Citrus Sinensis ID: 013069
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 450 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SU58 | 960 | ATPase 4, plasma membrane | yes | no | 0.735 | 0.344 | 0.842 | 1e-165 | |
| P23980 | 704 | Plasma membrane ATPase 2 | N/A | no | 0.684 | 0.437 | 0.833 | 1e-164 | |
| Q9LV11 | 956 | ATPase 11, plasma membran | no | no | 0.735 | 0.346 | 0.833 | 1e-164 | |
| Q08435 | 957 | Plasma membrane ATPase 1 | N/A | no | 0.688 | 0.323 | 0.836 | 1e-163 | |
| Q08436 | 956 | Plasma membrane ATPase 3 | N/A | no | 0.735 | 0.346 | 0.839 | 1e-163 | |
| P22180 | 956 | Plasma membrane ATPase 1 | N/A | no | 0.735 | 0.346 | 0.827 | 1e-162 | |
| Q7XPY2 | 951 | Plasma membrane ATPase OS | no | no | 0.782 | 0.370 | 0.717 | 1e-151 | |
| Q9SJB3 | 949 | ATPase 5, plasma membrane | no | no | 0.733 | 0.347 | 0.770 | 1e-150 | |
| P83970 | 951 | Plasma membrane ATPase OS | N/A | no | 0.677 | 0.320 | 0.767 | 1e-149 | |
| P20431 | 949 | ATPase 3, plasma membrane | no | no | 0.686 | 0.325 | 0.743 | 1e-147 |
| >sp|Q9SU58|PMA4_ARATH ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=AHA4 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 580 bits (1496), Expect = e-165, Method: Compositional matrix adjust.
Identities = 279/331 (84%), Positives = 307/331 (92%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIV 60
MAGMDVLC DKTGTLTLNKLTVDKNLIE+F GVDADTVVLMAARAS++EN D IDAAIV
Sbjct: 328 MAGMDVLCSDKTGTLTLNKLTVDKNLIEVFMKGVDADTVVLMAARASRLENQDAIDAAIV 387
Query: 61 GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKI 120
GMLADPK+ARA IQEVHFLPF+PT KRTALTYID+EG HRV+KG+PEQILNL HNKS+I
Sbjct: 388 GMLADPKDARAGIQEVHFLPFNPTDKRTALTYIDNEGNTHRVSKGAPEQILNLAHNKSEI 447
Query: 121 GRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRR 180
R+V+AVI+KFAERGLRSLAVAYQ+VPEG K+S+G PWQF+GL+PLFDPP HDSAETIRR
Sbjct: 448 ERRVHAVIDKFAERGLRSLAVAYQDVPEGRKDSAGGPWQFVGLMPLFDPPRHDSAETIRR 507
Query: 181 ALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240
AL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ++DESIVALPVDELIEKAD
Sbjct: 508 ALNLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKAD 567
Query: 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 300
GFAGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAARSA+DIV
Sbjct: 568 GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 627
Query: 301 LTEPGLNVIITAVLISRAIFQRMRNYMVRGI 331
LTEPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 628 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 658
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 6 |
| >sp|P23980|PMA2_SOLLC Plasma membrane ATPase 2 (Fragment) OS=Solanum lycopersicum GN=LHA2 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 577 bits (1488), Expect = e-164, Method: Compositional matrix adjust.
Identities = 276/331 (83%), Positives = 301/331 (90%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIV 60
MAGMDVLC DKTGTLTLNKLTVDKNL+E+FA GVDADTVVLMAARAS+ EN D ID AIV
Sbjct: 72 MAGMDVLCSDKTGTLTLNKLTVDKNLVEVFAKGVDADTVVLMAARASRTENQDAIDTAIV 131
Query: 61 GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKI 120
GMLADPKEARA I+E+HFLPF+PT KRTALTY+D EGKMHRV+KG+PEQILNL HNKS I
Sbjct: 132 GMLADPKEARAGIREIHFLPFNPTDKRTALTYLDGEGKMHRVSKGAPEQILNLAHNKSDI 191
Query: 121 GRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRR 180
R+V+ VI+KFAERGLRSL VAYQEVPEG KESSG PWQFIGL+PLFDPP HDSAETIRR
Sbjct: 192 ERRVHTVIDKFAERGLRSLGVAYQEVPEGRKESSGGPWQFIGLLPLFDPPRHDSAETIRR 251
Query: 181 ALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240
AL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ +DESI +LP+DELIEKAD
Sbjct: 252 ALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQTKDESIASLPIDELIEKAD 311
Query: 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 300
GFAGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAV DATDAARSA+DIV
Sbjct: 312 GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVDDATDAARSASDIV 371
Query: 301 LTEPGLNVIITAVLISRAIFQRMRNYMVRGI 331
LTEPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 372 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 402
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Solanum lycopersicum (taxid: 4081) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9LV11|PMA11_ARATH ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=AHA11 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 577 bits (1486), Expect = e-164, Method: Compositional matrix adjust.
Identities = 276/331 (83%), Positives = 308/331 (93%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIV 60
MAGMDVLC DKTGTLTLNKLTVDKNLIE+F GVDADTVVLMAA+AS++EN D IDAAIV
Sbjct: 324 MAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRLENQDAIDAAIV 383
Query: 61 GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKI 120
GMLADPKEARA ++EVHFLPF+PT KRTALTYIDS+GKMHRV+KG+PEQILNL HN+++I
Sbjct: 384 GMLADPKEARAGVREVHFLPFNPTDKRTALTYIDSDGKMHRVSKGAPEQILNLAHNRAEI 443
Query: 121 GRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRR 180
R+V+AVI+KFAERGLRSLAVAYQEVPEG+KES+G PWQF+GL+PLFDPP HDSAETIRR
Sbjct: 444 ERRVHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGPWQFMGLMPLFDPPRHDSAETIRR 503
Query: 181 ALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240
AL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ +DESI ALP+D+LIEKAD
Sbjct: 504 ALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQHKDESIGALPIDDLIEKAD 563
Query: 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 300
GFAGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAARSA+DIV
Sbjct: 564 GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
Query: 301 LTEPGLNVIITAVLISRAIFQRMRNYMVRGI 331
LTEPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 624 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 654
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q08435|PMA1_NICPL Plasma membrane ATPase 1 OS=Nicotiana plumbaginifolia GN=PMA1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 576 bits (1484), Expect = e-163, Method: Compositional matrix adjust.
Identities = 277/331 (83%), Positives = 302/331 (91%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIV 60
MAGMDVLC DKTGTLTLNKLTVDKNLIE+FA GVDAD VVLMAARAS+ EN D IDAAIV
Sbjct: 325 MAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDADMVVLMAARASRTENQDAIDAAIV 384
Query: 61 GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKI 120
GMLADPKEARA I+E+HFLPF+PT KRTALTY+D EGKMHRV+KG+PEQILNL HNKS I
Sbjct: 385 GMLADPKEARAGIREIHFLPFNPTDKRTALTYLDGEGKMHRVSKGAPEQILNLAHNKSDI 444
Query: 121 GRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRR 180
R+V+AVI+KFAERGLRSL VAYQEVPEG KES+G PWQFIGL+PLFDPP HDSAETIRR
Sbjct: 445 ERRVHAVIDKFAERGLRSLGVAYQEVPEGRKESAGGPWQFIGLLPLFDPPRHDSAETIRR 504
Query: 181 ALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240
AL+LG+ VKM+TGDQLAI KETGRRLGMGTNMYPSSAL GQ +DESI ALP+DELIEKAD
Sbjct: 505 ALNLGVNVKMVTGDQLAIGKETGRRLGMGTNMYPSSALLGQTKDESISALPIDELIEKAD 564
Query: 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 300
GFAGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAV DATDAARSA+DIV
Sbjct: 565 GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVDDATDAARSASDIV 624
Query: 301 LTEPGLNVIITAVLISRAIFQRMRNYMVRGI 331
LTEPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 625 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 655
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Nicotiana plumbaginifolia (taxid: 4092) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q08436|PMA3_NICPL Plasma membrane ATPase 3 OS=Nicotiana plumbaginifolia GN=PMA3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 573 bits (1477), Expect = e-163, Method: Compositional matrix adjust.
Identities = 278/331 (83%), Positives = 302/331 (91%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIV 60
MAGMDVLC DKTGTLTLNKLTVDK LIE+FA GVDADTVVLMAARAS+ EN D IDAAIV
Sbjct: 324 MAGMDVLCSDKTGTLTLNKLTVDKYLIEVFARGVDADTVVLMAARASRTENQDAIDAAIV 383
Query: 61 GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKI 120
GMLADPKEARA I+E+HFLPF+PT KRTALTY+D EGKMHRV+KG+PEQIL+L HNKS I
Sbjct: 384 GMLADPKEARAGIREIHFLPFNPTDKRTALTYLDGEGKMHRVSKGAPEQILHLAHNKSDI 443
Query: 121 GRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRR 180
R+V+AVI+KFAERGLRSLAVAYQEVPEG KES+G PWQFI L+PLFDPP HDSAETIRR
Sbjct: 444 ERRVHAVIDKFAERGLRSLAVAYQEVPEGRKESAGGPWQFIALLPLFDPPRHDSAETIRR 503
Query: 181 ALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240
AL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ +DESI ALPVDELIEKAD
Sbjct: 504 ALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQTKDESISALPVDELIEKAD 563
Query: 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 300
GFAGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAV DATDAARSA+DIV
Sbjct: 564 GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVDDATDAARSASDIV 623
Query: 301 LTEPGLNVIITAVLISRAIFQRMRNYMVRGI 331
LTEPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 624 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 654
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Nicotiana plumbaginifolia (taxid: 4092) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P22180|PMA1_SOLLC Plasma membrane ATPase 1 OS=Solanum lycopersicum GN=LHA1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 572 bits (1473), Expect = e-162, Method: Compositional matrix adjust.
Identities = 274/331 (82%), Positives = 300/331 (90%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIV 60
MAGMDVLC DKTGTLTLNKLTVDK LIE+FA G+DADTVVLMAARAS++EN D ID AIV
Sbjct: 324 MAGMDVLCSDKTGTLTLNKLTVDKALIEVFAKGIDADTVVLMAARASRIENQDAIDTAIV 383
Query: 61 GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKI 120
GMLADPKEARA I+E+HFLPF+PT KRTALTY+D EGKMHRV+KG+PEQILNL HNKS I
Sbjct: 384 GMLADPKEARAGIREIHFLPFNPTDKRTALTYLDGEGKMHRVSKGAPEQILNLAHNKSDI 443
Query: 121 GRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRR 180
R+V+ VI+KFAERGLRSL VAYQEVPEG KES+G PWQFI L+PLFDPP HDSAETIRR
Sbjct: 444 ERRVHTVIDKFAERGLRSLGVAYQEVPEGRKESAGGPWQFIALLPLFDPPRHDSAETIRR 503
Query: 181 ALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240
AL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ +DESI ALP+DELIEKAD
Sbjct: 504 ALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQTKDESIAALPIDELIEKAD 563
Query: 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 300
GFAGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAV DATDAARSA+DIV
Sbjct: 564 GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVDDATDAARSASDIV 623
Query: 301 LTEPGLNVIITAVLISRAIFQRMRNYMVRGI 331
LTEPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 624 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 654
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Solanum lycopersicum (taxid: 4081) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q7XPY2|PMA1_ORYSJ Plasma membrane ATPase OS=Oryza sativa subsp. japonica GN=Os04g0656100 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 536 bits (1381), Expect = e-151, Method: Compositional matrix adjust.
Identities = 264/368 (71%), Positives = 300/368 (81%), Gaps = 16/368 (4%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIV 60
MAGMDVLC DKTGTLTLNKL+VDKNL+E+F GVD D V+L+AARAS+ EN D IDAA+V
Sbjct: 320 MAGMDVLCSDKTGTLTLNKLSVDKNLVEVFTKGVDKDHVLLLAARASRTENQDAIDAAMV 379
Query: 61 GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKI 120
GMLADPKEARA I+EVHFLPF+P KRTALTYID++G HR +KG+PEQIL L + K +
Sbjct: 380 GMLADPKEARAGIREVHFLPFNPVDKRTALTYIDADGNWHRASKGAPEQILTLCNCKEDV 439
Query: 121 GRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRR 180
RKV+AVI+K+AERGLRSLAVA QEVPE SKES+G PWQF+GL+PLFDPP HDSAETIR+
Sbjct: 440 KRKVHAVIDKYAERGLRSLAVARQEVPEKSKESAGGPWQFVGLLPLFDPPRHDSAETIRK 499
Query: 181 ALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240
AL LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ++D S+ ALPVDELIEKAD
Sbjct: 500 ALHLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDASLEALPVDELIEKAD 559
Query: 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 300
GFAGVFPEHKYEIVK LQ + HI GM G+GVNDAPALKKADIGIAVADATDAARSA+DIV
Sbjct: 560 GFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 619
Query: 301 LTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELNFLFTLDTVIAILQT 360
LTEPGL+VII+AVL SR IFQRM+NY + + T+ V+ L
Sbjct: 620 LTEPGLSVIISAVLTSRCIFQRMKNYTIYAVS----------------ITIRIVLGFLLI 663
Query: 361 AFTSKKDF 368
A K DF
Sbjct: 664 ALIWKYDF 671
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9SJB3|PMA5_ARATH ATPase 5, plasma membrane-type OS=Arabidopsis thaliana GN=AHA5 PE=3 SV=3 | Back alignment and function description |
|---|
Score = 533 bits (1372), Expect = e-150, Method: Compositional matrix adjust.
Identities = 255/331 (77%), Positives = 287/331 (86%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIV 60
MAGMDVLCCDKTGTLTLNKLTVDKNL+E+FA GV + V L+AARAS++EN D IDAAIV
Sbjct: 320 MAGMDVLCCDKTGTLTLNKLTVDKNLVEVFAKGVGKEHVFLLAARASRIENQDAIDAAIV 379
Query: 61 GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKI 120
GMLADPKEARA ++EVHF PF+P KRTALTY+DS+G HR +KG+PEQILNL + K +
Sbjct: 380 GMLADPKEARAGVREVHFFPFNPVDKRTALTYVDSDGNWHRASKGAPEQILNLCNCKEDV 439
Query: 121 GRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRR 180
RKV+ VI+KFAERGLRSLAVA QEV E K++ G PWQ +GL+PLFDPP HDSAETIRR
Sbjct: 440 RRKVHGVIDKFAERGLRSLAVARQEVLEKKKDAPGGPWQLVGLLPLFDPPRHDSAETIRR 499
Query: 181 ALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240
AL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ +D S+ ALPVDELIEKAD
Sbjct: 500 ALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQVKDSSLGALPVDELIEKAD 559
Query: 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 300
GFAGVFPEHKYEIV LQ RNHICGM G+GVNDAPALKKADIGIAV DATDAAR A+DIV
Sbjct: 560 GFAGVFPEHKYEIVHRLQQRNHICGMTGDGVNDAPALKKADIGIAVVDATDAARGASDIV 619
Query: 301 LTEPGLNVIITAVLISRAIFQRMRNYMVRGI 331
LTEPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 620 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 650
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P83970|PMA1_WHEAT Plasma membrane ATPase OS=Triticum aestivum GN=ha1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 528 bits (1361), Expect = e-149, Method: Compositional matrix adjust.
Identities = 254/331 (76%), Positives = 289/331 (87%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIV 60
+AGMDVLC DKTGTLTLNKL+VDKNL+E+FA GVD + V+L+AARAS+VEN D IDA +V
Sbjct: 320 LAGMDVLCSDKTGTLTLNKLSVDKNLVEVFAKGVDKEHVLLLAARASRVENQDAIDACMV 379
Query: 61 GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKI 120
GMLADPKEARA I+EVHFLPF+PT KRTALTYID+EG HR +KG+PEQI+ L + K +
Sbjct: 380 GMLADPKEARAGIREVHFLPFNPTDKRTALTYIDAEGNWHRASKGAPEQIITLCNCKEDV 439
Query: 121 GRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRR 180
RKV++VI K+AERGLRSLAVA QEVPE SK+S G PWQFIGL+PLFDPP HDSAETIR+
Sbjct: 440 KRKVHSVIEKYAERGLRSLAVARQEVPEKSKDSPGGPWQFIGLLPLFDPPRHDSAETIRK 499
Query: 181 ALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240
AL LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ +D S+ +LPVDELIEKAD
Sbjct: 500 ALVLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQSKDGSLESLPVDELIEKAD 559
Query: 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 300
GFAGVFPEHKYEIVK LQ + HI GM G+GVNDAPALKKADIGIAV DATDAARSA+DIV
Sbjct: 560 GFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKADIGIAVDDATDAARSASDIV 619
Query: 301 LTEPGLNVIITAVLISRAIFQRMRNYMVRGI 331
LTEPGL+VII+AVL SR IFQRM+NY + +
Sbjct: 620 LTEPGLSVIISAVLTSRCIFQRMKNYTIYAV 650
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Triticum aestivum (taxid: 4565) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P20431|PMA3_ARATH ATPase 3, plasma membrane-type OS=Arabidopsis thaliana GN=AHA3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 523 bits (1346), Expect = e-147, Method: Compositional matrix adjust.
Identities = 246/331 (74%), Positives = 293/331 (88%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIV 60
MAGMDVLC DKTGTLTLNKL+VDKNLIE++ GV+ D V+L AARAS+VEN D IDAA+V
Sbjct: 321 MAGMDVLCSDKTGTLTLNKLSVDKNLIEVYCKGVEKDEVLLFAARASRVENQDAIDAAMV 380
Query: 61 GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKI 120
GMLADPKEARA I+E+HFLPF+P KRTALT+IDS G HRV+KG+PEQIL+L + ++ +
Sbjct: 381 GMLADPKEARAGIREIHFLPFNPVDKRTALTFIDSNGNWHRVSKGAPEQILDLCNARADL 440
Query: 121 GRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRR 180
++V++ I+K+AERGLRSLAV+ Q VPE +KESSGSPW+F+G++PLFDPP HDSAETIRR
Sbjct: 441 RKRVHSTIDKYAERGLRSLAVSRQTVPEKTKESSGSPWEFVGVLPLFDPPRHDSAETIRR 500
Query: 181 ALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240
AL LG+ VKMITGDQLAIAKETGRRLGMG+NMYPSS+L G+ +DE++ +PV++LIEKAD
Sbjct: 501 ALDLGVNVKMITGDQLAIAKETGRRLGMGSNMYPSSSLLGKHKDEAMAHIPVEDLIEKAD 560
Query: 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 300
GFAGVFPEHKYEIVK LQ R HICGM G+GVNDAPALKKADIGIAVADATDAAR A+DIV
Sbjct: 561 GFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIV 620
Query: 301 LTEPGLNVIITAVLISRAIFQRMRNYMVRGI 331
LTEPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 621 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 651
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 450 | ||||||
| 449440750 | 959 | PREDICTED: ATPase 4, plasma membrane-typ | 0.735 | 0.345 | 0.851 | 1e-164 | |
| 225456641 | 956 | PREDICTED: ATPase 11, plasma membrane-ty | 0.815 | 0.383 | 0.780 | 1e-164 | |
| 224121558 | 966 | autoinhibited H+ ATPase [Populus trichoc | 0.684 | 0.318 | 0.851 | 1e-164 | |
| 31580855 | 956 | plasma membrane H+-ATPase [Sesbania rost | 0.735 | 0.346 | 0.845 | 1e-164 | |
| 449528800 | 959 | PREDICTED: LOW QUALITY PROTEIN: ATPase 4 | 0.735 | 0.345 | 0.848 | 1e-164 | |
| 6759599 | 956 | plasma membrane H+ ATPase [Prunus persic | 0.684 | 0.322 | 0.842 | 1e-163 | |
| 30692952 | 960 | H(+)-ATPase 4 [Arabidopsis thaliana] gi| | 0.735 | 0.344 | 0.842 | 1e-163 | |
| 33943131 | 956 | plasma membrane H+-ATPase [Juglans regia | 0.815 | 0.383 | 0.775 | 1e-162 | |
| 224135653 | 967 | autoinhibited H+ ATPase [Populus trichoc | 0.735 | 0.342 | 0.849 | 1e-162 | |
| 297793855 | 956 | AHA11-ATPASE 11 [Arabidopsis lyrata subs | 0.688 | 0.324 | 0.836 | 1e-162 |
| >gi|449440750|ref|XP_004138147.1| PREDICTED: ATPase 4, plasma membrane-type-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 282/331 (85%), Positives = 305/331 (92%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIV 60
MAGMDVLC DKTGTLTLNKLTVDKNL+E+FA GVD DTVVLMAARAS+ EN D ID AIV
Sbjct: 327 MAGMDVLCSDKTGTLTLNKLTVDKNLVEVFAKGVDVDTVVLMAARASRTENQDAIDTAIV 386
Query: 61 GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKI 120
GMLADPKEARA IQEVHFLPF+PT KRTALTYID EGKMHRV+KG+PEQILNL HNKS+I
Sbjct: 387 GMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDHEGKMHRVSKGAPEQILNLAHNKSEI 446
Query: 121 GRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRR 180
RKV+AVI+KFAERGLRSLAVAYQEVP+G KES+G PWQF+GL+PLFDPP HDSAETIRR
Sbjct: 447 ERKVHAVIDKFAERGLRSLAVAYQEVPDGRKESAGGPWQFVGLLPLFDPPRHDSAETIRR 506
Query: 181 ALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240
AL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQD+DESI ALPVDELIEKAD
Sbjct: 507 ALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPVDELIEKAD 566
Query: 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 300
GFAGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAARSA+DIV
Sbjct: 567 GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 626
Query: 301 LTEPGLNVIITAVLISRAIFQRMRNYMVRGI 331
LTEPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 627 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 657
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225456641|ref|XP_002270344.1| PREDICTED: ATPase 11, plasma membrane-type [Vitis vinifera] gi|297734039|emb|CBI15286.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 292/374 (78%), Positives = 321/374 (85%), Gaps = 7/374 (1%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIV 60
MAGMDVLC DKTGTLTLNKLTVDKNLIE+FA GVD DTVVLMAARAS++EN D ID AIV
Sbjct: 324 MAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDPDTVVLMAARASRIENQDAIDTAIV 383
Query: 61 GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKI 120
GMLADPKEARA IQEVHFLPF+PT KRTALTYIDSEGKMHRV+KG+PEQILNL NKS+I
Sbjct: 384 GMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLARNKSEI 443
Query: 121 GRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRR 180
R+V+AVI+KFAERGLRSLAVAYQEVP+G KES+G PWQFIGL+PLFDPP HDSAETIRR
Sbjct: 444 ERRVHAVIDKFAERGLRSLAVAYQEVPDGRKESAGGPWQFIGLMPLFDPPRHDSAETIRR 503
Query: 181 ALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240
AL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ++DESI ALP+DELIEKAD
Sbjct: 504 ALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDESIAALPIDELIEKAD 563
Query: 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 300
GFAGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAARSA+DIV
Sbjct: 564 GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
Query: 301 LTEPGLNVIITAVLISRAIFQRMRNYMVRGID-----GLSSTEFIQVLELNFLFTLDTVI 355
LTEPGL+VII+AVL SRAIFQRM+NY + + L + E +F + +I
Sbjct: 624 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWEFDFPPFMVLII 683
Query: 356 AILQ--TAFTSKKD 367
AIL T T KD
Sbjct: 684 AILNDGTIMTISKD 697
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224121558|ref|XP_002318614.1| autoinhibited H+ ATPase [Populus trichocarpa] gi|222859287|gb|EEE96834.1| autoinhibited H+ ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 583 bits (1503), Expect = e-164, Method: Compositional matrix adjust.
Identities = 282/331 (85%), Positives = 305/331 (92%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIV 60
MAGMDVLC DKTGTLTLNKLTVDKNLIE+FA GVDAD VVLMAARAS++EN D ID AIV
Sbjct: 334 MAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDADAVVLMAARASRIENQDAIDTAIV 393
Query: 61 GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKI 120
GMLADPKEARA IQEVHFLPF+PT KRTALTYIDS GKMHRV+KG+PEQILNL HNKS I
Sbjct: 394 GMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDSGGKMHRVSKGAPEQILNLSHNKSDI 453
Query: 121 GRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRR 180
R+V+AVI+KFAERGLRSLAVAYQEVPEG KES+G PWQFIGL+PLFDPP HDSAETIRR
Sbjct: 454 ERRVHAVIDKFAERGLRSLAVAYQEVPEGRKESAGGPWQFIGLLPLFDPPRHDSAETIRR 513
Query: 181 ALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240
AL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ++DESI ALP+DELIEKAD
Sbjct: 514 ALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDESIAALPIDELIEKAD 573
Query: 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 300
GFAGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAARSA+DIV
Sbjct: 574 GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 633
Query: 301 LTEPGLNVIITAVLISRAIFQRMRNYMVRGI 331
LTEPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 634 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 664
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|31580855|dbj|BAC77532.1| plasma membrane H+-ATPase [Sesbania rostrata] | Back alignment and taxonomy information |
|---|
Score = 583 bits (1503), Expect = e-164, Method: Compositional matrix adjust.
Identities = 280/331 (84%), Positives = 306/331 (92%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIV 60
MAGMDVLC DKTGTLTLNKLTVDKNL+E+FA GVDADTVVLMAARAS++EN D ID AIV
Sbjct: 324 MAGMDVLCSDKTGTLTLNKLTVDKNLVEVFAKGVDADTVVLMAARASRLENQDAIDTAIV 383
Query: 61 GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKI 120
GMLADPKEARA IQEVHFLPF+PT KRTALTYID +GKMHRV+KG+PEQILNL HNK+ I
Sbjct: 384 GMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDQDGKMHRVSKGAPEQILNLAHNKTDI 443
Query: 121 GRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRR 180
R+V+AVI+KFAERGLRSLAVAYQEVP+G KES+G PWQFIGL+PLFDPP HDSAETIRR
Sbjct: 444 ERRVHAVIDKFAERGLRSLAVAYQEVPDGRKESAGGPWQFIGLMPLFDPPRHDSAETIRR 503
Query: 181 ALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240
AL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQD+DESI ALP+DELIEKAD
Sbjct: 504 ALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKAD 563
Query: 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 300
GFAGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAARSA+DIV
Sbjct: 564 GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
Query: 301 LTEPGLNVIITAVLISRAIFQRMRNYMVRGI 331
LTEPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 624 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 654
|
Source: Sesbania rostrata Species: Sesbania rostrata Genus: Sesbania Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449528800|ref|XP_004171391.1| PREDICTED: LOW QUALITY PROTEIN: ATPase 4, plasma membrane-type-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 583 bits (1503), Expect = e-164, Method: Compositional matrix adjust.
Identities = 281/331 (84%), Positives = 305/331 (92%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIV 60
MAGMDVLC DKTGTLTLNKLTVDKNL+E+FA GVD DTVVLMAARAS+ EN D ID AIV
Sbjct: 327 MAGMDVLCSDKTGTLTLNKLTVDKNLVEVFAKGVDVDTVVLMAARASRTENQDAIDTAIV 386
Query: 61 GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKI 120
GMLADPKEARA IQEVHFLPF+PT KRTALTYID EGKMHRV+KG+PEQILNL HNKS+I
Sbjct: 387 GMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDHEGKMHRVSKGAPEQILNLAHNKSEI 446
Query: 121 GRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRR 180
RKV+AVI+KFAERGLRSLAVAYQEVP+G KES+G PWQF+GL+PLFDPP H+SAETIRR
Sbjct: 447 ERKVHAVIDKFAERGLRSLAVAYQEVPDGRKESAGGPWQFVGLLPLFDPPRHESAETIRR 506
Query: 181 ALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240
AL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQD+DESI ALPVDELIEKAD
Sbjct: 507 ALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPVDELIEKAD 566
Query: 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 300
GFAGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAARSA+DIV
Sbjct: 567 GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 626
Query: 301 LTEPGLNVIITAVLISRAIFQRMRNYMVRGI 331
LTEPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 627 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 657
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|6759599|emb|CAB69824.1| plasma membrane H+ ATPase [Prunus persica] | Back alignment and taxonomy information |
|---|
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 279/331 (84%), Positives = 305/331 (92%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIV 60
MAGMDVLC DKTGTLTLNKLTVDKNLIE+FA G+D DTVVLMAARAS+VEN D ID AIV
Sbjct: 324 MAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGMDPDTVVLMAARASRVENQDAIDTAIV 383
Query: 61 GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKI 120
GMLADPKEARA +QE+HFLPF+PT KRTALTY+D +GKMHRV+KG+PEQILNL HNKS I
Sbjct: 384 GMLADPKEARAGVQELHFLPFNPTDKRTALTYLDRDGKMHRVSKGAPEQILNLAHNKSDI 443
Query: 121 GRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRR 180
R+V+AVI+KFAERGLRSLAVAYQEVPEG KES+G PWQF+GL+PLFDPP HDSAETIRR
Sbjct: 444 ERRVHAVIDKFAERGLRSLAVAYQEVPEGRKESAGGPWQFVGLMPLFDPPRHDSAETIRR 503
Query: 181 ALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240
AL LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQD+DESIVALP+DELIEKAD
Sbjct: 504 ALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIVALPIDELIEKAD 563
Query: 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 300
GFAGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAARSA+DIV
Sbjct: 564 GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
Query: 301 LTEPGLNVIITAVLISRAIFQRMRNYMVRGI 331
LTEPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 624 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 654
|
Source: Prunus persica Species: Prunus persica Genus: Prunus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|30692952|ref|NP_190378.2| H(+)-ATPase 4 [Arabidopsis thaliana] gi|83305346|sp|Q9SU58.2|PMA4_ARATH RecName: Full=ATPase 4, plasma membrane-type; AltName: Full=Proton pump 4 gi|26451228|dbj|BAC42716.1| putative H+-transporting ATPase [Arabidopsis thaliana] gi|332644829|gb|AEE78350.1| H(+)-ATPase 4 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 279/331 (84%), Positives = 307/331 (92%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIV 60
MAGMDVLC DKTGTLTLNKLTVDKNLIE+F GVDADTVVLMAARAS++EN D IDAAIV
Sbjct: 328 MAGMDVLCSDKTGTLTLNKLTVDKNLIEVFMKGVDADTVVLMAARASRLENQDAIDAAIV 387
Query: 61 GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKI 120
GMLADPK+ARA IQEVHFLPF+PT KRTALTYID+EG HRV+KG+PEQILNL HNKS+I
Sbjct: 388 GMLADPKDARAGIQEVHFLPFNPTDKRTALTYIDNEGNTHRVSKGAPEQILNLAHNKSEI 447
Query: 121 GRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRR 180
R+V+AVI+KFAERGLRSLAVAYQ+VPEG K+S+G PWQF+GL+PLFDPP HDSAETIRR
Sbjct: 448 ERRVHAVIDKFAERGLRSLAVAYQDVPEGRKDSAGGPWQFVGLMPLFDPPRHDSAETIRR 507
Query: 181 ALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240
AL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ++DESIVALPVDELIEKAD
Sbjct: 508 ALNLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKAD 567
Query: 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 300
GFAGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAARSA+DIV
Sbjct: 568 GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 627
Query: 301 LTEPGLNVIITAVLISRAIFQRMRNYMVRGI 331
LTEPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 628 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 658
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|33943131|gb|AAQ55291.1| plasma membrane H+-ATPase [Juglans regia] | Back alignment and taxonomy information |
|---|
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 290/374 (77%), Positives = 319/374 (85%), Gaps = 7/374 (1%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIV 60
MAGMDVLC DKTGTLTLNKL+VDK LIE+F GVDAD VVLMAARAS+VEN D ID+AIV
Sbjct: 324 MAGMDVLCSDKTGTLTLNKLSVDKALIEVFTKGVDADAVVLMAARASRVENQDAIDSAIV 383
Query: 61 GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKI 120
GMLADPKEARA IQEVHFLPF+PT KRTALTYID +GKMHRV+KG+PEQILNL HNKS I
Sbjct: 384 GMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDRDGKMHRVSKGAPEQILNLAHNKSDI 443
Query: 121 GRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRR 180
R+V+AVI+KFAERGLRSLAVAYQEVPEG KES+G PWQFIGL+PLFDPP HDSAETIRR
Sbjct: 444 ERRVHAVIDKFAERGLRSLAVAYQEVPEGRKESAGGPWQFIGLMPLFDPPRHDSAETIRR 503
Query: 181 ALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240
AL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ++DESI ALP+DELIEKAD
Sbjct: 504 ALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDESIAALPIDELIEKAD 563
Query: 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 300
GFAGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAARSA+DIV
Sbjct: 564 GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
Query: 301 LTEPGLNVIITAVLISRAIFQRMRNYMVRGID-----GLSSTEFIQVLELNFLFTLDTVI 355
LTEPGL+VII+AVL SRAIFQRM+NY + + L + E +F + +I
Sbjct: 624 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWEFDFPPFMVLII 683
Query: 356 AILQ--TAFTSKKD 367
AIL T T KD
Sbjct: 684 AILNDGTIMTISKD 697
|
Source: Juglans regia Species: Juglans regia Genus: Juglans Family: Juglandaceae Order: Fagales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224135653|ref|XP_002322127.1| autoinhibited H+ ATPase [Populus trichocarpa] gi|222869123|gb|EEF06254.1| autoinhibited H+ ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 282/332 (84%), Positives = 306/332 (92%), Gaps = 1/332 (0%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEI-FAGGVDADTVVLMAARASQVENLDVIDAAI 59
MAGMDVLC DKTGTLTLNKLTVDKNLIE+ FA GVDADTVVLMAA+AS++EN D ID AI
Sbjct: 334 MAGMDVLCSDKTGTLTLNKLTVDKNLIEVVFAKGVDADTVVLMAAQASRIENQDAIDTAI 393
Query: 60 VGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSK 119
VGMLADPKEARA IQEVHFLPF+PT KRTALTYIDS G MHRV+KG+PEQILNL HNKS
Sbjct: 394 VGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDSGGIMHRVSKGAPEQILNLAHNKSD 453
Query: 120 IGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIR 179
I R+V+AVI+KFAERGLRSLAVAYQ+VPEG KES+G PWQFIGL+PLFDPP HDSAETIR
Sbjct: 454 IERRVHAVIDKFAERGLRSLAVAYQKVPEGRKESAGGPWQFIGLMPLFDPPRHDSAETIR 513
Query: 180 RALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKA 239
RAL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQD+DESIVALP+DELIEKA
Sbjct: 514 RALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIVALPIDELIEKA 573
Query: 240 DGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADI 299
DGFAGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAARSA+DI
Sbjct: 574 DGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI 633
Query: 300 VLTEPGLNVIITAVLISRAIFQRMRNYMVRGI 331
VLTEPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 634 VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 665
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297793855|ref|XP_002864812.1| AHA11-ATPASE 11 [Arabidopsis lyrata subsp. lyrata] gi|297310647|gb|EFH41071.1| AHA11-ATPASE 11 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 277/331 (83%), Positives = 308/331 (93%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIV 60
MAGMDVLC DKTGTLTLNKLTVDKNLIE+F GVDADTVVLMAA+AS++EN D IDAAIV
Sbjct: 324 MAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRLENQDAIDAAIV 383
Query: 61 GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKI 120
GMLADPKEARA ++EVHFLPF+PT KRTALTYIDS+GKMHRV+KG+PEQILNL HNK++I
Sbjct: 384 GMLADPKEARAGVREVHFLPFNPTDKRTALTYIDSDGKMHRVSKGAPEQILNLAHNKAEI 443
Query: 121 GRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRR 180
R+V+AVI+KFAERGLRSLAVAYQEVPEG+KES+G PWQF+GL+PLFDPP HDSAETIRR
Sbjct: 444 ERRVHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGPWQFMGLMPLFDPPRHDSAETIRR 503
Query: 181 ALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240
AL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ +DESI ALP+D+LIEKAD
Sbjct: 504 ALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQHKDESIGALPIDDLIEKAD 563
Query: 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 300
GFAGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAARSA+DIV
Sbjct: 564 GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
Query: 301 LTEPGLNVIITAVLISRAIFQRMRNYMVRGI 331
LTEPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 624 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 654
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 450 | ||||||
| TAIR|locus:2097895 | 960 | HA4 "H(+)-ATPase 4" [Arabidops | 0.813 | 0.381 | 0.72 | 2.2e-163 | |
| TAIR|locus:2172244 | 956 | HA11 "H(+)-ATPase 11" [Arabido | 0.813 | 0.382 | 0.712 | 9.5e-163 | |
| TAIR|locus:2046623 | 949 | HA5 "H(+)-ATPase 5" [Arabidops | 0.815 | 0.386 | 0.665 | 4.1e-149 | |
| TAIR|locus:2044450 | 949 | HA1 "H(+)-ATPase 1" [Arabidops | 0.815 | 0.386 | 0.649 | 8.9e-143 | |
| TAIR|locus:2096549 | 948 | HA8 "H(+)-ATPase 8" [Arabidops | 0.735 | 0.349 | 0.688 | 3.8e-142 | |
| TAIR|locus:2025727 | 954 | HA9 "H(+)-ATPase 9" [Arabidops | 0.815 | 0.384 | 0.617 | 6.2e-142 | |
| TAIR|locus:2165600 | 949 | HA3 "H(+)-ATPase 3" [Arabidops | 0.815 | 0.386 | 0.639 | 5.6e-141 | |
| TAIR|locus:2053343 | 949 | HA6 "H(+)-ATPase 6" [Arabidops | 0.813 | 0.385 | 0.622 | 1.7e-139 | |
| TAIR|locus:2081932 | 961 | HA7 "H(+)-ATPase 7" [Arabidops | 0.808 | 0.378 | 0.633 | 2.3e-131 | |
| TAIR|locus:2020372 | 947 | AHA10 "autoinhibited H(+)-ATPa | 0.813 | 0.386 | 0.641 | 1.5e-127 |
| TAIR|locus:2097895 HA4 "H(+)-ATPase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1332 (473.9 bits), Expect = 2.2e-163, Sum P(2) = 2.2e-163
Identities = 270/375 (72%), Positives = 304/375 (81%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIV 60
MAGMDVLC DKTGTLTLNKLTVDKNLIE+F GVDADTVVLMAARAS++EN D IDAAIV
Sbjct: 328 MAGMDVLCSDKTGTLTLNKLTVDKNLIEVFMKGVDADTVVLMAARASRLENQDAIDAAIV 387
Query: 61 GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKI 120
GMLADPK+ARA IQEVHFLPF+PT KRTALTYID+EG HRV+KG+PEQILNL HNKS+I
Sbjct: 388 GMLADPKDARAGIQEVHFLPFNPTDKRTALTYIDNEGNTHRVSKGAPEQILNLAHNKSEI 447
Query: 121 GRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRR 180
R+V+AVI+KFAERGLRSLAVAYQ+VPEG K+S+G PWQF+GL+PLFDPP HDSAETIRR
Sbjct: 448 ERRVHAVIDKFAERGLRSLAVAYQDVPEGRKDSAGGPWQFVGLMPLFDPPRHDSAETIRR 507
Query: 181 ALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240
AL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ++DESIVALPVDELIEKAD
Sbjct: 508 ALNLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKAD 567
Query: 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXXXXXXXV 300
GFAGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKK V
Sbjct: 568 GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 627
Query: 301 LTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELNFLFTLD------TV 354
LTEPGL+VII+AVL SRAIFQRM+NY + + ++ + + L ++ D +
Sbjct: 628 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS-ITIRIVLGFMLLALIWQFDFPPFMVLI 686
Query: 355 IAILQ--TAFTSKKD 367
IAIL T T KD
Sbjct: 687 IAILNDGTIMTISKD 701
|
|
| TAIR|locus:2172244 HA11 "H(+)-ATPase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1325 (471.5 bits), Expect = 9.5e-163, Sum P(2) = 9.5e-163
Identities = 267/375 (71%), Positives = 305/375 (81%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIV 60
MAGMDVLC DKTGTLTLNKLTVDKNLIE+F GVDADTVVLMAA+AS++EN D IDAAIV
Sbjct: 324 MAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRLENQDAIDAAIV 383
Query: 61 GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKI 120
GMLADPKEARA ++EVHFLPF+PT KRTALTYIDS+GKMHRV+KG+PEQILNL HN+++I
Sbjct: 384 GMLADPKEARAGVREVHFLPFNPTDKRTALTYIDSDGKMHRVSKGAPEQILNLAHNRAEI 443
Query: 121 GRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRR 180
R+V+AVI+KFAERGLRSLAVAYQEVPEG+KES+G PWQF+GL+PLFDPP HDSAETIRR
Sbjct: 444 ERRVHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGPWQFMGLMPLFDPPRHDSAETIRR 503
Query: 181 ALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240
AL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ +DESI ALP+D+LIEKAD
Sbjct: 504 ALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQHKDESIGALPIDDLIEKAD 563
Query: 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXXXXXXXV 300
GFAGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKK V
Sbjct: 564 GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
Query: 301 LTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELNFLFTLD------TV 354
LTEPGL+VII+AVL SRAIFQRM+NY + + ++ + + L ++ D +
Sbjct: 624 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS-ITIRIVLGFMLLALIWKFDFPPFMVLI 682
Query: 355 IAILQ--TAFTSKKD 367
IAIL T T KD
Sbjct: 683 IAILNDGTIMTISKD 697
|
|
| TAIR|locus:2046623 HA5 "H(+)-ATPase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1222 (435.2 bits), Expect = 4.1e-149, Sum P(2) = 4.1e-149
Identities = 249/374 (66%), Positives = 287/374 (76%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIV 60
MAGMDVLCCDKTGTLTLNKLTVDKNL+E+FA GV + V L+AARAS++EN D IDAAIV
Sbjct: 320 MAGMDVLCCDKTGTLTLNKLTVDKNLVEVFAKGVGKEHVFLLAARASRIENQDAIDAAIV 379
Query: 61 GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKI 120
GMLADPKEARA ++EVHF PF+P KRTALTY+DS+G HR +KG+PEQILNL + K +
Sbjct: 380 GMLADPKEARAGVREVHFFPFNPVDKRTALTYVDSDGNWHRASKGAPEQILNLCNCKEDV 439
Query: 121 GRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRR 180
RKV+ VI+KFAERGLRSLAVA QEV E K++ G PWQ +GL+PLFDPP HDSAETIRR
Sbjct: 440 RRKVHGVIDKFAERGLRSLAVARQEVLEKKKDAPGGPWQLVGLLPLFDPPRHDSAETIRR 499
Query: 181 ALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240
AL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ +D S+ ALPVDELIEKAD
Sbjct: 500 ALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQVKDSSLGALPVDELIEKAD 559
Query: 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXXXXXXXV 300
GFAGVFPEHKYEIV LQ RNHICGM G+GVNDAPALKK V
Sbjct: 560 GFAGVFPEHKYEIVHRLQQRNHICGMTGDGVNDAPALKKADIGIAVVDATDAARGASDIV 619
Query: 301 LTEPGLNVIITAVLISRAIFQRMRNYMVRGIDG----LSSTEFIQVL-ELNFLFTLDTVI 355
LTEPGL+VII+AVL SRAIFQRM+NY + + + FI ++ + +F + +I
Sbjct: 620 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWQFDFSPFMVLII 679
Query: 356 AILQ--TAFTSKKD 367
AIL T T KD
Sbjct: 680 AILNDGTIMTISKD 693
|
|
| TAIR|locus:2044450 HA1 "H(+)-ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1190 (424.0 bits), Expect = 8.9e-143, Sum P(2) = 8.9e-143
Identities = 243/374 (64%), Positives = 286/374 (76%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIV 60
MAGMDVLC DKTGTLTLNKL+VDKNL+E+F GV+ D V+L AA AS+VEN D IDAA+V
Sbjct: 320 MAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDAIDAAMV 379
Query: 61 GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKI 120
GMLADPKEARA I+EVHFLPF+P KRTALTYIDS+G HRV+KG+PEQIL+L + + +
Sbjct: 380 GMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGNWHRVSKGAPEQILDLANARPDL 439
Query: 121 GRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRR 180
+KV + I+K+AERGLRSLAVA Q VPE +KES G PW+F+GL+PLFDPP HDSAETIRR
Sbjct: 440 RKKVLSCIDKYAERGLRSLAVARQVVPEKTKESPGGPWEFVGLLPLFDPPRHDSAETIRR 499
Query: 181 ALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240
AL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPS+AL G D+D +I ++PV+ELIEKAD
Sbjct: 500 ALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSAALLGTDKDSNIASIPVEELIEKAD 559
Query: 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXXXXXXXV 300
GFAGVFPEHKYEIVK LQ R HI GM G+GVNDAPALKK V
Sbjct: 560 GFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARGASDIV 619
Query: 301 LTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEF----IQVL-ELNFLFTLDTVI 355
LTEPGL+VII+AVL SRAIFQRM+NY + + F I ++ E +F + +I
Sbjct: 620 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWEFDFSAFMVLII 679
Query: 356 AILQ--TAFTSKKD 367
AIL T T KD
Sbjct: 680 AILNDGTIMTISKD 693
|
|
| TAIR|locus:2096549 HA8 "H(+)-ATPase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1175 (418.7 bits), Expect = 3.8e-142, Sum P(2) = 3.8e-142
Identities = 228/331 (68%), Positives = 264/331 (79%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIV 60
MAGMDVLC DKTGTLTLNKL+VDK+LIE+F +D+D+VVLMAARAS++EN D IDA+IV
Sbjct: 323 MAGMDVLCSDKTGTLTLNKLSVDKSLIEVFPKNMDSDSVVLMAARASRIENQDAIDASIV 382
Query: 61 GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKI 120
GML DPKEARA I EVHFLPF+P KRTA+TYID G HR +KG+PEQI+ L + + +
Sbjct: 383 GMLGDPKEARAGITEVHFLPFNPVDKRTAITYIDESGDWHRSSKGAPEQIIELCNLQGET 442
Query: 121 GRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRR 180
RK + VI+ FAERGLRSL VA Q VPE +KES GSPW+F+GL+PLFDPP HDSAETIRR
Sbjct: 443 KRKAHEVIDGFAERGLRSLGVAQQTVPEKTKESDGSPWEFVGLLPLFDPPRHDSAETIRR 502
Query: 181 ALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240
AL LG+ VKMITGDQLAI ETGRRLGMGTNMYPS++L G +DES+V +P+DELIEKAD
Sbjct: 503 ALELGVNVKMITGDQLAIGIETGRRLGMGTNMYPSTSLLGNSKDESLVGIPIDELIEKAD 562
Query: 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXXXXXXXV 300
GFAGVFPEHKYEIVK LQ R HICGM G+GVNDAPALKK V
Sbjct: 563 GFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 622
Query: 301 LTEPGLNVIITAVLISRAIFQRMRNYMVRGI 331
LTEPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 623 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 653
|
|
| TAIR|locus:2025727 HA9 "H(+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1150 (409.9 bits), Expect = 6.2e-142, Sum P(2) = 6.2e-142
Identities = 231/374 (61%), Positives = 273/374 (72%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIV 60
MAGMDVLC DKTGTLTLNKLTVDK+++E+F +D D +++ AARAS+VEN D IDA IV
Sbjct: 325 MAGMDVLCSDKTGTLTLNKLTVDKSMVEVFVKDLDKDQLLVNAARASRVENQDAIDACIV 384
Query: 61 GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKI 120
GML DP+EAR I EVHF PF+P KRTA+TYID+ G HRV+KG+PEQI+ L + +
Sbjct: 385 GMLGDPREAREGITEVHFFPFNPVDKRTAITYIDANGNWHRVSKGAPEQIIELCNLREDA 444
Query: 121 GRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRR 180
++ + +I+KFA+RGLRSLAV Q V E K S G PWQF+GL+PLFDPP HDSAETIRR
Sbjct: 445 SKRAHDIIDKFADRGLRSLAVGRQTVSEKDKNSPGEPWQFLGLLPLFDPPRHDSAETIRR 504
Query: 181 ALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240
AL LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQD+DESI +LPVDELIEKAD
Sbjct: 505 ALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIASLPVDELIEKAD 564
Query: 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXXXXXXXV 300
GFAGVFPEHKYEIVK LQ HICGM G+GVNDAPALK+ V
Sbjct: 565 GFAGVFPEHKYEIVKRLQEMKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIV 624
Query: 301 LTEPGLNVIITAVLISRAIFQRMRNYMVRGID-GLSSTEFIQVLELNFLFTLDT----VI 355
LTEPGL+VI++AVL SRAIFQRM+NY + + + +L L + F ++
Sbjct: 625 LTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVMGFMLLALIWKFDFSPFMVLIV 684
Query: 356 AILQ--TAFTSKKD 367
AIL T T KD
Sbjct: 685 AILNDGTIMTISKD 698
|
|
| TAIR|locus:2165600 HA3 "H(+)-ATPase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1191 (424.3 bits), Expect = 5.6e-141, Sum P(2) = 5.6e-141
Identities = 239/374 (63%), Positives = 289/374 (77%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIV 60
MAGMDVLC DKTGTLTLNKL+VDKNLIE++ GV+ D V+L AARAS+VEN D IDAA+V
Sbjct: 321 MAGMDVLCSDKTGTLTLNKLSVDKNLIEVYCKGVEKDEVLLFAARASRVENQDAIDAAMV 380
Query: 61 GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKI 120
GMLADPKEARA I+E+HFLPF+P KRTALT+IDS G HRV+KG+PEQIL+L + ++ +
Sbjct: 381 GMLADPKEARAGIREIHFLPFNPVDKRTALTFIDSNGNWHRVSKGAPEQILDLCNARADL 440
Query: 121 GRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRR 180
++V++ I+K+AERGLRSLAV+ Q VPE +KESSGSPW+F+G++PLFDPP HDSAETIRR
Sbjct: 441 RKRVHSTIDKYAERGLRSLAVSRQTVPEKTKESSGSPWEFVGVLPLFDPPRHDSAETIRR 500
Query: 181 ALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240
AL LG+ VKMITGDQLAIAKETGRRLGMG+NMYPSS+L G+ +DE++ +PV++LIEKAD
Sbjct: 501 ALDLGVNVKMITGDQLAIAKETGRRLGMGSNMYPSSSLLGKHKDEAMAHIPVEDLIEKAD 560
Query: 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXXXXXXXV 300
GFAGVFPEHKYEIVK LQ R HICGM G+GVNDAPALKK V
Sbjct: 561 GFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIV 620
Query: 301 LTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEF-IQVLELNFLFTLDT----VI 355
LTEPGL+VII+AVL SRAIFQRM+NY + + F ++ L + F +I
Sbjct: 621 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWKFDFSPFMVLII 680
Query: 356 AILQ--TAFTSKKD 367
AIL T T KD
Sbjct: 681 AILNDGTIMTISKD 694
|
|
| TAIR|locus:2053343 HA6 "H(+)-ATPase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1143 (407.4 bits), Expect = 1.7e-139, Sum P(2) = 1.7e-139
Identities = 233/374 (62%), Positives = 277/374 (74%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIV 60
MAGMDVLC DKTGTLTLNKLTVDKNLIE+F+ VD D V+L++ARAS+VEN D ID +IV
Sbjct: 323 MAGMDVLCSDKTGTLTLNKLTVDKNLIEVFSKDVDKDYVILLSARASRVENQDAIDTSIV 382
Query: 61 GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKI 120
ML DPKEARA I EVHFLPF+P KRTA+TYID+ G+ HR +KG+PEQI+ L K +
Sbjct: 383 NMLGDPKEARAGITEVHFLPFNPVEKRTAITYIDTNGEWHRCSKGAPEQIIELCDLKGET 442
Query: 121 GRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRR 180
R+ + +I+KFAERGLRSL VA Q VPE KES+G+PW+F+GL+PLFDPP HDSAETIRR
Sbjct: 443 KRRAHEIIDKFAERGLRSLGVARQRVPEKDKESAGTPWEFVGLLPLFDPPRHDSAETIRR 502
Query: 181 ALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240
AL LG+ VKMITGDQLAI KETGRRLGMGTNMYPSS+L +++D++ +PVDELIEKAD
Sbjct: 503 ALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL-ENKDDTTGGVPVDELIEKAD 561
Query: 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXXXXXXXV 300
GFAGVFPEHKYEIV+ LQ R HI GM G+GVNDAPALKK V
Sbjct: 562 GFAGVFPEHKYEIVRKLQERKHIVGMTGDGVNDAPALKKADIGIAVDDATDAARSASDIV 621
Query: 301 LTEPGLNVIITAVLISRAIFQRMRNYMVRGID-----GLSSTEFIQVLELNFLFTLDTVI 355
LTEPGL+VI++AVL SRAIFQRM+NY + + L + E +F + +I
Sbjct: 622 LTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLVALIWEFDFSPFMVLII 681
Query: 356 AILQ--TAFTSKKD 367
AIL T T KD
Sbjct: 682 AILNDGTIMTISKD 695
|
|
| TAIR|locus:2081932 HA7 "H(+)-ATPase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1164 (414.8 bits), Expect = 2.3e-131, Sum P(2) = 2.3e-131
Identities = 237/374 (63%), Positives = 277/374 (74%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIV 60
MAGMDVLC DKTGTLTLNKL+VDKNLIE+F G+D D VLMAARA+++EN D ID AIV
Sbjct: 323 MAGMDVLCSDKTGTLTLNKLSVDKNLIEVFKRGIDRDMAVLMAARAARLENQDAIDTAIV 382
Query: 61 GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKI 120
ML+DPKEARA I+E+HFLPF P +RTALTY+D EGKMHRV+KG+PE+IL++ HNK +I
Sbjct: 383 SMLSDPKEARAGIKELHFLPFSPANRRTALTYLDGEGKMHRVSKGAPEEILDMAHNKLEI 442
Query: 121 GRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRR 180
KV+A I+KFAERGLRSL +AYQEVP+G + G PW F+ L+PLFDPP HDSA+TI R
Sbjct: 443 KEKVHATIDKFAERGLRSLGLAYQEVPDGDVKGEGGPWDFVALLPLFDPPRHDSAQTIER 502
Query: 181 ALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240
AL LG+ VKMITGDQLAIAKETGRRLGMGTNMYPSS+L + E + VDELIE AD
Sbjct: 503 ALHLGVSVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLSDNNTEGV---SVDELIENAD 559
Query: 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXXXXXXXV 300
GFAGVFPEHKYEIVK LQ+R HICGM G+GVNDAPALKK V
Sbjct: 560 GFAGVFPEHKYEIVKRLQSRKHICGMTGDGVNDAPALKKADIGIAVDDATDAARGASDIV 619
Query: 301 LTEPGLNVIITAVLISRAIFQRMRNYMVRGID-GLSSTEFIQVL----ELNFLFTLDTVI 355
LTEPGL+VII+AVL SRAIFQRM+NY + + + +L E +F + VI
Sbjct: 620 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVMGFMLLCVFWEFDFPPFMVLVI 679
Query: 356 AILQ--TAFTSKKD 367
AIL T T KD
Sbjct: 680 AILNDGTIMTISKD 693
|
|
| TAIR|locus:2020372 AHA10 "autoinhibited H(+)-ATPase isoform 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1181 (420.8 bits), Expect = 1.5e-127, Sum P(2) = 1.5e-127
Identities = 240/374 (64%), Positives = 282/374 (75%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIV 60
MAGMDVLCCDKTGTLTLN LTVDKNLIE+F +D DT++L+A RAS++EN D IDAAIV
Sbjct: 328 MAGMDVLCCDKTGTLTLNSLTVDKNLIEVFVDYMDKDTILLLAGRASRLENQDAIDAAIV 387
Query: 61 GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKI 120
MLADP+EARA+I+E+HFLPF+P KRTA+TYIDS+GK +R TKG+PEQ+LNL K++I
Sbjct: 388 SMLADPREARANIREIHFLPFNPVDKRTAITYIDSDGKWYRATKGAPEQVLNLCQQKNEI 447
Query: 121 GRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRR 180
++V A+I++FAE+GLRSLAVAYQE+PE S S G PW+F GL+PLFDPP HDS ETI R
Sbjct: 448 AQRVYAIIDRFAEKGLRSLAVAYQEIPEKSNNSPGGPWRFCGLLPLFDPPRHDSGETILR 507
Query: 181 ALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240
ALSLG+ VKMITGDQLAIAKETGRRLGMGTNMYPSS+L G + DE A+PVDELIE AD
Sbjct: 508 ALSLGVCVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGHNNDEH-EAIPVDELIEMAD 566
Query: 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXXXXXXXV 300
GFAGVFPEHKYEIVK LQ H+ GM G+GVNDAPALKK V
Sbjct: 567 GFAGVFPEHKYEIVKILQEMKHVVGMTGDGVNDAPALKKADIGIAVADATDAARSSADIV 626
Query: 301 LTEPGLNVIITAVLISRAIFQRMRNYMVRGID-----GLSSTEFIQVLELNFLFTLDTVI 355
LT+PGL+VII+AVL SRAIFQRMRNY V + L T + E +F + +I
Sbjct: 627 LTDPGLSVIISAVLTSRAIFQRMRNYTVYAVSITIRIVLGFTLLALIWEYDFPPFMVLII 686
Query: 356 AILQ--TAFTSKKD 367
AIL T T KD
Sbjct: 687 AILNDGTIMTISKD 700
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9SU58 | PMA4_ARATH | 3, ., 6, ., 3, ., 6 | 0.8429 | 0.7355 | 0.3447 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| gw1.XII.988.1 | autoinhibited H+ ATPase (966 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| grail3.0023015401 | SubName- Full=Putative uncharacterized protein; (216 aa) | • | 0.899 | ||||||||
| fgenesh4_pm.C_LG_II000842 | inorganic pyrophosphatase (EC-3.6.1.1) (215 aa) | • | 0.899 | ||||||||
| fgenesh4_pg.C_LG_VII001101 | SubName- Full=Putative uncharacterized protein; (213 aa) | • | 0.899 | ||||||||
| eugene3.00090843 | inorganic pyrophosphatase (EC-3.6.1.1) (298 aa) | • | 0.899 | ||||||||
| estExt_fgenesh4_pm.C_LG_XIV0223 | SubName- Full=Putative uncharacterized protein; (216 aa) | • | 0.899 | ||||||||
| estExt_fgenesh4_pg.C_LG_XIII0040 | vacuolar H+-translocating inorganic pyrophosphatase (EC-3.6.1.1) (757 aa) | • | 0.899 | ||||||||
| estExt_fgenesh4_pg.C_1520062 | SubName- Full=Putative uncharacterized protein; (768 aa) | • | 0.899 | ||||||||
| estExt_fgenesh4_pg.C_1330100 | vacuolar H+-translocating inorganic pyrophosphatase (EC-3.6.1.1) (757 aa) | • | 0.899 | ||||||||
| estExt_Genewise1_v1.C_LG_X3050 | vacuolar H+-translocating inorganic pyrophosphatase (636 aa) | • | 0.899 | ||||||||
| estExt_Genewise1_v1.C_LG_I4261 | SubName- Full=Putative uncharacterized protein; (296 aa) | • | 0.899 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 450 | |||
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 1e-165 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 4e-79 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 2e-62 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 4e-40 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 5e-40 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 2e-38 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 9e-35 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 1e-33 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 7e-33 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 1e-32 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 1e-29 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 2e-27 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 6e-26 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 3e-23 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 4e-21 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 4e-21 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 1e-20 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 6e-20 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 6e-19 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 9e-16 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 3e-13 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 1e-10 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 5e-09 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 7e-07 | |
| PRK01158 | 230 | PRK01158, PRK01158, phosphoglycolate phosphatase; | 2e-04 | |
| TIGR00338 | 219 | TIGR00338, serB, phosphoserine phosphatase SerB | 0.001 | |
| TIGR00099 | 256 | TIGR00099, Cof-subfamily, Cof subfamily of IIB sub | 0.002 | |
| pfam08282 | 254 | pfam08282, Hydrolase_3, haloacid dehalogenase-like | 0.003 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 482 bits (1244), Expect = e-165
Identities = 197/364 (54%), Positives = 246/364 (67%), Gaps = 17/364 (4%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIV 60
+AGMD+LC DKTGTLTLNKL++D+ L F G D D V+L AA AS+ E+ D ID A++
Sbjct: 283 LAGMDILCSDKTGTLTLNKLSIDEILP--FFNGFDKDDVLLYAALASREEDQDAIDTAVL 340
Query: 61 GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSE-GKMHRVTKGSPEQILNLLHNKSK 119
G D KEAR + + F+PFDP KRT T D E GK +VTKG+P+ IL+L NK +
Sbjct: 341 GSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKE 400
Query: 120 IGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIR 179
I KV +++ A RG R+L VA W F+GL+PLFDPP HD+ ETI
Sbjct: 401 IEEKVEEKVDELASRGYRALGVART--------DEEGRWHFLGLLPLFDPPRHDTKETIE 452
Query: 180 RALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKA 239
RA LG+ VKM+TGD LAIAKET RRLG+GTN+Y + L D + + + E++E A
Sbjct: 453 RARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDL-PSGLGEMVEDA 511
Query: 240 DGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADI 299
DGFA VFPEHKYEIV+ LQ R H+ GM G+GVNDAPALKKAD+GIAVA ATDAARSAADI
Sbjct: 512 DGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDAARSAADI 571
Query: 300 VLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDG---LSSTEFIQVLELNFLFTLDTV-- 354
VLTEPGL+VI+ A+L SR IFQRM++Y++ I + + +L LNF F V
Sbjct: 572 VLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNFYFPPIMVVI 631
Query: 355 IAIL 358
IAIL
Sbjct: 632 IAIL 635
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 263 bits (673), Expect = 4e-79
Identities = 126/385 (32%), Positives = 176/385 (45%), Gaps = 54/385 (14%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADT-----------VVLMAARASQV 49
+ +DV+C DKTGTLT NK+TV K I I GG D D +L AA + V
Sbjct: 345 LGSVDVICSDKTGTLTQNKMTVKK--IYINGGGKDIDDKDLKDSPALLRFLLAAALCNSV 402
Query: 50 E--------NLDVIDAAIV------GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDS 95
D + A+V G D + + +PFD KR ++
Sbjct: 403 TPEKNGWYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTD 462
Query: 96 EGKMHRVTKGSPEQILN-------LLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPE 148
EGK KG+PE IL L + R + + + A GLR LAVAY+++
Sbjct: 463 EGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDR 522
Query: 149 GSKESS----GSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGR 204
K+ S F+GL + DPP D E I G+ V MITGD + A +
Sbjct: 523 AEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAK 582
Query: 205 RLGMGTNMYPSSALSGQD-----RDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQA 259
G+ + + G + +E + EL+E+ FA V PE K IV+ LQ
Sbjct: 583 ECGIEAEAESALVIDGAELDALSDEE------LAELVEELSVFARVSPEQKARIVEALQK 636
Query: 260 RNHICGMIGNGVNDAPALKKADIGIAVAD-ATDAARSAADIVLTEPGLNVIITAVLISRA 318
H+ M G+GVNDAPALK AD+GIA+ TDAA+ AADIVL + I+ AV+ R
Sbjct: 637 SGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRR 696
Query: 319 IFQRMRNYMVRGIDGLSSTEFIQVL 343
++ ++ + I L S +VL
Sbjct: 697 VYVNIKKF----ILYLLSKNVGEVL 717
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 211 bits (539), Expect = 2e-62
Identities = 103/326 (31%), Positives = 151/326 (46%), Gaps = 58/326 (17%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIV 60
+ +D LC DKTGTLT NK+T+ + I G D + ++ D ++ A++
Sbjct: 237 LGKVDYLCSDKTGTLTKNKMTLQG--VYIDGGKEDNSSSLVACDNNYLSG--DPMEKALL 292
Query: 61 ---GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNK 117
++ + + + + PF KR ++ +G KG+PE IL +N
Sbjct: 293 KSAELVGKADKGNKEYKILDVFPFSSVLKRMSVIVETPDGSDLLFVKGAPEFILERCNN- 351
Query: 118 SKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAET 177
+ A +GLR LA A +E+ + +F+GLI DP D+ ET
Sbjct: 352 ------YEEKYLELARQGLRVLAFASKELEDD--------LEFLGLITFEDPLRPDAKET 397
Query: 178 IRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIE 237
I + G+ V MITGD + AK + LG+
Sbjct: 398 IEELKAAGIKVVMITGDNVLTAKAIAKELGI----------------------------- 428
Query: 238 KADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAA 297
D FA V PE K +IV+ LQ + HI M G+GVNDAPALKKAD+GIA+ A++AA
Sbjct: 429 --DVFARVSPEQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAM-----GAKAAA 481
Query: 298 DIVLTEPGLNVIITAVLISRAIFQRM 323
DIVL + L+ I+ AV R IF +
Sbjct: 482 DIVLLDDDLSAIVKAVKEGRKIFSNI 507
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 153 bits (388), Expect = 4e-40
Identities = 107/346 (30%), Positives = 169/346 (48%), Gaps = 35/346 (10%)
Query: 4 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQ----VENLDVIDAAI 59
MD+LC DKTGTLT +K+ ++ + +I G ++ V+ A S ++NL +D A+
Sbjct: 371 MDILCTDKTGTLTQDKIVLENH-TDIS--GKTSERVLHSAWLNSHYQTGLKNL--LDTAV 425
Query: 60 VGMLADPKEAR--ADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNK 117
+ + + + Q++ +PFD +R ++ ++ + KG+ E+ILN+
Sbjct: 426 LEGVDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQV 485
Query: 118 SKIG----------RKVNAVINKFAERGLRSLAVAYQEVPEGSKESS---GSPWQFIGLI 164
G R++ V + +GLR +AVA + +P + S G I
Sbjct: 486 RHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYI 545
Query: 165 PLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRD 224
DPP +A ++ + G+ VK++TGD +A + +G+ L G D
Sbjct: 546 AFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAG----EVLIGSD-- 599
Query: 225 ESIVALPVDEL---IEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKAD 281
I L DEL E+ FA + P HK IV L+ H+ G +G+G+NDAPAL+ AD
Sbjct: 600 --IETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAAD 657
Query: 282 IGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYM 327
IGI+V A D AR AADI+L E L V+ V+ R F M Y+
Sbjct: 658 IGISVDGAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYI 703
|
Length = 902 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 153 bits (387), Expect = 5e-40
Identities = 110/376 (29%), Positives = 164/376 (43%), Gaps = 69/376 (18%)
Query: 5 DVLCCDKTGTLTLNKLTVDK--------NLIEIFA----GGVDADTVVLMAARASQVENL 52
+V+C DKTGTLT N +TV K ++ + G V D VL V +
Sbjct: 325 NVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRI 384
Query: 53 ---------------------DVIDAAIVGMLA-----DPKEARADIQEVHFLPFDPTGK 86
+ D A++ +L D +E + EV PF K
Sbjct: 385 LEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEV---PFSSERK 441
Query: 87 --RTALTYIDSEGKMHRVTKGSPEQILNLLHNKSK-----------IGRKVNAVINKFAE 133
+ +M + KG+ EQ+L K + + A
Sbjct: 442 WMAVKCVHRQDRSEMCFM-KGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMAS 500
Query: 134 RGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITG 193
GLR +A A PE + + F+GL+ + DPP E + ++ G+ + MITG
Sbjct: 501 AGLRVIAFASG--PEKGQLT------FLGLVGINDPPRPGVKEAVTTLITGGVRIIMITG 552
Query: 194 DQLAIAKETGRRLGMGTNMYPSSALSGQDRDE-SIVALPVDELIEKADGFAGVFPEHKYE 252
D A RRLGM S ++SG+ D L +++ K FA PEHK +
Sbjct: 553 DSQETAVSIARRLGMP--SKTSQSVSGEKLDAMDDQQL--SQIVPKVAVFARASPEHKMK 608
Query: 253 IVKHLQARNHICGMIGNGVNDAPALKKADIGIAVAD-ATDAARSAADIVLTEPGLNVIIT 311
IVK LQ R + M G+GVNDAPALK ADIG+A+ TD A+ AAD++LT+ I++
Sbjct: 609 IVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILS 668
Query: 312 AVLISRAIFQRMRNYM 327
A+ + IF ++N++
Sbjct: 669 AIEEGKGIFNNIKNFI 684
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 148 bits (374), Expect = 2e-38
Identities = 98/344 (28%), Positives = 167/344 (48%), Gaps = 31/344 (9%)
Query: 4 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMA--ARASQVENLDVIDAAIVG 61
MD+LC DKTGTLT +K+ ++K+ I + G ++ V+ MA Q +V+D A++
Sbjct: 336 MDILCTDKTGTLTQDKIELEKH---IDSSGETSERVLKMAWLNSYFQTGWKNVLDHAVLA 392
Query: 62 MLAD--PKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSK 119
L + ++ + ++V +PFD +R ++ + + KG+ E++L + +K
Sbjct: 393 KLDESAARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRF 452
Query: 120 IG----------RKVNAVINKFAERGLRSLAVAYQEVPEGSKESS---GSPWQFIGLIPL 166
G ++ + + +G+R +AVA + + G + + G +
Sbjct: 453 GGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGF 512
Query: 167 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDES 226
DPP + E I G+ VK++TGD + + +G+ N L G D
Sbjct: 513 LDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAN----DFLLGAD---- 564
Query: 227 IVALPVDEL---IEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 283
I L +EL + K FA + P K I+ L+ H G +G+G+NDAPAL+KAD+G
Sbjct: 565 IEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVG 624
Query: 284 IAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYM 327
I+V A D A+ A+DI+L E L V+ V+ R F + Y+
Sbjct: 625 ISVDTAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYL 668
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 137 bits (346), Expect = 9e-35
Identities = 85/261 (32%), Positives = 127/261 (48%), Gaps = 46/261 (17%)
Query: 104 KGSPEQIL---NLLHNK--------SKIGRKVNAVINKFAER-GLRSLAVAYQEVPEGSK 151
KG+PE +L + N K+ + +VI + LR LA+A++++P+ +
Sbjct: 450 KGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPRE 509
Query: 152 ESSG----------SPWQFIGLIPLFDPP---IHDSAETIRRALSLGLGVKMITGDQLAI 198
E S FIG++ + DPP + D+ E R A G+ V MITGD
Sbjct: 510 EDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTA---GIRVIMITGDNKET 566
Query: 199 AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADG--------FAGVFPEHK 250
A+ RR+G+ P ++ + S DE+ F+ V P HK
Sbjct: 567 AEAICRRIGI---FSPDEDVTFK----SFTGREFDEMGPAKQRAACRSAVLFSRVEPSHK 619
Query: 251 YEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVII 310
E+V+ LQ + I M G+GVNDAPALKKADIGIA+ T+ A+ A+D+VL + I+
Sbjct: 620 SELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIV 679
Query: 311 TAVLISRAIFQRMRN---YMV 328
AV RAI+ M+ YM+
Sbjct: 680 AAVEEGRAIYNNMKQFIRYMI 700
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 133 bits (338), Expect = 1e-33
Identities = 89/324 (27%), Positives = 135/324 (41%), Gaps = 63/324 (19%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIV 60
+A +D + DKTGTLT K V ++ A D D ++ +AA Q + AIV
Sbjct: 402 LAKVDTVVFDKTGTLTEGKPEV----TDVVALDGDEDELLALAAALEQHSE-HPLAKAIV 456
Query: 61 GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKI 120
A+ + E G+ +++E RV G+ LL +
Sbjct: 457 KAAAERGLPDVEDFEEI------PGRG-----VEAEVDGERVLVGNAR----LLGEEGID 501
Query: 121 GRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRR 180
++ I G + VA + +G+I L D D+ E I
Sbjct: 502 LPLLSERIEALESEGKTVVFVAVDG-------------KLVGVIALADELRPDAKEAIAA 548
Query: 181 ALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240
+LG+ V M+TGD A+ + LG +DE+
Sbjct: 549 LKALGIKVVMLTGDNRRTAEAIAKELG------------------------IDEV----- 579
Query: 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 300
A + PE K EIV+ LQA M+G+G+NDAPAL AD+GIA+ TD A AAD+V
Sbjct: 580 -RAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVV 638
Query: 301 LTEPGLNVIITAVLISRAIFQRMR 324
L L+ + A+ +SRA + ++
Sbjct: 639 LMRDDLSAVPEAIDLSRATRRIIK 662
|
Length = 713 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 131 bits (332), Expect = 7e-33
Identities = 101/341 (29%), Positives = 163/341 (47%), Gaps = 37/341 (10%)
Query: 4 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMA----ARASQVENLDVIDAAI 59
MDVLC DKTGTLT +++ ++ +L G + V+ +A S ++NL +D A+
Sbjct: 369 MDVLCTDKTGTLTQDRIILEHHLD---VSGRKDERVLQLAWLNSFHQSGMKNL--MDQAV 423
Query: 60 V--GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNK 117
V A ++V LPFD +R ++ D++G+ + KG+ E++L + +
Sbjct: 424 VAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHV 483
Query: 118 SKIG----------RKVNAVINKFAERGLRSLAVAYQEVPEGSKE---SSGSPWQFI--G 162
++ A+ + G R L VA +E+P G S+ + G
Sbjct: 484 RDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRG 543
Query: 163 LIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQD 222
+ DPP +A I G+ VK++TGD + + R +G+ P L G +
Sbjct: 544 FLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLE----PGEPLLGTE 599
Query: 223 RDESIVALPVDEL---IEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKK 279
I A+ L +E+ FA + P K ++K LQA H G +G+G+NDAPAL+
Sbjct: 600 ----IEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRD 655
Query: 280 ADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIF 320
AD+GI+V D A+ +ADI+L E L V+ V+ R F
Sbjct: 656 ADVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETF 696
|
Length = 903 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 129 bits (327), Expect = 1e-32
Identities = 82/330 (24%), Positives = 133/330 (40%), Gaps = 68/330 (20%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIV 60
+A + + DKTGTLT K TV IE ++ +L A A + + + AIV
Sbjct: 243 LAKVKTVVFDKTGTLTTGKPTVVD--IEPLDDASISEEELLALAAALEQSSSHPLARAIV 300
Query: 61 GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQIL----NLLHN 116
A + + + + + +G T E++ L
Sbjct: 301 --------RYAKKRGLELPK------QEDVEEVPGKGV--EATVDGGEEVRIGNPRFLEL 344
Query: 117 KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAE 176
+ ++N+ +G + VA + +G+I L D ++ E
Sbjct: 345 AIEPISASPDLLNEGESQGKTVVFVAVDG-------------ELLGVIALRDQLRPEAKE 391
Query: 177 TIRRAL--SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 234
I AL + G+ + M+TGD + A+ LG +DE
Sbjct: 392 AIA-ALKRAGGIKLVMLTGDNRSAAEAVAAELG------------------------IDE 426
Query: 235 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAAR 294
+ A + PE K IVK LQ + M+G+G+NDAPAL AD+GIA+ +D A
Sbjct: 427 V------HAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAI 480
Query: 295 SAADIVLTEPGLNVIITAVLISRAIFQRMR 324
AADIVL L+ + TA+ +SR + ++
Sbjct: 481 EAADIVLLNDDLSSLPTAIDLSRKTRRIIK 510
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 120 bits (304), Expect = 1e-29
Identities = 83/320 (25%), Positives = 128/320 (40%), Gaps = 65/320 (20%)
Query: 5 DVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLA 64
D + DKTGTLT K TV + +F + + L AA + E+ + AIV
Sbjct: 285 DTVVFDKTGTLTQGKPTV--TDVHVFGESDRDELLALAAALEAGSEH--PLAKAIVSYAK 340
Query: 65 DPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKV 124
+ + + +P G T EG ++ G+ + L N K +V
Sbjct: 341 AKGITLSQVSDFKAIP----GIGVEGTV---EGHTIQL--GNEKL---LGENGLKTDGEV 388
Query: 125 NAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSL 184
L E+ G++ L D ++ E I+
Sbjct: 389 EEGGGT-----TSVLVAVNGEL--------------AGVLALADQLKPEAKEVIQALKRR 429
Query: 185 GLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 244
G+ M+TGD AK + LG IE + A
Sbjct: 430 GIEPVMLTGDNRKTAKAVAKELG----------------------------IE--NVRAE 459
Query: 245 VFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEP 304
V P+ K ++K LQ + + M+G+G+NDAPAL +AD+GIA+ TD A AAD+VL
Sbjct: 460 VLPDDKAALIKKLQEKGKVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLLRN 519
Query: 305 GLNVIITAVLISRAIFQRMR 324
LN + TA+ +SR +R++
Sbjct: 520 DLNDVATAIDLSRKTLRRIK 539
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 115 bits (289), Expect = 2e-27
Identities = 96/377 (25%), Positives = 158/377 (41%), Gaps = 63/377 (16%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLI-EIFAGGVDADTVVLMAARASQVENLDV----- 54
M +C DKTGTLT N ++V + I E D V R VE + +
Sbjct: 375 MGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSE 434
Query: 55 ---------------IDAAIVGM----LADPKEARADIQEVHFLPFDPTGKRTALTYIDS 95
+ A++ L D +E RA+ + V PF+ K ++ S
Sbjct: 435 EVVDRGGKRAFIGSKTECALLDFGLLLLRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHS 494
Query: 96 EGKMHRVTKGSPEQILNLLHNK------SKIGRK-----VNAVINKFAERGLRSLAVAY- 143
GK KG+ E +L + + VI A LR++ +AY
Sbjct: 495 GGKYREFRKGASEIVLKPCRKRLDSNGEATPISDDDKDRCADVIEPLASDALRTICLAYR 554
Query: 144 ----QEVPEGSKESSGSPWQFIGLIPLFDP---PIHDSAETIRRALSLGLGVKMITGDQL 196
+E P + G IG++ + DP + ++ + +RA G+ V+M+TGD +
Sbjct: 555 DFAPEEFPRKDYPNKG--LTLIGVVGIKDPLRPGVREAVQECQRA---GITVRMVTGDNI 609
Query: 197 AIAKETGRRLGMGTNMYPSSALSGQD-----RDESIVALPVDELIEKADGFAGVFPEHKY 251
AK R G+ T + A+ G++ +E LP K A P K
Sbjct: 610 DTAKAIARNCGILT--FGGLAMEGKEFRSLVYEEMDPILP------KLRVLARSSPLDKQ 661
Query: 252 EIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADA-TDAARSAADIVLTEPGLNVII 310
+V L+ + + G+G NDAPALK AD+G ++ + T+ A+ A+DI+L + I+
Sbjct: 662 LLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIV 721
Query: 311 TAVLISRAIFQRMRNYM 327
AV R ++ +R ++
Sbjct: 722 RAVKWGRNVYDNIRKFL 738
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 111 bits (278), Expect = 6e-26
Identities = 81/303 (26%), Positives = 142/303 (46%), Gaps = 43/303 (14%)
Query: 65 DPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRV-TKGSPEQILNLLHN-KSKIGR 122
+ K A + + PFD KR A Y D+ G+ + + KG+ E+I+ + K G
Sbjct: 517 NEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGV 576
Query: 123 KVN-----------AVINKFAERGLRSLAVAYQEVPEG------------SKESSGSPWQ 159
K++ A + A GLR LA A + + ++ ++ S +
Sbjct: 577 KISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLE 636
Query: 160 FIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLG-MGTNMYPSS-- 216
F+GLI ++DPP ++SA + + G+ V M+TGD AK + +G + N
Sbjct: 637 FLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDE 696
Query: 217 -----ALSGQD----RDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMI 267
++G DE + L L+ A P+ K ++++ L R C M
Sbjct: 697 IMDSMVMTGSQFDALSDEEVDDLKALCLV-----IARCAPQTKVKMIEALHRRKAFCAMT 751
Query: 268 GNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNY 326
G+GVND+P+LK A++GIA+ + +D A+ A+DIVL++ I+ A+ R +F + +
Sbjct: 752 GDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKF 811
Query: 327 MVR 329
++
Sbjct: 812 VLH 814
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 3e-23
Identities = 108/417 (25%), Positives = 168/417 (40%), Gaps = 113/417 (27%)
Query: 6 VLCCDKTGTLTLNKLTV-----DKNLIEIFAGGVDADT---------------------V 39
+C DKTGTLT N++TV D + E ADT +
Sbjct: 346 TICSDKTGTLTQNRMTVAHMWFDNQIHE-------ADTTEDQSGVSFDKSSATWLALSRI 398
Query: 40 VLMAARA---SQVENLDVIDAAIVG-------------MLADPKEARADIQEVHFLPFDP 83
+ RA + EN+ ++ A+ G L E R +V +PF+
Sbjct: 399 AGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNS 458
Query: 84 TGKR--TALTYIDSEGKMH-RVTKGSPEQILN-----LLHNKSK-IGRKVNAVINK---- 130
T K + D H V KG+PE+IL L+H K + + ++
Sbjct: 459 TNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLE 518
Query: 131 ---FAER--GLRSLAVAYQEVPEGSK---ESSGSPWQ---FIGLIPLFDPPIHDSAETIR 179
ER G L + ++ PEG + + P F+GLI + DPP + +
Sbjct: 519 LGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVG 578
Query: 180 RALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVA---LPVDELI 236
+ S G+ V M+TGD AK + +G+ + G + E I A +PV ++
Sbjct: 579 KCRSAGIKVIMVTGDHPITAKAIAKGVGIIS--------EGNETVEDIAARLNIPVSQVN 630
Query: 237 EKADG----------------------------FAGVFPEHKYEIVKHLQARNHICGMIG 268
+ FA P+ K IV+ Q + I + G
Sbjct: 631 PRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTG 690
Query: 269 NGVNDAPALKKADIGIAVADA-TDAARSAADIVLTEPGLNVIITAVLISRAIFQRMR 324
+GVND+PALKKADIG+A+ A +D ++ AAD++L + I+T V R IF ++
Sbjct: 691 DGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLK 747
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 95.9 bits (239), Expect = 4e-21
Identities = 58/175 (33%), Positives = 87/175 (49%), Gaps = 36/175 (20%)
Query: 159 QFIGLIPLFDPPIHDSAETIRRALSLGLG-VKMITGDQLAIAKETGRRLGMGTNMYPSSA 217
++G I L D P D+AE I +LG+ V M+TGD+ A+A+ R LG
Sbjct: 352 TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELG---------- 401
Query: 218 LSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPAL 277
+DE+ A + PE K EIVK L+ + M+G+G+NDAPAL
Sbjct: 402 --------------IDEV------HAELLPEDKLEIVKELREKYGPVAMVGDGINDAPAL 441
Query: 278 KKADIGIAV-ADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI 331
AD+GIA+ A +D A AD+VL L+ + A+ ++R R R + + +
Sbjct: 442 AAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLAR----RTRRIVKQNV 492
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 96.2 bits (240), Expect = 4e-21
Identities = 83/316 (26%), Positives = 129/316 (40%), Gaps = 87/316 (27%)
Query: 5 DVLCCDKTGTLTL-NKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDA-----A 58
D L DKTGT+TL N+ + I GV + + A AS + D +
Sbjct: 300 DTLLLDKTGTITLGNRQASEF----IPVPGVSEEELADAAQLAS------LADETPEGRS 349
Query: 59 IVGMLADPKEARADIQEVH----FLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLL 114
IV LA ++ F+PF +T ++ +D G + KG+ + I +
Sbjct: 350 IV-ELAKKLGIELREDDLQSHAEFVPFT---AQTRMSGVDLPGG-REIRKGAVDAIRRYV 404
Query: 115 H-NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFD---PP 170
I ++A +++ + G L V E + +G+I L D P
Sbjct: 405 RERGGHIPEDLDAAVDEVSRLGGTPLVVV-----ENGR--------ILGVIYLKDIVKPG 451
Query: 171 IHDSAETIRRALSLGLGVK--MITGDQ----LAIAKETGRRLGMGTNMYPSSALSGQDRD 224
I + +R+ +G+K MITGD AIA E G
Sbjct: 452 IKERFAELRK-----MGIKTVMITGDNPLTAAAIAAEAG--------------------- 485
Query: 225 ESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 284
VD+ I +A PE K +++ QA + M G+G NDAPAL +AD+G+
Sbjct: 486 -------VDDFIAEAT------PEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGV 532
Query: 285 AVADATDAARSAADIV 300
A+ T AA+ AA++V
Sbjct: 533 AMNSGTQAAKEAANMV 548
|
Length = 681 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 94.7 bits (236), Expect = 1e-20
Identities = 88/391 (22%), Positives = 145/391 (37%), Gaps = 103/391 (26%)
Query: 5 DVLCCDKTGTLTLNKLTV--------DKNLIEIF---AGGVDADTVVLMAARAS--QVEN 51
DV C DKTGTLT + L + ++ ++I + + T +A S ++E
Sbjct: 449 DVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEG 508
Query: 52 ------LDVIDAAIVG------------------MLADPKEARADIQEVHFLPFDPTGKR 87
LD G + D I + F +R
Sbjct: 509 KLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSI--IRRFQFSSALQR 566
Query: 88 TA-LTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEV 146
+ + + E KG+PE I +L + V+ + G R LA+AY+E+
Sbjct: 567 MSVIVSTNDERSPDAFVKGAPETIQSLCS-PETVPSDYQEVLKSYTREGYRVLALAYKEL 625
Query: 147 P--------EGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQL-- 196
P + S+++ S F+G I +P D+ E I+ + MITGD
Sbjct: 626 PKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLT 685
Query: 197 --AIAKETG-----RRLGMGTNMYPSSALS------------------------GQDRDE 225
+A+E G L + P S GQD E
Sbjct: 686 AVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVE 745
Query: 226 SIVALP--------------------VDELIEKADGFAGVFPEHKYEIVKHLQARNHICG 265
++A + L+ FA + P+ K +V+ LQ ++ G
Sbjct: 746 DLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVG 805
Query: 266 MIGNGVNDAPALKKADIGIAVADATDAARSA 296
M G+G ND ALK+AD+GI++++A +A+ +A
Sbjct: 806 MCGDGANDCGALKQADVGISLSEA-EASVAA 835
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 92.2 bits (230), Expect = 6e-20
Identities = 83/326 (25%), Positives = 132/326 (40%), Gaps = 108/326 (33%)
Query: 5 DVLCCDKTGTLTL-NKLTVDKNLIEIF--AGGVDADTVVLMAARASQVENLDVIDAAIVG 61
D L DKTGT+TL N+ + F GV + ++ DAA +
Sbjct: 299 DTLLLDKTGTITLGNRQASE------FLPVPGVTEE---------------ELADAAQLS 337
Query: 62 MLADP-----------------KEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTK 104
LAD +E F+PF +T ++ +D +G + K
Sbjct: 338 SLADETPEGRSIVVLAKQRFNLRERDLQSLHATFVPFS---AQTRMSGVDLDG--REIRK 392
Query: 105 GSPEQILNLLH-NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGL 163
G+ + I + N +++A +++ A +G L VA E ++ +G+
Sbjct: 393 GAVDAIRRYVESNGGHFPAELDAAVDEVARKGGTPLVVA-----EDNR--------VLGV 439
Query: 164 IPLFD---PPIHDSAETIRRALSLGLGVK--MITGD-QL---AIAKETGRRLGMGTNMYP 214
I L D P I + +R+ +G+K MITGD L AIA E G
Sbjct: 440 IYLKDIVKPGIKERFAELRK-----MGIKTVMITGDNPLTAAAIAAEAG----------- 483
Query: 215 SSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDA 274
VD+ + +A PE K +++ QA + M G+G NDA
Sbjct: 484 -----------------VDDFLAEAT------PEDKLALIRQEQAEGRLVAMTGDGTNDA 520
Query: 275 PALKKADIGIAVADATDAARSAADIV 300
PAL +AD+G+A+ T AA+ A ++V
Sbjct: 521 PALAQADVGVAMNSGTQAAKEAGNMV 546
|
Length = 679 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 89.4 bits (222), Expect = 6e-19
Identities = 89/327 (27%), Positives = 134/327 (40%), Gaps = 74/327 (22%)
Query: 4 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGML 63
+D L DKTGTLT K V ++ F GVD + +AA Q + +
Sbjct: 517 LDTLVFDKTGTLTEGKPQVVA--VKTF-NGVDEAQALRLAAALEQGSSHPL--------- 564
Query: 64 ADPKEARADIQEVHFLPF-DPTGKRT-ALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIG 121
ARA + + + G RT + E + H + G+ LL+ +
Sbjct: 565 -----ARAILDKAGDMTLPQVNGFRTLRGLGVSGEAEGHALLLGNQ----ALLNEQQVDT 615
Query: 122 RKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRA 181
+ + A I A +G + +A + L+ + DP DS ++R
Sbjct: 616 KALEAEITAQASQGATPVLLAVDG-------------KAAALLAIRDPLRSDSVAALQRL 662
Query: 182 LSLGLGVKMITGDQL----AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIE 237
G + M+TGD AIAKE G +DE+I
Sbjct: 663 HKAGYRLVMLTGDNPTTANAIAKEAG----------------------------IDEVI- 693
Query: 238 KADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAA 297
AGV P+ K E +K LQ++ M+G+G+NDAPAL +AD+GIA+ +D A A
Sbjct: 694 -----AGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETA 748
Query: 298 DIVLTEPGLNVIITAVLISRAIFQRMR 324
I L L + A+ ISRA + M+
Sbjct: 749 AITLMRHSLMGVADALAISRATLRNMK 775
|
Length = 834 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 79.5 bits (196), Expect = 9e-16
Identities = 83/306 (27%), Positives = 130/306 (42%), Gaps = 66/306 (21%)
Query: 4 MDVLCCDKTGTLTL-NKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGM 62
+D L DKTGT+TL N+L + I A GVD T+ A AS + D + + +
Sbjct: 299 VDTLLLDKTGTITLGNRLASEF----IPAQGVDEKTLADAAQLASLAD--DTPEGKSIVI 352
Query: 63 LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLH-NKSKIG 121
LA R D + F +T ++ I+ + + KG+ + I + N I
Sbjct: 353 LAKQLGIREDDVQSLHATFVEFTAQTRMSGINLDNG-RMIRKGAVDAIKRHVEANGGHIP 411
Query: 122 RKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFD---PPIHDSAETI 178
++ +++ A +G L V E ++ G+I L D I + +
Sbjct: 412 TDLDQAVDQVARQGGTPLVVC-----EDNR--------IYGVIYLKDIVKGGIKERFAQL 458
Query: 179 RRALSLGLGVKMITGDQ----LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 234
R+ +G+ MITGD AIA E G VD+
Sbjct: 459 RK---MGIKTIMITGDNRLTAAAIAAEAG----------------------------VDD 487
Query: 235 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAAR 294
I +A PE K +++ QA + M G+G NDAPAL +AD+G+A+ T AA+
Sbjct: 488 FIAEAT------PEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAK 541
Query: 295 SAADIV 300
AA++V
Sbjct: 542 EAANMV 547
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 71.6 bits (176), Expect = 3e-13
Identities = 49/160 (30%), Positives = 67/160 (41%), Gaps = 32/160 (20%)
Query: 159 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL 218
+GLI L D D+ + I +LG+ M+TGD A LG+
Sbjct: 558 DVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGI---------- 607
Query: 219 SGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALK 278
D AG+ PE K + V L + M+G+G+NDAPA+K
Sbjct: 608 ---------------------DFRAGLLPEDKVKAVTELNQHAPL-AMVGDGINDAPAMK 645
Query: 279 KADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRA 318
A IGIA+ TD A AD LT L + + +SRA
Sbjct: 646 AASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRA 685
|
Length = 741 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 63.2 bits (153), Expect = 1e-10
Identities = 72/329 (21%), Positives = 132/329 (40%), Gaps = 62/329 (18%)
Query: 4 MDVLCCDKTGTLTL-NKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGM 62
++VL DKTGT+T N++ I + + + ++ AA S + + D + +
Sbjct: 298 VNVLILDKTGTITYGNRMADA--FIPVKSSSFER---LVKAAYESSIAD-DTPEGRSIVK 351
Query: 63 LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKS-KIG 121
LA + + ++PF + + + + E V KG+P ++ + I
Sbjct: 352 LAYKQHIDLPQEVGEYIPFTAETRMSGVKFTTRE-----VYKGAPNSMVKRVKEAGGHIP 406
Query: 122 RKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRA 181
++A++ +++G L V +G+I L D E R
Sbjct: 407 VDLDALVKGVSKKGGTPLVVLEDNE-------------ILGVIYLKDVIKDGLVERFREL 453
Query: 182 LSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADG 241
+G+ M TGD A + G VD + +
Sbjct: 454 REMGIETVMCTGDNELTAATIAKEAG------------------------VDRFVAECK- 488
Query: 242 FAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVL 301
PE K +++ QA+ HI M G+G NDAPAL +A++G+A+ T +A+ AA+++
Sbjct: 489 -----PEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNSGTMSAKEAANLID 543
Query: 302 TEPGLNVIITAVLISRAIFQRMRNYMVRG 330
+ ++ VLI + + M RG
Sbjct: 544 LDSNPTKLMEVVLIGKQLL------MTRG 566
|
Length = 673 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 54.5 bits (131), Expect = 5e-09
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 222 DRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKAD 281
DR S+V L I FAG PE K +I++ L+ R M+GNG ND AL++AD
Sbjct: 54 DRKGSLVQLAEFVGIPVERVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREAD 113
Query: 282 IGIAV---ADATDAARSAADIVLTEPGLNVIITA 312
+GI + AD+VL E + +
Sbjct: 114 LGICTIQQEGVPERLLLTADVVLKEIAEILDLLK 147
|
Length = 152 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 49.2 bits (117), Expect = 7e-07
Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 19/121 (15%)
Query: 161 IGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSG 220
+GLI L DP + E ++ G+ + ++TGD A R LG+ + +S
Sbjct: 86 LGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGL-----FDALVSA 140
Query: 221 QDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKA 280
V P ++ E A ++ L + M+G+GVND PA K A
Sbjct: 141 DLYGLVGVGKPDPKIFELA--------------LEELGVKPEEVLMVGDGVNDIPAAKAA 186
Query: 281 D 281
Sbjct: 187 G 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|234910 PRK01158, PRK01158, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 2e-04
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 267 IGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEP 304
IG+ ND + A G+AVA+A + + AAD V +
Sbjct: 179 IGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKS 216
|
Length = 230 |
| >gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.001
Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 11/84 (13%)
Query: 233 DELIEKADGFAG------VFPEHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADI 282
+ L + G V +K + + L + I +G+G ND +K A +
Sbjct: 130 NRLEVEDGKLTGLVEGPIVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGL 189
Query: 283 GIAVADATDAARSAADIVLTEPGL 306
GIA +A + ADI + + L
Sbjct: 190 GIAF-NAKPKLQQKADICINKKDL 212
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219 |
| >gnl|CDD|232824 TIGR00099, Cof-subfamily, Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.002
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 266 MIGNGVNDAPALKKADIGIAVADATDAARSAADIV 300
G+G+ND L+ A G+A+ +A + ++ AD V
Sbjct: 209 AFGDGMNDIEMLEAAGYGVAMGNADEELKALADYV 243
|
This subfamily of sequences falls within the Class-IIB subfamily (TIGR01484) of the Haloacid Dehalogenase superfamily of aspartate-nucleophile hydrolases. The use of the name "Cof" as an identifier here is arbitrary and refers to the E. coli Cof protein. This subfamily is notable for the large number of recent paralogs in many species. Listeria, for instance, has 12, Clostridium, Lactococcus and Streptococcus pneumoniae have 8 each, Enterococcus and Salmonella have 7 each, and Bacillus subtilus, Mycoplasma, Staphylococcus and E. coli have 6 each. This high degree of gene duplication is limited to the gamma proteobacteria and low-GC gram positive lineages. The profusion of genes in this subfamily is not coupled with a high degree of divergence, so it is impossible to determine an accurate phylogeny at the equivalog level. Considering the relationship of this subfamily to the other known members of the HAD-IIB subfamily (TIGR01484), sucrose and trehalose phosphatases and phosphomannomutase, it seems a reasonable hypothesis that these enzymes act on phosphorylated sugars. Possibly the diversification of genes in this subfamily represents the diverse sugars and polysaccharides that various bacteria find in their biological niches. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences [Unknown function, Enzymes of unknown specificity]. Length = 256 |
| >gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 39.1 bits (92), Expect = 0.003
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 267 IGNGVNDAPALKKADIGIAVADATDAARSAADIV 300
G+G ND L+ A +G+A+ +A+ ++AAD V
Sbjct: 208 FGDGENDIEMLELAGLGVAMGNASPEVKAAADYV 241
|
This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 450 | |||
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.96 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.65 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.23 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.23 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.2 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.2 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.19 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.15 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.15 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.13 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.09 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.07 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.06 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.03 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.03 | |
| PLN02887 | 580 | hydrolase family protein | 99.03 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.02 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.93 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 98.91 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.9 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.89 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.88 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.86 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.76 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.74 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.72 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.72 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.6 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.58 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.45 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.41 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 98.36 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.35 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.33 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.32 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 98.3 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.2 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.16 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.15 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 98.1 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 98.03 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 98.01 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.0 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.99 | |
| PRK08238 | 479 | hypothetical protein; Validated | 97.89 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.87 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.84 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.8 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.79 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.75 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.66 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.66 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.64 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 97.56 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 97.56 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.52 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.51 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.5 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.41 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.41 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.38 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 97.34 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 97.34 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 97.33 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 97.26 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 97.23 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 97.22 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 97.14 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 97.1 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 97.09 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 97.05 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 97.02 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 97.01 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 96.94 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 96.93 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 96.85 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 96.85 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 96.83 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 96.83 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.8 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 96.77 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 96.77 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 96.72 | |
| PRK06769 | 173 | hypothetical protein; Validated | 96.67 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 96.6 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 96.51 | |
| PLN02580 | 384 | trehalose-phosphatase | 96.49 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 96.48 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 96.44 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 96.4 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 96.37 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 96.2 | |
| PLN02940 | 382 | riboflavin kinase | 96.2 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 96.17 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 96.09 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 96.07 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 95.96 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 95.94 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 95.89 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 95.81 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 95.7 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 95.53 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 95.52 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 95.32 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 95.24 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 95.23 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 95.2 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 94.99 | |
| PLN02811 | 220 | hydrolase | 94.97 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 94.96 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 94.93 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 94.93 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 94.82 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 94.78 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 94.68 | |
| PLN03017 | 366 | trehalose-phosphatase | 94.17 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 93.85 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 93.73 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 93.71 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 93.35 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 91.33 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 91.17 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 90.93 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 90.89 | |
| PLN02423 | 245 | phosphomannomutase | 90.84 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 90.63 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 90.52 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 90.49 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 88.09 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 87.02 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 86.67 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 86.49 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 86.18 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 85.81 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 84.24 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 83.19 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 82.61 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 82.26 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 82.0 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 81.84 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 81.07 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 80.56 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 80.46 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 80.18 |
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-94 Score=727.53 Aligned_cols=440 Identities=74% Similarity=1.096 Sum_probs=420.7
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcccEEEEec
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLP 80 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~l~~~p 80 (450)
||+||++|+|||||||.|+++|++..++++.+|+++|+++..|+++++.+|+|+||+|+++++.+|++++.+|++++|+|
T Consensus 324 mAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~ikevhF~P 403 (942)
T KOG0205|consen 324 MAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGIKEVHFLP 403 (942)
T ss_pred hhCceEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCceEEeecc
Confidence 78999999999999999999999988888999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcCChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCCcEE
Q 013069 81 FDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQF 160 (450)
Q Consensus 81 F~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~~~ 160 (450)
|||++||++.+|.+++|++++++||+|++|+++|..+.++++++++.+++|+++|+|.|+||++..|++..+..+.+|+|
T Consensus 404 FnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~ 483 (942)
T KOG0205|consen 404 FNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEF 483 (942)
T ss_pred CCccccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcc
Q 013069 161 IGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240 (450)
Q Consensus 161 lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (450)
+|++++.||||+++.++|++....|++|.|+|||....++++++++|+.+++||+..+.|.+.++.+...+.++++++++
T Consensus 484 ~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~ad 563 (942)
T KOG0205|consen 484 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKAD 563 (942)
T ss_pred ccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHHHHHH
Q 013069 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIF 320 (450)
Q Consensus 241 v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~~~ 320 (450)
.|+.++|+||+++|+.||+++|.|+|+|||+||+|+|+.||+||++.+++++|+.+||+|+++++++.|+.++..||.+|
T Consensus 564 gfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepglSviI~avltSraIf 643 (942)
T KOG0205|consen 564 GFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIF 643 (942)
T ss_pred CccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCCchhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH-------------------------------------------------------------------
Q 013069 321 QRMRNYMVRGIDG------------------------------------------------------------------- 333 (450)
Q Consensus 321 ~~i~~~~~~~~~~------------------------------------------------------------------- 333 (450)
+||++|.+|++..
