Citrus Sinensis ID: 013242
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 447 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SU58 | 960 | ATPase 4, plasma membrane | yes | no | 0.733 | 0.341 | 0.841 | 1e-163 | |
| P23980 | 704 | Plasma membrane ATPase 2 | N/A | no | 0.682 | 0.433 | 0.832 | 1e-162 | |
| Q9LV11 | 956 | ATPase 11, plasma membran | no | no | 0.733 | 0.343 | 0.832 | 1e-162 | |
| Q08435 | 957 | Plasma membrane ATPase 1 | N/A | no | 0.686 | 0.320 | 0.835 | 1e-162 | |
| Q08436 | 956 | Plasma membrane ATPase 3 | N/A | no | 0.733 | 0.343 | 0.838 | 1e-161 | |
| P22180 | 956 | Plasma membrane ATPase 1 | N/A | no | 0.733 | 0.343 | 0.826 | 1e-160 | |
| Q7XPY2 | 951 | Plasma membrane ATPase OS | no | no | 0.780 | 0.366 | 0.715 | 1e-149 | |
| Q9SJB3 | 949 | ATPase 5, plasma membrane | no | no | 0.731 | 0.344 | 0.768 | 1e-148 | |
| P83970 | 951 | Plasma membrane ATPase OS | N/A | no | 0.675 | 0.317 | 0.768 | 1e-147 | |
| P20431 | 949 | ATPase 3, plasma membrane | no | no | 0.684 | 0.322 | 0.740 | 1e-145 |
| >sp|Q9SU58|PMA4_ARATH ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=AHA4 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 575 bits (1481), Expect = e-163, Method: Compositional matrix adjust.
Identities = 276/328 (84%), Positives = 304/328 (92%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGML 60
MDVLC DKTGTLTLNKLTVDKNLIE+F GVDADTVVLMAARAS++EN D IDAAIVGML
Sbjct: 331 MDVLCSDKTGTLTLNKLTVDKNLIEVFMKGVDADTVVLMAARASRLENQDAIDAAIVGML 390
Query: 61 ADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRK 120
ADPK+ARA IQEVHFLPF+PT KRTALTYID+EG HRV+KG+PEQILNL HNKS+I R+
Sbjct: 391 ADPKDARAGIQEVHFLPFNPTDKRTALTYIDNEGNTHRVSKGAPEQILNLAHNKSEIERR 450
Query: 121 VNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALS 180
V+AVI+KFAERGLRSLAVAYQ+VPEG K+S+G PWQF+GL+PLFDPP HDSAETIRRAL+
Sbjct: 451 VHAVIDKFAERGLRSLAVAYQDVPEGRKDSAGGPWQFVGLMPLFDPPRHDSAETIRRALN 510
Query: 181 LGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240
LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ++DESIVALPVDELIEKADGFA
Sbjct: 511 LGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFA 570
Query: 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 300
GVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAARSA+DIVLTE
Sbjct: 571 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 630
Query: 301 PGLNVIITAVLISRAIFQRMRNYMVRGI 328
PGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 631 PGLSVIISAVLTSRAIFQRMKNYTIYAV 658
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 6 |
| >sp|P23980|PMA2_SOLLC Plasma membrane ATPase 2 (Fragment) OS=Solanum lycopersicum GN=LHA2 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 571 bits (1472), Expect = e-162, Method: Compositional matrix adjust.
Identities = 273/328 (83%), Positives = 298/328 (90%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGML 60
MDVLC DKTGTLTLNKLTVDKNL+E+FA GVDADTVVLMAARAS+ EN D ID AIVGML
Sbjct: 75 MDVLCSDKTGTLTLNKLTVDKNLVEVFAKGVDADTVVLMAARASRTENQDAIDTAIVGML 134
Query: 61 ADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRK 120
ADPKEARA I+E+HFLPF+PT KRTALTY+D EGKMHRV+KG+PEQILNL HNKS I R+
Sbjct: 135 ADPKEARAGIREIHFLPFNPTDKRTALTYLDGEGKMHRVSKGAPEQILNLAHNKSDIERR 194
Query: 121 VNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALS 180
V+ VI+KFAERGLRSL VAYQEVPEG KESSG PWQFIGL+PLFDPP HDSAETIRRAL+
Sbjct: 195 VHTVIDKFAERGLRSLGVAYQEVPEGRKESSGGPWQFIGLLPLFDPPRHDSAETIRRALN 254
Query: 181 LGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240
LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ +DESI +LP+DELIEKADGFA
Sbjct: 255 LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQTKDESIASLPIDELIEKADGFA 314
Query: 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 300
GVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAV DATDAARSA+DIVLTE
Sbjct: 315 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVDDATDAARSASDIVLTE 374
Query: 301 PGLNVIITAVLISRAIFQRMRNYMVRGI 328
PGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 375 PGLSVIISAVLTSRAIFQRMKNYTIYAV 402
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Solanum lycopersicum (taxid: 4081) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9LV11|PMA11_ARATH ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=AHA11 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 570 bits (1470), Expect = e-162, Method: Compositional matrix adjust.
