ 508 (599)
T PF06609_consen 429 IAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIFTNKLPKELPKYVAPAALAAGLPESSLPALIEALAAGNLEALAA 508 (599)
T ss_pred eeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhHhHHHHHHHHHHhcCCChhhHHHHHHHHhccChhHHhh
Confidence 77777888899999999999888888877766543221
Q ss_pred -------------------cccchhHHHhhhHHHHHHHHHHhhcccCchHHH
Q 013044 209 -------------------LVAGWRYMYGASTPLAVIMGMGMWWLPASPRWL 241 (451)
Q Consensus 209 -------------------~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~ 241 (451)
+..++|++|+....++++.++..+++++..++.
T Consensus 509 iPGit~~i~~a~~~A~~~aYa~ay~~V~~~siaFG~vaiiaa~fl~d~~~~m 560 (599)
T PF06609_consen 509 IPGITPEIIAAVVAAFQEAYAHAYRYVYYSSIAFGVVAIIAALFLGDIDKYM 560 (599)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChHHhh
Confidence 001578999999999999888888988765543
|
Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes []. |
| >KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.19 E-value=6.3e-05 Score=67.14 Aligned_cols=142 Identities=15% Similarity=0.087 Sum_probs=95.5
Q ss_pred HHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhh-----hhcchHHHHH
Q 013044 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIAD-----ILGRRRELIL 129 (451)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d-----r~Grr~~~~~ 129 (451)
..+.+.++.+|...+... .+|.+.+. -|.|.++.+...-++. -..--++|.++.| |+||||..++
T Consensus 34 llLl~LYllQGiP~GL~~-~iP~lL~a-------k~vSyt~~a~fS~ay~--P~sLKllWaPiVDs~y~k~~GrrksWvv 103 (510)
T KOG3574|consen 34 LLLLFLYLLQGIPLGLIG-AIPLLLQA-------KGVSYTSQAIFSFAYW--PFSLKLLWAPIVDSVYSKRFGRRKSWVV 103 (510)
T ss_pred HHHHHHHHHcCCchhHhh-hhHHHhcC-------CCcchhhhhhhhhhhh--HHHHHHHHHhhhHHHHHHhhccccceee
Confidence 344456678888888877 78888765 4677777664433221 1223468888889 9999987544
Q ss_pred -HHHHHHHHHHHHHHh-----------hhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHH
Q 013044 130 -AALLYLVGALVTALA-----------PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMV 197 (451)
Q Consensus 130 -~~~l~~~~~~~~~~~-----------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ 197 (451)
+..+.+..+++.+.. ++...+...-++.-+.++....+.-.+.-.+..+++-|.+......+.+.|.+
T Consensus 104 p~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~Gyf 183 (510)
T KOG3574|consen 104 PCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYF 183 (510)
T ss_pred ehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHH
Confidence 444444444444432 23344444556777778888888888888888999999888888877888777
Q ss_pred HHHHHhhhh
Q 013044 198 GGYGIGSLL 206 (451)
Q Consensus 198 ~g~~l~~~l 206 (451)
++..+--.+
T Consensus 184 L~~~ifLaL 192 (510)
T KOG3574|consen 184 LGNVVFLAL 192 (510)
T ss_pred hhcceeeEe
Confidence 776654444
|
|
| >PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters | Back alignment and domain information |
|---|
Probab=98.16 E-value=7.4e-05 Score=69.95 Aligned_cols=108 Identities=15% Similarity=0.261 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHHHHHHHHh--h-h------HHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCC---CcchHHHHHHHHH
Q 013044 125 RELILAALLYLVGALVTALA--P-D------FIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTP---MRGQLISLKEFFI 192 (451)
Q Consensus 125 ~~~~~~~~l~~~~~~~~~~~--~-~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 192 (451)
|+++++.++..+|.++..++ + . .+.++++-.+.++|.|+.-|...++++|.++++ +|.+.+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 57888999999999885543 2 2 267899999999999999999999999999765 4677788899999
Q ss_pred HHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhhc
Q 013044 193 VLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW 233 (451)
Q Consensus 193 ~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~ 233 (451)
++|..++..+.+++.++. +|.+.|.+.++..++.++..+.
T Consensus 82 n~G~~~~~~~~~~i~~~~-~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNY-GWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS--HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhcccc-chhhhhhHHHHHHHHHHHHHHh
Confidence 999999999999999887 9999999999888875554443
|
The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C. |
| >PTZ00207 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.16 E-value=6.8e-05 Score=73.21 Aligned_cols=141 Identities=9% Similarity=-0.075 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhh---hhc-----chHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHH
Q 013044 99 ITSGSLYGALIGSILAFNIAD---ILG-----RRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPM 170 (451)
Q Consensus 99 ~~s~~~~~~~~~~~~~g~l~d---r~G-----rr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 170 (451)
+.+++.++..+|-+..|.++. |.+ +|...+....+..++.++.++.-....+++.-++.|++.|..+++...
T Consensus 396 ~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~~ 475 (591)
T PTZ00207 396 LTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSVCIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIAL 475 (591)
T ss_pred ehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHHH
Confidence 677777777777777777662 211 122333333336677777766644478999999999999999999999
Q ss_pred HHHhccCCCCcchHHHHHHHHHHHHHHHH-HHHhhhhccccc------------chhHHHhhhHHHHHHHHHH-hhcccC
Q 013044 171 YIAETAPTPMRGQLISLKEFFIVLGMVGG-YGIGSLLVDLVA------------GWRYMYGASTPLAVIMGMG-MWWLPA 236 (451)
Q Consensus 171 ~i~~~~~~~~r~~~~~~~~~~~~~G~~~g-~~l~~~l~~~~~------------~wr~~f~~~~~~~~~~~~~-~~~~~e 236 (451)
.++|.|. |+-|+-..+...+..+|..+- -.+.|.+.+... =+|.+|.+.+.+++...+. ..+.-+
T Consensus 476 i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~R 554 (591)
T PTZ00207 476 VTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHLQ 554 (591)
T ss_pred HHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhheeee
Confidence 9999999 899999999999999998776 556666664211 1678899998888884443 333334
Q ss_pred chHH
Q 013044 237 SPRW 240 (451)
Q Consensus 237 ~~~~ 240 (451)
..++
T Consensus 555 ~r~~ 558 (591)
T PTZ00207 555 YRRL 558 (591)
T ss_pred hHHH
Confidence 4443
|
|
| >KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.15 E-value=7e-05 Score=73.39 Aligned_cols=141 Identities=15% Similarity=0.073 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhH-------------HHHHHHHHHHHHHHhh
Q 013044 97 GLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDF-------------IIMVVGRFVFGIGIGL 163 (451)
Q Consensus 97 g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~-------------~~l~~~r~l~G~~~~~ 163 (451)
.+...+..+...++..+...+.||+|||+.++.+...+.++.++.+..... ..+...-+.......+
T Consensus 332 ~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g 411 (513)
T KOG0254|consen 332 FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIG 411 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcc
Confidence 555556666677777788999999999999999999999999988864211 2222223333333344
Q ss_pred hhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHH-HH-HHhhcccCch
Q 013044 164 AMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI-MG-MGMWWLPASP 238 (451)
Q Consensus 164 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~-~~-~~~~~~~e~~ 238 (451)
..++...+.+|.+|.+-|+++.++......+...+-...-..+.+.. ++...|...+..+.+ .. ...+++||+.
T Consensus 412 ~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~-~~~~~f~~f~~~~~~~~~~fv~~~~pETk 487 (513)
T KOG0254|consen 412 WGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEAL-GIGGTFGYFGGICLLSLIIFVFFFVPETK 487 (513)
T ss_pred cccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhc-cccchHHHHHHHHHHHHHHHheEEcccCC
Confidence 55666678899999999999998876665555544333333333332 345666666666555 44 4667789985
|
|
| >KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.15 E-value=1e-05 Score=74.14 Aligned_cols=125 Identities=10% Similarity=0.004 Sum_probs=98.2
Q ss_pred HHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHHHHH
Q 013044 313 AGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLG 392 (451)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~ 392 (451)
.++....+..--+.+..-.+..-+.++. +....|++...+.+...+++++.|++.||+.|++++.+|..+-.++.+..+
T Consensus 38 l~~vnlmny~Dr~~iagv~~~v~~~fni-~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~ 116 (493)
T KOG1330|consen 38 LCLVNLMNYADRYTIAGVLKEVQTYFNI-SDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASG 116 (493)
T ss_pred HHHHHHHHHhhhhhhhhhhHHHHHhcCC-CchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHH
Confidence 3333333333333444444444455677 889999999999999999999999999999999999999988888888776
Q ss_pred HhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhhee
Q 013044 393 SYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYC 446 (451)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (451)
+. .+.|.+.+.-.+.+.+-+. +.|+...++++.+|++.|++..++-
T Consensus 117 fs-----~~Fwq~~l~R~~vGiGeAs---~~~ia~s~IaD~f~~~~Rs~~~~if 162 (493)
T KOG1330|consen 117 FS-----NHFWQVLLCRGFVGIGEAS---YSPIAPSLIADSFPDDKRSRVLGIF 162 (493)
T ss_pred HH-----HHHHHHHHHHHHhccchhh---hcccchhHhhhcCcchhhhHHHHHh
Confidence 63 5567777777777777775 8999999999999999999988764
|
|
| >PRK15403 multidrug efflux system protein MdtM; Provisional | Back alignment and domain information |
|---|
Probab=98.12 E-value=0.00023 Score=67.76 Aligned_cols=135 Identities=15% Similarity=0.168 Sum_probs=92.1
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHH-----hhhHHHHHHHHHHHHHHHhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL-----APDFIIMVVGRFVFGIGIGL 163 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~-----~~~~~~l~~~r~l~G~~~~~ 163 (451)
+|.++.+.++.......+..++..+.+.+.++.++++.+.....+..++.++... .++++.++++.++.|+|.+.
T Consensus 249 ~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~G~~~ 328 (413)
T PRK15403 249 GGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYAFGIGL 328 (413)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHH
Confidence 5889999999988888888888888888775554544433333333333333321 23444567788889999998
Q ss_pred hhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHH
Q 013044 164 AMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (451)
Q Consensus 164 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~ 226 (451)
..+......- .-.+..+|++.++.+.....+..+++..++++.+. +=++.|...+.+..+
T Consensus 329 ~~p~~~~~al-~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~ 388 (413)
T PRK15403 329 IFPTLFRFTL-FSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN--GGRLPFHLLAVVAGV 388 (413)
T ss_pred HhHHHHHHHh-ccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCchHHHHHHHHHHH
Confidence 8887775332 22233579999999999888999999999988665 446666555554443
|
|
| >PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions | Back alignment and domain information |
|---|
Probab=98.11 E-value=0.0026 Score=60.84 Aligned_cols=117 Identities=12% Similarity=0.069 Sum_probs=84.4
Q ss_pred CchhHHHHHHHHHH-HHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHh--h-------h---------------
Q 013044 92 SSVEIGLITSGSLY-GALIGSILAFNIADILGRRRELILAALLYLVGALVTALA--P-------D--------------- 146 (451)
Q Consensus 92 s~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~--~-------~--------------- 146 (451)
+++.+.++-....+ ...+...+..+++++++|++++-+....+.....+.++. | +
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~ 135 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK 135 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH
Confidence 56667777665555 556667889999999999999887777777666666652 1 1
Q ss_pred -------HHHHHHHHHHHHHHHhhhhh-hHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcc
Q 013044 147 -------FIIMVVGRFVFGIGIGLAMH-AAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD 208 (451)
Q Consensus 147 -------~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~ 208 (451)
.|.+.+..+..-+-...... .-..+..|.++.+|-.|..++++.+.++|.+++..+..++.+
T Consensus 136 ~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 136 GFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 13333333444443333333 456788999999999999999999999999999998888877
|
One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane |
| >KOG3762 consensus Predicted transporter [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.11 E-value=2e-05 Score=73.59 Aligned_cols=114 Identities=12% Similarity=-0.009 Sum_probs=88.1
Q ss_pred HHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHH
Q 013044 326 SVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVA 405 (451)
Q Consensus 326 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (451)
.+.+++--.+++.+. .+..-|......-.+.++.-++.+++++|+|+-+++.+++.+..+=++.+..+ .++|.+
T Consensus 389 lv~tFLfWHled~~~-~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L-----~n~W~v 462 (618)
T KOG3762|consen 389 LVFTFLFWHLEDLGG-IKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYL-----QNPWMV 462 (618)
T ss_pred HHHHHHHHHHhhcCC-cceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHh-----cCchhe
Confidence 333444334677776 67777788888889999999999999999999999999888888777766543 667777
Q ss_pred HHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheeee
Q 013044 406 VVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCAK 448 (451)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (451)
+..=++-+..++. .+.....|++...|++.|.++.++.+.
T Consensus 463 LPieilqgit~al---iWaa~~sY~s~vaPp~l~at~Q~l~~g 502 (618)
T KOG3762|consen 463 LPIEILQGITHAL---IWAAIISYASHVAPPGLRATAQGLLQG 502 (618)
T ss_pred eeHHHHHHHHHHH---HHHHHHHHHHhhCCCcchHHHHHHHHH
Confidence 7666677777776 556667888999999999999887653
|
|
| >TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT) | Back alignment and domain information |
|---|
Probab=98.06 E-value=0.00016 Score=68.44 Aligned_cols=89 Identities=16% Similarity=0.010 Sum_probs=49.0
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhh---c-ccc-cchh--HHHh
Q 013044 146 DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLL---V-DLV-AGWR--YMYG 218 (451)
Q Consensus 146 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l---~-~~~-~~wr--~~f~ 218 (451)
.++..++.-++.|++.+........+.+ .+|++ .++.+..+.+++.+++.++--.. . +.. ..++ ..|.
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~----~~~a~~~G~g~aGv~~s~~~ii~~a~~~~~~~~~~~a~~YF~ 179 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG-VFPST----YSSAVMSGQGLAGVLTSLAMILVKASGNDSHGLKKSALGYFG 179 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc-cCCHH----HHHHHHhcchhHHHHHHHHHHHHHHhcCCccchhhhhhhHHH
Confidence 4666777778899999988888887766 45533 34444555555555444432221 1 110 0122 2333
Q ss_pred hhHHHHHHHHHHhhcccCchH
Q 013044 219 ASTPLAVIMGMGMWWLPASPR 239 (451)
Q Consensus 219 ~~~~~~~~~~~~~~~~~e~~~ 239 (451)
+..++.++.++.+..++..|.
T Consensus 180 ~a~~v~l~~i~~~~~l~k~~~ 200 (437)
T TIGR00939 180 TPCVVQLICIVCYLLLPKLPF 200 (437)
T ss_pred HHHHHHHHHHHHHHHHhcCHH
Confidence 444445556666666776664
|
|
| >PF12832 MFS_1_like: MFS_1 like family | Back alignment and domain information |
|---|
Probab=98.06 E-value=1.2e-05 Score=55.35 Aligned_cols=61 Identities=20% Similarity=0.231 Sum_probs=50.5
Q ss_pred cccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHH
Q 013044 67 DIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (451)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~ 134 (451)
..+..-|.+|...++ .|+++.++|.+.++..+...++.+++|.++||+|+++.++....+.
T Consensus 15 ~~g~~~Pfl~~~~~~-------~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 15 ALGCLYPFLPLYLKQ-------LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHhhhhHhhhh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 344455666666665 7999999999999999999999999999999999998887766543
|
|
| >TIGR00806 rfc RFC reduced folate carrier | Back alignment and domain information |
|---|
Probab=98.02 E-value=2.1e-05 Score=73.47 Aligned_cols=114 Identities=12% Similarity=0.070 Sum_probs=92.7
Q ss_pred hHHHHhHHHHHHHcCCCCchh-HHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhhhccCCcch
Q 013044 325 PSVLYYAASILQSAGFSAASD-ATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPA 403 (451)
Q Consensus 325 ~~~~~~~~~~~~~~~~~s~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (451)
....+-.|++.++.|+ +..+ .+.+...+..+..+..+.+|++.||+|.|+++..+.+.-.+..++.++. +..+
T Consensus 43 ~n~s~a~p~L~~elgl-T~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa-----~Sl~ 116 (511)
T TIGR00806 43 PGESFITPYLLTVLNF-TEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLG-----TSVW 116 (511)
T ss_pred chHHHHHHHHHHHcCC-CHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH-----HHHH
Confidence 3555667777788999 8888 9999999999999999999999999999999998888888877776653 3455
Q ss_pred HHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheeee
Q 013044 404 VAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCAK 448 (451)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (451)
.+.+.-++++.+.+. .+ ....++...+|++.|+++.++..+
T Consensus 117 ~L~i~R~llGvaEA~--~~--A~~syI~~WfP~kER~ratsi~~s 157 (511)
T TIGR00806 117 HMQLMEVFYSVTMAA--RI--AYSSYIFSLVPPSRYQRAAAYSRA 157 (511)
T ss_pred HHHHHHHHHHHHHHH--HH--HHHHHHHHHCCHHHHHHHHHHHHH
Confidence 566666777777776 33 677888999999999999987643
|
Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined. |
| >PF12832 MFS_1_like: MFS_1 like family | Back alignment and domain information |
|---|
Probab=98.01 E-value=5.1e-05 Score=52.32 Aligned_cols=63 Identities=17% Similarity=0.315 Sum_probs=53.7
Q ss_pred HHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchh
Q 013044 318 FQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGV 381 (451)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~ 381 (451)
+..+.+...+.-|.+.++++.|+ +..+.+.+..+..+..+++.++.|.++||+++++......