T Consensus 644 qrmknytiyavsitiriv~gfml~alIw~~df~pfmvliiailnd~t~mtis~d~v~psp~pdswkl~~ifatgvVlgty 723 (942)
T KOG0205|consen 644 QRMKNYTIYAVSITIRIVFGFMLIALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGTY 723 (942)
T ss_pred HHHhhheeeeehhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCCceEEEEcccCCCCCCCcccchhhhheeeeEehhH
Confidence 9999998887721
Q ss_pred ---------------------------------HHHHHHHHHhh------------------------------------
Q 013069 334 ---------------------------------LSSTEFIQVLE------------------------------------ 344 (450)
Q Consensus 334 ---------------------------------~~~~i~l~~~~------------------------------------ 344 (450)
++.++|+++++
T Consensus 724 ma~~tvif~w~~~~t~ff~~~f~v~~~~~~~~~~~~a~ylqvsi~sqaliFvtrsr~w~~~erpg~~L~~af~~aqliat 803 (942)
T KOG0205|consen 724 MAIMTVIFFWAAYTTDFFPRTFGVRSLFGNEHELMSALYLQVSIISQALIFVTRSRSWSFVERPGWLLLIAFFAAQLIAT 803 (942)
T ss_pred HHHHHHHHhhhhccccccccccceeeccCCHHHHHHhhhhhheehhceeeEEEeccCCccccCcHHHHHHHHHHHHHHHH
Confidence 44455555554
Q ss_pred ----------------------------hcccccHHHHHHH---------------HHhccCcccccchhHHHHHHHHhh
Q 013069 345 ----------------------------LNFLFTLDTVIAI---------------LQTAFTSKKDFGKEERELLWAHAQ 381 (450)
Q Consensus 345 ----------------------------~~~~~pl~~~~~l---------------~~~~~~~~~~~~~~~~~~~~~~~~ 381 (450)
+.+++|++.+.+. .+++|+.+++||.+.++.+|+..|
T Consensus 804 liavya~w~~a~i~~igw~w~gviw~ysi~~y~~ld~~kf~~~y~lsg~a~~~~~~~k~~~~~kk~~~~~~~~a~~~~~q 883 (942)
T KOG0205|consen 804 LIAVYANWSFARITGIGWGWAGVIWLYSIVFYIPLDILKFIIRYALSGKAWDRLIENKTAFTTKKDYGKEEREAQWALAQ 883 (942)
T ss_pred HHHHHheecccceecceeeeeeeEEEEEEEEEEechhhheehhhhhhhhHHHHHhcCcchhhhccccchhhhhhHHHHhh
Confidence 4577888888885 456788999999999999999999
Q ss_pred hhhhcCCCCCCccccccccccccchhHHHHHhhhhHHhhhhhhcccchhhhhhhccCCChhhhhccccC
Q 013069 382 RTLHGLQPPDTSMFSVRSSYGELSWMAEEARRRAEIARLRELHTLKGHVESLIRLKGLDIDAIQQSYSV 450 (450)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (450)
|++||+++++ -+++|+++++++||+|++|+|++|+|+||+|+++|+||+|+++| |||||
T Consensus 884 rt~~~lq~~~---------~~~~~~~a~~~~~~ae~~r~~e~~~l~g~vesv~klk~~d~~~~-~~~t~ 942 (942)
T KOG0205|consen 884 RTLHGLQPPE---------GRELSEIAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETI-QHYTV 942 (942)
T ss_pred hhhcccCCCc---------cchhhHHHHHHhhhhhhhhccchhhhhhhhHhhhhhcccchhhh-hhccC
Confidence 9999999994 17999999999999999999999999999999999999999999 99997
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-70 Score=606.26 Aligned_cols=393 Identities=31% Similarity=0.446 Sum_probs=316.5
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCC---------hHHHHHHHHHhcccC--------CCChHHHHHHHhh
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVD---------ADTVVLMAARASQVE--------NLDVIDAAIVGML 63 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~---------~~~il~~aa~~~~~~--------~~~pi~~ai~~~~ 63 (450)
||++|+||||||||||+|+|+|.++++.....+.+ ...++..++.|+... ..||.|.||+.++
T Consensus 345 LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~~gdptE~Al~~~a 424 (917)
T COG0474 345 LGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFA 424 (917)
T ss_pred ccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCceecCCccHHHHHHHH
Confidence 79999999999999999999999988752011122 112455555555222 3589999999988
Q ss_pred cCc------hhhhhcccEEEEeccCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcC-------ChhhHHHHHHHHHH
Q 013069 64 ADP------KEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN-------KSKIGRKVNAVINK 130 (450)
Q Consensus 64 ~~~------~~~~~~~~~l~~~pF~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~-------~~~~~~~~~~~~~~ 130 (450)
.+. ...+..+++++.+||+|.+|||++++++.+|+++.++|||||.|+++|.. .++.++.+.+..++
T Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (917)
T COG0474 425 EKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKE 504 (917)
T ss_pred HhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHH
Confidence 643 23345567799999999999999999977777999999999999999873 45677889999999
Q ss_pred HHHhcchhhhhhceecCCCCc----CCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHh
Q 013069 131 FAERGLRSLAVAYQEVPEGSK----ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL 206 (450)
Q Consensus 131 ~a~~Glr~l~vA~~~~~~~~~----~~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~l 206 (450)
|+++|+|++++||+.++..+. +..|+++.|+|+++++||||++++++|+.|+++||++||+||||..||.+||++|
T Consensus 505 la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~ 584 (917)
T COG0474 505 LASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKEC 584 (917)
T ss_pred HHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHc
Confidence 999999999999998876544 5789999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEe
Q 013069 207 GMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 286 (450)
Q Consensus 207 gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~ 286 (450)
|+..+.....+++|.+.+...+. ++.+.+++..+|||++|+||.++|+.||+.|++|+|+|||+||+||||+|||||||
T Consensus 585 Gi~~~~~~~~vi~G~el~~l~~~-el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIam 663 (917)
T COG0474 585 GIEAEAESALVIDGAELDALSDE-ELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAM 663 (917)
T ss_pred CCCCCCCceeEeehHHhhhcCHH-HHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEe
Confidence 98765444446777766543333 66778888899999999999999999999999999999999999999999999999
Q ss_pred c-cchHHHhhccCEEecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhc--ccccHHHHHHH-HHhc
Q 013069 287 A-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFI-QVLELN--FLFTLDTVIAI-LQTA 361 (450)
Q Consensus 287 ~-~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~~~~~i~~~~~~~~~~~~~~i~l-~~~~~~--~~~pl~~~~~l-~~~~ 361 (450)
+ +|+++++++||++++++++..|..+|.+||++|+|+++++.|.+..+...++. .+..++ .++|+.+++++ .++.
T Consensus 664 g~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p~~~~qll~inll 743 (917)
T COG0474 664 GGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLL 743 (917)
T ss_pred cccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHH
Confidence 8 69999999999999999999999999999999999999999998865553333 333333 34799999998 4445
Q ss_pred cCcccccchhHHHHHHHHhhhhhhcCCCCCCccccc
Q 013069 362 FTSKKDFGKEERELLWAHAQRTLHGLQPPDTSMFSV 397 (450)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (450)
+...+.+..+.....|....+. .+.|.+.+|+.
T Consensus 744 ~d~~pa~~L~~~~~~~~~m~~~---~~~p~~~i~~~ 776 (917)
T COG0474 744 TDSLPALALGVEDPESDVMKRP---PRGPEEGLFNR 776 (917)
T ss_pred HhhhhhheeecCCCcccccccC---CCCccccccch
Confidence 5555444433332233333332 44555556643
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-64 Score=551.02 Aligned_cols=348 Identities=55% Similarity=0.858 Sum_probs=295.7
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcccEEEEec
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLP 80 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~l~~~p 80 (450)
||++|+||||||||||+|+|+|.+++. ...+.+.++++.+++.++...+.||+|.|++.++.+....+..++.++.+|
T Consensus 283 lg~v~~i~~DKTGTLT~~~~~v~~~~~--~~~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~p 360 (755)
T TIGR01647 283 LAGMDILCSDKTGTLTLNKLSIDEILP--FFNGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVP 360 (755)
T ss_pred ccCCcEEEecCCCccccCceEEEEEEe--cCCCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEec
Confidence 689999999999999999999998753 222367888888888776555667999999998766544456788899999
Q ss_pred cCCCCceEEEEEEccC-CeEEEEEcCCHHHHHhhhcCChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCCcE
Q 013069 81 FDPTGKRTALTYIDSE-GKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQ 159 (450)
Q Consensus 81 F~~~~kr~svi~~~~~-g~~~~~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~~ 159 (450)
|++.+|+|++++.+.+ |+.+.++||+|+.|+++|....+.++.+++.+++++.+|+|++++||++ .|++|+
T Consensus 361 f~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~--------~e~~l~ 432 (755)
T TIGR01647 361 FDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDELASRGYRALGVARTD--------EEGRWH 432 (755)
T ss_pred cCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEc--------CCCCcE
Confidence 9999999999887653 7788899999999999998766777888899999999999999999973 257899
Q ss_pred EEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhc
Q 013069 160 FIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKA 239 (450)
Q Consensus 160 ~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 239 (450)
|+|+++++||||++++++|++|+++|++|+|+|||++.+|.++|+++||..+.+....+......+.+.+.++++.++++
T Consensus 433 ~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 512 (755)
T TIGR01647 433 FLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDA 512 (755)
T ss_pred EEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999997543322222211111233344577888899
Q ss_pred cceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHHHHH
Q 013069 240 DGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAI 319 (450)
Q Consensus 240 ~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~~ 319 (450)
++||+++|+||.++|+.||++|++|+|+|||+||+|||++|||||||+++++.|+++||+||++++|+.|+.+|++||++
T Consensus 513 ~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~ 592 (755)
T TIGR01647 513 DGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILESRKI 592 (755)
T ss_pred CEEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHhhhcccccHHHHHHHH
Q 013069 320 FQRMRNYMVRGIDGLSSTEFI-QVLELNFLFTLDTVIAIL 358 (450)
Q Consensus 320 ~~~i~~~~~~~~~~~~~~i~l-~~~~~~~~~pl~~~~~l~ 358 (450)
|+||++|+.|.+..++..++. .++.++..+|++++++|+
T Consensus 593 ~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~~~l~~~~il~ 632 (755)
T TIGR01647 593 FQRMKSYVIYRIAETIRIVFFFGLLILILNFYFPPIMVVI 632 (755)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHhCcchhHHHHHH
Confidence 999999999999865554433 333333446788888873
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-64 Score=526.83 Aligned_cols=357 Identities=29% Similarity=0.447 Sum_probs=290.7
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccC-----------CC------------------ChH---HHHHHHHHhcc
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAG-----------GV------------------DAD---TVVLMAARASQ 48 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~-----------~~------------------~~~---~il~~aa~~~~ 48 (450)
||.+++||+|||||||+|+|++.++++..... ++ +.+ +++..++.|..
T Consensus 329 LGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNd 408 (972)
T KOG0202|consen 329 LGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDLLQELAEICALCND 408 (972)
T ss_pred ccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccHHHHHHHHHHHhhhh
Confidence 78999999999999999999999987621110 01 111 33444444421
Q ss_pred -----cC------CCChHHHHHHHhhcC-----ch---h-----------hhhcccEEEEeccCCCCceEEEEEEccCCe
Q 013069 49 -----VE------NLDVIDAAIVGMLAD-----PK---E-----------ARADIQEVHFLPFDPTGKRTALTYIDSEGK 98 (450)
Q Consensus 49 -----~~------~~~pi~~ai~~~~~~-----~~---~-----------~~~~~~~l~~~pF~~~~kr~svi~~~~~g~ 98 (450)
.. ...|.+.|+...+.. .. . ..+.++.+..+||++.+|+|++.+.+..|.
T Consensus 409 a~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~ 488 (972)
T KOG0202|consen 409 ATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQ 488 (972)
T ss_pred hhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeecccccceEEEEEecCCCC
Confidence 11 235888888765431 11 0 122345568999999999999999976554
Q ss_pred --EEEEEcCCHHHHHhhhc------------CChhhHHHHHHHHHHHHHhcchhhhhhceecCCC-----------CcCC
Q 013069 99 --MHRVTKGSPEQILNLLH------------NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEG-----------SKES 153 (450)
Q Consensus 99 --~~~~~KGa~~~i~~~~~------------~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~-----------~~~~ 153 (450)
+..|.|||+|.|+++|. .++..++.+.+...+|.++|+|+|++|++..+.. .+..
T Consensus 489 ~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~~~~~l~~~s~~~~ 568 (972)
T KOG0202|consen 489 SGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVPDDQDLNDTSNRAT 568 (972)
T ss_pred ccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccChhhhhhcccccccc
Confidence 78999999999999994 1345678888999999999999999999976631 2446
Q ss_pred CCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--CCccccCCchhhhhhcCC
Q 013069 154 SGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSALSGQDRDESIVALP 231 (450)
Q Consensus 154 ~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~--~~~~l~~~~~~~~~~~~~ 231 (450)
.|.+|+|+|++++.||||++++++|+.|+++||+|+|+|||+..||++||+++|+..+.. ....++|.+.|. +...+
T Consensus 569 ~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~-ls~~~ 647 (972)
T KOG0202|consen 569 AESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDD-LSDEE 647 (972)
T ss_pred cccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhc-CCHHH
Confidence 789999999999999999999999999999999999999999999999999999976543 445667766653 44445
Q ss_pred hhHHhhhccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEec-cchHHHhhccCEEecCCCchHHH
Q 013069 232 VDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVII 310 (450)
Q Consensus 232 ~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~ 310 (450)
.++.+....+|+|++|.||.+||+.||++|.+|+|+|||+||+||||.|||||||| +|++.||+|||+||.++||+.|+
T Consensus 648 ~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIv 727 (972)
T KOG0202|consen 648 LDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIV 727 (972)
T ss_pred HHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHH
Confidence 66778888999999999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhc-ccccHHHHHHHH
Q 013069 311 TAVLISRAIFQRMRNYMVRGIDGLSSTEFI-QVLELN-FLFTLDTVIAIL 358 (450)
Q Consensus 311 ~~I~~~R~~~~~i~~~~~~~~~~~~~~i~l-~~~~~~-~~~pl~~~~~l~ 358 (450)
.+|++||.+|.||++|+.|.+..+...+.+ .++..+ .-.||.++++|+
T Consensus 728 aAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLW 777 (972)
T KOG0202|consen 728 AAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILW 777 (972)
T ss_pred HHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhhe
Confidence 999999999999999999999866555544 344444 558999999993
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-63 Score=552.64 Aligned_cols=354 Identities=28% Similarity=0.453 Sum_probs=295.2
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhccc--CCCChHHHHHHHhhcCch--hhhhcccEE
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQV--ENLDVIDAAIVGMLADPK--EARADIQEV 76 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~--~~~~pi~~ai~~~~~~~~--~~~~~~~~l 76 (450)
||++|+||||||||||+|+|+|.+.+. ..+.+.++++.+++.++.. ...||+|.|++.++.... ..+..++.+
T Consensus 366 Lg~v~vIc~DKTGTLT~~~m~V~~~~~---~~~~~~~~~l~~a~l~s~~~~~~~~p~e~All~~a~~~~~~~~~~~~~~~ 442 (903)
T PRK15122 366 FGAMDVLCTDKTGTLTQDRIILEHHLD---VSGRKDERVLQLAWLNSFHQSGMKNLMDQAVVAFAEGNPEIVKPAGYRKV 442 (903)
T ss_pred hcCCcEEEecCCcccccCeEEEEEEEc---CCCCChHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHcCchhhhhcCceE
Confidence 689999999999999999999998642 2244556777777654332 234799999998875432 123467889
Q ss_pred EEeccCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcC----------ChhhHHHHHHHHHHHHHhcchhhhhhceec
Q 013069 77 HFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN----------KSKIGRKVNAVINKFAERGLRSLAVAYQEV 146 (450)
Q Consensus 77 ~~~pF~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~----------~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~ 146 (450)
+.+||++.+|+|++++.+.+|+++.++||+|+.|+++|.. +++.++.+.+..++++.+|+|++++||+++
T Consensus 443 ~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~ 522 (903)
T PRK15122 443 DELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREI 522 (903)
T ss_pred EEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEecc
Confidence 9999999999999998877788899999999999999962 223355677888999999999999999988
Q ss_pred CCCCc-----CCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCC
Q 013069 147 PEGSK-----ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQ 221 (450)
Q Consensus 147 ~~~~~-----~~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~ 221 (450)
+.++. +..|++++|+|+++++||||++++++|++|+++||+|+|+|||++.+|.++|+++||.. ..++.|.
T Consensus 523 ~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~----~~vi~G~ 598 (903)
T PRK15122 523 PGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP----GEPLLGT 598 (903)
T ss_pred CccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC----CCccchH
Confidence 65432 23578999999999999999999999999999999999999999999999999999953 3456666
Q ss_pred chhhhhhcCChhHHhhhccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEe
Q 013069 222 DRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVL 301 (450)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl 301 (450)
+.+. +...++.+.+++.++|||++|+||.++|+.||++|++|+|+|||+||+|||++|||||||++|++.|+++||+||
T Consensus 599 el~~-~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg~gtdvAkeaADiVL 677 (903)
T PRK15122 599 EIEA-MDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVDSGADIAKESADIIL 677 (903)
T ss_pred hhhh-CCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeCcccHHHHHhcCEEE
Confidence 5542 334456778888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh-hhcccccHHHHHHHHHhcc
Q 013069 302 TEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQ-VL-ELNFLFTLDTVIAILQTAF 362 (450)
Q Consensus 302 ~~~~l~~i~~~I~~~R~~~~~i~~~~~~~~~~~~~~i~l~-~~-~~~~~~pl~~~~~l~~~~~ 362 (450)
++++|+.|+.+|++||++|+||++|+.|.+..++..++.. ++ .+..++|+.++++|+...+
T Consensus 678 ldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nli 740 (903)
T PRK15122 678 LEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLM 740 (903)
T ss_pred ecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHH
Confidence 9999999999999999999999999999997655443332 22 2335589999999844433
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-63 Score=551.12 Aligned_cols=351 Identities=29% Similarity=0.470 Sum_probs=295.3
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccC--CCChHHHHHHHhhcCch--hhhhcccEE
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVE--NLDVIDAAIVGMLADPK--EARADIQEV 76 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~--~~~pi~~ai~~~~~~~~--~~~~~~~~l 76 (450)
||++|+||||||||||+|+|+|.+.. . ..+.+.++++.+++.++... ..||+|.|++.++.... .....|+.+
T Consensus 368 lg~v~vic~DKTGTLT~n~m~V~~~~-~--~~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~~~~~~~~~~ 444 (902)
T PRK10517 368 FGAMDILCTDKTGTLTQDKIVLENHT-D--ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESARSLASRWQKI 444 (902)
T ss_pred ccCCCEEEecCCCccccceEEEEEEe-c--CCCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchhhhhhcCceE
Confidence 68999999999999999999998753 1 23456677888877755432 35799999998875422 234568889
Q ss_pred EEeccCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcC----------ChhhHHHHHHHHHHHHHhcchhhhhhceec
Q 013069 77 HFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN----------KSKIGRKVNAVINKFAERGLRSLAVAYQEV 146 (450)
Q Consensus 77 ~~~pF~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~----------~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~ 146 (450)
+.+||++.+|+|++++.+.++....++||+|+.|+++|.. +++..+.+.+..++++++|+|++++||+++
T Consensus 445 ~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~ 524 (902)
T PRK10517 445 DEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYL 524 (902)
T ss_pred EEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecC
Confidence 9999999999999998776777789999999999999962 123455677788999999999999999987
Q ss_pred CCCCcC---CCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCch
Q 013069 147 PEGSKE---SSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDR 223 (450)
Q Consensus 147 ~~~~~~---~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~ 223 (450)
+..+.+ ..|++++|+|+++++||||++++++|++|+++|++|+|+|||++.+|.++|+++||.. ..++.|.+.
T Consensus 525 ~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~----~~v~~G~el 600 (902)
T PRK10517 525 PAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA----GEVLIGSDI 600 (902)
T ss_pred CccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc----cCceeHHHH
Confidence 643321 2367999999999999999999999999999999999999999999999999999952 345666555
Q ss_pred hhhhhcCChhHHhhhccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecC
Q 013069 224 DESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 303 (450)
Q Consensus 224 ~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~ 303 (450)
+ .+.+.++++.+++.++|+|++|+||.++|+.||++|++|+|+|||+||+|||++|||||||++|+|.|+++||+||++
T Consensus 601 ~-~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAkeaADiVLld 679 (902)
T PRK10517 601 E-TLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAADIILLE 679 (902)
T ss_pred H-hCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHHHHHhCCEEEec
Confidence 4 334445777888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hh-hcccccHHHHHHHHH
Q 013069 304 PGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQV-LE-LNFLFTLDTVIAILQ 359 (450)
Q Consensus 304 ~~l~~i~~~I~~~R~~~~~i~~~~~~~~~~~~~~i~l~~-~~-~~~~~pl~~~~~l~~ 359 (450)
++|..|+.+|++||++|+||++|+.|.+..++..++..+ +. +..++|+.++++|+.
T Consensus 680 d~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~i 737 (902)
T PRK10517 680 KSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQ 737 (902)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHH
Confidence 999999999999999999999999999987665554433 22 235579999999833
|
|
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-64 Score=522.05 Aligned_cols=436 Identities=22% Similarity=0.314 Sum_probs=332.1
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCC--------CChH--HHHHHH-HHhcc-------------cCCCChHH
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGG--------VDAD--TVVLMA-ARASQ-------------VENLDVID 56 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~--------~~~~--~il~~a-a~~~~-------------~~~~~pi~ 56 (450)
||..++||+|||||||+|.|+|.+.++....+. .++. +++..+ +..+. ....+|.+
T Consensus 432 MGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE 511 (1034)
T KOG0204|consen 432 MGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTE 511 (1034)
T ss_pred cCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHH
Confidence 789999999999999999999999887322211 2211 122111 11110 11236899
Q ss_pred HHHHHhhc----CchhhhhcccEEEEeccCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcC-----------ChhhH
Q 013069 57 AAIVGMLA----DPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN-----------KSKIG 121 (450)
Q Consensus 57 ~ai~~~~~----~~~~~~~~~~~l~~~pF~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~-----------~~~~~ 121 (450)
+||+++.. +....|.....++++||||++|+|+++++.++|..+.++|||+|.++..|.. +++-.
T Consensus 512 ~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~ 591 (1034)
T KOG0204|consen 512 CALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDR 591 (1034)
T ss_pred HHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHH
Confidence 99998753 4455667778899999999999999999987776349999999999999962 34445
Q ss_pred HHHHHHHHHHHHhcchhhhhhceecCCC-------C-cCCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcC
Q 013069 122 RKVNAVINKFAERGLRSLAVAYQEVPEG-------S-KESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITG 193 (450)
Q Consensus 122 ~~~~~~~~~~a~~Glr~l~vA~~~~~~~-------~-~~~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTG 193 (450)
..+++.++.||++|+|++|+||++++.. + .+.++.+++++|+++++||.||+++++|+.|+.+|+.|.|+||
T Consensus 592 ~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTG 671 (1034)
T KOG0204|consen 592 KSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTG 671 (1034)
T ss_pred HHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeC
Confidence 6899999999999999999999984432 1 1345689999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhhHHHHHHHHhhcCCEEEEecCCCCC
Q 013069 194 DQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVND 273 (450)
Q Consensus 194 D~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND 273 (450)
||..||++||.+|||.++.-+-..+.|.+.. .+...+.++++.+..++||.+|.+|+-+|+.|+.+|++|+.+|||.||
T Consensus 672 DNI~TAkAIA~eCGILt~~~d~~~lEG~eFr-~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTND 750 (1034)
T KOG0204|consen 672 DNINTAKAIARECGILTPGGDFLALEGKEFR-ELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTND 750 (1034)
T ss_pred CcHHHHHHHHHHcccccCCCccceecchhhh-hcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCC
Confidence 9999999999999998876666777777765 445556778899999999999999999999999999999999999999
Q ss_pred hHhHhhCCeeEEec-cchHHHhhccCEEecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhc-cccc
Q 013069 274 APALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVL-ELN-FLFT 350 (450)
Q Consensus 274 ~~al~~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~~~~~i~~~~~~~~~~~~~~i~l~~~-~~~-~~~p 350 (450)
+|||++||||+||| .|++.||++||||+++++|++|+.++.|||.+|.||+||+.|.+..+..++...+. .+. .-.|
T Consensus 751 aPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsP 830 (1034)
T KOG0204|consen 751 APALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSP 830 (1034)
T ss_pred chhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCcc
Confidence 99999999999999 89999999999999999999999999999999999999999998765555555443 332 5589
Q ss_pred HHHHHHH-HHhccCcccccchhHHHHHHHHhhhhhhcCCCCCCccccccccccccchhHHHHHhhhhHHhhhhhhcccch
Q 013069 351 LDTVIAI-LQTAFTSKKDFGKEERELLWAHAQRTLHGLQPPDTSMFSVRSSYGELSWMAEEARRRAEIARLRELHTLKGH 429 (450)
Q Consensus 351 l~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (450)
|..+|+| .++.+-.+..+....+-+.-....|.+.|-..| +..+++++.+= -+...++--+-.|...
T Consensus 831 LtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~----LIt~tMwknil--------~qa~YQl~vl~iL~F~ 898 (1034)
T KOG0204|consen 831 LTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKP----LITRTMWKNIL--------GQAVYQLIVLFILNFA 898 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCc----chHHHHHHHHH--------HHHHHHHHHHHHHHhc
Confidence 9999998 222221111111111111111223444444444 44555555433 5566666666667666
Q ss_pred hhhhhhccCCChhhhhcccc
Q 013069 430 VESLIRLKGLDIDAIQQSYS 449 (450)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~ 449 (450)
-++...+.+.+-..-+++||
T Consensus 899 G~~if~~~~~~~~~~~~~nT 918 (1034)
T KOG0204|consen 899 GKSIFGLNGPLHSPPSVHNT 918 (1034)
T ss_pred chhhhccCCCCCCchhhhee
Confidence 66666556555433334444
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-62 Score=542.91 Aligned_cols=352 Identities=26% Similarity=0.442 Sum_probs=293.4
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccC--CCChHHHHHHHhhcCc--hhhhhcccEE
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVE--NLDVIDAAIVGMLADP--KEARADIQEV 76 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~--~~~pi~~ai~~~~~~~--~~~~~~~~~l 76 (450)
||++|+||||||||||+|+|+|.+.+. ..+.+.++++.+++.++..+ ..||+|.|++.++... ...+..++.+
T Consensus 333 lg~v~vic~DKTGTLT~~~m~v~~~~~---~~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~ 409 (867)
T TIGR01524 333 FGAMDILCTDKTGTLTQDKIELEKHID---SSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQTASRWKKV 409 (867)
T ss_pred ccCccEEEecCCCccccCeEEEEEEec---CCCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhchhhHhhcCceE
Confidence 689999999999999999999998531 23455677888777654422 2479999999887542 1234567889
Q ss_pred EEeccCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcC----------ChhhHHHHHHHHHHHHHhcchhhhhhceec
Q 013069 77 HFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN----------KSKIGRKVNAVINKFAERGLRSLAVAYQEV 146 (450)
Q Consensus 77 ~~~pF~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~----------~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~ 146 (450)
+.+||++.+|+|++++.+.++..+.++||+|+.|+++|.. +++.++.+++.+++++++|+|++++||+++
T Consensus 410 ~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~ 489 (867)
T TIGR01524 410 DEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTL 489 (867)
T ss_pred EEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecc
Confidence 9999999999999998766666789999999999999962 233456778888999999999999999988
Q ss_pred CCCCc---CCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCch
Q 013069 147 PEGSK---ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDR 223 (450)
Q Consensus 147 ~~~~~---~~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~ 223 (450)
+.++. +..|++|+|+|+++++||||++++++|++|+++|++|+|+|||+..+|.++|+++||.. ..++.|.+.
T Consensus 490 ~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~----~~v~~g~~l 565 (867)
T TIGR01524 490 KVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA----NDFLLGADI 565 (867)
T ss_pred CcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC----CCeeecHhh
Confidence 65432 12478899999999999999999999999999999999999999999999999999963 245555544
Q ss_pred hhhhhcCChhHHhhhccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecC
Q 013069 224 DESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 303 (450)
Q Consensus 224 ~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~ 303 (450)
+. +...++.+.+++.++|||++|+||.++|+.+|++|++|+|+|||+||+|||++|||||||++|++.|+++||+||++
T Consensus 566 ~~-~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~aADiVLld 644 (867)
T TIGR01524 566 EE-LSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKEASDIILLE 644 (867)
T ss_pred hh-CCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHHHHHhCCEEEec
Confidence 32 23345667788889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhh-cccccHHHHHHHHHh
Q 013069 304 PGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQV-LEL-NFLFTLDTVIAILQT 360 (450)
Q Consensus 304 ~~l~~i~~~I~~~R~~~~~i~~~~~~~~~~~~~~i~l~~-~~~-~~~~pl~~~~~l~~~ 360 (450)
++|+.|+.+|++||++|+||++|+.|.+..++..++..+ +.+ ..++|+.++++|+..
T Consensus 645 d~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~in 703 (867)
T TIGR01524 645 KSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQN 703 (867)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Confidence 999999999999999999999999999976555544332 222 355899999998433
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-62 Score=550.52 Aligned_cols=357 Identities=27% Similarity=0.425 Sum_probs=288.1
Q ss_pred CccccEEEeCcccccccCceEEEeEeeec---c-----cCCC--------------------------------------
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEI---F-----AGGV-------------------------------------- 34 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~---~-----~~~~-------------------------------------- 34 (450)
||.+++||+|||||||+|+|+|.++++.. + ..++
T Consensus 356 LG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (1053)
T TIGR01523 356 LGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKE 435 (1053)
T ss_pred ccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCCCCcccccccccccccccccccccccccccccccccccc
Confidence 79999999999999999999999986531 0 0000
Q ss_pred -C---------hHHHHHHHHHhccc------------CCCChHHHHHHHhhcCch----------hh-------------
Q 013069 35 -D---------ADTVVLMAARASQV------------ENLDVIDAAIVGMLADPK----------EA------------- 69 (450)
Q Consensus 35 -~---------~~~il~~aa~~~~~------------~~~~pi~~ai~~~~~~~~----------~~------------- 69 (450)
+ ..+++..++.|... ...||.|.|++.++...+ ..
T Consensus 436 ~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (1053)
T TIGR01523 436 IDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQ 515 (1053)
T ss_pred cccccccccHHHHHHHHHHHhccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhcccccccccc
Confidence 0 01355555555321 124899999998764211 00
Q ss_pred ------hhcccEEEEeccCCCCceEEEEEEccCC-eEEEEEcCCHHHHHhhhcC------------ChhhHHHHHHHHHH
Q 013069 70 ------RADIQEVHFLPFDPTGKRTALTYIDSEG-KMHRVTKGSPEQILNLLHN------------KSKIGRKVNAVINK 130 (450)
Q Consensus 70 ------~~~~~~l~~~pF~~~~kr~svi~~~~~g-~~~~~~KGa~~~i~~~~~~------------~~~~~~~~~~~~~~ 130 (450)
+..|+.++.+||+|.+|||++++++.++ ++++|+|||||.|+++|.. +++.++.+.+.+++
T Consensus 516 ~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~ 595 (1053)
T TIGR01523 516 HNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMES 595 (1053)
T ss_pred ccccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHH
Confidence 2347789999999999999999986544 4789999999999999962 12345678888999
Q ss_pred HHHhcchhhhhhceecCCCC------------cCCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHH
Q 013069 131 FAERGLRSLAVAYQEVPEGS------------KESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAI 198 (450)
Q Consensus 131 ~a~~Glr~l~vA~~~~~~~~------------~~~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~ 198 (450)
|+++|+|||++||+.+++++ .+..|++|+|+|+++++||||++++++|+.|+++||+|+|+|||++.|
T Consensus 596 ~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~t 675 (1053)
T TIGR01523 596 LAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPET 675 (1053)
T ss_pred HHhcCCeEEEEEEEECCchhccchhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHH
Confidence 99999999999999887532 234578999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCC--------CCccccCCchhhhhhcCChhHHhhhccceeecChhhHHHHHHHHhhcCCEEEEecCC
Q 013069 199 AKETGRRLGMGTNMY--------PSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNG 270 (450)
Q Consensus 199 a~~ia~~lgi~~~~~--------~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG 270 (450)
|.++|+++||..... ...++.|.+.+. +.+.+++++++...+|||++|+||.++|+.+|+.|++|+|+|||
T Consensus 676 A~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~-l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDG 754 (1053)
T TIGR01523 676 AKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDA-LSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDG 754 (1053)
T ss_pred HHHHHHHcCCCCccccccccccccceeeehHHhhh-cCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCC
Confidence 999999999964311 234566655432 23334566777788999999999999999999999999999999
Q ss_pred CCChHhHhhCCeeEEec-cchHHHhhccCEEecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhc--
Q 013069 271 VNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVL-ELN-- 346 (450)
Q Consensus 271 ~ND~~al~~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~~~~~i~~~~~~~~~~~~~~i~l~~~-~~~-- 346 (450)
+||+|||+.|||||||| +|++.|+++||+|+++++|+.|+.+|.+||++|+||++++.|.+..++..+...+. .++
T Consensus 755 vNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~ 834 (1053)
T TIGR01523 755 VNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRD 834 (1053)
T ss_pred cchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 99999999999999998 89999999999999999999999999999999999999999999876655554433 232
Q ss_pred ----ccccHHHHHHHH
Q 013069 347 ----FLFTLDTVIAIL 358 (450)
Q Consensus 347 ----~~~pl~~~~~l~ 358 (450)
..+|++++++|+
T Consensus 835 ~~g~~~~Pl~~~qiL~ 850 (1053)
T TIGR01523 835 ENGKSVFPLSPVEILW 850 (1053)
T ss_pred ccCCCcCchHHHHHHH
Confidence 147999999984
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-61 Score=542.55 Aligned_cols=354 Identities=25% Similarity=0.375 Sum_probs=288.9
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCC-------CC--hHHHHHHHHHh-ccc-----------CCCChHHHHH
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGG-------VD--ADTVVLMAARA-SQV-----------ENLDVIDAAI 59 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~-------~~--~~~il~~aa~~-~~~-----------~~~~pi~~ai 59 (450)
||++|+||||||||||+|+|+|.+++......+ .+ ..+++..++.+ +.. ...||+|.|+
T Consensus 373 lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~Al 452 (941)
T TIGR01517 373 MGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECAL 452 (941)
T ss_pred ccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHH
Confidence 789999999999999999999999765321000 01 12233333332 221 1247999999
Q ss_pred HHhhcC----chhhhhcccEEEEeccCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcCC----------hhhHHHHH
Q 013069 60 VGMLAD----PKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNK----------SKIGRKVN 125 (450)
Q Consensus 60 ~~~~~~----~~~~~~~~~~l~~~pF~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~~----------~~~~~~~~ 125 (450)
+.++.. ....+..++.++.+||++.+|+|++++...+++++.++|||||.|+++|... .+.++.+.
T Consensus 453 l~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~i~ 532 (941)
T TIGR01517 453 LGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISDDKDRCA 532 (941)
T ss_pred HHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHHHH
Confidence 988752 2223446777889999999999999998766778999999999999999631 01346678
Q ss_pred HHHHHHHHhcchhhhhhceecCCCCc---CCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHH
Q 013069 126 AVINKFAERGLRSLAVAYQEVPEGSK---ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKET 202 (450)
Q Consensus 126 ~~~~~~a~~Glr~l~vA~~~~~~~~~---~~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~i 202 (450)
+.+++|+++|+|++++||++++.++. +..|++|+|+|+++++||+|++++++|++|+++|++++|+|||++.+|.++
T Consensus 533 ~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~i 612 (941)
T TIGR01517 533 DVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAI 612 (941)
T ss_pred HHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHH
Confidence 88999999999999999999865443 234789999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCe
Q 013069 203 GRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI 282 (450)
Q Consensus 203 a~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~Adv 282 (450)
|+++||..+. ..++.|.+.+. +...++++.+.+..+|||++|+||.++|+.||++|++|+|+|||+||+|||++|||
T Consensus 613 A~~~GI~~~~--~~vi~G~~~~~-l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdV 689 (941)
T TIGR01517 613 ARNCGILTFG--GLAMEGKEFRR-LVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADV 689 (941)
T ss_pred HHHcCCCCCC--ceEeeHHHhhh-CCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCc
Confidence 9999997432 34566655432 33345667788889999999999999999999999999999999999999999999
Q ss_pred eEEec-cchHHHhhccCEEecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hh-cccccHHHHHHH
Q 013069 283 GIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVL-EL-NFLFTLDTVIAI 357 (450)
Q Consensus 283 GIa~~-~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~~~~~i~~~~~~~~~~~~~~i~l~~~-~~-~~~~pl~~~~~l 357 (450)
||||| +|++.|+++||+|+++++|+.|+.+|.+||++|+||++++.|.+..++..+.+.+. .+ ....|+++++++
T Consensus 690 GIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil 767 (941)
T TIGR01517 690 GFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLL 767 (941)
T ss_pred ceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHH
Confidence 99999 89999999999999999999999999999999999999999999877766555443 22 356799999998
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-60 Score=537.07 Aligned_cols=356 Identities=25% Similarity=0.376 Sum_probs=287.3
Q ss_pred CccccEEEeCcccccccCceEEEeEeeeccc---CC--------CC-----hHHHHHHHHHhccc---------------
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFA---GG--------VD-----ADTVVLMAARASQV--------------- 49 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~---~~--------~~-----~~~il~~aa~~~~~--------------- 49 (450)
||++++||||||||||+|+|+|.++++.... .+ .+ .+.++..++.|+..
T Consensus 341 lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~ 420 (997)
T TIGR01106 341 LGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRA 420 (997)
T ss_pred hcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeeccccCCCcccccc
Confidence 6899999999999999999999998752110 00 11 12455666666421
Q ss_pred CCCChHHHHHHHhhcC----chhhhhcccEEEEeccCCCCceEEEEEEc--c-CCeEEEEEcCCHHHHHhhhcC------
Q 013069 50 ENLDVIDAAIVGMLAD----PKEARADIQEVHFLPFDPTGKRTALTYID--S-EGKMHRVTKGSPEQILNLLHN------ 116 (450)
Q Consensus 50 ~~~~pi~~ai~~~~~~----~~~~~~~~~~l~~~pF~~~~kr~svi~~~--~-~g~~~~~~KGa~~~i~~~~~~------ 116 (450)
...||.|.|++.++.. ....+..++.++.+||+|.+|||++++.. . ++++++|+|||||.|+++|..
T Consensus 421 ~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~ 500 (997)
T TIGR01106 421 VAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGK 500 (997)
T ss_pred cCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCC
Confidence 1247999999988642 23345678899999999999999988763 2 246789999999999999952
Q ss_pred ----ChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcC-----------CCCCCcEEEEeccCCCCCCcchHHHHHHH
Q 013069 117 ----KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKE-----------SSGSPWQFIGLIPLFDPPIHDSAETIRRA 181 (450)
Q Consensus 117 ----~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~-----------~~e~~~~~lG~i~l~D~lr~~~~~~I~~l 181 (450)
+++.++.+++.+++|+++|+|++++||+.+++++.+ ..|++|+|+|+++++||||++++++|++|
T Consensus 501 ~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l 580 (997)
T TIGR01106 501 EQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKC 580 (997)
T ss_pred cccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChHHHHHHHHHH
Confidence 234566788899999999999999999988653211 22789999999999999999999999999
Q ss_pred HhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC----------------------CccccCCchhhhhhcCChhHHhhhc
Q 013069 182 LSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP----------------------SSALSGQDRDESIVALPVDELIEKA 239 (450)
Q Consensus 182 ~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~----------------------~~~l~~~~~~~~~~~~~~~~~~~~~ 239 (450)
+++|++|+|+|||+..+|.++|+++|+..+... ..++.|.+.+. +.+.++++.++++
T Consensus 581 ~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~-l~~~el~~~~~~~ 659 (997)
T TIGR01106 581 RSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD-MTSEQLDEILKYH 659 (997)
T ss_pred HHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhh-CCHHHHHHHHHhc
Confidence 999999999999999999999999999643210 13455544432 2222455666665
Q ss_pred c--ceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEec-cchHHHhhccCEEecCCCchHHHHHHHHH
Q 013069 240 D--GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLIS 316 (450)
Q Consensus 240 ~--v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~I~~~ 316 (450)
. +|||++|+||.+||+.+|+.|++|+|+|||+||+|||++|||||||| .|++.++++||+|+++++|+.|+.+|.+|
T Consensus 660 ~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai~~G 739 (997)
T TIGR01106 660 TEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEG 739 (997)
T ss_pred CCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHHHHH
Confidence 4 99999999999999999999999999999999999999999999999 68999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh-hc-ccccHHHHHHH
Q 013069 317 RAIFQRMRNYMVRGIDGLSSTEFIQVLE-LN-FLFTLDTVIAI 357 (450)
Q Consensus 317 R~~~~~i~~~~~~~~~~~~~~i~l~~~~-~~-~~~pl~~~~~l 357 (450)
|++|.|+++++.|.+..++..++..+.. ++ .+.|++++++|
T Consensus 740 R~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL 782 (997)
T TIGR01106 740 RLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITIL 782 (997)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHH
Confidence 9999999999999998766655554433 22 55789999998
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-59 Score=520.20 Aligned_cols=355 Identities=29% Similarity=0.405 Sum_probs=284.9
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecc-----------cCCCC-------------------hHHHHHHHHHhcccC
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIF-----------AGGVD-------------------ADTVVLMAARASQVE 50 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~-----------~~~~~-------------------~~~il~~aa~~~~~~ 50 (450)
||++|+||||||||||+|+|+|.+++.... ..+++ .+.++..++.|....
T Consensus 286 lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~ 365 (917)
T TIGR01116 286 LGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSS 365 (917)
T ss_pred ccCceEEEecCCccccCCeEEEEEEEecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCe
Confidence 689999999999999999999999764210 00000 123445555554321
Q ss_pred ------------CCChHHHHHHHhhcCch--------------------hhhhcccEEEEeccCCCCceEEEEEEccCCe
Q 013069 51 ------------NLDVIDAAIVGMLADPK--------------------EARADIQEVHFLPFDPTGKRTALTYIDSEGK 98 (450)
Q Consensus 51 ------------~~~pi~~ai~~~~~~~~--------------------~~~~~~~~l~~~pF~~~~kr~svi~~~~~g~ 98 (450)
..||.|.|++.++.+.+ ..+..|+.++.+||+|.+|||++++++ +++
T Consensus 366 ~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~ 444 (917)
T TIGR01116 366 LDFNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STG 444 (917)
T ss_pred eeccccCCceeeccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCc
Confidence 24899999998754311 123457789999999999999999875 467
Q ss_pred EEEEEcCCHHHHHhhhcC-----------ChhhHHHHHHHHHHHHH-hcchhhhhhceecCCCC----------cCCCCC
Q 013069 99 MHRVTKGSPEQILNLLHN-----------KSKIGRKVNAVINKFAE-RGLRSLAVAYQEVPEGS----------KESSGS 156 (450)
Q Consensus 99 ~~~~~KGa~~~i~~~~~~-----------~~~~~~~~~~~~~~~a~-~Glr~l~vA~~~~~~~~----------~~~~e~ 156 (450)
+++|+|||||.|+++|.. +++..+.+.+.+++|++ +|+|++++||+.+++++ .+..|+
T Consensus 445 ~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~ 524 (917)
T TIGR01116 445 NKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIES 524 (917)
T ss_pred EEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcC
Confidence 889999999999999962 12345678888999999 99999999999986432 234588
Q ss_pred CcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC--CccccCCchhhhhhcCChhH
Q 013069 157 PWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP--SSALSGQDRDESIVALPVDE 234 (450)
Q Consensus 157 ~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~--~~~l~~~~~~~~~~~~~~~~ 234 (450)
+|+|+|+++++||||++++++|++|+++|++++|+|||+..+|.++|+++|+..+... ...+.|.+.+. +...+...
T Consensus 525 ~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~-~~~~~~~~ 603 (917)
T TIGR01116 525 DLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDE-MGPAKQRA 603 (917)
T ss_pred CcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhh-CCHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999753221 12344433221 22223445
Q ss_pred HhhhccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 235 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 235 ~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
.+.+..+|||++|+||.++|+.+|+.|++|+|+|||.||+|||+.|||||+|+++++.++++||+++.+++|+.|+.++.
T Consensus 604 ~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~ 683 (917)
T TIGR01116 604 ACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVE 683 (917)
T ss_pred hhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHH
Confidence 56667799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hc-ccccHHHHHHH
Q 013069 315 ISRAIFQRMRNYMVRGIDGLSSTEFIQVLE-LN-FLFTLDTVIAI 357 (450)
Q Consensus 315 ~~R~~~~~i~~~~~~~~~~~~~~i~l~~~~-~~-~~~pl~~~~~l 357 (450)
+||++|+|+++++.|.+..++..++..+.. ++ ...|+++++++
T Consensus 684 ~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qll 728 (917)
T TIGR01116 684 EGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGLIPVQLL 728 (917)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcCCchHHHHHHH
Confidence 999999999999999998665554444332 33 44799999987
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-59 Score=528.76 Aligned_cols=354 Identities=23% Similarity=0.256 Sum_probs=275.6
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCC----------CChHHHHHHHHHhccc------CCCChHHHHHHHhhc
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGG----------VDADTVVLMAARASQV------ENLDVIDAAIVGMLA 64 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~----------~~~~~il~~aa~~~~~------~~~~pi~~ai~~~~~ 64 (450)
+|++|++|||||||||+|+|+|.+++....... .....++...+.|... ...||+|.|++.+.+
T Consensus 445 lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~ 524 (1054)
T TIGR01657 445 AGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATG 524 (1054)
T ss_pred cceeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCC
Confidence 689999999999999999999998754211000 0112233333333321 125899999999764
Q ss_pred Cchhh-------------------hhcccEEEEeccCCCCceEEEEEEcc-CCeEEEEEcCCHHHHHhhhcCChhhHHHH
Q 013069 65 DPKEA-------------------RADIQEVHFLPFDPTGKRTALTYIDS-EGKMHRVTKGSPEQILNLLHNKSKIGRKV 124 (450)
Q Consensus 65 ~~~~~-------------------~~~~~~l~~~pF~~~~kr~svi~~~~-~g~~~~~~KGa~~~i~~~~~~~~~~~~~~ 124 (450)
..... ...+++++.+||+|.+|||+++++.. +++++.++|||||.|+++|.. +..++.+
T Consensus 525 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~-~~~p~~~ 603 (1054)
T TIGR01657 525 WTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSP-ETVPSDY 603 (1054)
T ss_pred CEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCC-cCCChhH
Confidence 21000 14578899999999999999999864 356789999999999999974 3467888
Q ss_pred HHHHHHHHHhcchhhhhhceecCCC--------CcCCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcH
Q 013069 125 NAVINKFAERGLRSLAVAYQEVPEG--------SKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQL 196 (450)
Q Consensus 125 ~~~~~~~a~~Glr~l~vA~~~~~~~--------~~~~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~ 196 (450)
++.+++|+++|+||+++||+++++. +++..|++|+|+|+++++||+|++++++|+.|+++|++++|+|||++
T Consensus 604 ~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~ 683 (1054)
T TIGR01657 604 QEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNP 683 (1054)
T ss_pred HHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCH
Confidence 9999999999999999999998743 23456899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCC---------------------------------------------------CccccCCchhh
Q 013069 197 AIAKETGRRLGMGTNMYP---------------------------------------------------SSALSGQDRDE 225 (450)
Q Consensus 197 ~~a~~ia~~lgi~~~~~~---------------------------------------------------~~~l~~~~~~~ 225 (450)
.||.++|+++||..+... ..++.|...+.
T Consensus 684 ~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~ 763 (1054)
T TIGR01657 684 LTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAV 763 (1054)
T ss_pred HHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHH
Confidence 999999999999643210 01112222111
Q ss_pred h--hhcCChhHHhhhccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecC
Q 013069 226 S--IVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 303 (450)
Q Consensus 226 ~--~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~ 303 (450)
. .....+.+++.++.+|||++|+||.++|+.||+.|++|+|+|||+||+||||+|||||||+++ + |..+||+++.+
T Consensus 764 l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-d-as~AA~f~l~~ 841 (1054)
T TIGR01657 764 LQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-E-ASVAAPFTSKL 841 (1054)
T ss_pred HHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-c-ceeecccccCC
Confidence 1 111235567788899999999999999999999999999999999999999999999999865 3 45899999999
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccHHHHHHH
Q 013069 304 PGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELNFLFTLDTVIAI 357 (450)
Q Consensus 304 ~~l~~i~~~I~~~R~~~~~i~~~~~~~~~~~~~~i~l~~~~~~~~~pl~~~~~l 357 (450)
+++++|+.+|++||+++.++++.+.|.+.+....++......+...|+..++++
T Consensus 842 ~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~Q~l 895 (1054)
T TIGR01657 842 ASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSILYLIGSNLGDGQFL 895 (1054)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcCccHHHH
Confidence 999999999999999999999888777665444433322222344788888876
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-57 Score=508.31 Aligned_cols=349 Identities=29% Similarity=0.434 Sum_probs=285.4
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecc-c---C--CC-------------------ChHHHHHHHHHhcccC-----
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIF-A---G--GV-------------------DADTVVLMAARASQVE----- 50 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~-~---~--~~-------------------~~~~il~~aa~~~~~~----- 50 (450)
||++|+||||||||||+|+|+|.+++.... . . +. ...+++..++.|....
T Consensus 321 Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 400 (884)
T TIGR01522 321 LGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEA 400 (884)
T ss_pred ccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCCCeecCCC
Confidence 789999999999999999999999764210 0 0 00 1134555555554321
Q ss_pred ---CCChHHHHHHHhhcCc--hhhhhcccEEEEeccCCCCceEEEEEEc-cCCeEEEEEcCCHHHHHhhhcC--------
Q 013069 51 ---NLDVIDAAIVGMLADP--KEARADIQEVHFLPFDPTGKRTALTYID-SEGKMHRVTKGSPEQILNLLHN-------- 116 (450)
Q Consensus 51 ---~~~pi~~ai~~~~~~~--~~~~~~~~~l~~~pF~~~~kr~svi~~~-~~g~~~~~~KGa~~~i~~~~~~-------- 116 (450)
..||+|.|++.++... ...+..++.++.+||++.+|||++++.. .+++++.++||+||.|+..|..
T Consensus 401 ~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~ 480 (884)
T TIGR01522 401 DTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKT 480 (884)
T ss_pred CCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCe
Confidence 1369999999887532 2233468889999999999999998875 3577899999999999999952
Q ss_pred ---ChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcC
Q 013069 117 ---KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITG 193 (450)
Q Consensus 117 ---~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTG 193 (450)
+++.++.+.+.+++|+++|+|++++||+++ +.+|+|+|+++++||+|++++++|+.|+++|++++|+||
T Consensus 481 ~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTG 552 (884)
T TIGR01522 481 LTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITG 552 (884)
T ss_pred eeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC--------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECC
Confidence 123456678888999999999999999975 357999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhhHHHHHHHHhhcCCEEEEecCCCCC
Q 013069 194 DQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVND 273 (450)
Q Consensus 194 D~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND 273 (450)
|+..+|.++|+++||.... ..++.|.+.+ .+...++++.+.+..+|||++|+||..+|+.+|+.|+.|+|+|||+||
T Consensus 553 D~~~tA~~ia~~~Gi~~~~--~~~v~g~~l~-~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND 629 (884)
T TIGR01522 553 DSQETAVSIARRLGMPSKT--SQSVSGEKLD-AMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVND 629 (884)
T ss_pred CCHHHHHHHHHHcCCCCCC--CceeEhHHhH-hCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCccc
Confidence 9999999999999997432 2344554443 233345667788889999999999999999999999999999999999
Q ss_pred hHhHhhCCeeEEec-cchHHHhhccCEEecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhc-cccc
Q 013069 274 APALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQV-LELN-FLFT 350 (450)
Q Consensus 274 ~~al~~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~~~~~i~~~~~~~~~~~~~~i~l~~-~~~~-~~~p 350 (450)
+|||++|||||+|| ++++.++++||+++++++|+.|+.++++||++|+||++++.|.+..++..+.+.+ +.++ ...|
T Consensus 630 ~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~p 709 (884)
T TIGR01522 630 APALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNP 709 (884)
T ss_pred HHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCc
Confidence 99999999999998 7999999999999999999999999999999999999999999986655554432 3333 5579
Q ss_pred HHHHHHHHHh
Q 013069 351 LDTVIAILQT 360 (450)
Q Consensus 351 l~~~~~l~~~ 360 (450)
++++++|+..
T Consensus 710 l~~~qiL~in 719 (884)
T TIGR01522 710 LNAMQILWIN 719 (884)
T ss_pred hhHHHHHHHH
Confidence 9999998433
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-57 Score=514.67 Aligned_cols=338 Identities=21% Similarity=0.301 Sum_probs=268.1
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCC---------------------------------C------------
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGV---------------------------------D------------ 35 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~---------------------------------~------------ 35 (450)
||++++||+|||||||+|+|++.++++....++. +
T Consensus 356 LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (1057)
T TIGR01652 356 LGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKP 435 (1057)
T ss_pred hcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCc
Confidence 7999999999999999999999999864211110 0
Q ss_pred ----hHHHHHHHHHhccc-------C-------CCChHHHHHHHhhcCch------------------hhhhcccEEEEe
Q 013069 36 ----ADTVVLMAARASQV-------E-------NLDVIDAAIVGMLADPK------------------EARADIQEVHFL 79 (450)
Q Consensus 36 ----~~~il~~aa~~~~~-------~-------~~~pi~~ai~~~~~~~~------------------~~~~~~~~l~~~ 79 (450)
-.+++..++.|... . ..+|.|.|++.++...+ .....|++++.+
T Consensus 436 ~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~ 515 (1057)
T TIGR01652 436 NAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVL 515 (1057)
T ss_pred hhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEec
Confidence 02334444444321 1 24799999998764321 012468889999
Q ss_pred ccCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcC-ChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCc-------
Q 013069 80 PFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN-KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK------- 151 (450)
Q Consensus 80 pF~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~-~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~------- 151 (450)
||++.+|||++++++.+|++++++||||+.|+++|.. .++..+.+.+.+++|+.+|+|++++||+.++++++
T Consensus 516 pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~ 595 (1057)
T TIGR01652 516 EFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEY 595 (1057)
T ss_pred ccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHH
Confidence 9999999999999988888899999999999999974 34567788899999999999999999999986531
Q ss_pred ------------------CCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC
Q 013069 152 ------------------ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY 213 (450)
Q Consensus 152 ------------------~~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~ 213 (450)
+..|++++|+|+++++||||++++++|+.|+++||+|||+|||+.+||.++|++||+.....
T Consensus 596 ~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~ 675 (1057)
T TIGR01652 596 NEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNM 675 (1057)
T ss_pred HHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC
Confidence 34589999999999999999999999999999999999999999999999999999976432
Q ss_pred CC---------------------------------------ccccCCchhhhhhcC---ChhHHhhhcc--ceeecChhh
Q 013069 214 PS---------------------------------------SALSGQDRDESIVAL---PVDELIEKAD--GFAGVFPEH 249 (450)
Q Consensus 214 ~~---------------------------------------~~l~~~~~~~~~~~~---~~~~~~~~~~--v~a~~~P~~ 249 (450)
.. .++.|...+..++.. .+.+++..+. +|||++|+|
T Consensus 676 ~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~q 755 (1057)
T TIGR01652 676 EQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQ 755 (1057)
T ss_pred eEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHH
Confidence 11 123333332222211 1233455555 999999999
Q ss_pred HHHHHHHHhhc-CCEEEEecCCCCChHhHhhCCeeEEec-cchHHHhhccCEEecCCCchHHHHHH-HHHHHHHHHHHHH
Q 013069 250 KYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAV-LISRAIFQRMRNY 326 (450)
Q Consensus 250 K~~iV~~lq~~-g~~v~~iGDG~ND~~al~~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~I-~~~R~~~~~i~~~ 326 (450)
|+++|+.+|+. |++|+|+|||+||+|||++|||||++. ....+|+.+||+++.+ |+.+..++ .+||++|+|++++
T Consensus 756 K~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~ 833 (1057)
T TIGR01652 756 KADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKM 833 (1057)
T ss_pred HHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHH
Confidence 99999999998 999999999999999999999999985 3444688999999975 99999988 7899999999999
Q ss_pred HHHHHHHHHHHHHH
Q 013069 327 MVRGIDGLSSTEFI 340 (450)
Q Consensus 327 ~~~~~~~~~~~i~l 340 (450)
+.|.+...+..++.
T Consensus 834 i~~~~~kn~~~~~~ 847 (1057)
T TIGR01652 834 ILYFFYKNLIFAII 847 (1057)
T ss_pred HHHHHHHHHHHHHH
Confidence 99988754433333
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-55 Score=498.12 Aligned_cols=330 Identities=21% Similarity=0.264 Sum_probs=262.2
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCC-----------------------------------------C-h--
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGV-----------------------------------------D-A-- 36 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~-----------------------------------------~-~-- 36 (450)
||+|++||+|||||||+|+|++.+|.+....+|. + +
T Consensus 450 LGqV~yIfSDKTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (1178)
T PLN03190 450 LGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEA 529 (1178)
T ss_pred hccceEEEEcCCCccccceEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhh
Confidence 7999999999999999999999999873211110 0 0
Q ss_pred ---HHHHHHHHHhccc------------------CCCChHHHHHHHhhcCch----------------hhhhcccEEEEe
Q 013069 37 ---DTVVLMAARASQV------------------ENLDVIDAAIVGMLADPK----------------EARADIQEVHFL 79 (450)
Q Consensus 37 ---~~il~~aa~~~~~------------------~~~~pi~~ai~~~~~~~~----------------~~~~~~~~l~~~ 79 (450)
.+++...+.|... ...+|.|.|++.++...+ ..+..|++++.+
T Consensus 530 ~~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~ 609 (1178)
T PLN03190 530 KHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLH 609 (1178)
T ss_pred HHHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEe
Confidence 1234444444321 112699999998875422 235678999999
Q ss_pred ccCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcC--ChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCc------
Q 013069 80 PFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN--KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK------ 151 (450)
Q Consensus 80 pF~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~--~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~------ 151 (450)
||+|.+|||++++++++|++++|+||||+.|+++|.. +.+..+.+.+.+++|+++|+|||++||+.++++++
T Consensus 610 pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~ 689 (1178)
T PLN03190 610 EFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFS 689 (1178)
T ss_pred cccccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHH
Confidence 9999999999999988888999999999999999964 24567788899999999999999999999976432
Q ss_pred -------------------CCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCC
Q 013069 152 -------------------ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNM 212 (450)
Q Consensus 152 -------------------~~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~ 212 (450)
+..|++|+|+|+++++||||++++++|+.|+++|++|||+|||+.++|.+||+.|||.++.
T Consensus 690 ~~~a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~ 769 (1178)
T PLN03190 690 FEAASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNK 769 (1178)
T ss_pred HHHhhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCC
Confidence 2458999999999999999999999999999999999999999999999999999997543
Q ss_pred CCCc-----------------------------------------------cccCCchhhhhh---cCChhHHhhhcc--
Q 013069 213 YPSS-----------------------------------------------ALSGQDRDESIV---ALPVDELIEKAD-- 240 (450)
Q Consensus 213 ~~~~-----------------------------------------------~l~~~~~~~~~~---~~~~~~~~~~~~-- 240 (450)
.... ++.|...+..+. ...+.+++.++.
T Consensus 770 ~~~i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~V 849 (1178)
T PLN03190 770 MTQIIINSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVV 849 (1178)
T ss_pred CeeEEecCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEE
Confidence 2111 111211111111 012334555666
Q ss_pred ceeecChhhHHHHHHHHhhc-CCEEEEecCCCCChHhHhhCCeeEEec-cchHHHhhccCEEecCCCchHHHHHHH-HHH
Q 013069 241 GFAGVFPEHKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVL-ISR 317 (450)
Q Consensus 241 v~a~~~P~~K~~iV~~lq~~-g~~v~~iGDG~ND~~al~~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~I~-~~R 317 (450)
+|||++|.||+++|+.+|+. +++|+|||||+||++||++|||||++. ....+|..+||+.+.+ |..+..++. +||
T Consensus 850 I~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~--Fr~L~rLLlvHGr 927 (1178)
T PLN03190 850 LCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQ--FRFLVPLLLVHGH 927 (1178)
T ss_pred EEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchhh--hHHHHHHHHHhCH
Confidence 69999999999999999987 589999999999999999999999985 4556888899999977 777777777 899
Q ss_pred HHHHHHHHHHHHHHH
Q 013069 318 AIFQRMRNYMVRGID 332 (450)
Q Consensus 318 ~~~~~i~~~~~~~~~ 332 (450)
+.|.|+.+.+.|.+.
T Consensus 928 ~~y~R~s~~i~y~fY 942 (1178)
T PLN03190 928 WNYQRMGYMILYNFY 942 (1178)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999988877663
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-55 Score=467.76 Aligned_cols=280 Identities=24% Similarity=0.365 Sum_probs=239.9
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcccEEEEec
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLP 80 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~l~~~p 80 (450)
||.+|+||||||||||+|++.+.++. . ..+.+.++++..++.++..++ ||+++|++.++...+... .....++.|
T Consensus 295 lg~v~vI~~DKTGTLT~Gn~~~~~~~-~--~~~~~~~~ll~~a~~~~~~s~-~P~~~AIv~~a~~~~~~~-~~~~~~~~p 369 (673)
T PRK14010 295 CGDVNVLILDKTGTITYGNRMADAFI-P--VKSSSFERLVKAAYESSIADD-TPEGRSIVKLAYKQHIDL-PQEVGEYIP 369 (673)
T ss_pred hhCCCEEEEeCCCcCCCCCeEEEEEE-e--CCCccHHHHHHHHHHhcCCCC-ChHHHHHHHHHHHcCCCc-hhhhcceec
Confidence 68999999999999999887776642 1 235567778888888876655 599999998765321110 111245689
Q ss_pred cCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcCC-hhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCCcE
Q 013069 81 FDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNK-SKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQ 159 (450)
Q Consensus 81 F~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~~-~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~~ 159 (450)
|++.+|+|++.+ +|+ .+.||+++.+++.|... ...+..+++..++++++|+|+++++.+ ++
T Consensus 370 F~~~~k~~gv~~---~g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~v~~~-------------~~ 431 (673)
T PRK14010 370 FTAETRMSGVKF---TTR--EVYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVLED-------------NE 431 (673)
T ss_pred cccccceeEEEE---CCE--EEEECCHHHHHHHhhhcCCCCchHHHHHHHHHHhCCCeEEEEEEC-------------CE
Confidence 999999999864 343 46699999999999642 223345667778899999999988643 49
Q ss_pred EEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhc
Q 013069 160 FIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKA 239 (450)
Q Consensus 160 ~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 239 (450)
++|++++.||+|++++++|++||++|++++|+||||+.+|.++|+++||.
T Consensus 432 ~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~------------------------------ 481 (673)
T PRK14010 432 ILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD------------------------------ 481 (673)
T ss_pred EEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc------------------------------
Confidence 99999999999999999999999999999999999999999999999996
Q ss_pred cceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHHHHH
Q 013069 240 DGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAI 319 (450)
Q Consensus 240 ~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~~ 319 (450)
++|++++|+||.++|+.+|++|+.|+|+|||+||+|||++|||||||++|++.|+++||+|+++++|+.|++++++||++
T Consensus 482 ~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvAkeAADiVLldd~ls~Iv~av~~gR~i 561 (673)
T PRK14010 482 RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNSGTMSAKEAANLIDLDSNPTKLMEVVLIGKQL 561 (673)
T ss_pred eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeCCCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 013069 320 FQRMRNYMVRGIDG 333 (450)
Q Consensus 320 ~~~i~~~~~~~~~~ 333 (450)
|.|+++++.|.+.+
T Consensus 562 ~~n~~~~~~f~~~~ 575 (673)
T PRK14010 562 LMTRGSLTTFSIAN 575 (673)
T ss_pred HHHHHHHHheeeec
Confidence 99999999998865
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-54 Score=458.70 Aligned_cols=279 Identities=26% Similarity=0.382 Sum_probs=240.6
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCc-h--hhhhcccEEE
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADP-K--EARADIQEVH 77 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~-~--~~~~~~~~l~ 77 (450)
||++|+||||||||||+|+|.+.+++. ..+.+.++++..++.++..++| |+++||+.++... + .....++..+
T Consensus 295 lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~a~~~s~~s~h-P~~~AIv~~a~~~~~~~~~~~~~~~~~ 370 (679)
T PRK01122 295 AGDVDTLLLDKTGTITLGNRQASEFLP---VPGVTEEELADAAQLSSLADET-PEGRSIVVLAKQRFNLRERDLQSLHAT 370 (679)
T ss_pred hcCCCEEEEeCCCCCcCCcEEEEEEEe---CCCCCHHHHHHHHHHhcCCCCC-chHHHHHHHHHhhcCCCchhhccccce
Confidence 689999999999999999999988642 2467788899999888887765 9999999887531 1 1111245678
Q ss_pred EeccCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcC-ChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCC
Q 013069 78 FLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN-KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGS 156 (450)
Q Consensus 78 ~~pF~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~-~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~ 156 (450)
++||++.++++++.+ +| ..+.||+++.+++.|.. ....++.+++.+++++++|+|++++|++.
T Consensus 371 ~~pF~s~~~~~gv~~---~g--~~~~kGa~e~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~va~~~----------- 434 (679)
T PRK01122 371 FVPFSAQTRMSGVDL---DG--REIRKGAVDAIRRYVESNGGHFPAELDAAVDEVARKGGTPLVVAEDN----------- 434 (679)
T ss_pred eEeecCcCceEEEEE---CC--EEEEECCHHHHHHHHHhcCCcChHHHHHHHHHHHhCCCcEEEEEECC-----------
Confidence 899999988887753 34 57899999999999953 23345677888899999999999999754
Q ss_pred CcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHh
Q 013069 157 PWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELI 236 (450)
Q Consensus 157 ~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 236 (450)
+++|+++++||+|++++++|++||++|++++|+|||++.+|.++|+++||+
T Consensus 435 --~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId--------------------------- 485 (679)
T PRK01122 435 --RVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD--------------------------- 485 (679)
T ss_pred --eEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc---------------------------
Confidence 999999999999999999999999999999999999999999999999995
Q ss_pred hhccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHH
Q 013069 237 EKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLIS 316 (450)
Q Consensus 237 ~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~ 316 (450)
++|++++|+||.++|+.+|++|+.|+|+|||.||+|||++|||||||++|++.|+++||+|+++++|+.|++++++|
T Consensus 486 ---~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvAkeAADiVLldd~~s~Iv~av~~G 562 (679)
T PRK01122 486 ---DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAGNMVDLDSNPTKLIEVVEIG 562 (679)
T ss_pred ---EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhCCEEEeCCCHHHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 013069 317 RAIFQRMRNYMVRGI 331 (450)
Q Consensus 317 R~~~~~i~~~~~~~~ 331 (450)
|++.-.--....|++
T Consensus 563 R~~~~tr~~~~~f~~ 577 (679)
T PRK01122 563 KQLLMTRGALTTFSI 577 (679)
T ss_pred HHHHhhhHhhhhhhH
Confidence 997633333344444
|
|
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-53 Score=440.49 Aligned_cols=356 Identities=26% Similarity=0.391 Sum_probs=287.9
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCC----------------ChHHHHHHHHHhcc---------------c
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGV----------------DADTVVLMAARASQ---------------V 49 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~----------------~~~~il~~aa~~~~---------------~ 49 (450)
||..++||+|||||||+|+|+|...|.+...... .-.++++.+..|.+ .
T Consensus 363 lGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~ 442 (1019)
T KOG0203|consen 363 LGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRD 442 (1019)
T ss_pred cccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHHHHhCcceecccccCCceeeee
Confidence 5778999999999999999999987753211101 11245555555543 2
Q ss_pred CCCChHHHHHHHhhc----CchhhhhcccEEEEeccCCCCceEEEEEEccC---CeEEEEEcCCHHHHHhhhc-------
Q 013069 50 ENLDVIDAAIVGMLA----DPKEARADIQEVHFLPFDPTGKRTALTYIDSE---GKMHRVTKGSPEQILNLLH------- 115 (450)
Q Consensus 50 ~~~~pi~~ai~~~~~----~~~~~~~~~~~l~~~pF~~~~kr~svi~~~~~---g~~~~~~KGa~~~i~~~~~------- 115 (450)
.+.|+.+.|++++.. +..+.|..++.+...||||++|..-.+....+ .+..+++||+||.++++|+
T Consensus 443 v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~ 522 (1019)
T KOG0203|consen 443 VAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGE 522 (1019)
T ss_pred ccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCC
Confidence 345788999998753 34566888899999999999999887776533 5778999999999999997
Q ss_pred ---CChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCc-----------CCCCCCcEEEEeccCCCCCCcchHHHHHHH
Q 013069 116 ---NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK-----------ESSGSPWQFIGLIPLFDPPIHDSAETIRRA 181 (450)
Q Consensus 116 ---~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~-----------~~~e~~~~~lG~i~l~D~lr~~~~~~I~~l 181 (450)
.++...+.++....++...|.|+++++++.++++++ +.+-.+|.|+|++++-||||..+++++..|
T Consensus 523 e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~C 602 (1019)
T KOG0203|consen 523 EKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKC 602 (1019)
T ss_pred CCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccccchhhccCCCcccCchhhhhh
Confidence 245667888889999999999999999999886542 234578999999999999999999999999
Q ss_pred HhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC------------CC----------ccccCCchhhhhhcCChhHHhhhc
Q 013069 182 LSLGLGVKMITGDQLAIAKETGRRLGMGTNMY------------PS----------SALSGQDRDESIVALPVDELIEKA 239 (450)
Q Consensus 182 ~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~------------~~----------~~l~~~~~~~~~~~~~~~~~~~~~ 239 (450)
+.+||+|+|+|||++.||+++|++.||..... +. .++.|.+.. .+...++++++...
T Consensus 603 rsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~-~~~~~qld~il~nh 681 (1019)
T KOG0203|consen 603 RSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELP-DMSSEQLDELLQNH 681 (1019)
T ss_pred hhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEeccccc-ccCHHHHHHHHHhC
Confidence 99999999999999999999999999754211 11 122232221 23344567777766
Q ss_pred c--ceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEec-cchHHHhhccCEEecCCCchHHHHHHHHH
Q 013069 240 D--GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLIS 316 (450)
Q Consensus 240 ~--v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~I~~~ 316 (450)
. ||||.||+||+.||+.+|++|.+|+.+|||+||+||||+|||||||| .|+|.+++|||+||++++|++|+..|++|
T Consensus 682 ~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtGVEEG 761 (1019)
T KOG0203|consen 682 QEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEG 761 (1019)
T ss_pred CceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcchhheeecccc
Confidence 5 89999999999999999999999999999999999999999999999 89999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--ccccHHHHHHH
Q 013069 317 RAIFQRMRNYMVRGIDGLSSTEFIQVLELN--FLFTLDTVIAI 357 (450)
Q Consensus 317 R~~~~~i~~~~~~~~~~~~~~i~l~~~~~~--~~~pl~~~~~l 357 (450)
|-+|+|+||.+.|.+..++.-+.-.+..++ ..+|+..+.+|
T Consensus 762 RLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL 804 (1019)
T KOG0203|consen 762 RLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTIL 804 (1019)
T ss_pred eehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhh
Confidence 999999999999999876655443333322 55778888887
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-53 Score=465.39 Aligned_cols=377 Identities=20% Similarity=0.222 Sum_probs=286.1
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCCh--------------------------------------------
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDA-------------------------------------------- 36 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~-------------------------------------------- 36 (450)
||++++|++|||||||+|.|++.+|.|....+|...
T Consensus 384 LGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 463 (1151)
T KOG0206|consen 384 LGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDI 463 (1151)
T ss_pred hcceeEEEEcCcCccccceeeeecccccCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchH
Confidence 799999999999999999999999998644332210
Q ss_pred HHHHHHHHHhccc-------------CCCChHHHHHHHhhcCchh----------------hhhcccEEEEeccCCCCce
Q 013069 37 DTVVLMAARASQV-------------ENLDVIDAAIVGMLADPKE----------------ARADIQEVHFLPFDPTGKR 87 (450)
Q Consensus 37 ~~il~~aa~~~~~-------------~~~~pi~~ai~~~~~~~~~----------------~~~~~~~l~~~pF~~~~kr 87 (450)
.+..+..+.|... ..+.|.+.|++..+.+.+- ....|++++.++|+|.|||
T Consensus 464 ~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKR 543 (1151)
T KOG0206|consen 464 LEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKR 543 (1151)
T ss_pred HHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccce
Confidence 1233333433211 1235889999887653211 2457899999999999999
Q ss_pred EEEEEEccCCeEEEEEcCCHHHHHhhhc-CChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcC--------------
Q 013069 88 TALTYIDSEGKMHRVTKGSPEQILNLLH-NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKE-------------- 152 (450)
Q Consensus 88 ~svi~~~~~g~~~~~~KGa~~~i~~~~~-~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~-------------- 152 (450)
|||++++++|+..+|||||+..|.+++. +.....++..+++++||.+|+|+||+||+.+++++++
T Consensus 544 MSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~ 623 (1151)
T KOG0206|consen 544 MSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLT 623 (1151)
T ss_pred eEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999998 5567788899999999999999999999999987643
Q ss_pred -----------CCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccC-
Q 013069 153 -----------SSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSG- 220 (450)
Q Consensus 153 -----------~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~- 220 (450)
.+|++|+++|.+++||+++++++++|+.|++||||+||+|||+.+||.+||..|++..+......+..
T Consensus 624 ~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~ 703 (1151)
T KOG0206|consen 624 DREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTE 703 (1151)
T ss_pred CHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecC
Confidence 45899999999999999999999999999999999999999999999999999998765332221111
Q ss_pred --------------------------------------------CchhhhhhcC---ChhHHhhh--ccceeecChhhHH
Q 013069 221 --------------------------------------------QDRDESIVAL---PVDELIEK--ADGFAGVFPEHKY 251 (450)
Q Consensus 221 --------------------------------------------~~~~~~~~~~---~~~~~~~~--~~v~a~~~P~~K~ 251 (450)
+.....+... .+-++... +-+|||++|.||+
T Consensus 704 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA 783 (1151)
T KOG0206|consen 704 TSEELSSLDATAALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKA 783 (1151)
T ss_pred ChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHH
Confidence 1111111110 01123333 3389999999999
Q ss_pred HHHHHHhh-cCCEEEEecCCCCChHhHhhCCeeEEec-cchHHHhhccCEEecCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 013069 252 EIVKHLQA-RNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVR 329 (450)
Q Consensus 252 ~iV~~lq~-~g~~v~~iGDG~ND~~al~~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~~~~~i~~~~~~ 329 (450)
.+|+.+++ .+.++++||||+||++|++.|||||+++ .+..+|..+||+.+.+..+..-.-++ +||+.|.|+.+.++|
T Consensus 784 ~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rLLLV-HGhW~Y~R~a~~ily 862 (1151)
T KOG0206|consen 784 LVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERLLLV-HGHWSYIRLAKMILY 862 (1151)
T ss_pred HHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhhhee-ecceeHHHHHHHHHH
Confidence 99999975 4899999999999999999999999997 57888999999999885555433333 699999999988888
Q ss_pred HHHH--------HHHHHHHHHhh--------------hcccccHHHHHHH-------HHhccCcccccchhHHHHHHH
Q 013069 330 GIDG--------LSSTEFIQVLE--------------LNFLFTLDTVIAI-------LQTAFTSKKDFGKEERELLWA 378 (450)
Q Consensus 330 ~~~~--------~~~~i~l~~~~--------------~~~~~pl~~~~~l-------~~~~~~~~~~~~~~~~~~~~~ 378 (450)
.+.- +++.+|-.+|. +++.+|...++++ ..+.++.++.+|.......|.
T Consensus 863 fFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~ 940 (1151)
T KOG0206|consen 863 FFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWK 940 (1151)
T ss_pred HHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchH
Confidence 7742 22222222222 4466777777776 555666666666555555554
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-51 Score=435.90 Aligned_cols=281 Identities=26% Similarity=0.350 Sum_probs=244.5
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhh--hhcccEEEE
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEA--RADIQEVHF 78 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~--~~~~~~l~~ 78 (450)
||++|+||||||||||+|+|++.+++. ..+.+.++++.+++.++..++| |+++|++.++...+.. ...++..++
T Consensus 296 lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~aa~~~~~s~h-P~a~Aiv~~a~~~~~~~~~~~~~~~~~ 371 (675)
T TIGR01497 296 CGDVDTLLLDKTGTITLGNRLASEFIP---AQGVDEKTLADAAQLASLADDT-PEGKSIVILAKQLGIREDDVQSLHATF 371 (675)
T ss_pred hhCCCEEEECCCCcccCCCeEEEEEEe---cCCCcHHHHHHHHHHhcCCCCC-cHHHHHHHHHHHcCCCccccccccceE
Confidence 689999999999999999999998642 2467788899999998887765 9999999876532211 112345678
Q ss_pred eccCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcC-ChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCC
Q 013069 79 LPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN-KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSP 157 (450)
Q Consensus 79 ~pF~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~-~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~ 157 (450)
.||++.++++++.+. +| ..+.||+++.+++.|.. ....+..+++.+++++++|+|++++|++.
T Consensus 372 ~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~~~~a~~G~r~l~va~~~------------ 435 (675)
T TIGR01497 372 VEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVCEDN------------ 435 (675)
T ss_pred EEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHHHHHHHHHHhCCCeEEEEEECC------------
Confidence 999999877766443 44 57899999999988853 22345667888899999999999999864
Q ss_pred cEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhh
Q 013069 158 WQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIE 237 (450)
Q Consensus 158 ~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (450)
+++|++++.||+||+++++|++|+++|++++|+|||+..+|..+|+++|+.