Identities = 273/328 (83%), Positives = 305/328 (92%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGML 60
MDVLC DKTGTLTLNKLTVDKNLIE+F GVDADTVVLMAA+AS++EN D IDAAIVGML
Sbjct: 327 MDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRLENQDAIDAAIVGML 386
Query: 61 ADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRK 120
ADPKEARA ++EVHFLPF+PT KRTALTYIDS+GKMHRV+KG+PEQILNL HN+++I R+
Sbjct: 387 ADPKEARAGVREVHFLPFNPTDKRTALTYIDSDGKMHRVSKGAPEQILNLAHNRAEIERR 446
Query: 121 VNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALS 180
V+AVI+KFAERGLRSLAVAYQEVPEG+KES+G PWQF+GL+PLFDPP HDSAETIRRAL+
Sbjct: 447 VHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGPWQFMGLMPLFDPPRHDSAETIRRALN 506
Query: 181 LGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240
LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ +DESI ALP+D+LIEKADGFA
Sbjct: 507 LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQHKDESIGALPIDDLIEKADGFA 566
Query: 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 300
GVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAARSA+DIVLTE
Sbjct: 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 626
Query: 301 PGLNVIITAVLISRAIFQRMRNYMVRGI 328
PGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 627 PGLSVIISAVLTSRAIFQRMKNYTIYAV 654
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q08435|PMA1_NICPL Plasma membrane ATPase 1 OS=Nicotiana plumbaginifolia GN=PMA1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 570 bits (1468), Expect = e-162, Method: Compositional matrix adjust.
Identities = 274/328 (83%), Positives = 299/328 (91%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGML 60
MDVLC DKTGTLTLNKLTVDKNLIE+FA GVDAD VVLMAARAS+ EN D IDAAIVGML
Sbjct: 328 MDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDADMVVLMAARASRTENQDAIDAAIVGML 387
Query: 61 ADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRK 120
ADPKEARA I+E+HFLPF+PT KRTALTY+D EGKMHRV+KG+PEQILNL HNKS I R+
Sbjct: 388 ADPKEARAGIREIHFLPFNPTDKRTALTYLDGEGKMHRVSKGAPEQILNLAHNKSDIERR 447
Query: 121 VNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALS 180
V+AVI+KFAERGLRSL VAYQEVPEG KES+G PWQFIGL+PLFDPP HDSAETIRRAL+
Sbjct: 448 VHAVIDKFAERGLRSLGVAYQEVPEGRKESAGGPWQFIGLLPLFDPPRHDSAETIRRALN 507
Query: 181 LGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240
LG+ VKM+TGDQLAI KETGRRLGMGTNMYPSSAL GQ +DESI ALP+DELIEKADGFA
Sbjct: 508 LGVNVKMVTGDQLAIGKETGRRLGMGTNMYPSSALLGQTKDESISALPIDELIEKADGFA 567
Query: 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 300
GVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAV DATDAARSA+DIVLTE
Sbjct: 568 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVDDATDAARSASDIVLTE 627
Query: 301 PGLNVIITAVLISRAIFQRMRNYMVRGI 328
PGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 628 PGLSVIISAVLTSRAIFQRMKNYTIYAV 655
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Nicotiana plumbaginifolia (taxid: 4092) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q08436|PMA3_NICPL Plasma membrane ATPase 3 OS=Nicotiana plumbaginifolia GN=PMA3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 568 bits (1463), Expect = e-161, Method: Compositional matrix adjust.
Identities = 275/328 (83%), Positives = 299/328 (91%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGML 60
MDVLC DKTGTLTLNKLTVDK LIE+FA GVDADTVVLMAARAS+ EN D IDAAIVGML
Sbjct: 327 MDVLCSDKTGTLTLNKLTVDKYLIEVFARGVDADTVVLMAARASRTENQDAIDAAIVGML 386
Query: 61 ADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRK 120
ADPKEARA I+E+HFLPF+PT KRTALTY+D EGKMHRV+KG+PEQIL+L HNKS I R+
Sbjct: 387 ADPKEARAGIREIHFLPFNPTDKRTALTYLDGEGKMHRVSKGAPEQILHLAHNKSDIERR 446
Query: 121 VNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALS 180
V+AVI+KFAERGLRSLAVAYQEVPEG KES+G PWQFI L+PLFDPP HDSAETIRRAL+
Sbjct: 447 VHAVIDKFAERGLRSLAVAYQEVPEGRKESAGGPWQFIALLPLFDPPRHDSAETIRRALN 506
Query: 181 LGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240
LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ +DESI ALPVDELIEKADGFA
Sbjct: 507 LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQTKDESISALPVDELIEKADGFA 566
Query: 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 300
GVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAV DATDAARSA+DIVLTE
Sbjct: 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVDDATDAARSASDIVLTE 626
Query: 301 PGLNVIITAVLISRAIFQRMRNYMVRGI 328
PGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 627 PGLSVIISAVLTSRAIFQRMKNYTIYAV 654
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Nicotiana plumbaginifolia (taxid: 4092) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P22180|PMA1_SOLLC Plasma membrane ATPase 1 OS=Solanum lycopersicum GN=LHA1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 565 bits (1457), Expect = e-160, Method: Compositional matrix adjust.