T Consensus 10 f~~f~~~g~~~Pfl~~~~~~~Gl-~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~ 72 (77)
T PF12832_consen 10 FFYFAALGCLYPFLPLYLKQLGL-SPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGS 72 (77)
T ss_pred HHHHHHHHHHHhhhhHhhhhcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHH
Confidence 33344556777888999999999 9999999999999999999999999999999988776533
|
|
| >COG3202 ATP/ADP translocase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.014 Score=54.72 Aligned_cols=119 Identities=13% Similarity=0.075 Sum_probs=89.8
Q ss_pred CCchhHHHHHHHHHH-HHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHh---------hh--------------
Q 013044 91 LSSVEIGLITSGSLY-GALIGSILAFNIADILGRRRELILAALLYLVGALVTALA---------PD-------------- 146 (451)
Q Consensus 91 ~s~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~---------~~-------------- 146 (451)
.++..+.++-+...+ +..+..++.+++.+++.|++++-+.+..+....+++++. ++
T Consensus 58 ~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~ 137 (509)
T COG3202 58 QGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMF 137 (509)
T ss_pred CcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCcc
Confidence 456778888888888 788899999999999999999988888888877777753 11
Q ss_pred ---------HHHHHHHHHHHHHHHhhhhh-hHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhccc
Q 013044 147 ---------FIIMVVGRFVFGIGIGLAMH-AAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL 209 (451)
Q Consensus 147 ---------~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~ 209 (451)
.|...+...+.-+-...... .-.....|.++.+|-.|..++++.+.+++..++..+..++.++
T Consensus 138 l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 138 LKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred ceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 03333444444333333333 4455678999989999999999999999999999998888763
|
|
| >TIGR00805 oat sodium-independent organic anion transporter | Back alignment and domain information |
|---|
Probab=97.84 E-value=4.2e-05 Score=76.42 Aligned_cols=134 Identities=13% Similarity=-0.027 Sum_probs=94.6
Q ss_pred HHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHHH
Q 013044 311 IGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFL 390 (451)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~ 390 (451)
+...+..+.+.........-.+.+-+++++ +..+.+++.+...++.+++.++.+++.||.+||+.+.++.++.+++.++
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek~F~l-ss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll 114 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIERRFKL-STSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFL 114 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhhCC-CCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHH
Confidence 434434444443334445555666678898 8888999999999999999999999999999999999999999999887
Q ss_pred HHHhhhcc-------------------------C-----------------C--c-chH-HHHHHHHHHHhhccccCCCc
Q 013044 391 LGSYYLFL-------------------------D-----------------D--V-PAV-AVVALLLYVGCYQVIKNFNP 424 (451)
Q Consensus 391 ~~~~~~~~-------------------------~-----------------~--~-~~~-~~~~~~~~~~~~~~~~~~~~ 424 (451)
+++.-+.. . . . .+. .++.-++.+.+.+ ...+
T Consensus 115 ~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~---~~~~ 191 (633)
T TIGR00805 115 LSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGAT---PIFP 191 (633)
T ss_pred HhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCC---cchh
Confidence 76532100 0 0 1 122 2233444444444 3677
Q ss_pred eeeeeeecchhhhhhhhhhheeee
Q 013044 425 SKIYHFRIFFFEMTRIVCSIYCAK 448 (451)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~ 448 (451)
....+++|.+|++.|+...++..+
T Consensus 192 ~~~~~i~d~~~~~~~~~~~~i~~~ 215 (633)
T TIGR00805 192 LGISYIDDFAKSKNSPLYIGILES 215 (633)
T ss_pred cCchhhhccCCccccHHHHHHHHH
Confidence 888999999999999998886543
|
Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange. |
| >KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00047 Score=67.84 Aligned_cols=139 Identities=21% Similarity=0.131 Sum_probs=103.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHH---HHHHHHHHHHHHHhhhhhhHHHHHHhc
Q 013044 99 ITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFI---IMVVGRFVFGIGIGLAMHAAPMYIAET 175 (451)
Q Consensus 99 ~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~---~l~~~r~l~G~~~~~~~~~~~~~i~~~ 175 (451)
...........+....+...|++|||.....+.++..++.++.++..+.. ...+...+..++.+..+.....+.+|.
T Consensus 355 ~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el 434 (521)
T KOG0255|consen 355 NFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAEL 434 (521)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 33333345566666678999999999999999999999999999876543 356666666666777777779999999
Q ss_pred cCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHH-HHHHhhcccCchH
Q 013044 176 APTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI-MGMGMWWLPASPR 239 (451)
Q Consensus 176 ~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~-~~~~~~~~~e~~~ 239 (451)
+|...|..+.+.......+|.+++|.+..........+.... .+....+ .++...++||+..
T Consensus 435 ~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~lpet~~ 497 (521)
T KOG0255|consen 435 IPTVVRNTAVGAISAAARLGSILAPLFPLLLRQMFPLLGLIL--FGWLALLLGLLSLLLLPETKG 497 (521)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHH--HHHHHHHHHHHHHhcCcccCC
Confidence 999999999999999999999999999876644221222222 3444444 4455578898753
|
|
| >PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00019 Score=66.08 Aligned_cols=111 Identities=20% Similarity=0.081 Sum_probs=81.8
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHH-----HHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhh
Q 013044 92 SSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY-----LVGALVTALAPDFIIMVVGRFVFGIGIGLAMH 166 (451)
Q Consensus 92 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~ 166 (451)
...+..+...+|.+|..++.--...+ |+ |++.+.+.+-. .+...+.-+.++.|..++.-+..|+..|..+.
T Consensus 279 ~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YV 354 (402)
T PF02487_consen 279 PRDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYV 354 (402)
T ss_pred HHHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHH
Confidence 35677788888887766664332211 23 44433332222 22222333468899999999999999999999
Q ss_pred hHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhh
Q 013044 167 AAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLL 206 (451)
Q Consensus 167 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l 206 (451)
.+...+.|-.++++|..++|....+-++|..++.+++-.+
T Consensus 355 NtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 355 NTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999888765
|
The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane |
| >KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.75 E-value=4e-05 Score=73.25 Aligned_cols=159 Identities=14% Similarity=-0.018 Sum_probs=99.1
Q ss_pred HHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhh----hcchHHHHHHHHH
Q 013044 58 ALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADI----LGRRRELILAALL 133 (451)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr~~~~~~~~l 133 (451)
++..++.......+..-+|.+.++ . .+.+..+.+.+.+.+.++.+++.+++|.++|| ..+|..+...+.+
T Consensus 279 ~l~~~~~~lv~~~~~~~lpl~l~~-~-----~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~ 352 (495)
T KOG2533|consen 279 SLCYFFLKLVNYGFSYWLPLYLKS-N-----GGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCL 352 (495)
T ss_pred HHHHHHHhhccccHHHHHHHHHHc-C-----CCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 344444444444445556655443 0 46889999999999999999999999999999 7788777777777
Q ss_pred HHHHH-HHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCC-cchHHHHHHHHHHHHHHHHHH-Hhhhhcccc
Q 013044 134 YLVGA-LVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPM-RGQLISLKEFFIVLGMVGGYG-IGSLLVDLV 210 (451)
Q Consensus 134 ~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~-r~~~~~~~~~~~~~G~~~g~~-l~~~l~~~~ 210 (451)
..+.. +.....++......+-.....+.....+.+....++...+.. |-...+....+.+.+.++++. ..+.....+
T Consensus 353 ~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y 432 (495)
T KOG2533|consen 353 YAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRY 432 (495)
T ss_pred HHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcch
Confidence 65555 444444434444444444555566667777777777775443 444444455455554444443 344344444
Q ss_pred cchhHHHhhhHHH
Q 013044 211 AGWRYMYGASTPL 223 (451)
Q Consensus 211 ~~wr~~f~~~~~~ 223 (451)
.|-+.|+.....
T Consensus 433 -~~~~~f~~~~~~ 444 (495)
T KOG2533|consen 433 -GWGAVFYMLVAA 444 (495)
T ss_pred -hhhhHHHHHHHH
Confidence 788888544433
|
|
| >PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00013 Score=62.93 Aligned_cols=121 Identities=17% Similarity=0.051 Sum_probs=83.4
Q ss_pred hhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhhhccCC
Q 013044 321 ITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDD 400 (451)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (451)
....+.+..|.|.+.++.|+ +..+...+.....++..+| ++.|.+.|++|.+..+.+|.....++...+.......-.
T Consensus 15 ~Gt~Y~Fs~yS~~Lk~~l~~-sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~ 92 (250)
T PF06813_consen 15 SGTTYTFSAYSPQLKSRLGY-SQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIP 92 (250)
T ss_pred cCcccchhhhhHHHHHHhCC-CHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccC
Confidence 34456788899999999999 9999999999999998875 889999999999999999999999988877655443322
Q ss_pred cchHHHHHHHHHHHhhccccCCC-ceeeeeeecchhhhhhhhhhhee
Q 013044 401 VPAVAVVALLLYVGCYQVIKNFN-PSKIYHFRIFFFEMTRIVCSIYC 446 (451)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 446 (451)
........++.+.++.+. ++. ........+-+|+ .||++.|+.
T Consensus 93 ~~~~~~~~~~~~l~~~s~--~~~~ta~lvt~~~NFP~-~RG~vvgil 136 (250)
T PF06813_consen 93 SLPVWLMCLFLFLGGNSS--CWFNTASLVTCVRNFPR-SRGTVVGIL 136 (250)
T ss_pred ccchHHHHHHHHHHcccH--HHhhhHHHHHHHHhCcc-ccCceehhh
Confidence 122222233333333333 222 2222333455664 689888764
|
|
| >KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.011 Score=54.43 Aligned_cols=97 Identities=18% Similarity=0.083 Sum_probs=50.0
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHhhhcCCchhhhchhH-HHHHHHHHHHHh--hhccCCcchHHHHHHHHHHHhhccccC
Q 013044 346 ATRVSIL-LGLFKLIMTGLAVLVVERLGRRPLLLGGVS-GIVISLFLLGSY--YLFLDDVPAVAVVALLLYVGCYQVIKN 421 (451)
Q Consensus 346 ~~~~~~~-~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (451)
....... +++...+|.+...++-.+- ||++.+.... ...+-++.+.-. ....-.+.++.+....+++..-|-
T Consensus 284 ~~~~~~l~fN~~d~vG~~~a~~~~~~~-~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGY--- 359 (406)
T KOG1479|consen 284 ALLLVFLSFNVFDLIGSILAALLTWPD-PRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGY--- 359 (406)
T ss_pred HHHHHHHHhHHHHHhhhhhhhcccCCC-CceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccch---
Confidence 3344444 7788888866666554433 3443332211 111111111100 001123455666666666666665
Q ss_pred CCceeeeeeecchhhhhhhhhhhee
Q 013044 422 FNPSKIYHFRIFFFEMTRIVCSIYC 446 (451)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (451)
...+...+..+.+|++.+..+..+.
T Consensus 360 ltsl~m~~aPk~v~~~e~e~aG~~m 384 (406)
T KOG1479|consen 360 LTSLIMMYAPKQVKPSEKEAAGNLM 384 (406)
T ss_pred HhhheehhcCCCCChHHHHHHHHHH
Confidence 5667777888877777777665543
|
|
| >TIGR00880 2_A_01_02 Multidrug resistance protein | Back alignment and domain information |
|---|
Probab=97.60 E-value=1.4e-05 Score=63.04 Aligned_cols=90 Identities=21% Similarity=0.139 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeee
Q 013044 351 ILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHF 430 (451)
Q Consensus 351 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (451)
....++.+++.++.+++.||+|||+.+..+.....++.+.+.. .++.+...+...+.+.+.+. ..+....+.
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~ 76 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFAL-----SSNITVLIIARFLQGFGAAF---ALVAGAALI 76 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHH-----hccHHHHHHHHHHHHHHHHH---HHHhHHHHH
Confidence 3456778889999999999999999998887777766655443 23445455555555555554 456677788
Q ss_pred ecchhhhhhhhhhheeee
Q 013044 431 RIFFFEMTRIVCSIYCAK 448 (451)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~ 448 (451)
.|..|++.|++..++...
T Consensus 77 ~~~~~~~~~~~~~~~~~~ 94 (141)
T TIGR00880 77 ADIYPPEERGVALGLMSA 94 (141)
T ss_pred HHHCChhhhhHHHHHHHH
Confidence 899999999988887553
|
|
| >PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ] | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.018 Score=54.14 Aligned_cols=145 Identities=13% Similarity=0.026 Sum_probs=81.0
Q ss_pred HHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhh-----hhhcchHHHHHH
Q 013044 56 FPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIA-----DILGRRRELILA 130 (451)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~-----dr~Grr~~~~~~ 130 (451)
.+.+.++++|...+......|.+.++.. -+.|.+|.|...-+ ..-+ -.-++|.++. .|+||||..++=
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~~-----~~~sy~q~~~fSla-~~Pf-SlKlLWaPiVDs~y~~~~GRRKSWiiP 76 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSMA-----KKVSYSQQAIFSLA-SYPF-SLKLLWAPIVDSVYSKRIGRRKSWIIP 76 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhcccc-----CCCChhHheeeeee-echh-HHHHhhhhhhhhhcccccCCcchhhhH
Confidence 4456678888888876566777665411 14566666532211 0111 1234555555 489999886542
Q ss_pred H-HHHHHHHHHHHHhh----------------------h--HHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHH
Q 013044 131 A-LLYLVGALVTALAP----------------------D--FIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLI 185 (451)
Q Consensus 131 ~-~l~~~~~~~~~~~~----------------------~--~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 185 (451)
. .+.++..+..+... + ...+...-++.=+-++....++-.+.-.+..+++++.+.
T Consensus 77 ~Q~l~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~AS 156 (544)
T PF13000_consen 77 IQYLSGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYAS 156 (544)
T ss_pred HHHHHHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHH
Confidence 2 22222222222111 0 112333333444555656666666777777889998888
Q ss_pred HHHHHHHHHHHHHHHHHhhhhc
Q 013044 186 SLKEFFIVLGMVGGYGIGSLLV 207 (451)
Q Consensus 186 ~~~~~~~~~G~~~g~~l~~~l~ 207 (451)
.-...+.+.|.+++..+--.+.
T Consensus 157 TcqtvG~~~Gyfls~tvFlaln 178 (544)
T PF13000_consen 157 TCQTVGQTAGYFLSFTVFLALN 178 (544)
T ss_pred HHHHhHhhhhHHHHHHHHHhhC
Confidence 8888888888887776655544
|
This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane |
| >PRK03612 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.011 Score=57.72 Aligned_cols=118 Identities=17% Similarity=0.138 Sum_probs=75.3
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHH---HHHH----HHhhhH-HHHHHHHHHHHHH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVG---ALVT----ALAPDF-IIMVVGRFVFGIG 160 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~---~~~~----~~~~~~-~~l~~~r~l~G~~ 160 (451)
+|-+..+.+.+.+++++|.++|+.+++++.++.-++. ..+-+.+..++ ..+. ++...+ ..++..-++.|+.
T Consensus 45 ~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~-~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l 123 (521)
T PRK03612 45 LGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGF-VAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGLL 123 (521)
T ss_pred hCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5778888999999999999999999998874433332 22221111111 1111 111111 2233445567888
Q ss_pred HhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcc
Q 013044 161 IGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD 208 (451)
Q Consensus 161 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~ 208 (451)
.|+..|....+..+... ++-+...|-......+|.++|.++.+++.-
T Consensus 124 ~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 124 IGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred HHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 88888887776655332 234677888888899999999999887654
|
|
| >KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0029 Score=61.91 Aligned_cols=153 Identities=15% Similarity=0.121 Sum_probs=119.2
Q ss_pred ccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhh-cchHHHHHHHHHHHHHHHHHHHhhh----
Q 013044 72 SCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADIL-GRRRELILAALLYLVGALVTALAPD---- 146 (451)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~l~~~~~~~~~~~~~---- 146 (451)
...+..+..+ ++.+...+.-..+.+.-......+.++.++|-| ||-+++.++.++..+|..+..++..