T Consensus 436 -~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~---------------------------- 486 (675)
T TIGR01497 436 -RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVD---------------------------- 486 (675)
T ss_pred -EEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC----------------------------
Confidence 999999999999999999999999999999999999999999999999995
Q ss_pred hccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHHH
Q 013069 238 KADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISR 317 (450)
Q Consensus 238 ~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~R 317 (450)
+++++++|++|..+|+.+|++|+.|+|+|||.||+|||++|||||||+++++.++++||+++++++|+.|++++++||
T Consensus 487 --~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~~gt~~akeaadivLldd~~s~Iv~av~~GR 564 (675)
T TIGR01497 487 --DFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSDPTKLIEVVHIGK 564 (675)
T ss_pred --EEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhCCEEECCCCHHHHHHHHHHHH
Confidence 479999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 013069 318 AIFQRMRNYMVRGID 332 (450)
Q Consensus 318 ~~~~~i~~~~~~~~~ 332 (450)
+++-+......|+++
T Consensus 565 ~~~~t~~~~~t~~~~ 579 (675)
T TIGR01497 565 QLLITRGALTTFSIA 579 (675)
T ss_pred HHHHHHHHHheeeec
Confidence 999887777777664
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-51 Score=437.03 Aligned_cols=309 Identities=30% Similarity=0.372 Sum_probs=260.1
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcccEEEEec
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLP 80 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~l~~~p 80 (450)
|+++|+++||||||||+|+|+|.++.. . .+ ++++++.+++..+..++| |+++||+.++.+.+ ......++.+|
T Consensus 402 l~~v~tvvFDKTGTLT~G~p~v~~v~~--~-~~-~e~~~L~laAalE~~S~H-PiA~AIv~~a~~~~--~~~~~~~~~i~ 474 (713)
T COG2217 402 LAKVDTVVFDKTGTLTEGKPEVTDVVA--L-DG-DEDELLALAAALEQHSEH-PLAKAIVKAAAERG--LPDVEDFEEIP 474 (713)
T ss_pred hccCCEEEEeCCCCCcCCceEEEEEec--C-CC-CHHHHHHHHHHHHhcCCC-hHHHHHHHHHHhcC--CCCccceeeec
Confidence 578999999999999999999998642 2 24 889999999999999887 99999999765432 11122233333
Q ss_pred cCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcCChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCCcEE
Q 013069 81 FDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQF 160 (450)
Q Consensus 81 F~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~~~ 160 (450)
.....+ . .+| ..+..|++..+.+.- .+... .....+.+.++|.+++.++.++ ++
T Consensus 475 ---G~Gv~~-~---v~g--~~v~vG~~~~~~~~~---~~~~~-~~~~~~~~~~~G~t~v~va~dg-------------~~ 528 (713)
T COG2217 475 ---GRGVEA-E---VDG--ERVLVGNARLLGEEG---IDLPL-LSERIEALESEGKTVVFVAVDG-------------KL 528 (713)
T ss_pred ---cCcEEE-E---ECC--EEEEEcCHHHHhhcC---CCccc-hhhhHHHHHhcCCeEEEEEECC-------------EE
Confidence 111111 1 245 567789999987632 11222 5667788899999999999987 99
Q ss_pred EEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcc
Q 013069 161 IGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240 (450)
Q Consensus 161 lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (450)
+|++++.|++|++++++|++||+.|++++|+|||+..+|.++|+++||+ +
T Consensus 529 ~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId------------------------------~ 578 (713)
T COG2217 529 VGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGID------------------------------E 578 (713)
T ss_pred EEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChH------------------------------h
Confidence 9999999999999999999999999999999999999999999999996 5
Q ss_pred ceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHHHHHH
Q 013069 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIF 320 (450)
Q Consensus 241 v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~~~ 320 (450)
+++++.|++|.++|+.||++|+.|+|||||+||+|||+.||||||||.|+|.|+++||++|+.+++..++.+|+.||+++
T Consensus 579 v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~ 658 (713)
T COG2217 579 VRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATR 658 (713)
T ss_pred heccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHhccCcccccchhHHHHHH
Q 013069 321 QRMRNYMVRGIDGLSSTEFIQVLELNFLFTLDTVIAILQTAFTSKKDFGKEERELLW 377 (450)
Q Consensus 321 ~~i~~~~~~~~~~~~~~i~l~~~~~~~~~pl~~~~~l~~~~~~~~~~~~~~~~~~~~ 377 (450)
++||+|+.|++.++...+.+.++.+ ++++.-.+.|.+++..+..++.|...|
T Consensus 659 ~~IkqNl~~A~~yn~~~iplA~~g~-----l~p~~A~~am~~SSv~VvlNaLRL~~~ 710 (713)
T COG2217 659 RIIKQNLFWAFGYNAIAIPLAAGGL-----LTPWIAALAMSGSSVLVVLNALRLLRS 710 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-----cCHHHHHHHHcccHHHHHHHHHHhhcc
Confidence 9999999999999888887776552 224444588899999999888888765
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-49 Score=417.99 Aligned_cols=336 Identities=25% Similarity=0.264 Sum_probs=278.5
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcccEEEEec
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLP 80 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~l~~~p 80 (450)
+.++++++||||||||+|++.|.++.+ .....+..+++.+++..+..+.| |+.+||+.|+.+..........+.+..
T Consensus 579 ~hkv~tVvFDKTGTLT~G~~~V~~~~~--~~~~~~~~e~l~~v~a~Es~SeH-Pig~AIv~yak~~~~~~~~~~~~~~~~ 655 (951)
T KOG0207|consen 579 AHKVKTVVFDKTGTLTEGKPTVVDFKS--LSNPISLKEALALVAAMESGSEH-PIGKAIVDYAKEKLVEPNPEGVLSFEY 655 (951)
T ss_pred HhcCCEEEEcCCCceecceEEEEEEEe--cCCcccHHHHHHHHHHHhcCCcC-chHHHHHHHHHhcccccCccccceeec
Confidence 357999999999999999999998654 33336888999999988888776 999999999875442111112223333
Q ss_pred cCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcCChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCCcEE
Q 013069 81 FDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQF 160 (450)
Q Consensus 81 F~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~~~ 160 (450)
|........+. .+|+. ++.|+.+++...- ....+.++..+++-...|..+.++++++ ++
T Consensus 656 ~pg~g~~~~~~---~~~~~--i~iGN~~~~~r~~---~~~~~~i~~~~~~~e~~g~tvv~v~vn~-------------~l 714 (951)
T KOG0207|consen 656 FPGEGIYVTVT---VDGNE--VLIGNKEWMSRNG---CSIPDDILDALTESERKGQTVVYVAVNG-------------QL 714 (951)
T ss_pred ccCCCcccceE---EeeeE--EeechHHHHHhcC---CCCchhHHHhhhhHhhcCceEEEEEECC-------------EE
Confidence 33333221122 23332 7889999987743 3345567778888889999999999998 99
Q ss_pred EEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcc
Q 013069 161 IGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240 (450)
Q Consensus 161 lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (450)
+|++.++|++|+|+..+|..||+.|++++|+||||..+|..+|+++|+. .
T Consensus 715 ~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~------------------------------~ 764 (951)
T KOG0207|consen 715 VGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID------------------------------N 764 (951)
T ss_pred EEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc------------------------------e
Confidence 9999999999999999999999999999999999999999999999986 5
Q ss_pred ceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHHHHHH
Q 013069 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIF 320 (450)
Q Consensus 241 v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~~~ 320 (450)
+|+++.|+||.++|+.+|+.++.|+|+|||+||+|||.+|||||+|+.+++.|.++|||||+.+++.+++.+|.++|+++
T Consensus 765 V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~ 844 (951)
T KOG0207|consen 765 VYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTV 844 (951)
T ss_pred EEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccc-ccHHHHHHHHHhccCcccccchhHHHHHHHHhhhhhhcCCCC
Q 013069 321 QRMRNYMVRGIDGLSSTEFIQVLELNFL-FTLDTVIAILQTAFTSKKDFGKEERELLWAHAQRTLHGLQPP 390 (450)
Q Consensus 321 ~~i~~~~~~~~~~~~~~i~l~~~~~~~~-~pl~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (450)
.|+|.|+.|++.+++.++.+.++.|+++ +-|.+..--+.|++++..+.-.+..++.|..+.-..+..+.+
T Consensus 845 ~rIk~N~~~A~~yn~~~IpIAagvF~P~~~~L~Pw~A~lama~SSvsVv~sSllLk~~k~p~~~~~~~~e~ 915 (951)
T KOG0207|consen 845 KRIKLNFVWALIYNLVGIPIAAGVFAPFGIVLPPWMASLAMAASSVSVVLSSLLLKRYKKPTINKLYRYEA 915 (951)
T ss_pred hhHHHHHHHHHHHHHhhhhhheecccCCccccCchHHHHHHHhhhHHHhhhHHHHhhccccccccceeccc
Confidence 9999999999999999999888877633 334455555899999999999888888888876433333334
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-49 Score=399.60 Aligned_cols=350 Identities=22% Similarity=0.267 Sum_probs=260.9
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCCh-HH---------------------------------HHHHHHHh
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDA-DT---------------------------------VVLMAARA 46 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~-~~---------------------------------il~~aa~~ 46 (450)
||+|+++.+|||||||+|+|.++++.+....++.+. ++ .....+.|
T Consensus 404 LGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalC 483 (1051)
T KOG0210|consen 404 LGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALC 483 (1051)
T ss_pred hcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHh
Confidence 799999999999999999999999877443322221 11 11111222
Q ss_pred ccc---C---------CCChHHHHHHHhhc-----------------CchhhhhcccEEEEeccCCCCceEEEEEEcc-C
Q 013069 47 SQV---E---------NLDVIDAAIVGMLA-----------------DPKEARADIQEVHFLPFDPTGKRTALTYIDS-E 96 (450)
Q Consensus 47 ~~~---~---------~~~pi~~ai~~~~~-----------------~~~~~~~~~~~l~~~pF~~~~kr~svi~~~~-~ 96 (450)
... . ...|.+.||+.... .+.....+|+++..+||+++.|||++++++. +
T Consensus 484 HNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~ 563 (1051)
T KOG0210|consen 484 HNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETT 563 (1051)
T ss_pred ccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCC
Confidence 211 0 01344555543221 1112234799999999999999999999985 6
Q ss_pred CeEEEEEcCCHHHHHhhhcCChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcC------------------------
Q 013069 97 GKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKE------------------------ 152 (450)
Q Consensus 97 g~~~~~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~------------------------ 152 (450)
++...|.|||+.+|...... .+++++...++|++|+|+|.+|.+.+++++++
T Consensus 564 ~evtfylKGAD~VMs~iVq~----NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv 639 (1051)
T KOG0210|consen 564 EEVTFYLKGADVVMSGIVQY----NDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVV 639 (1051)
T ss_pred ceEEEEEecchHHHhccccc----chhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHH
Confidence 89999999999998876544 45888899999999999999999999977532
Q ss_pred --CCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC----------------
Q 013069 153 --SSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP---------------- 214 (450)
Q Consensus 153 --~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~---------------- 214 (450)
..|.+++++|+.++||+++++++.+++.||++|++|||+|||+.+||..+|+..++......
T Consensus 640 ~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~e 719 (1051)
T KOG0210|consen 640 ERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNE 719 (1051)
T ss_pred HHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHH
Confidence 34799999999999999999999999999999999999999999999999999998754322
Q ss_pred ----------CccccCCchhhhhhcC--ChhHHhhh--ccceeecChhhHHHHHHHHhhc-CCEEEEecCCCCChHhHhh
Q 013069 215 ----------SSALSGQDRDESIVAL--PVDELIEK--ADGFAGVFPEHKYEIVKHLQAR-NHICGMIGNGVNDAPALKK 279 (450)
Q Consensus 215 ----------~~~l~~~~~~~~~~~~--~~~~~~~~--~~v~a~~~P~~K~~iV~~lq~~-g~~v~~iGDG~ND~~al~~ 279 (450)
..++.|....-.+... ++-++... +-++|||+|.||+++++.+|+. |..|++||||-||++|+++
T Consensus 720 L~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~ 799 (1051)
T KOG0210|consen 720 LNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQA 799 (1051)
T ss_pred HHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheee
Confidence 2233333322222211 12233333 2379999999999999999986 8999999999999999999
Q ss_pred CCeeEEe-ccchHHHhhccCEEecCCCchHHHHHHH-HHHHHHHHHHHHHHHHHH-HHHHHHHH-HHhhhcccccHHHHH
Q 013069 280 ADIGIAV-ADATDAARSAADIVLTEPGLNVIITAVL-ISRAIFQRMRNYMVRGID-GLSSTEFI-QVLELNFLFTLDTVI 355 (450)
Q Consensus 280 AdvGIa~-~~~~~~a~~aaDivl~~~~l~~i~~~I~-~~R~~~~~i~~~~~~~~~-~~~~~i~l-~~~~~~~~~pl~~~~ 355 (450)
||+||++ |+...+|.-|||+.+++ |+.+.+++. +||..|+|-.+...|-+. ++...+.- .++.++.|.|+.+.+
T Consensus 800 A~~GiGI~gkEGkQASLAADfSItq--F~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~Lyq 877 (1051)
T KOG0210|consen 800 ADVGIGIVGKEGKQASLAADFSITQ--FSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQ 877 (1051)
T ss_pred cccceeeecccccccchhccccHHH--HHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhh
Confidence 9999998 47888999999999987 888888887 599999999877666654 22222221 234444555655554
Q ss_pred H
Q 013069 356 A 356 (450)
Q Consensus 356 ~ 356 (450)
-
T Consensus 878 G 878 (1051)
T KOG0210|consen 878 G 878 (1051)
T ss_pred h
Confidence 4
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-48 Score=406.16 Aligned_cols=263 Identities=25% Similarity=0.369 Sum_probs=218.3
Q ss_pred cccEEEEeccCCCCceEEEEEEcc-CCeEEEEEcCCHHHHHhhhcCChhhHHHHHHHHHHHHHhcchhhhhhceecCCC-
Q 013069 72 DIQEVHFLPFDPTGKRTALTYIDS-EGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEG- 149 (450)
Q Consensus 72 ~~~~l~~~pF~~~~kr~svi~~~~-~g~~~~~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~- 149 (450)
.+.+++.+||+|.-+||||++.++ +.+++.|+|||||.|.+.|. .+.+++.+++.+++|+.+|+|++++|+|+++..
T Consensus 600 ~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~-p~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~ 678 (1140)
T KOG0208|consen 600 EISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICK-PETVPADYQEVLKEYTHQGFRVIALASKELETST 678 (1140)
T ss_pred ceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcC-cccCCccHHHHHHHHHhCCeEEEEEecCccCcch
Confidence 467889999999999999999874 56789999999999999995 467889999999999999999999999999866
Q ss_pred -------CcCCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCcc-----
Q 013069 150 -------SKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSA----- 217 (450)
Q Consensus 150 -------~~~~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~----- 217 (450)
.++..|++++|+|++.|++++|+.++.+|++|.+++|+++|+||||..||..+|++|||..+......
T Consensus 679 ~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~ 758 (1140)
T KOG0208|consen 679 LQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEP 758 (1140)
T ss_pred HHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccC
Confidence 36778999999999999999999999999999999999999999999999999999999753210000
Q ss_pred -------------------ccC-Cchh----------hhhh---------c-----------CChhHHhhhccceeecCh
Q 013069 218 -------------------LSG-QDRD----------ESIV---------A-----------LPVDELIEKADGFAGVFP 247 (450)
Q Consensus 218 -------------------l~~-~~~~----------~~~~---------~-----------~~~~~~~~~~~v~a~~~P 247 (450)
..+ .+.+ +.+. + .-++.++.++.+|||++|
T Consensus 759 ~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP 838 (1140)
T KOG0208|consen 759 PEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSP 838 (1140)
T ss_pred CccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCc
Confidence 000 0000 0000 0 013456778899999999
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHHHH----HHHHH
Q 013069 248 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRA----IFQRM 323 (450)
Q Consensus 248 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~----~~~~i 323 (450)
+||.++|+.||+.|+.|+|+|||+||+.|||+||+||+++++ .|.-||.+.-.-++.+++..+|++||. .|...
T Consensus 839 ~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSea--EASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~F 916 (1140)
T KOG0208|consen 839 DQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSEA--EASVAAPFTSKTPSISCVPDVIREGRAALVTSFACF 916 (1140)
T ss_pred hhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhhh--hHhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHH
Confidence 999999999999999999999999999999999999999753 467789998888899999999999998 45555
Q ss_pred HHHHHHHHHHHHHH
Q 013069 324 RNYMVRGIDGLSST 337 (450)
Q Consensus 324 ~~~~~~~~~~~~~~ 337 (450)
|...+|++..+...
T Consensus 917 kYMalYs~iqFisv 930 (1140)
T KOG0208|consen 917 KYMALYSAIQFISV 930 (1140)
T ss_pred HHHHHHHHHHHHhh
Confidence 55566666543333
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-45 Score=399.95 Aligned_cols=305 Identities=26% Similarity=0.312 Sum_probs=248.1
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcccEEEEec
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLP 80 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~l~~~p 80 (450)
|+++|++|||||||||+|+|+|.++.. ..+.++++++.+++..+..++| |+++||+.++...+ + .+|
T Consensus 433 l~~v~~v~fDKTGTLT~g~~~v~~~~~---~~~~~~~~~l~~aa~~e~~s~h-Pia~Ai~~~a~~~~-----~----~~~ 499 (741)
T PRK11033 433 LGRVTTVAFDKTGTLTEGKPQVTDIHP---ATGISESELLALAAAVEQGSTH-PLAQAIVREAQVRG-----L----AIP 499 (741)
T ss_pred hhCCCEEEEeCCCCCcCCceEEEEEEe---cCCCCHHHHHHHHHHHhcCCCC-HHHHHHHHHHHhcC-----C----CCC
Confidence 689999999999999999999998642 2356788999999888877655 99999998764321 1 146
Q ss_pred cCCCCceEEEE-EE-ccCCeEEEEEcCCHHHHHhhhcCChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCCc
Q 013069 81 FDPTGKRTALT-YI-DSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPW 158 (450)
Q Consensus 81 F~~~~kr~svi-~~-~~~g~~~~~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~ 158 (450)
|.+..+.+.-. +. ..+|+. +..|+++.+.+ +.+.+...++++..+|++++++|++.
T Consensus 500 ~~~~~~~~~g~Gv~~~~~g~~--~~ig~~~~~~~-------~~~~~~~~~~~~~~~g~~~v~va~~~------------- 557 (741)
T PRK11033 500 EAESQRALAGSGIEGQVNGER--VLICAPGKLPP-------LADAFAGQINELESAGKTVVLVLRND------------- 557 (741)
T ss_pred CCcceEEEeeEEEEEEECCEE--EEEecchhhhh-------ccHHHHHHHHHHHhCCCEEEEEEECC-------------
Confidence 66655554321 21 135543 45689998765 12334556778899999999999875
Q ss_pred EEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhh
Q 013069 159 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEK 238 (450)
Q Consensus 159 ~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (450)
+++|+++++|++|++++++|++|++.|++++|+|||+..++..+|+++||.
T Consensus 558 ~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~----------------------------- 608 (741)
T PRK11033 558 DVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID----------------------------- 608 (741)
T ss_pred EEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-----------------------------
Confidence 999999999999999999999999999999999999999999999999994
Q ss_pred ccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHHHH
Q 013069 239 ADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRA 318 (450)
Q Consensus 239 ~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~ 318 (450)
.++++.|++|..+|+.+++. +.|+|+|||+||+|||+.|||||+|+++++.++++||+++..+++..+..+|.+||+
T Consensus 609 --~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i~~sr~ 685 (741)
T PRK11033 609 --FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRA 685 (741)
T ss_pred --eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHH
Confidence 46789999999999999965 589999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHhccCcccccchhHHHHHH
Q 013069 319 IFQRMRNYMVRGIDGLSSTEFIQVLELNFLFTLDTVIAILQTAFTSKKDFGKEERELLW 377 (450)
Q Consensus 319 ~~~~i~~~~~~~~~~~~~~i~l~~~~~~~~~pl~~~~~l~~~~~~~~~~~~~~~~~~~~ 377 (450)
++++|++|+.|++.++...+.+.+.. ++| ++.-.+.+..++..+..++.|...|
T Consensus 686 ~~~~I~~nl~~a~~~n~~~i~~a~~g---~~~--~~~a~~~~~~ss~~v~~Nslrl~~~ 739 (741)
T PRK11033 686 THANIRQNITIALGLKAIFLVTTLLG---ITG--LWLAVLADSGATALVTANALRLLRK 739 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh---hhH--HHHHHHHHcChHHHHHHHHHhhccc
Confidence 99999999999988776665554322 122 2222366777777777777776654
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-44 Score=376.63 Aligned_cols=257 Identities=35% Similarity=0.528 Sum_probs=224.0
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcccEEEEec
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLP 80 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~l~~~p 80 (450)
||++|++|||||||||+|+|+|.++++. +. +.. ..||++.|++.++.. +.++..|
T Consensus 227 l~~v~~i~fDKTGTLT~~~~~v~~~~~~----~~------------~~~-s~hp~~~ai~~~~~~--------~~~~~~~ 281 (499)
T TIGR01494 227 LGKVDYICSDKTGTLTKNEMSFKKVSVL----GG------------EYL-SGHPDERALVKSAKW--------KILNVFE 281 (499)
T ss_pred ccCCcEEEeeCCCccccCceEEEEEEec----CC------------CcC-CCChHHHHHHHHhhh--------cCcceec
Confidence 6899999999999999999999987531 11 222 346999999987753 1235789
Q ss_pred cCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcCChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCCcEE
Q 013069 81 FDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQF 160 (450)
Q Consensus 81 F~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~~~ 160 (450)
|++..++|++++.+.++ .++||+++.+.+.|.. +.+..++++.+|+|++++|++. ++
T Consensus 282 f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~-------~~~~~~~~~~~g~~~~~~a~~~-------------~~ 338 (499)
T TIGR01494 282 FSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD-------LEEKVKELAQSGLRVLAVASKE-------------TL 338 (499)
T ss_pred cCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH-------HHHHHHHHHhCCCEEEEEEECC-------------eE
Confidence 99999999998875333 4789999999998742 3344557888999999999886 89
Q ss_pred EEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcc
Q 013069 161 IGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240 (450)
Q Consensus 161 lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (450)
+|++.++|++|++++++|+.|+++|++++|+|||+..+|..+|+++|+
T Consensus 339 ~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-------------------------------- 386 (499)
T TIGR01494 339 LGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI-------------------------------- 386 (499)
T ss_pred EEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc--------------------------------
Confidence 999999999999999999999999999999999999999999999987
Q ss_pred ceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHHHHHH
Q 013069 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIF 320 (450)
Q Consensus 241 v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~~~ 320 (450)
+++++|++|.++|+.+|+.|+.|+|+|||.||+||++.|||||+|+ ++++||++++++++..+..++.+||+++
T Consensus 387 -~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~ 460 (499)
T TIGR01494 387 -FARVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTF 460 (499)
T ss_pred -eeccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHH
Confidence 6889999999999999999999999999999999999999999997 6889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Q 013069 321 QRMRNYMVRGIDGLSSTEFIQVL 343 (450)
Q Consensus 321 ~~i~~~~~~~~~~~~~~i~l~~~ 343 (450)
+++++++.|++.++...+.+.+.
T Consensus 461 ~~i~~~~~~~~~~n~~~~~~a~~ 483 (499)
T TIGR01494 461 STIKSNIFWAIAYNLILIPLAAL 483 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998876666555543
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-42 Score=379.75 Aligned_cols=315 Identities=28% Similarity=0.332 Sum_probs=260.7
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcccEEEEec
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLP 80 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~l~~~p 80 (450)
|+++|++|||||||||+|+|+|.++.. ..+.++++++.+++..+..++| |+++||+.++.+.. .... ..
T Consensus 514 l~~v~~v~fDKTGTLT~g~~~v~~~~~---~~~~~~~~~l~~a~~~e~~s~h-p~a~Ai~~~~~~~~--~~~~-----~~ 582 (834)
T PRK10671 514 ASTLDTLVFDKTGTLTEGKPQVVAVKT---FNGVDEAQALRLAAALEQGSSH-PLARAILDKAGDMT--LPQV-----NG 582 (834)
T ss_pred hcCCCEEEEcCCCccccCceEEEEEEc---cCCCCHHHHHHHHHHHhCCCCC-HHHHHHHHHHhhCC--CCCc-----cc
Confidence 689999999999999999999987542 2356788899999988888776 99999998764211 0111 12
Q ss_pred cCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcCChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCCcEE
Q 013069 81 FDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQF 160 (450)
Q Consensus 81 F~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~~~ 160 (450)
|.....+ ++... .+|. .+.+|+++.+.+.... .+.+...+++++++|.++++++++. .+
T Consensus 583 ~~~~~g~-Gv~~~-~~g~--~~~~G~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~v~va~~~-------------~~ 641 (834)
T PRK10671 583 FRTLRGL-GVSGE-AEGH--ALLLGNQALLNEQQVD----TKALEAEITAQASQGATPVLLAVDG-------------KA 641 (834)
T ss_pred ceEecce-EEEEE-ECCE--EEEEeCHHHHHHcCCC----hHHHHHHHHHHHhCCCeEEEEEECC-------------EE
Confidence 2211111 12111 2453 4567999987653211 2345666778889999999999876 89
Q ss_pred EEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcc
Q 013069 161 IGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240 (450)
Q Consensus 161 lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (450)
+|++.+.|++|++++++|++|++.|++++|+|||+..++..+++++|+. +
T Consensus 642 ~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~------------------------------~ 691 (834)
T PRK10671 642 AALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID------------------------------E 691 (834)
T ss_pred EEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC------------------------------E
Confidence 9999999999999999999999999999999999999999999999995 3
Q ss_pred ceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHHHHHH
Q 013069 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIF 320 (450)
Q Consensus 241 v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~~~ 320 (450)
+|+++.|++|.++++.++.+++.|+|+|||.||++|++.||+||+|+++++.++++||++++.+++.+|..++++||+++
T Consensus 692 ~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~ 771 (834)
T PRK10671 692 VIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATL 771 (834)
T ss_pred EEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccc--ccHHHHHHHHHhccCcccccchhHHHHHH
Q 013069 321 QRMRNYMVRGIDGLSSTEFIQVLELNFL--FTLDTVIAILQTAFTSKKDFGKEERELLW 377 (450)
Q Consensus 321 ~~i~~~~~~~~~~~~~~i~l~~~~~~~~--~pl~~~~~l~~~~~~~~~~~~~~~~~~~~ 377 (450)
.+|++|+.|++.++..++.+.++.+++. +.++|+..-+.|.+++..+..++.|...|
T Consensus 772 ~~i~~Nl~~a~~yn~~~i~~a~g~~~p~~g~~l~p~~a~~~m~~ss~~vv~nslrl~~~ 830 (834)
T PRK10671 772 RNMKQNLLGAFIYNSLGIPIAAGILWPFTGTLLNPVVAGAAMALSSITVVSNANRLLRF 830 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhchhhhhhcccCHHHHHHHhcccceeehhhhHHhcCC
Confidence 9999999999999998888887655432 24667777789999999999999887644
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-42 Score=354.22 Aligned_cols=283 Identities=26% Similarity=0.346 Sum_probs=222.3
Q ss_pred ccccEEEeCcccccccCceEEEeEeeecccC---------CCChHHHHHHHHHhc--cc---CCCChHHHHHHHhhcCch
Q 013069 2 AGMDVLCCDKTGTLTLNKLTVDKNLIEIFAG---------GVDADTVVLMAARAS--QV---ENLDVIDAAIVGMLADPK 67 (450)
Q Consensus 2 g~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~---------~~~~~~il~~aa~~~--~~---~~~~pi~~ai~~~~~~~~ 67 (450)
|++|+.|||||||||+..|.|..+- .... ....+.+..+|++.+ .. --.||+++|.+..++..-
T Consensus 477 GkvdvCCFDKTGTLT~d~lvv~Gva--g~~~~~~~~~~~s~~p~~t~~vlAscHsLv~le~~lVGDPlEKA~l~~v~W~~ 554 (1160)
T KOG0209|consen 477 GKVDVCCFDKTGTLTEDDLVVEGVA--GLSADEGALTPASKAPNETVLVLASCHSLVLLEDKLVGDPLEKATLEAVGWNL 554 (1160)
T ss_pred CceeEEEecCCCccccccEEEEecc--cccCCcccccchhhCCchHHHHHHHHHHHHHhcCcccCChHHHHHHHhcCccc
Confidence 7899999999999999999998742 1110 112234444444332 22 235899999999875422
Q ss_pred hh------h----hcccEEEEeccCCCCceEEEEEEcc----CCeEEEEEcCCHHHHHhhhcCChhhHHHHHHHHHHHHH
Q 013069 68 EA------R----ADIQEVHFLPFDPTGKRTALTYIDS----EGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAE 133 (450)
Q Consensus 68 ~~------~----~~~~~l~~~pF~~~~kr~svi~~~~----~g~~~~~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~a~ 133 (450)
+. + ..+++.+.+.|.|.-|||+++.... +-+++..+|||||.|.++. .+++..+++...+|++
T Consensus 555 ~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml---~dvP~dY~~iYk~ytR 631 (1160)
T KOG0209|consen 555 EKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEML---RDVPKDYDEIYKRYTR 631 (1160)
T ss_pred ccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHH---HhCchhHHHHHHHHhh
Confidence 11 1 2467789999999999999987642 2367889999999999987 4678889999999999
Q ss_pred hcchhhhhhceecCC--------CCcCCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH
Q 013069 134 RGLRSLAVAYQEVPE--------GSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR 205 (450)
Q Consensus 134 ~Glr~l~vA~~~~~~--------~~~~~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~ 205 (450)
+|.|||+++|+.++. ..++..|+++.|.|++.+.-|+|+|++++|+.|++++++++||||||+.||.++|++
T Consensus 632 ~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~ 711 (1160)
T KOG0209|consen 632 QGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKE 711 (1160)
T ss_pred ccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehhe
Confidence 999999999999872 246788999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCcc---------------------------------------ccCCchhhhhhcCChhHHhhhccceeecC
Q 013069 206 LGMGTNMYPSSA---------------------------------------LSGQDRDESIVALPVDELIEKADGFAGVF 246 (450)
Q Consensus 206 lgi~~~~~~~~~---------------------------------------l~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 246 (450)
+||.....+... +.|...+.......+..++....+|||+.
T Consensus 712 v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARva 791 (1160)
T KOG0209|consen 712 VGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVA 791 (1160)
T ss_pred eeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeC
Confidence 999754211111 11222221122222345666677999999
Q ss_pred hhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccc
Q 013069 247 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADA 289 (450)
Q Consensus 247 P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~ 289 (450)
|.||..++..|++.|+.++|+|||.||+.|||.||||||+-++
T Consensus 792 P~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~ 834 (1160)
T KOG0209|consen 792 PKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNN 834 (1160)
T ss_pred hhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhcC
Confidence 9999999999999999999999999999999999999998543
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-40 Score=352.76 Aligned_cols=284 Identities=29% Similarity=0.386 Sum_probs=230.6
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCC--hHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhccc-EEE
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVD--ADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQ-EVH 77 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~--~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~-~l~ 77 (450)
||++|++|||||||||+|+|+|.++.. . .+.+ .++++.+++.++...+| |++.|++.++...+..... + ...
T Consensus 243 l~~v~~i~fDKTGTLT~~~~~v~~~~~--~-~~~~~~~~~~l~~a~~~e~~~~h-p~~~Ai~~~~~~~~~~~~~-~~~~~ 317 (556)
T TIGR01525 243 LAKVKTVVFDKTGTLTTGKPTVVDVEP--L-DDASISEEELLALAAALEQSSSH-PLARAIVRYAKKRGLELPK-QEDVE 317 (556)
T ss_pred hhcCCEEEEeCCCCCcCCceEEEEEEe--c-CCCCccHHHHHHHHHHHhccCCC-hHHHHHHHHHHhcCCCccc-ccCee
Confidence 689999999999999999999998653 1 2333 77888888888877665 9999999987542211100 1 112
Q ss_pred EeccCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcCChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCC
Q 013069 78 FLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSP 157 (450)
Q Consensus 78 ~~pF~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~ 157 (450)
.+| .+..... .+|. ..+..|+++++. +. ..+. ..++..+++++++|+|+++++++.
T Consensus 318 ~~~----~~gi~~~---~~g~-~~~~lg~~~~~~--~~-~~~~-~~~~~~~~~~~~~g~~~~~v~~~~------------ 373 (556)
T TIGR01525 318 EVP----GKGVEAT---VDGQ-EEVRIGNPRLLE--LA-AEPI-SASPDLLNEGESQGKTVVFVAVDG------------ 373 (556)
T ss_pred Eec----CCeEEEE---ECCe-eEEEEecHHHHh--hc-CCCc-hhhHHHHHHHhhCCcEEEEEEECC------------
Confidence 221 1122222 2342 356679998872 11 1111 223455677889999999999865
Q ss_pred cEEEEeccCCCCCCcchHHHHHHHHhCC-CeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHh
Q 013069 158 WQFIGLIPLFDPPIHDSAETIRRALSLG-LGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELI 236 (450)
Q Consensus 158 ~~~lG~i~l~D~lr~~~~~~I~~l~~~G-i~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 236 (450)
+++|.+.++|++||+++++|+.|++.| ++++|+|||+..++..+++++|+.
T Consensus 374 -~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~--------------------------- 425 (556)
T TIGR01525 374 -ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID--------------------------- 425 (556)
T ss_pred -EEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC---------------------------
Confidence 999999999999999999999999999 999999999999999999999995
Q ss_pred hhccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHH
Q 013069 237 EKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLIS 316 (450)
Q Consensus 237 ~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~ 316 (450)
++|+++.|++|..+++.++..++.|+|+|||.||++|++.||+||+++++++.+++.||+++.+++++.+..++++|
T Consensus 426 ---~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~ 502 (556)
T TIGR01525 426 ---EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLSSLPTAIDLS 502 (556)
T ss_pred ---eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999998999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013069 317 RAIFQRMRNYMVRGIDGLSSTEFIQVLE 344 (450)
Q Consensus 317 R~~~~~i~~~~~~~~~~~~~~i~l~~~~ 344 (450)
|+++++|++++.|++.++..++.+.+..
T Consensus 503 r~~~~~i~~nl~~a~~~N~~~i~~a~~g 530 (556)
T TIGR01525 503 RKTRRIIKQNLAWALGYNLVAIPLAAGG 530 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998887777766544
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-40 Score=349.27 Aligned_cols=278 Identities=31% Similarity=0.409 Sum_probs=229.2
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcccEEEEec
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLP 80 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~l~~~p 80 (450)
|+++|++|||||||||+|+|+|.++.. ..+.++++++.+++.++..++| |+++|++.++...+.....+..++.+|
T Consensus 274 l~~v~~i~fDKTGTLT~g~~~v~~i~~---~~~~~~~~~l~~aa~~e~~s~H-Pia~Ai~~~~~~~~~~~~~~~~~~~~~ 349 (562)
T TIGR01511 274 AANIDTVVFDKTGTLTQGKPTVTDVHV---FGDRDRTELLALAAALEAGSEH-PLAKAIVSYAKEKGITLVEVSDFKAIP 349 (562)
T ss_pred hhCCCEEEECCCCCCcCCCEEEEEEec---CCCCCHHHHHHHHHHHhccCCC-hHHHHHHHHHHhcCCCcCCCCCeEEEC
Confidence 689999999999999999999998542 2356788899999988888776 999999988753221111122222222
Q ss_pred cCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcCChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCCcEE
Q 013069 81 FDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQF 160 (450)
Q Consensus 81 F~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~~~ 160 (450)
.+.+... .+| ..+..|+++++.+.. ..+ .++.++|.+++.++.+. ++
T Consensus 350 ----g~Gi~~~---~~g--~~~~iG~~~~~~~~~---~~~--------~~~~~~g~~~~~~~~~~-------------~~ 396 (562)
T TIGR01511 350 ----GIGVEGT---VEG--TKIQLGNEKLLGENA---IKI--------DGKAEQGSTSVLVAVNG-------------EL 396 (562)
T ss_pred ----CceEEEE---ECC--EEEEEECHHHHHhCC---CCC--------ChhhhCCCEEEEEEECC-------------EE
Confidence 1222222 244 456789999875421 111 12457899998888765 99
Q ss_pred EEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcc
Q 013069 161 IGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240 (450)
Q Consensus 161 lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (450)
+|++.++|++||+++++|++|++.|++++|+|||+..++..+++++|+.
T Consensus 397 ~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~------------------------------- 445 (562)
T TIGR01511 397 AGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN------------------------------- 445 (562)
T ss_pred EEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-------------------------------
Confidence 9999999999999999999999999999999999999999999999993
Q ss_pred ceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHHHHHH
Q 013069 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIF 320 (450)
Q Consensus 241 v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~~~ 320 (450)
+|+++.|++|.++++.++.+++.|+|+|||.||++|++.||+||+++.+++.++++||+++.++++..+..++.+||+++
T Consensus 446 ~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~ 525 (562)
T TIGR01511 446 VRAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTL 525 (562)
T ss_pred EEccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHH
Confidence 57889999999999999999999999999999999999999999999989999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhc
Q 013069 321 QRMRNYMVRGIDGLSSTEFIQVLELN 346 (450)
Q Consensus 321 ~~i~~~~~~~~~~~~~~i~l~~~~~~ 346 (450)
++|++|+.|++.++..++.+.++.++
T Consensus 526 ~~i~qn~~~a~~~n~~~i~la~~~~~ 551 (562)
T TIGR01511 526 RRIKQNLLWAFGYNVIAIPIAAGVLY 551 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999988888777665443
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-39 Score=342.98 Aligned_cols=290 Identities=29% Similarity=0.404 Sum_probs=232.6
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcccEEEEec
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLP 80 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~l~~~p 80 (450)
||+++++|||||||||+|+|+|.++.. .+++.+++..+...+| |++.|+++++...+ .+.....+|
T Consensus 243 l~~v~~i~fDKTGTLT~~~~~v~~~~~---------~~~l~~a~~~e~~~~h-p~~~Ai~~~~~~~~----~~~~~~~~~ 308 (536)
T TIGR01512 243 LAKIKTVAFDKTGTLTTGRPKVVDVVP---------AEVLRLAAAAEQASSH-PLARAIVDYARKRE----NVESVEEVP 308 (536)
T ss_pred hcCCCEEEECCCCCCcCCceEEEEeeH---------HHHHHHHHHHhccCCC-cHHHHHHHHHHhcC----CCcceEEec
Confidence 689999999999999999999988531 3788888877776655 99999998875422 223333333
Q ss_pred cCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcCChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCCcEE
Q 013069 81 FDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQF 160 (450)
Q Consensus 81 F~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~~~ 160 (450)
. +..... .+|+ .+..|+++++.+... ..+..+|.+++.++.+. .+
T Consensus 309 g----~gi~~~---~~g~--~~~ig~~~~~~~~~~-------------~~~~~~~~~~~~v~~~~-------------~~ 353 (536)
T TIGR01512 309 G----EGVRAV---VDGG--EVRIGNPRSLEAAVG-------------ARPESAGKTIVHVARDG-------------TY 353 (536)
T ss_pred C----CeEEEE---ECCe--EEEEcCHHHHhhcCC-------------cchhhCCCeEEEEEECC-------------EE
Confidence 1 111111 2454 345799887644211 14566788888887654 99
Q ss_pred EEeccCCCCCCcchHHHHHHHHhCCC-eEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhc
Q 013069 161 IGLIPLFDPPIHDSAETIRRALSLGL-GVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKA 239 (450)
Q Consensus 161 lG~i~l~D~lr~~~~~~I~~l~~~Gi-~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 239 (450)
+|.+.++|++|++++++|++|++.|+ +++|+|||+..++..+++++|+.
T Consensus 354 ~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~------------------------------ 403 (536)
T TIGR01512 354 LGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID------------------------------ 403 (536)
T ss_pred EEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh------------------------------
Confidence 99999999999999999999999999 99999999999999999999995
Q ss_pred cceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEec-cchHHHhhccCEEecCCCchHHHHHHHHHHH
Q 013069 240 DGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRA 318 (450)
Q Consensus 240 ~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~ 318 (450)
++|+++.|++|..+++.++..++.|+|+|||.||++|++.||+||+++ ++++.++.+||+++.++++..+..++.+||+
T Consensus 404 ~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~ 483 (536)
T TIGR01512 404 EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARR 483 (536)
T ss_pred hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHH
Confidence 368899999999999999999999999999999999999999999999 7899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHhccCcccccchhHHH
Q 013069 319 IFQRMRNYMVRGIDGLSSTEFIQVLELNFLFTLDTVIAILQTAFTSKKDFGKEERE 374 (450)
Q Consensus 319 ~~~~i~~~~~~~~~~~~~~i~l~~~~~~~~~pl~~~~~l~~~~~~~~~~~~~~~~~ 374 (450)
++++|++|+.|++.++..++.+.+..+ +.++...+.|.+++..+..++.|.
T Consensus 484 ~~~~i~~nl~~a~~~n~~~i~~a~~G~-----~~p~~aa~~m~~ss~~v~~ns~r~ 534 (536)
T TIGR01512 484 TRRIVKQNVVIALGIILLLILLALFGV-----LPLWLAVLGHEGSTVLVILNALRL 534 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh-----ccHHHHHHHHcChHHHHHHHHHhh
Confidence 999999999999988777776655321 222233366666776666655543
|
. |
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-38 Score=311.63 Aligned_cols=266 Identities=27% Similarity=0.403 Sum_probs=230.1
Q ss_pred ccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhh--hhccc-EEEE
Q 013069 2 AGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEA--RADIQ-EVHF 78 (450)
Q Consensus 2 g~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~--~~~~~-~l~~ 78 (450)
|.+|++..|||||+|.|+-.-.+.+ ...|.+.+++...|..++-.... |-.+.|+..+.+.... ....+ .-.+
T Consensus 297 GDvdtliLDKTGTIT~GnR~A~~f~---p~~gv~~~~la~aa~lsSl~DeT-pEGrSIV~LA~~~~~~~~~~~~~~~~~f 372 (681)
T COG2216 297 GDVDTLLLDKTGTITLGNRQASEFI---PVPGVSEEELADAAQLASLADET-PEGRSIVELAKKLGIELREDDLQSHAEF 372 (681)
T ss_pred CCccEEEecccCceeecchhhhhee---cCCCCCHHHHHHHHHHhhhccCC-CCcccHHHHHHHhccCCCccccccccee
Confidence 6799999999999999987666643 24689999999888887766544 8888888876543211 11222 3578
Q ss_pred eccCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcCCh-hhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCC
Q 013069 79 LPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKS-KIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSP 157 (450)
Q Consensus 79 ~pF~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~~~-~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~ 157 (450)
.||+.+.++.++-. .++ ..+.||+.+.+........ ..++.++...++-++.|-++|.|+.++
T Consensus 373 vpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGTPL~V~~~~------------ 436 (681)
T COG2216 373 VPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVVENG------------ 436 (681)
T ss_pred eecceecccccccC--CCC--ceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCceEEEECC------------
Confidence 99998876655443 233 5678999999999887443 478899999999999999999999877
Q ss_pred cEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhh
Q 013069 158 WQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIE 237 (450)
Q Consensus 158 ~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (450)
+++|++.+.|-++++.+|-+.+||+.|++.+|+||||+.||..+|++.|++
T Consensus 437 -~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVD---------------------------- 487 (681)
T COG2216 437 -RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD---------------------------- 487 (681)
T ss_pred -EEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCch----------------------------
Confidence 999999999999999999999999999999999999999999999999996
Q ss_pred hccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHHH
Q 013069 238 KADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISR 317 (450)
Q Consensus 238 ~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~R 317 (450)
+..++++||+|.++|+.-|.+|+.|+|+|||.||+|||.+||||+||.+|+.+||++++.|=++++...+.+.+..|+
T Consensus 488 --dfiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMNsGTqAAkEAaNMVDLDS~PTKlievV~IGK 565 (681)
T COG2216 488 --DFIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSNPTKLIEVVEIGK 565 (681)
T ss_pred --hhhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhccccHHHHHhhcccccCCCccceehHhhhhh
Confidence 467999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred H
Q 013069 318 A 318 (450)
Q Consensus 318 ~ 318 (450)
+
T Consensus 566 q 566 (681)
T COG2216 566 Q 566 (681)
T ss_pred h
Confidence 8
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.4e-29 Score=233.08 Aligned_cols=211 Identities=32% Similarity=0.424 Sum_probs=157.7
Q ss_pred ccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcccEEEEeccCC
Q 013069 4 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDP 83 (450)
Q Consensus 4 i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~l~~~pF~~ 83 (450)
|++||||||||||+|+|.+ . . .+...++.++...+..++| |++.++..+....... ..... +.++
T Consensus 1 i~~i~fDktGTLt~~~~~v-~-----~---~~~~~~~~~~~~~~~~s~~-p~~~~~~~~~~~~~~~-~~~~~--~~~~-- 65 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV-A-----P---PSNEAALAIAAALEQGSEH-PIGKAIVEFAKNHQWS-KSLES--FSEF-- 65 (215)
T ss_dssp ESEEEEECCTTTBESHHEE-E-----S---CSHHHHHHHHHHHHCTSTS-HHHHHHHHHHHHHHHH-SCCEE--EEEE--
T ss_pred CeEEEEecCCCcccCeEEE-E-----e---ccHHHHHHHHHHhhhcCCC-cchhhhhhhhhhccch-hhhhh--heee--
Confidence 6899999999999999999 1 1 5677888888877777776 9999999876532211 11111 1111
Q ss_pred CCceEEEEEEccCCeEEEEEcCCHHHHHhhhcCChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCCcEEEEe
Q 013069 84 TGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGL 163 (450)
Q Consensus 84 ~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~ 163 (450)
..++..... ++. +. |+++++....... .............|...+.++++ +.++|.
T Consensus 66 -~~~~~~~~~--~~~---~~-g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 121 (215)
T PF00702_consen 66 -IGRGISGDV--DGI---YL-GSPEWIHELGIRV----ISPDLVEEIQESQGRTVIVLAVN-------------LIFLGL 121 (215)
T ss_dssp -TTTEEEEEE--HCH---EE-HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHCEEEEES-------------HEEEEE
T ss_pred -eeccccccc--ccc---cc-ccchhhhhccccc----cccchhhhHHHhhCCcccceeec-------------CeEEEE
Confidence 111111111 122 23 8888887755321 11222233345666666666653 499999
Q ss_pred ccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcccee
Q 013069 164 IPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 243 (450)
Q Consensus 164 i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a 243 (450)
+.+.|++|++++++|+.|+++|++++|+|||+..++..+++++||... .+|+
T Consensus 122 ~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~----------------------------~v~a 173 (215)
T PF00702_consen 122 FGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDS----------------------------IVFA 173 (215)
T ss_dssp EEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSE----------------------------EEEE
T ss_pred EeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccccc----------------------------cccc
Confidence 999999999999999999999999999999999999999999999521 2799
Q ss_pred ec--ChhhH--HHHHHHHhhcCCEEEEecCCCCChHhHhhCC
Q 013069 244 GV--FPEHK--YEIVKHLQARNHICGMIGNGVNDAPALKKAD 281 (450)
Q Consensus 244 ~~--~P~~K--~~iV~~lq~~g~~v~~iGDG~ND~~al~~Ad 281 (450)
++ +|++| ..+++.|+..++.|+|+|||.||++|+++||
T Consensus 174 ~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 174 RVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp SHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99 99999 9999999977779999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.1e-15 Score=127.98 Aligned_cols=116 Identities=28% Similarity=0.416 Sum_probs=107.2
Q ss_pred EEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhh
Q 013069 159 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEK 238 (450)
Q Consensus 159 ~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (450)
...+.++---++-++++++|++|++. ++|++.|||..-+....|..+||+..
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 67888888899999999999999999 99999999999999999999999743
Q ss_pred ccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEe-c--cchHHHhhccCEEecC
Q 013069 239 ADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV-A--DATDAARSAADIVLTE 303 (450)
Q Consensus 239 ~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~-~--~~~~~a~~aaDivl~~ 303 (450)
.+|+...|+.|..+++.|+.+++.|.|+|||+||.+||+.||+||+. + +.+..+.++||+++.+
T Consensus 72 -rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~ 138 (152)
T COG4087 72 -RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE 138 (152)
T ss_pred -eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh
Confidence 47999999999999999999999999999999999999999999986 3 5778888999999976
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=4.2e-11 Score=119.34 Aligned_cols=131 Identities=19% Similarity=0.241 Sum_probs=100.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccce-eecCh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF-AGVFP 247 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~-a~~~P 247 (450)
++.|++.+.|+.|++.|+++.++||.....+..+.+++|+.....+...+...... ..+. .-+..
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~lt--------------g~v~g~iv~~ 246 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLT--------------GNVLGDIVDA 246 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEE--------------eEecCccCCc
Confidence 58999999999999999999999999988888999999985211000000000000 0000 01234
Q ss_pred hhHHHHHHHHhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 248 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 248 ~~K~~iV~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
..|.++++.+.++ ...|+|+|||.||.+|++.|++|||+ ++.+.+++.||.++..+++.+++.++-
T Consensus 247 k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 247 QYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred ccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 6788888887654 35799999999999999999999999 899999999999999999999987764
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=5.8e-11 Score=112.73 Aligned_cols=151 Identities=26% Similarity=0.330 Sum_probs=105.1
Q ss_pred ccCCCC-CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--CCccc-c---CC-----chhh------
Q 013069 164 IPLFDP-PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSAL-S---GQ-----DRDE------ 225 (450)
Q Consensus 164 i~l~D~-lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~--~~~~l-~---~~-----~~~~------ 225 (450)
+.-.|. +.+.+.++|++|++.|+++++.||+....+..+.+.+|+....+ ++..+ . +. ..+.
T Consensus 14 Ll~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~ 93 (230)
T PRK01158 14 ITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYS 93 (230)
T ss_pred cCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHH
Confidence 333344 67899999999999999999999999999999999999864221 11111 0 00 0000
Q ss_pred hh--------------------------hcCC---hhHHhhhcc---------ceeecChh--hHHHHHHHHhhc----C
Q 013069 226 SI--------------------------VALP---VDELIEKAD---------GFAGVFPE--HKYEIVKHLQAR----N 261 (450)
Q Consensus 226 ~~--------------------------~~~~---~~~~~~~~~---------v~a~~~P~--~K~~iV~~lq~~----g 261 (450)
.. ...+ ..+.++... .+.++.|. .|...++.+.+. .
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~ 173 (230)
T PRK01158 94 ELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDP 173 (230)
T ss_pred HHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCH
Confidence 00 0000 001111110 01233333 388888777654 2
Q ss_pred CEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 262 HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 262 ~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
..++++||+.||.+|++.|++|+||+|+.+.+++.||+|+.+++-.++.++|.
T Consensus 174 ~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 174 EEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred HHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 45999999999999999999999999999999999999999999999998886
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.20 E-value=9e-11 Score=109.66 Aligned_cols=131 Identities=16% Similarity=0.148 Sum_probs=97.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
+++|++.+.|+.+++.| ++.++||-....+..+++.+|+.....+...+.+.+. + .......++
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~---~------------tG~~~~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDR---V------------VGYQLRQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCe---e------------ECeeecCcc
Confidence 47999999999999975 9999999999999999999999632111111110000 0 000114578
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLIS 316 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~ 316 (450)
+|..+++.+++.+..+.|+|||.||.+|++.||+||++. +.+..+++||=.-.-.+.+.+..++.++
T Consensus 132 ~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~-ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEec-CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 899999999888888999999999999999999999995 5556666665544455677788777765
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=9.7e-11 Score=114.06 Aligned_cols=66 Identities=23% Similarity=0.240 Sum_probs=58.8
Q ss_pred hHHHHHHHHhhc-C---CEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 249 HKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 249 ~K~~iV~~lq~~-g---~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
+|+..++.|.+. | ..|+++|||.||.+||+.|++|+||+||.+.+|++||+|+.+++-.++.++|+
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHH
Confidence 577777777654 2 45999999999999999999999999999999999999999999999998886
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.8e-10 Score=111.80 Aligned_cols=154 Identities=19% Similarity=0.196 Sum_probs=108.1
Q ss_pred EeccCCCC-CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--CCc-------cccCCchh-------
Q 013069 162 GLIPLFDP-PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSS-------ALSGQDRD------- 224 (450)
Q Consensus 162 G~i~l~D~-lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~--~~~-------~l~~~~~~------- 224 (450)
|.+.-.+. +.+.++++|+++++.|+++.++||++...+..+.+.+++....+ ++. .+.....+
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 44444444 88999999999999999999999999999999999999975111 000 00000000
Q ss_pred -------------------------h---------------------hhh-------c---CChhHHh---h-h----cc
Q 013069 225 -------------------------E---------------------SIV-------A---LPVDELI---E-K----AD 240 (450)
Q Consensus 225 -------------------------~---------------------~~~-------~---~~~~~~~---~-~----~~ 240 (450)
. ... . ....+.. . . ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 0 000 0 0000110 0 0 00
Q ss_pred c-------eeecCh--hhHHHHHHHHhhc-CC---EEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCch
Q 013069 241 G-------FAGVFP--EHKYEIVKHLQAR-NH---ICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLN 307 (450)
Q Consensus 241 v-------~a~~~P--~~K~~iV~~lq~~-g~---~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~ 307 (450)
. +.++.| .+|+..++.+.+. |- .|+++||+.||.+||+.|+.||||+|+.+.+++.||++...++-+
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~ 251 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDED 251 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccch
Confidence 1 123333 3699888888774 43 499999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 013069 308 VIITAVLI 315 (450)
Q Consensus 308 ~i~~~I~~ 315 (450)
+|.++|+.
T Consensus 252 Gv~~~l~~ 259 (264)
T COG0561 252 GVAEALEK 259 (264)
T ss_pred HHHHHHHH
Confidence 99998874
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.6e-10 Score=108.87 Aligned_cols=145 Identities=21% Similarity=0.266 Sum_probs=101.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--CCccccCC-c-------hhhh------------
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSALSGQ-D-------RDES------------ 226 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~--~~~~l~~~-~-------~~~~------------ 226 (450)
.+.+.+.++|++|++.|+++++.||+....+..+.+.+++....+ ++..+... . ....
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 478899999999999999999999999999999999999864211 11111100 0 0000
Q ss_pred --hh-cC------------C---hhHHhhhcc-------ceeecCh--hhHHHHHHHHhhc-C---CEEEEecCCCCChH
Q 013069 227 --IV-AL------------P---VDELIEKAD-------GFAGVFP--EHKYEIVKHLQAR-N---HICGMIGNGVNDAP 275 (450)
Q Consensus 227 --~~-~~------------~---~~~~~~~~~-------v~a~~~P--~~K~~iV~~lq~~-g---~~v~~iGDG~ND~~ 275 (450)
.. .. . ....+.... .+..+.| ..|...++.+.+. | ..++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 00 00 0 001111111 1123333 4788888887664 2 35999999999999
Q ss_pred hHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHH
Q 013069 276 ALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAV 313 (450)
Q Consensus 276 al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I 313 (450)
|++.|++|++|+|+.+.+++.||+|+..++-.+|.++|
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEVL 215 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhhC
Confidence 99999999999999999999999999988888887653
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.5e-10 Score=111.43 Aligned_cols=146 Identities=15% Similarity=0.184 Sum_probs=102.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--CCcccc---CC----------------------
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSALS---GQ---------------------- 221 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~--~~~~l~---~~---------------------- 221 (450)
.+.+.++++|++|++.|+++++.||++...+..+.+++|+....+ ++..+. +.
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 98 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWDT 98 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhhc
Confidence 488899999999999999999999999999999999999864211 111110 00
Q ss_pred ----------------chhhh-----h----------hcC---C------------hhHH---hhh-----cc------c
Q 013069 222 ----------------DRDES-----I----------VAL---P------------VDEL---IEK-----AD------G 241 (450)
Q Consensus 222 ----------------~~~~~-----~----------~~~---~------------~~~~---~~~-----~~------v 241 (450)
..... . ... . ..++ +.. .. .
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~ 178 (272)
T PRK15126 99 RASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSATD 178 (272)
T ss_pred CcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 00000 0 000 0 0000 000 00 0
Q ss_pred eeecChh--hHHHHHHHHhhc-C---CEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCE--EecCCCchHHHHHH
Q 013069 242 FAGVFPE--HKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADI--VLTEPGLNVIITAV 313 (450)
Q Consensus 242 ~a~~~P~--~K~~iV~~lq~~-g---~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDi--vl~~~~l~~i~~~I 313 (450)
+.+++|. .|+.-++.|.+. | ..|+++|||.||.+||+.|+.||||+|+.+.+|++||+ |+.+++-+++..+|
T Consensus 179 ~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l 258 (272)
T PRK15126 179 CLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYL 258 (272)
T ss_pred EEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHH
Confidence 1233343 588888888665 2 45999999999999999999999999999999999986 77788899999888
Q ss_pred H
Q 013069 314 L 314 (450)
Q Consensus 314 ~ 314 (450)
+
T Consensus 259 ~ 259 (272)
T PRK15126 259 T 259 (272)
T ss_pred H
Confidence 6
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=4.5e-10 Score=109.19 Aligned_cols=66 Identities=18% Similarity=0.241 Sum_probs=57.7
Q ss_pred hHHHHHHHHhhc-C---CEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccC--EEecCCCchHHHHHHH
Q 013069 249 HKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAAD--IVLTEPGLNVIITAVL 314 (450)
Q Consensus 249 ~K~~iV~~lq~~-g---~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaD--ivl~~~~l~~i~~~I~ 314 (450)
+|...++.+.+. | ..|+++||+.||.+||+.|+.|+||+||.+.+|+.|| .|+.+++-+++.++|+
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 588877777654 2 4599999999999999999999999999999999988 7888888999998886
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.09 E-value=5e-10 Score=105.87 Aligned_cols=146 Identities=23% Similarity=0.286 Sum_probs=101.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--CCccc-cCCc--------hhhh-----------
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSAL-SGQD--------RDES----------- 226 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~--~~~~l-~~~~--------~~~~----------- 226 (450)
.+.+.+.++|+++++.|+.+++.||++...+..+.+.+|+....+ +...+ .... ....
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 377889999999999999999999999999999999999653211 11111 0000 0000
Q ss_pred -hh----c-------------CC---hhHHhhhcc---------ceeecCh--hhHHHHHHHHhhc-C---CEEEEecCC
Q 013069 227 -IV----A-------------LP---VDELIEKAD---------GFAGVFP--EHKYEIVKHLQAR-N---HICGMIGNG 270 (450)
Q Consensus 227 -~~----~-------------~~---~~~~~~~~~---------v~a~~~P--~~K~~iV~~lq~~-g---~~v~~iGDG 270 (450)
.. . .+ ...+.+... .+..+.| .+|...++.+.+. | ..|+++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 00 0 00 001111111 1223333 3688888887654 2 459999999
Q ss_pred CCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchH----HHHHHH
Q 013069 271 VNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV----IITAVL 314 (450)
Q Consensus 271 ~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~----i~~~I~ 314 (450)
.||.+|++.|++|+||+|+.+.+++.||+|..+++-.+ +..+++
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999999999999999998888888 665554
|
catalyze the same reaction as SPP. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.07 E-value=6e-10 Score=100.88 Aligned_cols=104 Identities=18% Similarity=0.251 Sum_probs=82.5
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecC--hhhHHHH
Q 013069 176 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF--PEHKYEI 253 (450)
Q Consensus 176 ~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~--P~~K~~i 253 (450)
..|+.|++.|+++.++|+.+...+....+.+|+.. .|.... |+--..+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~------------------------------~f~~~kpkp~~~~~~ 90 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR------------------------------FHEGIKKKTEPYAQM 90 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE------------------------------EEecCCCCHHHHHHH
Confidence 46999999999999999999999999999999951 222222 2233334
Q ss_pred HHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHH
Q 013069 254 VKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVI 309 (450)
Q Consensus 254 V~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i 309 (450)
++.+.-....|+++||+.||.+|++.|+++++|+++.+.++..|++|+..++-.++
T Consensus 91 ~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~~~g~ 146 (169)
T TIGR02726 91 LEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARGGHGA 146 (169)
T ss_pred HHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCCCCCH
Confidence 44443334569999999999999999999999999999999999999876665543
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.06 E-value=8e-10 Score=104.15 Aligned_cols=129 Identities=21% Similarity=0.266 Sum_probs=93.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceee-cCh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG-VFP 247 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~-~~P 247 (450)
++++++.+.|+.|++.|++++++||.....+..+.+.+|+..- +...+..... .+. ..+... ..+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~-~~~~~~~~~~---~~~----------~~~~~~~~~~ 150 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAA-FANRLEVEDG---KLT----------GLVEGPIVDA 150 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce-EeeEEEEECC---EEE----------EEecCcccCC
Confidence 5899999999999999999999999999999999999998631 1100000000 000 000001 123
Q ss_pred hhHHHHHHHHhhcC----CEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHH
Q 013069 248 EHKYEIVKHLQARN----HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITA 312 (450)
Q Consensus 248 ~~K~~iV~~lq~~g----~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~ 312 (450)
..|..+++.+.++. ..|+++||+.||.+|++.|+++++++ +.+.++++||+++.++++..+..+
T Consensus 151 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 151 SYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 34777777665442 35999999999999999999999985 567888999999999998887654
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.2e-09 Score=97.71 Aligned_cols=118 Identities=25% Similarity=0.300 Sum_probs=89.3
Q ss_pred EEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhh
Q 013069 159 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEK 238 (450)
Q Consensus 159 ~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (450)
++++.+.+.|. .+|+.|++.|+++.++||+....+..+.+.+|+..
T Consensus 24 ~~~~~~~~~~~------~~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~---------------------------- 69 (154)
T TIGR01670 24 EEIKAFNVRDG------YGIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH---------------------------- 69 (154)
T ss_pred cEEEEEechhH------HHHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE----------------------------
Confidence 44555444433 28999999999999999999999999999999852
Q ss_pred ccceeecChhhHHHHHHHHhh----cCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchH-HHHHH
Q 013069 239 ADGFAGVFPEHKYEIVKHLQA----RNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV-IITAV 313 (450)
Q Consensus 239 ~~v~a~~~P~~K~~iV~~lq~----~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~-i~~~I 313 (450)
.|... ..|.+.++.+.+ ....|+|+||+.||.+|++.|++++++.++.+..+..+|+++..+.-.+ +.+++
T Consensus 70 --~~~~~--~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~ 145 (154)
T TIGR01670 70 --LYQGQ--SNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVC 145 (154)
T ss_pred --EEecc--cchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHH
Confidence 12211 234555544433 3456999999999999999999999999998999999999998776444 44444
Q ss_pred H
Q 013069 314 L 314 (450)
Q Consensus 314 ~ 314 (450)
+
T Consensus 146 ~ 146 (154)
T TIGR01670 146 E 146 (154)
T ss_pred H
Confidence 3
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.4e-09 Score=103.46 Aligned_cols=146 Identities=19% Similarity=0.237 Sum_probs=102.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--CCccc-cC------------------------
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSAL-SG------------------------ 220 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~--~~~~l-~~------------------------ 220 (450)
..+.+.+.++|+++++.|+++++.||+....+..+...+++....+ ++..+ ..
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 4477999999999999999999999999999999999999863111 11111 00
Q ss_pred ----------------Cc-hhhh-------------------hhcCC------------hh----HHhhhc---------
Q 013069 221 ----------------QD-RDES-------------------IVALP------------VD----ELIEKA--------- 239 (450)
Q Consensus 221 ----------------~~-~~~~-------------------~~~~~------------~~----~~~~~~--------- 239 (450)
.. .... ..... .. .+-+..
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEe
Confidence 00 0000 00000 00 000010
Q ss_pred -cceeecCh--hhHHHHHHHHhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHH
Q 013069 240 -DGFAGVFP--EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITA 312 (450)
Q Consensus 240 -~v~a~~~P--~~K~~iV~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~ 312 (450)
..+-.++| ..|+..++.|.+. ...++++||+.||.+||+.|+.|+||+++++.++..||+++...+-.+|+++
T Consensus 174 ~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~~ 253 (254)
T PF08282_consen 174 SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAKA 253 (254)
T ss_dssp ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHHH
T ss_pred cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHHh
Confidence 01223344 4699988888753 3579999999999999999999999999999999999999998887998876
Q ss_pred H
Q 013069 313 V 313 (450)
Q Consensus 313 I 313 (450)
|
T Consensus 254 i 254 (254)
T PF08282_consen 254 I 254 (254)
T ss_dssp H
T ss_pred C
Confidence 5
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.03 E-value=2.2e-09 Score=114.46 Aligned_cols=66 Identities=24% Similarity=0.338 Sum_probs=57.8
Q ss_pred hHHHHHHHHhhc-C---CEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 249 HKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 249 ~K~~iV~~lq~~-g---~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
+|+.-++.|.+. | ..|+++|||.||.+||+.|++||||+||.+.+|+.||+|+.+++-++|..+|.
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 466666666554 2 35999999999999999999999999999999999999999999999998886
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.7e-09 Score=103.77 Aligned_cols=66 Identities=23% Similarity=0.333 Sum_probs=57.5
Q ss_pred hHHHHHHHHhhc-C---CEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 249 HKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 249 ~K~~iV~~lq~~-g---~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
.|...++.+.+. | ..|+++||+.||.+|++.|++|++|+++.+.++..||+|+.+++-.+|..+|+
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 577767666543 2 35999999999999999999999999999999999999999999999998886
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.93 E-value=3.7e-09 Score=99.40 Aligned_cols=119 Identities=20% Similarity=0.198 Sum_probs=86.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcccee-ecC
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA-GVF 246 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a-~~~ 246 (450)
.+++|++.+.++.++++|.+|+++||-...-+..+++++|+....-+.......... -.+.. .+.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~lt--------------G~v~g~~~~ 141 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLT--------------GRVVGPICD 141 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEe--------------ceeeeeecC
Confidence 568999999999999999999999999999999999999997432211111100000 01222 344
Q ss_pred hhhHHHHHHHHhhc-CC---EEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEe
Q 013069 247 PEHKYEIVKHLQAR-NH---ICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVL 301 (450)
Q Consensus 247 P~~K~~iV~~lq~~-g~---~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl 301 (450)
.+.|...++.+.+. |. .+.++|||.||.|||+.|+.+|++. +.+..+..|+...
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n-~~~~l~~~a~~~~ 199 (212)
T COG0560 142 GEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN-PKPKLRALADVRI 199 (212)
T ss_pred cchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC-cCHHHHHHHHHhc
Confidence 57898888776654 43 5999999999999999999999995 3444555555444
|
|
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=98.91 E-value=2.6e-09 Score=86.71 Aligned_cols=64 Identities=30% Similarity=0.383 Sum_probs=53.3
Q ss_pred CCChHHHHHHHhhcCc------hhhhhcccEEEEeccCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhc
Q 013069 51 NLDVIDAAIVGMLADP------KEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLH 115 (450)
Q Consensus 51 ~~~pi~~ai~~~~~~~------~~~~~~~~~l~~~pF~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~ 115 (450)
..+|.|.||+.++... ...+..+++++.+||+|.+|||+++++ .++.+++++|||||.|+++|+
T Consensus 20 ~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct 89 (91)
T PF13246_consen 20 IGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCT 89 (91)
T ss_pred cCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcC
Confidence 3468999999887543 345678999999999999999999998 334567799999999999996
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.3e-08 Score=98.58 Aligned_cols=66 Identities=18% Similarity=0.207 Sum_probs=55.1
Q ss_pred hHHHHHHHHhhc------CCEEEEecCCCCChHhHhhCCeeEEeccch---HHHhhc--c-CEEecCCCchHHHHHHH
Q 013069 249 HKYEIVKHLQAR------NHICGMIGNGVNDAPALKKADIGIAVADAT---DAARSA--A-DIVLTEPGLNVIITAVL 314 (450)
Q Consensus 249 ~K~~iV~~lq~~------g~~v~~iGDG~ND~~al~~AdvGIa~~~~~---~~a~~a--a-Divl~~~~l~~i~~~I~ 314 (450)
.|...++.+.+. ...|+++||+.||.+||+.|++||||+|+. +.+++. | ++|..+++-++|.++++
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 577777666543 456999999999999999999999999987 478876 4 58888999999998886
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.89 E-value=8.2e-09 Score=99.78 Aligned_cols=65 Identities=23% Similarity=0.292 Sum_probs=57.5
Q ss_pred hHHHHHHHHhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHH
Q 013069 249 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAV 313 (450)
Q Consensus 249 ~K~~iV~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I 313 (450)
+|...++.+.+. ...++++||+.||.+|++.|++|++|+++.+.++..||+++.+++-.+|..+|
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhhC
Confidence 588888888765 24599999999999999999999999999999999999999998888887653
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.88 E-value=5.8e-09 Score=90.79 Aligned_cols=114 Identities=24% Similarity=0.395 Sum_probs=93.2
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhhHHHHHHH
Q 013069 177 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKH 256 (450)
Q Consensus 177 ~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~ 256 (450)
.|+.|.++|+++.++||++...+..-++.+||. .+|-. -++|....+.
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~------------------------------~~~qG--~~dK~~a~~~ 90 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIK------------------------------HLYQG--ISDKLAAFEE 90 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCc------------------------------eeeec--hHhHHHHHHH
Confidence 499999999999999999999999999999995 22322 3567777766
Q ss_pred Hhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCc----hHHHHHHHHHHHHHHH
Q 013069 257 LQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGL----NVIITAVLISRAIFQR 322 (450)
Q Consensus 257 lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l----~~i~~~I~~~R~~~~~ 322 (450)
|..+ ...|+++||..||.|+|+.+++++|+.++.+..++.||+|+...+- ..+.++|..++..++-
T Consensus 91 L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~ 164 (170)
T COG1778 91 LLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDE 164 (170)
T ss_pred HHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHH
Confidence 6554 3459999999999999999999999999999999999999987663 4456666666655443
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.4e-08 Score=93.33 Aligned_cols=111 Identities=24% Similarity=0.325 Sum_probs=85.4
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhhHHHHHH
Q 013069 176 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVK 255 (450)
Q Consensus 176 ~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~ 255 (450)
.+|+.|++.|+++.++||.....+..+++.+|+.. +|. ..+.|...++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~------------------------------~f~--g~~~k~~~l~ 102 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH------------------------------LYQ--GQSNKLIAFS 102 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce------------------------------eec--CCCcHHHHHH
Confidence 68999999999999999999999999999999851 122 1234555555
Q ss_pred HHhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCc----hHHHHHHHHHHH
Q 013069 256 HLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGL----NVIITAVLISRA 318 (450)
Q Consensus 256 ~lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l----~~i~~~I~~~R~ 318 (450)
.+.+. ...|+||||+.||.+|++.|+++++++++.+..+..+|+++..++- ..+.+.|...|.
T Consensus 103 ~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~~ 173 (183)
T PRK09484 103 DLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQG 173 (183)
T ss_pred HHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhcC
Confidence 54332 3469999999999999999999999988888889999999975443 344445544443
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.76 E-value=5.4e-08 Score=95.06 Aligned_cols=67 Identities=21% Similarity=0.165 Sum_probs=54.2
Q ss_pred hhHHHHHHHHhh-------cCCEEEEecCCCCChHhHhhCCeeEEeccch-H--H---HhhccCEEecCCCchHHHHHHH
Q 013069 248 EHKYEIVKHLQA-------RNHICGMIGNGVNDAPALKKADIGIAVADAT-D--A---ARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 248 ~~K~~iV~~lq~-------~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~-~--~---a~~aaDivl~~~~l~~i~~~I~ 314 (450)
.+|+..++.|.+ ....|+++||+.||.+||+.|++||||+++. + . .+..+|+++...+-+++.++++
T Consensus 186 ~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~ 265 (271)
T PRK03669 186 AGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLD 265 (271)
T ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHH
Confidence 358777777654 3356999999999999999999999999544 2 1 3457899999999999998887
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=7.6e-08 Score=89.61 Aligned_cols=128 Identities=20% Similarity=0.230 Sum_probs=89.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.|++.++++.|++. +++.++|+.....+..+.+.+|+.....+......... + ..+....|+
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~---i------------~~~~~~~p~ 131 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGM---I------------TGYDLRQPD 131 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCe---E------------ECccccccc
Confidence 3689999999999999 99999999999999999999998521100000000000 0 000112467
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCE-EecCCCchHHHHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADI-VLTEPGLNVIITAVL 314 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDi-vl~~~~l~~i~~~I~ 314 (450)
.|..+++.++..+..++|+|||.||.+|.+.|++|+.++.........++. ++ +++..+...+.
T Consensus 132 ~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l~ 196 (205)
T PRK13582 132 GKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAID 196 (205)
T ss_pred hHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHHH
Confidence 888899988888899999999999999999999999886543333444554 43 34665555444
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.2e-07 Score=92.64 Aligned_cols=66 Identities=24% Similarity=0.327 Sum_probs=55.5
Q ss_pred hHHHHHHHHhh----cC-CEEEEecCCCCChHhHhhCCeeEEeccchHHHh----hcc-CEEe--cCCCchHHHHHHH
Q 013069 249 HKYEIVKHLQA----RN-HICGMIGNGVNDAPALKKADIGIAVADATDAAR----SAA-DIVL--TEPGLNVIITAVL 314 (450)
Q Consensus 249 ~K~~iV~~lq~----~g-~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~----~aa-Divl--~~~~l~~i~~~I~ 314 (450)
.|...++.+.+ .. ..|+++||+.||.+|++.|++|++|+||.+.++ .+| +.+. ..++-.++.++|.
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 67777766654 35 789999999999999999999999999999999 666 6777 5677889988886
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.72 E-value=5.9e-08 Score=89.77 Aligned_cols=117 Identities=25% Similarity=0.335 Sum_probs=82.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++++++.+.|+.|++.|+++.++|+-....+..+.+.+|+.. .+...+...... .. .-..+....|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~-~~~~~~~~~~~g--~~----------~p~~~~~~~~~ 146 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDY-VYSNELVFDEKG--FI----------QPDGIVRVTFD 146 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCe-EEEEEEEEcCCC--eE----------ecceeeEEccc
Confidence 479999999999999999999999999999999999999752 111111110000 00 00112224456
Q ss_pred hHHHHHHHHhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccC
Q 013069 249 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAAD 298 (450)
Q Consensus 249 ~K~~iV~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaD 298 (450)
.|..+++.+.+. ...++|+||+.||.+|++.||++++++......+.++|
T Consensus 147 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred cHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 787777766543 34599999999999999999999999765555666655
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.60 E-value=8.6e-08 Score=86.31 Aligned_cols=108 Identities=19% Similarity=0.228 Sum_probs=77.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccc-cCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL-SGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
+-|++++.++.|++.|.+|+++||.-...+..++.+|||+........+ .+.... .. ..... -.-+...
T Consensus 89 lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk-~~-gfd~~--------~ptsdsg 158 (227)
T KOG1615|consen 89 LTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGK-YL-GFDTN--------EPTSDSG 158 (227)
T ss_pred cCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCc-cc-ccccC--------CccccCC
Confidence 5699999999999999999999999999999999999998632211111 111000 00 00000 0112234
Q ss_pred hHHHHHHHHhhc--CCEEEEecCCCCChHhHhhCCeeEEec
Q 013069 249 HKYEIVKHLQAR--NHICGMIGNGVNDAPALKKADIGIAVA 287 (450)
Q Consensus 249 ~K~~iV~~lq~~--g~~v~~iGDG~ND~~al~~AdvGIa~~ 287 (450)
-|.+++..+++. ...++|||||+||.+|+..|+.=|+.+
T Consensus 159 gKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 159 GKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred ccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 699999999874 456999999999999999988777765
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.58 E-value=4.7e-07 Score=85.27 Aligned_cols=140 Identities=13% Similarity=0.017 Sum_probs=87.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCC-ccccCCchhhhhhcCChhHHhhhccceeecC
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPS-SALSGQDRDESIVALPVDELIEKADGFAGVF 246 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 246 (450)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++.....+.. ..+.+..... ..+..+.. .+....
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~---~~p~~~~~----~~~~~c 141 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHI---DWPHPCDG----TCQNQC 141 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEE---eCCCCCcc----ccccCC
Confidence 358999999999999999999999999999999988887543222211 1111111100 00000000 000011
Q ss_pred hhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 247 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 247 P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
...|..+++.++.....|+|+|||.||.+|++.||+.++-+.-.+-.++.---...=++|..|...+.
T Consensus 142 g~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~ 209 (214)
T TIGR03333 142 GCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPFQDFYDVRKELE 209 (214)
T ss_pred CCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCcCCHHHHHHHHH
Confidence 34799999998888888999999999999999999977754211111111111122255777766654
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.45 E-value=3.2e-07 Score=84.08 Aligned_cols=91 Identities=23% Similarity=0.276 Sum_probs=68.4
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC-CCccccCCchhhhhhcCChhHHhhhccceeecChh-h
Q 013069 172 HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY-PSSALSGQDRDESIVALPVDELIEKADGFAGVFPE-H 249 (450)
Q Consensus 172 ~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~-~ 249 (450)
+++.+.|+.+++.|++++|+||+....+..+++.+|++.... .... .... ......+++|. +
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~-~~~~---------------~~~~~~~~~~~~~ 155 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNEL-FDNG---------------GGIFTGRITGSNC 155 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEE-ECTT---------------CCEEEEEEEEEEE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEee-eecc---------------cceeeeeECCCCC
Confidence 788899999999999999999999999999999999974211 1111 1000 01123444444 3
Q ss_pred --HHHHHHHH------hhcCCEEEEecCCCCChHhHh
Q 013069 250 --KYEIVKHL------QARNHICGMIGNGVNDAPALK 278 (450)
Q Consensus 250 --K~~iV~~l------q~~g~~v~~iGDG~ND~~al~ 278 (450)
|...++.+ +.....++++|||.||.+|||
T Consensus 156 ~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 156 GGKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp SHHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred CcHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 99999999 445789999999999999986
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.41 E-value=2.6e-06 Score=80.45 Aligned_cols=130 Identities=22% Similarity=0.304 Sum_probs=82.9
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC-CCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT-NMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++|++.++++.|++.|+++.++||.....+..+.+.+|+.. +.+...+....+. ...... .......+.
T Consensus 85 l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g--~~~g~~--------~~~~~~~~~ 154 (224)
T PLN02954 85 LSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSG--EYAGFD--------ENEPTSRSG 154 (224)
T ss_pred CCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCC--cEECcc--------CCCcccCCc
Confidence 78999999999999999999999999999999999999963 1111100000000 000000 000001123
Q ss_pred hHHHHHHHHhhc--CCEEEEecCCCCChHhHhh--CCeeEEeccc--hHHHhhccCEEecCCCchHHHH
Q 013069 249 HKYEIVKHLQAR--NHICGMIGNGVNDAPALKK--ADIGIAVADA--TDAARSAADIVLTEPGLNVIIT 311 (450)
Q Consensus 249 ~K~~iV~~lq~~--g~~v~~iGDG~ND~~al~~--AdvGIa~~~~--~~~a~~aaDivl~~~~l~~i~~ 311 (450)
.|...++.+.+. ...++|+||+.||..|.+. ++++++.+.. .+.....+|+++.+ +..+..
T Consensus 155 ~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~el~~ 221 (224)
T PLN02954 155 GKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTD--FQDLIE 221 (224)
T ss_pred cHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECC--HHHHHH
Confidence 477777776654 3569999999999999887 4555655532 23345568998854 555544
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.36 E-value=2.1e-06 Score=81.04 Aligned_cols=110 Identities=16% Similarity=0.092 Sum_probs=74.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC-C-CccccCCchhhhhhcCChhHHhhhccceeecC
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY-P-SSALSGQDRDESIVALPVDELIEKADGFAGVF 246 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~-~-~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 246 (450)
+++|++.+.++.|++.|+++.++||-....+..+.+.+ +....+ . ...+.+...... .+.... .-+....
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~---kp~p~~----~~~~~~~ 145 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITIT---WPHPCD----EHCQNHC 145 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEe---ccCCcc----ccccccC
Confidence 58999999999999999999999999999999999888 643111 0 111111110000 000000 0000000
Q ss_pred hhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEe
Q 013069 247 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 286 (450)
Q Consensus 247 P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~ 286 (450)
...|..+++.++.....|+|+|||.||.+|.+.||+.++-
T Consensus 146 ~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~ 185 (219)
T PRK09552 146 GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFAR 185 (219)
T ss_pred CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeH
Confidence 1348889998887777899999999999999999997773
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.35 E-value=2e-06 Score=82.93 Aligned_cols=147 Identities=17% Similarity=0.126 Sum_probs=98.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCC--C--CCccc-cCC--chhhh--------------
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNM--Y--PSSAL-SGQ--DRDES-------------- 226 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~--~--~~~~l-~~~--~~~~~-------------- 226 (450)
.+..+.+.++|+++++.|+.++++||+....+..+.+++++..+. + ++..+ .+. ..+..
T Consensus 20 ~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (249)
T TIGR01485 20 NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIV 99 (249)
T ss_pred hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHH
Confidence 456688999999999999999999999999999999988876431 1 11111 110 00000
Q ss_pred ---hh---cC--------------------C----h---hHHhhhc--cc--------eeecCh--hhHHHHHHHHhhc-
Q 013069 227 ---IV---AL--------------------P----V---DELIEKA--DG--------FAGVFP--EHKYEIVKHLQAR- 260 (450)
Q Consensus 227 ---~~---~~--------------------~----~---~~~~~~~--~v--------~a~~~P--~~K~~iV~~lq~~- 260 (450)
.. .. . . .+.+... .+ +-.+.| ..|...++.+.+.
T Consensus 100 ~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~ 179 (249)
T TIGR01485 100 VAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKL 179 (249)
T ss_pred HHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHc
Confidence 00 00 0 0 0011110 01 112333 4688888888664
Q ss_pred ---CCEEEEecCCCCChHhHhh-CCeeEEeccchHHHhhccC-------EEecCCCchHHHHHHH
Q 013069 261 ---NHICGMIGNGVNDAPALKK-ADIGIAVADATDAARSAAD-------IVLTEPGLNVIITAVL 314 (450)
Q Consensus 261 ---g~~v~~iGDG~ND~~al~~-AdvGIa~~~~~~~a~~aaD-------ivl~~~~l~~i~~~I~ 314 (450)
...|+++||+.||.+|++. ++.|++|+|+.+..++.++ ++....+-+++.+++.
T Consensus 180 ~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 180 AMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred CCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3569999999999999998 7799999999999987543 6666667788888876
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.33 E-value=2.2e-06 Score=78.26 Aligned_cols=113 Identities=16% Similarity=0.078 Sum_probs=75.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceee-cCh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG-VFP 247 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~-~~P 247 (450)
++++++.+.++.|++.|+++.++|+........+.+..|+.... ..++........ .. ...-....+..+.. ...
T Consensus 72 ~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~~~~~~~~~-~g-~~~~~~~~~~~~~~~~~g 147 (188)
T TIGR01489 72 PIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF--IEIYSNPASFDN-DG-RHIVWPHHCHGCCSCPCG 147 (188)
T ss_pred CCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe--eEEeccCceECC-CC-cEEEecCCCCccCcCCCC
Confidence 68999999999999999999999999999999999998885321 011111000000 00 00000001111111 122
Q ss_pred hhHHHHHHHHhhc-CCEEEEecCCCCChHhHhhCCeeEE
Q 013069 248 EHKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIGIA 285 (450)
Q Consensus 248 ~~K~~iV~~lq~~-g~~v~~iGDG~ND~~al~~AdvGIa 285 (450)
..|..+++.++.. ...++++|||.||..|.+.||+-.|
T Consensus 148 ~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 148 CCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 3589999999887 8899999999999999999987654
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.2e-06 Score=79.37 Aligned_cols=99 Identities=19% Similarity=0.250 Sum_probs=69.3
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCcc-ccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSA-LSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
+++++.+.++.+++.|++++++||.....+..+++.+|+.. .+.... ..... .+... ...-....+.
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~-~~~~~~~~~~~g---~~~g~--------~~~~~~~~~~ 141 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDD-VFANRLEFDDNG---LLTGP--------IEGQVNPEGE 141 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCch-heeeeEEECCCC---EEeCc--------cCCcccCCcc
Confidence 68999999999999999999999999999999999999862 111110 00000 00000 0000124467
Q ss_pred hHHHHHHHHhhc----CCEEEEecCCCCChHhHhhC
Q 013069 249 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKA 280 (450)
Q Consensus 249 ~K~~iV~~lq~~----g~~v~~iGDG~ND~~al~~A 280 (450)
.|..+++.+.+. ...++++|||.||.+|++.|
T Consensus 142 ~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 142 CKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred hHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 899999887654 34599999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=98.30 E-value=2.1e-06 Score=79.65 Aligned_cols=108 Identities=16% Similarity=0.139 Sum_probs=76.5
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccce-eecC
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF-AGVF 246 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~-a~~~ 246 (450)
.++++++.+.|+.+++.|++++++||.....+..+++.+|+.. .+...+....+. .... .+. ..+.
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~-~~~~~l~~~~~g--~~~g----------~~~~~~~~ 152 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDN-AIGTRLEESEDG--IYTG----------NIDGNNCK 152 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcc-eEecceEEcCCC--EEeC----------CccCCCCC
Confidence 3579999999999999999999999999999999999999853 111111100000 0000 000 1234
Q ss_pred hhhHHHHHHHHhhc-C---CEEEEecCCCCChHhHhhCCeeEEecc
Q 013069 247 PEHKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVAD 288 (450)
Q Consensus 247 P~~K~~iV~~lq~~-g---~~v~~iGDG~ND~~al~~AdvGIa~~~ 288 (450)
++.|...++.+.+. + ..+.++||+.+|.+|++.|+.++++..
T Consensus 153 g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 153 GEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred ChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCC
Confidence 57788877766543 3 368999999999999999999998863
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.4e-05 Score=75.35 Aligned_cols=126 Identities=16% Similarity=0.198 Sum_probs=87.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecC-
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF- 246 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~- 246 (450)
.++.+++.+.++.|++.|+++.++||........+.+.+|+.... ..++.+. -+....
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~-------------------~~~~~kp 150 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF--SVVIGGD-------------------SLPNKKP 150 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc--cEEEcCC-------------------CCCCCCc
Confidence 357899999999999999999999999999999999999985211 0111100 011112
Q ss_pred -hhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCe-eEEecc----chHHHhhccCEEecCCCchHHHHHHHHH
Q 013069 247 -PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVAD----ATDAARSAADIVLTEPGLNVIITAVLIS 316 (450)
Q Consensus 247 -P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~Adv-GIa~~~----~~~~a~~aaDivl~~~~l~~i~~~I~~~ 316 (450)
|+--..+++.++.....++++||+.||+.+.+.|++ +|.+.. ..+.....+++++ +++..+..++.++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~~ 224 (226)
T PRK13222 151 DPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGLA 224 (226)
T ss_pred ChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHHh
Confidence 222234555555556779999999999999999999 555542 2333445678877 5688887777643
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.16 E-value=1.1e-05 Score=83.43 Aligned_cols=71 Identities=24% Similarity=0.244 Sum_probs=56.1
Q ss_pred ecChh--hHHHHHHHHhhc----C---CEEEEecCCCCChHhHhhCC-eeEEeccchHHHhhcc--------CEEec-CC
Q 013069 244 GVFPE--HKYEIVKHLQAR----N---HICGMIGNGVNDAPALKKAD-IGIAVADATDAARSAA--------DIVLT-EP 304 (450)
Q Consensus 244 ~~~P~--~K~~iV~~lq~~----g---~~v~~iGDG~ND~~al~~Ad-vGIa~~~~~~~a~~aa--------Divl~-~~ 304 (450)
++.|. .|...++.|.+. | ..|+++||+.||.+||+.++ .||+|+|+.+..++.+ +++.. ++
T Consensus 168 dI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~ 247 (413)
T PLN02382 168 DVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATER 247 (413)
T ss_pred EEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCC
Confidence 44454 599988888665 2 36999999999999999999 6999999999998743 55533 55
Q ss_pred CchHHHHHHH
Q 013069 305 GLNVIITAVL 314 (450)
Q Consensus 305 ~l~~i~~~I~ 314 (450)
+-++|.++|.