Identities = 271/328 (82%), Positives = 297/328 (90%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGML 60
MDVLC DKTGTLTLNKLTVDK LIE+FA G+DADTVVLMAARAS++EN D ID AIVGML
Sbjct: 327 MDVLCSDKTGTLTLNKLTVDKALIEVFAKGIDADTVVLMAARASRIENQDAIDTAIVGML 386
Query: 61 ADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRK 120
ADPKEARA I+E+HFLPF+PT KRTALTY+D EGKMHRV+KG+PEQILNL HNKS I R+
Sbjct: 387 ADPKEARAGIREIHFLPFNPTDKRTALTYLDGEGKMHRVSKGAPEQILNLAHNKSDIERR 446
Query: 121 VNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALS 180
V+ VI+KFAERGLRSL VAYQEVPEG KES+G PWQFI L+PLFDPP HDSAETIRRAL+
Sbjct: 447 VHTVIDKFAERGLRSLGVAYQEVPEGRKESAGGPWQFIALLPLFDPPRHDSAETIRRALN 506
Query: 181 LGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240
LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ +DESI ALP+DELIEKADGFA
Sbjct: 507 LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQTKDESIAALPIDELIEKADGFA 566
Query: 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 300
GVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAV DATDAARSA+DIVLTE
Sbjct: 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVDDATDAARSASDIVLTE 626
Query: 301 PGLNVIITAVLISRAIFQRMRNYMVRGI 328
PGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 627 PGLSVIISAVLTSRAIFQRMKNYTIYAV 654
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Solanum lycopersicum (taxid: 4081) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q7XPY2|PMA1_ORYSJ Plasma membrane ATPase OS=Oryza sativa subsp. japonica GN=Os04g0656100 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 530 bits (1365), Expect = e-149, Method: Compositional matrix adjust.
Identities = 261/365 (71%), Positives = 297/365 (81%), Gaps = 16/365 (4%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGML 60
MDVLC DKTGTLTLNKL+VDKNL+E+F GVD D V+L+AARAS+ EN D IDAA+VGML
Sbjct: 323 MDVLCSDKTGTLTLNKLSVDKNLVEVFTKGVDKDHVLLLAARASRTENQDAIDAAMVGML 382
Query: 61 ADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRK 120
ADPKEARA I+EVHFLPF+P KRTALTYID++G HR +KG+PEQIL L + K + RK
Sbjct: 383 ADPKEARAGIREVHFLPFNPVDKRTALTYIDADGNWHRASKGAPEQILTLCNCKEDVKRK 442
Query: 121 VNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALS 180
V+AVI+K+AERGLRSLAVA QEVPE SKES+G PWQF+GL+PLFDPP HDSAETIR+AL
Sbjct: 443 VHAVIDKYAERGLRSLAVARQEVPEKSKESAGGPWQFVGLLPLFDPPRHDSAETIRKALH 502
Query: 181 LGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240
LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ++D S+ ALPVDELIEKADGFA
Sbjct: 503 LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDASLEALPVDELIEKADGFA 562
Query: 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 300
GVFPEHKYEIVK LQ + HI GM G+GVNDAPALKKADIGIAVADATDAARSA+DIVLTE
Sbjct: 563 GVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 622
Query: 301 PGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELNFLFTLDTVIAILQTAFT 360
PGL+VII+AVL SR IFQRM+NY + + T+ V+ L A
Sbjct: 623 PGLSVIISAVLTSRCIFQRMKNYTIYAVS----------------ITIRIVLGFLLIALI 666
Query: 361 SKKDF 365
K DF
Sbjct: 667 WKYDF 671
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9SJB3|PMA5_ARATH ATPase 5, plasma membrane-type OS=Arabidopsis thaliana GN=AHA5 PE=3 SV=3 | Back alignment and function description |
|---|
Score = 526 bits (1354), Expect = e-148, Method: Compositional matrix adjust.
Identities = 252/328 (76%), Positives = 284/328 (86%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGML 60
MDVLCCDKTGTLTLNKLTVDKNL+E+FA GV + V L+AARAS++EN D IDAAIVGML
Sbjct: 323 MDVLCCDKTGTLTLNKLTVDKNLVEVFAKGVGKEHVFLLAARASRIENQDAIDAAIVGML 382
Query: 61 ADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRK 120
ADPKEARA ++EVHF PF+P KRTALTY+DS+G HR +KG+PEQILNL + K + RK
Sbjct: 383 ADPKEARAGVREVHFFPFNPVDKRTALTYVDSDGNWHRASKGAPEQILNLCNCKEDVRRK 442
Query: 121 VNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALS 180
V+ VI+KFAERGLRSLAVA QEV E K++ G PWQ +GL+PLFDPP HDSAETIRRAL+
Sbjct: 443 VHGVIDKFAERGLRSLAVARQEVLEKKKDAPGGPWQLVGLLPLFDPPRHDSAETIRRALN 502
Query: 181 LGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240
LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ +D S+ ALPVDELIEKADGFA
Sbjct: 503 LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQVKDSSLGALPVDELIEKADGFA 562
Query: 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 300
GVFPEHKYEIV LQ RNHICGM G+GVNDAPALKKADIGIAV DATDAAR A+DIVLTE
Sbjct: 563 GVFPEHKYEIVHRLQQRNHICGMTGDGVNDAPALKKADIGIAVVDATDAARGASDIVLTE 622
Query: 301 PGLNVIITAVLISRAIFQRMRNYMVRGI 328
PGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 623 PGLSVIISAVLTSRAIFQRMKNYTIYAV 650
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P83970|PMA1_WHEAT Plasma membrane ATPase OS=Triticum aestivum GN=ha1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 523 bits (1347), Expect = e-147, Method: Compositional matrix adjust.