T Consensus 58 ~nlv~ylt~~-------~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l 130 (571)
T KOG1237|consen 58 SNLVTYLTLE-------LHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPAL 130 (571)
T ss_pred hHHHHHHHHH-------hccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 4445555555 677777788888888888888999999999975 9999999999998888655544311
Q ss_pred ---------------------HHHHHHHHHHHHHHHhhhhhhHHHHHHhccC---CC---CcchHHHHHHHHHHHHHHHH
Q 013044 147 ---------------------FIIMVVGRFVFGIGIGLAMHAAPMYIAETAP---TP---MRGQLISLKEFFIVLGMVGG 199 (451)
Q Consensus 147 ---------------------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~---~~---~r~~~~~~~~~~~~~G~~~g 199 (451)
...++.+.-+..+|.|+.-+...++-+|-++ ++ ++...+.++....++|..++
T Consensus 131 ~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a 210 (571)
T KOG1237|consen 131 LPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLA 210 (571)
T ss_pred CCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHH
Confidence 1356677778888999999999999999998 32 23467888899999999999
Q ss_pred HHHhhhhcccccchhHHHhhhHHHHHHHHHHhh
Q 013044 200 YGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMW 232 (451)
Q Consensus 200 ~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~ 232 (451)
..+..+.-+.. +|.+-|.+..+..++.+++++
T Consensus 211 ~t~~vyiq~~~-~w~lgf~i~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 211 QTVLVYIQDNV-GWKLGFGIPTVLNALAILIFL 242 (571)
T ss_pred HHHHHhhhhcc-cceeeccHHHHHHHHHHHHHH
Confidence 99888887776 999999998887776444433
|
|
| >COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0039 Score=58.46 Aligned_cols=135 Identities=16% Similarity=0.185 Sum_probs=102.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhhcch-------HHHHHHHHHHHHHHHHHHHh----------hhHHHHHHHHHH
Q 013044 94 VEIGLITSGSLYGALIGSILAFNIADILGRR-------RELILAALLYLVGALVTALA----------PDFIIMVVGRFV 156 (451)
Q Consensus 94 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr-------~~~~~~~~l~~~~~~~~~~~----------~~~~~l~~~r~l 156 (451)
-..+|..+...+.-.+.+++..++--+.++| .=+-+++.+.+.+.++.... -+.++++...++
T Consensus 324 vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l 403 (498)
T COG3104 324 VPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVL 403 (498)
T ss_pred cCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHH
Confidence 4457788888888888888888888775544 22456777777776666544 247899999999
Q ss_pred HHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhc------ccccchhHHHhhhHHHHHHHHH
Q 013044 157 FGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLV------DLVAGWRYMYGASTPLAVIMGM 229 (451)
Q Consensus 157 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~------~~~~~wr~~f~~~~~~~~~~~~ 229 (451)
+++|.=...|+..+++....|++-.+.+++.+......|..++..+++.-. +.. .-...|+..+...++..+
T Consensus 404 ~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~-~~~~~F~~~g~v~i~~~~ 481 (498)
T COG3104 404 QSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAF-IEGRVFGTIGVVAIVIGI 481 (498)
T ss_pred HHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhh-hhhhhHHHHHHHHHHHHH
Confidence 999999999999999999999988899999998888888888888777422 222 455666666666665333
|
|
| >PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.01 Score=56.71 Aligned_cols=150 Identities=17% Similarity=0.215 Sum_probs=112.4
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHh----------hhHHHHHHHHHHHHH
Q 013044 90 DLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA----------PDFIIMVVGRFVFGI 159 (451)
Q Consensus 90 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~----------~~~~~l~~~r~l~G~ 159 (451)
+.++...|.+..+..++..++..+...+.-+..-|+++....++.++..+..... ++.+..+.--++..+
T Consensus 251 ~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~ 330 (433)
T PF03092_consen 251 HFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEV 330 (433)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHH
Confidence 4889999999999999999999999988888888999988888877766653321 222333444567777
Q ss_pred HHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhccccc-------chhHHHhhhHHHHHHHHHHhh
Q 013044 160 GIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVA-------GWRYMYGASTPLAVIMGMGMW 232 (451)
Q Consensus 160 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~-------~wr~~f~~~~~~~~~~~~~~~ 232 (451)
..+..+-....+++|..|+..-|...++..+..++|..++..++..+.+..+ +-.+..++..+..++.+....
T Consensus 331 ~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~ 410 (433)
T PF03092_consen 331 IGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLF 410 (433)
T ss_pred HHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHH
Confidence 7777777788899999999999999999999999999999999998876431 223444555555555555555
Q ss_pred cccCchH
Q 013044 233 WLPASPR 239 (451)
Q Consensus 233 ~~~e~~~ 239 (451)
++|+..+
T Consensus 411 lLp~~~~ 417 (433)
T PF03092_consen 411 LLPPQKR 417 (433)
T ss_pred HcCCCch
Confidence 6676543
|
Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus). |
| >KOG3098 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.032 Score=52.72 Aligned_cols=101 Identities=20% Similarity=0.318 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHhhhhh---hhcchHHHHHHHHHHHHHHHHHHHh------------------hhHHHHHHHHHHHHHHHh
Q 013044 104 LYGALIGSILAFNIAD---ILGRRRELILAALLYLVGALVTALA------------------PDFIIMVVGRFVFGIGIG 162 (451)
Q Consensus 104 ~~~~~~~~~~~g~l~d---r~Grr~~~~~~~~l~~~~~~~~~~~------------------~~~~~l~~~r~l~G~~~~ 162 (451)
.++..++..+.+.+++ ++||++.+.++..+..++.++.-.. +++....+.-++.|++-+
T Consensus 289 g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~ 368 (461)
T KOG3098|consen 289 GLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDA 368 (461)
T ss_pred hHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHH
Confidence 3444445555666664 5899999999999988888887653 135577788899999999
Q ss_pred hhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhh
Q 013044 163 LAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSL 205 (451)
Q Consensus 163 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~ 205 (451)
......+.++.+.. +++|..+.++...-..++.+++......
T Consensus 369 ~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 369 CFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPY 410 (461)
T ss_pred HHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 99999999999999 5888999999988888888776655443
|
|
| >PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1 | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0047 Score=58.11 Aligned_cols=120 Identities=15% Similarity=0.135 Sum_probs=95.1
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHh------h----hHHHHHHHHHHHH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA------P----DFIIMVVGRFVFG 158 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~------~----~~~~l~~~r~l~G 158 (451)
-|+++..+|..-+...+....+.+...++.+|+|..|.=++++....++..++..+ + +...++.+-++.=
T Consensus 288 ~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR 367 (432)
T PF06963_consen 288 QGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSR 367 (432)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHH
Confidence 48999999999999999999999999999999999988888777665554444321 2 3344555555555
Q ss_pred HHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcc
Q 013044 159 IGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD 208 (451)
Q Consensus 159 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~ 208 (451)
+|.=+...+..-++.|..|+++||...|.-.+..++-.++...++-.+.+
T Consensus 368 ~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~~ 417 (432)
T PF06963_consen 368 IGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIFPR 417 (432)
T ss_pred HHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 66656777888899999999999999999999999888888777665543
|
It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane |
| >PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.023 Score=51.31 Aligned_cols=57 Identities=16% Similarity=0.092 Sum_probs=48.7
Q ss_pred HHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHHH
Q 013044 333 SILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFL 390 (451)
Q Consensus 333 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~ 390 (451)
.+++++|+ +..+.+.+.........+...+.|.+.||+|||+.-+..+++..++++.
T Consensus 59 ~LY~~yg~-~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~ 115 (354)
T PF05631_consen 59 ALYESYGF-SEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLT 115 (354)
T ss_pred HHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Confidence 34578899 8999999999999999999999999999999999887777777766653
|
|
| >KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0053 Score=56.72 Aligned_cols=148 Identities=17% Similarity=0.063 Sum_probs=98.4
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcc-hHHHHHHHHHHHHHHHHHHHh----hhHHHHHHHHHHHHHHHhhh
Q 013044 90 DLSSVEIGLITSGSLYGALIGSILAFNIADILGR-RRELILAALLYLVGALVTALA----PDFIIMVVGRFVFGIGIGLA 164 (451)
Q Consensus 90 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~~~~~~~~l~~~~~~~~~~~----~~~~~l~~~r~l~G~~~~~~ 164 (451)
+.+....|++.....++.++++.+.|.+.||... |.++++......++.+..... .+.+.+...-.+.|++..+.
T Consensus 297 gY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~ 376 (480)
T KOG2563|consen 297 GYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGY 376 (480)
T ss_pred cCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCC
Confidence 4455788999999999999999999999999864 666666666666664322222 23456667778889988889
Q ss_pred hhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhccccc--chhHHHhhh-HHHHHHHHHHhhcccCc
Q 013044 165 MHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVA--GWRYMYGAS-TPLAVIMGMGMWWLPAS 237 (451)
Q Consensus 165 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~--~wr~~f~~~-~~~~~~~~~~~~~~~e~ 237 (451)
.|...-+-.|..-|..-+.-.|+......+-..+-..+.+...+..+ +|.++.-+. ...+++..++..+++|+
T Consensus 377 ~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~ 452 (480)
T KOG2563|consen 377 LPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPD 452 (480)
T ss_pred CCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhh
Confidence 99999888888866666777777766655555555666666655431 344433333 33333344444455444
|
|
| >PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.02 Score=39.99 Aligned_cols=68 Identities=19% Similarity=0.049 Sum_probs=58.3
Q ss_pred HHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHHHHHHh
Q 013044 326 SVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSY 394 (451)
Q Consensus 326 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~ 394 (451)
.+.-.+|...++.++ |..+++++.+...++.++|.+...++.++.++++.+..+.+...+....+++.
T Consensus 10 ayTplLP~M~~~~~l-s~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 10 AYTPLLPLMQADGGL-SLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred HHHhHhHHHHHhcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 344467878888888 99999999999999999999999999999888888888888888888777653
|
Note that many members are hypothetical proteins. |
| >PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS) | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.02 Score=49.06 Aligned_cols=56 Identities=11% Similarity=0.042 Sum_probs=37.0
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHhhhhcc----cccchhHHHhhhHHHHHHHHHHhhcc
Q 013044 179 PMRGQLISLKEFFIVLGMVGGYGIGSLLVD----LVAGWRYMYGASTPLAVIMGMGMWWL 234 (451)
Q Consensus 179 ~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~----~~~~wr~~f~~~~~~~~~~~~~~~~~ 234 (451)
|+|+....+..-++++|.++..+.--.-.+ ...+|++.+.+.+++.++.++++.++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 567777777777888888766544222111 11279999999998887755555544
|
|
| >TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT) | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.084 Score=50.29 Aligned_cols=110 Identities=15% Similarity=0.100 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhcch-HHHHHHHH---HHHHHHHHHHH---------hhhHHHHHHHHHHHHHHHh
Q 013044 96 IGLITSGSLYGALIGSILAFNIADILGRR-RELILAAL---LYLVGALVTAL---------APDFIIMVVGRFVFGIGIG 162 (451)
Q Consensus 96 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr-~~~~~~~~---l~~~~~~~~~~---------~~~~~~l~~~r~l~G~~~~ 162 (451)
.-.....+.++-.+|..+..+.. .-++| +.+.+..+ ++.--.++|.. -++-+..++..++.|+..|
T Consensus 309 ~~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnG 387 (437)
T TIGR00939 309 PIICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNG 387 (437)
T ss_pred HHHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhh
Confidence 34556666777777776544321 11222 13333222 33333344432 2466778888999999999
Q ss_pred hhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhh
Q 013044 163 LAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLL 206 (451)
Q Consensus 163 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l 206 (451)
-....++.+..+..++++|..+..+...+..+|..+|..++-.+
T Consensus 388 y~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 388 YLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988876544
|
|
| >PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.039 Score=43.97 Aligned_cols=94 Identities=14% Similarity=-0.125 Sum_probs=64.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCC
Q 013044 344 SDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFN 423 (451)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (451)
.....-..+......++.++.+.+.+++|.|+.++++.++..+-..... ..+.+..+....+.+.+.+. ..
T Consensus 37 ~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~------~~~~~~l~~~s~l~G~~~a~---lW 107 (156)
T PF05978_consen 37 GLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFF------YPNSYTLYPASALLGFGAAL---LW 107 (156)
T ss_pred cccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHH------hhhHHHHHHHHHHHhhhhHH---hh
Confidence 3445556677777888888999999999999999998887775444321 23456666666676777776 34
Q ss_pred ceeeeeeecchhhhhhhhhhhee
Q 013044 424 PSKIYHFRIFFFEMTRIVCSIYC 446 (451)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~ 446 (451)
...-.++.+...++.+++-.++.
T Consensus 108 ~aqg~ylt~~s~~~~~~~~~~if 130 (156)
T PF05978_consen 108 TAQGTYLTSYSTEETIGRNTGIF 130 (156)
T ss_pred HhhhHHHHHcCCHHHHhhHHHHH
Confidence 44445666667777777766543
|
UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein []. |
| >KOG3097 consensus Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.81 Score=40.91 Aligned_cols=99 Identities=17% Similarity=0.245 Sum_probs=65.3
Q ss_pred HHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCC--CCc-
Q 013044 105 YGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPT--PMR- 181 (451)
Q Consensus 105 ~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~--~~r- 181 (451)
+..+..+++.+.+..++|-|+++.++.......-..- +-+.+..++-+-.+.|+|.+..+..--+|+++.-.. +.|
T Consensus 69 ~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~N-l~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~~~ 147 (390)
T KOG3097|consen 69 LSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAAN-LEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQRG 147 (390)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhh-cchhHHhhccHHHhhccccccccccCcceecHHHHHHHHhhh
Confidence 3444555555588999999999998887776533222 336788899999999999999988877777665532 223
Q ss_pred --------chHHH----HHHHHHHHHHHHHHHHhh
Q 013044 182 --------GQLIS----LKEFFIVLGMVGGYGIGS 204 (451)
Q Consensus 182 --------~~~~~----~~~~~~~~G~~~g~~l~~ 204 (451)
.+..+ +++...-.|..+...+..
T Consensus 148 ~q~~~~~~~~ffg~Ffii~~~~qv~gn~issli~~ 182 (390)
T KOG3097|consen 148 EQAGDGMKVRFFGEFFIIFQCAQVWGNLISSLIMT 182 (390)
T ss_pred hhccCceeeeehhHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444 455555555555444433
|
|
| >KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.0087 Score=56.64 Aligned_cols=105 Identities=14% Similarity=-0.040 Sum_probs=73.1
Q ss_pred HHHH--cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCC-chhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHH
Q 013044 334 ILQS--AGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGR-RPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALL 410 (451)
Q Consensus 334 ~~~~--~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (451)
|+++ .+- +.+..|+......++..+++++.|+...|.+. |+.++.+.++..++.++...+-+......|+++++-+
T Consensus 60 Yl~~lD~~A-~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~ 138 (488)
T KOG2325|consen 60 YLQKLDPTA-TATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARI 138 (488)
T ss_pred hhhhcCCCC-CcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Confidence 3444 455 67788999999999999999999999999986 8888899999999988875554444435566665555
Q ss_pred HHHHhhccccCCCceeeeeeec--chhhhhhhhhh
Q 013044 411 LYVGCYQVIKNFNPSKIYHFRI--FFFEMTRIVCS 443 (451)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 443 (451)
+.+.+.+. ....-.|++. ..++|.|..+.
T Consensus 139 l~Gvg~~n----~a~lR~Y~a~~s~~~dR~rA~a~ 169 (488)
T KOG2325|consen 139 LTGVGVGN----FAVLRAYIADASTVEDRPRAFAA 169 (488)
T ss_pred HcCcCccc----HHHHHHHHHhccCccchHHHHHH
Confidence 55544443 4444455544 55555555443
|
|
| >PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX) | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.065 Score=49.85 Aligned_cols=99 Identities=17% Similarity=0.144 Sum_probs=79.7
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchH--HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHH
Q 013044 92 SSVEIGLITSGSLYGALIGSILAFNIADILGRRR--ELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAP 169 (451)
Q Consensus 92 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~--~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 169 (451)
....-|.+.++..+..+++.+..|++..++.+.. .+.+..++.+...++++..+|.|..+++-++.+.......+.+.
T Consensus 283 ~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~ 362 (412)
T PF01770_consen 283 ESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIAS 362 (412)
T ss_pred CcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445588999999999999999999987777743 44455556666777778889999999999999998888888888
Q ss_pred HHHHhccCCCCcchHHHHHHH
Q 013044 170 MYIAETAPTPMRGQLISLKEF 190 (451)
Q Consensus 170 ~~i~~~~~~~~r~~~~~~~~~ 190 (451)
.-++.....++-|..+|+...