T Consensus 248 ~~~GI~~al~ 257 (413)
T PLN02382 248 CAAGIIQAIG 257 (413)
T ss_pred CccHHHHHHH
Confidence 6778888886
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.15 E-value=3.2e-06 Score=80.72 Aligned_cols=68 Identities=16% Similarity=0.173 Sum_probs=59.3
Q ss_pred hhHHHHHHHHhhc-C---CEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccC----EEecCCCchHHHHHHHH
Q 013069 248 EHKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAAD----IVLTEPGLNVIITAVLI 315 (450)
Q Consensus 248 ~~K~~iV~~lq~~-g---~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaD----ivl~~~~l~~i~~~I~~ 315 (450)
..|...++.+.++ | ..|+++||+.||.+|++.+++||+|+|+.+.++..|| +|...++-.++.++|.+
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 3688888888764 2 3589999999999999999999999999999999999 88888888899988863
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.10 E-value=2.4e-05 Score=73.94 Aligned_cols=126 Identities=19% Similarity=0.221 Sum_probs=90.2
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecC
Q 013069 167 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 246 (450)
Q Consensus 167 ~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 246 (450)
...+-+++++++..|+++|++..++|++....+..+.+..|+..-. ..+.|.+. .....-.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F---~~i~g~~~----------------~~~~KP~ 147 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYF---DVIVGGDD----------------VPPPKPD 147 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcccc---ceEEcCCC----------------CCCCCcC
Confidence 3457899999999999999999999999999999999999986321 01111000 0112234
Q ss_pred hhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCC---eeEEecc--chHHHhhccCEEecCCCchHHHHHH
Q 013069 247 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKAD---IGIAVAD--ATDAARSAADIVLTEPGLNVIITAV 313 (450)
Q Consensus 247 P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~Ad---vGIa~~~--~~~~a~~aaDivl~~~~l~~i~~~I 313 (450)
|.....+++.+......++||||..+|+.|=+.|+ ||+..|. ........+|+++.+ +..+...+
T Consensus 148 P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~--~~el~~~l 217 (220)
T COG0546 148 PEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDS--LAELLALL 217 (220)
T ss_pred HHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECC--HHHHHHHH
Confidence 55556666666655457999999999999999999 5666663 445666678999854 66655544
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=98.03 E-value=1.9e-05 Score=67.16 Aligned_cols=118 Identities=14% Similarity=0.071 Sum_probs=73.8
Q ss_pred cCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceee
Q 013069 165 PLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 244 (450)
Q Consensus 165 ~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~ 244 (450)
....++.+++.+.++.|++.|++++++||.....+....+.+|+... ...++........... ...........+..
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~ 96 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDY--FDPVITSNGAAIYYPK-EGLFLGGGPFDIGK 96 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchh--hhheeccchhhhhccc-ccccccccccccCC
Confidence 34458899999999999999999999999999999999999987311 0111110000000000 00000000011223
Q ss_pred cChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhh-CCeeEE
Q 013069 245 VFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKK-ADIGIA 285 (450)
Q Consensus 245 ~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~-AdvGIa 285 (450)
-.|+.+..+.+.+......++++||+.+|+.|++. ..-+|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 97 PNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 34555556666666556789999999999999998 444443
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=98.01 E-value=3.5e-05 Score=71.75 Aligned_cols=124 Identities=16% Similarity=0.200 Sum_probs=82.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.++++.|++.|+++.++|+.....+....+.+|+..-. . .++...+ .....-.|+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f-~-~i~~~~~-----------------~~~~KP~~~ 135 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF-D-HVIGSDE-----------------VPRPKPAPD 135 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe-e-eEEecCc-----------------CCCCCCChH
Confidence 57899999999999999999999999999888888888885210 0 0000000 001112232
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEE-e--c--cchHHHhhccCEEecCCCchHHHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-V--A--DATDAARSAADIVLTEPGLNVIITAV 313 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa-~--~--~~~~~a~~aaDivl~~~~l~~i~~~I 313 (450)
-=..+++.++-....|+||||+.+|+.+-+.+++... + | ...+.....+|+++.+ +..+..++
T Consensus 136 ~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~--~~~l~~~~ 203 (205)
T TIGR01454 136 IVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRK--PQSLLALC 203 (205)
T ss_pred HHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCC--HHHHHHHh
Confidence 2234455555456679999999999999999999743 2 2 2233456678988744 55555443
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.00 E-value=2.3e-05 Score=74.46 Aligned_cols=44 Identities=14% Similarity=0.140 Sum_probs=38.9
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC
Q 013069 167 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 210 (450)
Q Consensus 167 ~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~ 210 (450)
.+..-+.+.++|++|++.|+.++++||+....+..+.+++|+..
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 34555679999999999999999999999999999999999853
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.99 E-value=3.8e-05 Score=72.37 Aligned_cols=39 Identities=21% Similarity=0.216 Sum_probs=35.9
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 013069 171 IHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 209 (450)
Q Consensus 171 r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~ 209 (450)
-+.++++|+.|++.|++++++||+....+..+.+.+|+.
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 344899999999999999999999999999999999986
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.89 E-value=6.5e-05 Score=79.03 Aligned_cols=98 Identities=16% Similarity=0.188 Sum_probs=73.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
|+++++.+.|+++++.|++++++|+-+...+..+++.+|+.+.. + +.+. ..++.|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~V-----i-gsd~------------------~~~~kg~ 127 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDGV-----F-ASDG------------------TTNLKGA 127 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCEE-----E-eCCC------------------ccccCCc
Confidence 47899999999999999999999999999999999999973211 1 1100 1235566
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATD 291 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~ 291 (450)
.|.+.+...... +.+.++||+.+|.++++.|+-+++++.+..
T Consensus 128 ~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~ 169 (479)
T PRK08238 128 AKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVGASPG 169 (479)
T ss_pred hHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEECCCHH
Confidence 676655432222 226789999999999999999999985443
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.87 E-value=2.6e-05 Score=75.98 Aligned_cols=140 Identities=9% Similarity=0.125 Sum_probs=85.6
Q ss_pred CCCcchHHHHHHHHh-CCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccc---CC--------ch-hh-------hh-
Q 013069 169 PPIHDSAETIRRALS-LGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALS---GQ--------DR-DE-------SI- 227 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~-~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~---~~--------~~-~~-------~~- 227 (450)
.+-+++.++|++|++ .|+.++++||+....+..+.+.+++.-...++..+. +. +. .. ..
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 455789999999997 799999999999999988887666421000100000 00 00 00 00
Q ss_pred ------------------hcCC--------h-hHHhhhcc--------ceeecCh--hhHHHHHHHHhhc----CCEEEE
Q 013069 228 ------------------VALP--------V-DELIEKAD--------GFAGVFP--EHKYEIVKHLQAR----NHICGM 266 (450)
Q Consensus 228 ------------------~~~~--------~-~~~~~~~~--------v~a~~~P--~~K~~iV~~lq~~----g~~v~~ 266 (450)
...+ + ..+.+... .+.++.| .+|...++.+.+. ...+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 0000 0 00111111 1223344 3788888876654 356999
Q ss_pred ecCCCCChHhHhhC----CeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 267 IGNGVNDAPALKKA----DIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 267 iGDG~ND~~al~~A----dvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
+||+.||.+||+.+ +.||+||++. ..|++.+.+ ...+...+.
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~----~~A~~~l~~--~~~v~~~L~ 241 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGA----TQASWRLAG--VPDVWSWLE 241 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCC----CcCeEeCCC--HHHHHHHHH
Confidence 99999999999999 9999999875 456777754 555544443
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00011 Score=68.94 Aligned_cols=123 Identities=17% Similarity=0.161 Sum_probs=81.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhh
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 249 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 249 (450)
+.+++.++++.|++.|+++.++|+.....+..+.+.+|+..-. ..++...+. ....-.|+-
T Consensus 83 ~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~-----------------~~~Kp~p~~ 143 (214)
T PRK13288 83 EYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF--DVVITLDDV-----------------EHAKPDPEP 143 (214)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce--eEEEecCcC-----------------CCCCCCcHH
Confidence 6799999999999999999999999999999999999985311 011110000 001122332
Q ss_pred HHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEE---ecc-chH-HHhhccCEEecCCCchHHHHHH
Q 013069 250 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA---VAD-ATD-AARSAADIVLTEPGLNVIITAV 313 (450)
Q Consensus 250 K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa---~~~-~~~-~a~~aaDivl~~~~l~~i~~~I 313 (450)
-..+++.+......++||||+.+|+.|-+.|++-.. -+. ..+ .....+|+++. ++..+...+
T Consensus 144 ~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~--~~~~l~~~i 210 (214)
T PRK13288 144 VLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLD--KMSDLLAIV 210 (214)
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEEC--CHHHHHHHH
Confidence 334455554445679999999999999999998533 231 222 23456888764 577666654
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.0002 Score=69.82 Aligned_cols=42 Identities=7% Similarity=0.018 Sum_probs=38.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 210 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~ 210 (450)
..-+.+.++|++|++.|+.|++.||........+.+++|+..
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 355678999999999999999999999999999999999864
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00014 Score=71.12 Aligned_cols=125 Identities=14% Similarity=0.164 Sum_probs=80.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecCh
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 247 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 247 (450)
.++.+++.++|+.|++.|+++.++|+.....+..+....|+.... ..++.+.+. ....-.|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f--~~i~~~d~~-----------------~~~Kp~p 160 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF--RWIIGGDTL-----------------PQKKPDP 160 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC--eEEEecCCC-----------------CCCCCCc
Confidence 367899999999999999999999999998888888888874210 001100000 0001111
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCee-EEecc----chHHHhhccCEEecCCCchHHHHHH
Q 013069 248 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVAD----ATDAARSAADIVLTEPGLNVIITAV 313 (450)
Q Consensus 248 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvG-Ia~~~----~~~~a~~aaDivl~~~~l~~i~~~I 313 (450)
+-=..+++.+.-....|+||||+.||+.+.+.|++. +++.. ..+.....+|+++. ++..+..++
T Consensus 161 ~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~el~~~~ 229 (272)
T PRK13223 161 AALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRALLPGC 229 (272)
T ss_pred HHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHHHHHHH
Confidence 111233333333456799999999999999999974 44432 22334457888884 466665443
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00014 Score=67.77 Aligned_cols=121 Identities=15% Similarity=0.156 Sum_probs=78.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.++++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.+. ....-.|+
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~p~ 145 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF--SVLIGGDSL-----------------AQRKPHPD 145 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC--cEEEecCCC-----------------CCCCCChH
Confidence 47899999999999999999999999999999999999985211 011110000 00111122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEec---cc--hHHHhhccCEEecCCCchHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA---DA--TDAARSAADIVLTEPGLNVII 310 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~---~~--~~~a~~aaDivl~~~~l~~i~ 310 (450)
-=..+.+.+......+++|||+.+|+.+.+.|++....- .. .......+|+++.+ +..+.
T Consensus 146 ~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~--~~~l~ 210 (213)
T TIGR01449 146 PLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDS--LNELP 210 (213)
T ss_pred HHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCC--HHHHH
Confidence 123344444444566999999999999999999875532 11 12223467887743 55444
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00057 Score=66.58 Aligned_cols=128 Identities=12% Similarity=0.073 Sum_probs=83.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC----------CCccccCCchhhhhhcCChhHHhh
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY----------PSSALSGQDRDESIVALPVDELIE 237 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~----------~~~~l~~~~~~~~~~~~~~~~~~~ 237 (450)
-+++|++.+.++.|++.|+++.++||-....+..+.+++|+..... ...++.|...
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~-------------- 185 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKG-------------- 185 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCC--------------
Confidence 4589999999999999999999999999999999999999852211 0011111000
Q ss_pred hccceeecChhhHHHHHHH-----Hh--hcCCEEEEecCCCCChHhHhhC---CeeEEec--cc-----hHHHhhccCEE
Q 013069 238 KADGFAGVFPEHKYEIVKH-----LQ--ARNHICGMIGNGVNDAPALKKA---DIGIAVA--DA-----TDAARSAADIV 300 (450)
Q Consensus 238 ~~~v~a~~~P~~K~~iV~~-----lq--~~g~~v~~iGDG~ND~~al~~A---dvGIa~~--~~-----~~~a~~aaDiv 300 (450)
--+....|.+.+.. +. .....|+++|||.||+.|..-. .--+.+| |. -+.-.++-|||
T Consensus 186 -----P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Div 260 (277)
T TIGR01544 186 -----PLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIV 260 (277)
T ss_pred -----CcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEE
Confidence 00111345554432 22 2345799999999999996644 2234444 32 23345678999
Q ss_pred ecCCCchHHHHHHH
Q 013069 301 LTEPGLNVIITAVL 314 (450)
Q Consensus 301 l~~~~l~~i~~~I~ 314 (450)
+.++.--.++..|.
T Consensus 261 l~~D~t~~v~~~il 274 (277)
T TIGR01544 261 LVQDETLEVANSIL 274 (277)
T ss_pred EECCCCchHHHHHH
Confidence 99887666665554
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00026 Score=66.42 Aligned_cols=103 Identities=13% Similarity=0.028 Sum_probs=73.9
Q ss_pred CCcchHHHH-HHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC--CCCCCCccccCCchhhhhhcCChhHHhhhccc-eeec
Q 013069 170 PIHDSAETI-RRALSLGLGVKMITGDQLAIAKETGRRLGMG--TNMYPSSALSGQDRDESIVALPVDELIEKADG-FAGV 245 (450)
Q Consensus 170 lr~~~~~~I-~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v-~a~~ 245 (450)
+.|++.+.| +.+++.|++++++|+-....+..+++.+|+. .+.+ +...+... ...+ -..|
T Consensus 96 ~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i------~t~l~~~~----------tg~~~g~~c 159 (211)
T PRK11590 96 AFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVNLI------ASQMQRRY----------GGWVLTLRC 159 (211)
T ss_pred CCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCceE------EEEEEEEE----------ccEECCccC
Confidence 589999999 5788899999999999999999999999962 1111 11110000 0000 1235
Q ss_pred ChhhHHHHHHHH-hhcCCEEEEecCCCCChHhHhhCCeeEEecc
Q 013069 246 FPEHKYEIVKHL-QARNHICGMIGNGVNDAPALKKADIGIAVAD 288 (450)
Q Consensus 246 ~P~~K~~iV~~l-q~~g~~v~~iGDG~ND~~al~~AdvGIa~~~ 288 (450)
..+.|..-++.. ......+.+-||+.||.|||+.|+.+++++.
T Consensus 160 ~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 160 LGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred CChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECc
Confidence 678888777654 3345567789999999999999999999963
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00017 Score=68.08 Aligned_cols=120 Identities=17% Similarity=0.223 Sum_probs=75.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.|++.++|+.|++.|+++.++|+........+.+.+|+..-. ..++.+.+. ....-.|+
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~~ 152 (222)
T PRK10826 92 PLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF--DALASAEKL-----------------PYSKPHPE 152 (222)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc--cEEEEcccC-----------------CCCCCCHH
Confidence 57899999999999999999999999999999999999885321 011110000 00111222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEec-cc---hHHHhhccCEEecCCCchHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DA---TDAARSAADIVLTEPGLNVI 309 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~-~~---~~~a~~aaDivl~~~~l~~i 309 (450)
-=..+.+.+.-....|+||||..||+.+-+.|++....- .+ .+.-...+|+++.+ +..+
T Consensus 153 ~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~--~~dl 215 (222)
T PRK10826 153 VYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLES--LTEL 215 (222)
T ss_pred HHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccC--HHHH
Confidence 112223333333456999999999999999999876543 21 11222346776643 4444
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0005 Score=64.61 Aligned_cols=125 Identities=18% Similarity=0.162 Sum_probs=78.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecCh
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 247 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 247 (450)
.++.+|+.+.++.|++.|+++.++|+-....+..+.+.+|+....+-..++...+.. ...-.|
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~-----------------~~KP~p 148 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVA-----------------AGRPAP 148 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCC-----------------CCCCCH
Confidence 368999999999999999999999999999999999999885111111111111100 011122
Q ss_pred hhHHHHHHHHhhc-CCEEEEecCCCCChHhHhhCCeeEE--eccc---hH-HHhhccCEEecCCCchHHHH
Q 013069 248 EHKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIGIA--VADA---TD-AARSAADIVLTEPGLNVIIT 311 (450)
Q Consensus 248 ~~K~~iV~~lq~~-g~~v~~iGDG~ND~~al~~AdvGIa--~~~~---~~-~a~~aaDivl~~~~l~~i~~ 311 (450)
+-=...++.+.-. ...++||||+.+|+.+-+.|++..+ +..+ .. .....+|+++. ++..+..
T Consensus 149 ~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~--~~~~l~~ 217 (220)
T TIGR03351 149 DLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLD--SVADLPA 217 (220)
T ss_pred HHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeec--CHHHHHH
Confidence 2212333444333 3579999999999999999999863 3221 11 22345677764 3555544
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00057 Score=72.10 Aligned_cols=176 Identities=20% Similarity=0.234 Sum_probs=117.3
Q ss_pred CCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC-----------CCcc-------
Q 013069 156 SPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY-----------PSSA------- 217 (450)
Q Consensus 156 ~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~-----------~~~~------- 217 (450)
.+-.|.|++.+.-+.+++....|+.|-++-|+.+..+-.+....+-.|+++||..... |..-
T Consensus 813 sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q 892 (1354)
T KOG4383|consen 813 SGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQ 892 (1354)
T ss_pred ccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChh
Confidence 4568999999999999999999999999999999999999999999999999965211 0000
Q ss_pred ccC-------------------Cchhhh------hhcC------------------------------ChhHHhhhccce
Q 013069 218 LSG-------------------QDRDES------IVAL------------------------------PVDELIEKADGF 242 (450)
Q Consensus 218 l~~-------------------~~~~~~------~~~~------------------------------~~~~~~~~~~v~ 242 (450)
..+ .-.+.. +... +++.+......|
T Consensus 893 ~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LF 972 (1354)
T KOG4383|consen 893 FAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLF 972 (1354)
T ss_pred hhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeec
Confidence 000 000000 0000 011122223368
Q ss_pred eecChhhHHHHHHHHhhcCCEEEEecCCCCCh--HhHhhCCeeEEeccc-------------hHHH-hhccC--------
Q 013069 243 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDA--PALKKADIGIAVADA-------------TDAA-RSAAD-------- 298 (450)
Q Consensus 243 a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~--~al~~AdvGIa~~~~-------------~~~a-~~aaD-------- 298 (450)
..++|+.-.++++.+|+.|.+|+.+|...|-. -.+-+||++|++..- +... ..+.|
T Consensus 973 TDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiS 1052 (1354)
T KOG4383|consen 973 TDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQIS 1052 (1354)
T ss_pred cCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeec
Confidence 99999999999999999999999999988764 345789999998521 1110 11122
Q ss_pred ---------EEecCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 013069 299 ---------IVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI 331 (450)
Q Consensus 299 ---------ivl~~~~l~~i~~~I~~~R~~~~~i~~~~~~~~ 331 (450)
+-+....+-.|..+|.-+|....-+|..++|.+
T Consensus 1053 gqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiL 1094 (1354)
T KOG4383|consen 1053 GQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFIL 1094 (1354)
T ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 111222234567777778877777777666655
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00049 Score=65.41 Aligned_cols=124 Identities=13% Similarity=0.132 Sum_probs=81.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.|++.+.++.|++.|+++.++|+.....+..+-+.+|+.... ..++.+... ....-.|+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~p~ 155 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC--AVLIGGDTL-----------------AERKPHPL 155 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc--cEEEecCcC-----------------CCCCCCHH
Confidence 47899999999999999999999999998888888888875211 001111000 01122233
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEE-e--cc--ch-HHHhhccCEEecCCCchHHHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-V--AD--AT-DAARSAADIVLTEPGLNVIITAV 313 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa-~--~~--~~-~~a~~aaDivl~~~~l~~i~~~I 313 (450)
-=..+++.+.-....++||||+.+|+.|-+.|++... + +. .. ......+|+++.+ +..+.+.+
T Consensus 156 ~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~--~~el~~~~ 224 (229)
T PRK13226 156 PLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQ--PQLLWNPA 224 (229)
T ss_pred HHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCC--HHHHHHHh
Confidence 3344555665556779999999999999999998743 3 21 11 1223468888844 65555444
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00044 Score=76.87 Aligned_cols=61 Identities=18% Similarity=0.183 Sum_probs=47.4
Q ss_pred hhHHHHHHHHhhc--CCEEEEecCCCCChHhHhhC---CeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 248 EHKYEIVKHLQAR--NHICGMIGNGVNDAPALKKA---DIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 248 ~~K~~iV~~lq~~--g~~v~~iGDG~ND~~al~~A---dvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
.+|...++.+.+. ...|+++||+.||.+||+.+ +.+|+||++ +.+|++.+.++ ..+..++.
T Consensus 656 vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~s~A~~~l~~~--~eV~~~L~ 721 (726)
T PRK14501 656 VNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----ESRARYRLPSQ--REVRELLR 721 (726)
T ss_pred CCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----CCcceEeCCCH--HHHHHHHH
Confidence 4799999888764 35799999999999999986 688888874 46788888764 44555544
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00039 Score=64.61 Aligned_cols=39 Identities=28% Similarity=0.342 Sum_probs=35.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhC
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLG 207 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lg 207 (450)
++.+.+.++|++|++.|+.++++||+....+..+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 477899999999999999999999999999999988754
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0007 Score=73.09 Aligned_cols=40 Identities=10% Similarity=0.133 Sum_probs=36.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 209 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~ 209 (450)
.-+.+.++|++|+++|+.+++.||+....+..+.+++|+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 3457899999999999999999999999999999999974
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0015 Score=63.95 Aligned_cols=121 Identities=12% Similarity=0.088 Sum_probs=79.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+..... .++.+.. +. ..|+
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~--~vi~~~~------------------~~--~k~~ 199 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFS--VVQAGTP------------------IL--SKRR 199 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheE--EEEecCC------------------CC--CCHH
Confidence 577999999999999999999999999999999999999853210 0111100 00 0111
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEe---ccch--HHHhhccCEEecCCCchHHHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV---ADAT--DAARSAADIVLTEPGLNVIITAV 313 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~---~~~~--~~a~~aaDivl~~~~l~~i~~~I 313 (450)
-=..+++.+.-....++||||+.+|+.+-+.|++-... +... +.....+|+++ +++..+...+
T Consensus 200 ~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 200 ALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred HHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 11122233333345699999999999999999986432 2112 22344689887 4477666654
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00076 Score=63.37 Aligned_cols=107 Identities=11% Similarity=0.039 Sum_probs=73.4
Q ss_pred CCCcchHHHHH-HHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecCh
Q 013069 169 PPIHDSAETIR-RALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 247 (450)
Q Consensus 169 ~lr~~~~~~I~-~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 247 (450)
.++|++.++|+ .+++.|++++++|+-....+..+++..++.... .++ +...+.. .. .. -.-..|.-
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~---~~i-~t~le~~-~g---g~-----~~g~~c~g 160 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL---NLI-ASQIERG-NG---GW-----VLPLRCLG 160 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC---cEE-EEEeEEe-CC---ce-----EcCccCCC
Confidence 36899999996 788899999999999999999999886552210 011 1111000 00 00 01134566
Q ss_pred hhHHHHHHHH-hhcCCEEEEecCCCCChHhHhhCCeeEEecc
Q 013069 248 EHKYEIVKHL-QARNHICGMIGNGVNDAPALKKADIGIAVAD 288 (450)
Q Consensus 248 ~~K~~iV~~l-q~~g~~v~~iGDG~ND~~al~~AdvGIa~~~ 288 (450)
++|..-++.. ......+.+-||+.||.|||+.||.+++++.
T Consensus 161 ~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 161 HEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred hHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEECc
Confidence 7888766644 3334556789999999999999999999963
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00074 Score=65.09 Aligned_cols=68 Identities=19% Similarity=0.186 Sum_probs=48.1
Q ss_pred hhHHHHHHHHhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHH-----Hhhcc---C-EEecCCCchHHHHHHH
Q 013069 248 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDA-----ARSAA---D-IVLTEPGLNVIITAVL 314 (450)
Q Consensus 248 ~~K~~iV~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~-----a~~aa---D-ivl~~~~l~~i~~~I~ 314 (450)
..|...|+.|+.+ ...|+++||+.||.+||..++-||.++|+.+. ..... . ++...+.-.+|++++.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~ 243 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQ 243 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHH
Confidence 4699999999876 23588899999999999999999999998877 22222 2 3445556678888876
Q ss_pred H
Q 013069 315 I 315 (450)
Q Consensus 315 ~ 315 (450)
+
T Consensus 244 ~ 244 (247)
T PF05116_consen 244 H 244 (247)
T ss_dssp H
T ss_pred H
Confidence 3
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0016 Score=62.76 Aligned_cols=118 Identities=12% Similarity=0.146 Sum_probs=78.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.|++.++++.|++.|+++.++|+-....+...-+.+|+..-. ..++.+.+.. ...-.|+
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~iv~~~~~~-----------------~~KP~p~ 168 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFF--QAVIIGSECE-----------------HAKPHPD 168 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhC--cEEEecCcCC-----------------CCCCChH
Confidence 46889999999999999999999999999999999999985211 1111111000 1122233
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEE-ec--cchH-HHhhccCEEecCCC
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-VA--DATD-AARSAADIVLTEPG 305 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa-~~--~~~~-~a~~aaDivl~~~~ 305 (450)
-=..+++.+.-....++||||..+|+.+-+.|++-.. +. ...+ .....+|+++.+..
T Consensus 169 ~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~ 229 (248)
T PLN02770 169 PYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYE 229 (248)
T ss_pred HHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccch
Confidence 3344455555455679999999999999999998643 22 2112 22346788886543
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.002 Score=62.68 Aligned_cols=97 Identities=13% Similarity=0.057 Sum_probs=63.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++-|++.++|+.|++.|+++.++||.....+..+-+.+|+..-.. ..++...+. ....-.|+
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~-d~i~~~~~~-----------------~~~KP~p~ 162 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP-DHVVTTDDV-----------------PAGRPYPW 162 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc-eEEEcCCcC-----------------CCCCCChH
Confidence 467899999999999999999999999988887777777642110 111111000 01111222
Q ss_pred hHHHHHHHHhhc-CCEEEEecCCCCChHhHhhCCee
Q 013069 249 HKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIG 283 (450)
Q Consensus 249 ~K~~iV~~lq~~-g~~v~~iGDG~ND~~al~~AdvG 283 (450)
-=..+++.+.-. ...++||||+.+|+.+-+.|++-
T Consensus 163 ~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~ 198 (267)
T PRK13478 163 MALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMW 198 (267)
T ss_pred HHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCE
Confidence 223334444332 35699999999999999999974
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0015 Score=68.69 Aligned_cols=123 Identities=11% Similarity=0.051 Sum_probs=80.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+..-. ..++.+.+ +...-.|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f--~~i~~~d~------------------v~~~~kP~ 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV--TETFSIEQ------------------INSLNKSD 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc--ceeEecCC------------------CCCCCCcH
Confidence 68899999999999999999999999999999999999885211 11111110 00011122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCee-EEecc--chHHHhhccCEEecCCCchHHHHHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVAD--ATDAARSAADIVLTEPGLNVIITAVLI 315 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvG-Ia~~~--~~~~a~~aaDivl~~~~l~~i~~~I~~ 315 (450)
-=..+++.+ ....+++|||+.+|+.+-+.|++. |++.. ..+.....+|+++. ++..+..++..
T Consensus 390 ~~~~al~~l--~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~--~l~el~~~l~~ 455 (459)
T PRK06698 390 LVKSILNKY--DIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVID--DLLELKGILST 455 (459)
T ss_pred HHHHHHHhc--CcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeC--CHHHHHHHHHH
Confidence 111222222 235699999999999999999984 44432 22222345788874 47777666544
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0016 Score=63.35 Aligned_cols=116 Identities=18% Similarity=0.110 Sum_probs=76.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.++++.|++.|+++.++|+.....+..+-+.+|+..-. ..++.+.+.. ...-.|+
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~ii~~~d~~-----------------~~KP~Pe 169 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFF--SVVLAAEDVY-----------------RGKPDPE 169 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhC--cEEEecccCC-----------------CCCCCHH
Confidence 46899999999999999999999999999999999999885211 1111111000 0111222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeE-Eec-cchHHHhhccCEEecC
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI-AVA-DATDAARSAADIVLTE 303 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGI-a~~-~~~~~a~~aaDivl~~ 303 (450)
-=...++.+.-....++||||..+|+.+-+.|++-. ++. .........+|+++.+
T Consensus 170 ~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~ 226 (260)
T PLN03243 170 MFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRR 226 (260)
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCC
Confidence 223344445444567999999999999999999854 332 2222223357877654
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0029 Score=60.91 Aligned_cols=98 Identities=15% Similarity=0.108 Sum_probs=66.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+..-.. ..++.+.+. ....-.|+
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~-d~ii~~~~~-----------------~~~KP~p~ 160 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP-DYNVTTDDV-----------------PAGRPAPW 160 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC-ceEEccccC-----------------CCCCCCHH
Confidence 367999999999999999999999999999999888888753211 111111100 01111222
Q ss_pred hHHHHHHHHhhc-CCEEEEecCCCCChHhHhhCCeeE
Q 013069 249 HKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIGI 284 (450)
Q Consensus 249 ~K~~iV~~lq~~-g~~v~~iGDG~ND~~al~~AdvGI 284 (450)
-=...++.+.-. ...|+||||..+|+.+-+.|++..
T Consensus 161 ~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~ 197 (253)
T TIGR01422 161 MALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWT 197 (253)
T ss_pred HHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeE
Confidence 223344444432 456999999999999999999753
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0026 Score=59.80 Aligned_cols=115 Identities=13% Similarity=0.137 Sum_probs=73.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.|++.++++.|++.|+++.++|+.....+...-+..|+.. . ..++.+.+. ....-.|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~--~-~~i~~~~~~-----------------~~~KP~p~ 142 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA--P-EVFVTAERV-----------------KRGKPEPD 142 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC--c-cEEEEHHHh-----------------cCCCCCcH
Confidence 478999999999999999999999988776666666667631 1 111111000 01112232
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCee-EEeccch-HHHhhccCEEecC
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADAT-DAARSAADIVLTE 303 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvG-Ia~~~~~-~~a~~aaDivl~~ 303 (450)
-=....+.+.-....++||||..+|+.+-+.|++. |++..+. ......+|+++.+
T Consensus 143 ~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~ 199 (218)
T PRK11587 143 AYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHS 199 (218)
T ss_pred HHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEecc
Confidence 22334444544567799999999999999999985 5554322 2223456777644
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.001 Score=61.60 Aligned_cols=93 Identities=19% Similarity=0.152 Sum_probs=64.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecCh
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 247 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 247 (450)
+++.+++.++++.|++.|+++.++||.....+..+.+.+|+..-. ..++... ++...-.|
T Consensus 105 ~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~~~~~~------------------~~~~KP~p 164 (197)
T TIGR01548 105 DETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF--PVQIWME------------------DCPPKPNP 164 (197)
T ss_pred cccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC--CEEEeec------------------CCCCCcCH
Confidence 446677799999999999999999999999999999999985211 1111100 01112334
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCChHhHhhC
Q 013069 248 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKA 280 (450)
Q Consensus 248 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~A 280 (450)
+--..+++.+.-....|+||||+.+|+.+-+.|
T Consensus 165 ~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 165 EPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 443455566655566799999999999876654
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0028 Score=58.96 Aligned_cols=144 Identities=21% Similarity=0.296 Sum_probs=92.3
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCc-------cccCCchhhhhh------cCChhHHh
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSS-------ALSGQDRDESIV------ALPVDELI 236 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~-------~l~~~~~~~~~~------~~~~~~~~ 236 (450)
+-|++.++++.|+..= ..+++|---.+-+..+|..+|++....... .+...+..+.+. ..+-++++
T Consensus 84 lvPgA~etm~~l~~~~-tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geelf 162 (315)
T COG4030 84 LVPGAEETMATLQERW-TPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEELF 162 (315)
T ss_pred cCCChHHHHHHHhccC-CceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHHH
Confidence 5689999999998764 455555566677899999999965322111 111111111111 12223334
Q ss_pred hhcc-ceeecChhhHHHHHHHHh---------------hc---CCEEEEecCCCCChHhHhhCC-ee-EEec-cchHHHh
Q 013069 237 EKAD-GFAGVFPEHKYEIVKHLQ---------------AR---NHICGMIGNGVNDAPALKKAD-IG-IAVA-DATDAAR 294 (450)
Q Consensus 237 ~~~~-v~a~~~P~~K~~iV~~lq---------------~~---g~~v~~iGDG~ND~~al~~Ad-vG-Ia~~-~~~~~a~ 294 (450)
++.+ +|.+..|..-.+|++.++ .. ....+++||++.|+.||+.+. -| +|++ ||.+-|.
T Consensus 163 e~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeYal 242 (315)
T COG4030 163 EKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEYAL 242 (315)
T ss_pred HHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCcccc
Confidence 3333 577777765444444443 22 223688999999999999763 23 6665 7778888
Q ss_pred hccCEEecCCCchHHHHHHH
Q 013069 295 SAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 295 ~aaDivl~~~~l~~i~~~I~ 314 (450)
..||+.+.+++...+..+|.
T Consensus 243 ~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 243 KEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred cccceEEeccchhhhhHHHH
Confidence 88999999999998888887
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0021 Score=63.52 Aligned_cols=110 Identities=14% Similarity=0.067 Sum_probs=76.7
Q ss_pred cCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceee
Q 013069 165 PLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 244 (450)
Q Consensus 165 ~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~ 244 (450)
...+++.+++.++|+.|++.|++++++||.....+..+.+.+|+....+ ..+.+.+.. ...++. ..-.+
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f--~~i~~~~~~--------~~~~~~-~~~~k 251 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWF--DDLIGRPPD--------MHFQRE-QGDKR 251 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCch--hhhhCCcch--------hhhccc-CCCCC
Confidence 3577899999999999999999999999999999999999998853111 111111100 000000 00123
Q ss_pred cChhhHHHHHHHHhh-cCCEEEEecCCCCChHhHhhCCeeEE
Q 013069 245 VFPEHKYEIVKHLQA-RNHICGMIGNGVNDAPALKKADIGIA 285 (450)
Q Consensus 245 ~~P~~K~~iV~~lq~-~g~~v~~iGDG~ND~~al~~AdvGIa 285 (450)
-.|+-+...++.+.. ....++||||..+|+.+-+.|++...
T Consensus 252 p~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i 293 (300)
T PHA02530 252 PDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECW 293 (300)
T ss_pred CcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEE
Confidence 346667777776544 34789999999999999999998743
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0013 Score=62.82 Aligned_cols=88 Identities=19% Similarity=0.200 Sum_probs=60.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCC----cHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeec
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGD----QLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 245 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD----~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~ 245 (450)
+.+++.+.++.+++.|+++.++|+. ...++..+.+.+|+... . ..++.++... ..
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~-f-~~i~~~d~~~-------------------~~ 173 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAM-N-PVIFAGDKPG-------------------QY 173 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchh-e-eEEECCCCCC-------------------CC
Confidence 4556999999999999999999998 66789999999999631 1 1111111100 00
Q ss_pred ChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCee
Q 013069 246 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 283 (450)
Q Consensus 246 ~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvG 283 (450)
.| +|. ..+++.+ .++|+||..||..+-+.|++-
T Consensus 174 Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 174 QY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred CC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 12 232 2344444 489999999999999998875
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0028 Score=59.37 Aligned_cols=100 Identities=17% Similarity=0.245 Sum_probs=65.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.|++.++++.|++.|++++++|+-....+....+.+|+..-. ..++.+.+. ....-.|+
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~~ 154 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF--DAVITSEEE-----------------GVEKPHPK 154 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc--cEEEEeccC-----------------CCCCCCHH
Confidence 47899999999999999999999999888888888888874211 001110000 00111222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCC-CChHhHhhCCee-EEec
Q 013069 249 HKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIG-IAVA 287 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~-ND~~al~~AdvG-Ia~~ 287 (450)
-=..+.+.+.-....++||||.. +|+.+-+.|++- |.+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 155 IFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 22233444443456799999998 999999999975 4444
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0038 Score=61.48 Aligned_cols=117 Identities=18% Similarity=0.135 Sum_probs=71.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCC-ccccCCchhhhhhcCChhHHhhhccceeecCh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPS-SALSGQDRDESIVALPVDELIEKADGFAGVFP 247 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 247 (450)
++.|++.+.++.|++.|+++.++|+-.......+-+..+... .... .++.+.+. ....-.|
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~-~~~~~~~v~~~~~-----------------~~~KP~p 205 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPE-RAQGLDVFAGDDV-----------------PKKKPDP 205 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcccc-ccCceEEEecccc-----------------CCCCCCH
Confidence 478999999999999999999999988877776665553210 0000 01100000 0011122
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEec-cc--hHHHhhccCEEecC
Q 013069 248 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DA--TDAARSAADIVLTE 303 (450)
Q Consensus 248 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~-~~--~~~a~~aaDivl~~ 303 (450)
+-=..+++.+.-....++||||+.+|+.+-+.|++....- .+ .......+|+++.+
T Consensus 206 ~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~ 264 (286)
T PLN02779 206 DIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDC 264 (286)
T ss_pred HHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECC
Confidence 2223344555444567999999999999999999875543 22 11112357887744
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0022 Score=61.37 Aligned_cols=90 Identities=18% Similarity=0.183 Sum_probs=62.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCc----HHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceee
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQ----LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 244 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~----~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~ 244 (450)
.|.+++++.|+.+++.|+++.++||+. ..++..+.+.+|++...+-..++.++.
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~---------------------- 171 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDK---------------------- 171 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCC----------------------
Confidence 367889999999999999999999964 568888888899952211111111110
Q ss_pred cChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeE
Q 013069 245 VFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 284 (450)
Q Consensus 245 ~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGI 284 (450)
..-.+|...+ ++.+ .++|+||..+|..+-+.|++-.
T Consensus 172 ~~K~~K~~~l---~~~~-i~I~IGDs~~Di~aA~~AGi~~ 207 (237)
T PRK11009 172 PGQYTKTQWL---KKKN-IRIFYGDSDNDITAAREAGARG 207 (237)
T ss_pred CCCCCHHHHH---HhcC-CeEEEcCCHHHHHHHHHcCCcE
Confidence 0113344433 3333 4899999999999999998863
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.00086 Score=64.57 Aligned_cols=60 Identities=25% Similarity=0.358 Sum_probs=49.6
Q ss_pred eeecCh--hhHHHHHHHHhhcCCEEEEecC----CCCChHhHhhC-CeeEEeccchHHHhhccCEEe
Q 013069 242 FAGVFP--EHKYEIVKHLQARNHICGMIGN----GVNDAPALKKA-DIGIAVADATDAARSAADIVL 301 (450)
Q Consensus 242 ~a~~~P--~~K~~iV~~lq~~g~~v~~iGD----G~ND~~al~~A-dvGIa~~~~~~~a~~aaDivl 301 (450)
+.++.| .+|+.-++.|.+....|+++|| |.||.+||+.| -.|++++|+.+..+..+.+++
T Consensus 179 ~leI~~~gvsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 179 SFDVFPKGWDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred EEEeeeCCCcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 345555 4799999999888888999999 99999999976 678888899999988776543
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0042 Score=58.88 Aligned_cols=99 Identities=12% Similarity=0.050 Sum_probs=65.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecCh-
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP- 247 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P- 247 (450)
++.+++.+.++.|++.|+++.++|+-....+...-+.+|+..-. ..++.+.+ +....|
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~iv~s~~-------------------~~~~KP~ 151 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHL--DLLLSTHT-------------------FGYPKED 151 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHC--CEEEEeee-------------------CCCCCCC
Confidence 47899999999999999999999998888888777778774210 00110000 001112
Q ss_pred -hhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCee--EEecc
Q 013069 248 -EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG--IAVAD 288 (450)
Q Consensus 248 -~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvG--Ia~~~ 288 (450)
+-=..+.+.+.-....++||||..+|+.+-+.|++. +++.+
T Consensus 152 p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~ 195 (224)
T PRK14988 152 QRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTN 195 (224)
T ss_pred HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeC
Confidence 111222333433455699999999999999999996 34443
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.024 Score=54.03 Aligned_cols=129 Identities=19% Similarity=0.277 Sum_probs=82.1
Q ss_pred hhHHHHHHHHHHHHHhcchhhhh--hceecCCCCcCCCCCCcEEEEeccCCCCCCcchHHHHHHH--HhCCCeEEEEcCC
Q 013069 119 KIGRKVNAVINKFAERGLRSLAV--AYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRA--LSLGLGVKMITGD 194 (450)
Q Consensus 119 ~~~~~~~~~~~~~a~~Glr~l~v--A~~~~~~~~~~~~e~~~~~lG~i~l~D~lr~~~~~~I~~l--~~~Gi~v~mlTGD 194 (450)
...+.....+..+.++|.+.--+ +.+.+ |+.|+.+++++.+ +..|+.++++|.-
T Consensus 41 ~wt~~m~~vl~~L~~~gvt~~~I~~~l~~i----------------------p~~pgm~~~l~~l~~~~~~~~~~IiSDa 98 (234)
T PF06888_consen 41 GWTEYMDRVLQLLHEQGVTPEDIRDALRSI----------------------PIDPGMKELLRFLAKNQRGFDLIIISDA 98 (234)
T ss_pred chHHHHHHHHHHHHHcCCCHHHHHHHHHcC----------------------CCCccHHHHHHHHHhcCCCceEEEEeCC
Confidence 34555667777788777544333 33333 4788999999999 5689999999999
Q ss_pred cHHHHHHHHHHhCCCCCC---C-CCccccCCchhhhhhcCChhHHhhhccceeecCh-hhHHHHHHHHhhc----C---C
Q 013069 195 QLAIAKETGRRLGMGTNM---Y-PSSALSGQDRDESIVALPVDELIEKADGFAGVFP-EHKYEIVKHLQAR----N---H 262 (450)
Q Consensus 195 ~~~~a~~ia~~lgi~~~~---~-~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P-~~K~~iV~~lq~~----g---~ 262 (450)
+......+-+.-|+.... + +...+..... +.-.+. ..+.|..+.| -=|..+++.++.. | .
T Consensus 99 Ns~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~---l~v~py-----h~h~C~~C~~NmCK~~il~~~~~~~~~~g~~~~ 170 (234)
T PF06888_consen 99 NSFFIETILEHHGLRDCFSEIFTNPACFDADGR---LRVRPY-----HSHGCSLCPPNMCKGKILERLLQEQAQRGVPYD 170 (234)
T ss_pred cHhHHHHHHHhCCCccccceEEeCCceecCCce---EEEeCc-----cCCCCCcCCCccchHHHHHHHHHHHhhcCCCcc
Confidence 999999999999985321 1 1111111100 000000 0022334443 3599999888764 3 6
Q ss_pred EEEEecCCCCCh-HhH
Q 013069 263 ICGMIGNGVNDA-PAL 277 (450)
Q Consensus 263 ~v~~iGDG~ND~-~al 277 (450)
+|.+||||.||. |++
T Consensus 171 rviYiGDG~nD~Cp~~ 186 (234)
T PF06888_consen 171 RVIYIGDGRNDFCPAL 186 (234)
T ss_pred eEEEECCCCCCcCccc
Confidence 899999999996 444
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0039 Score=57.51 Aligned_cols=96 Identities=17% Similarity=0.179 Sum_probs=65.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.+++++|++.|+++.++|+-+......+.+.+|+.... . .++...+ .....|.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f-d-~i~~s~~-------------------~~~~KP~ 150 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF-D-AVLSADA-------------------VRAYKPA 150 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh-h-eeEehhh-------------------cCCCCCC
Confidence 47899999999999999999999999988888888888874211 0 0110000 0011122
Q ss_pred h--HHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEE
Q 013069 249 H--KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 285 (450)
Q Consensus 249 ~--K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa 285 (450)
. =..+.+.+.-....+++|||+.+|+.+-+.+++-..
T Consensus 151 ~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i 189 (198)
T TIGR01428 151 PQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTA 189 (198)
T ss_pred HHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEE
Confidence 1 123444444445679999999999999999987643
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0073 Score=51.91 Aligned_cols=93 Identities=14% Similarity=0.149 Sum_probs=63.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCc--------HHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcc
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQ--------LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~--------~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (450)
++.+++.++++.|++.|+++.++|+.. ......+.+.+|+.... ....+
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~-------------------- 81 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV---LYACP-------------------- 81 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE---EEECC--------------------
Confidence 578999999999999999999999998 77778888888874110 00000
Q ss_pred ceeecChhhHHHHHHHHh-hcCCEEEEecC-CCCChHhHhhCCeeE
Q 013069 241 GFAGVFPEHKYEIVKHLQ-ARNHICGMIGN-GVNDAPALKKADIGI 284 (450)
Q Consensus 241 v~a~~~P~~K~~iV~~lq-~~g~~v~~iGD-G~ND~~al~~AdvGI 284 (450)
.+..-.|+-=..+++.++ -....++|||| ..+|+.+-+.+++-.
T Consensus 82 ~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~ 127 (132)
T TIGR01662 82 HCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAF 127 (132)
T ss_pred CCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeE
Confidence 001111222234445552 44567999999 599999999988753
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0033 Score=56.68 Aligned_cols=110 Identities=15% Similarity=0.060 Sum_probs=74.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccc--eeecC
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADG--FAGVF 246 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v--~a~~~ 246 (450)
.++|+.++.++.++..++.++++|+.-......+-..++=....+...++..+..-+ .+.. ...+ .....
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih------~dg~--h~i~~~~ds~f 144 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIH------IDGQ--HSIKYTDDSQF 144 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEc------CCCc--eeeecCCcccc
Confidence 378999999999999999999999998888888887776211111111111110000 0000 0000 11223
Q ss_pred hhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEe
Q 013069 247 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 286 (450)
Q Consensus 247 P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~ 286 (450)
-.+|...|+.+.+....+.|+|||+.|.+|-+.+|+=+|-
T Consensus 145 G~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 145 GHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred CCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 4579999999999999999999999999998888876653
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0014 Score=58.13 Aligned_cols=97 Identities=19% Similarity=0.224 Sum_probs=67.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.+.++.|++.|++++++|+..........+.+|+..- ...++...+. ....-.|+
T Consensus 77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~--f~~i~~~~~~-----------------~~~Kp~~~ 137 (176)
T PF13419_consen 77 QPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDY--FDEIISSDDV-----------------GSRKPDPD 137 (176)
T ss_dssp EESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGG--CSEEEEGGGS-----------------SSSTTSHH
T ss_pred chhhhhhhhhhhcccccceeEEeecCCcccccccccccccccc--cccccccchh-----------------hhhhhHHH
Confidence 4789999999999999999999999999999999999988511 1111111000 00111122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeE
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 284 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGI 284 (450)
-=..+++.+.-....+++|||+..|+.+-+.||+.-
T Consensus 138 ~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 138 AYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp HHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEE
T ss_pred HHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeE
Confidence 223455555555677999999999999999998753
|
... |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.011 Score=53.85 Aligned_cols=127 Identities=20% Similarity=0.141 Sum_probs=69.5
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcH---------------HHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhH
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQL---------------AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 234 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~---------------~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~ 234 (450)
+.+++.+++++|++.|+++.++|.... .....+.+.+|+.- ...........+.
T Consensus 30 ~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f---~~i~~~~~~~~~~-------- 98 (181)
T PRK08942 30 PIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRL---DGIYYCPHHPEDG-------- 98 (181)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCcc---ceEEECCCCCCCC--------
Confidence 679999999999999999999998762 11112223344410 0000000000000
Q ss_pred HhhhccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEE-eccch--H-HHhhcc--CEEecCCCchH
Q 013069 235 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-VADAT--D-AARSAA--DIVLTEPGLNV 308 (450)
Q Consensus 235 ~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa-~~~~~--~-~a~~aa--Divl~~~~l~~ 308 (450)
.....-.|+--..+++.+.-....++||||+.+|+.+-+.|++..- +..+. . .....+ |+++. ++..
T Consensus 99 -----~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~--~l~e 171 (181)
T PRK08942 99 -----CDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLD--SLAD 171 (181)
T ss_pred -----CcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeec--CHHH
Confidence 0011222333344555555556779999999999999999997532 22221 1 112234 77763 3666
Q ss_pred HHHHHH
Q 013069 309 IITAVL 314 (450)
Q Consensus 309 i~~~I~ 314 (450)
+...+.
T Consensus 172 l~~~l~ 177 (181)
T PRK08942 172 LPQALK 177 (181)
T ss_pred HHHHHH
Confidence 655443
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0032 Score=57.25 Aligned_cols=99 Identities=9% Similarity=0.022 Sum_probs=59.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHH--------HHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccc
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLA--------IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADG 241 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~--------~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v 241 (450)
+.|++++++++|++.|+++.++|+.... ......+..|+..-. ......+.+. .
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~-~~~~~~~~~~-----------------~ 90 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIY-LCPHKHGDGC-----------------E 90 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEE-ECcCCCCCCC-----------------C
Confidence 6799999999999999999999987631 122223344543100 0000000000 0
Q ss_pred eeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEe
Q 013069 242 FAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 286 (450)
Q Consensus 242 ~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~ 286 (450)
...-.|+-=..+++.+......++||||..+|+.+-+.|++-...
T Consensus 91 ~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~ 135 (173)
T PRK06769 91 CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTIL 135 (173)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEE
Confidence 111222222445555544456799999999999999999986553
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.011 Score=60.38 Aligned_cols=117 Identities=15% Similarity=0.110 Sum_probs=77.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecCh
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 247 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 247 (450)
-++.+|+.++++.|++.|+++.++|+.....+..+-+.+||..-. ..++.+.+. ....-.|
T Consensus 215 ~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yF--d~Iv~sddv-----------------~~~KP~P 275 (381)
T PLN02575 215 YRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFF--SVIVAAEDV-----------------YRGKPDP 275 (381)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHc--eEEEecCcC-----------------CCCCCCH
Confidence 357899999999999999999999999999999999999985210 011111000 0011122
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEe-ccchHHH-hhccCEEecC
Q 013069 248 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV-ADATDAA-RSAADIVLTE 303 (450)
Q Consensus 248 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~-~~~~~~a-~~aaDivl~~ 303 (450)
+-=...++.+.-....|+||||..+|+.|-+.|++-... ..+.+.. ...+|+++.+
T Consensus 276 eifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~s 333 (381)
T PLN02575 276 EMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVRR 333 (381)
T ss_pred HHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEECC
Confidence 222345555555567899999999999999999986443 2322222 2357877644
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0094 Score=53.75 Aligned_cols=95 Identities=15% Similarity=0.158 Sum_probs=61.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.++++.|++.|++++++|+-.... ..+..++|+.... ..++.+.+ .....-.|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f--~~i~~~~~-----------------~~~~KP~~~ 144 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLF--DVVIFSGD-----------------VGRGKPDPD 144 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHC--CEEEEcCC-----------------CCCCCCCHH
Confidence 478999999999999999999999988877 5555557774210 00110000 001111222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCee
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 283 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvG 283 (450)
-=..+.+.+......+++|||...|+.+-+.+++-
T Consensus 145 ~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 145 IYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred HHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCE
Confidence 22344444544567899999999999999998874
|
HAD subfamilies caused by an overly broad single model. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.018 Score=58.71 Aligned_cols=68 Identities=24% Similarity=0.230 Sum_probs=47.9
Q ss_pred eecChh---hHHHHHHHHhhc-C-----C-EEEEecCCCCChHhHhh-----CCeeEEeccchHHHhhccCEEecCCCch
Q 013069 243 AGVFPE---HKYEIVKHLQAR-N-----H-ICGMIGNGVNDAPALKK-----ADIGIAVADATDAARSAADIVLTEPGLN 307 (450)
Q Consensus 243 a~~~P~---~K~~iV~~lq~~-g-----~-~v~~iGDG~ND~~al~~-----AdvGIa~~~~~~~a~~aaDivl~~~~l~ 307 (450)
-++.|. +|...|+.+.+. + . .++++||+.||..||+. +++||+|+++... -.|++.+.+ -.
T Consensus 292 lEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~--t~A~y~L~d--p~ 367 (384)
T PLN02580 292 LEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKE--SNAFYSLRD--PS 367 (384)
T ss_pred EEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCC--ccceEEcCC--HH
Confidence 355563 899999887654 2 1 25899999999999996 6899999875432 356777744 55
Q ss_pred HHHHHHH
Q 013069 308 VIITAVL 314 (450)
Q Consensus 308 ~i~~~I~ 314 (450)
.+...+.
T Consensus 368 eV~~~L~ 374 (384)
T PLN02580 368 EVMEFLK 374 (384)
T ss_pred HHHHHHH
Confidence 5554443
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.01 Score=55.53 Aligned_cols=120 Identities=11% Similarity=0.085 Sum_probs=73.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.++++.|++. +++.++|+-....+..+.+.+|+..-. ..++...+. ....-.|+
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f--d~i~~~~~~-----------------~~~KP~~~ 156 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF--DDIFVSEDA-----------------GIQKPDKE 156 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc--CEEEEcCcc-----------------CCCCCCHH
Confidence 4789999999999999 999999999988888888888885311 001000000 00111111
Q ss_pred hHHHHHHHH-hhcCCEEEEecCCC-CChHhHhhCCee-EEec--cchHHHhhccCEEecCCCchHHH
Q 013069 249 HKYEIVKHL-QARNHICGMIGNGV-NDAPALKKADIG-IAVA--DATDAARSAADIVLTEPGLNVII 310 (450)
Q Consensus 249 ~K~~iV~~l-q~~g~~v~~iGDG~-ND~~al~~AdvG-Ia~~--~~~~~a~~aaDivl~~~~l~~i~ 310 (450)
-=...++.+ .-....++||||+. +|+.+-+.+++. |.+. ..++.....+++++. ++..+.
T Consensus 157 ~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~--~~~el~ 221 (224)
T TIGR02254 157 IFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIR--SLEELY 221 (224)
T ss_pred HHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEEC--CHHHHH
Confidence 112344444 33345699999998 899999999974 3333 222122234566653 354444
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.0053 Score=55.72 Aligned_cols=95 Identities=12% Similarity=0.064 Sum_probs=58.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.|++.++|+.|++.|+++.++|+... +....+.+|+.... ..++.+.+. ....-.|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~p~ 145 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF--DAIVDPAEI-----------------KKGKPDPE 145 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC--cEEEehhhc-----------------CCCCCChH
Confidence 4789999999999999999999997533 34566777764211 000100000 01111122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeE
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 284 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGI 284 (450)
-=..+.+.+.-....++||||+.+|+.+-+.|++-.
T Consensus 146 ~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~ 181 (185)
T TIGR01990 146 IFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFA 181 (185)
T ss_pred HHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEE
Confidence 112333333333456999999999999999999853
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.0071 Score=54.86 Aligned_cols=93 Identities=12% Similarity=0.162 Sum_probs=59.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.|++.++++.|++.|+++.++|+. ..+..+.+.+|+..-. ..++.... .....|.
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f--~~v~~~~~-------------------~~~~kp~ 144 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF--DAIVDADE-------------------VKEGKPH 144 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC--CEeeehhh-------------------CCCCCCC
Confidence 58999999999999999999999987 5566777778874210 00000000 0011122
Q ss_pred hH--HHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeE
Q 013069 249 HK--YEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 284 (450)
Q Consensus 249 ~K--~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGI 284 (450)
.. ..+.+.+......++||||+.+|+.+-+.|++..
T Consensus 145 ~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 145 PETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFA 182 (185)
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeE
Confidence 11 1223333333456999999999999999998753
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.026 Score=50.48 Aligned_cols=102 Identities=16% Similarity=0.181 Sum_probs=65.6
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHH---HHHHHh---C--CCCCCCCCcccc-CCchhhhhhcCChhHHhh
Q 013069 167 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAK---ETGRRL---G--MGTNMYPSSALS-GQDRDESIVALPVDELIE 237 (450)
Q Consensus 167 ~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~---~ia~~l---g--i~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~ 237 (450)
+|.+.+++.++++++++.|++++++||+....+. .....+ | ++. ..++. +....... .
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~----g~li~~~g~~~~~~---------~ 91 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH----GPVLLSPDRLFAAL---------H 91 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC----ceEEEcCCcchhhh---------h
Confidence 4677899999999999999999999999988774 444442 2 321 11111 11000000 0
Q ss_pred hccceeecChh-hHHHHHHHHhh-----cCCEEEEecCCCCChHhHhhCCee
Q 013069 238 KADGFAGVFPE-HKYEIVKHLQA-----RNHICGMIGNGVNDAPALKKADIG 283 (450)
Q Consensus 238 ~~~v~a~~~P~-~K~~iV~~lq~-----~g~~v~~iGDG~ND~~al~~AdvG 283 (450)
. .+. .-.|+ .|...++.+.+ ....++.+|++.+|+.+.++++|.
T Consensus 92 ~-e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 92 R-EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred c-ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 0 111 12233 37777777765 346778899999999999999876
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.025 Score=51.47 Aligned_cols=112 Identities=8% Similarity=-0.044 Sum_probs=71.3
Q ss_pred EEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCC-cHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhh
Q 013069 159 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGD-QLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIE 237 (450)
Q Consensus 159 ~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD-~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (450)
.......-.-++.+++.++++.|++.|+++.++|+- ....+..+...+|+..... ..++...+.
T Consensus 35 ~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~---------------~~~~~~~Fd 99 (174)
T TIGR01685 35 IIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGK---------------TVPMHSLFD 99 (174)
T ss_pred eEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCC---------------cccHHHhce
Confidence 344555556678999999999999999999999976 8888888888888741000 000000000
Q ss_pred hccceeecChhhH--HHHHHHHhhc------CCEEEEecCCCCChHhHhhCCeeEEe
Q 013069 238 KADGFAGVFPEHK--YEIVKHLQAR------NHICGMIGNGVNDAPALKKADIGIAV 286 (450)
Q Consensus 238 ~~~v~a~~~P~~K--~~iV~~lq~~------g~~v~~iGDG~ND~~al~~AdvGIa~ 286 (450)
. -+.+.-.+..| ..+.+.+.+. ...|+||||...|+.+-+.|++-...
T Consensus 100 ~-iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 100 D-RIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred e-eeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 0 01111111112 2344544432 35699999999999999999987654
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.017 Score=59.39 Aligned_cols=116 Identities=18% Similarity=0.193 Sum_probs=71.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHH-HhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecCh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGR-RLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 247 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~-~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 247 (450)
++.+++.+.++.|++.|+++.|+|+.....+..... ..|+..-. ..++.+.+. ....-.|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F--d~ii~~d~v-----------------~~~KP~p 153 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF--SVIVGGDEV-----------------EKGKPSP 153 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC--CEEEehhhc-----------------CCCCCCH
Confidence 367999999999999999999999998887776554 56663210 001100000 0111122
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEE-ecc--chHHHhhccCEEecC
Q 013069 248 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-VAD--ATDAARSAADIVLTE 303 (450)
Q Consensus 248 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa-~~~--~~~~a~~aaDivl~~ 303 (450)
+-=..+++.+.-....|+||||+.+|+.+-+.|++... +.. ........+|.++.+
T Consensus 154 ~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~s 212 (382)
T PLN02940 154 DIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINS 212 (382)
T ss_pred HHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCC
Confidence 22234445554446779999999999999999998743 332 222233456666543
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.014 Score=52.76 Aligned_cols=88 Identities=9% Similarity=0.024 Sum_probs=60.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCc-HHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecCh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQ-LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 247 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~-~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 247 (450)
.+-+++.++++.|++.|+++.++|+.+ ...+..+.+.+|+... .+ ...-.|
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~-------~~---------------------~~KP~p 94 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVL-------PH---------------------AVKPPG 94 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEE-------cC---------------------CCCCCh
Confidence 567899999999999999999999988 5677777777776310 00 011112
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCC-CChHhHhhCCeeE
Q 013069 248 EHKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIGI 284 (450)
Q Consensus 248 ~~K~~iV~~lq~~g~~v~~iGDG~-ND~~al~~AdvGI 284 (450)
+-=..+++.+......++||||.. .|+.+-+.|++-.
T Consensus 95 ~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~ 132 (170)
T TIGR01668 95 CAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYT 132 (170)
T ss_pred HHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeE
Confidence 111223333333345699999998 7999999999853
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.013 Score=51.59 Aligned_cols=99 Identities=16% Similarity=0.172 Sum_probs=59.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcH---------------HHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQL---------------AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVD 233 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~---------------~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~ 233 (450)
++.+++.++++.|++.|+++.++|.... ..+..+.+.+|+....+ ........
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~---~~~~~~~~--------- 94 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGV---LFCPHHPA--------- 94 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEE---EECCCCCC---------
Confidence 3689999999999999999999998762 34556667777741000 00000000
Q ss_pred HHhhhccceeecChhhH--HHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEE
Q 013069 234 ELIEKADGFAGVFPEHK--YEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 285 (450)
Q Consensus 234 ~~~~~~~v~a~~~P~~K--~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa 285 (450)
.......|+-+ ..+++.+.-....|+||||...|+.+-+.+++-..
T Consensus 95 ------~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v 142 (147)
T TIGR01656 95 ------DNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAV 142 (147)
T ss_pred ------CCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEE
Confidence 00000012211 22333333334669999999999999999887543
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.028 Score=52.79 Aligned_cols=123 Identities=12% Similarity=0.096 Sum_probs=72.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.++++.|+ .|+++.++|+.....+...-+.+|+..-. + .++...+. ....-.|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f-d-~v~~~~~~-----------------~~~KP~p~ 154 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF-D-LLVISEQV-----------------GVAKPDVA 154 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc-C-EEEEECcc-----------------CCCCCCHH
Confidence 36899999999999 68999999998888888877888874210 0 00000000 00111111
Q ss_pred hHHHHHHHHhhc-CCEEEEecCCC-CChHhHhhCCee-EEec-cchH-HHhhccCEEecCCCchHHHHHH
Q 013069 249 HKYEIVKHLQAR-NHICGMIGNGV-NDAPALKKADIG-IAVA-DATD-AARSAADIVLTEPGLNVIITAV 313 (450)
Q Consensus 249 ~K~~iV~~lq~~-g~~v~~iGDG~-ND~~al~~AdvG-Ia~~-~~~~-~a~~aaDivl~~~~l~~i~~~I 313 (450)
-=..+++.+.-. ...|+||||+. +|+.+-+.|++- |.+. .+.. .....+|+++. ++..+..++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~--~~~el~~~l 222 (224)
T PRK09449 155 IFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVS--SLSELEQLL 222 (224)
T ss_pred HHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEEC--CHHHHHHHH
Confidence 112334444322 35799999998 799999999985 4443 2211 11124677663 366555543
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.018 Score=51.78 Aligned_cols=98 Identities=12% Similarity=0.054 Sum_probs=58.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCc---------------HHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQ---------------LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVD 233 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~---------------~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~ 233 (450)
++-+++.++|++|++.|+++.++|.-. ...+..+...+|+. +.. ++.+....
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~---fd~-ii~~~~~~--------- 95 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII---FDD-VLICPHFP--------- 95 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc---eeE-EEECCCCC---------
Confidence 366899999999999999999999752 34555666777774 100 00000000
Q ss_pred HHhhhccceeecChhhHHHHHHHH----hhcCCEEEEecCCCCChHhHhhCCeeEEe
Q 013069 234 ELIEKADGFAGVFPEHKYEIVKHL----QARNHICGMIGNGVNDAPALKKADIGIAV 286 (450)
Q Consensus 234 ~~~~~~~v~a~~~P~~K~~iV~~l----q~~g~~v~~iGDG~ND~~al~~AdvGIa~ 286 (450)
..... ...| |..++..+ ......++||||+.+|+.+-+.+++....
T Consensus 96 ----~~~~~-~~KP--~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~ 145 (161)
T TIGR01261 96 ----DDNCD-CRKP--KIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQ 145 (161)
T ss_pred ----CCCCC-CCCC--CHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEE
Confidence 00000 0012 22333332 22234599999999999999999987553
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.026 Score=54.84 Aligned_cols=87 Identities=13% Similarity=0.081 Sum_probs=59.2
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHH---HHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcccee
Q 013069 167 FDPPIHDSAETIRRALSLGLGVKMITGDQLAI---AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 243 (450)
Q Consensus 167 ~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~---a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a 243 (450)
..++-|++.+.++.|++.|+++.++|+..... +....+..|++..... .++.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d-------------------------~lll 170 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEE-------------------------HLLL 170 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcc-------------------------eEEe
Confidence 44578999999999999999999999987443 3355566787531110 1122
Q ss_pred ecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHh
Q 013069 244 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALK 278 (450)
Q Consensus 244 ~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~ 278 (450)
+-....|..-.+.+.+...+++++||..+|.....
T Consensus 171 r~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 171 KKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred CCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhhh
Confidence 21223455566666666778999999999986443
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.015 Score=51.09 Aligned_cols=90 Identities=22% Similarity=0.271 Sum_probs=57.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhh
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 249 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 249 (450)
..+++.+.++.|++.|+++.++|+-....+....+.. +... . ..++ +.+ ++...-.|+-
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~-f-~~i~-~~~-----------------~~~~Kp~~~~ 123 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY-F-DLIL-GSD-----------------EFGAKPEPEI 123 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc-C-cEEE-ecC-----------------CCCCCcCHHH
Confidence 4478999999999999999999999988888777765 3211 0 0011 000 0111112222
Q ss_pred HHHHHHHHhhcCCEEEEecCCCCChHhHhhCC
Q 013069 250 KYEIVKHLQARNHICGMIGNGVNDAPALKKAD 281 (450)
Q Consensus 250 K~~iV~~lq~~g~~v~~iGDG~ND~~al~~Ad 281 (450)
=..+.+.+.-.. .|++|||..+|+.+-+.|+
T Consensus 124 ~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 124 FLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 223334443334 7999999999998887764
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.038 Score=50.13 Aligned_cols=27 Identities=15% Similarity=0.278 Sum_probs=24.3
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcH
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQL 196 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~ 196 (450)
+.|++.++|+.|++.|+++.++|.-..
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 568999999999999999999997663
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.028 Score=51.89 Aligned_cols=95 Identities=15% Similarity=0.100 Sum_probs=58.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++-|++.++++.|++.|+++.++|+-... .....+.+|+.... . .++...+. .+..-.|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~f-d-~i~~s~~~-----------------~~~KP~~~ 164 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYF-D-FVVTSYEV-----------------GAEKPDPK 164 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhc-c-eEEeeccc-----------------CCCCCCHH
Confidence 47799999999999999999999986554 45666777763210 0 00000000 00111121
Q ss_pred hHHHHHHHHhhcCCEEEEecCCC-CChHhHhhCCee
Q 013069 249 HKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIG 283 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~-ND~~al~~AdvG 283 (450)
-=..+++.+.-....++||||+. +|+.+-+.|++-
T Consensus 165 ~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 165 IFQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 11223344433456799999997 899998888764
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.03 Score=52.10 Aligned_cols=138 Identities=17% Similarity=0.328 Sum_probs=84.5
Q ss_pred hHHHHHHHHHHHHHhcchhhhhh--ceecCCCCcCCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCC-eEEEEcCCcH
Q 013069 120 IGRKVNAVINKFAERGLRSLAVA--YQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGL-GVKMITGDQL 196 (450)
Q Consensus 120 ~~~~~~~~~~~~a~~Glr~l~vA--~~~~~~~~~~~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi-~v~mlTGD~~ 196 (450)
..+....+..++.++|-|.--+. ++.+ |+-|+..++|+.+++.|- .++++|--|.
T Consensus 55 Wne~M~rv~k~Lheqgv~~~~ik~~~r~i----------------------P~~Pgmv~lik~~ak~g~~eliIVSDaNs 112 (256)
T KOG3120|consen 55 WNELMDRVFKELHEQGVRIAEIKQVLRSI----------------------PIVPGMVRLIKSAAKLGCFELIIVSDANS 112 (256)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHhcC----------------------CCCccHHHHHHHHHhCCCceEEEEecCch
Confidence 34556677888888887765443 3433 478999999999999997 9999999998
Q ss_pred HHHHHHHHHhCCCCC---CC-CCccccCCchhhhhhcCChhHHhhhccceeecChhh--HHHHHHHHhhc-------CCE
Q 013069 197 AIAKETGRRLGMGTN---MY-PSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH--KYEIVKHLQAR-------NHI 263 (450)
Q Consensus 197 ~~a~~ia~~lgi~~~---~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~--K~~iV~~lq~~-------g~~ 263 (450)
.....+-+..|+..- ++ +...+..... +.-.+.. ..+- |...|.. |..++..++.. ..+
T Consensus 113 fFIe~~Lea~~~~d~F~~IfTNPa~~da~G~---L~v~pyH----~~hs-C~~CPsNmCKg~Vl~~~~~s~~~~gv~yer 184 (256)
T KOG3120|consen 113 FFIEEILEAAGIHDLFSEIFTNPACVDASGR---LLVRPYH----TQHS-CNLCPSNMCKGLVLDELVASQLKDGVRYER 184 (256)
T ss_pred hHHHHHHHHccHHHHHHHHhcCCcccCCCCc---EEeecCC----CCCc-cCcCchhhhhhHHHHHHHHHHhhcCCceee
Confidence 888888887776320 00 0000000000 0000000 0011 2233443 77777766542 237
Q ss_pred EEEecCCCCCh-HhHhhCCeeEEec
Q 013069 264 CGMIGNGVNDA-PALKKADIGIAVA 287 (450)
Q Consensus 264 v~~iGDG~ND~-~al~~AdvGIa~~ 287 (450)
+.++|||.||. |+++-..--++|-
T Consensus 185 ~iYvGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 185 LIYVGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred EEEEcCCCCCcCcchhcccCceecc
Confidence 99999999994 7777666666664
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.02 Score=50.59 Aligned_cols=95 Identities=14% Similarity=-0.031 Sum_probs=63.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++||++.+.++.|+ .++++.+.|.-....+..+.+.+++... +-..++.+.+. ...-|.
T Consensus 45 ~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~-~f~~i~~~~d~-------------------~~~KP~ 103 (148)
T smart00577 45 KKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKY-FGYRRLFRDEC-------------------VFVKGK 103 (148)
T ss_pred EECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCC-EeeeEEECccc-------------------cccCCe
Confidence 47999999999998 5799999999999999999998887421 10111111100 001121
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEE
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 285 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa 285 (450)
=...++.+......|++|||..+|..+-+.++|-|.
T Consensus 104 -~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 104 -YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred -EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 011233333445679999999999998877866654
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.039 Score=55.93 Aligned_cols=99 Identities=11% Similarity=0.038 Sum_probs=59.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCC---------------cHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCCh
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGD---------------QLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPV 232 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD---------------~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~ 232 (450)
-++.|++.++++.|++.|+++.|+|+- ....+..+.+..|+.- ....+......+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f---d~i~i~~~~~sd------- 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF---DEVLICPHFPED------- 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce---eeEEEeCCcCcc-------
Confidence 357899999999999999999999983 1334555666666631 000000000000
Q ss_pred hHHhhhccceeecChhhHHHHHHHH----hhcCCEEEEecCCCCChHhHhhCCeeEEe
Q 013069 233 DELIEKADGFAGVFPEHKYEIVKHL----QARNHICGMIGNGVNDAPALKKADIGIAV 286 (450)
Q Consensus 233 ~~~~~~~~v~a~~~P~~K~~iV~~l----q~~g~~v~~iGDG~ND~~al~~AdvGIa~ 286 (450)
+..++ .| |..++..+ .-....++||||+.+|..+-+.|++....
T Consensus 99 -------~~~~r-KP--~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~ 146 (354)
T PRK05446 99 -------NCSCR-KP--KTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIR 146 (354)
T ss_pred -------cCCCC-CC--CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEE
Confidence 00010 12 22333332 22346799999999999999999987543
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.21 Score=47.74 Aligned_cols=48 Identities=17% Similarity=0.255 Sum_probs=38.3
Q ss_pred EeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHH--HHHHHhCCC
Q 013069 162 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAK--ETGRRLGMG 209 (450)
Q Consensus 162 G~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~--~ia~~lgi~ 209 (450)
|.+.-...+-|++.++|+.|+++|+++.++|.-...... ...+.+|+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 555666778999999999999999999999986654443 456778875
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.062 Score=60.66 Aligned_cols=38 Identities=8% Similarity=-0.032 Sum_probs=32.0
Q ss_pred CCCcchHHHHHHH-HhCCCeEEEEcCCcHHHHHHHHHHh
Q 013069 169 PPIHDSAETIRRA-LSLGLGVKMITGDQLAIAKETGRRL 206 (450)
Q Consensus 169 ~lr~~~~~~I~~l-~~~Gi~v~mlTGD~~~~a~~ia~~l 206 (450)
.+.+++.+++++| ++.|+.|+++||+........-..+
T Consensus 616 ~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~ 654 (854)
T PLN02205 616 SPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPC 654 (854)
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCC
Confidence 5667899999997 7889999999999999888776443
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.058 Score=51.05 Aligned_cols=99 Identities=13% Similarity=0.079 Sum_probs=64.6
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhC---CCCCCCCCccccCCchhhhhhcCChhHHhhhcccee
Q 013069 167 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLG---MGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 243 (450)
Q Consensus 167 ~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lg---i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a 243 (450)
.-++.+++.+++++|++.|+++.++|.........+-+..+ +..- +. ..+. ..+..
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~------f~--------------~~fd-~~~g~ 151 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY------FS--------------GYFD-TTVGL 151 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh------cc--------------eEEE-eCccc
Confidence 34689999999999999999999999988876666655542 2100 00 0000 00111
Q ss_pred ecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEe
Q 013069 244 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 286 (450)
Q Consensus 244 ~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~ 286 (450)
.-.|+-=..+++.+.-....++|+||...|+.+-+.|++-...
T Consensus 152 KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 152 KTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred CCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 1122222344555554456799999999999999999997554
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.078 Score=45.55 Aligned_cols=39 Identities=10% Similarity=0.103 Sum_probs=34.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC-cHHHHHHHHHHhC
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGD-QLAIAKETGRRLG 207 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD-~~~~a~~ia~~lg 207 (450)
++.+++.+.++.|++.|+++.++|+. ....+..+.+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68899999999999999999999999 7777777766666
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=94.97 E-value=0.082 Score=49.71 Aligned_cols=101 Identities=12% Similarity=0.168 Sum_probs=58.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHH-HHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecCh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAK-ETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 247 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~-~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 247 (450)
++.+++.++|+.|++.|+++.++||-...... ...+..++.. .. ..++.+.+.+ .....-.|
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~-~f-~~i~~~~~~~---------------~~~~KP~p 140 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFS-LM-HHVVTGDDPE---------------VKQGKPAP 140 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHh-hC-CEEEECChhh---------------ccCCCCCc
Confidence 46899999999999999999999998764332 2222223321 00 0011110000 00001112
Q ss_pred hhHHHHHHHHh---hcCCEEEEecCCCCChHhHhhCCeeEEe
Q 013069 248 EHKYEIVKHLQ---ARNHICGMIGNGVNDAPALKKADIGIAV 286 (450)
Q Consensus 248 ~~K~~iV~~lq---~~g~~v~~iGDG~ND~~al~~AdvGIa~ 286 (450)
+-=...++.+. -....|+||||+..|+.+-+.|++....
T Consensus 141 ~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~ 182 (220)
T PLN02811 141 DIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVM 182 (220)
T ss_pred HHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEE
Confidence 11133344443 2346799999999999999999987543
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.13 Score=48.84 Aligned_cols=89 Identities=18% Similarity=0.287 Sum_probs=55.3
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHH---HHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcccee
Q 013069 167 FDPPIHDSAETIRRALSLGLGVKMITGDQLAI---AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 243 (450)
Q Consensus 167 ~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~---a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a 243 (450)
.-|.-+++.++++.|++.|++|+++||+.... ...--++.|++. .....+.+.+.. .
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~--~~~LiLR~~~d~------------------~ 177 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTG--WKHLILRGLEDS------------------N 177 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCC--cCeeeecCCCCC------------------C
Confidence 34788999999999999999999999999755 333334567652 111122110000 0
Q ss_pred ecChhhHHHHHHHHhhcC-CEEEEecCCCCChH
Q 013069 244 GVFPEHKYEIVKHLQARN-HICGMIGNGVNDAP 275 (450)
Q Consensus 244 ~~~P~~K~~iV~~lq~~g-~~v~~iGDG~ND~~ 275 (450)
.....-|...-+.+.+.| .+++.+||..+|..
T Consensus 178 ~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 178 KTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLL 210 (229)
T ss_pred chHhHHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence 000111656665666665 56788999999973
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.24 Score=46.22 Aligned_cols=37 Identities=16% Similarity=0.136 Sum_probs=34.1
Q ss_pred chHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 013069 173 DSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 209 (450)
Q Consensus 173 ~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~ 209 (450)
.+.+.+.+|+++|+.|+.+|.-........-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 5678999999999999999999999999999999987
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.043 Score=52.66 Aligned_cols=65 Identities=18% Similarity=0.179 Sum_probs=46.8
Q ss_pred cChhhHHHHHHHHhhc----CCEEEEecCCCCChHhHhhC--------CeeEEeccchHHHhhccCEEecCCCchHHHHH
Q 013069 245 VFPEHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKA--------DIGIAVADATDAARSAADIVLTEPGLNVIITA 312 (450)
Q Consensus 245 ~~P~~K~~iV~~lq~~----g~~v~~iGDG~ND~~al~~A--------dvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~ 312 (450)
..+.+|...++.+.+. ...++|+||+.||.+|++.+ ..+|+|+.+ ..+..|++++.+ ...+...
T Consensus 163 p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g--~~~~~A~~~~~~--~~~v~~~ 238 (244)
T TIGR00685 163 PRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSG--SKKTVAKFHLTG--PQQVLEF 238 (244)
T ss_pred eCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecC--CcCCCceEeCCC--HHHHHHH
Confidence 3456798888877654 34799999999999999988 578888533 235678888864 5555544
Q ss_pred H
Q 013069 313 V 313 (450)
Q Consensus 313 I 313 (450)
+
T Consensus 239 L 239 (244)
T TIGR00685 239 L 239 (244)
T ss_pred H
Confidence 4
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.11 Score=46.49 Aligned_cols=110 Identities=12% Similarity=0.242 Sum_probs=78.5
Q ss_pred HHHHHHHhcchhhhhhceecCCCCcCCCCCCcEEEEeccCCCC-CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH
Q 013069 127 VINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDP-PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR 205 (450)
Q Consensus 127 ~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~D~-lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~ 205 (450)
..+.+..+|.+.+.+=.++ +++ +..++ .-|++++=+..++.+|+++.++|.-+..-+...++.
T Consensus 19 ~~~~L~~~Gikgvi~DlDN-------------TLv---~wd~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~ 82 (175)
T COG2179 19 TPDILKAHGIKGVILDLDN-------------TLV---PWDNPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEK 82 (175)
T ss_pred CHHHHHHcCCcEEEEeccC-------------cee---cccCCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhh
Confidence 4677888999998875554 333 23322 557888889999999999999999999999999999
Q ss_pred hCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhhHHHHHHHHhh---cCCEEEEecCCC-CChHhHhhCC
Q 013069 206 LGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQA---RNHICGMIGNGV-NDAPALKKAD 281 (450)
Q Consensus 206 lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~---~g~~v~~iGDG~-ND~~al~~Ad 281 (450)
+|++- ++.-.-|--+ .+-+++++ ....|+||||.. .|+-+=..++
T Consensus 83 l~v~f------------------------------i~~A~KP~~~-~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G 131 (175)
T COG2179 83 LGVPF------------------------------IYRAKKPFGR-AFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAG 131 (175)
T ss_pred cCCce------------------------------eecccCccHH-HHHHHHHHcCCChhHEEEEcchhhhhhhcccccC
Confidence 99861 2222233333 34444544 456799999985 7887777666
Q ss_pred ee
Q 013069 282 IG 283 (450)
Q Consensus 282 vG 283 (450)
+-
T Consensus 132 ~~ 133 (175)
T COG2179 132 MR 133 (175)
T ss_pred cE
Confidence 54
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.15 Score=59.11 Aligned_cols=128 Identities=15% Similarity=0.144 Sum_probs=80.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
.+.+++.+.++.|+++|+++.++|+-....+....+.+|+...... .++...+. ....-.|+
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd-~iv~~~~~-----------------~~~KP~Pe 222 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFD-AIVSADAF-----------------ENLKPAPD 222 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCC-EEEECccc-----------------ccCCCCHH
Confidence 3679999999999999999999999999988888888888411111 11111000 00111122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCee-EEecc---chHHHhhccCEEecCCCchHHHHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVAD---ATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvG-Ia~~~---~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
-=..+++.+.-....|++|||..+|+.+-+.|++- |++.. ..+.....+|+++.+..--.+..++.
T Consensus 223 ~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~ 292 (1057)
T PLN02919 223 IFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDILT 292 (1057)
T ss_pred HHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHHh
Confidence 22344455554566799999999999999999984 33332 22333456788875543333444443
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.12 Score=46.66 Aligned_cols=94 Identities=6% Similarity=-0.001 Sum_probs=57.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHH------------HHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhh
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLA------------IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIE 237 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~------------~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (450)
+-+++.++++.|++.|+++.++|..... .+..+.+.+|+.. ..++.+. ..
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~----~~ii~~~-~~------------- 104 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI----QVLAATH-AG------------- 104 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE----EEEEecC-CC-------------
Confidence 3489999999999999999999975542 3456677788741 0011000 00
Q ss_pred hccceeecChhhHHHHHHHHh--hcCCEEEEecCCC--------CChHhHhhCCeeE
Q 013069 238 KADGFAGVFPEHKYEIVKHLQ--ARNHICGMIGNGV--------NDAPALKKADIGI 284 (450)
Q Consensus 238 ~~~v~a~~~P~~K~~iV~~lq--~~g~~v~~iGDG~--------ND~~al~~AdvGI 284 (450)
.+..-.|+-=..+++.+. -....++||||.. +|+.+-+.|++-.
T Consensus 105 ---~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 105 ---LYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred ---CCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 001111111123334443 2335699999986 6999888888654
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=94.17 E-value=0.43 Score=48.44 Aligned_cols=62 Identities=21% Similarity=0.229 Sum_probs=43.4
Q ss_pred hHHHHHHHHhhc-------CCEEEEecCCCCChHhHhhC-----CeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 249 HKYEIVKHLQAR-------NHICGMIGNGVNDAPALKKA-----DIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 249 ~K~~iV~~lq~~-------g~~v~~iGDG~ND~~al~~A-----dvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
+|...|+.|.+. +..++++||...|-.||+.. ++||.+|.... ...|++.|. +.+.+...+.
T Consensus 283 dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k--~T~A~y~L~--dp~eV~~fL~ 356 (366)
T PLN03017 283 DKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK--DTDASYSLQ--DPSEVMDFLA 356 (366)
T ss_pred CHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC--CCcceEeCC--CHHHHHHHHH
Confidence 899999888753 23689999999999999855 57777774211 246777774 4555555443
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.85 E-value=0.12 Score=48.37 Aligned_cols=97 Identities=12% Similarity=0.171 Sum_probs=61.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.++++.| ++++.++|+.....+...-+..|+.... +..++.+.+. ....-.|+
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F-~~~v~~~~~~-----------------~~~KP~p~ 146 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYF-PDKLFSGYDI-----------------QRWKPDPA 146 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhC-cceEeeHHhc-----------------CCCCCChH
Confidence 3568999999988 5899999999988888877778874211 0001110000 00011122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEe
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 286 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~ 286 (450)
-=..+.+.+.-....|+||||..+|+.+=+.|++....
T Consensus 147 ~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 147 LMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 22233344433345699999999999999999988754
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=93.73 E-value=0.12 Score=51.78 Aligned_cols=91 Identities=13% Similarity=0.060 Sum_probs=66.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH----hCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceee
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR----LGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 244 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~----lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~ 244 (450)
++.+++.++|+.|++.|+.+.++|.-+...+..+.+. +|+.... .+..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f----------------------------~~~~ 82 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF----------------------------DARS 82 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe----------------------------eEEE
Confidence 3578999999999999999999999999999998887 6663110 0111
Q ss_pred cChhhHHHHHH----HHhhcCCEEEEecCCCCChHhHhhCCeeEEec
Q 013069 245 VFPEHKYEIVK----HLQARNHICGMIGNGVNDAPALKKADIGIAVA 287 (450)
Q Consensus 245 ~~P~~K~~iV~----~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~ 287 (450)
..+..|...++ .+.-....++||||...|+.+.+.+...+.+-
T Consensus 83 ~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 83 INWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred EecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 22334444443 33333467999999999999999988876553
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=93.71 E-value=0.12 Score=47.94 Aligned_cols=96 Identities=10% Similarity=0.007 Sum_probs=55.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHH--HHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccc-eeec
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAI--AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADG-FAGV 245 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~--a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v-~a~~ 245 (450)
++.|++.++++.|++.|+++.++|...... ........++.... . .++.. ..+ ...-
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~f-d-~v~~s------------------~~~~~~KP 153 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALF-D-AVVES------------------CLEGLRKP 153 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhC-C-EEEEe------------------eecCCCCC
Confidence 578999999999999999999999865432 22222223331100 0 00000 000 0111
Q ss_pred ChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeE
Q 013069 246 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 284 (450)
Q Consensus 246 ~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGI 284 (450)
.|+-=..+++.+.-....++||||...|+.+-+.|++-.
T Consensus 154 ~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 154 DPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred CHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEE
Confidence 122112333444434466999999999999999999854
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.35 E-value=0.22 Score=46.01 Aligned_cols=98 Identities=7% Similarity=-0.029 Sum_probs=57.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH-hCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecCh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR-LGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 247 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~-lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 247 (450)
++.|++.++++.|++.|+++.++|.-+.......... .++.... . .++...+. ....-.|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~f-d-~v~~s~~~-----------------~~~KP~p 144 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAA-D-HIYLSQDL-----------------GMRKPEA 144 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhc-C-EEEEeccc-----------------CCCCCCH
Confidence 3689999999999999999999999776544332211 2221100 0 00000000 0001111
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEE
Q 013069 248 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 285 (450)
Q Consensus 248 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa 285 (450)
+-=..+++.+.-....+++|||...|+.+-+.+++-..
T Consensus 145 ~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i 182 (199)
T PRK09456 145 RIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSI 182 (199)
T ss_pred HHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEE
Confidence 11123344444445679999999999999999998643
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=91.33 E-value=0.37 Score=43.71 Aligned_cols=97 Identities=11% Similarity=0.063 Sum_probs=60.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhh
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 249 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 249 (450)
+.+++.+++++|+ .+++++|+-....+....+.+|+.... + .++...+.... ..++.-.|+-
T Consensus 85 ~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~f-d-~i~~~~~~~~~-------------~~~~KP~p~~ 146 (184)
T TIGR01993 85 PDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCF-D-GIFCFDTANPD-------------YLLPKPSPQA 146 (184)
T ss_pred CCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhh-C-eEEEeecccCc-------------cCCCCCCHHH
Confidence 6789999999987 478999999988888888999884210 0 01100000000 0000112222
Q ss_pred HHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeE
Q 013069 250 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 284 (450)
Q Consensus 250 K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGI 284 (450)
=..+++.+......++||||...|+.+=+.+++..
T Consensus 147 ~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 147 YEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 23444555555677999999999999999888754
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=91.17 E-value=0.39 Score=45.71 Aligned_cols=89 Identities=22% Similarity=0.212 Sum_probs=54.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHH---HHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeec
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAI---AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 245 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~---a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~ 245 (450)
++=|++.+.++.+++.|++|+.+||++... ...-.++.|+... ....+.+.... -...
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~--~~l~lr~~~~~-----------------~~~~ 175 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW--DHLILRPDKDP-----------------SKKS 175 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB--SCGEEEEESST-----------------SS--
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc--chhcccccccc-----------------cccc
Confidence 456789999999999999999999998642 2233455675421 11111110000 0000
Q ss_pred ChhhHHHHHHHHhhcC-CEEEEecCCCCChHh
Q 013069 246 FPEHKYEIVKHLQARN-HICGMIGNGVNDAPA 276 (450)
Q Consensus 246 ~P~~K~~iV~~lq~~g-~~v~~iGDG~ND~~a 276 (450)
..+-|...-+.+.+.| ++++++||..+|...
T Consensus 176 ~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 176 AVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp ----SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred ccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 1223777778888885 567889999999875
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.93 E-value=0.49 Score=42.86 Aligned_cols=91 Identities=14% Similarity=0.149 Sum_probs=58.3
Q ss_pred hHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhhHHHH
Q 013069 174 SAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEI 253 (450)
Q Consensus 174 ~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~i 253 (450)
..++++.|++. +++.++|+.....+....+.+|+..-. ..++...+. ....-.|+-=...
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~f--d~i~~~~~~-----------------~~~KP~p~~~~~~ 151 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYF--DAVVAADDV-----------------QHHKPAPDTFLRC 151 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHc--eEEEehhhc-----------------cCCCCChHHHHHH
Confidence 36889999865 899999999999999999999885211 011110000 0111122222333
Q ss_pred HHHHhhcCCEEEEecCCCCChHhHhhCCeeE
Q 013069 254 VKHLQARNHICGMIGNGVNDAPALKKADIGI 284 (450)
Q Consensus 254 V~~lq~~g~~v~~iGDG~ND~~al~~AdvGI 284 (450)
.+.+......|++|||..+|+.+-+.|++-.
T Consensus 152 ~~~~~~~~~~~l~igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 152 AQLMGVQPTQCVVFEDADFGIQAARAAGMDA 182 (188)
T ss_pred HHHcCCCHHHeEEEeccHhhHHHHHHCCCEE
Confidence 4444434456899999999999999998763
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=90.89 E-value=1.2 Score=40.25 Aligned_cols=107 Identities=16% Similarity=0.153 Sum_probs=76.3
Q ss_pred HHHhcchhhhhhceecCCCCcCCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCe--EEEEcCC-------cHHHHHH
Q 013069 131 FAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLG--VKMITGD-------QLAIAKE 201 (450)
Q Consensus 131 ~a~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~--v~mlTGD-------~~~~a~~ 201 (450)
+...|.+.+.+=.+. ++ ...=++.+-++..+.+++|++.+.. |+++|-- +...|..