Identities = 252/328 (76%), Positives = 286/328 (87%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGML 60
MDVLC DKTGTLTLNKL+VDKNL+E+FA GVD + V+L+AARAS+VEN D IDA +VGML
Sbjct: 323 MDVLCSDKTGTLTLNKLSVDKNLVEVFAKGVDKEHVLLLAARASRVENQDAIDACMVGML 382
Query: 61 ADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRK 120
ADPKEARA I+EVHFLPF+PT KRTALTYID+EG HR +KG+PEQI+ L + K + RK
Sbjct: 383 ADPKEARAGIREVHFLPFNPTDKRTALTYIDAEGNWHRASKGAPEQIITLCNCKEDVKRK 442
Query: 121 VNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALS 180
V++VI K+AERGLRSLAVA QEVPE SK+S G PWQFIGL+PLFDPP HDSAETIR+AL
Sbjct: 443 VHSVIEKYAERGLRSLAVARQEVPEKSKDSPGGPWQFIGLLPLFDPPRHDSAETIRKALV 502
Query: 181 LGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240
LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ +D S+ +LPVDELIEKADGFA
Sbjct: 503 LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQSKDGSLESLPVDELIEKADGFA 562
Query: 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 300
GVFPEHKYEIVK LQ + HI GM G+GVNDAPALKKADIGIAV DATDAARSA+DIVLTE
Sbjct: 563 GVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKADIGIAVDDATDAARSASDIVLTE 622
Query: 301 PGLNVIITAVLISRAIFQRMRNYMVRGI 328
PGL+VII+AVL SR IFQRM+NY + +
Sbjct: 623 PGLSVIISAVLTSRCIFQRMKNYTIYAV 650
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Triticum aestivum (taxid: 4565) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P20431|PMA3_ARATH ATPase 3, plasma membrane-type OS=Arabidopsis thaliana GN=AHA3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 516 bits (1329), Expect = e-145, Method: Compositional matrix adjust.
Identities = 243/328 (74%), Positives = 290/328 (88%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGML 60
MDVLC DKTGTLTLNKL+VDKNLIE++ GV+ D V+L AARAS+VEN D IDAA+VGML
Sbjct: 324 MDVLCSDKTGTLTLNKLSVDKNLIEVYCKGVEKDEVLLFAARASRVENQDAIDAAMVGML 383
Query: 61 ADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRK 120
ADPKEARA I+E+HFLPF+P KRTALT+IDS G HRV+KG+PEQIL+L + ++ + ++
Sbjct: 384 ADPKEARAGIREIHFLPFNPVDKRTALTFIDSNGNWHRVSKGAPEQILDLCNARADLRKR 443
Query: 121 VNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALS 180
V++ I+K+AERGLRSLAV+ Q VPE +KESSGSPW+F+G++PLFDPP HDSAETIRRAL
Sbjct: 444 VHSTIDKYAERGLRSLAVSRQTVPEKTKESSGSPWEFVGVLPLFDPPRHDSAETIRRALD 503
Query: 181 LGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240
LG+ VKMITGDQLAIAKETGRRLGMG+NMYPSS+L G+ +DE++ +PV++LIEKADGFA
Sbjct: 504 LGVNVKMITGDQLAIAKETGRRLGMGSNMYPSSSLLGKHKDEAMAHIPVEDLIEKADGFA 563
Query: 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 300
GVFPEHKYEIVK LQ R HICGM G+GVNDAPALKKADIGIAVADATDAAR A+DIVLTE
Sbjct: 564 GVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTE 623
Query: 301 PGLNVIITAVLISRAIFQRMRNYMVRGI 328
PGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 624 PGLSVIISAVLTSRAIFQRMKNYTIYAV 651
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 447 | ||||||
| 449440750 | 959 | PREDICTED: ATPase 4, plasma membrane-typ | 0.733 | 0.342 | 0.850 | 1e-162 | |
| 31580855 | 956 | plasma membrane H+-ATPase [Sesbania rost | 0.733 | 0.343 | 0.844 | 1e-162 | |
| 225456641 | 956 | PREDICTED: ATPase 11, plasma membrane-ty | 0.814 | 0.380 | 0.778 | 1e-162 | |
| 224121558 | 966 | autoinhibited H+ ATPase [Populus trichoc | 0.682 | 0.315 | 0.850 | 1e-162 | |
| 449528800 | 959 | PREDICTED: LOW QUALITY PROTEIN: ATPase 4 | 0.733 | 0.342 | 0.847 | 1e-162 | |
| 6759599 | 956 | plasma membrane H+ ATPase [Prunus persic | 0.682 | 0.319 | 0.841 | 1e-162 | |
| 30692952 | 960 | H(+)-ATPase 4 [Arabidopsis thaliana] gi| | 0.733 | 0.341 | 0.841 | 1e-161 | |
| 33943131 | 956 | plasma membrane H+-ATPase [Juglans regia | 0.814 | 0.380 | 0.773 | 1e-161 | |
| 312282347 | 956 | unnamed protein product [Thellungiella h | 0.733 | 0.343 | 0.832 | 1e-161 | |
| 224135653 | 967 | autoinhibited H+ ATPase [Populus trichoc | 0.733 | 0.339 | 0.848 | 1e-161 |
| >gi|449440750|ref|XP_004138147.1| PREDICTED: ATPase 4, plasma membrane-type-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 279/328 (85%), Positives = 302/328 (92%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGML 60
MDVLC DKTGTLTLNKLTVDKNL+E+FA GVD DTVVLMAARAS+ EN D ID AIVGML
Sbjct: 330 MDVLCSDKTGTLTLNKLTVDKNLVEVFAKGVDVDTVVLMAARASRTENQDAIDTAIVGML 389
Query: 61 ADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRK 120