T Consensus 363 ~qIA~~l~~e~yaLVFGiNtf 383 (412)
T PF01770_consen 363 FQIAKNLSEERYALVFGINTF 383 (412)
T ss_pred HHHHHhccccceeeeeeeHHH
Confidence 888888887888888877753
|
Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane |
| >PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.003 Score=57.32 Aligned_cols=95 Identities=14% Similarity=-0.078 Sum_probs=2.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhh-cCCchhhhchhHHHHHHHHHHHHhhhc--------cCCcchHHHHHHHHHHHhhcc
Q 013044 348 RVSILLGLFKLIMTGLAVLVVER-LGRRPLLLGGVSGIVISLFLLGSYYLF--------LDDVPAVAVVALLLYVGCYQV 418 (451)
Q Consensus 348 ~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 418 (451)
.....++++..+|+.+..+..-+ ..+|++... .+.=.+..-++...... .-.+.++.++..++++..-|.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~-s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGy 264 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWIL-SLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHH-HHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccch
Confidence 35668899999999988874322 134444332 11111111111111011 012334455555566666655
Q ss_pred ccCCCceeeeeeecchhhhhhhhhhhee
Q 013044 419 IKNFNPSKIYHFRIFFFEMTRIVCSIYC 446 (451)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (451)
.......+..+..+++.|..+..++
T Consensus 265 ---l~tl~m~~~p~~v~~~e~e~aG~~~ 289 (309)
T PF01733_consen 265 ---LSTLAMMYAPKSVSPEERELAGSVM 289 (309)
T ss_dssp -----HHHH-------------------
T ss_pred ---hhhceeeeCCCcCCHHHHHHHHHHH
Confidence 5666677777777877777766554
|
Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A. |
| >PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.0058 Score=55.43 Aligned_cols=108 Identities=22% Similarity=0.205 Sum_probs=3.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhh-hcchHHHHH--HHHHHHHHHHHH----------HHhhhHHHHHHHHHHHHHHHhhh
Q 013044 98 LITSGSLYGALIGSILAFNIADI-LGRRRELIL--AALLYLVGALVT----------ALAPDFIIMVVGRFVFGIGIGLA 164 (451)
Q Consensus 98 ~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~~--~~~l~~~~~~~~----------~~~~~~~~l~~~r~l~G~~~~~~ 164 (451)
.....+.++-.+|..+.++.--+ -.+|++... .=+++.-..++| .+.+|-+.+++.-++.|+..|-.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 34567888888888877653211 124443332 122222222333 12346678888899999999999
Q ss_pred hhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhh
Q 013044 165 MHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSL 205 (451)
Q Consensus 165 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~ 205 (451)
...++.+..+..++++|..+-.+...+..+|..+|..++-.
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp -HHHH------------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888888888888888877654
|
Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A. |
| >TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) | Back alignment and domain information |
|---|
Probab=92.17 E-value=0.87 Score=45.89 Aligned_cols=104 Identities=15% Similarity=0.043 Sum_probs=64.9
Q ss_pred hHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhh-cCCchhhhchhHHHHHHHHHHHHhhhccCCc---chHH
Q 013044 330 YAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVER-LGRRPLLLGGVSGIVISLFLLGSYYLFLDDV---PAVA 405 (451)
Q Consensus 330 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 405 (451)
+..++.+..++ +...+..+...+....-+..+++|+++|+ +|+++.+.++.++..++..++.+........ ....
T Consensus 10 LvlYl~~~lg~-~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~ 88 (654)
T TIGR00926 10 LVLYFLNFLGF-SESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLD 88 (654)
T ss_pred HHHHHHHHcCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHH
Confidence 33344455788 77777777777777777788899999996 6999999999998888887776432211111 1223
Q ss_pred HHHHHHHHHhhccccCCCceeeeeeecchhhh
Q 013044 406 VVALLLYVGCYQVIKNFNPSKIYHFRIFFFEM 437 (451)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (451)
++.+.+..++.+. .-|.......+-++++
T Consensus 89 l~gLaLia~G~Gg---iKp~vsaf~gdqf~~~ 117 (654)
T TIGR00926 89 LLGLALIALGTGG---IKPCVSAFGGDQFEER 117 (654)
T ss_pred HHHHHHHHhhccc---cccCchhhhHhhcCcc
Confidence 3334444444443 4555556665555543
|
|
| >KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.99 E-value=2.8 Score=39.03 Aligned_cols=111 Identities=20% Similarity=0.088 Sum_probs=75.8
Q ss_pred CchhHHHHHHH-HHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHH---------HhhhHHHHHHHHHHHHHHH
Q 013044 92 SSVEIGLITSG-SLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTA---------LAPDFIIMVVGRFVFGIGI 161 (451)
Q Consensus 92 s~~~~g~~~s~-~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~---------~~~~~~~l~~~r~l~G~~~ 161 (451)
++...-.+..+ +.+.-.+|.+.+.++-++ +||+. .+..++-.+..-+.. +-.+-+++++...+.|+..
T Consensus 280 ~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~-~~r~l-~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsn 357 (406)
T KOG1479|consen 280 GDWYALLLVFLSFNVFDLIGSILAALLTWP-DPRKL-TIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSN 357 (406)
T ss_pred chhhHHHHHHHHhHHHHHhhhhhhhcccCC-CCcee-hHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhcc
Confidence 34444555566 888888887766666554 33333 333333322222222 2356688899999999999
Q ss_pred hhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhh
Q 013044 162 GLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGS 204 (451)
Q Consensus 162 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~ 204 (451)
|=.....+.+..+-.+++++-.+-.+.......|..+|..++.
T Consensus 358 GYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~ 400 (406)
T KOG1479|consen 358 GYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSW 400 (406)
T ss_pred chHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 9888888888888888888888877888888888888777654
|
|
| >KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.90 E-value=0.059 Score=47.33 Aligned_cols=138 Identities=14% Similarity=0.056 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhc
Q 013044 96 IGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAET 175 (451)
Q Consensus 96 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 175 (451)
.|.+.-+-.+-..+..+......||+.--.=+.+..++.+.+..+.+++++.++-+++-.+..++.|.....-..+-+.
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~- 142 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSR- 142 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhcc-
Confidence 3444445556666666777777888654333455677888889999999999999999999988888776655554333
Q ss_pred cCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcc-cccchhHHHhhhHHHHHHHHHHhhcccCch
Q 013044 176 APTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD-LVAGWRYMYGASTPLAVIMGMGMWWLPASP 238 (451)
Q Consensus 176 ~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~-~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~ 238 (451)
+++ ...+-+..+.+.+..+|..-=..+.+ ....-|...++...+-++....++++-++|
T Consensus 143 Y~~----~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~p 202 (409)
T KOG3880|consen 143 YPS----IVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSP 202 (409)
T ss_pred CCC----ceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCC
Confidence 332 23334444444444444443333333 112567777777777666555555543333
|
|
| >COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=91.34 E-value=0.95 Score=40.42 Aligned_cols=111 Identities=18% Similarity=0.020 Sum_probs=65.5
Q ss_pred HHHhHHHHHHHcCCCCc--hhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchH
Q 013044 327 VLYYAASILQSAGFSAA--SDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAV 404 (451)
Q Consensus 327 ~~~~~~~~~~~~~~~s~--~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (451)
.....+.+..+.+. +. ...+.......+...++.++.|.+.||.|||+.+..+.....++.+...... ....+.
T Consensus 21 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 96 (338)
T COG0477 21 LSPALPLLLSTLSL-SSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAP---NVGLAL 96 (338)
T ss_pred HHHHHHHHHHHcCC-CchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCc---cchHHH
Confidence 33445555555554 33 4678888888899999989999999999999777766654333322222211 112233
Q ss_pred HHHHHHHHHHhhccccCCCceeeeeeecchhh-hhhhhhhh
Q 013044 405 AVVALLLYVGCYQVIKNFNPSKIYHFRIFFFE-MTRIVCSI 444 (451)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 444 (451)
..+.....+.+.+. ..+....+..+..|+ +.|+...+
T Consensus 97 ~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 134 (338)
T COG0477 97 LLILRLLQGLGGGG---LLPVASALLSEWFPEATERGLAVG 134 (338)
T ss_pred HHHHHHHHHhhhHH---HHHHHHHHHHHhcCchhHHHHHHH
Confidence 33333332333332 456667777777776 44555444
|
|
| >KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.86 E-value=5.2 Score=34.97 Aligned_cols=131 Identities=15% Similarity=0.170 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhcch--HHHHHHHHHHHHHHHHHHHh----h---hHHHHHHHHHHHHHHHhhhhh
Q 013044 96 IGLITSGSLYGALIGSILAFNIADILGRR--RELILAALLYLVGALVTALA----P---DFIIMVVGRFVFGIGIGLAMH 166 (451)
Q Consensus 96 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr--~~~~~~~~l~~~~~~~~~~~----~---~~~~l~~~r~l~G~~~~~~~~ 166 (451)
-|.+.+.++++.++|+-+..++..|-..| ..+.+..++.+....+..+. + +...=+++-.+.-.+.|..+|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 48899999999999999988887764443 44444444444443333322 2 233335566677778899999
Q ss_pred hHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHH
Q 013044 167 AAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIM 227 (451)
Q Consensus 167 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~ 227 (451)
..+.+=+++.|.+.|...+.++..-.++-..++...--.- +...+=|.+|-++.+...+.
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~-~~p~~tr~mf~icS~~~~~a 423 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVD-AFPTTTRNMFGICSAFLFVA 423 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccc-cCccccchhhhhhHHHHHHH
Confidence 9999999999999999999988766655444432211000 11125678888877766654
|
|
| >KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.75 E-value=0.21 Score=46.70 Aligned_cols=130 Identities=16% Similarity=-0.023 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhcc
Q 013044 97 GLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETA 176 (451)
Q Consensus 97 g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 176 (451)
.|-..++.+...+.+....++.||+|-|+.++.+...+.++..+.+..++.+....-|-..|+-.+....+-...++++.
T Consensus 335 ~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~ 414 (498)
T KOG0637|consen 335 CLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALALYA 414 (498)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHHHH
Confidence 45567788888899999999999999888878888778888888888888888888888888655555444444444332
Q ss_pred C---------------------C--CCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHH
Q 013044 177 P---------------------T--PMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (451)
Q Consensus 177 ~---------------------~--~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~ 226 (451)
. + ..+|...|+.+....+.+++..+..|.+.+..++=+.+-+..+.+++.
T Consensus 415 ~~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~~~~~~~~a~s~~ 487 (498)
T KOG0637|consen 415 ILGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGNLPAFVSGAVALL 487 (498)
T ss_pred HhCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcchhHHHHHHHHHH
Confidence 1 1 124666777888888888888777777777665666666666665555
|
|
| >KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.10 E-value=0.27 Score=43.42 Aligned_cols=108 Identities=14% Similarity=0.014 Sum_probs=78.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhhcchH------HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhh
Q 013044 94 VEIGLITSGSLYGALIGSILAFNIADILGRRR------ELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHA 167 (451)
Q Consensus 94 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~------~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 167 (451)
.|.-|....|.+|..+.. -+-|+=+-+ ++-.-.+++.+...+..+.+++|...+.-+..|+-.|..++.
T Consensus 288 sqYRwyqvlYQlGVFiSR-----SS~~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVN 362 (409)
T KOG3880|consen 288 SQYRWYQVLYQLGVFISR-----SSINLFTMPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVN 362 (409)
T ss_pred hcchhhheeeeeeEEEEe-----ccceEEechHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHH
Confidence 456788888887754332 122221211 222333445555566667899999999999999998888888
Q ss_pred HHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhh
Q 013044 168 APMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLL 206 (451)
Q Consensus 168 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l 206 (451)
..--+.+-.++++|-.+++....+-++|..++.+++-.+
T Consensus 363 Tf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 363 TFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 888888888999999999999999999998888776654
|
|
| >PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS) | Back alignment and domain information |
|---|
Probab=89.91 E-value=6.8 Score=34.07 Aligned_cols=103 Identities=11% Similarity=0.021 Sum_probs=57.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhh-hhcchHHHH----HHHHHHHHHHHHHHH-h----hhHHHHHHHHHHHHHHHhhh
Q 013044 95 EIGLITSGSLYGALIGSILAFNIAD-ILGRRRELI----LAALLYLVGALVTAL-A----PDFIIMVVGRFVFGIGIGLA 164 (451)
Q Consensus 95 ~~g~~~s~~~~~~~~~~~~~g~l~d-r~Grr~~~~----~~~~l~~~~~~~~~~-~----~~~~~l~~~r~l~G~~~~~~ 164 (451)
......-++..|..+|.+..|.++. ++.||+.+. .++++..+..++... . .++..+++.-++.|+..=+.
T Consensus 142 ~~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~Wgi 221 (267)
T PF07672_consen 142 IIPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGI 221 (267)
T ss_pred hhHHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhh
Confidence 3355566677777788888888886 466776654 344555555444211 1 13667888888888876445
Q ss_pred hhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHH
Q 013044 165 MHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVG 198 (451)
Q Consensus 165 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 198 (451)
.++....=.|+= ..++.+.--.++..+++|.+.
T Consensus 222 Q~ViL~lPhEyK-~~~pk~ig~~Fg~iWGfGY~~ 254 (267)
T PF07672_consen 222 QGVILNLPHEYK-GYNPKKIGIQFGLIWGFGYIF 254 (267)
T ss_pred hHHHhcChhhhc-CCCcceehhHHHHHHHHHHHH
Confidence 554443333332 222233333344456666554
|
|
| >PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs) | Back alignment and domain information |
|---|
Probab=87.86 E-value=0.13 Score=50.40 Aligned_cols=135 Identities=10% Similarity=-0.069 Sum_probs=0.6
Q ss_pred HHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHHHHHHh
Q 013044 315 LVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSY 394 (451)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~ 394 (451)
+..+.+.........-.+.+-+++++ +..+.|++.+..-++.++..++..++.+|-+|-+.+-.|.++++++.+++++-
T Consensus 10 ~~~~~q~~~~g~~~~~lttiErRF~l-~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lP 88 (539)
T PF03137_consen 10 LLGLFQMMVSGYVNSSLTTIERRFGL-SSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALP 88 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhcc
Confidence 33333333333444445566667899 89999999999999999999999999999888888888888888887776532
Q ss_pred hhccC-----------------------------------------CcchHHHHHHHHHHHhhcccc-CCCceeeeeeec
Q 013044 395 YLFLD-----------------------------------------DVPAVAVVALLLYVGCYQVIK-NFNPSKIYHFRI 432 (451)
Q Consensus 395 ~~~~~-----------------------------------------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 432 (451)
-+... ...+.....+++.....|+.. ..+++..+|++|
T Consensus 89 hf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDD 168 (539)
T PF03137_consen 89 HFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDD 168 (539)
T ss_dssp ---------------------------------------------------------------SSS--------------
T ss_pred HhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecc
Confidence 21100 001111122222222222200 467777899999
Q ss_pred chhhhhhhhhhheeeeec
Q 013044 433 FFFEMTRIVCSIYCAKLR 450 (451)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~ 450 (451)
-++++..+...|+..+++
T Consensus 169 nv~~~~splYiGi~~~~~ 186 (539)
T PF03137_consen 169 NVSKKNSPLYIGILYAMS 186 (539)
T ss_dssp ------------------
T ss_pred ccccccCccchhhhhHHh
Confidence 999998888877766553
|
Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P. |
| >KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.52 E-value=3.2 Score=37.70 Aligned_cols=110 Identities=15% Similarity=0.154 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhcch--HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHH
Q 013044 96 IGLITSGSLYGALIGSILAFNIADILGRR--RELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIA 173 (451)
Q Consensus 96 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr--~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 173 (451)
-|-.-++..+..+++.+..|.+.-++.|. ..+.++.+..+...++++-++++|..+++.++.+.-.....+.+..-++
T Consensus 273 NG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA 352 (433)
T KOG3810|consen 273 NGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIA 352 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHH
Confidence 36667777888899999999998877665 4455566666667777777889999999999988888888888888899
Q ss_pred hccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcc
Q 013044 174 ETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD 208 (451)
Q Consensus 174 ~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~ 208 (451)
+....+.-|..+|+... ++.++-.++.....+
T Consensus 353 ~nL~~e~~gLvFGiNTF---vAl~lQsilT~iVvd 384 (433)
T KOG3810|consen 353 RNLSSELFGLVFGINTF---VALILQSILTLIVVD 384 (433)
T ss_pred HhhhhhhheeeeehHHH---HHHHHHHhheEEEEc
Confidence 98888888888888753 344455555555554
|
|
| >PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length | Back alignment and domain information |
|---|
Probab=84.32 E-value=24 Score=29.80 Aligned_cols=48 Identities=21% Similarity=0.250 Sum_probs=23.8
Q ss_pred hccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHH
Q 013044 174 ETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPL 223 (451)
Q Consensus 174 ~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~ 223 (451)
|+...+++.+.-.......-++..+|..+++.+.+.. +. +..++.+++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~~~-~~-~al~~~~~~ 200 (209)
T PF06912_consen 153 RYLRGKDRALRRALRYLLIILSFFIGAILGALLYRRL-GF-WALLLPALL 200 (209)
T ss_pred HHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hh-HHHHHHHHH
Confidence 3333343333334445555566666666666666554 54 333333333
|
The function of this family is unknown although a few members are thought to be membrane proteins. |
| >PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [] | Back alignment and domain information |
|---|
Probab=83.90 E-value=33 Score=31.11 Aligned_cols=35 Identities=11% Similarity=0.085 Sum_probs=19.1
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHHH-HHHhccCCCC
Q 013044 146 DFIIMVVGRFVFGIGIGLAMHAAPM-YIAETAPTPM 180 (451)
Q Consensus 146 ~~~~l~~~r~l~G~~~~~~~~~~~~-~i~~~~~~~~ 180 (451)
+...-.+--.+.+++.|....++.. ++.|....++
T Consensus 259 ~~~~~~~~~~~~a~aaG~~lyv~~~ell~~~~~~~~ 294 (317)
T PF02535_consen 259 SSSSDIVSGILLAFAAGTFLYVAFVELLPEEFHNKH 294 (317)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 4444555567778877766544433 4455554333
|
; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane |
| >PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ] | Back alignment and domain information |
|---|
Probab=83.74 E-value=19 Score=34.71 Aligned_cols=120 Identities=18% Similarity=0.152 Sum_probs=77.4
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchH-----------------------------HHHHHHHHHHHHHH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRR-----------------------------ELILAALLYLVGAL 139 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~-----------------------------~~~~~~~l~~~~~~ 139 (451)
.|++.++.+.+.-+..=..++.....|+++. |+++ ..+.+...-.+..+
T Consensus 308 kG~~KE~LAl~~li~~P~qii~~~~~~Kws~--g~~P~~~~~~~l~~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL~~a~ 385 (544)
T PF13000_consen 308 KGLSKEDLALLVLIDFPFQIILPYYIGKWSA--GSPPLDVDNKALPNFSRANKIIRLLVGDAGALRPWLWAFWGRLVAAL 385 (544)
T ss_pred cCCCHHHhHHHHHHhhhHHHHHHHHhhhhhc--CCCccccccccccccccccchhhhhhccchhhHHHHHHHHHHHHHHH
Confidence 5899999988876666666666666666654 3331 11222222112222
Q ss_pred HHHH----hh-------h-HHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhc
Q 013044 140 VTAL----AP-------D-FIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLV 207 (451)
Q Consensus 140 ~~~~----~~-------~-~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~ 207 (451)
+... .+ . +..+++..++.-+..-..+....++-+...+|.--|+.|.+++...++|.---..+.-+++
T Consensus 386 l~~~iV~~fP~~g~v~~~Yf~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lV 465 (544)
T PF13000_consen 386 LAQLIVYFFPSDGPVPTYYFLLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLV 465 (544)
T ss_pred HHHheEEeCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHh
Confidence 2111 12 1 2344555677888888889999999999999999999999999999998655555555555
Q ss_pred ccc
Q 013044 208 DLV 210 (451)
Q Consensus 208 ~~~ 210 (451)
+..