T Consensus 36 Lk~~Gik~li~DkDN-------------TL--~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~ 100 (168)
T PF09419_consen 36 LKKKGIKALIFDKDN-------------TL--TPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA 100 (168)
T ss_pred hhhcCceEEEEcCCC-------------CC--CCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH
Confidence 566787777765443 11 1234667889999999999998874 9999886 4788999
Q ss_pred HHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhhHHHHHHHHhhc-----CCEEEEecCCC-CChH
Q 013069 202 TGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQAR-----NHICGMIGNGV-NDAP 275 (450)
Q Consensus 202 ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~-----g~~v~~iGDG~-ND~~ 275 (450)
+.+.+|++- -.+..--|.-..++.+.++.. .+.++||||-. .|+-
T Consensus 101 ~~~~lgIpv-----------------------------l~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl 151 (168)
T PF09419_consen 101 LEKALGIPV-----------------------------LRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVL 151 (168)
T ss_pred HHHhhCCcE-----------------------------EEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHH
Confidence 999999851 012334676666788888755 56799999974 7776
Q ss_pred hHhhCC
Q 013069 276 ALKKAD 281 (450)
Q Consensus 276 al~~Ad 281 (450)
|=...+
T Consensus 152 ~gN~~G 157 (168)
T PF09419_consen 152 MGNRMG 157 (168)
T ss_pred HhhccC
Confidence 655555
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=90.84 E-value=0.36 Score=46.40 Aligned_cols=48 Identities=27% Similarity=0.365 Sum_probs=38.9
Q ss_pred eecCh--hhHHHHHHHHhhcCCEEEEecC----CCCChHhHhh-CCeeEEeccchH
Q 013069 243 AGVFP--EHKYEIVKHLQARNHICGMIGN----GVNDAPALKK-ADIGIAVADATD 291 (450)
Q Consensus 243 a~~~P--~~K~~iV~~lq~~g~~v~~iGD----G~ND~~al~~-AdvGIa~~~~~~ 291 (450)
-++.| .+|+..++.|+ ....|+++|| |.||.+||+. .-.||++.+-.+
T Consensus 181 iDi~~~gvnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~ 235 (245)
T PLN02423 181 FDVFPQGWDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD 235 (245)
T ss_pred EEEeeCCCCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence 34444 37999999999 7788999999 8999999996 778999865433
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=90.63 E-value=3 Score=44.34 Aligned_cols=98 Identities=15% Similarity=0.065 Sum_probs=61.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH-hCCCCCC----C--CCccccCCchhhhhhcCChhHHhhhccce
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR-LGMGTNM----Y--PSSALSGQDRDESIVALPVDELIEKADGF 242 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~-lgi~~~~----~--~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ 242 (450)
+++++.+ .+++.|. ++++|+-....+..+|++ +|+..-. . ....++|.-.. -
T Consensus 111 l~~~a~~---~~~~~g~-~vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g-----------------~ 169 (497)
T PLN02177 111 VHPETWR---VFNSFGK-RYIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKK-----------------P 169 (497)
T ss_pred cCHHHHH---HHHhCCC-EEEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecC-----------------C
Confidence 4555444 4456775 499999999999999987 8986210 0 01111110000 0
Q ss_pred eecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEecc
Q 013069 243 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVAD 288 (450)
Q Consensus 243 a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~ 288 (450)
..+.-++|..-++..........+.||+.||.|||+.|+-+.+++.
T Consensus 170 ~~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 170 GVLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred CCCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 0134466877776433211223789999999999999999999975
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=90.52 E-value=0.5 Score=43.37 Aligned_cols=92 Identities=11% Similarity=0.077 Sum_probs=53.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCC--CCCccccCCchhhhhhcCChhHHhhhccceeecCh
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNM--YPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 247 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 247 (450)
+.|++.++++.|++.+ +.+++|.-+.......-+.+++..-. +-..+ +.++...
T Consensus 75 ~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i-----------------------~~~~~~~ 130 (197)
T PHA02597 75 AYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEV-----------------------LMCGHDE 130 (197)
T ss_pred CCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEE-----------------------EEeccCc
Confidence 6899999999999875 56677765544443344555553100 00000 1111111
Q ss_pred hhHHHHHHHH-hhc-CCEEEEecCCCCChHhHhhC--CeeEEe
Q 013069 248 EHKYEIVKHL-QAR-NHICGMIGNGVNDAPALKKA--DIGIAV 286 (450)
Q Consensus 248 ~~K~~iV~~l-q~~-g~~v~~iGDG~ND~~al~~A--dvGIa~ 286 (450)
.|.+++... ++. ...++||||..+|+.+-++| |+-...
T Consensus 131 -~kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i~ 172 (197)
T PHA02597 131 -SKEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVIH 172 (197)
T ss_pred -ccHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEEE
Confidence 133433332 222 34688999999999999999 986443
|
2 hypothetical protein; Provisional |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=90.49 E-value=0.64 Score=46.32 Aligned_cols=48 Identities=25% Similarity=0.304 Sum_probs=38.7
Q ss_pred EeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHH---HHhCCC
Q 013069 162 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG---RRLGMG 209 (450)
Q Consensus 162 G~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia---~~lgi~ 209 (450)
|++.-.+.+=+++.++|++|++.|++++++|+....+...+. +.+|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 555555677799999999999999999999999977666666 456663
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=88.09 E-value=0.38 Score=39.53 Aligned_cols=48 Identities=21% Similarity=0.304 Sum_probs=35.6
Q ss_pred EeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHH---HHhCCC
Q 013069 162 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG---RRLGMG 209 (450)
Q Consensus 162 G~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia---~~lgi~ 209 (450)
|++...+.+=|++.++|+.|++.|++++++|.....+...++ +.+|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 455557778899999999999999999999998866655554 456664
|
... |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.02 E-value=1.9 Score=40.69 Aligned_cols=100 Identities=15% Similarity=0.171 Sum_probs=71.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecCh
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 247 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 247 (450)
.++.+++.+.+++|++.|+.+.+.|+-....+..+...+|+.... ..++.+.+.. -..-.|
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f--~~~v~~~dv~-----------------~~KP~P 145 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYF--DVIVTADDVA-----------------RGKPAP 145 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhc--chhccHHHHh-----------------cCCCCC
Confidence 368999999999999999999999999999999999999985311 0111110000 012223
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEe
Q 013069 248 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 286 (450)
Q Consensus 248 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~ 286 (450)
+-=....+.|.-....|+.|.|..|.+.|-++|+.-+-.
T Consensus 146 d~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv~ 184 (221)
T COG0637 146 DIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVG 184 (221)
T ss_pred HHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEEE
Confidence 333445555555567899999999999999999987544
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=86.67 E-value=3.6 Score=40.06 Aligned_cols=43 Identities=16% Similarity=0.329 Sum_probs=32.6
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHH---HHhCCC
Q 013069 167 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG---RRLGMG 209 (450)
Q Consensus 167 ~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia---~~lgi~ 209 (450)
..|.=|++.+..+.+++.|++|+++||+....-..+. ++.|+.
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~ 188 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYH 188 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCC
Confidence 4567789999999999999999999999864322222 345664
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=86.49 E-value=1.9 Score=40.93 Aligned_cols=91 Identities=11% Similarity=0.074 Sum_probs=53.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++-+++.++++.|++. +++.++|..+... +..|+..-. . .++... -+....|.
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~~-----~~~gl~~~f-d-~i~~~~-------------------~~~~~KP~ 165 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQP-----ELFGLGDYF-E-FVLRAG-------------------PHGRSKPF 165 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCchH-----HHCCcHHhh-c-eeEecc-------------------cCCcCCCc
Confidence 4668999999999875 8999998866541 445553100 0 000000 00011121
Q ss_pred h--HHHHHHHHhhcCCEEEEecCC-CCChHhHhhCCeeEEe
Q 013069 249 H--KYEIVKHLQARNHICGMIGNG-VNDAPALKKADIGIAV 286 (450)
Q Consensus 249 ~--K~~iV~~lq~~g~~v~~iGDG-~ND~~al~~AdvGIa~ 286 (450)
- =..+++.+.-....++||||. ..|+.+=+.||+-...
T Consensus 166 p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~ 206 (238)
T PRK10748 166 SDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACW 206 (238)
T ss_pred HHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEE
Confidence 1 122233333345679999999 5999999999987554
|
|
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=86.18 E-value=0.39 Score=43.05 Aligned_cols=93 Identities=15% Similarity=0.029 Sum_probs=61.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecCh
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 247 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 247 (450)
=..||++.+.++.|.+. +.+++.|......|..+...++....... .++ +.....
T Consensus 41 v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~-~~l-----------------------~r~~~~ 95 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVIS-RRL-----------------------YRESCV 95 (162)
T ss_pred EEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEe-EEE-----------------------EccccE
Confidence 35899999999999987 99999999999999999999886421110 000 000000
Q ss_pred hhHHHHHHHHh---hcCCEEEEecCCCCChHhHhhCCeeEE
Q 013069 248 EHKYEIVKHLQ---ARNHICGMIGNGVNDAPALKKADIGIA 285 (450)
Q Consensus 248 ~~K~~iV~~lq---~~g~~v~~iGDG~ND~~al~~AdvGIa 285 (450)
..|..+++.|. .....|+||||...|..+-+.++|-|.
T Consensus 96 ~~~~~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~ 136 (162)
T TIGR02251 96 FTNGKYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIK 136 (162)
T ss_pred EeCCCEEeEchhcCCChhhEEEEeCChhhhccCccCEeecC
Confidence 00111333333 334579999999988876666655543
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=85.81 E-value=4.5 Score=36.13 Aligned_cols=103 Identities=20% Similarity=0.178 Sum_probs=66.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHH---HHh-----CCCCCCCCCccccCCchhhhhhcCChhHHhhhc
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG---RRL-----GMGTNMYPSSALSGQDRDESIVALPVDELIEKA 239 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia---~~l-----gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 239 (450)
|-.++++.+..+.+++.|++++-+|++..--+..+- ... +++. +.++...+.. . .. ..-
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~----Gpv~~sP~~l--~-----~a--l~r 92 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPD----GPVLLSPDSL--F-----SA--LHR 92 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCC----CCEEECCcch--h-----hh--hhc
Confidence 689999999999999999999999999965444332 333 3321 1111110000 0 00 000
Q ss_pred cceeecChhhHHHHHHHHhhc-----CCEEEEecCCCCChHhHhhCCee
Q 013069 240 DGFAGVFPEHKYEIVKHLQAR-----NHICGMIGNGVNDAPALKKADIG 283 (450)
Q Consensus 240 ~v~a~~~P~~K~~iV~~lq~~-----g~~v~~iGDG~ND~~al~~AdvG 283 (450)
++..+-.-+.|...++.++.. ...++..|...+|+.+.++++|.
T Consensus 93 Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 93 EVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred cccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 122333345688888888764 35688899999999999999876
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=84.24 E-value=3.9 Score=37.99 Aligned_cols=97 Identities=12% Similarity=0.173 Sum_probs=60.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++-+++.++++.++.. ++++++|--.........+++|+... .+..+..+ -....-|+
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~-Fd~v~~s~--------------------~~g~~KP~ 156 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDY-FDAVFISE--------------------DVGVAKPD 156 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhh-hheEEEec--------------------ccccCCCC
Confidence 3678899999999988 99999999888888888999996421 11111110 01112233
Q ss_pred hH--HHHHHHHhhcCCEEEEecCC-CCChHhHhhCCee-EEec
Q 013069 249 HK--YEIVKHLQARNHICGMIGNG-VNDAPALKKADIG-IAVA 287 (450)
Q Consensus 249 ~K--~~iV~~lq~~g~~v~~iGDG-~ND~~al~~AdvG-Ia~~ 287 (450)
.+ ..+.+.+.-....++||||. .||+..-+.+|.- |-+.
T Consensus 157 ~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~ 199 (229)
T COG1011 157 PEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWIN 199 (229)
T ss_pred cHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEEC
Confidence 22 23334444445679999997 4885555566553 4443
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=83.19 E-value=2.2 Score=42.04 Aligned_cols=41 Identities=7% Similarity=-0.016 Sum_probs=37.9
Q ss_pred CC-cchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC
Q 013069 170 PI-HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 210 (450)
Q Consensus 170 lr-~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~ 210 (450)
+| |++.+++++|++.|+++.++|+-....+...-+.+|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 56 999999999999999999999999999999999999973
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=82.61 E-value=6.4 Score=39.81 Aligned_cols=106 Identities=14% Similarity=0.118 Sum_probs=64.7
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHh-C-------CCCCCCCCccccCCchh----------------hh
Q 013069 171 IHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL-G-------MGTNMYPSSALSGQDRD----------------ES 226 (450)
Q Consensus 171 r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~l-g-------i~~~~~~~~~l~~~~~~----------------~~ 226 (450)
-|++.+.+++|++.|+++.++|+-....+..+.+.+ | +.. .. ..++.+.... ..
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~-yF-D~IIt~a~KP~FF~~~~pf~~v~~~~g~ 263 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRD-YF-DVVIVDARKPGFFTEGRPFRQVDVETGS 263 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHh-hC-cEEEeCCCCCcccCCCCceEEEeCCCCc
Confidence 579999999999999999999999999999998886 6 221 00 1111111100 00
Q ss_pred hhcCChhHHhhhccceeecChhhHHHHHHHHhhcCCEEEEecCCC-CChHhHh-hCCe
Q 013069 227 IVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGV-NDAPALK-KADI 282 (450)
Q Consensus 227 ~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~-ND~~al~-~Adv 282 (450)
+....... ++...+|+.-+- ..+.+.+...+..|++|||.+ .|+-.-+ .++.
T Consensus 264 ~~~~~~~~-l~~g~vY~gGn~---~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw 317 (343)
T TIGR02244 264 LKWGEVDG-LEPGKVYSGGSL---KQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGW 317 (343)
T ss_pred ccCCcccc-ccCCCeEeCCCH---HHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCc
Confidence 00000011 233345554433 345566667789999999985 7776555 4543
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=82.26 E-value=1.9 Score=38.45 Aligned_cols=85 Identities=15% Similarity=0.078 Sum_probs=51.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.|++.++++ ++.++|.-+........+.+|+..-. ..++...+. ....-.|+
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~~-----------------~~~KP~p~ 143 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYF--DRAFSVDTV-----------------RAYKPDPV 143 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHH--hhhccHhhc-----------------CCCCCCHH
Confidence 47889999998 37789998888888888888874210 000100000 01111222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhh
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKK 279 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~ 279 (450)
-=..+.+.+.-....|+||||+..|+.+-++
T Consensus 144 ~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~ 174 (175)
T TIGR01493 144 VYELVFDTVGLPPDRVLMVAAHQWDLIGARK 174 (175)
T ss_pred HHHHHHHHHCCCHHHeEeEecChhhHHHHhc
Confidence 1134445554455679999999999876554
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=82.00 E-value=1.5 Score=42.23 Aligned_cols=45 Identities=20% Similarity=0.316 Sum_probs=39.5
Q ss_pred EeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHh
Q 013069 162 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL 206 (450)
Q Consensus 162 G~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~l 206 (450)
|.+.-.+.+-|++.++|+.|++.|++++++|+....+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 566666788899999999999999999999999998888887765
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=81.84 E-value=2.6 Score=40.51 Aligned_cols=48 Identities=8% Similarity=0.016 Sum_probs=38.7
Q ss_pred EeccCCCCCCcchHHHHHHHHhCCCeEEEEcC---CcHHHHHHHHHHhCCC
Q 013069 162 GLIPLFDPPIHDSAETIRRALSLGLGVKMITG---DQLAIAKETGRRLGMG 209 (450)
Q Consensus 162 G~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTG---D~~~~a~~ia~~lgi~ 209 (450)
|.+.-.+.+-+++.++|++|++.|++++++|| ..........+.+|+.
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~ 60 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIP 60 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 44445566667999999999999999999996 6677777777788875
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=81.07 E-value=16 Score=35.02 Aligned_cols=132 Identities=18% Similarity=0.209 Sum_probs=69.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCC---chhhhhhcCChhHHhhhccceee
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQ---DRDESIVALPVDELIEKADGFAG 244 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~v~a~ 244 (450)
-.+|+++.+.++.|++.+|.+.|+|+.=-....++-++-|...++ ..++... +.+..+. .|..
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~N--v~VvSN~M~Fd~~g~l~------------gF~~ 154 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPN--VKVVSNFMDFDEDGVLV------------GFKG 154 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTT--EEEEEE-EEE-TTSBEE------------EE-S
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCC--eEEEeeeEEECCcceEe------------ecCC
Confidence 358999999999999999999999998888888888887654221 1111100 0000000 0100
Q ss_pred --cChhhHHH-------HHHHHhhcCCEEEEecCCCCChHhHhhC---CeeEEec--cc-h----HHHhhccCEEecCCC
Q 013069 245 --VFPEHKYE-------IVKHLQARNHICGMIGNGVNDAPALKKA---DIGIAVA--DA-T----DAARSAADIVLTEPG 305 (450)
Q Consensus 245 --~~P~~K~~-------iV~~lq~~g~~v~~iGDG~ND~~al~~A---dvGIa~~--~~-~----~~a~~aaDivl~~~~ 305 (450)
..+-.|-. .-+.++ ....|+-.||..-|+.|-.-. +.-+.+| |. . +.-.++=|||+.++.
T Consensus 155 ~lIH~~NKn~~~l~~~~~~~~~~-~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~ 233 (246)
T PF05822_consen 155 PLIHTFNKNESALEDSPYFKQLK-KRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQ 233 (246)
T ss_dssp S---TT-HHHHHHTTHHHHHCTT-T--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--
T ss_pred CceEEeeCCcccccCchHHHHhc-cCCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCC
Confidence 01112221 112222 245689999999999997655 4445555 32 2 233567799999887
Q ss_pred chHHHHHHH
Q 013069 306 LNVIITAVL 314 (450)
Q Consensus 306 l~~i~~~I~ 314 (450)
--.++..|.
T Consensus 234 tm~v~~~il 242 (246)
T PF05822_consen 234 TMDVPNAIL 242 (246)
T ss_dssp B-HHHHHHH
T ss_pred CchHHHHHH
Confidence 555555443
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=80.56 E-value=6.3 Score=38.45 Aligned_cols=48 Identities=21% Similarity=0.265 Sum_probs=35.3
Q ss_pred EeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHH---HHHHhCCC
Q 013069 162 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKE---TGRRLGMG 209 (450)
Q Consensus 162 G~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~---ia~~lgi~ 209 (450)
|++.-.+.+-+++.++|++|++.|++++++|+....+... --+.+|+.
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 4444456677889999999999999999999976443333 23456764
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=80.46 E-value=2.1 Score=41.35 Aligned_cols=48 Identities=23% Similarity=0.376 Sum_probs=36.3
Q ss_pred EeccCCCC----CCcchHHHHHHHHhCCCeEEEEcCCcHHHH---HHHHHHhCCC
Q 013069 162 GLIPLFDP----PIHDSAETIRRALSLGLGVKMITGDQLAIA---KETGRRLGMG 209 (450)
Q Consensus 162 G~i~l~D~----lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a---~~ia~~lgi~ 209 (450)
|.+.-.+. +-|++.++|++|++.|++++++||....+. ....+.+|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 44444455 788999999999999999999999877653 3444556764
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=80.18 E-value=3.2 Score=40.95 Aligned_cols=40 Identities=3% Similarity=-0.135 Sum_probs=36.5
Q ss_pred CC-cchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 013069 170 PI-HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 209 (450)
Q Consensus 170 lr-~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~ 209 (450)
+| |++.+++++|+++|+++.++|+.....+....+.+|+.
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~ 188 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLE 188 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCC
Confidence 46 89999999999999999999988888889999999996
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 450 | ||||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 1e-134 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 3e-53 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 3e-19 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 3e-19 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 3e-19 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 5e-19 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 9e-12 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 7e-11 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 5e-10 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 2e-08 | ||
| 2o98_P | 52 | Structure Of The 14-3-3 H+-Atpase Plant Complex Len | 1e-06 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 1e-06 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 1e-06 | ||
| 3m50_P | 31 | Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY E | 2e-05 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 3e-04 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 3e-04 |
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|2O98|P Chain P, Structure Of The 14-3-3 H+-Atpase Plant Complex Length = 52 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|3M50|P Chain P, Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY EPIBESTAT Length = 31 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 450 | |||
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 1e-162 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 4e-04 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 1e-147 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 2e-50 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 5e-50 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 2e-44 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 8e-30 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 1e-29 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 1e-27 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 3e-27 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 8e-27 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 3e-26 | |
| 2o98_P | 52 | H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, | 3e-22 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 9e-13 | |
| 3m50_P | 31 | N.plumbaginifolia H+-translocating ATPase mRNA; al | 2e-11 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 3e-07 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 7e-07 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 1e-06 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 1e-06 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 1e-06 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 2e-06 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 2e-06 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 3e-06 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 3e-06 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 4e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-05 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 4e-05 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 2e-04 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 2e-04 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 2e-04 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 2e-04 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 3e-04 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 9e-04 |
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 478 bits (1233), Expect = e-162
Identities = 247/326 (75%), Positives = 283/326 (86%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIV 60
MAGMDVLC DKTGTLTLNKL+VDKNL+E+F GV+ D V+L AA AS+VEN D IDAA+V
Sbjct: 320 MAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDAIDAAMV 379
Query: 61 GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKI 120
GMLADPKEARA I+EVHFLPF+P KRTALTYID G HRV+KG+PEQIL L + +
Sbjct: 380 GMLADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKASNDL 439
Query: 121 GRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRR 180
+KV ++I+K+AERGLRSLAVA Q VPE +KES G+PW+F+GL+PLFDPP HDSAETIRR
Sbjct: 440 SKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGLLPLFDPPRHDSAETIRR 499
Query: 181 ALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240
AL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL G +D ++ ++PV+ELIEKAD
Sbjct: 500 ALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKAD 559
Query: 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 300
GFAGVFPEHKYEIVK LQ R HI GM G+GVNDAPALKKADIGIAVADATDAAR A+DIV
Sbjct: 560 GFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARGASDIV 619
Query: 301 LTEPGLNVIITAVLISRAIFQRMRNY 326
LTEPGL+VII+AVL SRAIFQRM+NY
Sbjct: 620 LTEPGLSVIISAVLTSRAIFQRMKNY 645
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 4e-04
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 359 QTAFTSKKDFGKEERELLWAHAQRTLH 385
+TAFT KKD+GKEERE W H
Sbjct: 857 KTAFTMKKDYGKEEREAQWMRGSHHHH 883
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 440 bits (1134), Expect = e-147
Identities = 134/335 (40%), Positives = 192/335 (57%), Gaps = 21/335 (6%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVEN--LDVIDAA 58
+AG+++LC DKTGTLT NKL++ GVD + ++L A A+ + +D ID A
Sbjct: 369 LAGVEILCSDKTGTLTKNKLSLHDPYT---VAGVDPEDLMLTACLAASRKKKGIDAIDKA 425
Query: 59 IVGMLADPKEARADIQE---VHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLH 115
+ L A++ + + + F PFDP K+ +G+ KG+P +L +
Sbjct: 426 FLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVE 485
Query: 116 NKSKIG----RKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPI 171
I + + +FA RG RSL VA + W+ +G++P DPP
Sbjct: 486 EDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG--------EGSWEILGIMPCMDPPR 537
Query: 172 HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALP 231
HD+ +T+ A +LGL +KM+TGD + IA+ET R+LG+GTN+Y + L + +
Sbjct: 538 HDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGGD-MPGSE 596
Query: 232 VDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATD 291
V + +E ADGFA VFP+HKY +V+ LQ R ++ M G+GVNDAP+LKKAD GIAV ++D
Sbjct: 597 VYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVEGSSD 656
Query: 292 AARSAADIVLTEPGLNVIITAVLISRAIFQRMRNY 326
AARSAADIV PGL II A+ SR IF RM Y
Sbjct: 657 AARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAY 691
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 183 bits (466), Expect = 2e-50
Identities = 95/399 (23%), Positives = 145/399 (36%), Gaps = 83/399 (20%)
Query: 6 VLCCDKTGTLTLNKLTV-----DKNLIEIFAGGVDA----------------------DT 38
V+C DKTGTLT N++TV D ++ +
Sbjct: 382 VICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRA 441
Query: 39 VVLMAARASQVENLDVI----DAAIVGM----LADPKEARADIQEVHFLPFDPTGKR--T 88
A V VI + A++ L + R +V +PF+ T K +
Sbjct: 442 AFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLS 501
Query: 89 ALTYIDSEGKMHRV-TKGSPEQILN-----LLHNKSK-----IGRKVNAVINKFAERGLR 137
T D H + KG+PE++L L+ + G R
Sbjct: 502 IHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGER 561
Query: 138 SLAVAYQEVPEGSKESSGSPWQ-----------FIGLIPLFDPPIHDSAETIRRALSLGL 186
L + E + F GL+ + DPP + + + + G+
Sbjct: 562 VLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGI 621
Query: 187 GVKMITGDQ----LAIAKETG-------RRLGMGTNMYPSSALSGQDRDESIV------- 228
V M+TGD AIA G + + + + V
Sbjct: 622 RVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLK 681
Query: 229 ALPVDELIEKADG-----FAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 283
+ EL+E FA P+ K IV+ Q I + G+GVND+PALKKADIG
Sbjct: 682 DMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIG 741
Query: 284 IAVADA-TDAARSAADIVLTEPGLNVIITAVLISRAIFQ 321
+A+ A +DAA++AAD++L + I+T V R IF
Sbjct: 742 VAMGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFD 780
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 181 bits (462), Expect = 5e-50
Identities = 90/403 (22%), Positives = 147/403 (36%), Gaps = 91/403 (22%)
Query: 6 VLCCDKTGTLTLNKLTVDKNLIEIFAGG--VDADTVVLMAARASQVENLDVIDAAIVGML 63
+C DKTGTLT N++TV ++ +ADT + A + + + L
Sbjct: 377 TICSDKTGTLTQNRMTVAH----MWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAAL 432
Query: 64 A-------------------------------------DPKEARADIQEVHFLPFDPTGK 86
+ R ++ +PF+ T K
Sbjct: 433 CNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNK 492
Query: 87 R--TALTYIDSEGKMHRV-TKGSPEQILN-----LLHNKSK-----IGRKVNAVINKFAE 133
+ S + + KG+PE+IL+ LL+ + + +
Sbjct: 493 YQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGG 552
Query: 134 RGLRSLAVAYQEVPEGSKESSGSPWQ-----------FIGLIPLFDPPIHDSAETIRRAL 182
G R L + +PE F+GL+ + DPP + + +
Sbjct: 553 LGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCR 612
Query: 183 SLGLGVKMITGDQ----LAIAKETG-------RRLGMGTNMYPSSALSGQDRDESIV--- 228
S G+ V M+TGD AIAK G + + ++ V
Sbjct: 613 SAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHG 672
Query: 229 ----ALPVDELIEKADG-----FAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKK 279
L + L + FA P+ K IV+ Q + I + G+GVND+PALKK
Sbjct: 673 SDLKDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKK 732
Query: 280 ADIGIAVADA-TDAARSAADIVLTEPGLNVIITAVLISRAIFQ 321
ADIG+A+ + +D ++ AAD++L + I+T V R IF
Sbjct: 733 ADIGVAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFD 775
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 165 bits (419), Expect = 2e-44
Identities = 82/279 (29%), Positives = 132/279 (47%), Gaps = 36/279 (12%)
Query: 79 LPFDPTGKRTALTYIDSEGKMHRV-----TKGSPEQILNLLHNKSKIG----------RK 123
L F K ++ ++ V KG+PE +++ + K
Sbjct: 486 LEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEK 545
Query: 124 VNAVINKF--AERGLRSLAVAYQEVPEGSKESSGSPWQ----------FIGLIPLFDPPI 171
+ +VI ++ LR LA+A ++ P +E F+G++ + DPP
Sbjct: 546 ILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPR 605
Query: 172 HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSS--ALSGQDRDESIVA 229
+ +I+ G+ V MITGD A RR+G+ + A +G++ D
Sbjct: 606 KEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFD----D 661
Query: 230 LPVDELIEKADG---FAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 286
LP+ E E FA V P HK +IV++LQ+ + I M G+GVNDAPALKKA+IGIA+
Sbjct: 662 LPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM 721
Query: 287 ADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRN 325
T A++A+++VL + + I+ AV RAI+ M+
Sbjct: 722 GSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQ 760
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 8e-30
Identities = 34/166 (20%), Positives = 70/166 (42%), Gaps = 30/166 (18%)
Query: 159 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL 218
+ I + D P + + + + + GL + +++GD+ KE + L
Sbjct: 126 EPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELN----------- 174
Query: 219 SGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALK 278
+ E + + PE K I++ L+ + MIG+GVNDA AL
Sbjct: 175 -------------IQEYY------SNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALA 215
Query: 279 KADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMR 324
AD+ +A+ + D +++ ADI+L + ++ + + + +
Sbjct: 216 LADVSVAMGNGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIP 261
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 1e-29
Identities = 82/328 (25%), Positives = 127/328 (38%), Gaps = 73/328 (22%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAA---RASQVENLDVIDA 57
+ + DKTGTLT + V +I D ++ +AA S+ I A
Sbjct: 10 AKDLQAVIFDKTGTLTEGRFGV----TDIVGFNHSEDELLQIAASLEARSE----HPIAA 61
Query: 58 AIVGMLADPKEARADIQEVHFLPFD-PTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN 116
AIV + ++ + EV F GK G R SP +
Sbjct: 62 AIV---EEAEKRGFGLTEVE--EFRAIPGKGVEGIV---NG--RRYMVVSP----GYI-- 105
Query: 117 KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAE 176
++G K + + K ++G + + + G+I L D +S E
Sbjct: 106 -RELGIKTDESVEKLKQQGKTVVFILKNG-------------EVSGVIALADRIRPESRE 151
Query: 177 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELI 236
I + ++G+ M+TGD +AK LG +D+
Sbjct: 152 AISKLKAIGIKCMMLTGDNRFVAKWVAEELG------------------------LDDYF 187
Query: 237 EKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSA 296
A V P K E VK +Q + ++ M+G+GVNDAPAL +AD+GIA+ TD A
Sbjct: 188 ------AEVLPHEKAEKVKEVQQK-YVTAMVGDGVNDAPALAQADVGIAIGAGTDVAVET 240
Query: 297 ADIVLTEPGLNVIITAVLISRAIFQRMR 324
ADIVL + V +SR + +
Sbjct: 241 ADIVLVRNDPRDVAAIVELSRKTYSKFH 268
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 1e-27
Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 31/166 (18%)
Query: 159 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL 218
+ G+I + D + ++ +G+ V MITGD A+ R L
Sbjct: 153 RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN----------- 201
Query: 219 SGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALK 278
+D +I A V P K E VK LQA+ + +G+G+NDAPAL
Sbjct: 202 -------------LDLVI------AEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALA 241
Query: 279 KADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMR 324
+AD+GIAV +D A + DIVL L ++ A+ +SR +++
Sbjct: 242 QADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 3e-27
Identities = 50/167 (29%), Positives = 72/167 (43%), Gaps = 33/167 (19%)
Query: 159 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL 218
+ + L+ + DP + ETI G+ + M+TGD A+ LG
Sbjct: 544 KTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLG----------- 592
Query: 219 SGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALK 278
+ +++ A + PE K IV L+ + I M G+GVNDAPAL
Sbjct: 593 -------------IKKVV------AEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALA 633
Query: 279 KADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRN 325
KADIGIA+ TD A +A + L L I A +S + M N
Sbjct: 634 KADIGIAMGTGTDVAIESAGVTLLHGDLRGIAKARRLSEST---MSN 677
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 112 bits (283), Expect = 8e-27
Identities = 75/330 (22%), Positives = 121/330 (36%), Gaps = 78/330 (23%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDV--IDAA 58
+ + DKTGTLT K V ++ D ++ +AA E I A
Sbjct: 401 AEKVTAVIFDKTGTLTKGKPEV----TDLVPLNGDERELLRLAA---IAERRSEHPIAEA 453
Query: 59 IVGMLADPKEARADIQEVHFLPFD-PTGKRTALTYIDSEG-KMHRVTKGSPEQILNLLHN 116
IV + + ++ + G+ G + G+ L+ +
Sbjct: 454 IVKKALEHGIELGEPEK-----VEVIAGE----------GVVADGILVGNK----RLMED 494
Query: 117 KS-KIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSA 175
+ +V + K ++ VA + G+I + D +
Sbjct: 495 FGVAVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAVSDTLKESAK 541
Query: 176 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDEL 235
++ +G+ V MITGD A+ R L +D +
Sbjct: 542 PAVQELKRMGIKVGMITGDNWRSAEAISRELN------------------------LDLV 577
Query: 236 IEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARS 295
I A V P K E VK LQA+ + +G+G+NDAPAL +AD+GIAV +D A
Sbjct: 578 I------AEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVE 630
Query: 296 AADIVLTEPGLNVIITAVLISRAIFQRMRN 325
+ DIVL L ++ A+ +SR M
Sbjct: 631 SGDIVLIRDDLRDVVAAIQLSRKT---MSK 657
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 3e-26
Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 31/166 (18%)
Query: 159 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL 218
+ G+I + D + ++ +G+ V MITGD A+ R L
Sbjct: 447 RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN----------- 495
Query: 219 SGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALK 278
+D +I A V P K E VK LQA+ + +G+G+NDAPAL
Sbjct: 496 -------------LDLVI------AEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALA 535
Query: 279 KADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMR 324
+AD+GIAV +D A + DIVL L ++ A+ +SR +++
Sbjct: 536 QADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 581
|
| >2o98_P H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, electrochemical proton G cell turgor, regulation, protein binding; HET: FSC; 2.70A {Nicotiana plumbaginifolia} Length = 52 | Back alignment and structure |
|---|
Score = 88.6 bits (219), Expect = 3e-22
Identities = 36/52 (69%), Positives = 47/52 (90%)
Query: 399 SSYGELSWMAEEARRRAEIARLRELHTLKGHVESLIRLKGLDIDAIQQSYSV 450
+++ EL+ +AEEA+RRAEIAR RELHTLKGHVES+++LKGLDI+ IQQSY +
Sbjct: 1 TNFNELNQLAEEAKRRAEIARQRELHTLKGHVESVVKLKGLDIETIQQSYDI 52
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 65.3 bits (160), Expect = 9e-13
Identities = 32/155 (20%), Positives = 65/155 (41%), Gaps = 17/155 (10%)
Query: 33 GVDADTVVLMAARAS--QVENLDVIDAAIV--GMLADPKEARADIQEVHFLPFDPTGKRT 88
G ++ V+ A S Q +++D A++ + + Q++ +PFD +R
Sbjct: 12 GKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRRM 71
Query: 89 ALTYIDSEGKMHRVTKGSPEQILNL---LHNKSKIG-------RKVNAVINKFAERGLRS 138
++ ++ V KG+ ++ILN+ + + +I RK+ V + +GLR
Sbjct: 72 SVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRV 131
Query: 139 LAVAYQEVPEGSKESSGSPWQ---FIGLIPLFDPP 170
+AVA + +P + + G I D
Sbjct: 132 VAVATKYLPAREGDYQRADESDLILEGYIAFLDHH 166
|
| >3m50_P N.plumbaginifolia H+-translocating ATPase mRNA; all helical, protein-protein complex, protein binding; HET: EBT; 2.60A {Nicotiana plumbaginifolia} PDB: 3m51_P* Length = 31 | Back alignment and structure |
|---|
Score = 57.6 bits (139), Expect = 2e-11
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 421 RELHTLKGHVESLIRLKGLDIDAIQQSYSV 450
RELHTLKGHVE++++LKGLDI+ IQQSY +
Sbjct: 2 RELHTLKGHVEAVVKLKGLDIETIQQSYDI 31
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} Length = 168 | Back alignment and structure |
|---|
Score = 49.4 bits (119), Expect = 3e-07
Identities = 14/62 (22%), Positives = 22/62 (35%), Gaps = 4/62 (6%)
Query: 248 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 303
K V + + +GN V+D LK+ + ADA A+ A +
Sbjct: 82 SDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADACSGAQKAVGYICKC 141
Query: 304 PG 305
G
Sbjct: 142 SG 143
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} Length = 176 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 7e-07
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 248 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 303
+ K +K I +GN VND P +AVA A D R AA V T
Sbjct: 85 DRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTTV 144
Query: 304 PG 305
PG
Sbjct: 145 PG 146
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* Length = 164 | Back alignment and structure |
|---|
Score = 47.5 bits (114), Expect = 1e-06
Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
Query: 248 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 303
K + L I IG+ +NDA LK+ I A A R + I L +
Sbjct: 78 VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLSTIFLEK 137
Query: 304 PG 305
G
Sbjct: 138 RG 139
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* Length = 188 | Back alignment and structure |
|---|
Score = 47.9 bits (115), Expect = 1e-06
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 248 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 303
+K L + I +G+ + D P ++K + +AVADA AD V
Sbjct: 100 SNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRI 159
Query: 304 PG 305
G
Sbjct: 160 AG 161
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} Length = 162 | Back alignment and structure |
|---|
Score = 47.5 bits (114), Expect = 1e-06
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Query: 248 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 303
K EI + ++ + + G IG+ V D +KK +AV +A + R A +
Sbjct: 83 YKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVAVYITQR 142
Query: 304 PG 305
G
Sbjct: 143 NG 144
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} Length = 191 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 2e-06
Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Query: 248 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 303
K +HL+ + IG+ + D P +++ +G+AV++A AD
Sbjct: 93 VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTER 152
Query: 304 PG 305
G
Sbjct: 153 TG 154
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* Length = 180 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 2e-06
Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
Query: 248 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 303
K L + + IG+ D PA AVADA ++A D VL+
Sbjct: 82 LEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLST 141
Query: 304 PG 305
G
Sbjct: 142 HG 143
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A Length = 189 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 3e-06
Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Query: 248 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 303
E K ++ L A + +G+ + D P +++ +G+AVA+A R A +
Sbjct: 93 EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAASFVREHAHGITRA 152
Query: 304 PG 305
G
Sbjct: 153 QG 154
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} Length = 211 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 3e-06
Identities = 15/62 (24%), Positives = 21/62 (33%), Gaps = 4/62 (6%)
Query: 248 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 303
K L A IG+ + D P + + + +AVADA A V
Sbjct: 123 SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKAHYVTRI 182
Query: 304 PG 305
G
Sbjct: 183 KG 184
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} Length = 195 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 4e-06
Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 248 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 303
+ K + + + I G IG+ + D P ++K + + VAD A+ V
Sbjct: 99 DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLLAQRANYVTHI 158
Query: 304 PG 305
G
Sbjct: 159 KG 160
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 45.6 bits (107), Expect = 3e-05
Identities = 46/309 (14%), Positives = 83/309 (26%), Gaps = 97/309 (31%)
Query: 213 YP--SSALSGQDRDESIVALPVDELIEKADGFAG---VFPEHKYEIV---KHLQARNH-- 262
Y S + + R S + IE+ D VF KY + +L+ R
Sbjct: 91 YKFLMSPIKTEQRQPS---MMTRMYIEQRDRLYNDNQVFA--KYNVSRLQPYLKLRQALL 145
Query: 263 ---------ICGMIGNG--------VNDAPALKKADIGI---AVADATDAARSAADIVLT 302
I G++G+G K D I + + S ++
Sbjct: 146 ELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKN----CNSPETVLEM 201
Query: 303 EPGLNVIITAVLISRA------------IFQRMRNYMVRG--------IDGLSSTEFIQV 342
L I SR+ I +R + + + + +
Sbjct: 202 LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNA 261
Query: 343 LELN--FLFTLDTVIAILQTAFTSKKDF--GKEERELLWAHAQRTLHGLQPPDT-SMFS- 396
L+ L T T F DF + H L P + S+
Sbjct: 262 FNLSCKILLT---------TRFKQVTDFLSAATTTHISLDHHSM---TLTPDEVKSLLLK 309
Query: 397 -VRSSYGELSWMAEEARRR-----AEI-ARLRE--------LHTLKGHVESLIR--LKGL 439
+ +L E + I +R+ H + ++I L L
Sbjct: 310 YLDCRPQDLP---REVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVL 366
Query: 440 DIDAIQQSY 448
+ ++ +
Sbjct: 367 EPAEYRKMF 375
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 4e-05
Identities = 24/132 (18%), Positives = 38/132 (28%), Gaps = 7/132 (5%)
Query: 155 GSPWQFIGLIPLFDPPIHDSA-ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY 213
S + I L D I + E + + +I+G + +Y
Sbjct: 62 SSLKEEITSFVLEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIY 121
Query: 214 PSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVND 273
+ A D G K ++ L N MIG+ V D
Sbjct: 122 CNHASFDNDYIHIDWPHSCKGTCSNQCGCC------KPSVIHELSEPNQYIIMIGDSVTD 175
Query: 274 APALKKADIGIA 285
A K +D+ A
Sbjct: 176 VEAAKLSDLCFA 187
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 2e-04
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 245 VFPEHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 300
+F K E++ LQ +I ++G+G ND K A I IA +A + + A
Sbjct: 138 MFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHC 196
Query: 301 LTEPGLNVII 310
+ EP L +I
Sbjct: 197 INEPDLALIK 206
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 2e-04
Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 245 VFPEHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 300
V + K +I+ L + + +G+G ND + A +G+A A + A
Sbjct: 241 VSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTA 299
Query: 301 LTEPGLNVII 310
+ GL ++
Sbjct: 300 VRFAGLGGVV 309
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 2e-04
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Query: 245 VFPEHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 300
+ K EI++ + I +G+G ND KKA + IA A + ADI
Sbjct: 139 LKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADIC 197
Query: 301 LTEPGLNVII 310
+ + L I+
Sbjct: 198 IEKRDLREIL 207
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A Length = 227 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 2e-04
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 267 IGNGVNDAPALKKADIGIAVADATDAARSAADIV 300
IG+ ND P + A+ATD ++ +D V
Sbjct: 175 IGDSNNDMPMFQLPVRKACPANATDNIKAVSDFV 208
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 3e-04
Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 245 VFPEHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 300
+ +K + + L AR +I G+G ND P L+ A GIA A R
Sbjct: 242 MNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQ 300
Query: 301 LTEPGLNVII 310
+ G +++
Sbjct: 301 INYHGFELLL 310
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 Length = 231 | Back alignment and structure |
|---|
Score = 39.8 bits (94), Expect = 9e-04
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 267 IGNGVNDAPALKKADIGIAVADATDAARSAADIV 300
+G+G ND A K +AVA A + AD V
Sbjct: 175 VGDGENDLDAFKVVGYKVAVAQAPKILKENADYV 208
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 450 | |||
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.96 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.96 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.95 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.83 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.76 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.51 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.42 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 99.41 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.39 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.36 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.34 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.33 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.3 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.28 | |
| 2o98_P | 52 | H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, | 99.27 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.26 | |
| 3m50_P | 31 | N.plumbaginifolia H+-translocating ATPase mRNA; al | 99.24 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.14 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.14 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.13 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.1 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.1 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.05 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.03 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.02 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 99.01 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.0 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.0 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.0 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.98 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.97 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.91 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.91 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.91 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.88 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 98.87 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.8 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.76 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.72 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.71 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.71 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.65 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.65 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.65 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.57 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.56 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.56 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.54 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.52 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.52 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.5 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.5 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.49 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.45 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.41 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 98.38 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.38 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.37 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.36 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.36 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.33 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.33 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.32 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.32 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.31 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.3 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.29 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.28 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.28 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.27 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 98.27 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.26 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 98.26 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 98.26 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.25 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 98.24 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 98.24 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.24 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.23 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.22 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 98.19 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.18 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.18 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 98.17 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 98.16 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 98.15 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 98.14 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 98.08 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.08 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 98.05 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 98.04 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 98.02 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 98.01 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 98.01 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 98.01 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 98.01 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 98.01 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 98.01 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.99 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.99 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.98 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.94 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.94 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.89 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.86 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.85 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.65 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.6 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 97.6 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.51 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 97.46 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 97.42 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 97.36 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 97.33 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 97.33 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 97.31 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 97.24 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 97.2 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 97.2 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 97.16 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 97.14 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 97.13 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 96.97 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 96.92 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 96.84 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 96.7 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 96.54 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 96.51 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 96.5 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 96.46 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 96.46 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 96.34 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 96.28 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 96.11 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 96.07 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 95.71 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 95.54 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 94.86 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 94.63 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 94.49 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 93.96 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 93.75 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 93.2 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 91.78 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 90.77 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 90.76 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 90.63 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 90.14 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 89.5 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 87.25 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 86.93 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 85.97 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 81.39 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 80.15 |
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-66 Score=575.93 Aligned_cols=357 Identities=70% Similarity=1.074 Sum_probs=313.3
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcccEEEEec
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLP 80 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~l~~~p 80 (450)
||++|+||||||||||+|+|+|.+++++.+..+.++++++.+++.++...+.||++.|++.++.++.+.+.+++.++.+|
T Consensus 320 Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ll~~aa~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~p 399 (885)
T 3b8c_A 320 MAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLP 399 (885)
T ss_dssp HTTCCCCEEECCCCCSCCCCCCCSCCCCSSCSSTTHHHHHHHHHHHCCSSSCCSHHHHHHHTTCCTTCCCCSSCCBCCCC
T ss_pred HhCCCEEEECCCCCcccCceEEEEEEEeccCCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHhhchhhHhhcCceeeccc
Confidence 58999999999999999999998654444445678889999999998765667999999998876655566788899999
Q ss_pred cCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcCChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCCcEE
Q 013069 81 FDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQF 160 (450)
Q Consensus 81 F~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~~~ 160 (450)
|++.+|+|++++++.+|+.+.++||+|+.++++|..+.+.++.+.+.+++|+++|+|++++|++++++.+.+..|++++|
T Consensus 400 F~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~~~~~e~~l~~ 479 (885)
T 3b8c_A 400 FNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEF 479 (885)
T ss_dssp CCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCCSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSSSSSCCCCCCCC
T ss_pred CCcccceEEEEEEecCCcEEEEEeCCHHHHHHhccCchhhHHHHHHHHHHHHhCCCeEEEEEEeccccccccccccCcEE
Confidence 99999999998887778888999999999999998666667778889999999999999999999988777788899999
Q ss_pred EEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcc
Q 013069 161 IGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240 (450)
Q Consensus 161 lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (450)
+|+++++||||++++++|++|+++|++|+|+|||+..+|.++|+++||..+..+...+.|.+.+..+...++++++++.+
T Consensus 480 lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~ 559 (885)
T 3b8c_A 480 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKAD 559 (885)
T ss_dssp CEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSC
T ss_pred EEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCc
Confidence 99999999999999999999999999999999999999999999999987666666777777666567778889999999
Q ss_pred ceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHHHHHH
Q 013069 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIF 320 (450)
Q Consensus 241 v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~~~ 320 (450)
+|++++|+||.++|+.||++|+.|+|+|||+||+|||++|||||||+++++.++++||+|+++++|++|+.+|.+||++|
T Consensus 560 v~arv~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~ 639 (885)
T 3b8c_A 560 GFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIF 639 (885)
T ss_dssp CEECCCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCSSSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHH
T ss_pred EEEEECHHHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEeCCccHHHHHhcceeeccCchhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HhhhcccccHHHHHHH
Q 013069 321 QRMRNYMVRGIDGLSSTEFIQ-VLELNFLFTLDTVIAI 357 (450)
Q Consensus 321 ~~i~~~~~~~~~~~~~~i~l~-~~~~~~~~pl~~~~~l 357 (450)
+||++|+.|.+..++..++.. ...+.+.+|+.+++++
T Consensus 640 ~ni~~~i~~~l~~n~~~~~~~~~~~~~~~~~l~p~~il 677 (885)
T 3b8c_A 640 QRMKNYTIYAVSITIRIVFGFMLIALIWEFDFSAFMVL 677 (885)
T ss_dssp HHHHHHHHHHHHHTTTTTSTTHHHHSSCSSCSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCcCcCHHHHH
Confidence 999999999987644322211 1122334567777765
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-61 Score=533.64 Aligned_cols=349 Identities=40% Similarity=0.654 Sum_probs=285.9
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCC--ChHHHHHHHhhcCc---hhhhhcccE
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENL--DVIDAAIVGMLADP---KEARADIQE 75 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~--~pi~~ai~~~~~~~---~~~~~~~~~ 75 (450)
||++|+||||||||||+|+|+|.+++. ..+.++++++..++.+....+. ||++.|++.++... ......++.
T Consensus 369 Lg~v~vIc~DKTGTLT~n~m~v~~~~~---~~g~~~~~ll~~a~l~~~~~~~~~~P~e~Al~~~~~~~~~~~~~~~~~~~ 445 (920)
T 1mhs_A 369 LAGVEILCSDKTGTLTKNKLSLHDPYT---VAGVDPEDLMLTACLAASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKV 445 (920)
T ss_dssp HHTCCEEEEETBTTTBSSCSCCCCCBC---CSCCCCTHHHHHHHHSCCCSSCSCCSHHHHHHHHHHHSSSCCGGGSCCCE
T ss_pred hccCcEEEECCCCCccccceeEEEEee---cCCCCHHHHHHHHHHhcCCcccCCChHHHHHHHHHHhcccchhhccccce
Confidence 589999999999999999999998653 2355666776666655443333 79999999875321 123456889
Q ss_pred EEEeccCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcC----ChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCc
Q 013069 76 VHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN----KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK 151 (450)
Q Consensus 76 l~~~pF~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~----~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~ 151 (450)
++++||++.+|+|++++...+|+.+.++||+|+.|+++|.. +++.++.+.+.+++|+++|+|++++||+.
T Consensus 446 ~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~------ 519 (920)
T 1mhs_A 446 LQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKR------ 519 (920)
T ss_dssp EEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCS------
T ss_pred eEEeeccCCCCeEEEEEEeCCCcEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEec------
Confidence 99999999999999998777788889999999999999974 33455678888999999999999999984
Q ss_pred CCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC--CccccCCchhhhhhc
Q 013069 152 ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP--SSALSGQDRDESIVA 229 (450)
Q Consensus 152 ~~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~--~~~l~~~~~~~~~~~ 229 (450)
.|++|+|+|+++++||||++++++|++|+++||+|+|+|||+..+|.++|+++||..+.++ ..++.|. ..+..
T Consensus 520 --~e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~---~~~~~ 594 (920)
T 1mhs_A 520 --GEGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGG---GDMPG 594 (920)
T ss_dssp --SSCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBC---CCGGG
T ss_pred --cccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCc---ccCCH
Confidence 2568999999999999999999999999999999999999999999999999999754322 1233333 22334
Q ss_pred CChhHHhhhccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHH
Q 013069 230 LPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVI 309 (450)
Q Consensus 230 ~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i 309 (450)
.++.+.+++..+|++++|+||.++|+.||+.|+.|+|+|||+||+|||++|||||||+++++.++++||+|+++++|++|
T Consensus 595 ~el~~~~~~~~V~arv~P~~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADiVl~~~~~~~I 674 (920)
T 1mhs_A 595 SEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVEGSSDAARSAADIVFLAPGLGAI 674 (920)
T ss_dssp GGGGTTTTTTSCEESCCSTHHHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEETTSCHHHHHSSSEEESSCCSHHH
T ss_pred HHHHHHHhhCeEEEEeCHHHHHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCcccccccHHHHHhcCeEEcCCCHHHH
Confidence 45666778889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhhhcccccHHHHHHHHHhccC
Q 013069 310 ITAVLISRAIFQRMRNYMVRGIDGLSST-EFIQVLELNFLFTLDTVIAILQTAFT 363 (450)
Q Consensus 310 ~~~I~~~R~~~~~i~~~~~~~~~~~~~~-i~l~~~~~~~~~pl~~~~~l~~~~~~ 363 (450)
+.++.+||++|+||++++.|.+...... +++.+...+..+|++++++++...++
T Consensus 675 ~~ai~~gR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~l~~~~il~~~l~~ 729 (920)
T 1mhs_A 675 IDALKTSRQIFHRMYAYVVYRIALSIHLEIFLGLWIAILNRSLNIELVVFIAIFA 729 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 9999999999999999999998754433 33333333344566666665443333
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-58 Score=520.65 Aligned_cols=362 Identities=25% Similarity=0.378 Sum_probs=287.4
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecc--c-CC-----------CCh--HHHHHHHHHhccc------C--------
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIF--A-GG-----------VDA--DTVVLMAARASQV------E-------- 50 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~--~-~~-----------~~~--~~il~~aa~~~~~------~-------- 50 (450)
||++|+||||||||||+|+|+|.++++... . .+ .+. ..++..++.|... +
T Consensus 372 Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~ 451 (1028)
T 2zxe_A 372 LGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQAGQDNVPILKRS 451 (1028)
T ss_dssp HHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHHHHHHHHHHSCCCEECTTCTTSCGGGSC
T ss_pred hcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCHHHHHHHHHHHhcCCCeeecCCCCCccccce
Confidence 589999999999999999999999875311 0 00 011 2566666665321 1
Q ss_pred -CCChHHHHHHHhhcC----chhhhhcccEEEEeccCCCCceEEEEEEcc---CCeEEEEEcCCHHHHHhhhcC------
Q 013069 51 -NLDVIDAAIVGMLAD----PKEARADIQEVHFLPFDPTGKRTALTYIDS---EGKMHRVTKGSPEQILNLLHN------ 116 (450)
Q Consensus 51 -~~~pi~~ai~~~~~~----~~~~~~~~~~l~~~pF~~~~kr~svi~~~~---~g~~~~~~KGa~~~i~~~~~~------ 116 (450)
..||.|.|++.++.. ....+..++.++.+||+|.+|||+++++.. +|++++++||||+.|+++|..
T Consensus 452 ~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g~ 531 (1028)
T 2zxe_A 452 VAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGA 531 (1028)
T ss_dssp EESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEECBTTB
T ss_pred eCCCchHHHHHHHHHHhCCCHHHHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCCcHHHHHHhhhhhcCCC
Confidence 237889999987643 223456789999999999999999999863 577899999999999999963
Q ss_pred ----ChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCc-----------CCCCCCcEEEEeccCCCCCCcchHHHHHHH
Q 013069 117 ----KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK-----------ESSGSPWQFIGLIPLFDPPIHDSAETIRRA 181 (450)
Q Consensus 117 ----~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~-----------~~~e~~~~~lG~i~l~D~lr~~~~~~I~~l 181 (450)
+++.++.+.+.+++|+++|+|+|++||+.++++++ +..|.+++|+|+++++||+|++++++|++|
T Consensus 532 ~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l 611 (1028)
T 2zxe_A 532 EEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKC 611 (1028)
T ss_dssp CCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTTCSCCSSEEEEEEEEEECCBCTTHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccchhhhhhhhcCeEEEeeeccCCCCChhHHHHHHHH
Confidence 23456778889999999999999999998865421 234689999999999999999999999999
Q ss_pred HhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC----------------------CccccCCchhhhhhcCChhHHhhhc
Q 013069 182 LSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP----------------------SSALSGQDRDESIVALPVDELIEKA 239 (450)
Q Consensus 182 ~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~----------------------~~~l~~~~~~~~~~~~~~~~~~~~~ 239 (450)
+++|++|+|+|||+..+|.++|+++||..+... ..++.|.+.+. +....+++++..+
T Consensus 612 ~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~-~~~~~l~~~~~~~ 690 (1028)
T 2zxe_A 612 RSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKD-LSTEVLDDILHYH 690 (1028)
T ss_dssp HHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTT-CCHHHHHHHHHHC
T ss_pred HHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhh-CCHHHHHHHHhhC
Confidence 999999999999999999999999999743211 01122211110 1111234455555
Q ss_pred c--ceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEec-cchHHHhhccCEEecCCCchHHHHHHHHH
Q 013069 240 D--GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLIS 316 (450)
Q Consensus 240 ~--v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~I~~~ 316 (450)
. +|++++|+||..+|+.+|+.|+.|+|+|||.||+|||+.|||||||+ +|++.++++||+|+.++++++|+.+|.+|
T Consensus 691 ~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~~~~~~~I~~~i~~g 770 (1028)
T 2zxe_A 691 TEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDDNFASIVTGVEEG 770 (1028)
T ss_dssp SEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEEETTCCTHHHHHHHHHH
T ss_pred CcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEEecCCCHHHHHHHHHHH
Confidence 4 89999999999999999999999999999999999999999999999 79999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--ccccHHHHHHHHHhccC
Q 013069 317 RAIFQRMRNYMVRGIDGLSSTEFIQVLELN--FLFTLDTVIAILQTAFT 363 (450)
Q Consensus 317 R~~~~~i~~~~~~~~~~~~~~i~l~~~~~~--~~~pl~~~~~l~~~~~~ 363 (450)
|++|+||++++.|++..++..++..+...+ ..+|++++++++...++
T Consensus 771 R~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~qil~inl~~ 819 (1028)
T 2zxe_A 771 RLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCIDLGT 819 (1028)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCCCCSSCHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHH
Confidence 999999999999999876666554443322 45788888888544443
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-57 Score=512.10 Aligned_cols=356 Identities=24% Similarity=0.336 Sum_probs=283.8
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCC----------------ChHHHHHHHHHhccc---------------
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGV----------------DADTVVLMAARASQV--------------- 49 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~----------------~~~~il~~aa~~~~~--------------- 49 (450)
||++++||||||||||+|+|+|.++++....... ....++..++.|...
T Consensus 377 LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~a~~~~~~~~~~~~~~~ 456 (1034)
T 3ixz_A 377 LGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRI 456 (1034)
T ss_pred hcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCHHHHHHHHHHHHhccceeccCcCCCcccCce
Confidence 6899999999999999999999998753211100 012455555555321
Q ss_pred CCCChHHHHHHHhhcC----chhhhhcccEEEEeccCCCCceEEEEEEcc---CCeEEEEEcCCHHHHHhhhcC------
Q 013069 50 ENLDVIDAAIVGMLAD----PKEARADIQEVHFLPFDPTGKRTALTYIDS---EGKMHRVTKGSPEQILNLLHN------ 116 (450)
Q Consensus 50 ~~~~pi~~ai~~~~~~----~~~~~~~~~~l~~~pF~~~~kr~svi~~~~---~g~~~~~~KGa~~~i~~~~~~------ 116 (450)
...+|.+.|++.++.. ....+..++.++.+||+|.+|+|++++... ++++++++||||+.|+++|..
T Consensus 457 ~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~ 536 (1034)
T 3ixz_A 457 VIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQ 536 (1034)
T ss_pred eccCchHHHHHHHHHHhCCChHHHHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEeCChHHHHHHhHHhhcCCc
Confidence 1236899999887642 334467789999999999999998877643 367899999999999999962
Q ss_pred ----ChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCc-----------CCCCCCcEEEEeccCCCCCCcchHHHHHHH
Q 013069 117 ----KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK-----------ESSGSPWQFIGLIPLFDPPIHDSAETIRRA 181 (450)
Q Consensus 117 ----~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~-----------~~~e~~~~~lG~i~l~D~lr~~~~~~I~~l 181 (450)
+++.++.+.+.+++|+.+|+|+|++||+.++++++ +..|++++|+|+++++||+|++++++|++|
T Consensus 537 ~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l 616 (1034)
T 3ixz_A 537 ELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKC 616 (1034)
T ss_pred eecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccchhhhhccccCcEEEEEEeccCCCchhHHHHHHHH
Confidence 34556778899999999999999999998875432 234789999999999999999999999999
Q ss_pred HhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC----------------------CccccCCchhhhhhcCChhHHhhhc
Q 013069 182 LSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP----------------------SSALSGQDRDESIVALPVDELIEKA 239 (450)
Q Consensus 182 ~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~----------------------~~~l~~~~~~~~~~~~~~~~~~~~~ 239 (450)
+++|++|+|+|||+..+|.++|+++||..+... ..++.|.+.. .+...++.+.+...
T Consensus 617 ~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~-~~~~~~l~~~~~~~ 695 (1034)
T 3ixz_A 617 RTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLK-DMDPSELVEALRTH 695 (1034)
T ss_pred HHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhh-hCCHHHHHHHHHhC
Confidence 999999999999999999999999999643210 0122222111 11111233444444
Q ss_pred --cceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEec-cchHHHhhccCEEecCCCchHHHHHHHHH
Q 013069 240 --DGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLIS 316 (450)
Q Consensus 240 --~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~I~~~ 316 (450)
.+|++++|+||.++|+.+|+.|+.|+|+|||.||+|||+.||+||||| +|++.++++||+|+.++++++|+.+|++|
T Consensus 696 ~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~~~gI~~ai~~G 775 (1034)
T 3ixz_A 696 PEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGVEQG 775 (1034)
T ss_pred CceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCEEeccCCchHHHHHHHHH
Confidence 389999999999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhh--cccccHHHHHHH
Q 013069 317 RAIFQRMRNYMVRGIDGLSSTEFIQVLEL--NFLFTLDTVIAI 357 (450)
Q Consensus 317 R~~~~~i~~~~~~~~~~~~~~i~l~~~~~--~~~~pl~~~~~l 357 (450)
|++|+||++++.|.+..++..+...+... ...+|+.++++|
T Consensus 776 R~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL 818 (1034)
T 3ixz_A 776 RLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITIL 818 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHH
Confidence 99999999999999987776655443332 256789999987
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-57 Score=510.40 Aligned_cols=356 Identities=27% Similarity=0.385 Sum_probs=281.4
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecc--------------cCCCCh-------------------HHHHHHHHHhc
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIF--------------AGGVDA-------------------DTVVLMAARAS 47 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~--------------~~~~~~-------------------~~il~~aa~~~ 47 (450)
||++|+||||||||||+|+|+|.++++... ..+..+ ..++..++.|.
T Consensus 343 Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~alc~ 422 (995)
T 3ar4_A 343 LGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCN 422 (995)
T ss_dssp HHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCEEETTEECCGGGCHHHHHHHHHHHHSC
T ss_pred hcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccCCCcCCccccccccccccccccHHHHHHHHHHHHcC
Confidence 589999999999999999999999865210 000000 12333444443
Q ss_pred ccC------------CCChHHHHHHHhhcCc-------h-------------hhhhcccEEEEeccCCCCceEEEEEEcc
Q 013069 48 QVE------------NLDVIDAAIVGMLADP-------K-------------EARADIQEVHFLPFDPTGKRTALTYIDS 95 (450)
Q Consensus 48 ~~~------------~~~pi~~ai~~~~~~~-------~-------------~~~~~~~~l~~~pF~~~~kr~svi~~~~ 95 (450)
... ..+|.|.|++.++... . ..+..|+.++.+||+|.+|||+++++..
T Consensus 423 ~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~ 502 (995)
T 3ar4_A 423 DSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPA 502 (995)
T ss_dssp CCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEES
T ss_pred CCcccccCCCCceeecCCccHHHHHHHHHHcCCccccccccccccccccchhhhhhhCceEEEeecCCCCCeeEEEEecC
Confidence 211 1479999998665321 0 1245688999999999999999999876
Q ss_pred CC-----eEEEEEcCCHHHHHhhhcC----------ChhhHHHHHHHHHHH--HHhcchhhhhhceecCCCC--------
Q 013069 96 EG-----KMHRVTKGSPEQILNLLHN----------KSKIGRKVNAVINKF--AERGLRSLAVAYQEVPEGS-------- 150 (450)
Q Consensus 96 ~g-----~~~~~~KGa~~~i~~~~~~----------~~~~~~~~~~~~~~~--a~~Glr~l~vA~~~~~~~~-------- 150 (450)
+| +..+|+||+|+.|+++|.. +++.++.+.+.+++| +++|+|+|++||++++..+
T Consensus 503 ~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~~~~~~~~ 582 (995)
T 3ar4_A 503 KSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDS 582 (995)
T ss_dssp SCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHSTTCCEEEEEEEESSCCCGGGCCTTCG
T ss_pred CCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHHHHHhhhccceEEEEEEEecCccccccccccc
Confidence 66 5789999999999999963 234566788889999 9999999999999886432
Q ss_pred --cCCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--CCccccCCchhhh
Q 013069 151 --KESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSALSGQDRDES 226 (450)
Q Consensus 151 --~~~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~--~~~~l~~~~~~~~ 226 (450)
++..|++++|+|+++++||+|++++++|+.|+++|++++|+|||+..+|.++|+++||..... ...++.|.+.+.
T Consensus 583 ~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~- 661 (995)
T 3ar4_A 583 SRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDD- 661 (995)
T ss_dssp GGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHT-
T ss_pred hhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCcccceEEEchhhhh-
Confidence 123478999999999999999999999999999999999999999999999999999975321 123344432221
Q ss_pred hhcCChhHHhhhccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCc
Q 013069 227 IVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGL 306 (450)
Q Consensus 227 ~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l 306 (450)
+...+..+++++..+|++++|+||.++|+.+|+.|+.|+|+|||.||+|||+.||+||||+++++.++++||+|+.++++
T Consensus 662 l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiamg~g~~~ak~aAd~vl~~~~~ 741 (995)
T 3ar4_A 662 LPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNF 741 (995)
T ss_dssp SCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEETTSCHHHHHTCSEEETTCCH
T ss_pred CCHHHHHHHHhhCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEEeCCCCHHHHHhCCEEECCCCH
Confidence 11123456677788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhc-ccccHHHHHHH
Q 013069 307 NVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQV-LELN-FLFTLDTVIAI 357 (450)
Q Consensus 307 ~~i~~~I~~~R~~~~~i~~~~~~~~~~~~~~i~l~~-~~~~-~~~pl~~~~~l 357 (450)
.+|+.+|.+||++|+||++++.|.+..++..++..+ ..++ +..|+.+++++
T Consensus 742 ~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~~~pl~~~qil 794 (995)
T 3ar4_A 742 STIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLL 794 (995)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHH
Confidence 999999999999999999999999987655443322 2222 44677787776
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-50 Score=441.05 Aligned_cols=316 Identities=25% Similarity=0.284 Sum_probs=272.5
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcccEEEEec
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLP 80 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~l~~~p 80 (450)
||++|+||||||||||+|+|+|.++. ..+.+.++++.+++..+..++| |++.|++.++.+. ++......+
T Consensus 417 l~~v~~i~fDKTGTLT~g~~~v~~i~----~~~~~~~~~l~~aa~le~~s~h-Pla~Aiv~~a~~~-----~~~~~~~~~ 486 (736)
T 3rfu_A 417 MEKVNTLVVDKTGTLTEGHPKLTRIV----TDDFVEDNALALAAALEHQSEH-PLANAIVHAAKEK-----GLSLGSVEA 486 (736)
T ss_dssp HTSCCEEEECCBTTTBCSSCEEEEEE----ESSSCHHHHHHHHHHHHHSSCC-HHHHHHHHHHHTT-----CCCCCCCSC
T ss_pred hcCCCEEEEeCCCCCcCCceEEEEEE----ecCCCHHHHHHHHHHHhhcCCC-hHHHHHHHHHHhc-----CCCccCccc
Confidence 58999999999999999999999975 3467889999999998888765 9999999887532 222333457
Q ss_pred cCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcCChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCCcEE
Q 013069 81 FDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQF 160 (450)
Q Consensus 81 F~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~~~ 160 (450)
|++..++..... .+|+ .+.+|+++.+.+..... ..+.+..++++.+|+|++++|++. ++
T Consensus 487 f~~~~g~gv~~~--~~g~--~~~~G~~~~~~~~~~~~----~~~~~~~~~~~~~G~~vl~va~d~-------------~~ 545 (736)
T 3rfu_A 487 FEAPTGKGVVGQ--VDGH--HVAIGNARLMQEHGGDN----APLFEKADELRGKGASVMFMAVDG-------------KT 545 (736)
T ss_dssp CCCCTTTEEEEC--SSSS--CEEEESHHHHHHHCCCC----HHHHHHHHHHHHTTCEEEEEEETT-------------EE
T ss_pred ccccCCceEEEE--ECCE--EEEEcCHHHHHHcCCCh----hHHHHHHHHHHhcCCeEEEEEECC-------------EE
Confidence 777776643322 3453 46679999887754332 245567889999999999999976 99
Q ss_pred EEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcc
Q 013069 161 IGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240 (450)
Q Consensus 161 lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (450)
+|+++++|++|++++++|++|+++|++++|+|||+..+|..+++++||. +
T Consensus 546 ~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~------------------------------~ 595 (736)
T 3rfu_A 546 VALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIK------------------------------K 595 (736)
T ss_dssp EEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCC------------------------------C
T ss_pred EEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC------------------------------E
Confidence 9999999999999999999999999999999999999999999999996 4
Q ss_pred ceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHHHHHH
Q 013069 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIF 320 (450)
Q Consensus 241 v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~~~ 320 (450)
+|++++|++|.++|+.+|+.|+.|+|+|||.||+|||+.||+||||+++++.++++||+|+.++++++|+.++++||+++
T Consensus 596 v~a~~~P~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAmg~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~ 675 (736)
T 3rfu_A 596 VVAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMGTGTDVAIESAGVTLLHGDLRGIAKARRLSESTM 675 (736)
T ss_dssp EECSCCHHHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEESSSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHH
T ss_pred EEEecCHHHHHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEEeCCccHHHHHhCCEEEccCCHHHHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccc--cHHHHHHHHHhccCcccccchhHHHHHH
Q 013069 321 QRMRNYMVRGIDGLSSTEFIQVLELNFLF--TLDTVIAILQTAFTSKKDFGKEERELLW 377 (450)
Q Consensus 321 ~~i~~~~~~~~~~~~~~i~l~~~~~~~~~--pl~~~~~l~~~~~~~~~~~~~~~~~~~~ 377 (450)
+||++|+.|++.++..++.+.++.+++++ .++++.--+.|.+++..+..++.|...|
T Consensus 676 ~~i~qnl~~a~~yN~~~iplAag~l~p~~G~~l~P~~aa~~m~~Ssv~Vv~nslrl~~~ 734 (736)
T 3rfu_A 676 SNIRQNLFFAFIYNVLGVPLAAGVLYPLTGLLLSPMIAAAAMALSSVSVIINALRLKRV 734 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSSTTTSSCCCCHHHHHHHHHHHHHHHHHHHHTCCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHhhHHHHHHHHHHhccc
Confidence 99999999999999999999888776543 3456666688889999998888877654
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-48 Score=426.77 Aligned_cols=312 Identities=24% Similarity=0.287 Sum_probs=258.1
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcccEEEEec
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLP 80 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~l~~~p 80 (450)
||++|+||||||||||+|+|+|.++.. .+.+.++++.+++.++..++| |++.|++.++.+.+............|
T Consensus 401 lg~v~~i~fDKTGTLT~g~~~v~~~~~----~~~~~~~~l~~aa~~e~~s~h-P~~~Ai~~~a~~~~~~~~~~~~~~~~~ 475 (723)
T 3j09_A 401 AEKVTAVIFDKTGTLTKGKPEVTDLVP----LNGDERELLRLAAIAERRSEH-PIAEAIVKKALEHGIELGEPEKVEVIA 475 (723)
T ss_dssp GGGCCEEEEEHHHHTSCSCCEEEEEEE----SSSCHHHHHHHHHHHHTTCCS-HHHHHHHHHHHHTTCCCCSCCCCEEET
T ss_pred hhcCCEEEEcCCCccccCceEEEEEEe----CCCCHHHHHHHHHHHhccCCC-chhHHHHHHHHhcCCCcCCccceEEec
Confidence 689999999999999999999999763 256889999999999888765 999999987653221111111111121
Q ss_pred cCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcCChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCCcEE
Q 013069 81 FDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQF 160 (450)
Q Consensus 81 F~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~~~ 160 (450)
. +. +. ...+.+|+++.+.+.. .+.++.+....++++.+|+|++++|++. ++
T Consensus 476 g-----~g-~~-------~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~va~~~-------------~~ 526 (723)
T 3j09_A 476 G-----EG-VV-------ADGILVGNKRLMEDFG---VAVSNEVELALEKLEREAKTAVIVARNG-------------RV 526 (723)
T ss_dssp T-----TE-EE-------ETTEEEECHHHHHHTT---CCCCHHHHHHHHHHHTTTCEEEEEEETT-------------EE
T ss_pred C-----Cc-eE-------EEEEEECCHHHHHhcC---CCccHHHHHHHHHHHhcCCeEEEEEECC-------------EE
Confidence 1 10 00 0236689998876633 2334567788899999999999999865 99
Q ss_pred EEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcc
Q 013069 161 IGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240 (450)
Q Consensus 161 lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (450)
+|+++++|++|++++++|++|+++|++++|+|||+..+|..+++++|+. .
T Consensus 527 ~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~------------------------------~ 576 (723)
T 3j09_A 527 EGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------L 576 (723)
T ss_dssp EEEEEEECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------E
T ss_pred EEEEeecCCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCc------------------------------E
Confidence 9999999999999999999999999999999999999999999999996 4
Q ss_pred ceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHHHHHH
Q 013069 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIF 320 (450)
Q Consensus 241 v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~~~ 320 (450)
+|++++|++|.++|+.+++. +.|+|+|||.||+|||+.||+||||+++++.++++||+|+.++++++++.++.+||+++
T Consensus 577 ~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~ 655 (723)
T 3j09_A 577 VIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTM 655 (723)
T ss_dssp EECSCCTTCHHHHHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEECCCCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHH
T ss_pred EEccCCHHHHHHHHHHHhcC-CeEEEEECChhhHHHHhhCCEEEEeCCCcHHHHHhCCEEEeCCCHHHHHHHHHHHHHHH
Confidence 79999999999999999988 89999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccc--ccHHHHHHHHHhccCcccccchhHHHHHH
Q 013069 321 QRMRNYMVRGIDGLSSTEFIQVLELNFL--FTLDTVIAILQTAFTSKKDFGKEERELLW 377 (450)
Q Consensus 321 ~~i~~~~~~~~~~~~~~i~l~~~~~~~~--~pl~~~~~l~~~~~~~~~~~~~~~~~~~~ 377 (450)
++|++|+.|++.++...+.+.++.++++ +.++++.--+.|.+++..+..++.|...|
T Consensus 656 ~~i~~nl~~a~~~n~~~i~~a~~~~~~~~g~~l~p~~a~~~m~~ss~~vv~nslrl~~~ 714 (723)
T 3j09_A 656 SKIKQNIFWALIYNVILIPAAAGLLYPIFGVVFRPEFAGLAMAMSSVSVVANSLLLRNY 714 (723)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSSCCCCSCCHHHHHHHHHTHHHHHHHHTTSCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhccccccCHHHHHHHHhccHHHHHHHHHHhccC
Confidence 9999999999999888888877665532 24455555567778888787777666544
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-48 Score=420.02 Aligned_cols=312 Identities=24% Similarity=0.292 Sum_probs=257.5
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcccEEEEec
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLP 80 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~l~~~p 80 (450)
||++|++|||||||||+|+|+|.++.. .+.+.++++.+++.++..++| |++.|++.++.+.+............|
T Consensus 323 lg~v~~i~fDKTGTLT~~~~~v~~~~~----~~~~~~~~l~~aa~~e~~s~h-Pla~Aiv~~a~~~g~~~~~~~~~~~~~ 397 (645)
T 3j08_A 323 AEKVTAVIFDKTGTLTKGKPEVTDLVP----LNGDERELLRLAAIAERRSEH-PIAEAIVKKALEHGIELGEPEKVEVIA 397 (645)
T ss_dssp GGGCCEEEEEGGGTSSSSCCEEEEEEE----SSSCHHHHHHHHHHHHTTCCS-HHHHHHHHHHHHTTCCCCSCCCCEEET
T ss_pred hhCCCEEEEcCcccccCCCeEEEEEEe----CCCCHHHHHHHHHHHhhcCCC-hhHHHHHHHHHhcCCCcCCccceEEec
Confidence 689999999999999999999999763 256889999999999888765 999999987653221111111111111
Q ss_pred cCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcCChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCCcEE
Q 013069 81 FDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQF 160 (450)
Q Consensus 81 F~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~~~ 160 (450)
++. +. ...+.+|+++.+.+.. ...++.+....++++.+|+|+++++++. ++
T Consensus 398 -----g~g-~~-------~~~v~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~l~va~~~-------------~~ 448 (645)
T 3j08_A 398 -----GEG-VV-------ADGILVGNKRLMEDFG---VAVSNEVELALEKLEREAKTAVIVARNG-------------RV 448 (645)
T ss_dssp -----TTE-EE-------ETTEEEECHHHHHHTT---CCCCHHHHHHHHHHHTTTCCCEEEEETT-------------EE
T ss_pred -----CCc-eE-------EEEEEECCHHHHHhcC---CCccHHHHHHHHHHHhcCCeEEEEEECC-------------EE
Confidence 111 00 0236689998876633 2334567778889999999999999875 99
Q ss_pred EEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcc
Q 013069 161 IGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240 (450)
Q Consensus 161 lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (450)
+|+++++|++|++++++|++|+++|++++|+|||+..+|..+++++|+. .
T Consensus 449 ~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~------------------------------~ 498 (645)
T 3j08_A 449 EGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------L 498 (645)
T ss_dssp EEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------E
T ss_pred EEEEEecCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC------------------------------E
Confidence 9999999999999999999999999999999999999999999999995 4
Q ss_pred ceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHHHHHH
Q 013069 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIF 320 (450)
Q Consensus 241 v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~~~ 320 (450)
+|++++|++|.++|+.+++. +.|+|+|||.||+|||+.||+||+|+++++.++++||+|+.++++++++.++++||+++
T Consensus 499 ~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~ 577 (645)
T 3j08_A 499 VIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTM 577 (645)
T ss_dssp EECSCCTTCHHHHHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEECCCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHH
T ss_pred EEEeCCHHhHHHHHHHHhhC-CeEEEEeCCHhHHHHHHhCCEEEEeCCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHH
Confidence 79999999999999999988 89999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccc--ccHHHHHHHHHhccCcccccchhHHHHHH
Q 013069 321 QRMRNYMVRGIDGLSSTEFIQVLELNFL--FTLDTVIAILQTAFTSKKDFGKEERELLW 377 (450)
Q Consensus 321 ~~i~~~~~~~~~~~~~~i~l~~~~~~~~--~pl~~~~~l~~~~~~~~~~~~~~~~~~~~ 377 (450)
+||++|+.|++.++...+.+.++.++++ +.++++.--+.|.+++..+..++.|...|
T Consensus 578 ~~i~~nl~~a~~~N~~~i~la~~~~~~~~g~~l~p~~a~~~m~~ss~~vv~nslrl~~~ 636 (645)
T 3j08_A 578 SKIKQNIFWALIYNVILIPAAAGLLYPIFGVVFRPEFAGLAMAMSSVSVVANSLLLRNY 636 (645)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTTTTTCCCSCCHHHHHHHHHTHHHHHHHHTTSCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhhcccccCHHHHHHHHhcchHHHHHhhHHhccC
Confidence 9999999999999888888877665432 23455555567777887777777666544
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-34 Score=277.93 Aligned_cols=239 Identities=21% Similarity=0.302 Sum_probs=189.1
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcccEEEEec
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLP 80 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~l~~~p 80 (450)
|+++++||||||||||+|+|.|.++. +.++++.+++..+..++| |++.|+..++.+.+........+..++
T Consensus 25 l~~i~~v~fDktGTLT~g~~~v~~~~--------~~~~~l~~~~~~e~~s~h-p~a~ai~~~~~~~g~~~~~~~~~~~~~ 95 (263)
T 2yj3_A 25 IKEIDTIIFEKTGTLTYGTPIVTQFI--------GDSLSLAYAASVEALSSH-PIAKAIVKYAKEQGVKILEVKDFKEIS 95 (263)
Confidence 57899999999999999999998742 567788888888887666 999999887653211100001111111
Q ss_pred cCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcCChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCCcEE
Q 013069 81 FDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQF 160 (450)
Q Consensus 81 F~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~~~ 160 (450)
-.+.. .. .++ ..+..|+++ +|.+ +.++++. .+
T Consensus 96 G~g~~----~~---~~~--~~~~~G~~~-------------------------~~~~-~~~~~~~-------------~~ 127 (263)
T 2yj3_A 96 GIGVR----GK---ISD--KIIEVKKAE-------------------------NNND-IAVYING-------------EP 127 (263)
Confidence 00000 00 001 111122221 3445 6666665 89
Q ss_pred EEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcc
Q 013069 161 IGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240 (450)
Q Consensus 161 lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (450)
.|.+.+.|+++|++.++|+.|++.|++++|+|||+...+..+++.+|+. +
T Consensus 128 ~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~------------------------------~ 177 (263)
T 2yj3_A 128 IASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQ------------------------------E 177 (263)
Confidence 9999999999999999999999999999999999999999999999985 3
Q ss_pred ceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHHHHHH
Q 013069 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIF 320 (450)
Q Consensus 241 v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~~~ 320 (450)
+|..+.|+.|..+++.++..+..|+|||||.||++|++.||+|++++++++.+.+.+|+++..+++..+..++.++|+++
T Consensus 178 ~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g~~~~~~~~~ad~v~~~~~l~~l~~~l~~~r~~~ 257 (263)
T 2yj3_A 178 YYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMGNGVDISKNVADIILVSNDIGTLLGLIKNRKRLS 257 (263)
Confidence 57888899999999999998899999999999999999999999999888889999999999999999999999999999
Q ss_pred HHHHHH
Q 013069 321 QRMRNY 326 (450)
Q Consensus 321 ~~i~~~ 326 (450)
++|++|
T Consensus 258 ~~i~~n 263 (263)
T 2yj3_A 258 NAIPSN 263 (263)
Confidence 999986
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.8e-28 Score=234.71 Aligned_cols=267 Identities=30% Similarity=0.396 Sum_probs=203.3
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcccEEEEec
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLP 80 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~l~~~p 80 (450)
|++++.||||+|||||.|+|+|.++.. + .+ +.++++.+++..+....+ ++..++..++...+........+..++
T Consensus 10 ~~~ik~i~FD~DGTL~d~~~~v~~~~~--~-~~-~~~~~~~~~~~~~~~s~~-~~~~a~~~~~~~~g~~~~~~~~~~~~~ 84 (280)
T 3skx_A 10 AKDLQAVIFDKTGTLTEGRFGVTDIVG--F-NH-SEDELLQIAASLEARSEH-PIAAAIVEEAEKRGFGLTEVEEFRAIP 84 (280)
T ss_dssp GGGCCEEEEECCCCCEEEEEEEEEEEE--S-SS-CHHHHHHHHHHHHTTCCS-HHHHHHHHHHHHTTCCCCCCEEEEEET
T ss_pred hcCCCEEEEeCCCcCCCCcEEEEEEEe--c-CC-CHHHHHHHHHHhhccCCC-HHHHHHHHHHHhcCCCCCCccceeecC
Confidence 578999999999999999999998652 2 23 888999999888877665 899888877643221111222222222
Q ss_pred cCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcCChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCCcEE
Q 013069 81 FDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQF 160 (450)
Q Consensus 81 F~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~~~ 160 (450)
.. ..... .++. .+..|+++.+........ ....++..++.+.+.+++.. .+
T Consensus 85 g~----~~~~~---~~~~--~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~-------------~~ 135 (280)
T 3skx_A 85 GK----GVEGI---VNGR--RYMVVSPGYIRELGIKTD-------ESVEKLKQQGKTVVFILKNG-------------EV 135 (280)
T ss_dssp TT----EEEEE---ETTE--EEEEECHHHHHHTTCCCC-------TTHHHHHTTTCEEEEEEETT-------------EE
T ss_pred CC----EEEEE---ECCE--EEEEecHHHHHHcCCCch-------HHHHHHHhCCCeEEEEEECC-------------EE
Confidence 11 11111 1332 334578877766443221 23456677888888887765 89
Q ss_pred EEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcc
Q 013069 161 IGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240 (450)
Q Consensus 161 lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (450)
+|.+.+.++++|++.++++.|++.|+++.++||++...+..+.+.+|+. .
T Consensus 136 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~------------------------------~ 185 (280)
T 3skx_A 136 SGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLD------------------------------D 185 (280)
T ss_dssp EEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------E
T ss_pred EEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCh------------------------------h
Confidence 9999999999999999999999999999999999999999999999985 3
Q ss_pred ceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHHHHHH
Q 013069 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIF 320 (450)
Q Consensus 241 v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~~~ 320 (450)
.|..+.|.+|...++.+.+.. .|+||||+.||++|++.|++|++|+++.+..+..||+++..+++.++..++..+|+++
T Consensus 186 ~f~~~~~~~k~~~~k~~~~~~-~~~~vGD~~nDi~~~~~Ag~~va~~~~~~~~~~~a~~~~~~~~~~~l~~~l~~~~~~~ 264 (280)
T 3skx_A 186 YFAEVLPHEKAEKVKEVQQKY-VTAMVGDGVNDAPALAQADVGIAIGAGTDVAVETADIVLVRNDPRDVAAIVELSRKTY 264 (280)
T ss_dssp EECSCCGGGHHHHHHHHHTTS-CEEEEECTTTTHHHHHHSSEEEECSCCSSSCCCSSSEECSSCCTHHHHHHHHHHHTCC
T ss_pred HhHhcCHHHHHHHHHHHHhcC-CEEEEeCCchhHHHHHhCCceEEecCCcHHHHhhCCEEEeCCCHHHHHHHHHHHHHHH
Confidence 588889999999999998776 5699999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 013069 321 QRMRNYMVRGID 332 (450)
Q Consensus 321 ~~i~~~~~~~~~ 332 (450)
.++++++.|++.
T Consensus 265 ~~~~~n~~~~~~ 276 (280)
T 3skx_A 265 SKFHGLSAWSHP 276 (280)
T ss_dssp C-----------
T ss_pred HHHHHHHHHHHh
Confidence 999999999875
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.95 E-value=4.2e-28 Score=236.89 Aligned_cols=259 Identities=27% Similarity=0.409 Sum_probs=198.2
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcccEEEEec
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLP 80 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~l~~~p 80 (450)
|+++++||||||||||.+.+.+.++.. . .+ +.++++.+++..+..++| |++.++..++...+........+..++
T Consensus 29 l~~i~~viFD~dGTL~ds~~~~~~~~~--~-~~-~~~~~l~~~~~~e~~s~h-p~~~a~~~~~~~~g~~~~~~~~~~~~~ 103 (287)
T 3a1c_A 29 AEKVTAVIFDKTGTLTKGKPEVTDLVP--L-NG-DERELLRLAAIAERRSEH-PIAEAIVKKALEHGIELGEPEKVEVIA 103 (287)
T ss_dssp HHHCCEEEEECCCCCBCSCCEEEEEEE--S-SS-CHHHHHHHHHHHTTTCCS-HHHHHHHHHHHHTTCCCCCCSCEEEET
T ss_pred hhcCCEEEEeCCCCCcCCCEEEEEEEe--C-CC-CHHHHHHHHHHHhhcCCC-HHHHHHHHHHHhcCCCccccccceeec
Confidence 467899999999999999999987653 2 34 788999999998887665 999999887643211100111111111
Q ss_pred cCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcCChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCCcEE
Q 013069 81 FDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQF 160 (450)
Q Consensus 81 F~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~~~ 160 (450)
-. ++ .. ..+.+|+++.+.+... ..++.+....+.+..+|.++++++++. .+
T Consensus 104 G~------~~--~~-----~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~i~~~~d~-------------~~ 154 (287)
T 3a1c_A 104 GE------GV--VA-----DGILVGNKRLMEDFGV---AVSNEVELALEKLEREAKTAVIVARNG-------------RV 154 (287)
T ss_dssp TT------EE--EE-----TTEEEECHHHHHHTTC---CCCHHHHHHHHHHHHTTCEEEEEEETT-------------EE
T ss_pred CC------Ce--EE-----EEEEECCHHHHHhcCC---CccHHHHHHHHHHHhCCCeEEEEEECC-------------EE
Confidence 00 00 00 1245677766544221 111335566778888999999999876 89
Q ss_pred EEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcc
Q 013069 161 IGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240 (450)
Q Consensus 161 lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (450)
++.+...++++|++.++|+.|++.|+++.++||++...+..+.+.+|+. .