ADPKEARA IQEVHFLPF+PT KRTALTYID EGKMHRV+KG+PEQILNL HNKS+I RK
Sbjct: 390 ADPKEARAGIQEVHFLPFNPTDKRTALTYIDHEGKMHRVSKGAPEQILNLAHNKSEIERK 449
Query: 121 VNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALS 180
V+AVI+KFAERGLRSLAVAYQEVP+G KES+G PWQF+GL+PLFDPP HDSAETIRRAL+
Sbjct: 450 VHAVIDKFAERGLRSLAVAYQEVPDGRKESAGGPWQFVGLLPLFDPPRHDSAETIRRALN 509
Query: 181 LGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240
LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQD+DESI ALPVDELIEKADGFA
Sbjct: 510 LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPVDELIEKADGFA 569
Query: 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 300
GVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAARSA+DIVLTE
Sbjct: 570 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 629
Query: 301 PGLNVIITAVLISRAIFQRMRNYMVRGI 328
PGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 630 PGLSVIISAVLTSRAIFQRMKNYTIYAV 657
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|31580855|dbj|BAC77532.1| plasma membrane H+-ATPase [Sesbania rostrata] | Back alignment and taxonomy information |
|---|
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 277/328 (84%), Positives = 303/328 (92%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGML 60
MDVLC DKTGTLTLNKLTVDKNL+E+FA GVDADTVVLMAARAS++EN D ID AIVGML
Sbjct: 327 MDVLCSDKTGTLTLNKLTVDKNLVEVFAKGVDADTVVLMAARASRLENQDAIDTAIVGML 386
Query: 61 ADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRK 120
ADPKEARA IQEVHFLPF+PT KRTALTYID +GKMHRV+KG+PEQILNL HNK+ I R+
Sbjct: 387 ADPKEARAGIQEVHFLPFNPTDKRTALTYIDQDGKMHRVSKGAPEQILNLAHNKTDIERR 446
Query: 121 VNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALS 180
V+AVI+KFAERGLRSLAVAYQEVP+G KES+G PWQFIGL+PLFDPP HDSAETIRRAL+
Sbjct: 447 VHAVIDKFAERGLRSLAVAYQEVPDGRKESAGGPWQFIGLMPLFDPPRHDSAETIRRALN 506
Query: 181 LGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240
LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQD+DESI ALP+DELIEKADGFA
Sbjct: 507 LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFA 566
Query: 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 300
GVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAARSA+DIVLTE
Sbjct: 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 626
Query: 301 PGLNVIITAVLISRAIFQRMRNYMVRGI 328
PGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 627 PGLSVIISAVLTSRAIFQRMKNYTIYAV 654
|
Source: Sesbania rostrata Species: Sesbania rostrata Genus: Sesbania Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225456641|ref|XP_002270344.1| PREDICTED: ATPase 11, plasma membrane-type [Vitis vinifera] gi|297734039|emb|CBI15286.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 289/371 (77%), Positives = 318/371 (85%), Gaps = 7/371 (1%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGML 60
MDVLC DKTGTLTLNKLTVDKNLIE+FA GVD DTVVLMAARAS++EN D ID AIVGML
Sbjct: 327 MDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDPDTVVLMAARASRIENQDAIDTAIVGML 386
Query: 61 ADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRK 120
ADPKEARA IQEVHFLPF+PT KRTALTYIDSEGKMHRV+KG+PEQILNL NKS+I R+
Sbjct: 387 ADPKEARAGIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLARNKSEIERR 446
Query: 121 VNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALS 180
V+AVI+KFAERGLRSLAVAYQEVP+G KES+G PWQFIGL+PLFDPP HDSAETIRRAL+
Sbjct: 447 VHAVIDKFAERGLRSLAVAYQEVPDGRKESAGGPWQFIGLMPLFDPPRHDSAETIRRALN 506
Query: 181 LGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240
LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ++DESI ALP+DELIEKADGFA
Sbjct: 507 LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDESIAALPIDELIEKADGFA 566
Query: 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 300
GVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAARSA+DIVLTE
Sbjct: 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 626
Query: 301 PGLNVIITAVLISRAIFQRMRNYMVRGID-----GLSSTEFIQVLELNFLFTLDTVIAIL 355
PGL+VII+AVL SRAIFQRM+NY + + L + E +F + +IAIL
Sbjct: 627 PGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWEFDFPPFMVLIIAIL 686
Query: 356 Q--TAFTSKKD 364
T T KD
Sbjct: 687 NDGTIMTISKD 697
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224121558|ref|XP_002318614.1| autoinhibited H+ ATPase [Populus trichocarpa] gi|222859287|gb|EEE96834.1| autoinhibited H+ ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust.