T Consensus 466 D~f 468 (544)
T PF13000_consen 466 DYF 468 (544)
T ss_pred hhc
Confidence 543
|
This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane |
| >COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only] | Back alignment and domain information |
|---|
Probab=82.70 E-value=25 Score=32.17 Aligned_cols=85 Identities=22% Similarity=0.257 Sum_probs=58.8
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHH----HHHH-HHh----hhHHHHHHHHHHHHHH
Q 013044 90 DLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVG----ALVT-ALA----PDFIIMVVGRFVFGIG 160 (451)
Q Consensus 90 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~----~~~~-~~~----~~~~~l~~~r~l~G~~ 160 (451)
|-+--|.+.+.+.|.+...+|+...-++.|.--.-+.+.+-.++..++ .++. .|+ ++-+.++++-++.|.-
T Consensus 39 G~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~L 118 (508)
T COG4262 39 GGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVL 118 (508)
T ss_pred CCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 556678899999999999999998888877543333332222222221 1111 233 4567888889999999
Q ss_pred HhhhhhhHHHHHHh
Q 013044 161 IGLAMHAAPMYIAE 174 (451)
Q Consensus 161 ~~~~~~~~~~~i~~ 174 (451)
.|.-.|..+.++..
T Consensus 119 VG~EiPL~mrml~~ 132 (508)
T COG4262 119 VGAEIPLLMRMLQR 132 (508)
T ss_pred HhcchHHHHHHHHH
Confidence 99999999988876
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 451 | ||||
| 4gby_A | 491 | The Structure Of The Mfs (Major Facilitator Superfa | 1e-15 |
| >pdb|4GBY|A Chain A, The Structure Of The Mfs (Major Facilitator Superfamily) Proton:xylose Symporter Xyle Bound To D-Xylose Length = 491 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 55.2 bits (132), Expect = 3e-08
Identities = 44/283 (15%), Positives = 85/283 (30%), Gaps = 70/283 (24%)
Query: 180 MRGQLISLK-EFFIVL-GMVGGYGIG-SLLVDLVAGWRYMYGASTPLAVIMGMGMWWL-- 234
+R L+ L+ +++ G++G G + + V S + M ++WL
Sbjct: 140 LRQALLELRPAKNVLIDGVLG---SGKTWVALDVC-------LSYKVQCKMDFKIFWLNL 189
Query: 235 --PASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGED 292
SP +L M +Q L + + I EL + +
Sbjct: 190 KNCNSPETVL--EM-----LQKLLYQIDPNWTSR--SDHSSNIKLRIHSIQAELRRLLKS 240
Query: 293 KE-----VSLREVFHGKCLKALIIGAGLVL---FQQITGQPSVLYYAASIL--QSAGFSA 342
K + L V + K A + ++L F+Q+T S L S +
Sbjct: 241 KPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTP 300
Query: 343 ASDATRVSILLGLF-KLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDV 401
+ L K + L E L P L ++ + +
Sbjct: 301 DE-------VKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNW------ 347
Query: 402 PAVAVVALLLYVGCYQV-------IKNFNPS---KIYH-FRIF 433
+V C ++ + P+ K++ +F
Sbjct: 348 ---------KHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVF 381
|
| >3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Length = 438 | Back alignment and structure |
|---|
Score = 48.0 bits (114), Expect = 4e-06
Identities = 29/122 (23%), Positives = 52/122 (42%), Gaps = 3/122 (2%)
Query: 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALV---TALAP 145
+ L++ + GLI S +G I I A + L + +I LY +GA + A
Sbjct: 56 FTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIM 115
Query: 146 DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSL 205
++ + +VG F+ G+G AA ++ P ++L + F G + G
Sbjct: 116 NYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQS 175
Query: 206 LV 207
L+
Sbjct: 176 LI 177
|
| >2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Length = 375 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 7e-06
Identities = 24/124 (19%), Positives = 42/124 (33%), Gaps = 13/124 (10%)
Query: 117 IADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETA 176
I+D +GRR +++ ++++ LV +++ + G+G G+ A +
Sbjct: 58 ISDRVGRRPVILVGMSIFMLATLVAVTTSSLTVLIAASAMQGMGTGVGGVMARTLPRDLY 117
Query: 177 PTPMRGQLISLKEFFIVLGMVGGYG------IGSLLVDLVAGWRYMYGASTPLAVIMGMG 230
SL L M IG LL + WR Y L +
Sbjct: 118 ERTQLRHANSL------LNMGILVSPLLAPLIGGLLD-TMWNWRACYLFLLVLCAGVTFS 170
Query: 231 MWWL 234
M
Sbjct: 171 MARW 174
|
| >1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Length = 451 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 1e-04
Identities = 33/215 (15%), Positives = 65/215 (30%), Gaps = 16/215 (7%)
Query: 39 RPSPENYSVSAAILPFLFP-----ALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSS 93
+P+P + AA + + G+ +GY ++ P L S
Sbjct: 5 KPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLV---EQGFSR 61
Query: 94 VEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPD----FII 149
++G SG + +++D R L +L L P +
Sbjct: 62 GDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAV 121
Query: 150 MVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL 209
M V F+ G G+ + RG ++S+ +G + L +
Sbjct: 122 MFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAW 181
Query: 210 VAGWRYMYGASTPLAVIMGMGMWWL----PASPRW 240
W A+++ + + + P S
Sbjct: 182 FNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGL 216
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 451 | |||
| 4gc0_A | 491 | D-xylose-proton symporter; MFS, transport protein; | 100.0 | |
| 1pw4_A | 451 | Glycerol-3-phosphate transporter; transmembrane, i | 100.0 | |
| 3o7q_A | 438 | L-fucose-proton symporter; transporter, multi-PASS | 100.0 | |
| 2gfp_A | 375 | EMRD, multidrug resistance protein D; membrane pro | 99.97 | |
| 4aps_A | 491 | DI-OR tripeptide H+ symporter; transport protein, | 99.97 | |
| 2xut_A | 524 | Proton/peptide symporter family protein; transport | 99.91 | |
| 2cfq_A | 417 | Lactose permease; transport, transport mechanism, | 99.91 | |
| 1pw4_A | 451 | Glycerol-3-phosphate transporter; transmembrane, i | 99.55 | |
| 2cfq_A | 417 | Lactose permease; transport, transport mechanism, | 99.45 | |
| 3o7q_A | 438 | L-fucose-proton symporter; transporter, multi-PASS | 99.4 | |
| 4aps_A | 491 | DI-OR tripeptide H+ symporter; transport protein, | 99.35 | |
| 4gc0_A | 491 | D-xylose-proton symporter; MFS, transport protein; | 99.31 | |
| 2gfp_A | 375 | EMRD, multidrug resistance protein D; membrane pro | 98.98 | |
| 2xut_A | 524 | Proton/peptide symporter family protein; transport | 98.79 |
| >4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-40 Score=321.92 Aligned_cols=385 Identities=30% Similarity=0.498 Sum_probs=302.3
Q ss_pred CccchHHHHHHHHHHHhhhhhcccccccccccccccCCCCCC-cccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 013044 44 NYSVSAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSG-ISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILG 122 (451)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G 122 (451)
+++.+..+.+.++.+++.+++|||.++++..+|.+.++.... +...+.+..+.|++.+++.+|..+|++++|+++||+|
T Consensus 4 ~~~~~y~~~i~~~a~lg~~~~Gyd~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~G~~iG~~~~G~laDr~G 83 (491)
T 4gc0_A 4 QYNSSYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFG 83 (491)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHHGGGGTHHHHHHHHTGGGCCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTC
T ss_pred CcChHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 455667777777788999999999999999998876542111 0001345677899999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHH------------------HhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchH
Q 013044 123 RRRELILAALLYLVGALVTA------------------LAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQL 184 (451)
Q Consensus 123 rr~~~~~~~~l~~~~~~~~~------------------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 184 (451)
||++++++.+++.+++++++ +++|+++++++|+++|+|.|+..+...++++|+.|+++|++.
T Consensus 84 Rk~~l~~~~~l~~i~~i~~a~~~~~~~~~~~~~~~~~~~a~~~~~l~~~R~l~G~g~G~~~~~~~~~i~E~~p~~~rg~~ 163 (491)
T 4gc0_A 84 RRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKL 163 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTTTTSCSSSSSSCCGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhhhhhhcchhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHhhhhh
Confidence 99999999999999999999 478999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhccc-------ccchhHHHhhhHHHHHHHHHHhhcccCchHHHHHhhccccCCccchHH
Q 013044 185 ISLKEFFIVLGMVGGYGIGSLLVDL-------VAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRE 257 (451)
Q Consensus 185 ~~~~~~~~~~G~~~g~~l~~~l~~~-------~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 257 (451)
.++.+.+..+|.++++.++..+... ..+||+.+.+..+..++.++..+++||+|+|+..++ +.+
T Consensus 164 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~peSp~~L~~~~---------~~~ 234 (491)
T 4gc0_A 164 VSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMSRG---------KQE 234 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTTTTHHHHHHHTTHHHHHHHHHHGGGSCCCHHHHHHTT---------CHH
T ss_pred HHhhhhhhhhhhhhhhhcchhhccccccccccchhhHHHhhhhhhhhhhhhhhhhcCCCChHHHHHcC---------chh
Confidence 9999999999999999988876542 126899999999998888888899999999999887 667
Q ss_pred HHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHH
Q 013044 258 SAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS 337 (451)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (451)
++.+.+++..+....+++ ..+..+..+ ++++....... ...++..+......+.++.+.+.+.+|.+.+.+.