T Consensus 155 ~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~------------------------------~ 204 (287)
T 3a1c_A 155 EGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------L 204 (287)
T ss_dssp EEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------E
T ss_pred EEEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCc------------------------------e
Confidence 9999999999999999999999999999999999999999999999985 3
Q ss_pred ceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHHHHHH
Q 013069 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIF 320 (450)
Q Consensus 241 v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~~~ 320 (450)
.|..+.|..|...++.++.. ..|+||||+.||++|.+.|+++++++++.+..+..+|+++.++++..+..++..+|+++
T Consensus 205 ~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v~~~~~~~~~~~~ad~v~~~~~~~~l~~~l~~~~~~~ 283 (287)
T 3a1c_A 205 VIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTM 283 (287)
T ss_dssp EECSCCTTCHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEEEECCCSCCSSCCSSEEESSSCTHHHHHHHHTTC---
T ss_pred eeeecChHHHHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCeeEEeCCCCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHH
Confidence 57777899999999999888 89999999999999999999999998776667788999998889999999999999999
Q ss_pred HHHH
Q 013069 321 QRMR 324 (450)
Q Consensus 321 ~~i~ 324 (450)
++|+
T Consensus 284 ~~i~ 287 (287)
T 3a1c_A 284 SKIK 287 (287)
T ss_dssp ----
T ss_pred HhhC
Confidence 9885
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.2e-20 Score=169.98 Aligned_cols=138 Identities=23% Similarity=0.345 Sum_probs=117.8
Q ss_pred CCCChHHHHHHHHHhc--ccCCCChHHHHHHHhhcCch--hhhhcccEEEEeccCCCCceEEEEEEccCCeEEEEEcCCH
Q 013069 32 GGVDADTVVLMAARAS--QVENLDVIDAAIVGMLADPK--EARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSP 107 (450)
Q Consensus 32 ~~~~~~~il~~aa~~~--~~~~~~pi~~ai~~~~~~~~--~~~~~~~~l~~~pF~~~~kr~svi~~~~~g~~~~~~KGa~ 107 (450)
.|.+.++++.+|+.++ .....||+|.||+.++.... ..+..|+.+..+||+|.+|||++++...+|+.++++||||
T Consensus 11 ~G~~~~~vl~~a~L~s~~~~~~~n~~d~Ail~~~~~~~~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGAp 90 (170)
T 3gwi_A 11 SGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGAL 90 (170)
T ss_dssp TSCBCHHHHHHHHHHHHHCCSCCCHHHHHHHHTSCHHHHHHHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEECH
T ss_pred CCCCHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhcChhhhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCCc
Confidence 5788999999999998 55667899999999875322 2357899999999999999999999877788899999999
Q ss_pred HHHHhhhcC----------ChhhHHHHHHHHHHHHHhcchhhhhhceecCCCC---cCCCCCCcEEEEeccCCCC
Q 013069 108 EQILNLLHN----------KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGS---KESSGSPWQFIGLIPLFDP 169 (450)
Q Consensus 108 ~~i~~~~~~----------~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~---~~~~e~~~~~lG~i~l~D~ 169 (450)
|.|+++|.. +++.++.+.+.+++|+++|+|||+|||+.++..+ ....|++|+|+|+++|.|.
T Consensus 91 E~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~~~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 91 QEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDH 165 (170)
T ss_dssp HHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSCCCGGGSCSEEEEEEEEEEC-
T ss_pred HHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccccCccccCCcEEEehhccccc
Confidence 999999973 4566788999999999999999999999987653 2346899999999999885
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.76 E-value=4.5e-19 Score=173.61 Aligned_cols=145 Identities=12% Similarity=0.026 Sum_probs=114.3
Q ss_pred CCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC--CccccCCchhhhhhcCChhHHhhhcccee
Q 013069 166 LFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP--SSALSGQDRDESIVALPVDELIEKADGFA 243 (450)
Q Consensus 166 l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~v~a 243 (450)
..+++|++++++++.|+++|++++|+|||...++.++++++|+...... ...+...+.. ...... -...+.++
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~-~~~~~~----~~~i~~~~ 212 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENG-VLKGFK----GELIHVFN 212 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEECTTS-BEEEEC----SSCCCTTC
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEcccc-eeEecc----ccccchhh
Confidence 4579999999999999999999999999999999999999998643210 0001000000 000000 01124578
Q ss_pred ecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHh---hCCeeEEec-------cchHHHhhccCEEecCCCchHHHHHH
Q 013069 244 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALK---KADIGIAVA-------DATDAARSAADIVLTEPGLNVIITAV 313 (450)
Q Consensus 244 ~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~---~AdvGIa~~-------~~~~~a~~aaDivl~~~~l~~i~~~I 313 (450)
+..|.+|...+..++..++.|+|+|||+||+||++ .||+||+|| ++.+.+++++||||+++++..++.+|
T Consensus 213 k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~i 292 (297)
T 4fe3_A 213 KHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSI 292 (297)
T ss_dssp HHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHHH
T ss_pred cccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHHH
Confidence 88899999999999999999999999999999954 999999999 78999999999999999999999888
Q ss_pred HH
Q 013069 314 LI 315 (450)
Q Consensus 314 ~~ 315 (450)
..
T Consensus 293 l~ 294 (297)
T 4fe3_A 293 LQ 294 (297)
T ss_dssp HH
T ss_pred HH
Confidence 64
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.51 E-value=1.3e-14 Score=132.46 Aligned_cols=124 Identities=22% Similarity=0.398 Sum_probs=106.8
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhhHHHHHHH
Q 013069 177 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKH 256 (450)
Q Consensus 177 ~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~ 256 (450)
+|+.|++.|+++.++||+....+..+++.+|+. .+|..+ ..|...++.
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~------------------------------~~f~~~--~~K~~~~~~ 101 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIE------------------------------HLFQGR--EDKLVVLDK 101 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCS------------------------------EEECSC--SCHHHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCH------------------------------HHhcCc--CChHHHHHH
Confidence 899999999999999999999999999999995 233333 667777776
Q ss_pred Hhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCC----chHHHHHHHHHHHHHHHHHHHHH
Q 013069 257 LQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPG----LNVIITAVLISRAIFQRMRNYMV 328 (450)
Q Consensus 257 lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~----l~~i~~~I~~~R~~~~~i~~~~~ 328 (450)
+.+. ...|+|+||+.||++|++.|+++++++++.+.+++.||+++.+++ +..+.+.+..+|.++++|++++.
T Consensus 102 ~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~~~~~~~~~~ 181 (189)
T 3mn1_A 102 LLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAASFVREHAHGITRAQGGEGAAREFCELILSAQGNLEAAHSVYL 181 (189)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHTTS
T ss_pred HHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHccCcHHHHHHHHh
Confidence 6654 467999999999999999999999999999999999999998875 56678888889999999999988
Q ss_pred HHHH
Q 013069 329 RGID 332 (450)
Q Consensus 329 ~~~~ 332 (450)
|.+.
T Consensus 182 ~~~~ 185 (189)
T 3mn1_A 182 EGHH 185 (189)
T ss_dssp TTC-
T ss_pred cccc
Confidence 8654
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.42 E-value=2.1e-13 Score=135.42 Aligned_cols=151 Identities=15% Similarity=0.187 Sum_probs=108.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccce-eecC
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF-AGVF 246 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~-a~~~ 246 (450)
-++++++.++++.|++.|+++.|+||+....+..+.+.+|+..-......+...... ..+. .-..
T Consensus 177 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~t--------------g~~~~~~~~ 242 (335)
T 3n28_A 177 LPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLT--------------GQVLGEVVS 242 (335)
T ss_dssp CCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEE--------------EEEESCCCC
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCeee--------------eeecccccC
Confidence 378999999999999999999999999999999999999985210000000000000 0000 0012
Q ss_pred hhhHHHHH----HHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHHHHHHHH
Q 013069 247 PEHKYEIV----KHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQR 322 (450)
Q Consensus 247 P~~K~~iV----~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~~~~~ 322 (450)
+..|..++ +.++-....|+|+|||.||++|++.||+|++| ++.+.+++.||+++..+++.+++.++.......++
T Consensus 243 ~kpk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~-~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~r 321 (335)
T 3n28_A 243 AQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQK 321 (335)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTTC
T ss_pred hhhhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhhh
Confidence 23454444 44444456799999999999999999999999 89999999999999999999999999988777778
Q ss_pred HHHHHHHHHHH
Q 013069 323 MRNYMVRGIDG 333 (450)
Q Consensus 323 i~~~~~~~~~~ 333 (450)
|++|+.|++.+
T Consensus 322 ~~~~~~~~~~~ 332 (335)
T 3n28_A 322 LSWKSKEGHHH 332 (335)
T ss_dssp CCCC-------
T ss_pred hcccccccccc
Confidence 88888777543
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=3.2e-13 Score=119.39 Aligned_cols=140 Identities=21% Similarity=0.280 Sum_probs=98.4
Q ss_pred cccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCc-hhhhhccc--EEEEeccCCCCce
Q 013069 11 KTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADP-KEARADIQ--EVHFLPFDPTGKR 87 (450)
Q Consensus 11 KTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~-~~~~~~~~--~l~~~pF~~~~kr 87 (450)
..||+|.|++.|..+.. ..|.++++++.+|++++..+.| |+++||+.++... +....... ...+.||++..++
T Consensus 13 ~~~tit~gnr~vt~v~~---~~g~~e~elL~lAAs~E~~SeH-Pla~AIv~~A~~~~~l~~~~~~~~~~~~~~F~a~~G~ 88 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIP---AQGVDEKTLADAAQLASLADET-PEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRM 88 (156)
T ss_dssp --------CEEEEEEEE---CTTSCHHHHHHHHHHTTSSCCS-HHHHHHHHHHHHHTTCCCCCHHHHTCEEEEEETTTTE
T ss_pred CCCceecCCCeEEEEEe---cCCCCHHHHHHHHHHHhCcCCC-HHHHHHHHHHHHhcCCCcccccccccceeeccccCCC
Confidence 47999999999998642 3578999999999999988766 9999999887532 11111110 2346799998887
Q ss_pred EEEEEEccCCeEEEEEcCCHHHHHhhhcC-ChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCCcEEEEeccC
Q 013069 88 TALTYIDSEGKMHRVTKGSPEQILNLLHN-KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPL 166 (450)
Q Consensus 88 ~svi~~~~~g~~~~~~KGa~~~i~~~~~~-~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l 166 (450)
.++.+ +| ..+.+|+++.|..++.. ...++..+.+.+++++.+|.++++||.+. +++|+|++
T Consensus 89 ~Gv~v---~G--~~v~vGn~~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA~d~-------------~l~GvIal 150 (156)
T 1svj_A 89 SGINI---DN--RMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS-------------RVLGVIAL 150 (156)
T ss_dssp EEEEE---TT--EEEEEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEE
T ss_pred CeEEE---CC--EEEEEeCcHHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEEECC-------------EEEEEEEE
Confidence 77743 56 56889998877666532 12233457778899999999999999875 99999999
Q ss_pred CCCCCc
Q 013069 167 FDPPIH 172 (450)
Q Consensus 167 ~D~lr~ 172 (450)
.|++|+
T Consensus 151 aD~iK~ 156 (156)
T 1svj_A 151 KDIVKG 156 (156)
T ss_dssp EECCCC
T ss_pred ecCCCC
Confidence 999996
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=1.4e-12 Score=117.79 Aligned_cols=130 Identities=20% Similarity=0.176 Sum_probs=104.4
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhhH
Q 013069 171 IHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHK 250 (450)
Q Consensus 171 r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K 250 (450)
.+.+.++|+.|++.|++++++||++...+..+.+.+|+.. .|.. ...|
T Consensus 37 ~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~------------------------------~~~~--~k~k 84 (180)
T 1k1e_A 37 HVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL------------------------------FFLG--KLEK 84 (180)
T ss_dssp EHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE------------------------------EEES--CSCH
T ss_pred ccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce------------------------------eecC--CCCc
Confidence 3567799999999999999999999999999999999852 2322 2456
Q ss_pred HHHHHHHhhc-C---CEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHH----HHHHHHHHHHHH
Q 013069 251 YEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVII----TAVLISRAIFQR 322 (450)
Q Consensus 251 ~~iV~~lq~~-g---~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~----~~I~~~R~~~~~ 322 (450)
...++.+.+. + ..|+||||+.||++|++.|+++++++++.+.+++.||+++.+++..+++ +.+...|..+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~~~~ 164 (180)
T 1k1e_A 85 ETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSV 164 (180)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHH
T ss_pred HHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeCCccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcCchhh
Confidence 6666655433 3 6799999999999999999999999999999999999999988776666 344456667888
Q ss_pred HHHHHHHHHH
Q 013069 323 MRNYMVRGID 332 (450)
Q Consensus 323 i~~~~~~~~~ 332 (450)
++.++.|+..
T Consensus 165 ~~~~~~~~~~ 174 (180)
T 1k1e_A 165 FDTAQGFLKS 174 (180)
T ss_dssp HHCHHHHHHH
T ss_pred hhhccchhhh
Confidence 8877777653
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.36 E-value=1.4e-12 Score=119.16 Aligned_cols=123 Identities=19% Similarity=0.251 Sum_probs=100.2
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeec--ChhhHHHHH
Q 013069 177 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV--FPEHKYEIV 254 (450)
Q Consensus 177 ~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~--~P~~K~~iV 254 (450)
+|+.|++.|+++.++||+....+..+.+.+|+.. +|..+ .|+-...++
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~------------------------------~~~~~kpk~~~~~~~~ 103 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH------------------------------YYKGQVDKRSAYQHLK 103 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE------------------------------EECSCSSCHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc------------------------------ceeCCCChHHHHHHHH
Confidence 4999999999999999999999999999999962 23333 344444555
Q ss_pred HHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchH----HHHHHHHHHHHHHHHHHHHHH
Q 013069 255 KHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV----IITAVLISRAIFQRMRNYMVR 329 (450)
Q Consensus 255 ~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~----i~~~I~~~R~~~~~i~~~~~~ 329 (450)
+.+.-....|+|+||+.||++|++.|+++++++++.+.++..||+++.+++..+ +.+.+...|..|+++.++++|
T Consensus 104 ~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~~~~~~~~~ 182 (191)
T 3n1u_A 104 KTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELAITGYLK 182 (191)
T ss_dssp HHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred HHhCCCHHHEEEECCCHHHHHHHHHCCCEEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHh
Confidence 555555667999999999999999999999999999999999999999888554 556666677788888777665
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.34 E-value=5.2e-12 Score=118.59 Aligned_cols=148 Identities=20% Similarity=0.131 Sum_probs=106.5
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--CCcccc---CCch-h-hhh------------
Q 013069 167 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSALS---GQDR-D-ESI------------ 227 (450)
Q Consensus 167 ~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~--~~~~l~---~~~~-~-~~~------------ 227 (450)
...+.+.+.++|++|++.|++++++||+....+..+++.+|+....+ ++..+. +... . ..+
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~ 99 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 99 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHH
Confidence 34578899999999999999999999999999999999999864211 111111 1110 0 000
Q ss_pred -----------------------hcCChhHHhhh-------ccceeecCh--hhHHHHHHHHhhc----CCEEEEecCCC
Q 013069 228 -----------------------VALPVDELIEK-------ADGFAGVFP--EHKYEIVKHLQAR----NHICGMIGNGV 271 (450)
Q Consensus 228 -----------------------~~~~~~~~~~~-------~~v~a~~~P--~~K~~iV~~lq~~----g~~v~~iGDG~ 271 (450)
......++.+. ...+.++.| .+|...++.+.+. ...|+++||+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~ 179 (227)
T 1l6r_A 100 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 179 (227)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred hcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcH
Confidence 00000011110 111234445 6899998888764 24699999999
Q ss_pred CChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 272 NDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 272 ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
||.+|++.|++|++|+++.+.+++.||+++.+++..++.++|+
T Consensus 180 nD~~m~~~ag~~va~~n~~~~~k~~a~~v~~~~~~~Gv~~~l~ 222 (227)
T 1l6r_A 180 NDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFK 222 (227)
T ss_dssp GGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHH
T ss_pred HhHHHHHHcCceEEecCchHHHHHhCCEEecCCCCcHHHHHHH
Confidence 9999999999999999999999999999999999999998886
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.33 E-value=1e-12 Score=120.81 Aligned_cols=103 Identities=20% Similarity=0.332 Sum_probs=86.3
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhhHHHHHH
Q 013069 176 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVK 255 (450)
Q Consensus 176 ~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~ 255 (450)
..|+.|++.|+++.++||++...+..+++.+|+. .+|... ..|...++
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~------------------------------~~~~~~--k~k~~~~~ 106 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGIS------------------------------LIYQGQ--DDKVQAYY 106 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCC------------------------------EEECSC--SSHHHHHH
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCc------------------------------EEeeCC--CCcHHHHH
Confidence 3599999999999999999999999999999985 223333 45666665
Q ss_pred HHhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHH
Q 013069 256 HLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVII 310 (450)
Q Consensus 256 ~lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~ 310 (450)
.+.+. ...|+|+||+.||++|++.|+++++|+++.+.+++.||+|+..++-.+++
T Consensus 107 ~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~na~~~~~~~ad~v~~~~~~~G~~ 165 (195)
T 3n07_A 107 DICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLLAQRANYVTHIKGGHGAV 165 (195)
T ss_dssp HHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCHHHHHHCSEECSSCTTTTHH
T ss_pred HHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEECChHHHHHHhCCEEEcCCCCCCHH
Confidence 55443 45799999999999999999999999999999999999999988766643
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.30 E-value=2.2e-12 Score=115.73 Aligned_cols=111 Identities=23% Similarity=0.196 Sum_probs=89.3
Q ss_pred EEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHH--HhCCCCCCCCCccccCCchhhhhhcCChhHHh
Q 013069 159 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGR--RLGMGTNMYPSSALSGQDRDESIVALPVDELI 236 (450)
Q Consensus 159 ~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~--~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 236 (450)
+.++.+.+.|. .+|+.|++.|+++.|+||+ ..+..+++ .+|+.
T Consensus 32 ~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~--------------------------- 76 (168)
T 3ewi_A 32 KEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK--------------------------- 76 (168)
T ss_dssp CCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC---------------------------
T ss_pred CEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE---------------------------
Confidence 45666666665 3899999999999999999 67778888 45552
Q ss_pred hhccceeecChhhHHHHHHHHhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHH
Q 013069 237 EKADGFAGVFPEHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVII 310 (450)
Q Consensus 237 ~~~~v~a~~~P~~K~~iV~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~ 310 (450)
+|. .+.+|...++.+.+. ...|+|+||+.||++|++.|+++++|+++.+.+++.||+|+..++-.+++
T Consensus 77 ----~~~--g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~na~~~~k~~Ad~v~~~~~~~G~~ 148 (168)
T 3ewi_A 77 ----TEV--SVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADACSGAQKAVGYICKCSGGRGAI 148 (168)
T ss_dssp ----EEC--SCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECTTCCHHHHTTCSEECSSCTTTTHH
T ss_pred ----EEE--CCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeCChhHHHHHhCCEEeCCCCCccHH
Confidence 122 235688887776654 35699999999999999999999999999999999999999988877744
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.28 E-value=9.7e-12 Score=115.64 Aligned_cols=100 Identities=24% Similarity=0.320 Sum_probs=87.0
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhhHHHHHHH
Q 013069 177 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKH 256 (450)
Q Consensus 177 ~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~ 256 (450)
+|+.|++.|+++.++||++...+..+++.+|+. .+|..+ ..|..+++.
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~------------------------------~~f~~~--k~K~~~l~~ 131 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGIT------------------------------HLYQGQ--SDKLVAYHE 131 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCC------------------------------EEECSC--SSHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc------------------------------hhhccc--CChHHHHHH
Confidence 899999999999999999999999999999995 234444 567777776
Q ss_pred Hhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchH
Q 013069 257 LQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV 308 (450)
Q Consensus 257 lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~ 308 (450)
+.+. ...|+|+||+.||++|++.|+++++++++.+.++..||+|+.+++-.+
T Consensus 132 ~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~~~~~~~~~Ad~v~~~~~~~G 187 (211)
T 3ij5_A 132 LLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKAHYVTRIKGGRG 187 (211)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTT
T ss_pred HHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeCCccHHHHhhCCEEEeCCCCCc
Confidence 6554 567999999999999999999999999999999999999999886554
|
| >2o98_P H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, electrochemical proton G cell turgor, regulation, protein binding; HET: FSC; 2.70A {Nicotiana plumbaginifolia} | Back alignment and structure |
|---|
Probab=99.27 E-value=5.8e-13 Score=94.73 Aligned_cols=51 Identities=71% Similarity=1.076 Sum_probs=49.3
Q ss_pred cccccchhHHHHHhhhhHHhhhhhhcccchhhhhhhccCCChhhhhccccC
Q 013069 400 SYGELSWMAEEARRRAEIARLRELHTLKGHVESLIRLKGLDIDAIQQSYSV 450 (450)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (450)
+|.+++++++++++|+|++|||++|+++|++|+++|++|+|+++++++|||
T Consensus 2 s~~~~s~~ae~a~~raeiarL~~~~sl~~~~es~~kl~g~dl~~~~~~~tv 52 (52)
T 2o98_P 2 NFNELNQLAEEAKRRAEIARQRELHTLKGHVESVVKLKGLDIETIQQSYDI 52 (52)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHTCCCCCCCCCCCC
T ss_pred chhHHHHHHHHhcCcceeeccccchhHHHHHHhhHhhhhhhHhhcccccCC
Confidence 577899999999999999999999999999999999999999999999997
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.26 E-value=1.9e-11 Score=110.08 Aligned_cols=105 Identities=27% Similarity=0.333 Sum_probs=88.8
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhhHHHHHHH
Q 013069 177 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKH 256 (450)
Q Consensus 177 ~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~ 256 (450)
+|+.|++.|+++.++||+....+..+++.+|+. +|... ..|...++.
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-------------------------------~~~~~--~~k~~~l~~ 93 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-------------------------------VLHGI--DRKDLALKQ 93 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-------------------------------EEESC--SCHHHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-------------------------------eEeCC--CChHHHHHH
Confidence 899999999999999999999999999999984 13332 557777766
Q ss_pred Hhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 257 LQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 257 lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
+.+. ...|+|+||+.||++|++.|+++++++++.+.++..||+++.+++..+++..+.
T Consensus 94 ~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~~~~~~~~~~ad~v~~~~~~~g~~~~l~ 155 (176)
T 3mmz_A 94 WCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTTVPGGDGAIREIA 155 (176)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHH
T ss_pred HHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEECCChhHHHHHhCCEEecCCCCCcHHHHHH
Confidence 6544 367999999999999999999999999999999999999999988777665443
|
| >3m50_P N.plumbaginifolia H+-translocating ATPase mRNA; all helical, protein-protein complex, protein binding; HET: EBT; 2.60A {Nicotiana plumbaginifolia} PDB: 3m51_P* 4dx0_P* | Back alignment and structure |
|---|
Probab=99.24 E-value=7.8e-13 Score=80.81 Aligned_cols=30 Identities=73% Similarity=1.211 Sum_probs=29.3
Q ss_pred hhhhcccchhhhhhhccCCChhhhhccccC
Q 013069 421 RELHTLKGHVESLIRLKGLDIDAIQQSYSV 450 (450)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (450)
|++|||+||+||++||||+|+++||++|||
T Consensus 2 rElhTLkghvESv~KLKglDi~~i~~~yTV 31 (31)
T 3m50_P 2 RELHTLKGHVEAVVKLKGLDIETIQQSYDI 31 (31)
T ss_dssp HHHHCHHHHHHHHHHHTTCCSCCCCCCCCC
T ss_pred chhhHHHHHHHHHHHHhcCChhhhhhcccC
Confidence 789999999999999999999999999997
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.14 E-value=1.1e-10 Score=119.27 Aligned_cols=140 Identities=19% Similarity=0.231 Sum_probs=106.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccce-eecCh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF-AGVFP 247 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~-a~~~P 247 (450)
++.|++.+.++.|++.|+++.++||.....+..+.+.+|+.....+...+.+.... ..+. .-..+
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg~~t--------------g~~~~~v~~~ 321 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTLT--------------GRVVGPIIDR 321 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETTEEE--------------EEECSSCCCH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCCEEE--------------eeEccCCCCC
Confidence 78999999999999999999999999999999999999985210000000000000 0000 01125
Q ss_pred hhHHHHHHHHhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHHHHHHHHH
Q 013069 248 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRM 323 (450)
Q Consensus 248 ~~K~~iV~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~~~~~i 323 (450)
..|..+++.+.+. ...|+||||+.||.+|++.|++|+++ ++.+..++.||+++..+++.+++.++..+|.-+...
T Consensus 322 kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~-~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~~~~~ 400 (415)
T 3p96_A 322 AGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF-NAKPALREVADASLSHPYLDTVLFLLGVTRGEIEAA 400 (415)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHHHHHH
T ss_pred cchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE-CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHHHHHh
Confidence 6677777666543 35699999999999999999999999 788999999999999999999999999888766554
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=7.9e-11 Score=104.11 Aligned_cols=106 Identities=26% Similarity=0.285 Sum_probs=86.8
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhhHHHHHHH
Q 013069 177 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKH 256 (450)
Q Consensus 177 ~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~ 256 (450)
+|+.|++.|+++.++||+....+..+.+.+|+.. .|... ..|...++.
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~------------------------------~~~~~--kpk~~~~~~ 86 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY------------------------------LFQGV--VDKLSAAEE 86 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE------------------------------EECSC--SCHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE------------------------------eeccc--CChHHHHHH
Confidence 7999999999999999999999999999999852 23333 345555544
Q ss_pred Hhh----cCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchH-HHHHHH
Q 013069 257 LQA----RNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV-IITAVL 314 (450)
Q Consensus 257 lq~----~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~-i~~~I~ 314 (450)
+.+ ....|+|+||+.||++|++.|+++++++++.+.+++.||+++.+++..+ +.+++.
T Consensus 87 ~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~e~~~ 149 (164)
T 3e8m_A 87 LCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLSTIFLEKRGGEGVFREFVE 149 (164)
T ss_dssp HHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECCTTSCHHHHTTCSSCCCCCTTTTHHHHHHH
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcCChHHHHHHhCcEEeccCCCCcHHHHHHH
Confidence 433 3457999999999999999999999999999999999999999988666 555444
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.13 E-value=9.8e-11 Score=107.24 Aligned_cols=133 Identities=20% Similarity=0.210 Sum_probs=96.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcccee-ecC
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA-GVF 246 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a-~~~ 246 (450)
-++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+..-. . .++...+. .. ...+.. ...
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f-~-~~~~~~~~--~~----------~~~~~~~~~~ 139 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAF-S-NTLIVEND--AL----------NGLVTGHMMF 139 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEE-E-EEEEEETT--EE----------EEEEEESCCS
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhc-c-ceeEEeCC--EE----------EeeeccCCCC
Confidence 358899999999999999999999999999999999999985210 0 00000000 00 000000 012
Q ss_pred hhhHHHHHHHHhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHH
Q 013069 247 PEHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 315 (450)
Q Consensus 247 P~~K~~iV~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~ 315 (450)
...|..+++.+.+. ...|+++||+.||++|++.|++++++ ++.+..++.||+++.+++|..+..++.+
T Consensus 140 ~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~-~~~~~l~~~ad~v~~~~dl~~~~~~~~~ 211 (217)
T 3m1y_A 140 SHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHCINEPDLALIKPLIEG 211 (217)
T ss_dssp TTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE-SCCHHHHTTCSEEECSSBGGGGTTC---
T ss_pred CCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE-CccHHHHHhcceeecccCHHHHHHHhcc
Confidence 45566666555443 35699999999999999999999999 8889999999999999999998877764
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.10 E-value=1.6e-10 Score=110.80 Aligned_cols=67 Identities=24% Similarity=0.285 Sum_probs=59.9
Q ss_pred hHHHHHHHHhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHH
Q 013069 249 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 315 (450)
Q Consensus 249 ~K~~iV~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~ 315 (450)
.|...++.+.+. ...|+++||+.||.+|++.|++|++|+|+.+.++++||+|+.+++-++|..+|+.
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 4dw8_A 197 DKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAADYITLTNDEDGVAEAIER 267 (279)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCcHHHHHhCCEEcCCCCCcHHHHHHHH
Confidence 688888777654 3459999999999999999999999999999999999999999999999988873
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.10 E-value=3.4e-10 Score=109.17 Aligned_cols=67 Identities=18% Similarity=0.182 Sum_probs=60.1
Q ss_pred hhHHHHHHHHhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 248 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 248 ~~K~~iV~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
..|...++.+.+. ...|+++||+.||.+|++.|++|++|+|+.+.+++.||+|+.+++-++|.++|+
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~s~~edGv~~~i~ 271 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKADWVTRSNDEQGVAYMMK 271 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcHHHHHhcCEECCCCCccHHHHHHH
Confidence 4588888777654 245999999999999999999999999999999999999999999999999887
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.05 E-value=5.9e-10 Score=107.65 Aligned_cols=67 Identities=22% Similarity=0.245 Sum_probs=60.2
Q ss_pred hhHHHHHHHHhhc-C---CEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 248 EHKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 248 ~~K~~iV~~lq~~-g---~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
..|...++.+.+. | ..|+++||+.||.+|++.|++||||+|+.+.+++.||+|+.+++-++|..+|+
T Consensus 210 ~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~s~~edGv~~~l~ 280 (283)
T 3dao_A 210 VSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQEVIAAAKHTCAPYWENGVLSVLK 280 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHHSSEEECCGGGTHHHHHHH
T ss_pred CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCHHHHHhcCeECCCCCCChHHHHHH
Confidence 3598888887664 2 45999999999999999999999999999999999999999999999998886
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.03 E-value=4e-10 Score=108.08 Aligned_cols=66 Identities=24% Similarity=0.274 Sum_probs=48.7
Q ss_pred hHHHHHHHHhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 249 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 249 ~K~~iV~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
+|...++.+.+. ...|+++||+.||.+|++.|++|++|+|+.+.++++||+|+.+++-++|..+|+
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 3mpo_A 197 SKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDEVKEAAQAVTLTNAENGVAAAIR 266 (279)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCHHHHHCSCBC------CHHHHHC
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHHHHHhcceeccCCCccHHHHHHH
Confidence 488888877654 245999999999999999999999999999999999999999999999998886
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.02 E-value=1e-09 Score=105.94 Aligned_cols=67 Identities=19% Similarity=0.214 Sum_probs=58.5
Q ss_pred hhHHHHHHHHhhc-C---CEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCE--EecCCCchHHHHHHH
Q 013069 248 EHKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADI--VLTEPGLNVIITAVL 314 (450)
Q Consensus 248 ~~K~~iV~~lq~~-g---~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDi--vl~~~~l~~i~~~I~ 314 (450)
..|...++.+.+. | ..|+++||+.||.+|++.|++||||+|+.+.++++||+ |+.+++-++|..+|+
T Consensus 208 ~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~vk~~A~~~~v~~sn~edGva~~i~ 280 (285)
T 3pgv_A 208 VSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKDLHPELEVIGSNADDAVPRYLR 280 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCTTSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCHHHHHhCCCCEecccCCcchHHHHHH
Confidence 4588888887654 2 45999999999999999999999999999999999984 777888999998886
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=99.01 E-value=3e-10 Score=112.53 Aligned_cols=143 Identities=13% Similarity=0.163 Sum_probs=97.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCc---h-----------hhhhhcCChhH
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQD---R-----------DESIVALPVDE 234 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~---~-----------~~~~~~~~~~~ 234 (450)
++++++.++++.|++ |+.+.++||+....+..+...+++..... ...+.... . +..+.....++
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~ 180 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGELH-GTEVDFDSIAVPEGLREELLSIIDVIASLSGEEL 180 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSEEE-EEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhhhc-ccccchhhhccccccceeEEecCHHHHhhhhHHH
Confidence 468999999999999 99999999999777777777777732111 00000000 0 00000000000
Q ss_pred H--hhh----c--ccee----ecChhhHHHHHHHHhhcC--CEEEEecCCCCChHhHhhC----CeeEEeccchHHHhhc
Q 013069 235 L--IEK----A--DGFA----GVFPEHKYEIVKHLQARN--HICGMIGNGVNDAPALKKA----DIGIAVADATDAARSA 296 (450)
Q Consensus 235 ~--~~~----~--~v~a----~~~P~~K~~iV~~lq~~g--~~v~~iGDG~ND~~al~~A----dvGIa~~~~~~~a~~a 296 (450)
+ +.. . ..+. -..+.+|...++.+.... +.|+++|||.||++|++.| ++||+| ++.+.+++.
T Consensus 181 l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na~~~lk~~ 259 (332)
T 1y8a_A 181 FRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NGNEYALKH 259 (332)
T ss_dssp HHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SCCHHHHTT
T ss_pred HHHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cCCHHHHhh
Confidence 0 000 0 1111 112567988888665443 5599999999999999999 999999 999999999
Q ss_pred cCEEecCCCchHHHHHHH
Q 013069 297 ADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 297 aDivl~~~~l~~i~~~I~ 314 (450)
||+|+.+++.++|..+|.
T Consensus 260 Ad~v~~~~~~dGV~~~l~ 277 (332)
T 1y8a_A 260 ADVVIISPTAMSEAKVIE 277 (332)
T ss_dssp CSEEEECSSTHHHHHHHH
T ss_pred CcEEecCCCCCHHHHHHH
Confidence 999999999999887776
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.00 E-value=1.1e-09 Score=103.82 Aligned_cols=66 Identities=21% Similarity=0.274 Sum_probs=58.3
Q ss_pred hHHHHHHHHhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 249 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 249 ~K~~iV~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
+|...++.+.+. ...|+++||+.||.+|++.|++|++|+|+.+.+++.||+|+.+++-++|.++|+
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~~~~~dGva~~i~ 252 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEEVKRVADFVTKPVDKEGIWYGLK 252 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEETTCCHHHHHTCSEEECCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeCCCcHHHHHhCCEEeCCCCcchHHHHHH
Confidence 577777766553 345999999999999999999999999999999999999999999999998886
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=7.1e-10 Score=100.53 Aligned_cols=128 Identities=22% Similarity=0.310 Sum_probs=89.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceee-cCh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG-VFP 247 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~-~~P 247 (450)
++.+++.++++.|++.|+++.++||+....+..+.+.+|+... ......... ... ...+... +.+
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~----------~~~~~~~~~~~ 141 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYA-FANRLIVKD---GKL----------TGDVEGEVLKE 141 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEE-EEEEEEEET---TEE----------EEEEECSSCST
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeE-EEeeeEEEC---CEE----------cCCcccCccCC
Confidence 4668999999999999999999999998888888888887421 000000000 000 0000001 224
Q ss_pred hhHHHHHHHHhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHH
Q 013069 248 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIIT 311 (450)
Q Consensus 248 ~~K~~iV~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~ 311 (450)
..|...+..+.+. ...|+++||+.||++|++.|+++++|+ +.+..+..||+++.++++..+..
T Consensus 142 ~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~-~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 142 NAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC-AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp THHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES-CCHHHHTTCSEEECSSCGGGGGG
T ss_pred ccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC-CCHHHHhhcceeecchhHHHHHH
Confidence 5677766655443 345999999999999999999999998 66777889999998877876654
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=1.1e-09 Score=99.48 Aligned_cols=107 Identities=24% Similarity=0.315 Sum_probs=86.3
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhhHHHHHH
Q 013069 176 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVK 255 (450)
Q Consensus 176 ~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~ 255 (450)
.+|+.|++.|++++++||+....+..+.+.+|+.. +|... ..|..+++
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~------------------------------~~~~~--kpk~~~~~ 107 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITH------------------------------LYQGQ--SNKLIAFS 107 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE------------------------------EECSC--SCSHHHHH
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce------------------------------eecCC--CCCHHHHH
Confidence 38999999999999999999999999999999851 22222 33455555
Q ss_pred HHhhc-C---CEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHH-HHHH
Q 013069 256 HLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVII-TAVL 314 (450)
Q Consensus 256 ~lq~~-g---~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~-~~I~ 314 (450)
.+.+. | ..|+||||+.||++|++.|+++++++++.+.++..||+++.+++..+++ +++.
T Consensus 108 ~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~l~ 171 (188)
T 2r8e_A 108 DLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCD 171 (188)
T ss_dssp HHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred HHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEecCcCHHHHhcCCEEEeCCCCCcHHHHHHH
Confidence 54432 3 5799999999999999999999999988888888999999998777766 5554
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.98 E-value=9.8e-10 Score=108.36 Aligned_cols=131 Identities=15% Similarity=0.160 Sum_probs=95.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccce-eecCh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF-AGVFP 247 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~-a~~~P 247 (450)
++.|++.++++.|++.|+++.++||.....+..+.+.+|+...........+..... .+. ....+
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg~~tg--------------~i~~~~~~~ 244 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTD--------------NITLPIMNA 244 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETTEEEE--------------EECSSCCCH
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCCeeee--------------eEecccCCC
Confidence 589999999999999999999999999999999999999852110000000000000 000 01134
Q ss_pred hhHHHHHHHHhh----cCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 248 EHKYEIVKHLQA----RNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 248 ~~K~~iV~~lq~----~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
..|..+++.+.+ ....|+||||+.||++|++.|++|+++ ++.+..+..+|.++..+++..++.++.
T Consensus 245 kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~-~~~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 245 ANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred CCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 556666655443 345699999999999999999999999 678888999999999999998877653
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.97 E-value=2.3e-09 Score=94.34 Aligned_cols=110 Identities=21% Similarity=0.280 Sum_probs=87.6
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecCh--h
Q 013069 171 IHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP--E 248 (450)
Q Consensus 171 r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P--~ 248 (450)
.+++.++|+.|++.|+++.++||.....+..+.+.+|+.. .|....| +
T Consensus 38 ~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~------------------------------~~~~~kp~~~ 87 (162)
T 2p9j_A 38 NVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE------------------------------IYTGSYKKLE 87 (162)
T ss_dssp EHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE------------------------------EEECC--CHH
T ss_pred cccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh------------------------------hccCCCCCHH
Confidence 4678899999999999999999999999999999999851 1222222 2
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVII 310 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~ 310 (450)
--..+++.+.-....|+|+||+.||.+|.+.|++++++.++.+..+..||+++.+.+..+++
T Consensus 88 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~~~~~~~~~~a~~v~~~~~~~g~~ 149 (162)
T 2p9j_A 88 IYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVAVYITQRNGGEGAL 149 (162)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECSSCSSSSHH
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEecCccHHHHhhCCEEecCCCCCcHH
Confidence 22234444443456799999999999999999999999888888888999999998888877
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.91 E-value=1.1e-09 Score=106.76 Aligned_cols=67 Identities=25% Similarity=0.249 Sum_probs=60.2
Q ss_pred hhHHHHHHHHhhc-C---CEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 248 EHKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 248 ~~K~~iV~~lq~~-g---~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
..|...++.+.+. | ..|+++||+.||.+|++.|++||+|+|+.+.++++||+|+.+++-++|..+|+
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~ 297 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAANYQAKSNDESGVLDVID 297 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcCHHHHHhccEEcCCCCcchHHHHHH
Confidence 4688888877654 2 45999999999999999999999999999999999999999999999998887
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.91 E-value=1.3e-09 Score=103.85 Aligned_cols=68 Identities=24% Similarity=0.249 Sum_probs=59.8
Q ss_pred hhHHHHHHHHhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHH
Q 013069 248 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 315 (450)
Q Consensus 248 ~~K~~iV~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~ 315 (450)
..|...++.+.+. ...|+++||+.||.+|++.|++|++|+++.+.+++.||+|+.+++-++|.++|+.
T Consensus 199 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~edGv~~~l~~ 270 (274)
T 3fzq_A 199 FHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQQLKDIATSICEDIFDNGIYKELKR 270 (274)
T ss_dssp CSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCccHHHHHhhhheeCCCchhHHHHHHHH
Confidence 3588777766553 3569999999999999999999999999999999999999999999999988863
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.91 E-value=8.8e-10 Score=99.11 Aligned_cols=119 Identities=20% Similarity=0.266 Sum_probs=89.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++++++.+.++.|++.|+++.++|+.....+..+ +.+|+..- ........ ... ......|.
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~~~~~~~-------------~~~----~~~~~~~~ 139 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-ANRAIFED-------------GKF----QGIRLRFR 139 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EEEEEEET-------------TEE----EEEECCSS
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-eeeEEeeC-------------Cce----ECCcCCcc
Confidence 6899999999999999999999999988877777 77776311 00000000 000 00345567
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
.|...++.+ ....|+|+||+.||++|++.|+++++|+++.+ .||+++. ++..+..++.
T Consensus 140 ~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~~~~~~----~ad~v~~--~~~el~~~l~ 197 (201)
T 4ap9_A 140 DKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAVGREIP----GADLLVK--DLKELVDFIK 197 (201)
T ss_dssp CHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEESSCCT----TCSEEES--SHHHHHHHHH
T ss_pred CHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEECCCCc----cccEEEc--cHHHHHHHHH
Confidence 899999888 56679999999999999999999999997765 8899985 4666666554
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.88 E-value=4.3e-09 Score=98.49 Aligned_cols=147 Identities=22% Similarity=0.185 Sum_probs=101.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--CCc-ccc-CCc--------hhh---hhh----
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSS-ALS-GQD--------RDE---SIV---- 228 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~--~~~-~l~-~~~--------~~~---~~~---- 228 (450)
..+.+.+.++|+++++.|+.++++||+....+..+.+.+|+....+ +.. +.. +.. ..+ .+.
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~ 98 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFP 98 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCC
Confidence 3467889999999999999999999999999999999999854211 110 110 100 000 000
Q ss_pred cC--------------------C---hhHHhhh----ccc-----eeecCh--hhHHHHHHHHhhc----CCEEEEecCC
Q 013069 229 AL--------------------P---VDELIEK----ADG-----FAGVFP--EHKYEIVKHLQAR----NHICGMIGNG 270 (450)
Q Consensus 229 ~~--------------------~---~~~~~~~----~~v-----~a~~~P--~~K~~iV~~lq~~----g~~v~~iGDG 270 (450)
.. + ...+.+. ..+ +.++.| ..|...++.+.+. ...|+++||+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~ 178 (231)
T 1wr8_A 99 NARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG 178 (231)
T ss_dssp TCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECS
T ss_pred CceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCC
Confidence 00 0 1111111 111 123333 3688888777653 3469999999
Q ss_pred CCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 271 VNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 271 ~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
.||.+|++.|+++++|+++.+..++.||+++.+++-.++.++|+
T Consensus 179 ~nD~~~~~~ag~~v~~~~~~~~~~~~a~~v~~~~~e~Gv~~~l~ 222 (231)
T 1wr8_A 179 ENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIY 222 (231)
T ss_dssp GGGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEecCCCHHHHhhCCEEecCCCcchHHHHHH
Confidence 99999999999999999998888999999999888889988886
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=5.2e-09 Score=94.96 Aligned_cols=136 Identities=15% Similarity=0.184 Sum_probs=88.6
Q ss_pred cccccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCc-hhh-hhcccEEEEeccCCCCceEEE
Q 013069 13 GTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADP-KEA-RADIQEVHFLPFDPTGKRTAL 90 (450)
Q Consensus 13 GTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~-~~~-~~~~~~l~~~pF~~~~kr~sv 90 (450)
||||+|+|.|..+.......+.+.++++.+++.++..+.| |+++||+.++... ... ......++..|- +-+.-
T Consensus 1 GTLT~G~p~V~~v~~~~~~~~~~~~~lL~laaa~E~~SeH-PlA~AIv~~a~~~~~~~~~~~~~~f~~i~G----~Gv~~ 75 (185)
T 2kmv_A 1 SFTMHGTPVVNQVKVLTESNRISHHKILAIVGTAESNSEH-PLGTAITKYCKQELDTETLGTCIDFQVVPG----CGISC 75 (185)
T ss_dssp CCCCSCCCEEEEEEECSCTTTSCHHHHHHHHHHGGGSSSC-HHHHHHHHHHHHHHTCSCCCCCBCCEEETT----TEEEE
T ss_pred CCCcCCcEEEEEEEecCCcCCCCHHHHHHHHHHHHccCCC-HHHHHHHHHHHhhcCCCCCCCccceEEecc----ceEEE
Confidence 8999999999986431111346889999999999999887 9999999987421 100 011112222221 11222
Q ss_pred EEEccCC-----------------------------------------------eEEEEEcCCHHHHHhhhcCChhhHHH
Q 013069 91 TYIDSEG-----------------------------------------------KMHRVTKGSPEQILNLLHNKSKIGRK 123 (450)
Q Consensus 91 i~~~~~g-----------------------------------------------~~~~~~KGa~~~i~~~~~~~~~~~~~ 123 (450)
.+.+.++ +.+.+..|++++|.+... .+++.
T Consensus 76 ~V~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi---~i~~~ 152 (185)
T 2kmv_A 76 KVTNIEGLLHKNNWNIEDNNIKNASLVQIDASNEQSSTSSSMIIDAQISNALNAQQYKVLIGNREWMIRNGL---VINND 152 (185)
T ss_dssp EECCSGGGSSCSSCCCCSCCCCCCCCCCTTTTSCCCCCCCCCCCSTTTTTGGGSCCEEEEEECHHHHHHHTC---CCCHH
T ss_pred EECCccccccccccccccccccccccccccccccccccccccccccccccccCCCceEEEECCHHHHHHcCC---CCCHH
Confidence 2221000 115788999999876321 22334
Q ss_pred HHHHHHHHHHhcchhhhhhceecCCCCcCCCCCCcEEEEeccCCCC
Q 013069 124 VNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDP 169 (450)
Q Consensus 124 ~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~D~ 169 (450)
+...+.++..+|..++.||.++ +++|++.+.|+
T Consensus 153 ~~~~~~~~~~~G~T~V~vaidg-------------~l~g~iavaD~ 185 (185)
T 2kmv_A 153 VNDFMTEHERKGRTAVLVAVDD-------------ELCGLIAIADT 185 (185)
T ss_dssp HHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEEECC
T ss_pred HHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEEEcC
Confidence 5566778888999999999887 99999999985
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.80 E-value=3.8e-08 Score=89.45 Aligned_cols=129 Identities=14% Similarity=0.111 Sum_probs=93.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.+.++.|++. +++.++|+.....+..+.+.+|+.... ...+..+.+.. ...+-.-.|+
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f-~~~~~~~~~~~--------------~~~~~~p~p~ 132 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLL-CHKLEIDDSDR--------------VVGYQLRQKD 132 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEE-EEEEEECTTSC--------------EEEEECCSSS
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCccee-cceeEEcCCce--------------EEeeecCCCc
Confidence 5789999999999999 999999999999999999999986211 00011110000 0000124678
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
.|..+++.+......|+|+||+.||++|.+.|++++++.. .+..+..++.++.-+++..+..++.
T Consensus 133 ~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~ 197 (206)
T 1rku_A 133 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHA-PENVIREFPQFPAVHTYEDLKREFL 197 (206)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEESC-CHHHHHHCTTSCEECSHHHHHHHHH
T ss_pred hHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEECC-cHHHHHHHhhhccccchHHHHHHHH
Confidence 8999999998888899999999999999999999999854 3444444433332466888877664
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.76 E-value=1.4e-08 Score=97.99 Aligned_cols=66 Identities=24% Similarity=0.225 Sum_probs=58.9
Q ss_pred hHHHHHHHHhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 249 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 249 ~K~~iV~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
.|...++.+.+. ...|+++||+.||.+|++.|++|++|+++.+..++.||+++.+++..+|.++|+
T Consensus 198 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~a~~v~~~~~~dGV~~~l~ 267 (282)
T 1rkq_A 198 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIE 267 (282)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCCcHHHHhhCCEEecCCCcchHHHHHH
Confidence 688888887654 245999999999999999999999999999999999999999999999998886
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.72 E-value=3.6e-08 Score=89.36 Aligned_cols=130 Identities=10% Similarity=0.081 Sum_probs=88.5
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCC-CCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTN-MYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+... .+........+.. . . .......+|.
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---------~-~~~~~~~~~~ 150 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGS--F---------K-ELDNSNGACD 150 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSB--E---------E-EEECTTSTTT
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCc--e---------e-ccCCCCCCcc
Confidence 689999999999999999999999999999999999998521 1111011000000 0 0 0011233456
Q ss_pred hHHHHHHHH-hhcCCEEEEecCCCCChHhHhh----CCeeEEeccchHHHhhccCEEecCCCchHHHHHH
Q 013069 249 HKYEIVKHL-QARNHICGMIGNGVNDAPALKK----ADIGIAVADATDAARSAADIVLTEPGLNVIITAV 313 (450)
Q Consensus 249 ~K~~iV~~l-q~~g~~v~~iGDG~ND~~al~~----AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I 313 (450)
.|...+..+ .-....|+|+||+.||.+|++. +.++++++++.+..+..||+++. ++..+..++
T Consensus 151 ~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~~~~~~~~~~ad~v~~--~~~el~~~l 218 (219)
T 3kd3_A 151 SKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEHIEREKVINLSKYVAR--NVAELASLI 218 (219)
T ss_dssp CHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECSSCCCHHHHHHCSEEES--SHHHHHHHH
T ss_pred cHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccCccccHHHHhhcceeeC--CHHHHHHhh
Confidence 677766554 5567889999999999999976 34444445677888889999985 466665543
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=1.7e-08 Score=91.80 Aligned_cols=128 Identities=13% Similarity=0.113 Sum_probs=92.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+..-.....++... .....-.|+
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~------------------~~~~kp~~~ 131 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRD------------------EAPPKPHPG 131 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTT------------------TSCCTTSSH
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCC------------------CCCCCCCHH
Confidence 35789999999999999999999999999999999999984211000111100 001111222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCe-eEEeccchHHHhhccCEEecCCCchHHHHHHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVADATDAARSAADIVLTEPGLNVIITAVLIS 316 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~Adv-GIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~ 316 (450)
--..+++.+.-....|+||||+.||+.|.+.|++ +|+|+++.+..+..||+++. ++..+...+...
T Consensus 132 ~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~ad~v~~--~~~el~~~~~~~ 198 (205)
T 3m9l_A 132 GLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWPELTDWHAR--DCAQLRDLLSAE 198 (205)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECSSSSCSCGGGCSEECS--SHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCCcccccCCEEeC--CHHHHHHHHHhc
Confidence 2234455554445679999999999999999999 99999887777888999985 588887777643
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.71 E-value=6.2e-09 Score=98.13 Aligned_cols=139 Identities=12% Similarity=0.085 Sum_probs=92.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccc--cCCc-------hhhhh------------
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL--SGQD-------RDESI------------ 227 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l--~~~~-------~~~~~------------ 227 (450)
.+.+.+.++|++|++.| .|+++||+....+..+...+ +.--..++..+ .+.. ....+
T Consensus 23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l-~~~I~~nGa~i~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~ 100 (239)
T 1u02_A 23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLD-INMICYHGACSKINGQIVYNNGSDRFLGVFDRIYEDTRSWV 100 (239)
T ss_dssp CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSS-CEEEEGGGTEEEETTEEEECTTGGGGHHHHHHHHHHHTTHH
T ss_pred CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccc-hheEEECCEEEeeCCeeeecccccccchhhHHHHHHHHHHH
Confidence 46788999999999999 99999999999888876654 21000011100 0000 00000
Q ss_pred -------------------hcCC------hhHH---hhh---cc-----ceeecChh--hHHHHHHHHhhcCCEEEEecC
Q 013069 228 -------------------VALP------VDEL---IEK---AD-----GFAGVFPE--HKYEIVKHLQARNHICGMIGN 269 (450)
Q Consensus 228 -------------------~~~~------~~~~---~~~---~~-----v~a~~~P~--~K~~iV~~lq~~g~~v~~iGD 269 (450)
...+ ...+ +.. .. .+.++.|. +|...++.|.+... |+++||
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lei~~~~~~Kg~al~~l~~~~g-via~GD 179 (239)
T 1u02_A 101 SDFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARIFGVETYYGKMIIELRVPGVNKGSAIRSVRGERP-AIIAGD 179 (239)
T ss_dssp HHSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHHHHHTCEEEECSSEEEEECTTCCHHHHHHHHHTTSC-EEEEES
T ss_pred hhCCCcEEEecCCEEEEEcCCCChhHHHHHHHHHHHHhccCCcEEEeCCcEEEEEcCCCCHHHHHHHHHhhCC-eEEEeC
Confidence 0000 0000 111 11 12334444 79999999987644 999999
Q ss_pred CCCChHhHhhC--CeeEEeccchHHHhhccCEEecC-CCchHHHHHHH
Q 013069 270 GVNDAPALKKA--DIGIAVADATDAARSAADIVLTE-PGLNVIITAVL 314 (450)
Q Consensus 270 G~ND~~al~~A--dvGIa~~~~~~~a~~aaDivl~~-~~l~~i~~~I~ 314 (450)
+.||.+||+.| ++||+|+|+ ++.||+++.+ ++-.+|.++|+
T Consensus 180 ~~ND~~Ml~~a~~g~~vam~Na----~~~A~~v~~~~~~~~gV~~~l~ 223 (239)
T 1u02_A 180 DATDEAAFEANDDALTIKVGEG----ETHAKFHVADYIEMRKILKFIE 223 (239)
T ss_dssp SHHHHHHHHTTTTSEEEEESSS----CCCCSEEESSHHHHHHHHHHHH
T ss_pred CCccHHHHHHhhCCcEEEECCC----CCcceEEeCCCCCHHHHHHHHH
Confidence 99999999999 999999997 6789999987 77888888876
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.65 E-value=2.8e-08 Score=94.53 Aligned_cols=74 Identities=28% Similarity=0.289 Sum_probs=63.3
Q ss_pred eeecCh--hhHHHHHHHHhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHH
Q 013069 242 FAGVFP--EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 315 (450)
Q Consensus 242 ~a~~~P--~~K~~iV~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~ 315 (450)
+.++.| ..|...++.+.+. ...|+++||+.||.+|++.|++|++|+|+.+.++++||+|+.+++-++|..+|+.
T Consensus 185 ~~ei~~~~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~ 264 (268)
T 3r4c_A 185 FADVNVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVTDTVDNSGLYKALKH 264 (268)
T ss_dssp EEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTCSEECCCTTTTHHHHHHHH
T ss_pred eEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHHHHHhcCEeeCCCCcCHHHHHHHH
Confidence 334444 4688888877654 2459999999999999999999999999999999999999999999999998863
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.65 E-value=4.5e-08 Score=90.53 Aligned_cols=127 Identities=21% Similarity=0.275 Sum_probs=90.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+... ....-.|+
T Consensus 104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 164 (237)
T 4ex6_A 104 LLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRL--TVIAGDDSV-----------------ERGKPHPD 164 (237)
T ss_dssp GBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTC--SEEECTTTS-----------------SSCTTSSH
T ss_pred ccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhhe--eeEEeCCCC-----------------CCCCCCHH
Confidence 36789999999999999999999999999999999999874211 011111000 01111233
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCe---eEEecc-chHHHhh-ccCEEecCCCchHHHHHHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADI---GIAVAD-ATDAARS-AADIVLTEPGLNVIITAVLIS 316 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~Adv---GIa~~~-~~~~a~~-aaDivl~~~~l~~i~~~I~~~ 316 (450)
--..+++.+.-....|+||||+.||+.|++.|++ +|++++ ..+..+. .+|+++. ++..+..++..+
T Consensus 165 ~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--~~~el~~~l~~~ 235 (237)
T 4ex6_A 165 MALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVD--SFPAAVTAVLDG 235 (237)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEES--SHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEEC--CHHHHHHHHHcc
Confidence 3345555665556679999999999999999999 888874 3345554 7999984 588888887754
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=3.8e-08 Score=93.52 Aligned_cols=64 Identities=22% Similarity=0.293 Sum_probs=55.7
Q ss_pred hhHHHHHHHHhhc-C-----CEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 248 EHKYEIVKHLQAR-N-----HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 248 ~~K~~iV~~lq~~-g-----~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
.+|...++.+.+. | ..|+++||+.||.+|++.|++|++|+|+.+ . .++++..+++-.++.+++.
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~--~~~~~~~~~~~~gv~~~~~ 244 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP-P--EGVLATPAPGPEGFRYAVE 244 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC-C--TTCEECSSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh-c--CCcEEeCCCCchHHHHHHH
Confidence 5788888887664 3 669999999999999999999999999888 4 7889999888899888876
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.57 E-value=2.6e-07 Score=85.35 Aligned_cols=107 Identities=18% Similarity=0.175 Sum_probs=74.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccce-eecCh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF-AGVFP 247 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~-a~~~P 247 (450)
++.|++.+.|+.|++.|+++.++||.....+..+++.+|+.. .+.......... . ..... ..+.+
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~---~----------~g~~~~~~~~~ 157 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQH-LIATDPEYRDGR---Y----------TGRIEGTPSFR 157 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCE-EEECEEEEETTE---E----------EEEEESSCSST
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE-EEEcceEEECCE---E----------eeeecCCCCcc
Confidence 379999999999999999999999999999999999999852 110000000000 0 00000 11234
Q ss_pred hhHHHHHHHHhh-cC------CEEEEecCCCCChHhHhhCCeeEEeccc
Q 013069 248 EHKYEIVKHLQA-RN------HICGMIGNGVNDAPALKKADIGIAVADA 289 (450)
Q Consensus 248 ~~K~~iV~~lq~-~g------~~v~~iGDG~ND~~al~~AdvGIa~~~~ 289 (450)
..|...++.+.+ .| ..|+++||+.||++|++.|++++++...
T Consensus 158 ~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~~~ 206 (232)
T 3fvv_A 158 EGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPS 206 (232)
T ss_dssp HHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEESCC
T ss_pred hHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEECcC
Confidence 567766655433 23 6799999999999999999999999643
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.56 E-value=7.7e-08 Score=87.57 Aligned_cols=123 Identities=4% Similarity=-0.047 Sum_probs=83.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.+.++.|++.|+++.++|+. ..+..+.+.+|+.... ..++.+... ....-.|+
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~~ 149 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYF--DAIADPAEV-----------------AASKPAPD 149 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGC--SEECCTTTS-----------------SSCTTSSH
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHc--ceEeccccC-----------------CCCCCChH
Confidence 35789999999999999999999998 3455666777764210 001110000 00111222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAV 313 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I 313 (450)
--..+++.+.-....|+++||+.||++|++.|+++++|.++.+..+ .||+++.+.+-.++..++
T Consensus 150 ~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~-~a~~v~~~~~el~~~~~~ 213 (221)
T 2wf7_A 150 IFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLG-DDIVIVPDTSHYTLEFLK 213 (221)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHHHHC-SSSEEESSGGGCCHHHHH
T ss_pred HHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEECCHHHhc-cccchhcCHHhCCHHHHH
Confidence 2334555555455679999999999999999999999998877777 899998766555555444
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.56 E-value=1.8e-07 Score=86.18 Aligned_cols=124 Identities=11% Similarity=0.062 Sum_probs=80.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhh
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 249 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 249 (450)
+.+++.+.++.|++.|+++.++|+... +..+.+.+|+.... ..++.+.+. ....-.|+-
T Consensus 93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f--~~i~~~~~~-----------------~~~Kp~~~~ 151 (233)
T 3nas_A 93 LLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDF--HAIVDPTTL-----------------AKGKPDPDI 151 (233)
T ss_dssp SCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTC--SEECCC--------------------------CCH
T ss_pred cCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhc--CEEeeHhhC-----------------CCCCCChHH
Confidence 688999999999999999999999755 67778888875211 011111000 001112222
Q ss_pred HHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHH
Q 013069 250 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 315 (450)
Q Consensus 250 K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~ 315 (450)
-..+++.+.-....|+||||+.||+.|.+.|++++++.++.+..+ .||+++.+.+-..+..++++
T Consensus 152 ~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~~~~-~ad~v~~s~~el~~~~~~~~ 216 (233)
T 3nas_A 152 FLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQGQPML-GADLVVRQTSDLTLELLHEE 216 (233)
T ss_dssp HHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEECC--------CSEECSSGGGCCHHHHHHH
T ss_pred HHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEECCccccc-cCCEEeCChHhCCHHHHHHH
Confidence 245566665556779999999999999999999999987766666 89999976555555555543
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.54 E-value=1e-07 Score=87.34 Aligned_cols=120 Identities=11% Similarity=0.140 Sum_probs=86.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecC--
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF-- 246 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~-- 246 (450)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..+ +.+...
T Consensus 86 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~-----------------------~~~~~~~~ 140 (226)
T 3mc1_A 86 KVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYF--DAI-----------------------VGSSLDGK 140 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGC--SEE-----------------------EEECTTSS
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhhe--eee-----------------------eccCCCCC
Confidence 47899999999999999999999999999999999999875211 000 011111
Q ss_pred hhhHHHH----HHHHhhcCCEEEEecCCCCChHhHhhCCe---eEEeccchHHH--hhccCEEecCCCchHHHHHHHH
Q 013069 247 PEHKYEI----VKHLQARNHICGMIGNGVNDAPALKKADI---GIAVADATDAA--RSAADIVLTEPGLNVIITAVLI 315 (450)
Q Consensus 247 P~~K~~i----V~~lq~~g~~v~~iGDG~ND~~al~~Adv---GIa~~~~~~~a--~~aaDivl~~~~l~~i~~~I~~ 315 (450)
...|..+ ++.+.-....|++|||+.||+.|.+.|++ +|+++++.... +..+|+++. ++..+..++..
T Consensus 141 ~kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--s~~el~~~~~~ 216 (226)
T 3mc1_A 141 LSTKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVN--SVDELHKKILE 216 (226)
T ss_dssp SCSHHHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEES--SHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEEC--CHHHHHHHHHH
Confidence 1223343 44444344579999999999999999999 77777544333 578999985 58888777764
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.52 E-value=1.5e-07 Score=86.60 Aligned_cols=125 Identities=19% Similarity=0.256 Sum_probs=85.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC-CCCCCcc-------ccCCchhhhhhcCChhHHhhhcc
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT-NMYPSSA-------LSGQDRDESIVALPVDELIEKAD 240 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~-~~~~~~~-------l~~~~~~~~~~~~~~~~~~~~~~ 240 (450)
++.|++.++++.|++.|++++++|+.....+..+.+.+|+.. +.+...+ +.+.+ .
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~-----------------~ 148 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFD-----------------E 148 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEEC-----------------T
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCC-----------------C
Confidence 578999999999999999999999999999999999999852 1110000 00000 0
Q ss_pred ceeecChhhHHHHHHHHhhc-C-CEEEEecCCCCChHhHhhCCeeEEeccc--hHHHhhccCEEecCCCchHHHHH
Q 013069 241 GFAGVFPEHKYEIVKHLQAR-N-HICGMIGNGVNDAPALKKADIGIAVADA--TDAARSAADIVLTEPGLNVIITA 312 (450)
Q Consensus 241 v~a~~~P~~K~~iV~~lq~~-g-~~v~~iGDG~ND~~al~~AdvGIa~~~~--~~~a~~aaDivl~~~~l~~i~~~ 312 (450)
....+.+..|..+++.+.+. | ..|+||||+.||+.|.+.|+++|+++.. .+.....+|+++.+ +..+..+
T Consensus 149 ~~~~~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~~--~~el~~~ 222 (225)
T 1nnl_A 149 TQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD--FVELLGE 222 (225)
T ss_dssp TSGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESC--GGGGCC-
T ss_pred CCcccCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeecC--HHHHHHH
Confidence 00011234677776665443 3 5799999999999999999998888742 33445568988854 5555443
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.52 E-value=9.6e-08 Score=92.05 Aligned_cols=131 Identities=15% Similarity=0.171 Sum_probs=90.7
Q ss_pred CCCcchHHHHHHHHhC-CCeEEEEcCC---------------------cHHHHHHHHHHhCCCCCCCCCccccCCchhhh
Q 013069 169 PPIHDSAETIRRALSL-GLGVKMITGD---------------------QLAIAKETGRRLGMGTNMYPSSALSGQDRDES 226 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~-Gi~v~mlTGD---------------------~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~ 226 (450)
.+++++.+.++.+++. |+++.+.|.. ....+..+.+..|+...........+..
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~---- 197 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDP---- 197 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCC----
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCC----
Confidence 3578899999999987 9998888876 3344445555555521100000000000
Q ss_pred hhcCChhHHhhhccceeecCh--hhHHHHHHHHhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEE
Q 013069 227 IVALPVDELIEKADGFAGVFP--EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 300 (450)
Q Consensus 227 ~~~~~~~~~~~~~~v~a~~~P--~~K~~iV~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDiv 300 (450)
....+..+.| ..|...++.+.+. ...|+++||+.||.+|++.|++|++|+++.+..+..||++
T Consensus 198 -----------~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~~~~~~a~~v 266 (289)
T 3gyg_A 198 -----------EDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQEAKNLHNLI 266 (289)
T ss_dssp -----------TTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCHHHHHHCCCB
T ss_pred -----------CCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccHHHHHhCCEE
Confidence 0012333333 3577777666543 3459999999999999999999999999999999999999
Q ss_pred ecCCCchHHHHHHH
Q 013069 301 LTEPGLNVIITAVL 314 (450)
Q Consensus 301 l~~~~l~~i~~~I~ 314 (450)
+.+++-.++.++|.
T Consensus 267 ~~~~~~~gv~~~~~ 280 (289)
T 3gyg_A 267 TDSEYSKGITNTLK 280 (289)
T ss_dssp CSSCHHHHHHHHHH
T ss_pred cCCCCcCHHHHHHH
Confidence 99998889988886
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.50 E-value=2.1e-07 Score=84.76 Aligned_cols=120 Identities=16% Similarity=0.192 Sum_probs=82.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhh
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 249 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 249 (450)
+.+++.+.++.+++.|++++++|+........+.+.+|+.... ..++..... ....-.|+-
T Consensus 95 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~-----------------~~~kp~~~~ 155 (226)
T 1te2_A 95 LLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSF--DALASAEKL-----------------PYSKPHPQV 155 (226)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEECTTS-----------------SCCTTSTHH
T ss_pred cCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhC--cEEEecccc-----------------CCCCCChHH
Confidence 5789999999999999999999999988888888888874210 001100000 000111223
Q ss_pred HHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEe----ccchHHHhhccCEEecCCCchHHH
Q 013069 250 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV----ADATDAARSAADIVLTEPGLNVII 310 (450)
Q Consensus 250 K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~----~~~~~~a~~aaDivl~~~~l~~i~ 310 (450)
-..+++.+.-....|+++||+.||++|++.|++++++ +++.+..+..||+++.+ +..+.
T Consensus 156 ~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~--~~el~ 218 (226)
T 1te2_A 156 YLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSS--LTELT 218 (226)
T ss_dssp HHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSC--GGGCC
T ss_pred HHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECC--HHHHh
Confidence 3445555554556799999999999999999999998 55555667889998854 44443
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.49 E-value=1.9e-07 Score=89.74 Aligned_cols=66 Identities=20% Similarity=0.144 Sum_probs=34.8
Q ss_pred hHHHHHHHHhhc-----CCE--EEEecCCCCChHhHhhCCeeEEeccch---HHHhhc--cC-EEecCCCchHHHHHHH
Q 013069 249 HKYEIVKHLQAR-----NHI--CGMIGNGVNDAPALKKADIGIAVADAT---DAARSA--AD-IVLTEPGLNVIITAVL 314 (450)
Q Consensus 249 ~K~~iV~~lq~~-----g~~--v~~iGDG~ND~~al~~AdvGIa~~~~~---~~a~~a--aD-ivl~~~~l~~i~~~I~ 314 (450)
.|...++.+.+. ... |+++||+.||.+|++.|++||+|+++. +..++. || +++.+++-++|.++|+
T Consensus 189 ~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~l~ 267 (275)
T 1xvi_A 189 GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVKGLNREGVHLHDEDPARVWRTQREGPEGWREGLD 267 (275)
T ss_dssp CHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECCCCC------------------------------
T ss_pred CHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEecCCCccchhhccccCCceeEccCCCchHHHHHHH
Confidence 577777666533 235 999999999999999999999999887 566543 78 8888888899988876
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.45 E-value=4.1e-07 Score=85.83 Aligned_cols=127 Identities=13% Similarity=0.157 Sum_probs=85.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+..... ..++.+... ....-.|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~-----------------~~~kp~~~ 164 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKP-DFLVTPDDV-----------------PAGRPYPW 164 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCC-SCCBCGGGS-----------------SCCTTSSH
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccCh-HheecCCcc-----------------CCCCCCHH
Confidence 367899999999999999999999999888888888777642110 111111000 00111233
Q ss_pred hHHHHHHHHhhcC-CEEEEecCCCCChHhHhhCC---eeEEeccc------------------------hHHHhhc-cCE
Q 013069 249 HKYEIVKHLQARN-HICGMIGNGVNDAPALKKAD---IGIAVADA------------------------TDAARSA-ADI 299 (450)
Q Consensus 249 ~K~~iV~~lq~~g-~~v~~iGDG~ND~~al~~Ad---vGIa~~~~------------------------~~~a~~a-aDi 299 (450)
--..+++.+.-.. ..|++|||+.||+.|++.|+ ++++++++ .+..+.. ||+
T Consensus 165 ~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 244 (267)
T 1swv_A 165 MCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHF 244 (267)
T ss_dssp HHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCce
Confidence 3345566665555 67999999999999999999 55666654 2334444 899
Q ss_pred EecCCCchHHHHHHHH
Q 013069 300 VLTEPGLNVIITAVLI 315 (450)
Q Consensus 300 vl~~~~l~~i~~~I~~ 315 (450)
++. ++..+..++..
T Consensus 245 v~~--~~~el~~~l~~ 258 (267)
T 1swv_A 245 TIE--TMQELESVMEH 258 (267)
T ss_dssp EES--SGGGHHHHHHH
T ss_pred ecc--CHHHHHHHHHH
Confidence 984 57777776653
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.41 E-value=3.3e-07 Score=84.05 Aligned_cols=126 Identities=15% Similarity=0.117 Sum_probs=85.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+... ....-.|+
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 151 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINK--INIVTRDDV-----------------SYGKPDPD 151 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTS--SCEECGGGS-----------------SCCTTSTH
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhh--heeeccccC-----------------CCCCCChH
Confidence 35789999999999999999999999999999999988885321 011110000 00111122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCe---eEEec-cchHHHhhc-cCEEecCCCchHHHHHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADI---GIAVA-DATDAARSA-ADIVLTEPGLNVIITAVLI 315 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~Adv---GIa~~-~~~~~a~~a-aDivl~~~~l~~i~~~I~~ 315 (450)
--..+++.+.-....|++|||+.||+.|.+.|++ +|+++ +..+..+.. +|+++. ++..+..++..
T Consensus 152 ~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~--~~~el~~~l~~ 221 (233)
T 3s6j_A 152 LFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYE--DPLDLLNHLDE 221 (233)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEES--SHHHHHHTGGG
T ss_pred HHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEEC--CHHHHHHHHHH
Confidence 2234444444445669999999999999999999 44445 445555554 899884 58877777653
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=98.38 E-value=8.6e-07 Score=78.83 Aligned_cols=133 Identities=13% Similarity=0.084 Sum_probs=84.8
Q ss_pred cccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhh--hhcccEEEEeccCCCCceEEEEE
Q 013069 15 LTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEA--RADIQEVHFLPFDPTGKRTALTY 92 (450)
Q Consensus 15 LT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~--~~~~~~l~~~pF~~~~kr~svi~ 92 (450)
||+|+|.|.++.......+.+.++++.+++.++..++| |+++||+.++...... ......++.+| -.. +.-.+
T Consensus 1 LT~G~p~V~~v~~~~~~~~~~~~~lL~laaslE~~SeH-PlA~AIv~~a~~~~~~~~~~~~~~f~~i~---G~G-v~a~v 75 (165)
T 2arf_A 1 AGHMVPRVMRVLLLGDVATLPLRKVLAVVGTAEASSEH-PLGVAVTKYCKEELGTETLGYCTDFQAVP---GCG-IGCKV 75 (165)
T ss_dssp CCCCCCCEEEEEECCCTTTSCHHHHHHHHHHHHTTSCS-TTHHHHHHHHHHHHTCCCCCCEEEEEEET---TTE-EEEEE
T ss_pred CCCceeEEEEEEeeCCcCCCCHHHHHHHHHHHHccCCC-hHHHHHHHHHHHhcCCCCCCCcCceEEec---Ccc-EEEEE
Confidence 89999999985431100135788999999999999887 9999999987422000 01122233333 222 22222
Q ss_pred Ecc------------------------------CCeEEEEEcCCHHHHHhhhcCChhhHHHHHHHHHHHHHhcchhhhhh
Q 013069 93 IDS------------------------------EGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVA 142 (450)
Q Consensus 93 ~~~------------------------------~g~~~~~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA 142 (450)
.+. ..+.+.+..|++.+|.+... .++..+...+..+..+|..++.||
T Consensus 76 ~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi---~~~~~~~~~~~~~~~~G~T~v~va 152 (165)
T 2arf_A 76 SNVEGILAHSERPLSAPASHLNEAGSLPAEKDAVPQTFSVLIGNREWLRRNGL---TISSDVSDAMTDHEMKGQTAILVA 152 (165)
T ss_dssp ECHHHHHSCCCCCCCCCCCCSSSSCCCCCCCCCCCCEEEEEEECHHHHHHHHC---SSCHHHHHHHHHHHTTTSEEEEEE
T ss_pred cCcccccccccccccccccccccccccccccccCCCceEEEEcCHHHHHhcCC---CCCHHHHHHHHHHHhCCCeEEEEE
Confidence 211 11235778899999866321 122334455667788999999999
Q ss_pred ceecCCCCcCCCCCCcEEEEeccCCC
Q 013069 143 YQEVPEGSKESSGSPWQFIGLIPLFD 168 (450)
Q Consensus 143 ~~~~~~~~~~~~e~~~~~lG~i~l~D 168 (450)
.+. +++|++++.|
T Consensus 153 ~dg-------------~~~g~i~l~D 165 (165)
T 2arf_A 153 IDG-------------VLCGMIAIAD 165 (165)
T ss_dssp ETT-------------EEEEEEEECC
T ss_pred ECC-------------EEEEEEEEEC
Confidence 887 8999999987
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.38 E-value=3e-07 Score=83.54 Aligned_cols=123 Identities=15% Similarity=0.118 Sum_probs=79.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhh
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 249 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 249 (450)
+.+++.+.++.+++.|+++.++|+..........+.+|+.... ..++..... ....-.|.-
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-----------------~~~k~~~~~ 150 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWF--DIIIGGEDV-----------------THHKPDPEG 150 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCC--SEEECGGGC-----------------SSCTTSTHH
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhhe--eeeeehhhc-----------------CCCCCChHH
Confidence 4689999999999999999999999988888888888774211 001100000 000011122
Q ss_pred HHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEe----ccchHHHhhc-cCEEecCCCchHHHHHH
Q 013069 250 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV----ADATDAARSA-ADIVLTEPGLNVIITAV 313 (450)
Q Consensus 250 K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~----~~~~~~a~~a-aDivl~~~~l~~i~~~I 313 (450)
-..+++.+.-....|+++||+.||++|++.|++++++ .++.+..+.. ||+++.+ +..+...|
T Consensus 151 ~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~~--~~el~~~l 217 (225)
T 3d6j_A 151 LLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIIST--LGQLISVP 217 (225)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEESS--GGGGC---
T ss_pred HHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEECC--HHHHHHhh
Confidence 2344444444455699999999999999999999887 3444555554 8998854 55555444
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.37 E-value=3.6e-07 Score=86.39 Aligned_cols=56 Identities=20% Similarity=0.163 Sum_probs=47.0
Q ss_pred hhHHHHHHHHhhc-----CCEEEEecCCCCChHhHhhCCeeEEeccch-HHHhhccCEEecC
Q 013069 248 EHKYEIVKHLQAR-----NHICGMIGNGVNDAPALKKADIGIAVADAT-DAARSAADIVLTE 303 (450)
Q Consensus 248 ~~K~~iV~~lq~~-----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~-~~a~~aaDivl~~ 303 (450)
.+|...++.+.+. ...|+++||+.||.+||+.|++||+|+++. +..++.||+|+.+
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEecc
Confidence 3598888777653 357999999999999999999999999987 6788888887754
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.36 E-value=3.2e-07 Score=82.01 Aligned_cols=118 Identities=16% Similarity=0.120 Sum_probs=80.3
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhh
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 249 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 249 (450)
+.+++.+.++.|++.|++++++|+....... ..+.+|+.... ..++...+. ....-.|+-
T Consensus 86 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f--~~~~~~~~~-----------------~~~Kp~~~~ 145 (207)
T 2go7_A 86 LMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYF--TEILTSQSG-----------------FVRKPSPEA 145 (207)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGE--EEEECGGGC-----------------CCCTTSSHH
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhe--eeEEecCcC-----------------CCCCCCcHH
Confidence 6799999999999999999999999988777 77778774210 000000000 000111222
Q ss_pred HHHHHHHHhhcCCEEEEecCCCCChHhHhhCCee-EEeccchHHHhhccCEEecCCCchHHHHHH
Q 013069 250 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADATDAARSAADIVLTEPGLNVIITAV 313 (450)
Q Consensus 250 K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvG-Ia~~~~~~~a~~aaDivl~~~~l~~i~~~I 313 (450)
-..+++.+.-....|+++||+.||++|++.|+++ |+|+++. . .+|+++. ++..+..++
T Consensus 146 ~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~---~a~~v~~--~~~el~~~l 204 (207)
T 2go7_A 146 ATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST-Y---EGNHRIQ--ALADISRIF 204 (207)
T ss_dssp HHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS-C---TTEEECS--STTHHHHHT
T ss_pred HHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEecCC-C---CCCEEeC--CHHHHHHHH
Confidence 3455555555556799999999999999999998 8888765 3 6888874 466665543
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.36 E-value=4.5e-07 Score=83.37 Aligned_cols=126 Identities=10% Similarity=0.059 Sum_probs=89.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.++++.|++.|+++.++|+.....+..+.+.+|+.... ..++..... ....-.|+
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 159 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLF--DHVLSVDAV-----------------RLYKTAPA 159 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTC--SEEEEGGGT-----------------TCCTTSHH
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhc--CEEEEeccc-----------------CCCCcCHH
Confidence 46789999999999999999999999999888888888875321 001100000 01111222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEe----ccchHHHhhccCEEecCCCchHHHHHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV----ADATDAARSAADIVLTEPGLNVIITAVLI 315 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~----~~~~~~a~~aaDivl~~~~l~~i~~~I~~ 315 (450)
--..+++.+.-....|+||||+.||+.|.+.|++++++ +++.+..+..+|+++. ++..+..++..
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~--~~~el~~~l~~ 228 (233)
T 3umb_A 160 AYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGH--DMRDLLQFVQA 228 (233)
T ss_dssp HHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEES--SHHHHHHHHHC
T ss_pred HHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEEC--CHHHHHHHHHH
Confidence 23345555554556799999999999999999999999 5555556677999985 58888877763
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.33 E-value=1.6e-06 Score=79.40 Aligned_cols=124 Identities=10% Similarity=0.058 Sum_probs=81.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCc---HHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecC
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQ---LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 246 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~---~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 246 (450)
+.+++.+.++.|++.|+++.++|+.. ........+.+|+.... ..++... +. ....-.
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f--~~~~~~~------------~~-----~~~kp~ 160 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFI--DKTFFAD------------EV-----LSYKPR 160 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGC--SEEEEHH------------HH-----TCCTTC
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHh--hhheecc------------cc-----CCCCCC
Confidence 47899999999999999999999998 88888888888874211 0000000 00 001111
Q ss_pred hhhHHHHHHHHhhcCCEEEEecCCC-CChHhHhhCCeeEEe---ccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 247 PEHKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIGIAV---ADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 247 P~~K~~iV~~lq~~g~~v~~iGDG~-ND~~al~~AdvGIa~---~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
|+--..+++.+.-....|++|||+. ||+.|.+.|++++++ +++.+..+..+|+++. ++..+..++.
T Consensus 161 ~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l~ 230 (235)
T 2om6_A 161 KEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIP--SIANLKDVIE 230 (235)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEES--SGGGHHHHHH
T ss_pred HHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHh--hHHHHHHHHH
Confidence 2222334444444456799999999 999999999999998 3333333445787774 5777766654
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.33 E-value=5.1e-07 Score=82.69 Aligned_cols=124 Identities=12% Similarity=0.141 Sum_probs=85.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.... .....-.|+
T Consensus 96 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~-----------------~~~~kp~~~ 156 (230)
T 3um9_A 96 TPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSF--DHLISVDE-----------------VRLFKPHQK 156 (230)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGC--SEEEEGGG-----------------TTCCTTCHH
T ss_pred CCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhc--ceeEehhh-----------------cccCCCChH
Confidence 57899999999999999999999999999888888899874211 00000000 000111222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEe----ccchHHHhhccCEEecCCCchHHHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV----ADATDAARSAADIVLTEPGLNVIITAV 313 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~----~~~~~~a~~aaDivl~~~~l~~i~~~I 313 (450)
--..+++.+.-....|++|||+.||+.|.+.|++++++ +++.+..+..+|+++.+ +..+..++
T Consensus 157 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~el~~~l 223 (230)
T 3um9_A 157 VYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSD--VGVLASRF 223 (230)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESS--HHHHHHTC
T ss_pred HHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCC--HHHHHHHH
Confidence 22344555554456799999999999999999999998 34445556688998854 66665544
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.32 E-value=2.5e-06 Score=78.27 Aligned_cols=124 Identities=18% Similarity=0.165 Sum_probs=86.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.+.++.|++. +++.++|+.....+....+.+|+.... ..++.+. .. ....-.|+
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f--~~~~~~~------------~~-----~~~kp~~~ 159 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLF--DSITTSE------------EA-----GFFKPHPR 159 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEHH------------HH-----TBCTTSHH
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHc--ceeEecc------------cc-----CCCCcCHH
Confidence 4678999999999999 999999999999888888888874210 0000000 00 01111222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCC-CChHhHhhCC---eeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGV-NDAPALKKAD---IGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~-ND~~al~~Ad---vGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
--..+++.+.-....|++|||+. ||+.|.+.|+ ++++++++.+..+..+|+++. ++..+..++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~~--~~~el~~~l~ 227 (234)
T 3u26_A 160 IFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVS--DLREVIKIVD 227 (234)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEES--STHHHHHHHH
T ss_pred HHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEeeC--CHHHHHHHHH
Confidence 23345555554556799999997 9999999999 566667777777778999985 4777776665
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.32 E-value=5.5e-07 Score=83.48 Aligned_cols=118 Identities=13% Similarity=0.100 Sum_probs=82.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecC--
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF-- 246 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~-- 246 (450)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..+ +.+...
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~-----------------------~~~~~~~~ 164 (240)
T 3sd7_A 110 KIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYF--KYI-----------------------AGSNLDGT 164 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGC--SEE-----------------------EEECTTSC
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhE--EEE-----------------------EeccccCC
Confidence 46899999999999999999999999999999999999885211 000 011111
Q ss_pred hhhHH----HHHHHHhhc-CCEEEEecCCCCChHhHhhCCe---eEEeccchHH--HhhccCEEecCCCchHHHHHH
Q 013069 247 PEHKY----EIVKHLQAR-NHICGMIGNGVNDAPALKKADI---GIAVADATDA--ARSAADIVLTEPGLNVIITAV 313 (450)
Q Consensus 247 P~~K~----~iV~~lq~~-g~~v~~iGDG~ND~~al~~Adv---GIa~~~~~~~--a~~aaDivl~~~~l~~i~~~I 313 (450)
+..|. .+++.+.-. ...|++|||+.||+.|.+.|++ +++++++... .+..+|+++.+ +..+..+|
T Consensus 165 ~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~--~~el~~~l 239 (240)
T 3sd7_A 165 RVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVEN--VESIKDIL 239 (240)
T ss_dssp CCCHHHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESS--STTHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECC--HHHHHHHh
Confidence 11233 344444445 5679999999999999999999 5555544333 34789999854 66666554
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.31 E-value=6e-07 Score=84.07 Aligned_cols=122 Identities=16% Similarity=0.169 Sum_probs=83.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.++++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+... ....-.|+
T Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f--~~~~~~~~~-----------------~~~Kp~~~ 174 (243)
T 2hsz_A 114 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLF--SEMLGGQSL-----------------PEIKPHPA 174 (243)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC--SEEECTTTS-----------------SSCTTSSH
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheE--EEEEecccC-----------------CCCCcCHH
Confidence 47789999999999999999999999999999999999974211 011111000 00111233
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEE-ecc----chHHHhhccCEEecCCCchHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-VAD----ATDAARSAADIVLTEPGLNVIIT 311 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa-~~~----~~~~a~~aaDivl~~~~l~~i~~ 311 (450)
--..+++.+.-....|+||||+.||++|.+.|++++. +.. +.+.....+|+++.+ +..+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~--~~el~~ 240 (243)
T 2hsz_A 175 PFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDD--FADILK 240 (243)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESS--GGGGGG
T ss_pred HHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECC--HHHHHH
Confidence 3344556665555679999999999999999999844 432 234456778998854 555443
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=98.30 E-value=1.3e-06 Score=81.49 Aligned_cols=137 Identities=13% Similarity=0.036 Sum_probs=88.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhc--cceeecC
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKA--DGFAGVF 246 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~v~a~~~ 246 (450)
++.|++.++|+.|++.|+++.++|+.....+..+.+ |+.. + ..++....... ...+...+.+- ..+-...
T Consensus 77 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~--~-~~v~~~~~~~~---~~~~~~~~~kp~p~~~~~~~ 148 (236)
T 2fea_A 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVE--K-DRIYCNHASFD---NDYIHIDWPHSCKGTCSNQC 148 (236)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSC--G-GGEEEEEEECS---SSBCEEECTTCCCTTCCSCC
T ss_pred CCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCC--C-CeEEeeeeEEc---CCceEEecCCCCcccccccc
Confidence 478999999999999999999999999988888777 6532 1 11111110000 00000000000 0011112
Q ss_pred hhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhc--cCEEecCCCchHHHHHHHH
Q 013069 247 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSA--ADIVLTEPGLNVIITAVLI 315 (450)
Q Consensus 247 P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~a--aDivl~~~~l~~i~~~I~~ 315 (450)
...|..+++.+......|+||||+.||+.+.+.|++.++..+..+..... +|+++ +++..+..++..
T Consensus 149 ~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~~ 217 (236)
T 2fea_A 149 GCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPY--QDFYEIRKEIEN 217 (236)
T ss_dssp SSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECC--SSHHHHHHHHHT
T ss_pred CCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeechHHHHHHHHCCCCeeec--CCHHHHHHHHHH
Confidence 55788999999877889999999999999999999998753322333333 67766 458888777654
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.29 E-value=2.8e-07 Score=93.08 Aligned_cols=114 Identities=12% Similarity=0.124 Sum_probs=73.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhc-cceeecC
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKA-DGFAGVF 246 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~v~a~~~ 246 (450)
-.++|++++.|+.|++.|++|+|+||.....+..+|+++|+.-...+..+ .|......-.. .+.... ....-+.
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~V-ig~~l~~~~dG----~~tg~~~~~~p~~~ 294 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKV-LGLRLMKDDEG----KILPKFDKDFPISI 294 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGE-EEECEEECTTC----CEEEEECTTSCCCS
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceE-EEeEEEEecCC----ceeeeecCccceeC
Confidence 34789999999999999999999999999999999999987432221111 12111000000 000000 0001134
Q ss_pred hhhHHHHHHHHhhc---CCEEEEecCCCCChHhHhh-CCeeEEe
Q 013069 247 PEHKYEIVKHLQAR---NHICGMIGNGVNDAPALKK-ADIGIAV 286 (450)
Q Consensus 247 P~~K~~iV~~lq~~---g~~v~~iGDG~ND~~al~~-AdvGIa~ 286 (450)
.+.|...|+.+... ...++++|||.||.+||+. +|.++++
T Consensus 295 ~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~l 338 (385)
T 4gxt_A 295 REGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSL 338 (385)
T ss_dssp THHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEE
T ss_pred CCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEE
Confidence 56799999876432 2348899999999999986 5555444
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.28 E-value=1e-06 Score=81.17 Aligned_cols=124 Identities=14% Similarity=0.118 Sum_probs=85.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.++++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.+. ....-.|+
T Consensus 83 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~-----------------~~~Kp~~~ 143 (222)
T 2nyv_A 83 KPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYF--DLIVGGDTF-----------------GEKKPSPT 143 (222)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC--SEEECTTSS-----------------CTTCCTTH
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHh--eEEEecCcC-----------------CCCCCChH
Confidence 46899999999999999999999999998888999999874211 011111000 01112233
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCee-EEecc--chHHHhhccCEEecCCCchHHHHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVAD--ATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvG-Ia~~~--~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
--..+++.+.-....|++|||+.||++|.+.|+++ |++.. +.... ..+|+++. ++..+..++.
T Consensus 144 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~--~~~el~~~l~ 209 (222)
T 2nyv_A 144 PVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLS--RPSDLVKLMD 209 (222)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEES--STTHHHHHHH
T ss_pred HHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEEC--CHHHHHHHHH
Confidence 33455566655556799999999999999999998 66653 22222 56888874 4777776654
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.28 E-value=2e-06 Score=81.01 Aligned_cols=126 Identities=14% Similarity=0.129 Sum_probs=84.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+..... ..++.+... ....-.|.
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~-----------------~~~kp~~~ 172 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTP-ASTVFATDV-----------------VRGRPFPD 172 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCC-SEEECGGGS-----------------SSCTTSSH
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCC-ceEecHHhc-----------------CCCCCCHH
Confidence 467899999999999999999999999988888888887642101 001100000 00111122
Q ss_pred hHHHHHHHHhhcC-CEEEEecCCCCChHhHhhCCe---eEEecc------------------------chHHHhh-ccCE
Q 013069 249 HKYEIVKHLQARN-HICGMIGNGVNDAPALKKADI---GIAVAD------------------------ATDAARS-AADI 299 (450)
Q Consensus 249 ~K~~iV~~lq~~g-~~v~~iGDG~ND~~al~~Adv---GIa~~~------------------------~~~~a~~-aaDi 299 (450)
--..+++.+.-.. ..|+||||+.||+.|.+.|++ +|+++. +.+..+. .+|+
T Consensus 173 ~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~ 252 (277)
T 3iru_A 173 MALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHY 252 (277)
T ss_dssp HHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCE
Confidence 2244556665556 789999999999999999995 555552 2334443 4899
Q ss_pred EecCCCchHHHHHHH
Q 013069 300 VLTEPGLNVIITAVL 314 (450)
Q Consensus 300 vl~~~~l~~i~~~I~ 314 (450)
++. ++..+..++.