Identities = 279/328 (85%), Positives = 302/328 (92%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGML 60
MDVLC DKTGTLTLNKLTVDKNLIE+FA GVDAD VVLMAARAS++EN D ID AIVGML
Sbjct: 337 MDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDADAVVLMAARASRIENQDAIDTAIVGML 396
Query: 61 ADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRK 120
ADPKEARA IQEVHFLPF+PT KRTALTYIDS GKMHRV+KG+PEQILNL HNKS I R+
Sbjct: 397 ADPKEARAGIQEVHFLPFNPTDKRTALTYIDSGGKMHRVSKGAPEQILNLSHNKSDIERR 456
Query: 121 VNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALS 180
V+AVI+KFAERGLRSLAVAYQEVPEG KES+G PWQFIGL+PLFDPP HDSAETIRRAL+
Sbjct: 457 VHAVIDKFAERGLRSLAVAYQEVPEGRKESAGGPWQFIGLLPLFDPPRHDSAETIRRALN 516
Query: 181 LGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240
LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ++DESI ALP+DELIEKADGFA
Sbjct: 517 LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDESIAALPIDELIEKADGFA 576
Query: 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 300
GVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAARSA+DIVLTE
Sbjct: 577 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 636
Query: 301 PGLNVIITAVLISRAIFQRMRNYMVRGI 328
PGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 637 PGLSVIISAVLTSRAIFQRMKNYTIYAV 664
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449528800|ref|XP_004171391.1| PREDICTED: LOW QUALITY PROTEIN: ATPase 4, plasma membrane-type-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust.
Identities = 278/328 (84%), Positives = 302/328 (92%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGML 60
MDVLC DKTGTLTLNKLTVDKNL+E+FA GVD DTVVLMAARAS+ EN D ID AIVGML
Sbjct: 330 MDVLCSDKTGTLTLNKLTVDKNLVEVFAKGVDVDTVVLMAARASRTENQDAIDTAIVGML 389
Query: 61 ADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRK 120
ADPKEARA IQEVHFLPF+PT KRTALTYID EGKMHRV+KG+PEQILNL HNKS+I RK
Sbjct: 390 ADPKEARAGIQEVHFLPFNPTDKRTALTYIDHEGKMHRVSKGAPEQILNLAHNKSEIERK 449
Query: 121 VNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALS 180
V+AVI+KFAERGLRSLAVAYQEVP+G KES+G PWQF+GL+PLFDPP H+SAETIRRAL+
Sbjct: 450 VHAVIDKFAERGLRSLAVAYQEVPDGRKESAGGPWQFVGLLPLFDPPRHESAETIRRALN 509
Query: 181 LGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240
LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQD+DESI ALPVDELIEKADGFA
Sbjct: 510 LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPVDELIEKADGFA 569
Query: 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 300
GVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAARSA+DIVLTE
Sbjct: 570 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 629
Query: 301 PGLNVIITAVLISRAIFQRMRNYMVRGI 328
PGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 630 PGLSVIISAVLTSRAIFQRMKNYTIYAV 657
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|6759599|emb|CAB69824.1| plasma membrane H+ ATPase [Prunus persica] | Back alignment and taxonomy information |
|---|
Score = 576 bits (1484), Expect = e-162, Method: Compositional matrix adjust.
Identities = 276/328 (84%), Positives = 302/328 (92%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGML 60
MDVLC DKTGTLTLNKLTVDKNLIE+FA G+D DTVVLMAARAS+VEN D ID AIVGML
Sbjct: 327 MDVLCSDKTGTLTLNKLTVDKNLIEVFAKGMDPDTVVLMAARASRVENQDAIDTAIVGML 386
Query: 61 ADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRK 120
ADPKEARA +QE+HFLPF+PT KRTALTY+D +GKMHRV+KG+PEQILNL HNKS I R+
Sbjct: 387 ADPKEARAGVQELHFLPFNPTDKRTALTYLDRDGKMHRVSKGAPEQILNLAHNKSDIERR 446
Query: 121 VNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALS 180
V+AVI+KFAERGLRSLAVAYQEVPEG KES+G PWQF+GL+PLFDPP HDSAETIRRAL
Sbjct: 447 VHAVIDKFAERGLRSLAVAYQEVPEGRKESAGGPWQFVGLMPLFDPPRHDSAETIRRALD 506
Query: 181 LGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240
LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQD+DESIVALP+DELIEKADGFA
Sbjct: 507 LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIVALPIDELIEKADGFA 566
Query: 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 300
GVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAARSA+DIVLTE
Sbjct: 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 626
Query: 301 PGLNVIITAVLISRAIFQRMRNYMVRGI 328
PGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 627 PGLSVIISAVLTSRAIFQRMKNYTIYAV 654
|
Source: Prunus persica Species: Prunus persica Genus: Prunus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|30692952|ref|NP_190378.2| H(+)-ATPase 4 [Arabidopsis thaliana] gi|83305346|sp|Q9SU58.2|PMA4_ARATH RecName: Full=ATPase 4, plasma membrane-type; AltName: Full=Proton pump 4 gi|26451228|dbj|BAC42716.1| putative H+-transporting ATPase [Arabidopsis thaliana] gi|332644829|gb|AEE78350.1| H(+)-ATPase 4 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 276/328 (84%), Positives = 304/328 (92%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGML 60
MDVLC DKTGTLTLNKLTVDKNLIE+F GVDADTVVLMAARAS++EN D IDAAIVGML
Sbjct: 331 MDVLCSDKTGTLTLNKLTVDKNLIEVFMKGVDADTVVLMAARASRLENQDAIDAAIVGML 390
Query: 61 ADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRK 120
ADPK+ARA IQEVHFLPF+PT KRTALTYID+EG HRV+KG+PEQILNL HNKS+I R+
Sbjct: 391 ADPKDARAGIQEVHFLPFNPTDKRTALTYIDNEGNTHRVSKGAPEQILNLAHNKSEIERR 450
Query: 121 VNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALS 180
V+AVI+KFAERGLRSLAVAYQ+VPEG K+S+G PWQF+GL+PLFDPP HDSAETIRRAL+
Sbjct: 451 VHAVIDKFAERGLRSLAVAYQDVPEGRKDSAGGPWQFVGLMPLFDPPRHDSAETIRRALN 510
Query: 181 LGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240
LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ++DESIVALPVDELIEKADGFA
Sbjct: 511 LGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFA 570
Query: 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 300
GVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAARSA+DIVLTE
Sbjct: 571 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 630
Query: 301 PGLNVIITAVLISRAIFQRMRNYMVRGI 328
PGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 631 PGLSVIISAVLTSRAIFQRMKNYTIYAV 658
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|33943131|gb|AAQ55291.1| plasma membrane H+-ATPase [Juglans regia] | Back alignment and taxonomy information |
|---|
Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust.