T Consensus 235 ~a~~~l~~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (491)
T 4gc0_A 235 QAEGILRKIMGNTLATQA---VQEIKHSLD--HGRKTGGRLLM---FGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKT 306 (491)
T ss_dssp HHHHHHHHHHHHHHHHHH---HHHHHHHHH--HHHHHTTHHHH---SCCTHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHhHHHhcCCchhHHH---HHHHHHHHH--hhhhhhhHHHH---hcccHHHHHHHHHHHHHHhhhhHHHhcchHHHHh
Confidence 777766665432211110 000000000 00111111112 2235566667777788888888999999999998
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhc
Q 013044 338 AGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQ 417 (451)
Q Consensus 338 ~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (451)
.+. +...........++..+++.++.+++.||+|||+.++.+.....++++.++..... ....+..++..+++..+++
T Consensus 307 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~dr~Grr~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~ 384 (491)
T 4gc0_A 307 LGA-STDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYT-QAPGIVALLSMLFYVAAFA 384 (491)
T ss_dssp SSC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHH
T ss_pred cCC-CccchhhHHHHHHHHHHHHHHHHHHHHHhhcCcchhccchHHHHHHHHHHHHHHhc-ccchHHHHHHHHHHHHHHH
Confidence 888 77778888888999999999999999999999999999888888887777655443 2334455556666677777
Q ss_pred cccCCCceeeeeeecchhhhhhhhhhheeeee
Q 013044 418 VIKNFNPSKIYHFRIFFFEMTRIVCSIYCAKL 449 (451)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (451)
. ++.|+.+.+.+|++|++.|+++.++++++
T Consensus 385 ~--~~~~~~~~~~~E~fPt~~R~~~~g~~~~~ 414 (491)
T 4gc0_A 385 M--SWGPVCWVLLSEIFPNAIRGKALAIAVAA 414 (491)
T ss_dssp T--TTTHHHHHHHHHSSCTTTHHHHHHHHHHH
T ss_pred h--HHHHHHHHHHHHhCCHhHHHHHHHHHHHH
Confidence 7 78899999999999999999999987654
|
| >1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-35 Score=281.99 Aligned_cols=357 Identities=13% Similarity=0.022 Sum_probs=264.5
Q ss_pred hHHHHHHHHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHH
Q 013044 48 SAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRREL 127 (451)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~ 127 (451)
+..+..+...+++.+..+++...+.+.+|.+.++ + .+..+.|++.+++.++..++++++|+++||+|||+++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l 95 (451)
T 1pw4_A 24 RLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-------G-FSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFL 95 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSHHHHHHHTTSS-------T-TCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------h-ccHhHHHHHHHHHHHHHHHHHHhHHHHHHhcCchHHH
Confidence 3445566777788888888989999999999988 8 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH----hhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHh
Q 013044 128 ILAALLYLVGALVTAL----APDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIG 203 (451)
Q Consensus 128 ~~~~~l~~~~~~~~~~----~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~ 203 (451)
+++.++.+++.+++++ ++|++.++++|+++|++.+...+...+++.|++|+++|++++++.+.+..+|.+++|.++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 175 (451)
T 1pw4_A 96 PAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLF 175 (451)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHSSSSHHHHHHHHHHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhhccccHHHHHHHHHHHHHHhhhccchHHHHHHHHCCchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccccc-hhHHHhhhHHHHHH-HHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHH
Q 013044 204 SLLVDLVAG-WRYMYGASTPLAVI-MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDE 281 (451)
Q Consensus 204 ~~l~~~~~~-wr~~f~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (451)
+.+.+.. + ||+.|++.+++.++ .++..+++||+|+....++ +.+.....++ +.++
T Consensus 176 ~~l~~~~-g~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-------------------~~~~ 232 (451)
T 1pw4_A 176 LLGMAWF-NDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPP---IEEYKNDYPD-------------------DYNE 232 (451)
T ss_dssp HHHHHHT-CCSTTCTHHHHHHHHHHHHHHHHHCCCSSTTTCCCS---CTTTCCC--------------------------
T ss_pred HHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhhccCCHhhcCCCC---hhhhcccccc-------------------cchh
Confidence 9988776 7 99999999988877 4455567888775311100 0000000000 0000
Q ss_pred HHHhhcccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHH-cCCCCchhHHHHHHHHHHHHHHH
Q 013044 282 ILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKLIM 360 (451)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~ 360 (451)
..++....++...+++++++..+...+ ..+...........+.|.++++ .|+ +..+.+.......++.+++
T Consensus 233 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~ 304 (451)
T 1pw4_A 233 ---KAEQELTAKQIFMQYVLPNKLLWYIAI----ANVFVYLLRYGILDWSPTYLKEVKHF-ALDKSSWAYFLYEYAGIPG 304 (451)
T ss_dssp ---------CCTHHHHHHTSSCHHHHHHHH----HHHHHHHHHHHHHHHHHHHBTTBSCC-CHHHHHHHHHHHHHHHHHH
T ss_pred ---hhhcccccccchHHHHHcCHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHHHHH
Confidence 000000111111345555433333322 2233333445677788888877 688 8899999999999999999
Q ss_pred HHHHHHHhhhc--CCchhhhchhHHHH-HHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhh
Q 013044 361 TGLAVLVVERL--GRRPLLLGGVSGIV-ISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEM 437 (451)
Q Consensus 361 ~~~~g~l~d~~--g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (451)
.++.+++.||+ +||+.+..+..+.. ++.+++. .....+.+...+..++.+.+.+. ..+....+..|..|++
T Consensus 305 ~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~ 378 (451)
T 1pw4_A 305 TLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYW---MNPAGNPTVDMICMIVIGFLIYG---PVMLIGLHALELAPKK 378 (451)
T ss_dssp HHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHTT---SCCTTCHHHHHHHHHHHHHHHTH---HHHHHHHHHHHTSCTT
T ss_pred HHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHH---HhcccCHHHHHHHHHHHHHHHhc---hHHHHHHHHHHHhchh
Confidence 99999999999 99988777665554 4333221 11122444444444454444443 4555567889999999
Q ss_pred hhhhhhheeeee
Q 013044 438 TRIVCSIYCAKL 449 (451)
Q Consensus 438 ~~~~~~~~~~~~ 449 (451)
.|+++.++.+.+
T Consensus 379 ~~g~~~~~~~~~ 390 (451)
T 1pw4_A 379 AAGTAAGFTGLF 390 (451)
T ss_dssp HHHHHHHHHHHH
T ss_pred hhhhHHHHHHHH
Confidence 999999887654
|
| >3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-34 Score=271.94 Aligned_cols=330 Identities=16% Similarity=0.144 Sum_probs=254.1
Q ss_pred HHHHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHH
Q 013044 53 PFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAAL 132 (451)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~ 132 (451)
.+..+++..+..+++....++.+|.+.++ +|++..+.|++.+++.++..++++++|+++||+|||++++++.+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~ 99 (438)
T 3o7q_A 27 PFALLCSLFFLWAVANNLNDILLPQFQQA-------FTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLF 99 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------SCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchHHHHHHHH
Confidence 33455566677778888889999999888 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH---HHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhc-c
Q 013044 133 LYLVGALVT---ALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLV-D 208 (451)
Q Consensus 133 l~~~~~~~~---~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~-~ 208 (451)
+.+++.+++ ++++|++.++++|++.|++.+...+...+++.|++|+++|++++++.+.+.++|.++++.+++.+. +
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 179 (438)
T 3o7q_A 100 LYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILS 179 (438)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHTTHHHHT
T ss_pred HHHHHHHHHHhccccccHHHHHHHHHHHHhhHHHhhhhHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999 888999999999999999999999999999999999999999999999999999999999999998 5
Q ss_pred cccc------------------------hhHHHhhhHHHHHHHHHHhhc--ccCchHHHHHhhccccCCccchHHHHHHH
Q 013044 209 LVAG------------------------WRYMYGASTPLAVIMGMGMWW--LPASPRWLLLCAMKRKGDMQDLRESAISC 262 (451)
Q Consensus 209 ~~~~------------------------wr~~f~~~~~~~~~~~~~~~~--~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (451)
.... ||+.|++.+++.++..+..++ .||+++. . +.+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~p~~~~~----~---~~~----------- 241 (438)
T 3o7q_A 180 NVPHQSQDVLDKMSPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSD----N---HSD----------- 241 (438)
T ss_dssp SSCCCCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCTTT----C---CCC-----------
T ss_pred ccccccccccccCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCccccc----c---ccc-----------
Confidence 5423 999998888777664444433 3444320 0 000
Q ss_pred HHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHH-HHHc-CC
Q 013044 263 LCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASI-LQSA-GF 340 (451)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~ 340 (451)
+++++.+.+++++++++..+...+...+... .......|.|.+ +++. |+
T Consensus 242 -------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~ 292 (438)
T 3o7q_A 242 -------------------------AKQGSFSASLSRLARIRHWRWAVLAQFCYVG----AQTACWSYLIRYAVEEIPGM 292 (438)
T ss_dssp -------------------------SSTTSHHHHHHHHTTCSHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHSTTC
T ss_pred -------------------------ccccchhhhHHHHHhChHHHHHHHHHHHHHH----HHHHHHHHHHHHhhhccCCc
Confidence 0011122345667776655554444333333 234556677777 7776 88
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhcccc
Q 013044 341 SAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIK 420 (451)
Q Consensus 341 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (451)
+..+++.......++.+++.++.+++.||++||+.+..+.++..++.+++.. .++.+ ..+..++.+.+.+.
T Consensus 293 -~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~g~~~~~-- 363 (438)
T 3o7q_A 293 -TAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAF-----AGGHV-GLIALTLCSAFMSI-- 363 (438)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH-----CCHHH-HHHHHHHHHHHHTT--
T ss_pred -chhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH-----cCCcH-HHHHHHHHHHHHHH--
Confidence 8899999999999999999999999999999999998888777776655443 12333 33344555555554
Q ss_pred CCCceeeeeeecchhhhhhhhhhheee
Q 013044 421 NFNPSKIYHFRIFFFEMTRIVCSIYCA 447 (451)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (451)
..|....+..|..|++ ++.+.++..
T Consensus 364 -~~~~~~~~~~~~~~~~-~~~~~~~~~ 388 (438)
T 3o7q_A 364 -QYPTIFSLGIKNLGQD-TKYGSSFIV 388 (438)
T ss_dssp -HHHHHHHHHHSSCGGG-HHHHHHHHH
T ss_pred -HHHHHHHHHHhhcccc-ccchhhHHH
Confidence 5667777766777766 666666543
|
| >2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-32 Score=256.22 Aligned_cols=328 Identities=13% Similarity=0.089 Sum_probs=248.3
Q ss_pred HHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHH
Q 013044 56 FPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYL 135 (451)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~ 135 (451)
.+++..+..+++.....+.+|.+.++ +|.++.+.+++.+++.++..+++++.|+++||+|||++++.+.++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 76 (375)
T 2gfp_A 4 MLVLLVAVGQMAQTIYIPAIADMARD-------LNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFM 76 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT-------SSSTTHHHHHHHHHHHHHHHHHHTTHHHHHTTSCCCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHH
Confidence 44556667777888888999999888 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhH
Q 013044 136 VGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRY 215 (451)
Q Consensus 136 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~ 215 (451)
++.++.++++|++.++++|++.|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++++.+.. +||+
T Consensus 77 ~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~~~ 155 (375)
T 2gfp_A 77 LATLVAVTTSSLTVLIAASAMQGMGTGVGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMW-NWRA 155 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCCSHHHHHHHHHHHHHHHHHHHHHHSSCHH-HHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHhhhhhHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhc-cHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999887 9999
Q ss_pred HHhhhHHHHHHHHH-HhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccc
Q 013044 216 MYGASTPLAVIMGM-GMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKE 294 (451)
Q Consensus 216 ~f~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (451)
.|++.+++.++..+ ..+++||+++.. + ++++.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-------------------------------------------~~~~~~ 189 (375)
T 2gfp_A 156 CYLFLLVLCAGVTFSMARWMPETRPVD---A-------------------------------------------PRTRLL 189 (375)
T ss_dssp HHHHHHHHHHHHHCCCCCSSCCCSTTT---C-------------------------------------------CCCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHCcccCCCC---c-------------------------------------------ccccHH
Confidence 99999888877554 555677765410 0 001122
Q ss_pred cchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHH-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 013044 295 VSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGR 373 (451)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~ 373 (451)
.+++++++++..+...+...+. .........+.|.++++ .|. +..+.+.......++.+++.++.+++.||.++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~-~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~~~ 264 (375)
T 2gfp_A 190 TSYKTLFGNSGFNCYLLMLIGG----LAGIAAFEACSGVLMGAVLGL-SSMTVSILFILPIPAAFFGAWFAGRPNKRFST 264 (375)
T ss_dssp TCSTHHHHHHHHHHHHHHHHHH----HHHHHHHHHHCSCSSHHHHHH-HHHHHHHHHHTHHHHHHHHHHHHHTTTTHHHH
T ss_pred HHHHHHhcCcchHHHHHHHHHH----HHHHHHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666655444433333222 22334555666666655 677 88889999999999999999999999999887
Q ss_pred chhhhchhHH-HHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheeeee
Q 013044 374 RPLLLGGVSG-IVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCAKL 449 (451)
Q Consensus 374 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (451)
+ ...+... ...+...+.... ...++.+...+..++.+.+.+. ..+....+..|..| +.|+++.++.+..
T Consensus 265 ~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~g~~~~~---~~~~~~~~~~~~~p-~~~g~~~g~~~~~ 334 (375)
T 2gfp_A 265 L--MWQSVICCLLAGLLMWIPDW-FGVMNVWTLLVPAALFFFGAGM---LFPLATSGAMEPFP-FLAGTAGALVGGL 334 (375)
T ss_dssp H--HHHHHHHHHHTSSSSSHHHH-HHHHHHHHHHHHHHHHHHHHHH---TSSTTHHHHHTHHH-HHHHHHHHHHHHH
T ss_pred H--HHHHHHHHHHHHHHHHHHhh-hccccHHHHHHHHHHHHHHHHH---hhHHHHHHHHHhCC-cccchHHHHHHHH
Confidence 2 2222222 111111111110 0012334444555566666665 56777788888888 7899998876543
|
| >4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-29 Score=243.18 Aligned_cols=346 Identities=13% Similarity=0.008 Sum_probs=224.0
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhh-hcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADI-LGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHA 167 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 167 (451)
+|.+..+.+++.+++.++..++++++|+++|| +|||+++.++.++.+++.+++++++|++.++++|+++|++.+...+.
T Consensus 49 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~ 128 (491)
T 4aps_A 49 LHITRATAASIMAIYASMVYLSGTIGGFVADRIIGARPAVFWGGVLIMLGHIVLALPFGASALFGSIILIIIGTGFLKPN 128 (491)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHSCCSTTHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhccch
Confidence 79999999999999999999999999999999 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCC--cchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhhcc-cCchHHHHHh
Q 013044 168 APMYIAETAPTPM--RGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWL-PASPRWLLLC 244 (451)
Q Consensus 168 ~~~~i~~~~~~~~--r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~-~e~~~~~~~~ 244 (451)
..++++|++|+++ |+.++++++.+.++|..++|.+++.+.+.. +||+.|++.++..++..+..++. ++..+
T Consensus 129 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-g~~~~f~~~~~~~~~~~~~~~~~~~~~~~----- 202 (491)
T 4aps_A 129 VSTLVGTLYDEHDRRRDAGFSIFVFGINLGAFIAPLIVGAAQEAA-GYHVAFSLAAIGMFIGLLVYYFGGKKTLD----- 202 (491)
T ss_dssp HHHHHHHHSSSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHHHHHHHHTTCC-----
T ss_pred HHHHHHHHcCcccccceeeehHHHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHHHhCccccc-----
Confidence 9999999999988 777888899999999999999999999887 99999999877766644443332 22110
Q ss_pred hccccCCccchHHHHHHHHHH---------------HhCCCCCCCCchhHHHHHH---h---hcccccccccchhhhhcc
Q 013044 245 AMKRKGDMQDLRESAISCLCR---------------LRGQSIGDSAPTEVDEILT---E---LSYVGEDKEVSLREVFHG 303 (451)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~ 303 (451)
++.++.+.+.+.++.++..+. ......+.+.......... . .....++++....+..+.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (491)
T 4aps_A 203 PHYLRPTDPLAPEEVKPLLVKVSLAVAGFIAIIVVMNLVGWNSLPAYINLLTIVAIAIPVFYFAWMISSVKVTSTEHLRV 282 (491)
T ss_dssp SCCSCCSCCCSHHHHHHHHHHCCCCCHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHHHC------------C
T ss_pred ccccCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHhccCcccccchhhhhHHHHHHHHHHHHHHhhcccccHHHHHHH
Confidence 000111111122222222221 1111111111110000000 0 000000001000111111
Q ss_pred cchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHH-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhh----
Q 013044 304 KCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLL---- 378 (451)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~---- 378 (451)
...........+... .+.....+.+.+.++ .+. +....+.......++.+++.++.+++.||++||+...
T Consensus 283 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~r~~~~~~~~ 357 (491)
T 4aps_A 283 VSYIPLFIAAVLFWA----IEEQGSVVLATFAAERVDS-SWFPVSWFQSLNPLFIMLYTPFFAWLWTAWKKNQPSSPTKF 357 (491)
T ss_dssp TTHHHHHHHHHHHHH----HHGGGGTHHHHHHHHSCCC-SSSCSGGGTTHHHHHHHHHHHHHHHHHHHTTTC---CHHHH
T ss_pred HHHHHHHHHHHHHHH----HHhhccHHHHHHHHHHhcc-CccCHHHHhccchHHHHHHHHHHHHHHHHHhccCCCchHHH
Confidence 111122222222222 223344455666655 454 5567778888889999999999999999999987655
Q ss_pred -chhHHHHHHHHHHHHhhhc----cCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhheeee
Q 013044 379 -GGVSGIVISLFLLGSYYLF----LDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYCAK 448 (451)
Q Consensus 379 -~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (451)
.+..+.+++.+++...... ...+.+...+..++.+.+.+. ..+....+..|..|++.|+++.++.+.
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~---~~~~~~~~~~~~~p~~~~g~~~g~~~~ 429 (491)
T 4aps_A 358 AVGLMFAGLSFLLMAIPGALYGTSGKVSPLWLVGSWALVILGEML---ISPVGLSVTTKLAPKAFNSQMMSMWFL 429 (491)
T ss_dssp HHHHHHHHHHHTTTHHHHHHCCCCTTCCTHHHHHHHHHHHHHHHT---TTTHHHHHHHHHTTTTCSSSSTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHH---HhHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 5555555555544332111 112344455555555555554 567778899999999999999887654
|
| >2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=99.91 E-value=4e-24 Score=208.59 Aligned_cols=142 Identities=18% Similarity=0.200 Sum_probs=131.4
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHhhhhhhh-cchHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHhhhhhhH
Q 013044 91 LSSVEIGLITSGSLYGALIGSILAFNIADIL-GRRRELILAALLYLVGALVTALAP-DFIIMVVGRFVFGIGIGLAMHAA 168 (451)
Q Consensus 91 ~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~l~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~ 168 (451)
.+..+.|++.+++.++..++.++.|+++||+ |||+++.++.++.+++.+++++++ +++.++++|++.|++.+...+..
T Consensus 51 ~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 130 (524)
T 2xut_A 51 LRGAVAKDVFHSFVIGVYFFPLLGGWIADRFFGKYNTILWLSLIYCVGHAFLAIFEHSVQGFYTGLFLIALGSGGIKPLV 130 (524)
T ss_dssp TTTTTHHHHHHHHHHHHHHTHHHHHHHHTTSSCSHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHTTHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhccccchhH
Confidence 9999999999999999999999999999999 999999999999999999999999 99999999999999999999999
Q ss_pred HHHHHhccCCCCcchHHHH---HHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhhc
Q 013044 169 PMYIAETAPTPMRGQLISL---KEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW 233 (451)
Q Consensus 169 ~~~i~~~~~~~~r~~~~~~---~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~ 233 (451)
.+++.|++|+++|+++.+. ...+.++|.+++|.+++.+.+.. +||+.|++.+++.++..+..++
T Consensus 131 ~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-g~~~~f~~~~~~~~~~~~~~~~ 197 (524)
T 2xut_A 131 SSFMGDQFDQSNKSLAQKAFDMFYFTINFGSFFASLSMPLLLKNF-GAAVAFGIPGVLMFVATVFFWL 197 (524)
T ss_dssp HHHHHHTCSTTTTTHHHHHHHHHHHHHHHHHHHHHHTSTHHHHTS-CHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999877666 89999999999999999998876 9999999988887765444433
|
| >2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=6.7e-26 Score=214.28 Aligned_cols=317 Identities=15% Similarity=0.064 Sum_probs=189.8
Q ss_pred cccccc-ccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHH---HHHHHhhhH
Q 013044 72 SCATIS-IESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGA---LVTALAPDF 147 (451)
Q Consensus 72 ~~~~~~-~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~---~~~~~~~~~ 147 (451)
.+.+|. +.++ +|.++.+.|++.+++.++..++++++|+++||+|||++++++..+.+++. ....+.+..