T Consensus 253 v~~--~~~el~~~l~ 265 (277)
T 3iru_A 253 VID--SVADLETVIT 265 (277)
T ss_dssp EES--SGGGTHHHHH
T ss_pred Eec--CHHHHHHHHH
Confidence 985 4777777765
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.27 E-value=5.8e-07 Score=85.86 Aligned_cols=67 Identities=22% Similarity=0.258 Sum_probs=59.2
Q ss_pred hhHHHHHHHHhhc-C---CEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 248 EHKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 248 ~~K~~iV~~lq~~-g---~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
..|...++.+.+. | ..|+++||+.||.+|++.|++|++|+++.+.++..||+|+.+++-.+|.++|.
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~dGVa~~l~ 260 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQ 260 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCccHHHHHhCCeeCcCCCCChHHHHHH
Confidence 4788888877654 2 45999999999999999999999999999999999999999888899998886
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=98.27 E-value=1.5e-06 Score=77.30 Aligned_cols=126 Identities=13% Similarity=0.131 Sum_probs=80.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcH---------------HHHHHHHHHhC--CCCCCCCCccccCCchhhhhhcCC
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQL---------------AIAKETGRRLG--MGTNMYPSSALSGQDRDESIVALP 231 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~---------------~~a~~ia~~lg--i~~~~~~~~~l~~~~~~~~~~~~~ 231 (450)
++.+++.++|+.|++.|+++.++|+... ..+..+.+.+| +..-. .....+.+.
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~~~~~~~~~-------- 96 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAIF--MCPHGPDDG-------- 96 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEEE--EECCCTTSC--------
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEEE--EcCCCCCCC--------
Confidence 4779999999999999999999999985 45566667777 32100 000000000
Q ss_pred hhHHhhhccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCe---eEEeccchHHHh----hccCEEecCC
Q 013069 232 VDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI---GIAVADATDAAR----SAADIVLTEP 304 (450)
Q Consensus 232 ~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~Adv---GIa~~~~~~~a~----~aaDivl~~~ 304 (450)
..+..-.|+-=..+++.+.-....++||||+.||+.|.+.|++ +|..+.+..... ..+|+++.+
T Consensus 97 --------~~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~- 167 (179)
T 3l8h_A 97 --------CACRKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCED- 167 (179)
T ss_dssp --------CSSSTTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESS-
T ss_pred --------CCCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecC-
Confidence 0011112222234555555556679999999999999999995 555554444443 457988854
Q ss_pred CchHHHHHHH
Q 013069 305 GLNVIITAVL 314 (450)
Q Consensus 305 ~l~~i~~~I~ 314 (450)
+..+...+.
T Consensus 168 -l~el~~~l~ 176 (179)
T 3l8h_A 168 -LAAVAEQLL 176 (179)
T ss_dssp -HHHHHHHHH
T ss_pred -HHHHHHHHH
Confidence 777776664
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.26 E-value=1.7e-06 Score=79.58 Aligned_cols=122 Identities=10% Similarity=0.074 Sum_probs=81.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++...+. ....-.|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~-----------------~~~Kp~~~ 163 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYF--DSIIGSGDT-----------------GTIKPSPE 163 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEETSS-----------------SCCTTSSH
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhhe--eeEEccccc-----------------CCCCCChH
Confidence 46899999999999999999999999999999999999985211 000000000 00111222
Q ss_pred hHHHHHHHHhhcCC-EEEEecCCCCChHhHhhCCe-eEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 249 HKYEIVKHLQARNH-ICGMIGNGVNDAPALKKADI-GIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 249 ~K~~iV~~lq~~g~-~v~~iGDG~ND~~al~~Adv-GIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
--..+++.+.-... .|++|||+.||+.|.+.|++ +|.++++.+ ..+|+++. ++..+..++.
T Consensus 164 ~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~---~~~~~~~~--~~~el~~~l~ 226 (231)
T 3kzx_A 164 PVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI---IKDILSFK--NFYDIRNFIC 226 (231)
T ss_dssp HHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEECC--------CCEEES--SHHHHHHHHH
T ss_pred HHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC---CCCceeeC--CHHHHHHHHH
Confidence 23455566655555 79999999999999999997 677765543 35677664 4777776654
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.26 E-value=1.6e-06 Score=80.17 Aligned_cols=127 Identities=16% Similarity=0.085 Sum_probs=79.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecCh
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 247 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 247 (450)
.++.+++.+.++.|++.|+++.++|+.....+....+. |+.....+..++.+.+. ....-.|
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~-----------------~~~kp~~ 168 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDV-----------------KYGKPNP 168 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGC-----------------SSCTTSS
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccC-----------------CCCCCCC
Confidence 35779999999999999999999999988777776666 77421100111111000 0111122
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCee-EEeccc--hH--HHhhccCEEecCCCchHHHHHHH
Q 013069 248 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADA--TD--AARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 248 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvG-Ia~~~~--~~--~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
+--..+++.+.-....|++|||+.||+.|.+.|+++ |.+.++ .. ..+..+|+++.+ +..+..++.
T Consensus 169 ~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~--~~el~~~l~ 238 (247)
T 3dv9_A 169 EPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHS--MPDFNKNWE 238 (247)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESS--HHHHHHHHH
T ss_pred HHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECC--HHHHHHHHH
Confidence 333445555555556799999999999999999975 444432 22 223478999854 777766655
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=98.26 E-value=1.6e-06 Score=80.60 Aligned_cols=126 Identities=17% Similarity=0.106 Sum_probs=81.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.+.++.|++.|+++.++|+.....+....+. |+.....+..++.+.+. ....-.|+
T Consensus 109 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~-----------------~~~kp~~~ 170 (243)
T 3qxg_A 109 ERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDV-----------------KYGKPNPE 170 (243)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTC-----------------SSCTTSSH
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhC-----------------CCCCCChH
Confidence 4679999999999999999999999987777766666 76421100111111100 01111222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCee-EEeccchH----HHhhccCEEecCCCchHHHHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADATD----AARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvG-Ia~~~~~~----~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
--..+++.+.-....|++|||+.||+.|.+.|+++ |.+.++.. ..+..+|+++. ++..+..++.
T Consensus 171 ~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~--s~~el~~~l~ 239 (243)
T 3qxg_A 171 PYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFP--SMQTLCDSWD 239 (243)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEES--CHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEEC--CHHHHHHHHH
Confidence 33345555554556799999999999999999985 44543322 22346899984 4777776654
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.25 E-value=6.2e-07 Score=80.63 Aligned_cols=121 Identities=17% Similarity=0.113 Sum_probs=82.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++...+. ....-.|+
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 149 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFF--DIVLSGEEF-----------------KESKPNPE 149 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGC-----------------SSCTTSSH
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhhe--eeEeecccc-----------------cCCCCChH
Confidence 36789999999999999999999999999999999999884211 001100000 01111222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccc--hHHHhhccCEEecCCCchHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADA--TDAARSAADIVLTEPGLNVII 310 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~--~~~a~~aaDivl~~~~l~~i~ 310 (450)
--..+++.+.-....|++|||+.||+.|.+.|++++.+.+. .......+|+++.+ +..+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~--~~el~ 211 (214)
T 3e58_A 150 IYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDS--LTDVL 211 (214)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESS--GGGGG
T ss_pred HHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHHH--HHHHH
Confidence 33455555555556799999999999999999998887532 33444778988854 54443
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=98.24 E-value=1.5e-06 Score=81.66 Aligned_cols=127 Identities=18% Similarity=0.094 Sum_probs=84.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccc-eeecCh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADG-FAGVFP 247 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v-~a~~~P 247 (450)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+..-. ...++.+.+ .. ...-.|
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f-~~~i~~~~~-----------------~~~~~Kp~~ 171 (259)
T 4eek_A 110 TAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELA-GEHIYDPSW-----------------VGGRGKPHP 171 (259)
T ss_dssp EECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHH-CSCEECGGG-----------------GTTCCTTSS
T ss_pred CcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhc-cceEEeHhh-----------------cCcCCCCCh
Confidence 35789999999999999999999999999999999988874100 000000000 00 111112
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCee-EEeccc-------hHHH-hhccCEEecCCCchHHHHHHHH
Q 013069 248 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADA-------TDAA-RSAADIVLTEPGLNVIITAVLI 315 (450)
Q Consensus 248 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvG-Ia~~~~-------~~~a-~~aaDivl~~~~l~~i~~~I~~ 315 (450)
+--..+++.+.-....|++|||+.||+.|.+.|+++ |.+..+ .+.. ...+|+++. ++..+..++..
T Consensus 172 ~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~--~l~el~~~l~~ 246 (259)
T 4eek_A 172 DLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLT--SHAELRAALAE 246 (259)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEEC--SHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhhC--CHHHHHHHHHh
Confidence 222344555544456799999999999999999998 555433 2233 345899984 58888877764
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=98.24 E-value=9.1e-07 Score=84.47 Aligned_cols=129 Identities=11% Similarity=0.004 Sum_probs=84.4
Q ss_pred CCCCcchHHHHHHHHhCCC--eEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeec
Q 013069 168 DPPIHDSAETIRRALSLGL--GVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 245 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi--~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~ 245 (450)
-++.+++.++++.|++.|+ +++++|+.....+..+.+.+|+.... ..++........ .....-
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~f--d~v~~~~~~~~~-------------~~~~Kp 205 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLF--DGLTYCDYSRTD-------------TLVCKP 205 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSC--SEEECCCCSSCS-------------SCCCTT
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCccccc--ceEEEeccCCCc-------------ccCCCc
Confidence 3578999999999999999 99999999999999999999985321 011110000000 001111
Q ss_pred ChhhHHHHHHHHhhcC-CEEEEecCCCCChHhHhhCCeeEEeccchHHH------hhccCEEecCCCchHHHHHH
Q 013069 246 FPEHKYEIVKHLQARN-HICGMIGNGVNDAPALKKADIGIAVADATDAA------RSAADIVLTEPGLNVIITAV 313 (450)
Q Consensus 246 ~P~~K~~iV~~lq~~g-~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a------~~aaDivl~~~~l~~i~~~I 313 (450)
.|+-=..+++.+.-.. ..|+||||+.||+.|.+.|++|.+|+++.... ...+|+++.+ +..+..++
T Consensus 206 ~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~s--l~el~~~l 278 (282)
T 3nuq_A 206 HVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISD--ILELPHVV 278 (282)
T ss_dssp SHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESS--GGGGGGTS
T ss_pred CHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCC--HHHHHHHh
Confidence 1222233444444455 78999999999999999999998887443322 3377888854 66555443
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.24 E-value=7.8e-07 Score=85.75 Aligned_cols=66 Identities=23% Similarity=0.294 Sum_probs=58.9
Q ss_pred hHHHHHHHHhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 249 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 249 ~K~~iV~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
+|...++.+.+. ...|+++||+.||.+|++.|++|++|+++.+..+..||+++.+++-++|.++|+
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~~~~~~a~~v~~~~~~dGVa~~i~ 285 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMK 285 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCCHHHHhhCceeecCCCcChHHHHHH
Confidence 688888777654 346999999999999999999999999999999999999999999999998886
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.23 E-value=8.9e-07 Score=86.25 Aligned_cols=72 Identities=29% Similarity=0.294 Sum_probs=62.0
Q ss_pred eecChh--hHHHHHHHHhhc-C---CEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEec-CCCchHHHHHHH
Q 013069 243 AGVFPE--HKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLT-EPGLNVIITAVL 314 (450)
Q Consensus 243 a~~~P~--~K~~iV~~lq~~-g---~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~-~~~l~~i~~~I~ 314 (450)
.++.|. .|...++.+.+. | ..|+++||+.||.+|++.|++|++|+++.+.+++.||+++. +++.++|..+|.
T Consensus 216 lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~~dGVa~~l~ 294 (301)
T 2b30_A 216 AEVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLK 294 (301)
T ss_dssp EEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred eEecCCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCcHHHHhhCCEEEccCCCCcHHHHHHH
Confidence 444444 799888887654 2 45999999999999999999999999999999999999999 999999998886
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.22 E-value=2.4e-06 Score=78.37 Aligned_cols=121 Identities=12% Similarity=0.081 Sum_probs=77.8
Q ss_pred CCcchHHHHHHHHhC-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 170 PIHDSAETIRRALSL-GLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 170 lr~~~~~~I~~l~~~-Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
+.+++.+.++.|++. |+++.++|+.....+....+.+|+.... . .++.+.+ +. ..|.
T Consensus 94 ~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f-~-~~~~~~~------------------~~--~~~k 151 (234)
T 2hcf_A 94 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYF-P-FGAFADD------------------AL--DRNE 151 (234)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTC-S-CEECTTT------------------CS--SGGG
T ss_pred cCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhc-C-cceecCC------------------Cc--Cccc
Confidence 679999999999999 9999999999998888888888875321 1 0111100 00 0111
Q ss_pred hHHH----HHHHHh--hcCCEEEEecCCCCChHhHhhCCee---EEeccchHHHhh--ccCEEecCCCchHHHHHHH
Q 013069 249 HKYE----IVKHLQ--ARNHICGMIGNGVNDAPALKKADIG---IAVADATDAARS--AADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 249 ~K~~----iV~~lq--~~g~~v~~iGDG~ND~~al~~AdvG---Ia~~~~~~~a~~--aaDivl~~~~l~~i~~~I~ 314 (450)
-+.. +.+.+. -....|++|||+.||+.|.+.|+++ ++.+.+...... .+|+++.+ +..+..++.
T Consensus 152 ~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~~--~~el~~~l~ 226 (234)
T 2hcf_A 152 LPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKN--FAETDEVLA 226 (234)
T ss_dssp HHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESC--SCCHHHHHH
T ss_pred hHHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeCC--HHhHHHHHH
Confidence 1222 334443 2345699999999999999999955 444433333332 38988854 455554443
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.19 E-value=2.7e-06 Score=77.48 Aligned_cols=114 Identities=12% Similarity=0.023 Sum_probs=78.4
Q ss_pred CCCcchHHHHHHHHhCC-CeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecCh
Q 013069 169 PPIHDSAETIRRALSLG-LGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 247 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~G-i~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 247 (450)
++.+++.+.++.|++.| +++.++|+........+.+.+|+..... .+++. +
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~--------------------------~~~~~--~ 156 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFD--------------------------HIEVM--S 156 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCS--------------------------EEEEE--S
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhh--------------------------eeeec--C
Confidence 46789999999999999 9999999998888888888888742100 01121 1
Q ss_pred hhHHHHHH----HHhhcCCEEEEecCCC-CChHhHhhCCeeEEec-------cchHHHhhcc-CEEecCCCchHHHHH
Q 013069 248 EHKYEIVK----HLQARNHICGMIGNGV-NDAPALKKADIGIAVA-------DATDAARSAA-DIVLTEPGLNVIITA 312 (450)
Q Consensus 248 ~~K~~iV~----~lq~~g~~v~~iGDG~-ND~~al~~AdvGIa~~-------~~~~~a~~aa-Divl~~~~l~~i~~~ 312 (450)
..|..+++ .+.-....|++|||+. ||+.|.+.|++++++- ++.......+ |+++.+ +..+..+
T Consensus 157 kpk~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~--l~el~~~ 232 (234)
T 3ddh_A 157 DKTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKR--LDDLLSL 232 (234)
T ss_dssp CCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSS--GGGHHHH
T ss_pred CCCHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceeccc--HHHHHHh
Confidence 22444444 3333446699999997 9999999999998872 3333323344 888744 7766654
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.18 E-value=8.2e-07 Score=84.75 Aligned_cols=72 Identities=19% Similarity=0.284 Sum_probs=61.5
Q ss_pred eecChh--hHHHHHHHHhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 243 AGVFPE--HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 243 a~~~P~--~K~~iV~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
.++.|. .|...++.+.+. ...|+++||+.||.+|++.|++|++|+++.+..++.||+++.+++..+|.++|.
T Consensus 182 ~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 182 LEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp EEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred EEEeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCCHHHHhhCCEEEccCCcchHHHHHH
Confidence 344554 788888877653 345999999999999999999999999999999999999999988999998875
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.18 E-value=1e-06 Score=83.08 Aligned_cols=72 Identities=17% Similarity=0.183 Sum_probs=60.4
Q ss_pred eecChh--hHHHHHHHHhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhc-------cCEEecCCCchHH
Q 013069 243 AGVFPE--HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSA-------ADIVLTEPGLNVI 309 (450)
Q Consensus 243 a~~~P~--~K~~iV~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~a-------aDivl~~~~l~~i 309 (450)
-++.|. .|...++.+.+. ...|+++||+.||.+|++.|++|++|+++.+..++. ||+++.+++-+++
T Consensus 154 lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na~~~~k~~a~~~~~~a~~v~~~~~~dGv 233 (244)
T 1s2o_A 154 VDLLPQRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAI 233 (244)
T ss_dssp EEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHH
T ss_pred EEeccCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcCCcHHHHHHHhcccccceeecCCcchhHH
Confidence 344443 688888877654 245999999999999999999999999999999985 8899999889999
Q ss_pred HHHHH
Q 013069 310 ITAVL 314 (450)
Q Consensus 310 ~~~I~ 314 (450)
.++|+
T Consensus 234 a~~i~ 238 (244)
T 1s2o_A 234 LEAIA 238 (244)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98886
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=2.6e-06 Score=79.00 Aligned_cols=124 Identities=14% Similarity=0.089 Sum_probs=82.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.+. ....-.|+
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~~ 165 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVL--DSCLSADDL-----------------KIYKPDPR 165 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGT-----------------TCCTTSHH
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHc--CEEEEcccc-----------------CCCCCCHH
Confidence 47799999999999999999999999999888999999874211 001100000 01111222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEe---ccchHHHhhcc-CEEecCCCchHHHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV---ADATDAARSAA-DIVLTEPGLNVIITAV 313 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~---~~~~~~a~~aa-Divl~~~~l~~i~~~I 313 (450)
--..+++.+.-....|++|||+.||+.|.+.|++.... ++..+.....+ |+++. ++..+..++
T Consensus 166 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~--~~~el~~~l 232 (240)
T 2no4_A 166 IYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQVN--SLSELWPLL 232 (240)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEES--SGGGHHHHH
T ss_pred HHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceeeC--CHHHHHHHH
Confidence 33345555554556799999999999999999976544 33322233456 88874 477776655
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=98.16 E-value=1.4e-06 Score=80.16 Aligned_cols=124 Identities=10% Similarity=0.086 Sum_probs=83.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++...+. ....-.|+
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~~ 155 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF--DHLLSVDPV-----------------QVYKPDNR 155 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEESGGG-----------------TCCTTSHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhh--heEEEeccc-----------------CCCCCCHH
Confidence 46799999999999999999999999998888888888874211 011110000 01112233
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEec----cchHHHhhccCEEecCCCchHHHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA----DATDAARSAADIVLTEPGLNVIITAV 313 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~----~~~~~a~~aaDivl~~~~l~~i~~~I 313 (450)
--..+++.+.-....|++|||+.||+.|.+.|++++++- +..+..+..+|+++. ++..+..++
T Consensus 156 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l 222 (232)
T 1zrn_A 156 VYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVT--SLRAVVELF 222 (232)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEES--SHHHHHTTC
T ss_pred HHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEEC--CHHHHHHHH
Confidence 334455555545567999999999999999999998873 222333456888874 466665544
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.15 E-value=1.5e-05 Score=73.87 Aligned_cols=124 Identities=15% Similarity=0.189 Sum_probs=81.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhh
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 249 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 249 (450)
+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+... ....-.|+-
T Consensus 95 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~~~ 155 (241)
T 2hoq_A 95 EVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFF--EHVIISDFE-----------------GVKKPHPKI 155 (241)
T ss_dssp BCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGC--SEEEEGGGG-----------------TCCTTCHHH
T ss_pred CCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhc--cEEEEeCCC-----------------CCCCCCHHH
Confidence 6789999999999999999999999988888888888874211 001100000 001111222
Q ss_pred HHHHHHHHhhcCCEEEEecCCC-CChHhHhhCCeeEEe---ccchHHHhh---ccCEEecCCCchHHHHHHH
Q 013069 250 KYEIVKHLQARNHICGMIGNGV-NDAPALKKADIGIAV---ADATDAARS---AADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 250 K~~iV~~lq~~g~~v~~iGDG~-ND~~al~~AdvGIa~---~~~~~~a~~---aaDivl~~~~l~~i~~~I~ 314 (450)
=..+++.+.-....|+||||+. ||+.|.+.|+++.+. +........ .+|+++. ++..+...+.
T Consensus 156 ~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i~--~~~el~~~l~ 225 (241)
T 2hoq_A 156 FKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEID--NLESLLEVLA 225 (241)
T ss_dssp HHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEES--STTHHHHHHH
T ss_pred HHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEEC--CHHHHHHHHH
Confidence 2334445544456799999998 999999999998665 233333332 6898875 4777766654
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.14 E-value=6e-06 Score=75.72 Aligned_cols=122 Identities=12% Similarity=0.099 Sum_probs=81.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.+.++.|+ .|+++.++|+..........+.+|+.... ..++..... ....-.|+
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 166 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYF--KKIILSEDL-----------------GVLKPRPE 166 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGC--SEEEEGGGT-----------------TCCTTSHH
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhc--eeEEEeccC-----------------CCCCCCHH
Confidence 46789999999999 99999999999988888888888874211 000000000 00111122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCC-CChHhHhhCCeeEEeccchH--HHhhccCEEecCCCchHHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIGIAVADATD--AARSAADIVLTEPGLNVIITA 312 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~-ND~~al~~AdvGIa~~~~~~--~a~~aaDivl~~~~l~~i~~~ 312 (450)
--..+++.+.-....|++|||+. ||+.|.+.|++++++.+... .....+|+++.+ +..+..+
T Consensus 167 ~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~s--l~e~~~~ 231 (240)
T 3qnm_A 167 IFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHS--LKELMNL 231 (240)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEESS--THHHHHH
T ss_pred HHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEECC--HHHHHHH
Confidence 22334444444456799999996 99999999999999975433 456678999855 5555443
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.08 E-value=7.9e-07 Score=80.59 Aligned_cols=119 Identities=13% Similarity=0.097 Sum_probs=78.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.+.++.|++. +++.++|+.....+..+.+.+|+.... ..++.+.+. ....-.|+
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~KP~~~ 142 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRM--AVTISADDT-----------------PKRKPDPL 142 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGE--EEEECGGGS-----------------SCCTTSSH
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhc--cEEEecCcC-----------------CCCCCCcH
Confidence 3688999999999999 999999999988888888877763110 000000000 00111122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEecc----chHHHhhccCEEecCCCchHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVAD----ATDAARSAADIVLTEPGLNVII 310 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~----~~~~a~~aaDivl~~~~l~~i~ 310 (450)
--..+++.+.-....|++|||+.||+.|.+.|++++++.+ +.+..+. +|+++.+ +..+.
T Consensus 143 ~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~~--~~el~ 205 (209)
T 2hdo_A 143 PLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQK--PLDIL 205 (209)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEESS--GGGGG
T ss_pred HHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeCC--HHHHH
Confidence 2244555555445679999999999999999999998743 3344444 8998854 44443
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.08 E-value=2.7e-06 Score=80.56 Aligned_cols=67 Identities=25% Similarity=0.307 Sum_probs=57.3
Q ss_pred hhHHHHHHHHhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 248 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 248 ~~K~~iV~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
..|...++.+.+. ...|+++||+.||.+|++.|++|++|+++.+..+..||+++.+++-+++..++.
T Consensus 186 ~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~l~ 256 (261)
T 2rbk_A 186 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMK 256 (261)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccHHHHhhCCEEeccCchhhHHHHHH
Confidence 3677777666543 346999999999999999999999999999999999999998888888988776
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=98.05 E-value=1.3e-05 Score=73.40 Aligned_cols=124 Identities=11% Similarity=0.115 Sum_probs=81.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.+.++.|++. +++.++|+.....+....+.+|+.... ..++...+. ....-.|+
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 162 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFF--KDIFVSEDT-----------------GFQKPMKE 162 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGC--SEEEEGGGT-----------------TSCTTCHH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhh--heEEEeccc-----------------CCCCCChH
Confidence 4678999999999999 999999999998888888888875211 000000000 00111122
Q ss_pred hHHHHHHHHh-hcCCEEEEecCCC-CChHhHhhCCeeEE-ecc--chHHHhhccCEEecCCCchHHHHHHH
Q 013069 249 HKYEIVKHLQ-ARNHICGMIGNGV-NDAPALKKADIGIA-VAD--ATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 249 ~K~~iV~~lq-~~g~~v~~iGDG~-ND~~al~~AdvGIa-~~~--~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
--..+.+.+. -....|++|||+. ||+.|.+.|+++.. +.. ..+..+..+|+++. ++..+..++.
T Consensus 163 ~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~--~~~el~~~l~ 231 (238)
T 3ed5_A 163 YFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIR--KLEELYHILN 231 (238)
T ss_dssp HHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEES--SGGGHHHHHT
T ss_pred HHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEEC--CHHHHHHHHH
Confidence 2223333333 3335699999998 99999999999544 443 35556678899985 4777777664
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.04 E-value=6.6e-06 Score=78.42 Aligned_cols=114 Identities=14% Similarity=0.031 Sum_probs=78.1
Q ss_pred CCcchHHHHHHHHhC-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 170 PIHDSAETIRRALSL-GLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 170 lr~~~~~~I~~l~~~-Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
+.+++.+.++.|++. |+++.++|+.....+....+.+|+.. + ..++.+.+.. ...-.|+
T Consensus 115 ~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~--f-~~i~~~~~~~-----------------~~kp~~~ 174 (275)
T 2qlt_A 115 EVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKR--P-EYFITANDVK-----------------QGKPHPE 174 (275)
T ss_dssp ECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCC--C-SSEECGGGCS-----------------SCTTSSH
T ss_pred cCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCc--c-CEEEEcccCC-----------------CCCCChH
Confidence 578999999999999 99999999999988888888888751 1 1111111000 0011222
Q ss_pred hHHHHHHHHhh-------cCCEEEEecCCCCChHhHhhCCeeEEe---ccchHHHhh-ccCEEecC
Q 013069 249 HKYEIVKHLQA-------RNHICGMIGNGVNDAPALKKADIGIAV---ADATDAARS-AADIVLTE 303 (450)
Q Consensus 249 ~K~~iV~~lq~-------~g~~v~~iGDG~ND~~al~~AdvGIa~---~~~~~~a~~-aaDivl~~ 303 (450)
--..+++.+.- ....|++|||+.||+.|++.|++++++ +++.+..+. .||+++.+
T Consensus 175 ~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~ 240 (275)
T 2qlt_A 175 PYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKN 240 (275)
T ss_dssp HHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESS
T ss_pred HHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC
Confidence 23445555655 556799999999999999999987766 333333343 58998754
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=98.02 E-value=2.8e-05 Score=69.94 Aligned_cols=137 Identities=15% Similarity=0.108 Sum_probs=90.4
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcH---HHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceee
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQL---AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 244 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~---~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~ 244 (450)
-++.+++.++++.|++.|+++.++|+... ..+..+.+.+|+..-. ..++...+... ...+..
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~f--d~i~~~~~~~~-------------~~~~~K 97 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYF--DFIYASNSELQ-------------PGKMEK 97 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGE--EEEEECCTTSS-------------TTCCCT
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhhe--EEEEEcccccc-------------ccCCCC
Confidence 35889999999999999999999998776 7888889999985210 00000000000 000112
Q ss_pred cChhhHHHHHHHHhhcCCEEEEecCC-CCChHhHhhCCeeEEe-ccchH-----HHh-hccCEEecCCCchHHHHHHHHH
Q 013069 245 VFPEHKYEIVKHLQARNHICGMIGNG-VNDAPALKKADIGIAV-ADATD-----AAR-SAADIVLTEPGLNVIITAVLIS 316 (450)
Q Consensus 245 ~~P~~K~~iV~~lq~~g~~v~~iGDG-~ND~~al~~AdvGIa~-~~~~~-----~a~-~aaDivl~~~~l~~i~~~I~~~ 316 (450)
-.|+--..+++.+......|+||||+ .+|+.+-+.|++.... ..+.. ... ..+|.++...++..+..++...
T Consensus 98 P~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l~ 177 (189)
T 3ib6_A 98 PDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLLL 177 (189)
T ss_dssp TSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHHH
T ss_pred cCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHHHH
Confidence 22333345555555555679999999 7999999999997554 32221 111 2678888866799999988876
Q ss_pred HHH
Q 013069 317 RAI 319 (450)
Q Consensus 317 R~~ 319 (450)
+.-
T Consensus 178 ~~~ 180 (189)
T 3ib6_A 178 KKI 180 (189)
T ss_dssp HHH
T ss_pred HHh
Confidence 653
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=98.01 E-value=1.2e-05 Score=71.31 Aligned_cols=106 Identities=12% Similarity=0.079 Sum_probs=69.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccc-eeecChh
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADG-FAGVFPE 248 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v-~a~~~P~ 248 (450)
+.+++.+.++.|++.|+++.++|+... .+....+.+|+.... ..++.+. .+ ...-.|+
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f--~~~~~~~------------------~~~~~kp~~~ 141 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYF--TEVVTSS------------------SGFKRKPNPE 141 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGE--EEEECGG------------------GCCCCTTSCH
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhhe--eeeeecc------------------ccCCCCCCHH
Confidence 678999999999999999999998864 566777777764210 0000000 00 0011122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccC
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAAD 298 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaD 298 (450)
--..+++.+.-. .|+++||+.||++|.+.|++++++.+.....++..+
T Consensus 142 ~~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~l~ 189 (190)
T 2fi1_A 142 SMLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLD 189 (190)
T ss_dssp HHHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHT
T ss_pred HHHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEEECCCCChhhccC
Confidence 223344444333 799999999999999999999888766666665544
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=1.4e-05 Score=73.33 Aligned_cols=135 Identities=18% Similarity=0.184 Sum_probs=82.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCc---------------HHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQ---------------LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVD 233 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~---------------~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~ 233 (450)
++.+++.++|+.|++.|+++.++|+.. ...+..+.+.+|+. +..........+....
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---f~~~~~~~~~~~~~~~----- 121 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD---LDGIYYCPHHPQGSVE----- 121 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC---CSEEEEECCBTTCSSG-----
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc---eEEEEECCcCCCCccc-----
Confidence 678999999999999999999999998 46677778888874 1111111100000000
Q ss_pred HHhhhccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCee--EEecc---chHHHhhccCEEecCCCchH
Q 013069 234 ELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG--IAVAD---ATDAARSAADIVLTEPGLNV 308 (450)
Q Consensus 234 ~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvG--Ia~~~---~~~~a~~aaDivl~~~~l~~ 308 (450)
.. .....+..-.|+--..+++.+.-....++||||+.||+.+.+.|++. |.+.. ..+.....+|+++. ++..
T Consensus 122 ~~-~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~--~l~e 198 (211)
T 2gmw_A 122 EF-RQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLN--SLAD 198 (211)
T ss_dssp GG-BSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEES--CGGG
T ss_pred cc-CccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeC--CHHH
Confidence 00 00000111223223344555554456799999999999999999965 44432 22333446898884 4777
Q ss_pred HHHHHH
Q 013069 309 IITAVL 314 (450)
Q Consensus 309 i~~~I~ 314 (450)
+..++.
T Consensus 199 l~~~l~ 204 (211)
T 2gmw_A 199 LPQAIK 204 (211)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776654
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.01 E-value=5.4e-06 Score=77.07 Aligned_cols=122 Identities=12% Similarity=0.117 Sum_probs=83.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.+.++.|++. +++.++|+........+.+.+|+. .. .++.. + .+ ....-.|+
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~---f~-~~~~~-~-----------~~-----~~~kp~~~ 177 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP---WD-MLLCA-D-----------LF-----GHYKPDPQ 177 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC---CS-EECCH-H-----------HH-----TCCTTSHH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC---cc-eEEee-c-----------cc-----ccCCCCHH
Confidence 4578999999999885 999999999998888888899874 10 00100 0 00 01111122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEecc--------chHHH--hhccCEEecCCCchHHHHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVAD--------ATDAA--RSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~--------~~~~a--~~aaDivl~~~~l~~i~~~I~ 314 (450)
--..+++.+.-....|++|||+.||+.|.+.|++++++.+ +.+.. +..+|+++. ++..+..++.
T Consensus 178 ~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~--~l~el~~~l~ 251 (254)
T 3umc_A 178 VYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIAS--DLLDLHRQLA 251 (254)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEES--SHHHHHHHHH
T ss_pred HHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEEC--CHHHHHHHhc
Confidence 2233445554445679999999999999999999999975 12222 567899985 4777776664
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=98.01 E-value=9.5e-06 Score=72.85 Aligned_cols=87 Identities=11% Similarity=0.086 Sum_probs=66.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCc-HHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceee--c
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQ-LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG--V 245 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~-~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~--~ 245 (450)
++.+++.++|+.|++.|+++.++||.. ...+..+.+.+|+.. .|.. +
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~------------------------------~f~~~~~ 117 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFR------------------------------YFVHREI 117 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTT------------------------------TEEEEEE
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHh------------------------------hcceeEE
Confidence 578999999999999999999999998 688999999999852 1221 1
Q ss_pred ChhhHHHHH----HHHhhcCCEEEEecCCCCChHhHhhCCeeEE
Q 013069 246 FPEHKYEIV----KHLQARNHICGMIGNGVNDAPALKKADIGIA 285 (450)
Q Consensus 246 ~P~~K~~iV----~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa 285 (450)
.+..|.... +.+.-....|++|||+.+|+.+.+.|++...
T Consensus 118 ~~~~k~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i 161 (187)
T 2wm8_A 118 YPGSKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCI 161 (187)
T ss_dssp SSSCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred EeCchHHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEE
Confidence 223343333 3333334569999999999999999998644
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=98.01 E-value=9.3e-06 Score=75.12 Aligned_cols=123 Identities=11% Similarity=0.042 Sum_probs=83.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.+.++.|++. +++.++|+........+.+.+|+.-. . ++.. + .+ ....-.|+
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f~---~-~~~~---~---------~~-----~~~kp~~~ 173 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPWD---V-IIGS---D---------IN-----RKYKPDPQ 173 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCCS---C-CCCH---H---------HH-----TCCTTSHH
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCee---E-EEEc---C---------cC-----CCCCCCHH
Confidence 4678999999999996 99999999999999999999988411 0 0000 0 00 00111121
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHH----------HhhccCEEecCCCchHHHHHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDA----------ARSAADIVLTEPGLNVIITAVLI 315 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~----------a~~aaDivl~~~~l~~i~~~I~~ 315 (450)
-=..+++.+.-....|++|||+.||+.|.+.|++++++.+.... ....+|+++. ++..+..++..
T Consensus 174 ~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~--~~~el~~~l~~ 248 (254)
T 3umg_A 174 AYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISAT--DITDLAAQLRA 248 (254)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEES--SHHHHHHHHHH
T ss_pred HHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEEC--CHHHHHHHhcC
Confidence 11233344433446699999999999999999999998752211 3567899884 58888877653
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=98.01 E-value=9.1e-06 Score=76.13 Aligned_cols=123 Identities=13% Similarity=0.135 Sum_probs=83.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.++++.|+ |+++.++|+.....+..+.+.+|+.... ..++...+. ....-.|+
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f--~~~~~~~~~-----------------~~~Kp~~~ 151 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF--DAVISVDAK-----------------RVFKPHPD 151 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGG-----------------TCCTTSHH
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhc--cEEEEcccc-----------------CCCCCCHH
Confidence 57799999999999 9999999999999998898888874211 001100000 01112233
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccc---------------------------hHHHhhccCEEe
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADA---------------------------TDAARSAADIVL 301 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~---------------------------~~~a~~aaDivl 301 (450)
--..+++.+.-....|+||||+.||+.|.+.|+++.++.+. .+..+..+|+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (253)
T 1qq5_A 152 SYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVV 231 (253)
T ss_dssp HHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEE
T ss_pred HHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeee
Confidence 33445555544456799999999999999999999888654 122345688888
Q ss_pred cCCCchHHHHHHH
Q 013069 302 TEPGLNVIITAVL 314 (450)
Q Consensus 302 ~~~~l~~i~~~I~ 314 (450)
. ++..+..++.
T Consensus 232 ~--~~~el~~~l~ 242 (253)
T 1qq5_A 232 P--ALGDLPRLVR 242 (253)
T ss_dssp S--SGGGHHHHHH
T ss_pred C--CHHHHHHHHH
Confidence 4 4777776664
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.99 E-value=1.4e-05 Score=74.34 Aligned_cols=122 Identities=16% Similarity=0.206 Sum_probs=78.9
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhh
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 249 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 249 (450)
+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+. . .. .++.+.+. ....-.|+-
T Consensus 111 ~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~-f~-~~~~~~~~-----------------~~~Kp~p~~ 170 (240)
T 2hi0_A 111 PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-S-FD-FALGEKSG-----------------IRRKPAPDM 170 (240)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-T-CS-EEEEECTT-----------------SCCTTSSHH
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-c-ee-EEEecCCC-----------------CCCCCCHHH
Confidence 5689999999999999999999999888888888888874 1 11 11111000 001111221
Q ss_pred HHHHHHHHhhcCCEEEEecCCCCChHhHhhCCee-EEe--ccch-HHHh-hccCEEecCCCchHHHHHH
Q 013069 250 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAV--ADAT-DAAR-SAADIVLTEPGLNVIITAV 313 (450)
Q Consensus 250 K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvG-Ia~--~~~~-~~a~-~aaDivl~~~~l~~i~~~I 313 (450)
=..+++.+.-....|+||||+.||+.|.+.|++. |++ +.+. +..+ ..+|+++. ++..+...+
T Consensus 171 ~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~--~~~el~~~l 237 (240)
T 2hi0_A 171 TSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVD--TAEKLEEAI 237 (240)
T ss_dssp HHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEEC--SHHHHHHHH
T ss_pred HHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEEC--CHHHHHHHh
Confidence 1334444544456799999999999999999994 344 3322 3333 36888874 466665544
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.99 E-value=9.3e-06 Score=74.31 Aligned_cols=122 Identities=11% Similarity=0.117 Sum_probs=80.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.++++.|++ |+++.++|+..........+.++-. + ..++... ++ ......|+
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~~---f-d~i~~~~------------~~-----~~~KP~~~ 156 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGVE---F-DHIITAQ------------DV-----GSYKPNPN 156 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCSC---C-SEEEEHH------------HH-----TSCTTSHH
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCCc---c-CEEEEcc------------cc-----CCCCCCHH
Confidence 578999999999999 8999999999887776665543311 0 0011000 00 01222333
Q ss_pred hHHHH---HHHHhhcCCEEEEecCCC-CChHhHhhCCeeEEeccch-----------HHHhhccCEEecCCCchHHHHHH
Q 013069 249 HKYEI---VKHLQARNHICGMIGNGV-NDAPALKKADIGIAVADAT-----------DAARSAADIVLTEPGLNVIITAV 313 (450)
Q Consensus 249 ~K~~i---V~~lq~~g~~v~~iGDG~-ND~~al~~AdvGIa~~~~~-----------~~a~~aaDivl~~~~l~~i~~~I 313 (450)
-...+ ++.+.-....|+||||+. ||+.|.+.|++++++.+.. +..+..+|+++. ++..+..++
T Consensus 157 ~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~--~~~el~~~l 234 (240)
T 3smv_A 157 NFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFN--SMGEMAEAH 234 (240)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEES--SHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeC--CHHHHHHHH
Confidence 33344 344444456799999996 9999999999999985422 233478899985 477777666
Q ss_pred H
Q 013069 314 L 314 (450)
Q Consensus 314 ~ 314 (450)
.
T Consensus 235 ~ 235 (240)
T 3smv_A 235 K 235 (240)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.98 E-value=3e-06 Score=79.05 Aligned_cols=122 Identities=14% Similarity=0.136 Sum_probs=73.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHH-HHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecCh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG-RRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 247 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia-~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 247 (450)
++.+++.++++.|++.|+++.++|+.......... +..|+... .. .++.+.+.+ .....-.|
T Consensus 112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~-f~-~~~~~~~~~---------------~~~~Kp~~ 174 (250)
T 3l5k_A 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSL-FS-HIVLGDDPE---------------VQHGKPDP 174 (250)
T ss_dssp CBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTT-SS-CEECTTCTT---------------CCSCTTST
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhh-ee-eEEecchhh---------------ccCCCCCh
Confidence 46889999999999999999999999866544332 21232110 00 001000000 00011112
Q ss_pred hhHHHHHHHHhhcC--CEEEEecCCCCChHhHhhCCe---eEEeccchHHHhhccCEEecCCCchHH
Q 013069 248 EHKYEIVKHLQARN--HICGMIGNGVNDAPALKKADI---GIAVADATDAARSAADIVLTEPGLNVI 309 (450)
Q Consensus 248 ~~K~~iV~~lq~~g--~~v~~iGDG~ND~~al~~Adv---GIa~~~~~~~a~~aaDivl~~~~l~~i 309 (450)
+--..+++.+.-.. ..|++|||+.||+.|.+.|++ +++.+++.+..+..||+++.+ +..+
T Consensus 175 ~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~s--l~el 239 (250)
T 3l5k_A 175 DIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNS--LQDF 239 (250)
T ss_dssp HHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECSC--GGGC
T ss_pred HHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeecC--HHHh
Confidence 11223333333333 779999999999999999994 555566666788899999854 4444
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.94 E-value=1.4e-05 Score=72.85 Aligned_cols=122 Identities=11% Similarity=0.127 Sum_probs=77.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcccee--ecCh
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA--GVFP 247 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a--~~~P 247 (450)
+.+++.+.++.++. +++++|+........+.+.+|+.... +..++.+. .. ... .-.|
T Consensus 88 ~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~-~~~~~~~~------------~~-----~~~~~kpk~ 146 (229)
T 2fdr_A 88 IIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYF-APHIYSAK------------DL-----GADRVKPKP 146 (229)
T ss_dssp BCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGT-TTCEEEHH------------HH-----CTTCCTTSS
T ss_pred cCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhc-cceEEecc------------cc-----ccCCCCcCH
Confidence 56788888877764 89999999998888888888874210 00000000 00 000 0112
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCee-EEeccchH-------HHhhc-cCEEecCCCchHHHHHHH
Q 013069 248 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADATD-------AARSA-ADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 248 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvG-Ia~~~~~~-------~a~~a-aDivl~~~~l~~i~~~I~ 314 (450)
+--..+++.+.-....|++|||+.||++|++.|+++ |+++++.. ..++. +|+++. ++..+..++.
T Consensus 147 ~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~--~~~el~~~l~ 220 (229)
T 2fdr_A 147 DIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVIS--RMQDLPAVIA 220 (229)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEES--CGGGHHHHHH
T ss_pred HHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeec--CHHHHHHHHH
Confidence 222334455544456799999999999999999998 66765433 35666 999985 4666666553
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.94 E-value=1.2e-05 Score=72.33 Aligned_cols=121 Identities=11% Similarity=0.120 Sum_probs=80.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.+ ++.|++. +++.++|+.....+..+.+.+|+.... ..++.+.+. ....-.|+
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~~ 132 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYF--KGIFSAESV-----------------KEYKPSPK 132 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGG-----------------TCCTTCHH
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhC--cEEEehhhc-----------------CCCCCCHH
Confidence 46789999 9999999 999999999988888888889874211 001110000 01111233
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEec----cchHHHhhccCEEecCCCchHHHHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA----DATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~----~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
--..+++.+. ...++||||+.||+.|.+.|+++..+- +..+.....+|+++. ++..+..++.
T Consensus 133 ~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l~ 198 (201)
T 2w43_A 133 VYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVN--DFKELYEWIL 198 (201)
T ss_dssp HHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEES--SHHHHHHHHH
T ss_pred HHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEEC--CHHHHHHHHH
Confidence 3344555555 567999999999999999999997762 222233446888874 4666665553
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.89 E-value=9.6e-06 Score=73.88 Aligned_cols=115 Identities=11% Similarity=0.089 Sum_probs=77.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.|++.+.++.|++ |+++.++|+.....+..+.+.+|+..-. ..+ +.+...+.
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f--~~i-----------------------~~~~~~~K 137 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFF--DGI-----------------------YGSSPEAP 137 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGC--SEE-----------------------EEECSSCC
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhe--eee-----------------------ecCCCCCC
Confidence 367999999999999 9999999999888888888888884210 000 11111122
Q ss_pred hHHHHHHHH----hhcCCEEEEecCCCCChHhHhhCCe---eEEeccc-hHHHh-hccCEEecCCCchHHHH
Q 013069 249 HKYEIVKHL----QARNHICGMIGNGVNDAPALKKADI---GIAVADA-TDAAR-SAADIVLTEPGLNVIIT 311 (450)
Q Consensus 249 ~K~~iV~~l----q~~g~~v~~iGDG~ND~~al~~Adv---GIa~~~~-~~~a~-~aaDivl~~~~l~~i~~ 311 (450)
-|.++.+.+ .-....|+||||+.||+.|.+.|++ +++++.+ .+..+ ..+|+++.+ +..+..
T Consensus 138 p~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~--~~el~~ 207 (210)
T 2ah5_A 138 HKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHK--PLEVLA 207 (210)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESS--TTHHHH
T ss_pred CChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECC--HHHHHH
Confidence 344444333 3234569999999999999999999 5555544 33333 368988854 555543
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.86 E-value=6.8e-05 Score=69.79 Aligned_cols=117 Identities=16% Similarity=0.097 Sum_probs=79.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeec--C
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV--F 246 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~--~ 246 (450)
++.+++.+.++.|+ .|+++.++|+.....+....+.+|+.... . .+++.. .
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f-~-------------------------~i~~~~kp~ 164 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLF-P-------------------------RIEVVSEKD 164 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTC-C-------------------------CEEEESCCS
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhC-c-------------------------eeeeeCCCC
Confidence 46799999999999 99999999999988888888888874210 0 011211 1
Q ss_pred hhhHHHHHHHHhhcCCEEEEecCCC-CChHhHhhCCeeEEec-cchH--------HHhhccCE-EecCCCchHHHHHHH
Q 013069 247 PEHKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIGIAVA-DATD--------AARSAADI-VLTEPGLNVIITAVL 314 (450)
Q Consensus 247 P~~K~~iV~~lq~~g~~v~~iGDG~-ND~~al~~AdvGIa~~-~~~~--------~a~~aaDi-vl~~~~l~~i~~~I~ 314 (450)
|+--..+++.+.-....|++|||+. ||+.|.+.|++++++- .+.. .....+|+ ++ +++..+..++.
T Consensus 165 ~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~~l~ 241 (251)
T 2pke_A 165 PQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREV--PDPSGWPAAVR 241 (251)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEEC--SSGGGHHHHHH
T ss_pred HHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeee--CCHHHHHHHHH
Confidence 2222344555554556799999999 9999999999998764 2211 11245787 66 34777776654
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.85 E-value=1.1e-05 Score=76.15 Aligned_cols=123 Identities=14% Similarity=0.200 Sum_probs=82.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhh
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 249 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 249 (450)
+.+++.++++.|++.|+++.++|+.... ...+.+.+|+.... ..++.+. + .....-.|+-
T Consensus 107 ~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f--~~~~~~~------------~-----~~~~Kp~~~~ 166 (263)
T 3k1z_A 107 VLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHF--DFVLTSE------------A-----AGWPKPDPRI 166 (263)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGC--SCEEEHH------------H-----HSSCTTSHHH
T ss_pred ECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhh--hEEEeec------------c-----cCCCCCCHHH
Confidence 6799999999999999999999987664 57777888874211 0000000 0 0011223333
Q ss_pred HHHHHHHHhhcCCEEEEecCCC-CChHhHhhCCeeEEeccchHH------HhhccCEEecCCCchHHHHHHH
Q 013069 250 KYEIVKHLQARNHICGMIGNGV-NDAPALKKADIGIAVADATDA------ARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 250 K~~iV~~lq~~g~~v~~iGDG~-ND~~al~~AdvGIa~~~~~~~------a~~aaDivl~~~~l~~i~~~I~ 314 (450)
-..+++.+.-....|+||||+. ||+.|.+.|++++++.+.... ....+|+++. ++..+..++.
T Consensus 167 ~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~--~l~el~~~l~ 236 (263)
T 3k1z_A 167 FQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILP--SLAHLLPALD 236 (263)
T ss_dssp HHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEES--SGGGHHHHHH
T ss_pred HHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeC--CHHHHHHHHH
Confidence 4455566655567799999997 999999999999998643221 2236888884 4777777665
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.65 E-value=5.1e-05 Score=67.91 Aligned_cols=99 Identities=12% Similarity=0.094 Sum_probs=69.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhh
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 249 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 249 (450)
+.+++.+.++.|++.| ++.++|+........+.+.+|+.... . .++.+. +. ....-.|+-
T Consensus 87 ~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f-~-~~~~~~------------~~-----~~~Kp~~~~ 146 (200)
T 3cnh_A 87 PRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFL-L-AFFTSS------------AL-----GVMKPNPAM 146 (200)
T ss_dssp BCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTC-S-CEEEHH------------HH-----SCCTTCHHH
T ss_pred cCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhc-c-eEEeec------------cc-----CCCCCCHHH
Confidence 6799999999999999 99999999998888888888874211 0 000000 00 011122333
Q ss_pred HHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEecc
Q 013069 250 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVAD 288 (450)
Q Consensus 250 K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~ 288 (450)
-..+++.+.-....|++|||+.||+.|.+.|++...+-+
T Consensus 147 ~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~ 185 (200)
T 3cnh_A 147 YRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQCV 185 (200)
T ss_dssp HHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECS
T ss_pred HHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEEC
Confidence 334555555455679999999999999999999987753
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.60 E-value=1.7e-05 Score=71.68 Aligned_cols=102 Identities=6% Similarity=0.002 Sum_probs=67.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH------hCCCCCCCCCccccCCchhhhhhcCChhHHhhhccce
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR------LGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 242 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~------lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ 242 (450)
++.+++.+.++.|++ |++++++|+........+.+. +|+.... ..++.+ ++ ...
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f--~~~~~~------------~~-----~~~ 148 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFF--DKVYAS------------CQ-----MGK 148 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGS--SEEEEH------------HH-----HTC
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHc--CeEEee------------cc-----cCC
Confidence 467899999999999 999999999888777666655 4542100 000000 00 001
Q ss_pred eecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccch
Q 013069 243 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADAT 290 (450)
Q Consensus 243 a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~ 290 (450)
..-.|+--..+++.+.-....|++|||+.||+.|.+.|+++..+.++.
T Consensus 149 ~Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~ 196 (211)
T 2i6x_A 149 YKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDNG 196 (211)
T ss_dssp CTTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCTT
T ss_pred CCCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECCH
Confidence 111222333455555545567999999999999999999999887544
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=97.60 E-value=2.6e-05 Score=73.99 Aligned_cols=63 Identities=25% Similarity=0.361 Sum_probs=51.1
Q ss_pred eecCh--hhHHHHHHHH-hhcCCEEEEecC----CCCChHhHhhCC-eeEEeccchHHHhhccCEEecCCC
Q 013069 243 AGVFP--EHKYEIVKHL-QARNHICGMIGN----GVNDAPALKKAD-IGIAVADATDAARSAADIVLTEPG 305 (450)
Q Consensus 243 a~~~P--~~K~~iV~~l-q~~g~~v~~iGD----G~ND~~al~~Ad-vGIa~~~~~~~a~~aaDivl~~~~ 305 (450)
.++.| .+|...++.| .-....|+++|| +.||.+||+.|+ +|++|+|+.+.+++.||+|+.+++
T Consensus 189 leI~~~~vsKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~~~~k~~a~~v~~~~~ 259 (262)
T 2fue_A 189 FDVFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFFPETA 259 (262)
T ss_dssp EEEEETTCSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHCTTC-
T ss_pred EEEecCCCCHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCCHHHHHhhheeCCCCc
Confidence 34444 3588888888 112467999999 999999999999 699999999999999999987654
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00031 Score=63.61 Aligned_cols=122 Identities=17% Similarity=0.113 Sum_probs=79.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhh
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 249 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 249 (450)
+.|++.++++.|++.|+++.++|+.....+....+.+|+..-. + .++...+ .....-.|+-
T Consensus 85 ~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~f-d-~~~~~~~-----------------~~~~KP~p~~ 145 (216)
T 3kbb_A 85 ENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYF-D-VMVFGDQ-----------------VKNGKPDPEI 145 (216)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC-S-EEECGGG-----------------SSSCTTSTHH
T ss_pred cCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccc-c-ccccccc-----------------cCCCcccHHH
Confidence 5789999999999999999999999999999999999985211 0 0000000 0011222333
Q ss_pred HHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeE--Ee--c-cchHHHhhc-cCEEecCCCchHHHHHH
Q 013069 250 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI--AV--A-DATDAARSA-ADIVLTEPGLNVIITAV 313 (450)
Q Consensus 250 K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGI--a~--~-~~~~~a~~a-aDivl~~~~l~~i~~~I 313 (450)
=..+++.+.-....|+||||+.+|+.+-+.|++.. ++ + +..+...++ ++.+. + ...++..+
T Consensus 146 ~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~-~--~~eli~~l 212 (216)
T 3kbb_A 146 YLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALV-K--PEEILNVL 212 (216)
T ss_dssp HHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEE-C--GGGHHHHH
T ss_pred HHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEEC-C--HHHHHHHH
Confidence 34455666555667999999999999999999853 23 2 333444444 44444 3 34455444
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00037 Score=65.80 Aligned_cols=123 Identities=10% Similarity=0.117 Sum_probs=80.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.|++.++++.|++ |+++.++|+.....+..+.+.+|+..-. ..++.+.+. ....-.|+
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f--~~i~~~~~~-----------------~~~KP~p~ 180 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYF--DAIVIGGEQ-----------------KEEKPAPS 180 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGC--SEEEEGGGS-----------------SSCTTCHH
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhh--heEEecCCC-----------------CCCCCCHH
Confidence 467999999999998 6999999999998888888999985211 001110000 01111232
Q ss_pred hHHHHHHHHhhcCCEEEEecCC-CCChHhHhhCCe--eEEeccchH---HHhhccCEEecCCCchHHHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNG-VNDAPALKKADI--GIAVADATD---AARSAADIVLTEPGLNVIITAV 313 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG-~ND~~al~~Adv--GIa~~~~~~---~a~~aaDivl~~~~l~~i~~~I 313 (450)
--..+++.+.-....|+||||+ .||+.+-+.|++ .|.+..+.. .....+|+++.+ +..+..++
T Consensus 181 ~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~~--~~el~~~l 249 (260)
T 2gfh_A 181 IFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSS--VLELPALL 249 (260)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESS--GGGHHHHH
T ss_pred HHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEECC--HHHHHHHH
Confidence 2334455555445679999995 999999999999 577753221 123457888754 67666655
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=97.42 E-value=2.7e-05 Score=73.04 Aligned_cols=52 Identities=19% Similarity=0.285 Sum_probs=43.1
Q ss_pred hHHHHHHHH-hhcCCEEEEecC----CCCChHhHhhCCe-eEEeccchHHHhhccCEE
Q 013069 249 HKYEIVKHL-QARNHICGMIGN----GVNDAPALKKADI-GIAVADATDAARSAADIV 300 (450)
Q Consensus 249 ~K~~iV~~l-q~~g~~v~~iGD----G~ND~~al~~Adv-GIa~~~~~~~a~~aaDiv 300 (450)
+|...++.| .-....|+++|| |.||.+||+.|+. |++|+|+.+.+++.||+|
T Consensus 188 ~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~vk~~A~~v 245 (246)
T 2amy_A 188 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICELLF 245 (246)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHHHHHHHC
T ss_pred chHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHHHHHHHhhc
Confidence 688877777 112467999999 9999999999988 999999999999999986
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=97.36 E-value=6.2e-05 Score=69.15 Aligned_cols=108 Identities=16% Similarity=0.009 Sum_probs=64.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcH---------------HHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCCh
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQL---------------AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPV 232 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~---------------~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~ 232 (450)
.++.+++.++|+.|++.|+++.++|+... ..+..+.+.+|+.-. .........+..+.
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~---~~~~~~~~~~g~~~---- 127 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVD---MVLACAYHEAGVGP---- 127 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCS---EEEEECCCTTCCST----
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCcee---eEEEeecCCCCcee----
Confidence 46789999999999999999999999987 677778888887411 00000000000000
Q ss_pred hHHhhhccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeE
Q 013069 233 DELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 284 (450)
Q Consensus 233 ~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGI 284 (450)
+. .....+..-.|.-=..+.+.+.-....++||||+.||+.+.+.|++..
T Consensus 128 -~~-~~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~ 177 (218)
T 2o2x_A 128 -LA-IPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQ 177 (218)
T ss_dssp -TC-CSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSE
T ss_pred -ec-ccCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCE
Confidence 00 000000111111112334444434456999999999999999999864
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00036 Score=63.42 Aligned_cols=118 Identities=17% Similarity=0.201 Sum_probs=72.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.++++.|++. +++.++|+.... .+.+|+.... ..++.. +. .....-.|+
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f--~~~~~~------------~~-----~~~~kp~~~ 159 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYF--AFALCA------------ED-----LGIGKPDPA 159 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGC--SEEEEH------------HH-----HTCCTTSHH
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHe--eeeEEc------------cc-----cCCCCcCHH
Confidence 3678999999999998 999999987654 2233432100 000000 00 000111222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCC-CChHhHhhCCeeEEec----cchHHHhhccCEEecCCCchHHHHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIGIAVA----DATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~-ND~~al~~AdvGIa~~----~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
--..+.+.+.-....|+||||+. ||+.|.+.|+++.++- +..+. ...+|+++.+ +..+..++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~~~--l~el~~~l~ 227 (230)
T 3vay_A 160 PFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEIHN--LSQLPEVLA 227 (230)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEESS--GGGHHHHHH
T ss_pred HHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeECC--HHHHHHHHH
Confidence 22344555544456799999998 9999999999998872 22222 5678988854 777777664
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.33 E-value=9.9e-05 Score=61.67 Aligned_cols=98 Identities=11% Similarity=0.081 Sum_probs=64.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+.... ..++... + .....-.|+
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~~~~------------~-----~~~~Kp~~~ 78 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVV--DKVLLSG------------E-----LGVEKPEEA 78 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSS--SEEEEHH------------H-----HSCCTTSHH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhc--cEEEEec------------c-----CCCCCCCHH
Confidence 36688999999999999999999999888877777888764211 0000000 0 001112232
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEE
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 285 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa 285 (450)
--..+++.+......++||||+.+|+.+.+.+++...
T Consensus 79 ~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~i 115 (137)
T 2pr7_A 79 AFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGV 115 (137)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEEE
Confidence 2333445544444569999999999999999997543
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=97.31 E-value=2.2e-05 Score=70.55 Aligned_cols=105 Identities=5% Similarity=-0.008 Sum_probs=63.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH-hCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecCh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR-LGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 247 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~-lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 247 (450)
++.+++.+.++.|++.|++++++|+........+... +|+.... ..++.+ ++. ....-.|
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f--~~~~~~------------~~~-----~~~Kp~~ 151 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAA--DHIYLS------------QDL-----GMRKPEA 151 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHC--SEEEEH------------HHH-----TCCTTCH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhhe--eeEEEe------------ccc-----CCCCCCH
Confidence 4679999999999999999999998665432222111 2211000 000000 000 0111123
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHH
Q 013069 248 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDA 292 (450)
Q Consensus 248 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~ 292 (450)
+--..+++.+.-....+++|||+.||+.|.+.|++...+.+..+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~ 196 (206)
T 2b0c_A 152 RIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKTT 196 (206)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTTH
T ss_pred HHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEecCCch
Confidence 333445555555556799999999999999999999877654433
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0013 Score=61.83 Aligned_cols=41 Identities=12% Similarity=0.139 Sum_probs=34.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcC---CcHHHHHHHHHHhCCC
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITG---DQLAIAKETGRRLGMG 209 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTG---D~~~~a~~ia~~lgi~ 209 (450)
.+-++++++|++|+++|++++++|| ..........+.+|+.
T Consensus 22 ~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~ 65 (266)
T 3pdw_A 22 EKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIP 65 (266)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCC
T ss_pred EeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 3446899999999999999999988 6677777777888885
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00098 Score=60.32 Aligned_cols=95 Identities=11% Similarity=0.034 Sum_probs=60.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.++++.|++.|+++.++||.....+..+.. . +...++.+.+. ....-.|+
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~---~----~~d~v~~~~~~-----------------~~~KP~p~ 91 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA---P----VNDWMIAAPRP-----------------TAGWPQPD 91 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT---T----TTTTCEECCCC-----------------SSCTTSTH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC---c----cCCEEEECCcC-----------------CCCCCChH
Confidence 567999999999999999999999998877754443 1 00111111100 01111222
Q ss_pred hHHHHHHHHhhc-CCEEEEecCCCCChHhHhhCCee-EEec
Q 013069 249 HKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIG-IAVA 287 (450)
Q Consensus 249 ~K~~iV~~lq~~-g~~v~~iGDG~ND~~al~~AdvG-Ia~~ 287 (450)
-=...++.+.-. ...|+||||..+|+.+-+.|++- |++.
T Consensus 92 ~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~ 132 (196)
T 2oda_A 92 ACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLA 132 (196)
T ss_dssp HHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEES
T ss_pred HHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEc
Confidence 223344444433 25699999999999999999974 5554
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00021 Score=65.47 Aligned_cols=106 Identities=8% Similarity=-0.056 Sum_probs=68.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHh------CCCCCCCCCccccCCchhhhhhcCChhHHhhhccce
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL------GMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 242 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~l------gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ 242 (450)
++.|++.++++.|++. +++.++|+........+.+.+ |+.... ..++.. ++ ...
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~f--d~i~~~------------~~-----~~~ 171 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYF--EKTYLS------------YE-----MKM 171 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHC--SEEEEH------------HH-----HTC
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhC--CEEEee------------cc-----cCC
Confidence 3669999999999998 999999999988877666433 331000 000000 00 001
Q ss_pred eecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHh
Q 013069 243 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAAR 294 (450)
Q Consensus 243 a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~ 294 (450)
..-.|+-=..+++.+.-....|++|||+.||+.|.+.|+++..+.++.+..+
T Consensus 172 ~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~~k 223 (229)
T 4dcc_A 172 AKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAGEDWS 223 (229)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCCGG
T ss_pred CCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCHHHHH
Confidence 1222333345556665556679999999999999999999988876544443
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00039 Score=65.50 Aligned_cols=43 Identities=21% Similarity=0.334 Sum_probs=35.7
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcC---CcHHHHHHHHHHhCCC
Q 013069 167 FDPPIHDSAETIRRALSLGLGVKMITG---DQLAIAKETGRRLGMG 209 (450)
Q Consensus 167 ~D~lr~~~~~~I~~l~~~Gi~v~mlTG---D~~~~a~~ia~~lgi~ 209 (450)
.+.+-+++.++|++|++.|++++++|| ..........+.+|+.
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~ 67 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLE 67 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCC
Confidence 445567899999999999999999999 6666666777788875
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00048 Score=65.40 Aligned_cols=85 Identities=15% Similarity=0.066 Sum_probs=63.7
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcH----HHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccce
Q 013069 167 FDPPIHDSAETIRRALSLGLGVKMITGDQL----AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 242 (450)
Q Consensus 167 ~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~----~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ 242 (450)
..++.|++.+.|+.|++.|+++.++||... ..+..-.+.+||..-.-. .++
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~-------------------------~Li 153 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDK-------------------------TLL 153 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTT-------------------------TEE
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccc-------------------------eeE
Confidence 356889999999999999999999999975 477777788999631000 122
Q ss_pred eecChhhHHHHHHHHhhc-CCEEEEecCCCCChHh
Q 013069 243 AGVFPEHKYEIVKHLQAR-NHICGMIGNGVNDAPA 276 (450)
Q Consensus 243 a~~~P~~K~~iV~~lq~~-g~~v~~iGDG~ND~~a 276 (450)
.+-....|....+.+.+. ..+|+++||..+|.++
T Consensus 154 lr~~~~~K~~~r~~L~~~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 154 LKKDKSNKSVRFKQVEDMGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp EESSCSSSHHHHHHHHTTTCEEEEEEESSGGGGCG
T ss_pred ecCCCCChHHHHHHHHhcCCCEEEEECCChHHcCc
Confidence 222345678888888774 5679999999999986
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00086 Score=67.39 Aligned_cols=137 Identities=13% Similarity=0.128 Sum_probs=80.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCC-ccccCCchhhhhhcCChhHHhhhccceeecCh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPS-SALSGQDRDESIVALPVDELIEKADGFAGVFP 247 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 247 (450)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+... ... .++.+.+....- +..........-.|
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~-Fd~~~Ivs~ddv~~~~------~~~~~~kp~~KP~P 287 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPY-FEADFIATASDVLEAE------NMYPQARPLGKPNP 287 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGG-SCGGGEECHHHHHHHH------HHSTTSCCCCTTST
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHh-cCCCEEEecccccccc------cccccccCCCCCCH
Confidence 5789999999999999999999999999999999899998532 110 122211110000 00000000011112
Q ss_pred hhHHHHHHHHh--------------hcCCEEEEecCCCCChHhHhhCCee-EEeccc------hHHH-hhccCEEecCCC
Q 013069 248 EHKYEIVKHLQ--------------ARNHICGMIGNGVNDAPALKKADIG-IAVADA------TDAA-RSAADIVLTEPG 305 (450)
Q Consensus 248 ~~K~~iV~~lq--------------~~g~~v~~iGDG~ND~~al~~AdvG-Ia~~~~------~~~a-~~aaDivl~~~~ 305 (450)
+-=..+.+.+. -....|+||||+.+|+.+-++|++. |++..+ .+.. ...+|+++.+
T Consensus 288 ~~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi~s-- 365 (384)
T 1qyi_A 288 FSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINH-- 365 (384)
T ss_dssp HHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESS--
T ss_pred HHHHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEECC--
Confidence 11112222222 1235699999999999999999986 444432 1222 2468988854
Q ss_pred chHHHHHHH
Q 013069 306 LNVIITAVL 314 (450)
Q Consensus 306 l~~i~~~I~ 314 (450)
+..+..++.
T Consensus 366 l~eL~~~l~ 374 (384)
T 1qyi_A 366 LGELRGVLD 374 (384)
T ss_dssp GGGHHHHHS
T ss_pred HHHHHHHHH
Confidence 777766553
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=96.92 E-value=0.00062 Score=64.69 Aligned_cols=85 Identities=13% Similarity=0.053 Sum_probs=62.5
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcH----HHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccce
Q 013069 167 FDPPIHDSAETIRRALSLGLGVKMITGDQL----AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 242 (450)
Q Consensus 167 ~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~----~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ 242 (450)
..++.|++.+.++.|++.|+++.++||... ..+..-.+.+||+.-. . ..++
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~--~-----------------------~~Li 153 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVE--E-----------------------SAFY 153 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCS--G-----------------------GGEE
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCccc--c-----------------------ccee
Confidence 356889999999999999999999999865 4667777889996210 0 0122
Q ss_pred eecChhhHHHHHHHHhhc-CCEEEEecCCCCChHh
Q 013069 243 AGVFPEHKYEIVKHLQAR-NHICGMIGNGVNDAPA 276 (450)
Q Consensus 243 a~~~P~~K~~iV~~lq~~-g~~v~~iGDG~ND~~a 276 (450)
.+-.-..|....+.+.+. ..+|++|||..+|.++
T Consensus 154 lr~~~~~K~~~r~~l~~~Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 154 LKKDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp EESSCSCCHHHHHHHHHTTEEEEEEEESSGGGGCS
T ss_pred ccCCCCChHHHHHHHHhcCCCEEEEECCChHHhcc
Confidence 222234577777777777 4579999999999974
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0021 Score=59.91 Aligned_cols=116 Identities=14% Similarity=0.144 Sum_probs=75.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.|++.+.++.|++.|+++.+.|+... +..+.+.+|+..-. ..++.+.+. ....-.|+
T Consensus 116 ~~~p~~~~ll~~Lk~~g~~i~i~~~~~~--~~~~L~~~gl~~~F--d~i~~~~~~-----------------~~~KP~p~ 174 (250)
T 4gib_A 116 DILPGIESLLIDVKSNNIKIGLSSASKN--AINVLNHLGISDKF--DFIADAGKC-----------------KNNKPHPE 174 (250)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHHTCGGGC--SEECCGGGC-----------------CSCTTSSH
T ss_pred ccchhHHHHHHHHHhcccccccccccch--hhhHhhhccccccc--ceeeccccc-----------------CCCCCcHH
Confidence 4679999999999999999988776543 55667888885211 111111000 01222333
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCe-eEEeccchHHHhhccCEEecCCCchHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVADATDAARSAADIVLTEPGLNVI 309 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~Adv-GIa~~~~~~~a~~aaDivl~~~~l~~i 309 (450)
-=..+++.+.-....|+||||..+|+.+-+.|++ .|++++..+ ...||+++.+ +..+
T Consensus 175 ~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~--~~~ad~vi~~--l~eL 232 (250)
T 4gib_A 175 IFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVGNYEN--LKKANLVVDS--TNQL 232 (250)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESCTTT--TTTSSEEESS--GGGC
T ss_pred HHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEECChhH--hccCCEEECC--hHhC
Confidence 3345566666556779999999999999999998 456654332 2458998854 5444
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0069 Score=56.13 Aligned_cols=40 Identities=28% Similarity=0.260 Sum_probs=35.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEc---CCcHHHHHHHHHHhCCC
Q 013069 170 PIHDSAETIRRALSLGLGVKMIT---GDQLAIAKETGRRLGMG 209 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlT---GD~~~~a~~ia~~lgi~ 209 (450)
+-+.+.++++.+++.|+++.++| |............+|+.
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 55788999999999999999999 99988888888888875
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0031 Score=57.25 Aligned_cols=95 Identities=9% Similarity=0.005 Sum_probs=60.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.++++.|++.|+++.++|+... .+..+.+.+|+..-. ..++.+.+. ....-.|+
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f--~~~~~~~~~-----------------~~~Kp~~~ 154 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYF--DALALSYEI-----------------KAVKPNPK 154 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGC--SEEC----------------------------CC
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHe--eEEEecccc-----------------CCCCCCHH
Confidence 3679999999999999999999999876 467788888874210 001100000 01111222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCC-ChHhHhhCCeeEEe
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVN-DAPALKKADIGIAV 286 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~N-D~~al~~AdvGIa~ 286 (450)
--..+++.+.-. . +||||+.+ |+.+-+.|++....
T Consensus 155 ~~~~~~~~~~~~--~-~~vgD~~~~Di~~a~~aG~~~i~ 190 (220)
T 2zg6_A 155 IFGFALAKVGYP--A-VHVGDIYELDYIGAKRSYVDPIL 190 (220)
T ss_dssp HHHHHHHHHCSS--E-EEEESSCCCCCCCSSSCSEEEEE
T ss_pred HHHHHHHHcCCC--e-EEEcCCchHhHHHHHHCCCeEEE
Confidence 222344444322 2 99999999 99999999998664
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=96.51 E-value=0.00052 Score=64.55 Aligned_cols=58 Identities=22% Similarity=0.265 Sum_probs=46.9
Q ss_pred eeecChh--hHHHHHHHHhhcCCEEEEecC----CCCChHhHhhCC-eeEEeccchHHHhhccCE
Q 013069 242 FAGVFPE--HKYEIVKHLQARNHICGMIGN----GVNDAPALKKAD-IGIAVADATDAARSAADI 299 (450)
Q Consensus 242 ~a~~~P~--~K~~iV~~lq~~g~~v~~iGD----G~ND~~al~~Ad-vGIa~~~~~~~a~~aaDi 299 (450)
+-++.|. +|...++.|.+....|+++|| |.||.+||+.|+ +|++|+|+.+.++....+
T Consensus 178 ~leI~~~gv~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~~~~~~~~~~ 242 (246)
T 3f9r_A 178 SFDVFPVGWDKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKDTIAEVEKI 242 (246)
T ss_dssp EEEEEETTCSGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHHHHHHHHHHH
T ss_pred EEEEEeCCCCHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHHHHHHHHHHH
Confidence 4455554 688888888776678999999 799999999996 899999988888765543
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=96.50 E-value=0.0012 Score=58.59 Aligned_cols=101 Identities=9% Similarity=0.006 Sum_probs=60.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC---------------cHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGD---------------QLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVD 233 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD---------------~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~ 233 (450)
++.|++.++|+.|++.|+++.++|+. ....+..+.+.+|+. ....+..+.......
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---fd~v~~s~~~~~~~~------ 112 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ---FDEVLICPHLPADEC------ 112 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC---EEEEEEECCCGGGCC------
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC---eeEEEEcCCCCcccc------
Confidence 57899999999999999999999998 466777888888874 111111100000000
Q ss_pred HHhhhccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEE
Q 013069 234 ELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 285 (450)
Q Consensus 234 ~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa 285 (450)
....-.|+-=..+++.+.-....|+||||+.+|+.+-+.|++...
T Consensus 113 -------~~~KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i 157 (176)
T 2fpr_A 113 -------DCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGL 157 (176)
T ss_dssp -------SSSTTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEE
T ss_pred -------cccCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEE
Confidence 000001100011122233334568999999999999999998643
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0074 Score=56.55 Aligned_cols=42 Identities=14% Similarity=0.035 Sum_probs=36.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEc---CCcHHHHHHHHHHhCCC
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMIT---GDQLAIAKETGRRLGMG 209 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlT---GD~~~~a~~ia~~lgi~ 209 (450)
.++-+++.++|++|++.|++++++| |..........+.+|+.
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 5567889999999999999999999 88888888888888875
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0067 Score=55.54 Aligned_cols=113 Identities=11% Similarity=0.121 Sum_probs=72.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.|++.++++.|++.| ++.++|+.....+..+.+.+|+... +.. .+.. ..
T Consensus 96 ~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~------------------------f~~-~~~~---~~ 146 (231)
T 2p11_A 96 RVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDE------------------------VEG-RVLI---YI 146 (231)
T ss_dssp GBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHH------------------------TTT-CEEE---ES
T ss_pred CcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHh------------------------cCe-eEEe---cC
Confidence 57899999999999999 9999999998888888888887410 000 0011 11
Q ss_pred hHHHHHHHHh--hcCCEEEEecCCCC---ChHhHhhCCee-EEeccc-----hHHHhhc--cCEEecCCCchHHHHH
Q 013069 249 HKYEIVKHLQ--ARNHICGMIGNGVN---DAPALKKADIG-IAVADA-----TDAARSA--ADIVLTEPGLNVIITA 312 (450)
Q Consensus 249 ~K~~iV~~lq--~~g~~v~~iGDG~N---D~~al~~AdvG-Ia~~~~-----~~~a~~a--aDivl~~~~l~~i~~~ 312 (450)
.|..+++.+. -....|+||||+.+ |+.+-+.|++. |.+..+ .+..... +|+++.+ +..+..+
T Consensus 147 ~K~~~~~~~~~~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~~--~~el~~~ 221 (231)
T 2p11_A 147 HKELMLDQVMECYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVER--IGDLVEM 221 (231)
T ss_dssp SGGGCHHHHHHHSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEESS--GGGGGGC
T ss_pred ChHHHHHHHHhcCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeecC--HHHHHHH
Confidence 2322333322 24568999999999 66666778865 333322 2233333 8888854 5555443
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0016 Score=62.55 Aligned_cols=97 Identities=11% Similarity=-0.016 Sum_probs=66.6
Q ss_pred CCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHH---HHHHHH--------hCCCCCCCCCccccCCchhhhhhcCChhH
Q 013069 166 LFDPPIHDSAETIRRALSLGLGVKMITGDQLAIA---KETGRR--------LGMGTNMYPSSALSGQDRDESIVALPVDE 234 (450)
Q Consensus 166 l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a---~~ia~~--------lgi~~~~~~~~~l~~~~~~~~~~~~~~~~ 234 (450)
.++++.+++.++++.|++.|+++.++||.....+ ...-+. +|+. +. .++.+.+.
T Consensus 185 ~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~---~~-~~~~~~~~----------- 249 (301)
T 1ltq_A 185 DTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVP---LV-MQCQREQG----------- 249 (301)
T ss_dssp GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCC---CS-EEEECCTT-----------
T ss_pred cccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCC---ch-heeeccCC-----------
Confidence 3577899999999999999999999999985432 333334 6762 11 11111100
Q ss_pred HhhhccceeecChhhHHHHHHHHhhcC-CEEEEecCCCCChHhHhhCCeeE
Q 013069 235 LIEKADGFAGVFPEHKYEIVKHLQARN-HICGMIGNGVNDAPALKKADIGI 284 (450)
Q Consensus 235 ~~~~~~v~a~~~P~~K~~iV~~lq~~g-~~v~~iGDG~ND~~al~~AdvGI 284 (450)
..+-.|+-|..+++.+.... ..++||||..+|+.|-+.|++..
T Consensus 250 -------~~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~ 293 (301)
T 1ltq_A 250 -------DTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVEC 293 (301)
T ss_dssp -------CCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCE
T ss_pred -------CCcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeE
Confidence 01223666777777775444 45789999999999999999863
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=96.28 E-value=0.0055 Score=57.53 Aligned_cols=41 Identities=17% Similarity=0.131 Sum_probs=35.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEc---CCcHHHHHHHHHHhCCCC
Q 013069 169 PPIHDSAETIRRALSLGLGVKMIT---GDQLAIAKETGRRLGMGT 210 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlT---GD~~~~a~~ia~~lgi~~ 210 (450)
++ +++.++|++++++|++++++| |..........+.+|+..
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~ 65 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVET 65 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCC
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 35 899999999999999999999 788888888888888853
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=96.11 E-value=0.006 Score=55.55 Aligned_cols=54 Identities=11% Similarity=0.080 Sum_probs=36.7
Q ss_pred HHHHHHHHhh----cCCEEEEecCC-CCChHhHhhCCeeEEe---ccch-HHHh---hccCEEecC
Q 013069 250 KYEIVKHLQA----RNHICGMIGNG-VNDAPALKKADIGIAV---ADAT-DAAR---SAADIVLTE 303 (450)
Q Consensus 250 K~~iV~~lq~----~g~~v~~iGDG-~ND~~al~~AdvGIa~---~~~~-~~a~---~aaDivl~~ 303 (450)
|...++.+.+ ....|+||||+ .||+.|++.|++++++ ++.. +..+ ..+|+++.+
T Consensus 178 k~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~ 243 (250)
T 2c4n_A 178 SPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPS 243 (250)
T ss_dssp STHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESS
T ss_pred CHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECC
Confidence 4454444433 34569999999 6999999999999664 3332 3333 468888754
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=96.07 E-value=0.0063 Score=57.65 Aligned_cols=42 Identities=14% Similarity=0.207 Sum_probs=34.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcH---HHHHHHHHHhCCC
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQL---AIAKETGRRLGMG 209 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~---~~a~~ia~~lgi~ 209 (450)
.++.|++.++|+.|++.|+++.++||... .......+.+|+.
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 45789999999999999999999999983 4445555777885
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=95.71 E-value=0.0092 Score=58.55 Aligned_cols=120 Identities=10% Similarity=0.045 Sum_probs=69.6
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHh----CCCCCCC-CCccccCCch-------hhh-hhcCChh
Q 013069 167 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL----GMGTNMY-PSSALSGQDR-------DES-IVALPVD 233 (450)
Q Consensus 167 ~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~l----gi~~~~~-~~~~l~~~~~-------~~~-~~~~~~~ 233 (450)
...+.++..+.++.|++.|++|+|+||-....+..+|..+ ||+.+.. .......... ... .+..-..
T Consensus 141 ~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e~ViG~~~~~~~~~~~~~~~~~~~~~dg~y~~ 220 (327)
T 4as2_A 141 PPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPENVIGVTTLLKNRKTGELTTARKQIAEGKYDP 220 (327)
T ss_dssp CCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGGGEEEECEEEECTTTCCEECHHHHHHTTCCCG
T ss_pred ccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHHHeEeeeeeeeccccccccccccccccccccc
Confidence 3457899999999999999999999999999999999875 5543211 1110000000 000 0000000
Q ss_pred HHhhhcccee-----ecChhhHHHHHHHHhhc-CCEEEEecCCC-CChHhHhh--CCeeEEe
Q 013069 234 ELIEKADGFA-----GVFPEHKYEIVKHLQAR-NHICGMIGNGV-NDAPALKK--ADIGIAV 286 (450)
Q Consensus 234 ~~~~~~~v~a-----~~~P~~K~~iV~~lq~~-g~~v~~iGDG~-ND~~al~~--AdvGIa~ 286 (450)
........-. .+.-+.|...|+..... ...+++.||+. .|.+||.. ++.|+++
T Consensus 221 ~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L 282 (327)
T 4as2_A 221 KANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHL 282 (327)
T ss_dssp GGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEE
T ss_pred cccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEE
Confidence 0000000000 12235687777766544 35689999994 79999964 4445544
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=95.54 E-value=0.015 Score=54.71 Aligned_cols=95 Identities=13% Similarity=0.074 Sum_probs=63.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHh---CCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeec
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL---GMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 245 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~l---gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~ 245 (450)
++.|++.++++.|++.|+++.++|+.....+..+-+.+ |+..-. ..++.. ++...-
T Consensus 130 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~f--d~i~~~-------------------~~~~KP 188 (261)
T 1yns_A 130 EFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELV--DGHFDT-------------------KIGHKV 188 (261)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGC--SEEECG-------------------GGCCTT
T ss_pred ccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhc--cEEEec-------------------CCCCCC
Confidence 57899999999999999999999999888777766644 342100 000000 011111
Q ss_pred ChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeE
Q 013069 246 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 284 (450)
Q Consensus 246 ~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGI 284 (450)
.|+-=..+++.+.-....|+||||..+|+.+-+.|++-.
T Consensus 189 ~p~~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~~ 227 (261)
T 1yns_A 189 ESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHV 227 (261)
T ss_dssp CHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEE
T ss_pred CHHHHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCCEE
Confidence 222223455555555567999999999999999999864
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=94.86 E-value=0.032 Score=53.53 Aligned_cols=43 Identities=16% Similarity=0.180 Sum_probs=35.1
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEc---CCcHHHHHHHHHHhCCC
Q 013069 167 FDPPIHDSAETIRRALSLGLGVKMIT---GDQLAIAKETGRRLGMG 209 (450)
Q Consensus 167 ~D~lr~~~~~~I~~l~~~Gi~v~mlT---GD~~~~a~~ia~~lgi~ 209 (450)
.+++-+++.++|++|++.|++++++| |..........+.+|+.
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 34566789999999999999999999 57777666667778775
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=94.63 E-value=0.14 Score=46.95 Aligned_cols=43 Identities=16% Similarity=0.216 Sum_probs=31.1
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEc---CCcHHHHHHHHHHhCCC
Q 013069 167 FDPPIHDSAETIRRALSLGLGVKMIT---GDQLAIAKETGRRLGMG 209 (450)
Q Consensus 167 ~D~lr~~~~~~I~~l~~~Gi~v~mlT---GD~~~~a~~ia~~lgi~ 209 (450)
.+++-+++.++++.+++.|+++.++| |............+|+.
T Consensus 21 ~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~ 66 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFE 66 (259)
T ss_dssp ---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCC
Confidence 45555788999999999999999999 55555555555566764
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=94.49 E-value=0.029 Score=51.80 Aligned_cols=109 Identities=10% Similarity=0.067 Sum_probs=69.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.|++.+.++.|++.|+++.++|+... +..+-+.+|+..-. ..++.+.+. ....-.|+
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~f--d~i~~~~~~-----------------~~~KP~p~ 153 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFF--TFCADASQL-----------------KNSKPDPE 153 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGC--SEECCGGGC-----------------SSCTTSTH
T ss_pred cccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcccc--ccccccccc-----------------cCCCCcHH
Confidence 4679999999999999999999998654 44556778874211 011111000 01112232
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCee-EEeccchHHHhhccCEEec
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADATDAARSAADIVLT 302 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvG-Ia~~~~~~~a~~aaDivl~ 302 (450)
-=..+++.+.-....|+||||..+|+.+-+.|++- |++..+. ..+|.++.
T Consensus 154 ~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~~g~----~~ad~~~~ 204 (243)
T 4g9b_A 154 IFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGL----TGAQLLLP 204 (243)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEESTTC----CSCSEEES
T ss_pred HHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCC----CcHHHhcC
Confidence 22345556655567799999999999999999974 4454332 34666554
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=93.96 E-value=0.027 Score=51.29 Aligned_cols=90 Identities=12% Similarity=0.039 Sum_probs=54.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHH----HHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeec
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKE----TGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 245 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~----ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~ 245 (450)
+.+++.+.++.|++.|+++.++|+.....+.. +....+... .+..... .....-
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i~--------~~~~~~~--------------~~~~KP 146 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPA--------TNMNPVI--------------FAGDKP 146 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCT--------TTBCCCE--------------ECCCCT
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCccc--------cccchhh--------------hcCCCC
Confidence 46789999999999999999999987543222 222222210 0000000 000112
Q ss_pred ChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEE
Q 013069 246 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 285 (450)
Q Consensus 246 ~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa 285 (450)
.|+-...+++.+ |- ++||||..+|+.+-+.|++...
T Consensus 147 ~p~~~~~~~~~~---g~-~l~VGDs~~Di~aA~~aG~~~i 182 (211)
T 2b82_A 147 GQNTKSQWLQDK---NI-RIFYGDSDNDITAARDVGARGI 182 (211)
T ss_dssp TCCCSHHHHHHT---TE-EEEEESSHHHHHHHHHTTCEEE
T ss_pred CHHHHHHHHHHC---CC-EEEEECCHHHHHHHHHCCCeEE
Confidence 233333444443 43 9999999999999999998633
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=93.75 E-value=0.088 Score=53.56 Aligned_cols=98 Identities=6% Similarity=-0.013 Sum_probs=59.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC------cHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccce
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGD------QLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 242 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD------~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ 242 (450)
++.+++.++++.|++.|+++.++|+- .......... |+... . ..++.+.+. ..
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~--~l~~~-f-d~i~~~~~~-----------------~~ 158 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMC--ELKMH-F-DFLIESCQV-----------------GM 158 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHH--HHHTT-S-SEEEEHHHH-----------------TC
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhh--hhhhh-e-eEEEecccc-----------------CC
Confidence 47899999999999999999999996 2222222111 22110 0 001110000 01
Q ss_pred eecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEec
Q 013069 243 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA 287 (450)
Q Consensus 243 a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~ 287 (450)
..-.|+-=..+++.+.-....|+||||+.||+.+.+.|++....-
T Consensus 159 ~KP~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~ 203 (555)
T 3i28_A 159 VKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILV 203 (555)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEC
T ss_pred CCCCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEE
Confidence 122233334455556555667999999999999999999987664
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=93.20 E-value=0.0024 Score=57.03 Aligned_cols=40 Identities=20% Similarity=0.248 Sum_probs=33.9
Q ss_pred CCCcchHHHHHHHHhC-CCeEEEEcCCcHHHHHHHHHHhCC
Q 013069 169 PPIHDSAETIRRALSL-GLGVKMITGDQLAIAKETGRRLGM 208 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~-Gi~v~mlTGD~~~~a~~ia~~lgi 208 (450)
++.|++.++++.|++. |+++.++|+.....+..+.+.+|+
T Consensus 73 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl 113 (193)
T 2i7d_A 73 EPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW 113 (193)
T ss_dssp CBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH
T ss_pred ccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc
Confidence 5789999999999999 999999999887766666666654
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=91.78 E-value=0.14 Score=51.67 Aligned_cols=40 Identities=10% Similarity=0.150 Sum_probs=33.3
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCc------------HHHHHHHHHHhCCC
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQ------------LAIAKETGRRLGMG 209 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~------------~~~a~~ia~~lgi~ 209 (450)
+-+++.++|+.|++.|+++.++|+.. ...+..+.+.+|+.
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~ 139 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP 139 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC
Confidence 67999999999999999999999965 22366777888874
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=90.77 E-value=0.25 Score=42.12 Aligned_cols=40 Identities=20% Similarity=0.080 Sum_probs=33.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCc---HHHHHHHHHHhCCC
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQ---LAIAKETGRRLGMG 209 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~---~~~a~~ia~~lgi~ 209 (450)
+-+++.++|++|++.|+.++++||++ ...+....++.|+.
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 34689999999999999999999997 56666777778875
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=90.76 E-value=0.26 Score=46.10 Aligned_cols=102 Identities=14% Similarity=0.078 Sum_probs=59.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHh--CCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecC
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL--GMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 246 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~l--gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 246 (450)
++.|++.++++. |+++.++|..+...+..+-+.+ |.... ...+ +....+... ++..+. -..-.