Identities = 287/371 (77%), Positives = 316/371 (85%), Gaps = 7/371 (1%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGML 60
MDVLC DKTGTLTLNKL+VDK LIE+F GVDAD VVLMAARAS+VEN D ID+AIVGML
Sbjct: 327 MDVLCSDKTGTLTLNKLSVDKALIEVFTKGVDADAVVLMAARASRVENQDAIDSAIVGML 386
Query: 61 ADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRK 120
ADPKEARA IQEVHFLPF+PT KRTALTYID +GKMHRV+KG+PEQILNL HNKS I R+
Sbjct: 387 ADPKEARAGIQEVHFLPFNPTDKRTALTYIDRDGKMHRVSKGAPEQILNLAHNKSDIERR 446
Query: 121 VNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALS 180
V+AVI+KFAERGLRSLAVAYQEVPEG KES+G PWQFIGL+PLFDPP HDSAETIRRAL+
Sbjct: 447 VHAVIDKFAERGLRSLAVAYQEVPEGRKESAGGPWQFIGLMPLFDPPRHDSAETIRRALN 506
Query: 181 LGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240
LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ++DESI ALP+DELIEKADGFA
Sbjct: 507 LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDESIAALPIDELIEKADGFA 566
Query: 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 300
GVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAARSA+DIVLTE
Sbjct: 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 626
Query: 301 PGLNVIITAVLISRAIFQRMRNYMVRGID-----GLSSTEFIQVLELNFLFTLDTVIAIL 355
PGL+VII+AVL SRAIFQRM+NY + + L + E +F + +IAIL
Sbjct: 627 PGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWEFDFPPFMVLIIAIL 686
Query: 356 Q--TAFTSKKD 364
T T KD
Sbjct: 687 NDGTIMTISKD 697
|
Source: Juglans regia Species: Juglans regia Genus: Juglans Family: Juglandaceae Order: Fagales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|312282347|dbj|BAJ34039.1| unnamed protein product [Thellungiella halophila] | Back alignment and taxonomy information |
|---|
Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust.
Identities = 273/328 (83%), Positives = 305/328 (92%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGML 60
MDVLC DKTGTLTLNKLTVDKNLIE+F GVDADTVVLMAA+AS++EN D IDAAIVGML
Sbjct: 327 MDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRLENQDAIDAAIVGML 386
Query: 61 ADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRK 120
ADPKEARA ++E+HFLPF+PT KRTALTYIDS+GKMHRV+KG+PEQILNL HNKS+I R+
Sbjct: 387 ADPKEARAGVREIHFLPFNPTDKRTALTYIDSDGKMHRVSKGAPEQILNLAHNKSEIERR 446
Query: 121 VNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALS 180
V+ VI+KFAERGLRSLAVAYQEVPEG+KES+G PWQF+GL+PLFDPP HDSAETIRRAL+
Sbjct: 447 VHTVIDKFAERGLRSLAVAYQEVPEGTKESAGGPWQFVGLMPLFDPPRHDSAETIRRALN 506
Query: 181 LGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240
LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ++DESI ALP+D+LIEKADGFA
Sbjct: 507 LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDESIGALPIDDLIEKADGFA 566
Query: 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 300
GVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAARSA+DIVLTE
Sbjct: 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 626
Query: 301 PGLNVIITAVLISRAIFQRMRNYMVRGI 328
PGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 627 PGLSVIISAVLTSRAIFQRMKNYTIYAV 654
|
Source: Thellungiella halophila Species: Eutrema halophilum Genus: Eutrema Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224135653|ref|XP_002322127.1| autoinhibited H+ ATPase [Populus trichocarpa] gi|222869123|gb|EEF06254.1| autoinhibited H+ ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 572 bits (1475), Expect = e-161, Method: Compositional matrix adjust.