T Consensus 27 ~~~~~~~l~~~-------~g~s~~~~g~~~~~~~~~~~i~~~~~G~lsDr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~ 99 (417)
T 2cfq_A 27 FPFFPIWLHDI-------NHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLL 99 (417)
T ss_dssp TTTHHHHHHTT-------TCCCTTTSHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHHHHHTTSCHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444554 4555 79999999999999999999999999999999999999999888775532 211222221
Q ss_pred -HHHHHHHHHHHHHHhhhhhhHHHHHHhccCC--CCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHH
Q 013044 148 -IIMVVGRFVFGIGIGLAMHAAPMYIAETAPT--PMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLA 224 (451)
Q Consensus 148 -~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~--~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~ 224 (451)
..++..+.+.|++.+...+.....+.++.++ ++|+...+.......+|..++|.+++++.+. +||+.|++.++..
T Consensus 100 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~l~~~l~~~--~~~~~f~~~~~~~ 177 (417)
T 2cfq_A 100 QYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFTI--NNQFVFWLGSGCA 177 (417)
T ss_dssp HTTCCHHHHGGGSSTTHHHHTTHHHHHHHHHHHHHHHTCCHHHHSSSTTTHHHHHHHHHHHHHHH--CSHHHHTTTTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHh--chhHHHHHHHHHH
Confidence 1233445555554444333333334444332 3567777887777889999999999998763 8999999888776
Q ss_pred HHHHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhcccccccccchhhhhccc
Q 013044 225 VIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGK 304 (451)
Q Consensus 225 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (451)
++..+..++.+|+++. +. ++.+. + .. +.++....+++++++++
T Consensus 178 ~~~~~~~~~~~~~~~~---~~--~~~~~--~---------------~~---------------~~~~~~~~~~~~~~~~~ 220 (417)
T 2cfq_A 178 LILAVLLFFAKTDAPS---SA--TVANA--V---------------GA---------------NHSAFSLKLALELFRQP 220 (417)
T ss_dssp TTHHHHSCSSCCCCSC---SS--CSSSS--S---------------SS---------------CCCCCCHHHHHHHTTCH
T ss_pred HHHHHHHHHcCccccc---cc--ccccc--c---------------cc---------------ccccccHHHHHHHhcCC
Confidence 5554444444443210 00 00000 0 00 00001112334566654
Q ss_pred chhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHc-CCC--CchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhhhchh
Q 013044 305 CLKALIIGAGLVLFQQITGQPSVLYYAASILQSA-GFS--AASDATRVSILLGLFKLIMTGLAVLVVERLGRRPLLLGGV 381 (451)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~ 381 (451)
..+...+...... ..+.....+.|.++.+. +.. +....+.......++.+++.++.+++.||+|||+.+..+.
T Consensus 221 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~l~~~~ 296 (417)
T 2cfq_A 221 KLWFLSLYVIGVS----CTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAG 296 (417)
T ss_dssp HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHTSSSHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred chhhHHHHHHHHH----HHHHHHHHHHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcHHHHHHHHH
Confidence 4433332211111 11223333455555442 210 2334567777778888999999999999999999888777
Q ss_pred HHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhhee
Q 013044 382 SGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYC 446 (451)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (451)
.+.+++.+.++. .++.+..++..++...+++. ..+..+.+.+|.+|++.|+++.++.
T Consensus 297 ~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~p~~~~g~~~g~~ 353 (417)
T 2cfq_A 297 TIMSVRIIGSSF-----ATSALEVVILKTLHMFEVPF---LLVGCFKYITSQFEVRFSATIYLVC 353 (417)
T ss_dssp HHHHHHHHHHTT-----CCSHHHHHHHTTHHHHHHHH---HHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----hccHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 766665444321 22333333333333333332 2334467889999999999987763
|
| >1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 | Back alignment and structure |
|---|
Probab=99.55 E-value=9.8e-14 Score=132.27 Aligned_cols=145 Identities=16% Similarity=0.151 Sum_probs=128.7
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhh--cchHHHHHHHHHHH-HHHHHHHHh--hhHHHHHHHHHHHHHHHhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADIL--GRRRELILAALLYL-VGALVTALA--PDFIIMVVGRFVFGIGIGL 163 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~--Grr~~~~~~~~l~~-~~~~~~~~~--~~~~~l~~~r~l~G~~~~~ 163 (451)
+|.+..+.+++.+...++..++.++.|++.||+ |||+.+.++..+.. ++.++..+. .+.+.+.+..++.|++.+.
T Consensus 283 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 362 (451)
T 1pw4_A 283 KHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYG 362 (451)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHTTSCCTTCHHHHHHHHHHHHHHHTH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHhc
Confidence 688999999999999999999999999999999 99999988887776 666666665 3678888889999999999
Q ss_pred hhhhHHHHHHhccCCCCcchHHHHHHHHHHH-HHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhhcc
Q 013044 164 AMHAAPMYIAETAPTPMRGQLISLKEFFIVL-GMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWL 234 (451)
Q Consensus 164 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 234 (451)
..+...+++.|.+|+++|+++.++.+....+ |..++|.+.+.+.+.. +|+..|++.+++.++..+..+++
T Consensus 363 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~g~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~ 433 (451)
T 1pw4_A 363 PVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF-GWDGGFMVMIGGSILAVILLIVV 433 (451)
T ss_dssp HHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS-CSHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 9999999999999987 89999999888887755555444
|
| >2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=2.3e-13 Score=128.26 Aligned_cols=146 Identities=14% Similarity=0.136 Sum_probs=124.6
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhHHHH
Q 013044 92 SSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMY 171 (451)
Q Consensus 92 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 171 (451)
+....++..++..++..++.++.|+++||+|||+++..+.++.+++.++.++.++.+.+++..++.+++.+...+....+
T Consensus 257 ~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 336 (417)
T 2cfq_A 257 GTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKY 336 (417)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667888888889999999999999999999999999998888888888888888888888888898888777888899
Q ss_pred HHhccCCCCcchHHHH-HHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHH-hhcccCch
Q 013044 172 IAETAPTPMRGQLISL-KEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMG-MWWLPASP 238 (451)
Q Consensus 172 i~~~~~~~~r~~~~~~-~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~e~~ 238 (451)
+.|.+|++.|+++.++ .+....+|.+++|.+++.+.+.. +++..|.+.+++.++..+. +++.||.+
T Consensus 337 ~~~~~p~~~~g~~~g~~~~~~~~lg~~~gp~l~G~l~~~~-g~~~~f~~~~~~~l~~~~~~~~~~~~~~ 404 (417)
T 2cfq_A 337 ITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESI-GFQGAYLVLGLVALGFTLISVFTLSGPG 404 (417)
T ss_dssp HHHHSCHHHHHHHHHHHHTTTHHHHHHHHTHHHHTHHHHS-HHHHHHHHHHHHHHHHHHHHTTSSCCSC
T ss_pred HHHHCCHHHHHHHHHHHHHHHHhHHHHHhhhhHHHHHHhc-CcHHHHHHHHHHHHHHHHHHHhhhcCCC
Confidence 9999999999999998 48888899999999999998876 8999999888887774444 44456543
|
| >3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=7.2e-13 Score=125.78 Aligned_cols=141 Identities=9% Similarity=-0.017 Sum_probs=121.5
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 168 (451)
+|.+..+.++..+.+.++..++.++.|+++||+|||+++.++.++..++.++..+.++.+.++.. ++.|++.+...+..
T Consensus 290 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~ 368 (438)
T 3o7q_A 290 PGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVGLIAL-TLCSAFMSIQYPTI 368 (438)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH-HHHHHHHTTHHHHH
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHcCCcHHHHHH-HHHHHHHHHHHHHH
Confidence 58899999999999999999999999999999999999999999999999999988887765554 88999999999999
Q ss_pred HHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccc-hhHHHhhhHHHHHHHHHHhhc
Q 013044 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAG-WRYMYGASTPLAVIMGMGMWW 233 (451)
Q Consensus 169 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~-wr~~f~~~~~~~~~~~~~~~~ 233 (451)
.++..|.+|++ |+.+.++.. ...+|..++|.+.+.+.+.. | ++..|++.++..++..+..+.
T Consensus 369 ~~~~~~~~~~~-~~~~~~~~~-~~~~g~~~~~~~~g~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~ 431 (438)
T 3o7q_A 369 FSLGIKNLGQD-TKYGSSFIV-MTIIGGGIVTPVMGFVSDAA-GNIPTAELIPALCFAVIFIFARF 431 (438)
T ss_dssp HHHHHSSCGGG-HHHHHHHHH-HTTHHHHHHHHHHHHHHHHH-TSSGGGGHHHHHHHHHHHHHHTT
T ss_pred HHHHHhhcccc-ccchhhHHH-HHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999865 888888777 55699999999999999987 6 999998876665554443333
|
| >4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} | Back alignment and structure |
|---|
Probab=99.35 E-value=3.3e-12 Score=123.16 Aligned_cols=142 Identities=11% Similarity=0.022 Sum_probs=116.9
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHH-----HHHHHHHHHHHHHHHhh---------hHHHHHHHHH
Q 013044 90 DLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELI-----LAALLYLVGALVTALAP---------DFIIMVVGRF 155 (451)
Q Consensus 90 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~-----~~~~l~~~~~~~~~~~~---------~~~~l~~~r~ 155 (451)
+.+..+.+++.+...++..++.++.|++.||+|||+... .+.++.+++.++..+.. +.+.++++-+
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (491)
T 4aps_A 315 DSSWFPVSWFQSLNPLFIMLYTPFFAWLWTAWKKNQPSSPTKFAVGLMFAGLSFLLMAIPGALYGTSGKVSPLWLVGSWA 394 (491)
T ss_dssp CCSSSCSGGGTTHHHHHHHHHHHHHHHHHHHTTTC---CHHHHHHHHHHHHHHHTTTHHHHHHCCCCTTCCTHHHHHHHH
T ss_pred ccCccCHHHHhccchHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHH
Confidence 444466788888889999999999999999999986655 77777777777776643 7788888899
Q ss_pred HHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhhc
Q 013044 156 VFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW 233 (451)
Q Consensus 156 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~ 233 (451)
+.|++.+...+...+++.|.+|+++|+++.++......+|..+++.+.+.+.+. ++.+.|.+.++++++..+..++
T Consensus 395 l~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 470 (491)
T 4aps_A 395 LVILGEMLISPVGLSVTTKLAPKAFNSQMMSMWFLSSSVGSALNAQLVTLYNAK--SEVAYFSYFGLGSVVLGIVLVF 470 (491)
T ss_dssp HHHHHHHTTTTHHHHHHHHHTTTTCSSSSTHHHHHHHHHHHHHHHHHGGGGGGS--STTHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999988764 6777888888777774444433
|
| >4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=2.7e-12 Score=123.77 Aligned_cols=150 Identities=15% Similarity=0.010 Sum_probs=110.4
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhh----hHHHHHHHHHH-HHHHHhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP----DFIIMVVGRFV-FGIGIGL 163 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~----~~~~l~~~r~l-~G~~~~~ 163 (451)
.+.+............+...++.++.+.+.||+|||+.++.+.....++.+..+... +.+..++.-++ .+.....
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dr~Grr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (491)
T 4gc0_A 307 LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMS 386 (491)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred cCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhcCcchhccchHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhH
Confidence 456667777777888889999999999999999999999999888888777665431 11222222222 2222233
Q ss_pred hhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccc-----cchhHHHhhhHHHHHH-HHHHhhcccCc
Q 013044 164 AMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV-----AGWRYMYGASTPLAVI-MGMGMWWLPAS 237 (451)
Q Consensus 164 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~-----~~wr~~f~~~~~~~~~-~~~~~~~~~e~ 237 (451)
..+....+.+|.+|.+.|++++++......+|.++++.+...+.+.. .++.+.|++.++++++ .++.++++||+
T Consensus 387 ~~~~~~~~~~E~fPt~~R~~~~g~~~~~~~~~~~i~~~~~p~l~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~PET 466 (491)
T 4gc0_A 387 WGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPET 466 (491)
T ss_dssp TTHHHHHHHHHSSCTTTHHHHHHHHHHHHHHHHHHHHTHHHHHCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHheecCC
Confidence 45677889999999999999999999999999998888776654321 1566778888888777 55566789998
Q ss_pred h
Q 013044 238 P 238 (451)
Q Consensus 238 ~ 238 (451)
.
T Consensus 467 k 467 (491)
T 4gc0_A 467 K 467 (491)
T ss_dssp T
T ss_pred C
Confidence 5
|
| >2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.98 E-value=1.4e-10 Score=107.44 Aligned_cols=129 Identities=16% Similarity=0.088 Sum_probs=104.7
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHH-HHHHHH--HHHH--hhhHHHHHHHHHHHHHHHhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALL-YLVGAL--VTAL--APDFIIMVVGRFVFGIGIGL 163 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l-~~~~~~--~~~~--~~~~~~l~~~r~l~G~~~~~ 163 (451)
+|.++.+.+++.+...++..++.++.+++.||+|++.. .+..+ ...+.. .... .++.+.+++..++.|++.+.
T Consensus 230 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 307 (375)
T 2gfp_A 230 LGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMW--QSVICCLLAGLLMWIPDWFGVMNVWTLLVPAALFFFGAGM 307 (375)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHHTTTTHHHHHHH--HHHHHHHHTSSSSSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHH
Confidence 68888999999999999999999999999999998332 23222 222222 2222 24778888889999999999
Q ss_pred hhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHHHhhhH
Q 013044 164 AMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGAST 221 (451)
Q Consensus 164 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~ 221 (451)
..+...+++.|..| ++|+++.++.+....+|..+++.+.+.+.+.. +|+..+++.+
T Consensus 308 ~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~-~~~~~~~~~~ 363 (375)
T 2gfp_A 308 LFPLATSGAMEPFP-FLAGTAGALVGGLQNIGSGVLASLSAMLPQTG-QGSLGLLMTL 363 (375)
T ss_dssp TSSTTHHHHHTHHH-HHHHHHHHHHHHHHHHHHHCCSTTCTHHHHHH-HHHHHHHHHH
T ss_pred hhHHHHHHHHHhCC-cccchHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccHHHHHHH
Confidence 99999999999998 89999999999999999999999999987765 7877776643
|
| >2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=98.79 E-value=8.4e-09 Score=100.12 Aligned_cols=138 Identities=9% Similarity=0.051 Sum_probs=103.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhh----hhhcc----hHHHHHHHHHHHHHHHHHHHh---------hhHHHHHHHHHHH
Q 013044 95 EIGLITSGSLYGALIGSILAFNIA----DILGR----RRELILAALLYLVGALVTALA---------PDFIIMVVGRFVF 157 (451)
Q Consensus 95 ~~g~~~s~~~~~~~~~~~~~g~l~----dr~Gr----r~~~~~~~~l~~~~~~~~~~~---------~~~~~l~~~r~l~ 157 (451)
..+++.+...++..++.++.+++. ||.|+ ++.+.++.++.+++.++.++. .+.+.+++..++.
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 415 (524)
T 2xut_A 336 EPAMMQALNPLLVMLLIPFNNFVLYPAIERMGVKLTALRKMGAGIAITGLSWIVVGTIQLMMDGGSALSIFWQILPYALL 415 (524)
T ss_dssp CHHHHHTTSGGGHHHHGGGTTTC------------CCHHHHHTHHHHHHHHHHTTTTTTTTTTTTCCCCSHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhHHHHHhhhHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHH
Confidence 456677777777777777777764 55543 356777888888887777664 3677888889999
Q ss_pred HHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccc-cch---------hHHHhhhHHHHHHH
Q 013044 158 GIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV-AGW---------RYMYGASTPLAVIM 227 (451)
Q Consensus 158 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~-~~w---------r~~f~~~~~~~~~~ 227 (451)
|++.+...+...+++.|..|+++|++++|+.+....+|..+++.+.+.+.+.. .+| +..|++.+++.++.