T Consensus 125 ~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~---~~~l---~l~~~~~~~-f~~~~~----g~KP~ 189 (253)
T 2g80_A 125 PVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPA---HDSL---DLNSYIDGY-FDINTS----GKKTE 189 (253)
T ss_dssp CCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTT---SCCB---CCGGGCCEE-ECHHHH----CCTTC
T ss_pred CCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhccccccc---cccc---chHhhcceE-Eeeecc----CCCCC
Confidence 567899888887 9999999999998877776665 30000 0000 000000000 000000 01122
Q ss_pred hhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEE
Q 013069 247 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 285 (450)
Q Consensus 247 P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa 285 (450)
|+-=..+++.+.-....|+||||..+|+.+-++|++-..
T Consensus 190 p~~~~~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~i 228 (253)
T 2g80_A 190 TQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATG 228 (253)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEE
Confidence 322234455555555679999999999999999998643
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=90.63 E-value=0.46 Score=43.84 Aligned_cols=51 Identities=18% Similarity=0.236 Sum_probs=33.5
Q ss_pred HHHHHhhcCCEEEEecCC-CCChHhHhhCCee-EEec--cchH-HHhh---ccCEEecC
Q 013069 253 IVKHLQARNHICGMIGNG-VNDAPALKKADIG-IAVA--DATD-AARS---AADIVLTE 303 (450)
Q Consensus 253 iV~~lq~~g~~v~~iGDG-~ND~~al~~AdvG-Ia~~--~~~~-~a~~---aaDivl~~ 303 (450)
+.+.+.-....++||||+ .||+.+.+.|++. |.+. .+.. ..+. .+|+++.+
T Consensus 192 ~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~~ 250 (264)
T 1yv9_A 192 AIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDS 250 (264)
T ss_dssp HHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESS
T ss_pred HHHHcCCCHHHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEec
Confidence 344444345679999999 5999999999987 3343 2221 2222 58888754
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=90.14 E-value=0.006 Score=54.68 Aligned_cols=40 Identities=15% Similarity=0.145 Sum_probs=33.2
Q ss_pred CCCcchHHHHHHHHhC-CCeEEEEcCCcHHHHHHHHHHhCC
Q 013069 169 PPIHDSAETIRRALSL-GLGVKMITGDQLAIAKETGRRLGM 208 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~-Gi~v~mlTGD~~~~a~~ia~~lgi 208 (450)
++.+++.++++.|++. |+++.++|+.....+....+.+|+
T Consensus 75 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l 115 (197)
T 1q92_A 75 EPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAW 115 (197)
T ss_dssp CBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHH
T ss_pred CcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhch
Confidence 5789999999999999 999999999887665555555555
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=89.50 E-value=0.094 Score=51.80 Aligned_cols=48 Identities=13% Similarity=0.144 Sum_probs=37.4
Q ss_pred EeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCc----HHHHHHHHHHhCCC
Q 013069 162 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQ----LAIAKETGRRLGMG 209 (450)
Q Consensus 162 G~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~----~~~a~~ia~~lgi~ 209 (450)
|++.-.+.+-+++.++|+.|++.|++++++|+.. ...+..+.+.+|+.
T Consensus 22 Gvl~~g~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~ 73 (352)
T 3kc2_A 22 GVLFRGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVD 73 (352)
T ss_dssp TTTEETTEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSC
T ss_pred CeeEcCCeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCC
Confidence 4444456667899999999999999999999875 34555666678885
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=87.25 E-value=0.64 Score=40.29 Aligned_cols=25 Identities=8% Similarity=0.151 Sum_probs=22.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGD 194 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD 194 (450)
++.|++.++++.|++ ++++.++|+-
T Consensus 69 ~~~pg~~e~L~~L~~-~~~~~i~T~~ 93 (180)
T 3bwv_A 69 DVMPHAQEVVKQLNE-HYDIYIATAA 93 (180)
T ss_dssp CBCTTHHHHHHHHTT-TSEEEEEECC
T ss_pred CCCcCHHHHHHHHHh-cCCEEEEeCC
Confidence 578999999999998 5999999997
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.93 E-value=0.15 Score=46.00 Aligned_cols=90 Identities=13% Similarity=0.031 Sum_probs=62.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
.+||++.+.++.|++. +++.+.|.-....|..+.+.+++..- + ..++.+. -...
T Consensus 68 ~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~~-f-~~~l~rd-----------------------~~~~ 121 (195)
T 2hhl_A 68 LKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWGV-F-RARLFRE-----------------------SCVF 121 (195)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSSC-E-EEEECGG-----------------------GCEE
T ss_pred EeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCccc-E-EEEEEcc-----------------------ccee
Confidence 4799999999999998 99999999999999999999998531 1 1111111 0011
Q ss_pred hHHHHHHHHhhc---CCEEEEecCCCCChHhHhhCCeeE
Q 013069 249 HKYEIVKHLQAR---NHICGMIGNGVNDAPALKKADIGI 284 (450)
Q Consensus 249 ~K~~iV~~lq~~---g~~v~~iGDG~ND~~al~~AdvGI 284 (450)
.|..+++.+... -..|++|+|..++..+=..+++-|
T Consensus 122 ~k~~~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i 160 (195)
T 2hhl_A 122 HRGNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPV 160 (195)
T ss_dssp ETTEEECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEEC
T ss_pred cCCceeeeHhHhCCChhHEEEEECCHHHhhhCccCccEE
Confidence 122223333333 356999999999998777776655
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=85.97 E-value=0.12 Score=45.98 Aligned_cols=90 Identities=13% Similarity=0.045 Sum_probs=61.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
.+||++.+.++.+.+. +++.+.|.-....|..+...++... .+ ...+.+.+ ...
T Consensus 55 ~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~-~f-~~~~~rd~-----------------------~~~ 108 (181)
T 2ght_A 55 LKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWG-AF-RARLFRES-----------------------CVF 108 (181)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTC-CE-EEEECGGG-----------------------SEE
T ss_pred EeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCC-cE-EEEEeccC-----------------------cee
Confidence 4799999999999997 9999999999999999999998852 11 11111100 000
Q ss_pred hHHHHHHHHhhc---CCEEEEecCCCCChHhHhhCCeeE
Q 013069 249 HKYEIVKHLQAR---NHICGMIGNGVNDAPALKKADIGI 284 (450)
Q Consensus 249 ~K~~iV~~lq~~---g~~v~~iGDG~ND~~al~~AdvGI 284 (450)
.|..+++.+... -..|++|||..++..+=..+++-|
T Consensus 109 ~k~~~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i 147 (181)
T 2ght_A 109 HRGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPV 147 (181)
T ss_dssp ETTEEECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCC
T ss_pred cCCcEeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEe
Confidence 122223333332 356999999999998777776665
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=81.39 E-value=1 Score=42.91 Aligned_cols=42 Identities=19% Similarity=0.153 Sum_probs=38.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHH--HHhC-CC
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG--RRLG-MG 209 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia--~~lg-i~ 209 (450)
..+-+.+.++|++|++.|+.++++||+....+..+. +.++ +.
T Consensus 44 ~~is~~~~~al~~l~~~Gi~v~iaTGR~~~~~~~~~~~~~l~~~~ 88 (301)
T 2b30_A 44 IKVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLKKMN 88 (301)
T ss_dssp TCSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHHHHHT
T ss_pred CccCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHhhHHhhcccc
Confidence 347788999999999999999999999999999999 8888 74
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=80.15 E-value=2.2 Score=39.57 Aligned_cols=41 Identities=17% Similarity=0.098 Sum_probs=37.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 210 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~ 210 (450)
.+.+.+.++|++ ++.|++++++||+....+..+.+.+|+..
T Consensus 19 ~i~~~~~~al~~-~~~Gi~v~iaTGR~~~~~~~~~~~l~~~~ 59 (268)
T 1nf2_A 19 EISEKDRRNIEK-LSRKCYVVFASGRMLVSTLNVEKKYFKRT 59 (268)
T ss_dssp CCCHHHHHHHHH-HTTTSEEEEECSSCHHHHHHHHHHHSSSC
T ss_pred ccCHHHHHHHHH-HhCCCEEEEECCCChHHHHHHHHHhCCCC
Confidence 466789999999 99999999999999999999999999853
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 450 | ||||
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 1e-28 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 4e-26 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 4e-19 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 3e-12 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 6e-09 | |
| d1k1ea_ | 177 | c.108.1.5 (A:) Probable phosphatase YrbI {Haemophi | 3e-08 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 7e-08 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 1e-07 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 1e-07 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 3e-07 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 4e-07 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 9e-07 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 1e-06 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 2e-05 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 2e-05 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 3e-05 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 3e-05 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 4e-05 | |
| d1s2oa1 | 244 | c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 { | 0.003 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 108 bits (271), Expect = 1e-28
Identities = 55/156 (35%), Positives = 81/156 (51%), Gaps = 1/156 (0%)
Query: 159 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGM-GTNMYPSSA 217
DPP + +I+ G+ V MITGD A RR+G+ G N +
Sbjct: 10 TGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADR 69
Query: 218 LSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPAL 277
+ + E +A FA V P HK +IV++LQ+ + I M G+GVNDAPAL
Sbjct: 70 AYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPAL 129
Query: 278 KKADIGIAVADATDAARSAADIVLTEPGLNVIITAV 313
KKA+IGIA+ T A++A+++VL + + I+ AV
Sbjct: 130 KKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAV 165
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 106 bits (266), Expect = 4e-26
Identities = 27/331 (8%), Positives = 85/331 (25%), Gaps = 37/331 (11%)
Query: 6 VLCCDKTGTLTLNKLTV-----DKNLIEIFAGGVDAD-------TVVLMAARASQVENLD 53
+ + + + DK L ++ + G++++ + + ++ + +
Sbjct: 41 HIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIHLIDILKKLSHDE 100
Query: 54 VIDAAIVGMLADP--KEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQIL 111
+ + + ++ + L + + + + + ++
Sbjct: 101 IEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELH 160
Query: 112 NLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDP-- 169
+ + A+ + + + + K+ + + + G I
Sbjct: 161 VSDATLFSL----KGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTF-KTGYIYQEIILR 215
Query: 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQD------- 222
P+ + + G + + TG LG+ + D
Sbjct: 216 PVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENM 275
Query: 223 -RDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKAD 281
+ P A Y + ++G+ + D + +K
Sbjct: 276 YPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIG 335
Query: 282 I-GIAVA-------DATDAARSAADIVLTEP 304
I A + AD V+
Sbjct: 336 ATFIGTLTGLKGKDAAGELEAHHADYVINHL 366
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 81.3 bits (200), Expect = 4e-19
Identities = 41/155 (26%), Positives = 61/155 (39%), Gaps = 31/155 (20%)
Query: 159 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL 218
D + ++ +G+ V MITGD A+ R L + +
Sbjct: 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL-- 68
Query: 219 SGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALK 278
P K E VK LQA+ + +G+G+NDAPAL
Sbjct: 69 ----------------------------PHQKSEEVKKLQAK-EVVAFVGDGINDAPALA 99
Query: 279 KADIGIAVADATDAARSAADIVLTEPGLNVIITAV 313
+AD+GIAV +D A + DIVL L ++ A+
Sbjct: 100 QADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAI 134
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 63.3 bits (153), Expect = 3e-12
Identities = 26/148 (17%), Positives = 50/148 (33%), Gaps = 27/148 (18%)
Query: 53 DVIDAAIVGMLA----DPKEARADIQEVHFLPFDPTGKR--TALTYIDSEGKMHRVTKGS 106
D ++A++ + ++ R +V + F+ T K + D+ V KG+
Sbjct: 66 DASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGA 125
Query: 107 PEQILNLLHNKSKIGRKV----------NAVINKFAERGLRSLAVAYQEVPEGSKESSGS 156
PE+IL+ + G+++ + G R L +P G
Sbjct: 126 PERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFK 185
Query: 157 P-----------WQFIGLIPLFDPPIHD 173
F+GL+ + D H
Sbjct: 186 FDTDELNFPTEKLCFVGLMSMIDHHHHH 213
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 53.8 bits (128), Expect = 6e-09
Identities = 22/150 (14%), Positives = 42/150 (28%), Gaps = 6/150 (4%)
Query: 176 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDEL 235
E + + +I+G + +Y + A D
Sbjct: 82 EFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGT 141
Query: 236 IEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARS 295
+ K ++ L N MIG+ V D A K +D+ A + R
Sbjct: 142 ------CSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECRE 195
Query: 296 AADIVLTEPGLNVIITAVLISRAIFQRMRN 325
L I + + + + ++N
Sbjct: 196 QNLNHLPYQDFYEIRKEIENVKEVQEWLQN 225
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} Length = 177 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Score = 51.2 bits (122), Expect = 3e-08
Identities = 16/59 (27%), Positives = 24/59 (40%)
Query: 247 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPG 305
++++K IG+ D PA AVADA ++A D VL+ G
Sbjct: 82 ETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHG 140
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 50.8 bits (120), Expect = 7e-08
Identities = 15/68 (22%), Positives = 24/68 (35%)
Query: 246 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPG 305
+ + L + +G+G ND A K +AVA A + AD V +
Sbjct: 153 KGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEY 212
Query: 306 LNVIITAV 313
A+
Sbjct: 213 GEGGAEAI 220
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.9 bits (118), Expect = 1e-07
Identities = 31/197 (15%), Positives = 59/197 (29%), Gaps = 16/197 (8%)
Query: 111 LNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPP 170
++ L + V + + + A G A E + S +
Sbjct: 27 IDELAKICGVEDAV-SEMTRRAMGGAVPFKAALTERLALIQPSR--EQVQRLIAEQPPHL 83
Query: 171 IHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVAL 230
E + R + V +I+G +I + +L + ++ L E
Sbjct: 84 TPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGE----- 138
Query: 231 PVDELIEKADGFAGVFPEHKYEIVKHLQARNHI--CGMIGNGVNDAPALKKADIGIAVA- 287
+ K +++K L+ + H MIG+G D A AD I
Sbjct: 139 ----YAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGG 194
Query: 288 -DATDAARSAADIVLTE 303
+ A +T+
Sbjct: 195 NVIRQQVKDNAKWYITD 211
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 49.8 bits (117), Expect = 1e-07
Identities = 18/72 (25%), Positives = 27/72 (37%), Gaps = 1/72 (1%)
Query: 242 FAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVL 301
E +I K +G+G ND KKA + IA A + ADI +
Sbjct: 139 KENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICI 197
Query: 302 TEPGLNVIITAV 313
+ L I+ +
Sbjct: 198 EKRDLREILKYI 209
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 48.7 bits (115), Expect = 3e-07
Identities = 24/191 (12%), Positives = 55/191 (28%), Gaps = 33/191 (17%)
Query: 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIV 60
+A + LC D + + + G + + + + + +
Sbjct: 53 LATICALCNDSSLDFN------ETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVE 106
Query: 61 GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHR-----VTKGSPEQILNLLH 115
A R +++ L F K ++ ++ KG+PE +++ +
Sbjct: 107 RANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCN 166
Query: 116 NKSKIGRKV------------NAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQ---- 159
+V LR LA+A ++ P +E
Sbjct: 167 YVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFME 226
Query: 160 ------FIGLI 164
F+G++
Sbjct: 227 YETDLTFVGVV 237
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 48.4 bits (114), Expect = 4e-07
Identities = 32/212 (15%), Positives = 61/212 (28%), Gaps = 17/212 (8%)
Query: 113 LLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIH 172
L I K I ++GL +++ V + +
Sbjct: 14 LTDRDRLISTKAIESIRSAEKKGLT-VSLLSGNVIPVVYALKIFLGINGPVFGENGGIMF 72
Query: 173 DSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPV 232
D+ +I++ S T L + + TN + ++ E + +
Sbjct: 73 DNDGSIKKFFS-----NEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRK 127
Query: 233 DELIEKADGFAGVF-------PEHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKAD 281
+ F + E K V L+ + +IG+ ND P +
Sbjct: 128 EAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPV 187
Query: 282 IGIAVADATDAARSAADIVLTEPGLNVIITAV 313
A+ATD ++ +D V I
Sbjct: 188 RKACPANATDNIKAVSDFVSDYSYGEEIGQIF 219
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 47.2 bits (111), Expect = 9e-07
Identities = 10/58 (17%), Positives = 18/58 (31%)
Query: 246 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 303
+ K + V ++ + G+ ND L +A GI + R
Sbjct: 130 QKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVH 187
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 47.7 bits (112), Expect = 1e-06
Identities = 19/68 (27%), Positives = 29/68 (42%)
Query: 247 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGL 306
++KH N ++G+ ND L AVA+ATD+A+S A VL
Sbjct: 209 YTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHR 268
Query: 307 NVIITAVL 314
+ +L
Sbjct: 269 EGAVAYLL 276
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 44.1 bits (103), Expect = 2e-05
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 249 HKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 300
K + + + I G+G ND L+ A IG+A+ A + ++AAD V
Sbjct: 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYV 241
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 43.8 bits (102), Expect = 2e-05
Identities = 12/53 (22%), Positives = 23/53 (43%)
Query: 248 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 300
+ L + IG+ ND ++ A +G+AV +A + + A+ V
Sbjct: 200 TGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFV 252
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 43.4 bits (101), Expect = 3e-05
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 249 HKYEIVKHLQARNHICG----MIGNGVNDAPALKKADIGIAVADATDAARSAADIV 300
K + +K L + +I +G+ +ND L+ A G+A+ +A + +S AD V
Sbjct: 213 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAV 268
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 43.0 bits (100), Expect = 3e-05
Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
Query: 217 ALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPA 276
LS + +D V +E ++ + + I + G+ ND
Sbjct: 163 ILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIV-VFGDNENDLFM 221
Query: 277 LKKADIGIAVADATDAARSAADIV 300
++A + +A+ +A + + A+DIV
Sbjct: 222 FEEAGLRVAMENAIEKVKEASDIV 245
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 43.0 bits (100), Expect = 4e-05
Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 4/69 (5%)
Query: 249 HKYEIVKHLQARNHICG----MIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEP 304
HK + L R + IG+ NDA LK A A+ +A + + A +
Sbjct: 190 HKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDN 249
Query: 305 GLNVIITAV 313
+ +
Sbjct: 250 NHEGALNVI 258
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Score = 36.9 bits (84), Expect = 0.003
Identities = 9/59 (15%), Positives = 17/59 (28%)
Query: 246 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEP 304
+ +HL + G+ ND + + G+ V +A D
Sbjct: 163 KGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSR 221
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 450 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 100.0 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.96 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.92 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.84 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.58 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.4 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.37 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.29 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.24 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.21 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.19 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.16 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.16 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.15 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.1 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.05 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.04 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.03 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.86 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 98.85 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.78 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.62 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.22 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 98.12 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.04 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 98.03 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.85 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.78 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.69 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.62 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 97.33 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 97.2 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 97.19 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 97.16 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 97.08 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 97.07 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 97.04 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 96.87 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 96.75 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 96.72 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 96.67 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 96.5 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 96.43 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 95.78 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 95.41 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 95.33 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 95.11 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 95.01 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 94.87 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 94.8 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 94.62 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 93.36 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 92.76 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 92.51 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 92.29 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 88.2 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=3.2e-33 Score=249.58 Aligned_cols=148 Identities=38% Similarity=0.531 Sum_probs=129.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC--CccccCCchhhhhhcCChhHHhhhccceeec
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP--SSALSGQDRDESIVALPVDELIEKADGFAGV 245 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~ 245 (450)
||||++++++|+.|+++|++|||+|||+..+|.++|+++||..+... ...+.+.+.+ .....+..+.+++..+|+++
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~v~ar~ 97 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFD-DLPLAEQREACRRACCFARV 97 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHH-HSCHHHHHHHHHHCCEEESC
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccc-hhhHHHHhhhhhhhhhhhcc
Confidence 99999999999999999999999999999999999999999754321 1122222221 22223345678888999999
Q ss_pred ChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHH
Q 013069 246 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLIS 316 (450)
Q Consensus 246 ~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~ 316 (450)
+|+||..+|+.||+.|++|+|+|||.||++||+.|||||+++++++.|+++||+++++++|+.|+++|+||
T Consensus 98 ~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 98 EPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred chhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEeccccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.96 E-value=4.9e-30 Score=220.28 Aligned_cols=125 Identities=34% Similarity=0.479 Sum_probs=110.2
Q ss_pred EEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhh
Q 013069 159 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEK 238 (450)
Q Consensus 159 ~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (450)
...+.++++|++|++++++|+.|+++|++++|+|||+..+|.++|++|||.
T Consensus 11 ~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~----------------------------- 61 (135)
T d2b8ea1 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD----------------------------- 61 (135)
T ss_dssp CCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------------------
T ss_pred ceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh-----------------------------
Confidence 456688999999999999999999999999999999999999999999995
Q ss_pred ccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 239 ADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 239 ~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
.+|++++|++|..+|+.+|.. +.|+|+|||.||+|||+.|||||+++++++.++++||+++++++|+.|+.+|+
T Consensus 62 -~v~~~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advgia~~~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 62 -LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp -EEECSCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEEEEECCC--------SEEESSCCTHHHHHHHC
T ss_pred -hhccccchhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCCeeeecCccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence 479999999999999999875 68999999999999999999999999999999999999999999999998873
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.92 E-value=3.5e-29 Score=251.94 Aligned_cols=304 Identities=10% Similarity=-0.019 Sum_probs=203.7
Q ss_pred CccccEEEeCcccccccCceEEEeEeee-----cccCCCChH-HHH------HHHHHhcccCCCChHHHHHHHhhcCc--
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIE-----IFAGGVDAD-TVV------LMAARASQVENLDVIDAAIVGMLADP-- 66 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~-----~~~~~~~~~-~il------~~aa~~~~~~~~~pi~~ai~~~~~~~-- 66 (450)
||...++|+|||||+|.|+|.+..+.-+ .-..|...+ +++ .+++.+.. ..+|...+++......
T Consensus 36 Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~k~~g~n~~~dl~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 113 (380)
T d1qyia_ 36 LGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIHLIDILKK--LSHDEIEAFMYQDEPVEL 113 (380)
T ss_dssp TCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTT--SCHHHHHHHHHCSSCHHH
T ss_pred cccceeeecCcccchhhhhheeeeecchhhhHhhhhcCCChhHHHHHHHHHHHHHHHHhh--cCCCcHHHHHHHHhhccc
Confidence 5677899999999999999987542210 001122222 221 11122222 1234455555433221
Q ss_pred --hhhhhcccEEEEeccCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcCChhhHHHHHHHHHHHHHhcchhhhhhce
Q 013069 67 --KEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQ 144 (450)
Q Consensus 67 --~~~~~~~~~l~~~pF~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~ 144 (450)
...+..+.....+||++.+|+|++.....++.+..+.+|+++.+. ........+...+.+++.+|+|+++++++
T Consensus 114 ~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~----~~~~~~~~~~~~~~~~a~~~~r~l~~~~~ 189 (380)
T d1qyia_ 114 KLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELH----VSDATLFSLKGALWTLAQEVYQEWYLGSK 189 (380)
T ss_dssp HHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTT----CSCCGGGSTTCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhcC----CcHHHHHHHHhHHHHHHHHHHHHHHHhhh
Confidence 122345666778899999999987655444444445566665532 22333445567788999999999999998
Q ss_pred ecCCCCcCCCCCCcEEEEeccCCCCCC--cchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCc
Q 013069 145 EVPEGSKESSGSPWQFIGLIPLFDPPI--HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQD 222 (450)
Q Consensus 145 ~~~~~~~~~~e~~~~~lG~i~l~D~lr--~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~ 222 (450)
..+..+.+ ....+...|++..++++| ++++++|+.|+++|++++|+|||+..+|..+++++||........++.+.+
T Consensus 190 ~~~~~~~~-~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d 268 (380)
T d1qyia_ 190 LYEDVEKK-IARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASD 268 (380)
T ss_dssp HHHHHHCS-CCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHH
T ss_pred cccccccc-cchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEEecch
Confidence 65422111 122334579999999965 499999999999999999999999999999999999964322222232222
Q ss_pred hhh--------hhhcCChhHHhhhccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCC---eeEEec-cch
Q 013069 223 RDE--------SIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKAD---IGIAVA-DAT 290 (450)
Q Consensus 223 ~~~--------~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~Ad---vGIa~~-~~~ 290 (450)
... .....+-.+.+..+..+++++|.+|..+++.++..++.|+|||||.||++|++.|| |||+|| .++
T Consensus 269 ~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~ 348 (380)
T d1qyia_ 269 VLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGK 348 (380)
T ss_dssp HHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBG
T ss_pred hhhhhhhccccccccCCChHHHHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCc
Confidence 110 01122334556666678999999999999999999999999999999999999999 999998 455
Q ss_pred HHHh----hccCEEecCCCchHHHHHH
Q 013069 291 DAAR----SAADIVLTEPGLNVIITAV 313 (450)
Q Consensus 291 ~~a~----~aaDivl~~~~l~~i~~~I 313 (450)
+..+ ..||+|+. ++..+..++
T Consensus 349 ~~~~el~~~~AD~ii~--~~~el~~il 373 (380)
T d1qyia_ 349 DAAGELEAHHADYVIN--HLGELRGVL 373 (380)
T ss_dssp GGHHHHHHTTCSEEES--SGGGHHHHH
T ss_pred ccHHHHHhCCCCEEEC--CHHHHHHHH
Confidence 4443 37999994 466665554
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.84 E-value=9e-21 Score=175.14 Aligned_cols=122 Identities=20% Similarity=0.266 Sum_probs=98.5
Q ss_pred CChHHHHHHHhhc----CchhhhhcccEEEEeccCCCCceEEEEEEcc--CCeEEEEEcCCHHHHHhhhc----------
Q 013069 52 LDVIDAAIVGMLA----DPKEARADIQEVHFLPFDPTGKRTALTYIDS--EGKMHRVTKGSPEQILNLLH---------- 115 (450)
Q Consensus 52 ~~pi~~ai~~~~~----~~~~~~~~~~~l~~~pF~~~~kr~svi~~~~--~g~~~~~~KGa~~~i~~~~~---------- 115 (450)
.+|.|.||+.++. +....+..++.+..+||+|.+|+|+++++.. ++.+++|+|||||.|+++|.
T Consensus 65 GdptE~ALl~~a~~~~~~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~~ 144 (214)
T d1q3ia_ 65 GDASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEIP 144 (214)
T ss_dssp SCHHHHHHHHHHHHHHSCHHHHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEEE
T ss_pred cChHHHHHHHHHHHhCCCHHHHHhhCcEeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheeeCCceee
Confidence 4799999998764 3445678899999999999999999999863 46788999999999999997
Q ss_pred CChhhHHHHHHHHHHHHHhcchhhhhhceecCCCC-----------cCCCCCCcEEEEeccCCCCCCcc
Q 013069 116 NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGS-----------KESSGSPWQFIGLIPLFDPPIHD 173 (450)
Q Consensus 116 ~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~-----------~~~~e~~~~~lG~i~l~D~lr~~ 173 (450)
.+++.++.+.+.+++|+.+|+|||++||+.++.++ .+..+++|+|+|++++.||||++
T Consensus 145 l~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 145 LDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred chHHHHHHHHHHHHHHhhCCcEEEEEEEEecCccccccccccChhhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 35677889999999999999999999999987553 23457899999999999999985
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.58 E-value=6.7e-16 Score=144.38 Aligned_cols=115 Identities=17% Similarity=0.307 Sum_probs=91.3
Q ss_pred CChHHHHHHHhhcCc--------------------hhhhhcccEEEEeccCCCCceEEEEEEccCC-----eEEEEEcCC
Q 013069 52 LDVIDAAIVGMLADP--------------------KEARADIQEVHFLPFDPTGKRTALTYIDSEG-----KMHRVTKGS 106 (450)
Q Consensus 52 ~~pi~~ai~~~~~~~--------------------~~~~~~~~~l~~~pF~~~~kr~svi~~~~~g-----~~~~~~KGa 106 (450)
.+|.+.||+.++... ...+..|+.+..+||+|.+|||++++...++ .+.+|+|||
T Consensus 78 G~pTE~ALl~~a~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGA 157 (239)
T d1wpga3 78 GEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGA 157 (239)
T ss_dssp SCHHHHHHHHHHHHHCTTCCCCSSSCHHHHTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEEC
T ss_pred CCCCcHHHHHHHHHhCCChHHhhccchhhhhccchhhhhhhCeEEEEeeecccccEEEEEEEcCCCCcccceeEEEEeCC
Confidence 479999998776321 0124678899999999999999999987554 357999999
Q ss_pred HHHHHhhhc----------CChhhHHHHHHHHHHH--HHhcchhhhhhceecCCCCc----------CCCCCCcEEEEec
Q 013069 107 PEQILNLLH----------NKSKIGRKVNAVINKF--AERGLRSLAVAYQEVPEGSK----------ESSGSPWQFIGLI 164 (450)
Q Consensus 107 ~~~i~~~~~----------~~~~~~~~~~~~~~~~--a~~Glr~l~vA~~~~~~~~~----------~~~e~~~~~lG~i 164 (450)
||.|+++|. .+++.++.+.+.+++| +++|+|||++||+.++..+. +.+|++|+|+|++
T Consensus 158 pe~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvLa~A~k~~~~~~~~~~~~~~~~~~~~E~~L~flGlv 237 (239)
T d1wpga3 158 PEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVV 237 (239)
T ss_dssp HHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTSSCCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEE
T ss_pred hHHHHHhccceecCCceeeCCHHHHHHHHHHHHHHhHhhCCCEEEEEEEEECCcccccccccchhhHHHhcCCCEEEEEE
Confidence 999999996 3456667777888876 67999999999999986542 2347899999999
Q ss_pred cC
Q 013069 165 PL 166 (450)
Q Consensus 165 ~l 166 (450)
++
T Consensus 238 gi 239 (239)
T d1wpga3 238 GM 239 (239)
T ss_dssp EE
T ss_pred CC
Confidence 85
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.40 E-value=1.9e-13 Score=124.42 Aligned_cols=148 Identities=22% Similarity=0.211 Sum_probs=104.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC--Cc-cccCC------chhh--------------
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP--SS-ALSGQ------DRDE-------------- 225 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~--~~-~l~~~------~~~~-------------- 225 (450)
.+.+.+.++|++|++.|++|+++||+....+..++..+++....+. .. ..... ....
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 98 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHHHHHhccc
Confidence 4678899999999999999999999999999999999988643110 00 00000 0000
Q ss_pred -----hhh-----------cCC---hhHHhhhcc---------ceeecC--hhhHHHHHHHHhhc----CCEEEEecCCC
Q 013069 226 -----SIV-----------ALP---VDELIEKAD---------GFAGVF--PEHKYEIVKHLQAR----NHICGMIGNGV 271 (450)
Q Consensus 226 -----~~~-----------~~~---~~~~~~~~~---------v~a~~~--P~~K~~iV~~lq~~----g~~v~~iGDG~ 271 (450)
... ... ..++..... .+..+. ...|...++.+... ...|+++|||.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~ 178 (230)
T d1wr8a_ 99 ARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE 178 (230)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred ccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCc
Confidence 000 000 111111111 122222 34688888776543 45699999999
Q ss_pred CChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHH
Q 013069 272 NDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLIS 316 (450)
Q Consensus 272 ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~ 316 (450)
||.+||+.|++||+|+++++.++++||+|+..++..+++++|.+.
T Consensus 179 NDi~ml~~ag~~vav~na~~~~k~~A~~v~~~~~~~gv~~~i~~~ 223 (230)
T d1wr8a_ 179 NDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIYHI 223 (230)
T ss_dssp GGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHHHH
T ss_pred cHHHHHHHCCeEEEECCCCHHHHHhCCEEECCCCcCHHHHHHHHH
Confidence 999999999999999999999999999999999999999888743
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.37 E-value=1.8e-12 Score=118.63 Aligned_cols=149 Identities=19% Similarity=0.150 Sum_probs=105.2
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--CCccccCC-ch----------hhhhh---c-
Q 013069 167 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSALSGQ-DR----------DESIV---A- 229 (450)
Q Consensus 167 ~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~--~~~~l~~~-~~----------~~~~~---~- 229 (450)
...+.+++.++++.|++.|+.++++||++...+..++..+|+....+ +...+... .. ..... .
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 97 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHh
Confidence 34567899999999999999999999999999999999999865322 11111000 00 00000 0
Q ss_pred ----------------------CChhHHh---hhc-------cceeecCh--hhHHHHHHHHhhc----CCEEEEecCCC
Q 013069 230 ----------------------LPVDELI---EKA-------DGFAGVFP--EHKYEIVKHLQAR----NHICGMIGNGV 271 (450)
Q Consensus 230 ----------------------~~~~~~~---~~~-------~v~a~~~P--~~K~~iV~~lq~~----g~~v~~iGDG~ 271 (450)
...+.+. ... ..+..+.| .+|...++.+.+. ...|+++|||.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~ 177 (225)
T d1l6ra_ 98 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 177 (225)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred cCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCc
Confidence 0000010 000 01223333 4798888877654 24499999999
Q ss_pred CChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHH
Q 013069 272 NDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 315 (450)
Q Consensus 272 ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~ 315 (450)
||.+|++.|++||||+|+.+.+++.||+|+..++..+|.+++++
T Consensus 178 nD~~m~~~a~~~vav~na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 178 NDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp GGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred chHHHHHHCCeEEEECCCcHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 99999999999999999999999999999999999999998873
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.29 E-value=6.4e-12 Score=111.37 Aligned_cols=101 Identities=24% Similarity=0.224 Sum_probs=84.4
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhhHHHHHH
Q 013069 176 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVK 255 (450)
Q Consensus 176 ~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~ 255 (450)
.+|+.|+..|+.+.++||+....+...++.+++. .++. ...+|...++
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~------------------------------~~~~--~~~~K~~~l~ 86 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIK------------------------------LFFL--GKLEKETACF 86 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCC------------------------------EEEE--SCSCHHHHHH
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhccc------------------------------cccc--ccccHHHHHH
Confidence 3699999999999999999999999999999985 1222 3345655555
Q ss_pred HHhh----cCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchH
Q 013069 256 HLQA----RNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV 308 (450)
Q Consensus 256 ~lq~----~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~ 308 (450)
.+.+ ....|+++||+.||.+||+.|++|+|++++.+.++..||+|+..++-.+
T Consensus 87 ~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~nA~~~vk~~A~~Vt~~~GG~G 143 (177)
T d1k1ea_ 87 DLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKG 143 (177)
T ss_dssp HHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTT
T ss_pred HHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEcCCccHHHHHhCCEEeCCCCCCc
Confidence 4443 3467999999999999999999999999999999999999999887554
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.24 E-value=6.7e-12 Score=117.51 Aligned_cols=71 Identities=23% Similarity=0.232 Sum_probs=62.1
Q ss_pred ecChh--hHHHHHHHHhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 244 GVFPE--HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 244 ~~~P~--~K~~iV~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
.+.|. +|...++.+.+. ...++++|||.||.+||+.|++|++|+|+.+.++..||+|+..++-.++.++++
T Consensus 190 ~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~~~lk~~a~~i~~~~~~~Gv~~~l~ 266 (271)
T d1rkqa_ 190 EILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIE 266 (271)
T ss_dssp EEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred EecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCcChHHHHHH
Confidence 34454 699999888764 345999999999999999999999999999999999999999888899998886
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.21 E-value=2.4e-11 Score=114.35 Aligned_cols=70 Identities=21% Similarity=0.276 Sum_probs=61.8
Q ss_pred cChh--hHHHHHHHHhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 245 VFPE--HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 245 ~~P~--~K~~iV~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
+.|. .|...++.+.+. ...|+++|||.||.+||+.|+.||||+|+++.+++.||+|+..++-.+|.++|+
T Consensus 207 i~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~~~~k~~A~~v~~~~~~~Gv~~~l~ 282 (285)
T d1nrwa_ 207 LSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMK 282 (285)
T ss_dssp EEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 4454 799988888764 245999999999999999999999999999999999999999888899998886
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.19 E-value=8.2e-12 Score=116.90 Aligned_cols=72 Identities=21% Similarity=0.249 Sum_probs=63.0
Q ss_pred eecChh--hHHHHHHHHhhc-C---CEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 243 AGVFPE--HKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 243 a~~~P~--~K~~iV~~lq~~-g---~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
.+++|. +|...++.|.+. | ..|+++|||.||.+||+.|+.|++|+|+.+.+++.||+|+..++-.+|+++|+
T Consensus 182 ~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 182 IDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp EEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 345554 599999888764 2 35999999999999999999999999999999999999999999999998886
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.16 E-value=7.9e-12 Score=116.82 Aligned_cols=73 Identities=26% Similarity=0.283 Sum_probs=63.0
Q ss_pred eecChh--hHHHHHHHHhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHH
Q 013069 243 AGVFPE--HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 315 (450)
Q Consensus 243 a~~~P~--~K~~iV~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~ 315 (450)
.++.|. .|...++.|.++ ...++++|||.||.+||+.|+.||+|+||.+.+++.||+|+..++-.+|.++|+.
T Consensus 178 ~ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 178 ADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp CEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence 344453 699888888653 3569999999999999999999999999999999999999998889999999863
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.16 E-value=1.5e-11 Score=112.09 Aligned_cols=148 Identities=14% Similarity=0.027 Sum_probs=106.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
+++|++.+.++.|++.|+++.++|+.....+..+.+++|+....+........+..... .-......+....|.
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~------~~~~~~~~~~~~k~~ 148 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHID------WPHSCKGTCSNQCGC 148 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEE------CTTCCCTTCCSCCSS
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcceec------cccccccccccCCHH
Confidence 36899999999999999999999999999999999999876432221111111000000 000001234567889
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhc-cCEEecCCCchHHHHHHHHHHHHHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSA-ADIVLTEPGLNVIITAVLISRAIFQRM 323 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~a-aDivl~~~~l~~i~~~I~~~R~~~~~i 323 (450)
.|..+++.++..++.|+|+||+.||.+|++.||++++++...+.+.+. .++ ..-.+|+.|...+..-..+.+.+
T Consensus 149 ~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~-~~~~d~~~i~~~l~~~~~~~~~~ 223 (226)
T d2feaa1 149 CKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNH-LPYQDFYEIRKEIENVKEVQEWL 223 (226)
T ss_dssp CHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCE-ECCSSHHHHHHHHHTSHHHHHHH
T ss_pred HHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEecchHHHHHHcCCCe-eecCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999998755555554 343 33468998888887665555544
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.15 E-value=4.1e-11 Score=109.36 Aligned_cols=122 Identities=18% Similarity=0.173 Sum_probs=89.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCC---ccc-cCCchhhhhhcCChhHHhhhccceee
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPS---SAL-SGQDRDESIVALPVDELIEKADGFAG 244 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~---~~l-~~~~~~~~~~~~~~~~~~~~~~v~a~ 244 (450)
+++|++.++|+.|++.|++++++||.....+..+++.+|+....+-. .+. .|.-.. .......
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g-------------~~~~~p~ 148 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAG-------------FDETQPT 148 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEE-------------ECTTSGG
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhcccc-------------ceeeeee
Confidence 36899999999999999999999999999999999999996321000 000 000000 0000112
Q ss_pred cChhhHHHHHHHHhhc--CCEEEEecCCCCChHhHhhCCeeEEecc--chHHHhhccCEEecC
Q 013069 245 VFPEHKYEIVKHLQAR--NHICGMIGNGVNDAPALKKADIGIAVAD--ATDAARSAADIVLTE 303 (450)
Q Consensus 245 ~~P~~K~~iV~~lq~~--g~~v~~iGDG~ND~~al~~AdvGIa~~~--~~~~a~~aaDivl~~ 303 (450)
..+..|..+++.++.. ...|+|+|||.||++|++.||++||++. .....++.+|+++.+
T Consensus 149 ~~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~ 211 (217)
T d1nnla_ 149 AESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD 211 (217)
T ss_dssp GSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESC
T ss_pred eccchHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeCC
Confidence 3467799999998764 3469999999999999999999999973 456777889998854
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.10 E-value=6.5e-11 Score=105.36 Aligned_cols=130 Identities=22% Similarity=0.266 Sum_probs=93.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceee--c
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG--V 245 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~--~ 245 (450)
.++.+++.+.++.++..|..+.++||.....+....++.++........... ... ....... .
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------------~~~~~~~~~~ 138 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVK--DGK-------------LTGDVEGEVL 138 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEE--TTE-------------EEEEEECSSC
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhccc--ccc-------------cccccccccc
Confidence 3678899999999999999999999999999999999888753211000000 000 0000000 1
Q ss_pred ChhhHH----HHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHH
Q 013069 246 FPEHKY----EIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAV 313 (450)
Q Consensus 246 ~P~~K~----~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I 313 (450)
.+..|. .+.+.++.....|+++|||.||.+|++.||+|||| ++.+..++.||+|+..+++.+|+++|
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~-na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 139 KENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp STTHHHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE-SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred ccccccchhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE-CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 122233 33344444456799999999999999999999999 88999999999999999999988764
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.05 E-value=3.6e-10 Score=100.19 Aligned_cols=129 Identities=16% Similarity=0.178 Sum_probs=90.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhh
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 249 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 249 (450)
..++....++.+ +.+..+.++|+............+++.....+........ .........+..
T Consensus 70 ~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------------~~~~~~~~~~~~ 133 (206)
T d1rkua_ 70 PLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD---------------RVVGYQLRQKDP 133 (206)
T ss_dssp CCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTS---------------CEEEEECCSSSH
T ss_pred ccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeeccc---------------ccccccccchhh
Confidence 455666666665 5789999999999999999999988753211110000000 001123345566
Q ss_pred HHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHH
Q 013069 250 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 315 (450)
Q Consensus 250 K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~ 315 (450)
+...++.++.....|+|+|||.||++||+.||+||||+...+..++++|+++. .++..++.+|..
T Consensus 134 ~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAmna~~~v~~~~~~~~~~-~~~~d~~~~~~~ 198 (206)
T d1rkua_ 134 KRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFLK 198 (206)
T ss_dssp HHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSCEE-CSHHHHHHHHHH
T ss_pred HHHHHHHhcccccceEEecCCccCHHHHHhCCccEEECCCHHHHHhCCCceee-cCHHHHHHHHHH
Confidence 67788888888999999999999999999999999995445555567787764 677778876664
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.04 E-value=1.7e-10 Score=108.00 Aligned_cols=71 Identities=20% Similarity=0.294 Sum_probs=62.1
Q ss_pred ecChh--hHHHHHHHHhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 244 GVFPE--HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 244 ~~~P~--~K~~iV~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
+++|. +|+..++.+.+. ...|+++|||.||.+||+.|++||+|+|+++.+++.||+|+.+++..+++++|+
T Consensus 183 di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred eecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 45554 699988887654 235899999999999999999999999999999999999999999999998875
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.03 E-value=1.6e-10 Score=108.19 Aligned_cols=66 Identities=29% Similarity=0.324 Sum_probs=54.6
Q ss_pred hHHHHHHHHhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCch-HHHHHHH
Q 013069 249 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLN-VIITAVL 314 (450)
Q Consensus 249 ~K~~iV~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~-~i~~~I~ 314 (450)
.|...++.+.+. ...|+++|||.||.+||+.|++|++|+|+.+.+++.||+|+..++-. ++..+++
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCCCHHHHHhCCEEECCcCCCcHHHHHHH
Confidence 577777776653 35699999999999999999999999999999999999999765544 4666654
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.86 E-value=1.8e-09 Score=98.32 Aligned_cols=44 Identities=11% Similarity=0.053 Sum_probs=39.3
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC
Q 013069 167 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 210 (450)
Q Consensus 167 ~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~ 210 (450)
.+...+.++++|++|+++|+.+++.||++...+..+.+.+++..
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~ 58 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET 58 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccc
Confidence 34445789999999999999999999999999999999999864
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=98.85 E-value=2.5e-09 Score=90.15 Aligned_cols=122 Identities=22% Similarity=0.299 Sum_probs=94.3
Q ss_pred cCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchh---hhhcccEEEEeccCCCCceEEEEEEccCCeEEEEEcCCH
Q 013069 31 AGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKE---ARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSP 107 (450)
Q Consensus 31 ~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~---~~~~~~~l~~~pF~~~~kr~svi~~~~~g~~~~~~KGa~ 107 (450)
..|+++++++.+|+.++..++| |+++||+.+++.... ....+......||....+...+. .+| ..+.+|++
T Consensus 10 ~~G~~~~ell~~AA~aE~~SeH-PlakAIv~~Ak~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~g--~~v~~G~~ 83 (136)
T d2a29a1 10 AQGVDEKTLADAAQLASLADET-PEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGIN---IDN--RMIRKGSV 83 (136)
T ss_dssp CTTCCHHHHHHHHHHHHHTCCS-HHHHHHHHHHHHHHCCCCCCTTTTTCEEEEEETTTTEEEEE---ETT--EEEEEECH
T ss_pred CCCCCHHHHHHHHHHHhCCCCc-hHHHHHHHHHHHhcCCCccccccccccccccccccceEEEE---ECC--EEEEecHH
Confidence 4799999999999999998876 999999998853221 12244555677888777655543 356 46778999
Q ss_pred HHHHhhhc-CChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCCcEEEEeccCCCCCC
Q 013069 108 EQILNLLH-NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPI 171 (450)
Q Consensus 108 ~~i~~~~~-~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~D~lr 171 (450)
..+.+++. ....++..+.+.+++++.+|.+++.||.++ +++|++++.|++|
T Consensus 84 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va~d~-------------~~~G~i~l~D~iK 135 (136)
T d2a29a1 84 DAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS-------------RVLGVIALKDIVK 135 (136)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHHHHHHTTSEEEEEEETT-------------EEEEEEEEEESSC
T ss_pred HHHHHHHHHcCCCCcHHHHHHHHHHHHCCCeEEEEEECC-------------EEEEEEEEEeecC
Confidence 88876553 223456678888999999999999999887 9999999999986
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.78 E-value=6.6e-09 Score=95.29 Aligned_cols=69 Identities=17% Similarity=0.116 Sum_probs=58.9
Q ss_pred hhhHHHHHHHHhhcC----CEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccC-------EEecCCCchHHHHHHHH
Q 013069 247 PEHKYEIVKHLQARN----HICGMIGNGVNDAPALKKADIGIAVADATDAARSAAD-------IVLTEPGLNVIITAVLI 315 (450)
Q Consensus 247 P~~K~~iV~~lq~~g----~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaD-------ivl~~~~l~~i~~~I~~ 315 (450)
..+|...++.+.+.. ..|+++|||.||.+||+.|+.|++|+|+.+.+++.|| ++...++..+|.++|.+
T Consensus 160 ~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~~ 239 (244)
T d1s2oa1 160 RSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeCCCCHHHHHHhhcccccceEEcCCCCccHHHHHHHH
Confidence 346999998887652 3499999999999999999999999999999999988 67777778898888763
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.62 E-value=7.1e-08 Score=86.51 Aligned_cols=41 Identities=15% Similarity=0.067 Sum_probs=38.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 209 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~ 209 (450)
.+.+.+.++|++|++.|+.++++||++...+..+.+.+++.
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 46688999999999999999999999999999999999985
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.22 E-value=2.8e-07 Score=82.68 Aligned_cols=53 Identities=21% Similarity=0.318 Sum_probs=46.9
Q ss_pred hHHHHHHHHhhc-CCEEEEecC----CCCChHhHhhCC-eeEEeccchHHHhhccCEEe
Q 013069 249 HKYEIVKHLQAR-NHICGMIGN----GVNDAPALKKAD-IGIAVADATDAARSAADIVL 301 (450)
Q Consensus 249 ~K~~iV~~lq~~-g~~v~~iGD----G~ND~~al~~Ad-vGIa~~~~~~~a~~aaDivl 301 (450)
.|...++.|.+. ...|+++|| |.||.+||+.|+ .|+||+|+.+.++..+|+++
T Consensus 185 sKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~~k~~~~~~~ 243 (244)
T d2fuea1 185 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFF 243 (244)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHC
T ss_pred cHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHHHHHHHHhcC
Confidence 699999988764 567999999 569999999997 79999999999999999876
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.12 E-value=2.8e-06 Score=68.62 Aligned_cols=104 Identities=15% Similarity=0.196 Sum_probs=74.9
Q ss_pred CCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcccEEEEeccCCCCceEEEEEEccCCeEEEEEcCCHHHHHh
Q 013069 33 GVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILN 112 (450)
Q Consensus 33 ~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~l~~~pF~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~ 112 (450)
+.+++++|.+++..+..++| |+++||+.++.+.+........+...|-. ++ .|+ .+..|++.++.+
T Consensus 9 ~~~e~elL~~aaslE~~S~H-PlA~AIv~~a~~~~~~~~~~~~~~~~~G~------Gi-----~g~--~v~vG~~~~~~~ 74 (113)
T d2b8ea2 9 NGDERELLRLAAIAERRSEH-PIAEAIVKKALEHGIELGEPEKVEVIAGE------GV-----VAD--GILVGNKRLMED 74 (113)
T ss_dssp SSCHHHHHHHHHHHTTTCCS-HHHHHHHHHHHTTTCCCCCCSCEEEETTT------EE-----EET--TEEEECHHHHHH
T ss_pred CCCHHHHHHHHHHHHCcCCC-chHHHHHHHHHHhcCCCCccccceeeccc------eE-----EeE--EEEECcHHHHHh
Confidence 45899999999999999887 99999999886543222222333333311 11 111 255699999877
Q ss_pred hhcCChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCCcEEEEeccC
Q 013069 113 LLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPL 166 (450)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l 166 (450)
.. -.+++.+...++.+..+|.+++.|++++ +++|++++
T Consensus 75 ~~---~~~~~~~~~~~~~~~~~G~T~v~va~d~-------------~~~G~ial 112 (113)
T d2b8ea2 75 FG---VAVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAV 112 (113)
T ss_dssp TT---CCCCHHHHHHHHHHHTTTCEEEEEEETT-------------EEEEEEEE
T ss_pred cC---CCCCHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEE
Confidence 43 3455677888999999999999999987 99999875
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.04 E-value=1.6e-06 Score=77.18 Aligned_cols=52 Identities=12% Similarity=0.243 Sum_probs=40.9
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecC
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 303 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~ 303 (450)
+|...++.|.... .++++||+.||.+||+.|+.|++|++|.. +.+|++++.+
T Consensus 159 ~Kg~al~~l~~~~-~~i~~GDs~ND~~Mf~~~~~~~av~~g~~--~~~A~~~~~~ 210 (229)
T d1u02a_ 159 NKGSAIRSVRGER-PAIIAGDDATDEAAFEANDDALTIKVGEG--ETHAKFHVAD 210 (229)
T ss_dssp CHHHHHHHHHTTS-CEEEEESSHHHHHHHHTTTTSEEEEESSS--CCCCSEEESS
T ss_pred CHHHHHHHHhccc-cceeecCCCChHHHHhccCCeEEEEeCCC--CccCeEEcCC
Confidence 6999999998764 57789999999999999977766653322 4578888864
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.03 E-value=1.6e-05 Score=74.60 Aligned_cols=132 Identities=10% Similarity=0.055 Sum_probs=81.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCC---CC-CccccCCchhhhhhcCChhHHhhhccceee
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNM---YP-SSALSGQDRDESIVALPVDELIEKADGFAG 244 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~---~~-~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~ 244 (450)
++|+++++.++.|++.|+++.++||--...+.++++++|+.... +. ...+.+......... --
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~-------------~~ 201 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKG-------------EL 201 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECS-------------SC
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccC-------------Cc
Confidence 48999999999999999999999999999999999999986431 10 000111000000000 00
Q ss_pred cChhhHHHHH----HHHh--hcCCEEEEecCCCCChHhHhh---CCeeEEec--cc-----hHHHhhccCEEecCCCchH
Q 013069 245 VFPEHKYEIV----KHLQ--ARNHICGMIGNGVNDAPALKK---ADIGIAVA--DA-----TDAARSAADIVLTEPGLNV 308 (450)
Q Consensus 245 ~~P~~K~~iV----~~lq--~~g~~v~~iGDG~ND~~al~~---AdvGIa~~--~~-----~~~a~~aaDivl~~~~l~~ 308 (450)
.....|...+ ..++ .....|.++|||+||..|.+. ++..+++| +. -+.-.++-|||+.++.--.
T Consensus 202 i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~~ 281 (291)
T d2bdua1 202 IHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLE 281 (291)
T ss_dssp CCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBCH
T ss_pred cccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEecCCChh
Confidence 1122343322 2222 234679999999999999874 34455444 21 1223467799988776555
Q ss_pred HHHHH
Q 013069 309 IITAV 313 (450)
Q Consensus 309 i~~~I 313 (450)
++..|
T Consensus 282 v~~~i 286 (291)
T d2bdua1 282 VVNSI 286 (291)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55444
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.85 E-value=1.3e-05 Score=71.69 Aligned_cols=124 Identities=14% Similarity=0.159 Sum_probs=79.0
Q ss_pred CCcchHHHHHHHHhCC-CeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 170 PIHDSAETIRRALSLG-LGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 170 lr~~~~~~I~~l~~~G-i~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
+-|++.+++++|++.| +++.++|+.....+..+.+.+|+..-. + .++.+.+.. ...-.|.
T Consensus 92 ~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~f-d-~i~~~~~~~-----------------~~k~~p~ 152 (228)
T d2hcfa1 92 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYF-P-FGAFADDAL-----------------DRNELPH 152 (228)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTC-S-CEECTTTCS-----------------SGGGHHH
T ss_pred ecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccc-c-ccccccccc-----------------cccchhH
Confidence 4689999999999987 899999999999999999999986321 1 011110000 0000111
Q ss_pred hHHHHHHHHhh---cCCEEEEecCCCCChHhHhhCCee---EEecc-chH-HHhhccCEEecCCCchHHHHHHH
Q 013069 249 HKYEIVKHLQA---RNHICGMIGNGVNDAPALKKADIG---IAVAD-ATD-AARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 249 ~K~~iV~~lq~---~g~~v~~iGDG~ND~~al~~AdvG---Ia~~~-~~~-~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
--...++.+.. ....|+||||+.+|+.|-+.|++. |+.|. ..+ .....+|+++ ++++.+..+|.
T Consensus 153 ~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi--~~~~el~~~l~ 224 (228)
T d2hcfa1 153 IALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLF--KNFAETDEVLA 224 (228)
T ss_dssp HHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEE--SCSCCHHHHHH
T ss_pred HHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEE--CCHHHHHHHHH
Confidence 11223333322 235799999999999999999955 33343 222 2444679998 45777776664
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.78 E-value=1.4e-05 Score=70.77 Aligned_cols=124 Identities=15% Similarity=0.143 Sum_probs=84.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.++++.|++.|+++.++|+.....+..+.+.+|+.... . .++...+. ....-.|+
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f-~-~~~~~~~~-----------------~~~kp~p~ 155 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLF-S-EMLGGQSL-----------------PEIKPHPA 155 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC-S-EEECTTTS-----------------SSCTTSSH
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhc-c-cccccccc-----------------ccccccch
Confidence 36799999999999999999999999999999999999985211 0 01100000 01112233
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCe-eEEecc----chHHHhhccCEEecCCCchHHHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVAD----ATDAARSAADIVLTEPGLNVIITAV 313 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~Adv-GIa~~~----~~~~a~~aaDivl~~~~l~~i~~~I 313 (450)
--..+.+.++-....++||||+.+|+.+-+.||+ .|.+.. ..+.....+|+++. ++..++.+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~--~l~dL~~ii 223 (224)
T d2hsza1 156 PFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFD--DFADILKIT 223 (224)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEES--SGGGGGGGT
T ss_pred hhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEEC--CHHHHHHhh
Confidence 3345556666667789999999999999999997 444431 22334456888874 466665543
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.69 E-value=6.5e-05 Score=68.19 Aligned_cols=100 Identities=16% Similarity=0.152 Sum_probs=71.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.++++.|++.|+++.++||.+...+..+.+.+|+..-.. ..++.+.+. ....-.|+
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~-d~~~~~d~~-----------------~~~KP~p~ 160 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKP-DFLVTPDDV-----------------PAGRPYPW 160 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCC-SCCBCGGGS-----------------SCCTTSSH
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhccccc-ccccccccc-----------------cccccChH
Confidence 478999999999999999999999999999999999988753211 111111100 11223344
Q ss_pred hHHHHHHHHhhc-CCEEEEecCCCCChHhHhhCCee-EEe
Q 013069 249 HKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIG-IAV 286 (450)
Q Consensus 249 ~K~~iV~~lq~~-g~~v~~iGDG~ND~~al~~AdvG-Ia~ 286 (450)
.=..+++.+... ...|+||||..+|+.+=+.|++- |++
T Consensus 161 ~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v 200 (257)
T d1swva_ 161 MCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGV 200 (257)
T ss_dssp HHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEE
Confidence 445566666543 46799999999999999999974 444
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.62 E-value=6.6e-05 Score=66.19 Aligned_cols=115 Identities=16% Similarity=0.197 Sum_probs=78.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhh
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 249 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 249 (450)
+.|++.++|+.|++.|+++.++|+.....+..+.+.+|+..- . ..++.+.+. ....-.|+-
T Consensus 89 ~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~-F-~~i~~~~~~-----------------~~~Kp~~~~ 149 (218)
T d1te2a_ 89 LLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDS-F-DALASAEKL-----------------PYSKPHPQV 149 (218)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG-C-SEEEECTTS-----------------SCCTTSTHH
T ss_pred ccchHHHHHHHhhhcccccccccccccccccccccccccccc-c-ccccccccc-----------------ccchhhHHH
Confidence 569999999999999999999999999999999999999521 1 111111100 011222333
Q ss_pred HHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEE-ecc---chHHHhhccCEEecC
Q 013069 250 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-VAD---ATDAARSAADIVLTE 303 (450)
Q Consensus 250 K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa-~~~---~~~~a~~aaDivl~~ 303 (450)
=..+++.+.-....++||||+.+|+.|-+.|++... +.. ..+.....||+++.+
T Consensus 150 ~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~ 207 (218)
T d1te2a_ 150 YLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSS 207 (218)
T ss_dssp HHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSC
T ss_pred HHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECC
Confidence 345566666566789999999999999999997543 321 122223567887744
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.33 E-value=0.00013 Score=63.77 Aligned_cols=120 Identities=10% Similarity=0.054 Sum_probs=79.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.+.++.++..| ++.++|+.....+..+.+.+|+.... ..++.+ .-.....|+
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~f--d~v~~~-------------------~~~~~~~p~ 141 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFF--DGIYGS-------------------SPEAPHKAD 141 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEE-------------------CSSCCSHHH
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhcccccc--cccccc-------------------ccccccccc
Confidence 46789999999998775 88999999999999999999985211 000000 001122233
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCe-eEEec---cchH-HHhhccCEEecCCCchHHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVA---DATD-AARSAADIVLTEPGLNVIITA 312 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~Adv-GIa~~---~~~~-~a~~aaDivl~~~~l~~i~~~ 312 (450)
-...+++.++-....++||||+.||+.|-+.|++ .|++. ...+ .....+|+++.+ +..+...
T Consensus 142 ~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~--l~el~~~ 208 (210)
T d2ah5a1 142 VIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHK--PLEVLAY 208 (210)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESS--TTHHHHH
T ss_pred ccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECC--HHHHHHH
Confidence 3344444444445679999999999999999998 45553 2222 333458998754 6666554
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.20 E-value=0.0011 Score=58.49 Aligned_cols=124 Identities=17% Similarity=0.184 Sum_probs=80.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.|++.++++.|+ .|+++.++|+........+.+.+|+..- ... ++... + .....-.|+
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~-fd~-i~~s~------------~-----~~~~KP~~~ 159 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDL-FDS-ITTSE------------E-----AGFFKPHPR 159 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGG-CSE-EEEHH------------H-----HTBCTTSHH
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhcccccccc-ccc-ccccc------------c-----ccccchhhH
Confidence 46799999999996 5899999999999999999999998521 000 00000 0 001111121
Q ss_pred hHHHHHHHHhhcCCEEEEecCC-CCChHhHhhCCeeEEe-c--cchHHHhhccCEEecCCCchHHHHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNG-VNDAPALKKADIGIAV-A--DATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG-~ND~~al~~AdvGIa~-~--~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
-=..+++.+.-....|+||||. .+|+.+-+.|++.... . +........+|+++.+ ++.++.+|.
T Consensus 160 ~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~--l~el~~~l~ 227 (230)
T d1x42a1 160 IFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSD--LREVIKIVD 227 (230)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEESS--TTHHHHHHH
T ss_pred HHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEECC--HHHHHHHHH
Confidence 1133445554445679999997 5899999999886432 2 3344445678998854 888877775
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=97.19 E-value=0.00029 Score=60.84 Aligned_cols=134 Identities=18% Similarity=0.175 Sum_probs=78.7
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHH---------------HHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhH
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAI---------------AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 234 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~---------------a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~ 234 (450)
+-+++.++++.|+++|+++.++|...... ........|+... ...+.....+... .
T Consensus 28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~cp~~p~~~~------~ 98 (182)
T d2gmwa1 28 FIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLD---GIYYCPHHPQGSV------E 98 (182)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCS---EEEEECCBTTCSS------G
T ss_pred ECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhccccc---ceeeccccccccc------c
Confidence 44899999999999999999999876311 1111122222110 0000000000000 0
Q ss_pred HhhhccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCee--EEecc---chHHHhhccCEEecCCCchHH
Q 013069 235 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG--IAVAD---ATDAARSAADIVLTEPGLNVI 309 (450)
Q Consensus 235 ~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvG--Ia~~~---~~~~a~~aaDivl~~~~l~~i 309 (450)
.......+..-.|.--..+++.+.-....++||||..+|..|=+.|+++ +.+.. ..+.....||+|+ +++..+
T Consensus 99 ~~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~--~~l~dl 176 (182)
T d2gmwa1 99 EFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLADL 176 (182)
T ss_dssp GGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGGH
T ss_pred cccccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEE--CCHHHH
Confidence 0000111233344445566777766666799999999999999999985 44432 2455566799998 458888
Q ss_pred HHHHH
Q 013069 310 ITAVL 314 (450)
Q Consensus 310 ~~~I~ 314 (450)
+++|+
T Consensus 177 ~~~ik 181 (182)
T d2gmwa1 177 PQAIK 181 (182)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 87775
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.16 E-value=0.00018 Score=62.68 Aligned_cols=100 Identities=15% Similarity=0.092 Sum_probs=67.7
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhh
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 249 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 249 (450)
+.|++.++++.|++.|+++.++|+... .+..+.+.+|+..-. ..++ +.+. .....-.|+-
T Consensus 83 ~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f--~~i~-~s~~----------------~~~~Kp~~~~ 142 (204)
T d2go7a1 83 LMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYF--TEIL-TSQS----------------GFVRKPSPEA 142 (204)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGE--EEEE-CGGG----------------CCCCTTSSHH
T ss_pred ccchHHhhhhcccccccchhhhcccch-hhhhhhhhccccccc--cccc-cccc----------------ccccchhHHH
Confidence 579999999999999999999998655 456778889985210 0000 0000 0111223434
Q ss_pred HHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeE-Eeccc
Q 013069 250 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI-AVADA 289 (450)
Q Consensus 250 K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGI-a~~~~ 289 (450)
-..+++.+.-....|+||||+.+|..+-+.+++.. .+..+
T Consensus 143 ~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~ 183 (204)
T d2go7a1 143 ATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLES 183 (204)
T ss_dssp HHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCC
T ss_pred HHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEcCC
Confidence 45566666655678999999999999999999863 34433
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=97.08 E-value=0.00042 Score=61.32 Aligned_cols=117 Identities=15% Similarity=0.067 Sum_probs=76.5
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecCh
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 247 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 247 (450)
-.+.|++.+++++|++.|+++.++|+............+|+..-.. ...... + . .....-.|
T Consensus 126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~-~~~~~~---d---------~-----~~~~KP~p 187 (253)
T d1zs9a1 126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILE-LVDGHF---D---------T-----KIGHKVES 187 (253)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGG-GCSEEE---C---------G-----GGCCTTCH
T ss_pred cccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhh-hcceee---c---------c-----ccccCCCc
Confidence 3468999999999999999999999999999888888888742110 000000 0 0 00112222
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEe----cc-chHHHhhccCEEec
Q 013069 248 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV----AD-ATDAARSAADIVLT 302 (450)
Q Consensus 248 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~----~~-~~~~a~~aaDivl~ 302 (450)
+-=...++.+.-....|+||||..+|+.+-++||+-... ++ ........++.++.
T Consensus 188 ~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~ 247 (253)
T d1zs9a1 188 ESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT 247 (253)
T ss_dssp HHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES
T ss_pred HHHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEEC
Confidence 222445555655567899999999999999999996554 22 22223345566654
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.07 E-value=6.9e-05 Score=66.51 Aligned_cols=49 Identities=18% Similarity=0.350 Sum_probs=35.3
Q ss_pred hHHHHHHHHhh-cCCEEEEecC----CCCChHhHhhCC-eeEEeccchHHHhhccC
Q 013069 249 HKYEIVKHLQA-RNHICGMIGN----GVNDAPALKKAD-IGIAVADATDAARSAAD 298 (450)
Q Consensus 249 ~K~~iV~~lq~-~g~~v~~iGD----G~ND~~al~~Ad-vGIa~~~~~~~a~~aaD 298 (450)
+|...++.|.. ....|+++|| |.||.+||+.|+ .|+++++. +.++..++
T Consensus 185 sKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~-~~~~~~~~ 239 (243)
T d2amya1 185 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAP-EDTRRICE 239 (243)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSH-HHHHHHHH
T ss_pred CHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCH-HHHHHHHH
Confidence 58877777754 3567999999 789999999998 67877664 44554443
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.04 E-value=0.00028 Score=59.80 Aligned_cols=90 Identities=10% Similarity=-0.011 Sum_probs=62.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcH-HHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecC-
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQL-AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF- 246 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~-~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~- 246 (450)
++.|++.++++.|++.|+++.++|+-+. ..+...-+..++.... . .+...-.
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~--~------------------------~~~~~~kp 99 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYF--I------------------------QREIYPGS 99 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGC--S------------------------EEEESSSC
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccc--e------------------------eeecccCC
Confidence 4789999999999999999999997554 5566666666663110 0 0111112
Q ss_pred -hhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeE
Q 013069 247 -PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 284 (450)
Q Consensus 247 -P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGI 284 (450)
|+.-..+.+.+.-....++||||..+|+.+-+.|++-.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~ 138 (164)
T d1u7pa_ 100 KVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTC 138 (164)
T ss_dssp HHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred ChHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEE
Confidence 22334455555555678999999999999999998854
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.87 E-value=0.00021 Score=62.43 Aligned_cols=119 Identities=13% Similarity=0.102 Sum_probs=78.3
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhh
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 249 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 249 (450)
+.|++.++++.|++ ++++.++|+.....+..+.+.+|+.... ..++.+.+ .....-.|+-
T Consensus 83 ~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f--~~i~~~~~-----------------~~~~KP~p~~ 142 (207)
T d2hdoa1 83 LYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRM--AVTISADD-----------------TPKRKPDPLP 142 (207)
T ss_dssp ECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGE--EEEECGGG-----------------SSCCTTSSHH
T ss_pred cccchhhhhhhhcc-cccccccccccccccccccccccccccc--cccccccc-----------------cccchhhhhh
Confidence 56899999999974 7999999999999999999988875210 00000000 0011123333
Q ss_pred HHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEe---ccchHHHhhccCEEecCCCchHHH
Q 013069 250 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV---ADATDAARSAADIVLTEPGLNVII 310 (450)
Q Consensus 250 K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~---~~~~~~a~~aaDivl~~~~l~~i~ 310 (450)
-..+++.++-....|+||||+.+|+.+-+.|++.... |..+....+.+|.++. ++..|+
T Consensus 143 ~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i~--~l~dll 204 (207)
T d2hdoa1 143 LLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQ--KPLDIL 204 (207)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEES--SGGGGG
T ss_pred hcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEeC--CHHHHH
Confidence 3555666654556799999999999999999998664 2333334456788773 355443
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.75 E-value=0.0024 Score=56.75 Aligned_cols=123 Identities=10% Similarity=0.105 Sum_probs=79.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhh
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 249 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 249 (450)
+.+++.++++.|++ |+++.++|+..........+.+|+..-. . .++...+. ....-.|+-
T Consensus 110 ~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f-d-~i~~s~~~-----------------~~~KP~p~~ 169 (247)
T d2gfha1 110 LADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYF-D-AIVIGGEQ-----------------KEEKPAPSI 169 (247)
T ss_dssp CCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGC-S-EEEEGGGS-----------------SSCTTCHHH
T ss_pred cCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhccccccc-c-cccccccc-----------------ccchhhhhh
Confidence 67999999999985 8999999999999999999999985211 0 01100000 001111211
Q ss_pred HHHHHHHHhhcCCEEEEecCCC-CChHhHhhCCee-EEecc----chHHHhhccCEEecCCCchHHHHHHH
Q 013069 250 KYEIVKHLQARNHICGMIGNGV-NDAPALKKADIG-IAVAD----ATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 250 K~~iV~~lq~~g~~v~~iGDG~-ND~~al~~AdvG-Ia~~~----~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
=..+++.+.-....|+||||.. +|+.+-+.||+. +.+-+ ........+|+++. ++..+..+|.
T Consensus 170 ~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~--~l~eL~~ll~ 238 (247)
T d2gfha1 170 FYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVS--SVLELPALLQ 238 (247)
T ss_dssp HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEES--SGGGHHHHHH
T ss_pred HHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEEC--CHHHHHHHHH
Confidence 1334455544456799999996 899999999996 54421 12222345688875 4777777776
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.72 E-value=0.0016 Score=58.10 Aligned_cols=145 Identities=18% Similarity=0.226 Sum_probs=90.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccC-----Cch-hhh------hhcCChhHHhh
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSG-----QDR-DES------IVALPVDELIE 237 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~-----~~~-~~~------~~~~~~~~~~~ 237 (450)
+-||+.++++.+++. ...+++|---.+-..++|..+|++.+.+...+-.. .+. ++. +...+..++.+
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~eel~e 160 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELFR 160 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred ecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCceeecccccccccCCChHHHHHHHHHhhhccCccHHHHHH
Confidence 458999999999877 67777777777889999999999754322111110 001 110 11111122211
Q ss_pred hcc-cee---------ec---ChhhHHHHHHHHhhc-C-CEEEEecCCCCChHhHhhCCe--eEEec-cchHHHhhccCE
Q 013069 238 KAD-GFA---------GV---FPEHKYEIVKHLQAR-N-HICGMIGNGVNDAPALKKADI--GIAVA-DATDAARSAADI 299 (450)
Q Consensus 238 ~~~-v~a---------~~---~P~~K~~iV~~lq~~-g-~~v~~iGDG~ND~~al~~Adv--GIa~~-~~~~~a~~aaDi 299 (450)
..+ +|. .+ --..|..+++..-.. + ...++|||++.|+.||+.|.= |++++ ||.+-+...||+
T Consensus 161 ~~d~~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Yal~eA~V 240 (308)
T d1y8aa1 161 KLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYALKHADV 240 (308)
T ss_dssp HHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHHHHTTCSE
T ss_pred HHHHHhccchHhhHHhhhcccCCchhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecCccccccccce
Confidence 111 111 11 124566665544322 1 224889999999999997643 66666 788888889999
Q ss_pred EecCCCchHHHHHHHH
Q 013069 300 VLTEPGLNVIITAVLI 315 (450)
Q Consensus 300 vl~~~~l~~i~~~I~~ 315 (450)
.+.+++...+..++..
T Consensus 241 aiiS~~~~a~~~i~dl 256 (308)
T d1y8aa1 241 VIISPTAMSEAKVIEL 256 (308)
T ss_dssp EEECSSTHHHHHHHHH
T ss_pred EEeccchhHHHHHHHH
Confidence 9999998888777764
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.67 E-value=0.0024 Score=54.63 Aligned_cols=108 Identities=14% Similarity=0.128 Sum_probs=69.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccce-eecCh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF-AGVFP 247 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~-a~~~P 247 (450)
++.+++.+.++.|++.|+++.++|+-.... .+..+.+|+.... ..++.+. .++ ..-.|
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~-~~~l~~~~l~~~f--d~i~~~~------------------~~~~~KP~p 137 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQV-LEILEKTSIAAYF--TEVVTSS------------------SGFKRKPNP 137 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHH-HHHHHHTTCGGGE--EEEECGG------------------GCCCCTTSC
T ss_pred cccchhHHHHHHHHhhhccccccccCccch-hhhhhhhcccccc--ccccccc------------------cccccCCCH
Confidence 467999999999999999999999976654 4567788875210 0011000 001 11122
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCE
Q 013069 248 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADI 299 (450)
Q Consensus 248 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDi 299 (450)
+--..+.+.+.- ..++||||..+|+.+-+.||+-...-+.....++..||
T Consensus 138 ~~~~~~~~~~~~--~~~l~vgDs~~Di~aA~~aG~~~i~v~~~~~~~~~~d~ 187 (187)
T d2fi1a1 138 ESMLYLREKYQI--SSGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLDI 187 (187)
T ss_dssp HHHHHHHHHTTC--SSEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHTC
T ss_pred HHHHHHHHHcCC--CCeEEEeCCHHHHHHHHHcCCEEEEECCCCChHhhcCC
Confidence 222334444432 34899999999999999999885554555666665553
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=96.50 E-value=0.00013 Score=60.56 Aligned_cols=107 Identities=13% Similarity=0.068 Sum_probs=60.6
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecC
Q 013069 167 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 246 (450)
Q Consensus 167 ~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 246 (450)
++.+.+++.+.++.|++.|++++++||.+......+.+.++.... ....+.............--.+-.
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~d 102 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRK-----------WVEDIAGVPLVMQCQREQGDTRKD 102 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHH-----------HHHHTTCCCCSEEEECCTTCCSCH
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhh-----------hhhhcCCCcEEEeecccccccCCc
Confidence 578899999999999999999999999874221111111100000 000000000000000000001112
Q ss_pred hhhHHHHHHHHhhc-CCEEEEecCCCCChHhHhhCCeeE
Q 013069 247 PEHKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIGI 284 (450)
Q Consensus 247 P~~K~~iV~~lq~~-g~~v~~iGDG~ND~~al~~AdvGI 284 (450)
+.-|..+.+.+... ..+++|+||...|+.|.+.+++-.
T Consensus 103 ~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~ 141 (149)
T d1ltqa1 103 DVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVEC 141 (149)
T ss_dssp HHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCE
T ss_pred hHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCcE
Confidence 34577777776655 456788999999999999999863
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=96.43 E-value=0.0017 Score=57.19 Aligned_cols=91 Identities=16% Similarity=0.241 Sum_probs=64.2
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcH----HHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeec
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQL----AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 245 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~----~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~ 245 (450)
+.+++.+.++.+++.|++|+.+||+.. .+++++-+.+|++........+.+.+.
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~~---------------------- 144 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKP---------------------- 144 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCCT----------------------
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCCC----------------------
Confidence 567999999999999999999999864 566777777898643322222222111
Q ss_pred ChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCe-eEEe
Q 013069 246 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAV 286 (450)
Q Consensus 246 ~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~Adv-GIa~ 286 (450)
....|...|+. ..+++++||..+|..+-..|++ +|.+
T Consensus 145 ~K~~rr~~Ik~----y~I~l~~GD~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 145 GQNTKSQWLQD----KNIRIFYGDSDNDITAARDVGARGIRI 182 (209)
T ss_dssp TCCCSHHHHHH----TTEEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred CchHHHHHHHH----cCeEEEecCCHHHHhHHHHcCCCceEe
Confidence 11235555543 5689999999999998888884 5655
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=95.78 E-value=0.0052 Score=53.40 Aligned_cols=111 Identities=6% Similarity=0.012 Sum_probs=69.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++-|++.+.++.|++.|+++.++|+... +....+..|+.... + .++.+.+. .+..-.|+
T Consensus 91 ~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f-~-~i~~~~~~-----------------~~~KP~~~ 149 (221)
T d1o08a_ 91 DVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYF-D-AIADPAEV-----------------AASKPAPD 149 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGC-S-EECCTTTS-----------------SSCTTSTH
T ss_pred cccCCceeccccccccccceEEEeecch--hhHHHHhhcccccc-c-cccccccc-----------------cccccChH
Confidence 4678999999999999999999999765 46677778875311 0 01111000 01122222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCe-eEEeccchHHHhhccCEEec
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVADATDAARSAADIVLT 302 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~Adv-GIa~~~~~~~a~~aaDivl~ 302 (450)
-=..+.+.+.-....|+||||..+|+.+-+.|++ .|+++.+ .....++.++.
T Consensus 150 ~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~~--~~~~~~~~~~~ 202 (221)
T d1o08a_ 150 IFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRP--EDLGDDIVIVP 202 (221)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCH--HHHCSSSEEES
T ss_pred HHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEECCh--hhcccccEEcC
Confidence 2233445554455679999999999999999997 4555432 23344565553
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.41 E-value=0.012 Score=50.86 Aligned_cols=104 Identities=9% Similarity=0.029 Sum_probs=65.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCC----cHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeec
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGD----QLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 245 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD----~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~ 245 (450)
+.+++.+.++.|++.|+++.++|+- ............|+..-. + .++.. + + .....-
T Consensus 98 ~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~f-d-~i~~s-~-----------~-----~~~~KP 158 (222)
T d1cr6a1 98 INRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHF-D-FLIES-C-----------Q-----VGMIKP 158 (222)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGC-S-EEEEH-H-----------H-----HSCCTT
T ss_pred CCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhh-c-eeeeh-h-----------h-----ccCCCC
Confidence 6799999999999999999999963 233344444455543100 0 00000 0 0 001122
Q ss_pred ChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCe-eEEeccchHH
Q 013069 246 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVADATDA 292 (450)
Q Consensus 246 ~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~Adv-GIa~~~~~~~ 292 (450)
.|+--..+++.++-....|+||||..+|+.+-+.||+ +|.+.++.+.
T Consensus 159 ~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~ 206 (222)
T d1cr6a1 159 EPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVHNTASA 206 (222)
T ss_dssp CHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECCSSSHH
T ss_pred ChHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEECCcchH
Confidence 3444455667776667779999999999999999997 5555444443
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=95.33 E-value=0.0037 Score=56.13 Aligned_cols=36 Identities=17% Similarity=0.217 Sum_probs=28.9
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHh
Q 013069 171 IHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL 206 (450)
Q Consensus 171 r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~l 206 (450)
=+++.++|+.|++.|++++++|+....+...+++++
T Consensus 20 i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 20 IPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred CccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 378899999999999999999987765556555543
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=95.11 E-value=0.017 Score=49.95 Aligned_cols=124 Identities=10% Similarity=0.097 Sum_probs=74.7
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhh
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 249 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 249 (450)
+.+++.+.+++|+ .+..++|+-....+..+-+.+|+..... ..+..+.+.. ...+.-.|+-
T Consensus 86 ~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f~-~~~~~~~~~~---------------~~~~KP~~~~ 146 (222)
T d2fdra1 86 IIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYFA-PHIYSAKDLG---------------ADRVKPKPDI 146 (222)
T ss_dssp BCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGTT-TCEEEHHHHC---------------TTCCTTSSHH
T ss_pred hhhhHHHHhhhcc---ccceeeeecchhhhhhhhcccccccccc-eeeccccccc---------------ccccccCHHH
Confidence 5778887777664 5567999999999999999999863210 0010000000 0011112222
Q ss_pred HHHHHHHHhhcCCEEEEecCCCCChHhHhhCCee-EEeccch-------HH-HhhccCEEecCCCchHHHHHHH
Q 013069 250 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADAT-------DA-ARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 250 K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvG-Ia~~~~~-------~~-a~~aaDivl~~~~l~~i~~~I~ 314 (450)
=....+.+.-....++||||+.+|+.+-+.|++- |++..+. +. ...-+|+++.+ +..+..+|.
T Consensus 147 ~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~--l~eL~~ll~ 218 (222)
T d2fdra1 147 FLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISR--MQDLPAVIA 218 (222)
T ss_dssp HHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESC--GGGHHHHHH
T ss_pred HHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECC--HHHHHHHHH
Confidence 2344555555567899999999999999999974 4454321 11 22348999854 666655553
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=95.01 E-value=0.014 Score=50.28 Aligned_cols=122 Identities=11% Similarity=0.105 Sum_probs=79.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
.+.+++.++++.++..|+++.++|+-.........+..++..-. ..++...+ .....-.|+
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~f--d~~~~s~~-----------------~~~~KP~p~ 153 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF--DHLLSVDP-----------------VQVYKPDNR 153 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEESGG-----------------GTCCTTSHH
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccc--cceeeeee-----------------eeccccHHH
Confidence 35689999999999999999999999999888888887774210 00000000 001122232
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEE-ec---cchHHHhhccCEEecCCCchHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-VA---DATDAARSAADIVLTEPGLNVIIT 311 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa-~~---~~~~~a~~aaDivl~~~~l~~i~~ 311 (450)
-=..+++.+.-....|+||||..+|+.+-+.||+-.. +. ...+.....+|+++. ++..+++
T Consensus 154 ~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~--~l~el~~ 218 (220)
T d1zrna_ 154 VYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVT--SLRAVVE 218 (220)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEES--SHHHHHT
T ss_pred HHHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEEC--CHHHHHh
Confidence 2234556665556679999999999999999998754 32 222233445788874 4766654
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=94.87 E-value=0.015 Score=51.05 Aligned_cols=109 Identities=18% Similarity=0.088 Sum_probs=58.7
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCc--------HHH-------HHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhH
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQ--------LAI-------AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 234 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~--------~~~-------a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~ 234 (450)
+-|++.++|+.|+++|+++.++|.-. ... .....+..|+....+........... .
T Consensus 49 l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~---~------ 119 (209)
T d2o2xa1 49 LRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVG---P------ 119 (209)
T ss_dssp BCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCS---T------
T ss_pred ecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccccceEEEecccccccc---c------
Confidence 56899999999999999999999522 011 11222233332110000000000000 0
Q ss_pred HhhhccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCe-eEEec
Q 013069 235 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVA 287 (450)
Q Consensus 235 ~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~Adv-GIa~~ 287 (450)
.....+.+..-.|.--..+++.+.-....+.||||..+|..|=+.|++ +|.+.
T Consensus 120 ~~~~~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~ 173 (209)
T d2o2xa1 120 LAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLV 173 (209)
T ss_dssp TCCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEE
T ss_pred ccccccccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEe
Confidence 000000011223333345555555555679999999999999999998 55554
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=94.80 E-value=0.035 Score=49.47 Aligned_cols=61 Identities=23% Similarity=0.300 Sum_probs=40.7
Q ss_pred HHHHHHHhhcCCEEEEecCCC-CChHhHhhCCe-eEEecc--c-hHHHhh---ccCEEecCCCchHHHHHH
Q 013069 251 YEIVKHLQARNHICGMIGNGV-NDAPALKKADI-GIAVAD--A-TDAARS---AADIVLTEPGLNVIITAV 313 (450)
Q Consensus 251 ~~iV~~lq~~g~~v~~iGDG~-ND~~al~~Adv-GIa~~~--~-~~~a~~---aaDivl~~~~l~~i~~~I 313 (450)
..+.+.+.-....++||||.. +|+.+-+.|++ +|.+.. . ...... .+|+++. ++..+.++|
T Consensus 192 ~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~--~l~eL~~~l 260 (261)
T d1vjra_ 192 DVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFK--NLGELAKAV 260 (261)
T ss_dssp HHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEES--SHHHHHHHH
T ss_pred HHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEEC--CHHHHHHHh
Confidence 344555555567799999996 69999999997 566532 1 222222 3488885 587777765
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=94.62 E-value=0.018 Score=51.38 Aligned_cols=43 Identities=14% Similarity=0.098 Sum_probs=31.3
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCc---HHHHHHHHHHhCCC
Q 013069 167 FDPPIHDSAETIRRALSLGLGVKMITGDQ---LAIAKETGRRLGMG 209 (450)
Q Consensus 167 ~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~---~~~a~~ia~~lgi~ 209 (450)
.+.+=+++.++|+.|+++|++++++|+.. .....+.-+.+|+.
T Consensus 17 ~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~ 62 (250)
T d2c4na1 17 DNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp TTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred CCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccc
Confidence 34444789999999999999999998544 44444445567764
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=93.36 E-value=0.081 Score=46.93 Aligned_cols=57 Identities=23% Similarity=0.283 Sum_probs=37.6
Q ss_pred hhhHHHHHHHHhhcCCEEEEecCCCC-ChHhHhhCCe-eEEeccc---hHHHhhc---cCEEecC
Q 013069 247 PEHKYEIVKHLQARNHICGMIGNGVN-DAPALKKADI-GIAVADA---TDAARSA---ADIVLTE 303 (450)
Q Consensus 247 P~~K~~iV~~lq~~g~~v~~iGDG~N-D~~al~~Adv-GIa~~~~---~~~a~~a---aDivl~~ 303 (450)
|+--..+++.++-....|+||||..+ |+.+-+.|++ +|.+..| .+..... .|+++.+
T Consensus 183 p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~s 247 (253)
T d1wvia_ 183 AVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSS 247 (253)
T ss_dssp HHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESC
T ss_pred cccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECC
Confidence 33334566666656678999999976 9999999999 7776421 2222222 3888744
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.76 E-value=0.033 Score=47.42 Aligned_cols=101 Identities=10% Similarity=0.031 Sum_probs=58.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHH----HHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeec
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAK----ETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 245 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~----~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~ 245 (450)
+.+++.+.+..|++.|++++++|........ ......++..- . ..++... + .....-
T Consensus 100 ~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~-f-d~i~~s~------------~-----~~~~KP 160 (225)
T d1zd3a1 100 INRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMH-F-DFLIESC------------Q-----VGMVKP 160 (225)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTT-S-SEEEEHH------------H-----HTCCTT
T ss_pred CCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhh-c-cEEEecc------------c-----cccchh
Confidence 6789999999999999999999975432221 11222222100 0 0000000 0 001111
Q ss_pred ChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCe-eEEeccc
Q 013069 246 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVADA 289 (450)
Q Consensus 246 ~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~Adv-GIa~~~~ 289 (450)
.|+-=..+++.+.-....++||||...|+.+-+.+|+ +|.+.++
T Consensus 161 ~~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~ 205 (225)
T d1zd3a1 161 EPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDT 205 (225)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSSH
T ss_pred HHHHHHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEECCc
Confidence 2222234555555555678999999999999999999 5556443
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=92.51 E-value=0.011 Score=49.53 Aligned_cols=25 Identities=16% Similarity=0.100 Sum_probs=23.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCC
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGD 194 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD 194 (450)
+-|++.++|+.|++.|++++++|..
T Consensus 31 ~~pgv~e~L~~L~~~g~~l~i~TNq 55 (161)
T d2fpwa1 31 FEPGVIPQLLKLQKAGYKLVMITNQ 55 (161)
T ss_dssp BCTTHHHHHHHHHHTTEEEEEEEEC
T ss_pred ECccHHHHHHHHHHcCCceeeeccc
Confidence 4689999999999999999999974
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=92.29 E-value=0.21 Score=43.14 Aligned_cols=94 Identities=11% Similarity=0.109 Sum_probs=61.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.+++++|+ |+.+.++|..+...+....+..|+.... ..++.+.+. ....-.|+
T Consensus 93 ~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~f--d~v~~s~~~-----------------~~~KP~p~ 151 (245)
T d1qq5a_ 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF--DAVISVDAK-----------------RVFKPHPD 151 (245)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGG-----------------TCCTTSHH
T ss_pred ccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhccccccc--ccccccccc-----------------cccCccHH
Confidence 46688999998885 6788999999998888888888875211 011111000 01111222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCee
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 283 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvG 283 (450)
-=..+++.+.-....|+||||..+|+.+=+.||+-
T Consensus 152 ~f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~ 186 (245)
T d1qq5a_ 152 SYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFS 186 (245)
T ss_dssp HHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCE
T ss_pred HHHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCe
Confidence 22345555555556799999999999999999975
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=88.20 E-value=0.025 Score=46.93 Aligned_cols=94 Identities=9% Similarity=0.022 Sum_probs=56.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHh-CCCCCCCCCccccCCchhhhhhcCChhHHhhhcc-cee---
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL-GMGTNMYPSSALSGQDRDESIVALPVDELIEKAD-GFA--- 243 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~l-gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-v~a--- 243 (450)
++.+++.+.+..++..|+.+.++|+-....+...-... |+ ....+ +++
T Consensus 84 ~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l---------------------------~~~fd~v~~s~~ 136 (197)
T d2b0ca1 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEI---------------------------RDAADHIYLSQD 136 (197)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHH---------------------------HHHCSEEEEHHH
T ss_pred ccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccc---------------------------hhhccceeeccc
Confidence 36789999999999999999999875432211110000 00 00001 111
Q ss_pred ----ecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCe-eEEeccc
Q 013069 244 ----GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVADA 289 (450)
Q Consensus 244 ----~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~Adv-GIa~~~~ 289 (450)
.-.|+-=..+.+.+.-....|+||||..+|+.+-+.||+ +|.+.+.
T Consensus 137 ~~~~Kp~~~~~~~~~~~~~~~~~~~l~vgDs~~di~~A~~aG~~ti~v~~~ 187 (197)
T d2b0ca1 137 LGMRKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDK 187 (197)
T ss_dssp HTCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCST
T ss_pred ccccccchHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHcCCEEEEECCC
Confidence 112222233445554455779999999999999999997 5656543
|