T Consensus 416 g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (524)
T 2xut_A 416 TFGEVLVSATGLEFAYSQAPKAMKGTIMSFWTLSVTVGNLWVLLANVSVKSPTVTEQIVQTGMSVTAFQMFFFAGFAILA 495 (524)
T ss_dssp HHHHHHHHHHHTTTHHHHCCTTCCTTTHHHHGGGHHHHHHHHHHHHHHTTSCHHHHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCcHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987632 124 34466666666664
Q ss_pred HHHhh
Q 013044 228 GMGMW 232 (451)
Q Consensus 228 ~~~~~ 232 (451)
.+..+
T Consensus 496 ~~~~~ 500 (524)
T 2xut_A 496 AIVFA 500 (524)
T ss_dssp HHHHC
T ss_pred HHHHH
Confidence 44433
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 451 | ||||
| d1pw4a_ | 447 | f.38.1.1 (A:) Glycerol-3-phosphate transporter {Es | 9e-10 | |
| d1pv7a_ | 417 | f.38.1.2 (A:) Lactose permease {Escherichia coli [ | 4e-06 | |
| d1pv7a_ | 417 | f.38.1.2 (A:) Lactose permease {Escherichia coli [ | 0.002 |
| >d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Length = 447 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: MFS general substrate transporter superfamily: MFS general substrate transporter family: Glycerol-3-phosphate transporter domain: Glycerol-3-phosphate transporter species: Escherichia coli [TaxId: 562]
Score = 58.2 bits (139), Expect = 9e-10
Identities = 41/338 (12%), Positives = 99/338 (29%), Gaps = 34/338 (10%)
Query: 80 SPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGAL 139
+ + + S ++G SG + +++D R L +L L
Sbjct: 45 ALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVML 104
Query: 140 VTALAPD----FIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLG 195
P +M V F+ G G+ + RG ++S+ +G
Sbjct: 105 FMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVG 164
Query: 196 MVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDL 255
+ L + W A+++ + + +
Sbjct: 165 GGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQ--------------- 209
Query: 256 RESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLK-ALIIGAG 314
S G E + ++E++ +++F L L+
Sbjct: 210 --------------SCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIA 255
Query: 315 LVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRR 374
+ + +L ++ + L+ A ++ L + T L + +++ R
Sbjct: 256 IANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRG 315
Query: 375 PLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLY 412
GV + + Y++ P V ++ +++
Sbjct: 316 NRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVI 353
|
| >d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Length = 417 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: MFS general substrate transporter superfamily: MFS general substrate transporter family: LacY-like proton/sugar symporter domain: Lactose permease species: Escherichia coli [TaxId: 562]
Score = 46.7 bits (109), Expect = 4e-06
Identities = 25/182 (13%), Positives = 56/182 (30%), Gaps = 5/182 (2%)
Query: 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFI 148
+S + G+I + +L+ L ++D LG R+ L+ LV +
Sbjct: 38 NHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGP 97
Query: 149 IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYG--IGSLL 206
++ V I G+ + A + F M G G +G+ +
Sbjct: 98 LLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASI 157
Query: 207 VDLVA---GWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCL 263
V ++ + S ++ + + +P + + A+
Sbjct: 158 VGIMFTINNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGANHSAFSLKLALELF 217
Query: 264 CR 265
+
Sbjct: 218 RQ 219
|
| >d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Length = 417 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: MFS general substrate transporter superfamily: MFS general substrate transporter family: LacY-like proton/sugar symporter domain: Lactose permease species: Escherichia coli [TaxId: 562]
Score = 37.8 bits (86), Expect = 0.002
Identities = 17/116 (14%), Positives = 42/116 (36%), Gaps = 2/116 (1%)
Query: 129 LAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLK 188
LA + V + ++ A + +V+ + + + + YI + +
Sbjct: 294 LAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVC 353
Query: 189 -EFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLL 243
FF L M+ + + + + G++ Y +A+ + + + P L L
Sbjct: 354 FCFFKQLAMIFMSVLAGNMYESI-GFQGAYLVLGLVALGFTLISVFTLSGPGPLSL 408
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 451 | |||
| d1pw4a_ | 447 | Glycerol-3-phosphate transporter {Escherichia coli | 100.0 | |
| d1pv7a_ | 417 | Lactose permease {Escherichia coli [TaxId: 562]} | 99.9 | |
| d1pv7a_ | 417 | Lactose permease {Escherichia coli [TaxId: 562]} | 99.58 | |
| d1pw4a_ | 447 | Glycerol-3-phosphate transporter {Escherichia coli | 99.43 |
| >d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: MFS general substrate transporter superfamily: MFS general substrate transporter family: Glycerol-3-phosphate transporter domain: Glycerol-3-phosphate transporter species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.8e-35 Score=280.62 Aligned_cols=360 Identities=13% Similarity=0.009 Sum_probs=255.7
Q ss_pred hHHHHHHHHHHHhhhhhcccccccccccccccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHH
Q 013044 48 SAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRREL 127 (451)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~ 127 (451)
+..|.++..++++++...++...++.+.|.+.+ +|+|.+++|++.+++.+++.++++++|+++||+|||+++
T Consensus 21 ~~~w~i~~~~~~~~~~~~~~~~~~~~~~p~~~~--------~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~~ 92 (447)
T d1pw4a_ 21 RLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVE--------QGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFL 92 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSHHHHHHHTTS--------STTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH
Confidence 445667777788888888888888888898764 699999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHh----hhHHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHh
Q 013044 128 ILAALLYLVGALVTALA----PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIG 203 (451)
Q Consensus 128 ~~~~~l~~~~~~~~~~~----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~ 203 (451)
.++.++.+++.++++++ ++++.++++|++.|++.|...+...+++.|++|+++|++++++.+.+..+|..+++.++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 172 (447)
T d1pw4a_ 93 PAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLF 172 (447)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHSSSSHHHHHHHHHHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHH
T ss_pred HHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhhcccccccccccccchhhhhhhhhh
Confidence 99999999999999876 47889999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccccchhHHHhhhHHHHHH-HHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHH
Q 013044 204 SLLVDLVAGWRYMYGASTPLAVI-MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEI 282 (451)
Q Consensus 204 ~~l~~~~~~wr~~f~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (451)
+.+.....+||+.|++.+++.++ .++.+++.+|+|+...... ..+.+.+ ..++.
T Consensus 173 ~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~----------------------~~~~~ 227 (447)
T d1pw4a_ 173 LLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPP---IEEYKND----------------------YPDDY 227 (447)
T ss_dssp HHHHHHTCCSTTCTHHHHHHHHHHHHHHHHHCCCSSTTTCCCS---CTTTCCC---------------------------
T ss_pred hhHhhhhhcccccchhhhhhHHHHHHHHHHhcccchhhcccch---hhhhhhh----------------------cccch
Confidence 88777555899999999888877 4445555666654211000 0000000 00000
Q ss_pred HHhhcccccccccchhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHH-cCCCCchhHHHHHHHHHHHHHHHH
Q 013044 283 LTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKLIMT 361 (451)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~ 361 (451)
.+..+.+...++...+..++++..+ ......+...........+.+.++++ .++ +..+.+.......++.+++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 302 (447)
T d1pw4a_ 228 NEKAEQELTAKQIFMQYVLPNKLLW----YIAIANVFVYLLRYGILDWSPTYLKEVKHF-ALDKSSWAYFLYEYAGIPGT 302 (447)
T ss_dssp --------CCTHHHHHHTSSCHHHH----HHHHHHHHHHHHHHHHHHHHHHHBTTBSCC-CHHHHHHHHHHHHHHHHHHH
T ss_pred hhccccccchhhHHHHHHHcCchHH----HHHHHhhhhhhhhhcchhhhhhhccccccc-ccchhhhhhhcchhhhhhhh
Confidence 0000001111222333444443222 22222223333344566677777665 466 88999999999999999999
Q ss_pred HHHHHHhhhcCCchhhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhh
Q 013044 362 GLAVLVVERLGRRPLLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIV 441 (451)
Q Consensus 362 ~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (451)
++.+++.||++|++..........+..............+.+...+..++.+.+.+. ..+....+..|.+|++.|++
T Consensus 303 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~p~~~~g~ 379 (447)
T d1pw4a_ 303 LLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYG---PVMLIGLHALELAPKKAAGT 379 (447)
T ss_dssp HHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHTTSCCTTCHHHHHHHHHHHHHHHTH---HHHHHHHHHHHTSCTTHHHH
T ss_pred hhhhhhhhhccccccccccchhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHcCHHHHHH
Confidence 999999999998765544444433333333333222233444444444444444433 45666788899999999999
Q ss_pred hhheeee
Q 013044 442 CSIYCAK 448 (451)
Q Consensus 442 ~~~~~~~ 448 (451)
+.++.+.
T Consensus 380 ~~g~~~~ 386 (447)
T d1pw4a_ 380 AAGFTGL 386 (447)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9987654
|
| >d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: MFS general substrate transporter superfamily: MFS general substrate transporter family: LacY-like proton/sugar symporter domain: Lactose permease species: Escherichia coli [TaxId: 562]
Probab=99.90 E-value=5.7e-25 Score=204.97 Aligned_cols=327 Identities=14% Similarity=0.040 Sum_probs=209.2
Q ss_pred hccccccccccccc-ccCCCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHH
Q 013044 64 YGYDIGSTSCATIS-IESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTA 142 (451)
Q Consensus 64 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~ 142 (451)
..+..+...+.+|. +.++ +|+|++++|++.+++.++..++++++|+++||+|||++++++..+..++.++..
T Consensus 19 ~~~~~~~~~~~l~~~l~~~-------~g~s~~~~g~i~s~~~l~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~ 91 (417)
T d1pv7a_ 19 YFFIMGAYFPFFPIWLHDI-------NHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFF 91 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHH-------HCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCTHHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHc-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 33344455666665 4555 799999999999999999999999999999999999999999999999999888
Q ss_pred HhhhHHHH----HHHHHHHHHHHhhhhhhHHHHHHhccCC--CCcchHHHHHHHHHHHHHHHHHHHhhhhcccccchhHH
Q 013044 143 LAPDFIIM----VVGRFVFGIGIGLAMHAAPMYIAETAPT--PMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYM 216 (451)
Q Consensus 143 ~~~~~~~l----~~~r~l~G~~~~~~~~~~~~~i~~~~~~--~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~ 216 (451)
+..+.... ++.+.+.+.+.+...........+..++ +++.+..+........+..+++.+++.+.+. +|+..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~ 169 (417)
T d1pv7a_ 92 IFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFTI--NNQFV 169 (417)
T ss_dssp HHTHHHHHHTTCHHHHHHTTTTGGGGGTTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHH--CHHHH
T ss_pred HhhhhhhHHHHHHHHHHHhhhcccccccchhhcccccccchhhhhHHHHHHHhhhhccccccccccccccccc--ccccc
Confidence 87765544 3444444444444444444444333332 3456677788888899999999999998775 56666
Q ss_pred HhhhHHHHHH-HHHHhhcccCchHHHHHhhccccCCccchHHHHHHHHHHHhCCCCCCCCchhHHHHHHhhccccccccc
Q 013044 217 YGASTPLAVI-MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEV 295 (451)
Q Consensus 217 f~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (451)
+........+ ..+..+..+|+++....++ ++ .+..+.....
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~---------------------------~~~~~~~~~~ 211 (417)
T d1pv7a_ 170 FWLGSGCALILAVLLFFAKTDAPSSATVAN-----------AV---------------------------GANHSAFSLK 211 (417)
T ss_dssp HHHHHHHHHHHHHHHHSSCCCSCSSSCSSH-----------HH---------------------------HSCCCCCCHH
T ss_pred ccchhhHHHHHHHHHHHHhcccccchhhhh-----------hh---------------------------hhhccccccc
Confidence 6555555444 5566666666654110000 00 0000111111
Q ss_pred chhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCch
Q 013044 296 SLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKLIMTGLAVLVVERLGRRP 375 (451)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~ 375 (451)
...+..+.+..+......................+.....+..+. +....+.......++..++..+.+++.||.++|+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~ 290 (417)
T d1pv7a_ 212 LALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQ-GTRVFGYVTTMGELLNASIMFFAPLIINRIGGKN 290 (417)
T ss_dssp HHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSCHHH-HHHHHHHHHHHHHHHHHHHHTTHHHHHHHHCHHH
T ss_pred ccccccccccccchhhhhHHHHHHHHhhhcccccccccccccccc-chhhhcccccccccccccchhhhhhhhccccccc
Confidence 222333333333333322222222111111111111111111222 3455667778888899999999999999999999
Q ss_pred hhhchhHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhhccccCCCceeeeeeecchhhhhhhhhhhee
Q 013044 376 LLLGGVSGIVISLFLLGSYYLFLDDVPAVAVVALLLYVGCYQVIKNFNPSKIYHFRIFFFEMTRIVCSIYC 446 (451)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (451)
.+..+..+..++.+.+.. .++.+..++..++.+.+.+. ..+....+..|..|++.|+++.++.
T Consensus 291 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (417)
T d1pv7a_ 291 ALLLAGTIMSVRIIGSSF-----ATSALEVVILKTLHMFEVPF---LLVGCFKYITSQFEVRFSATIYLVC 353 (417)
T ss_dssp HHHHHHHHHHHHHHHHHT-----CCCHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHSCGGGHHHHHHHH
T ss_pred chhhhHHHHHHhhhcccc-----ccccchhhHHHHHHHHHHHH---HHHHHHHHHHHHCCHhHHHHHHHHH
Confidence 998888887777666543 35566666666666677665 5677788889999999999988764
|
| >d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: MFS general substrate transporter superfamily: MFS general substrate transporter family: LacY-like proton/sugar symporter domain: Lactose permease species: Escherichia coli [TaxId: 562]
Probab=99.58 E-value=1.5e-15 Score=140.39 Aligned_cols=147 Identities=14% Similarity=0.135 Sum_probs=132.2
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhH
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 168 (451)
.+.+....+...+...++..++..+.+++.||+|+|+.+.++.++.+++.++..+.++.+.+++..++.|++.+...+..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 333 (417)
T d1pv7a_ 254 GEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGC 333 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhcccccccccccccchhhhhhhhcccccccchhhhHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHHH
Confidence 45677788889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCcchHHHHH-HHHHHHHHHHHHHHhhhhcccccchhHHHhhhHHHHHHH-HHHhhcccC
Q 013044 169 PMYIAETAPTPMRGQLISLK-EFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIM-GMGMWWLPA 236 (451)
Q Consensus 169 ~~~i~~~~~~~~r~~~~~~~-~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~-~~~~~~~~e 236 (451)
.+++.|.+|+++|++..++. +....+|..++|.++|++.+.. ||++.|++.+++.++. ++..+.+++
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~G~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~l~~ 402 (417)
T d1pv7a_ 334 FKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESI-GFQGAYLVLGLVALGFTLISVFTLSG 402 (417)
T ss_dssp HHHHHHHSCGGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 99999999999999999985 5677899999999999999988 9999999988887774 444444543
|
| >d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: MFS general substrate transporter superfamily: MFS general substrate transporter family: Glycerol-3-phosphate transporter domain: Glycerol-3-phosphate transporter species: Escherichia coli [TaxId: 562]
Probab=99.43 E-value=8.4e-13 Score=123.22 Aligned_cols=144 Identities=16% Similarity=0.129 Sum_probs=115.2
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHH---H--hhhHHHHHHHHHHHHHHHhh
Q 013044 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTA---L--APDFIIMVVGRFVFGIGIGL 163 (451)
Q Consensus 89 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~---~--~~~~~~l~~~r~l~G~~~~~ 163 (451)
++.+..+.++..+...++..++.++.|+++||++||+..........+..+... . .++.+..+++-++.|++.+.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 359 (447)
T d1pw4a_ 280 KHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYG 359 (447)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHTTSCCTTCHHHHHHHHHHHHHHHTH
T ss_pred cccccchhhhhhhcchhhhhhhhhhhhhhhhhccccccccccchhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHH
Confidence 688999999999999999999999999999999987654443333332222222 1 35678888888999999998
Q ss_pred hhhhHHHHHHhccCCCCcchHHHHHHHHHHH-HHHHHHHHhhhhcccccchhHHHhhhHHHHHHHHHHhhc
Q 013044 164 AMHAAPMYIAETAPTPMRGQLISLKEFFIVL-GMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW 233 (451)
Q Consensus 164 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~ 233 (451)
..+....+..|.+|+++|+++.|+.+....+ |.+++|.+.+.+.+.. ||+..|++.++..++..++..+
T Consensus 360 ~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~g~~~~~~~~g~~~~~~-g~~~~~~~~~~~~~~~~~~~~~ 429 (447)
T d1pw4a_ 360 PVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF-GWDGGFMVMIGGSILAVILLIV 429 (447)
T ss_dssp HHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS-CSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998877666 6678899999999987 9999999888777764444333
|