Identities = 279/329 (84%), Positives = 303/329 (92%), Gaps = 1/329 (0%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEI-FAGGVDADTVVLMAARASQVENLDVIDAAIVGM 59
MDVLC DKTGTLTLNKLTVDKNLIE+ FA GVDADTVVLMAA+AS++EN D ID AIVGM
Sbjct: 337 MDVLCSDKTGTLTLNKLTVDKNLIEVVFAKGVDADTVVLMAAQASRIENQDAIDTAIVGM 396
Query: 60 LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGR 119
LADPKEARA IQEVHFLPF+PT KRTALTYIDS G MHRV+KG+PEQILNL HNKS I R
Sbjct: 397 LADPKEARAGIQEVHFLPFNPTDKRTALTYIDSGGIMHRVSKGAPEQILNLAHNKSDIER 456
Query: 120 KVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 179
+V+AVI+KFAERGLRSLAVAYQ+VPEG KES+G PWQFIGL+PLFDPP HDSAETIRRAL
Sbjct: 457 RVHAVIDKFAERGLRSLAVAYQKVPEGRKESAGGPWQFIGLMPLFDPPRHDSAETIRRAL 516
Query: 180 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 239
+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQD+DESIVALP+DELIEKADGF
Sbjct: 517 NLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIVALPIDELIEKADGF 576
Query: 240 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLT 299
AGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAARSA+DIVLT
Sbjct: 577 AGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLT 636
Query: 300 EPGLNVIITAVLISRAIFQRMRNYMVRGI 328
EPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 637 EPGLSVIISAVLTSRAIFQRMKNYTIYAV 665
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 447 | ||||||
| TAIR|locus:2097895 | 960 | HA4 "H(+)-ATPase 4" [Arabidops | 0.812 | 0.378 | 0.717 | 8.5e-162 | |
| TAIR|locus:2172244 | 956 | HA11 "H(+)-ATPase 11" [Arabido | 0.812 | 0.379 | 0.709 | 3.6e-161 | |
| TAIR|locus:2046623 | 949 | HA5 "H(+)-ATPase 5" [Arabidops | 0.814 | 0.383 | 0.663 | 1.6e-147 | |
| TAIR|locus:2044450 | 949 | HA1 "H(+)-ATPase 1" [Arabidops | 0.814 | 0.383 | 0.646 | 3.4e-141 | |
| TAIR|locus:2096549 | 948 | HA8 "H(+)-ATPase 8" [Arabidops | 0.733 | 0.345 | 0.685 | 1.5e-140 | |
| TAIR|locus:2025727 | 954 | HA9 "H(+)-ATPase 9" [Arabidops | 0.814 | 0.381 | 0.614 | 2.4e-140 | |
| TAIR|locus:2165600 | 949 | HA3 "H(+)-ATPase 3" [Arabidops | 0.814 | 0.383 | 0.636 | 2.1e-139 | |
| TAIR|locus:2053343 | 949 | HA6 "H(+)-ATPase 6" [Arabidops | 0.812 | 0.382 | 0.619 | 6.5e-138 | |
| TAIR|locus:2081932 | 961 | HA7 "H(+)-ATPase 7" [Arabidops | 0.807 | 0.375 | 0.630 | 8.8e-130 | |
| TAIR|locus:2020372 | 947 | AHA10 "autoinhibited H(+)-ATPa | 0.812 | 0.383 | 0.638 | 5.6e-126 |
| TAIR|locus:2097895 HA4 "H(+)-ATPase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1317 (468.7 bits), Expect = 8.5e-162, Sum P(2) = 8.5e-162
Identities = 267/372 (71%), Positives = 301/372 (80%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGML 60
MDVLC DKTGTLTLNKLTVDKNLIE+F GVDADTVVLMAARAS++EN D IDAAIVGML
Sbjct: 331 MDVLCSDKTGTLTLNKLTVDKNLIEVFMKGVDADTVVLMAARASRLENQDAIDAAIVGML 390
Query: 61 ADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRK 120
ADPK+ARA IQEVHFLPF+PT KRTALTYID+EG HRV+KG+PEQILNL HNKS+I R+
Sbjct: 391 ADPKDARAGIQEVHFLPFNPTDKRTALTYIDNEGNTHRVSKGAPEQILNLAHNKSEIERR 450
Query: 121 VNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALS 180
V+AVI+KFAERGLRSLAVAYQ+VPEG K+S+G PWQF+GL+PLFDPP HDSAETIRRAL+
Sbjct: 451 VHAVIDKFAERGLRSLAVAYQDVPEGRKDSAGGPWQFVGLMPLFDPPRHDSAETIRRALN 510
Query: 181 LGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240
LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ++DESIVALPVDELIEKADGFA
Sbjct: 511 LGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFA 570
Query: 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLTE 300
GVFPEHKYEIVK LQAR HICGM G+GVNDAPALKK VLTE
Sbjct: 571 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 630
Query: 301 PGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELNFLFTLD------TVIAI 354
PGL+VII+AVL SRAIFQRM+NY + + ++ + + L ++ D +IAI
Sbjct: 631 PGLSVIISAVLTSRAIFQRMKNYTIYAVS-ITIRIVLGFMLLALIWQFDFPPFMVLIIAI 689
Query: 355 LQ--TAFTSKKD 364
L T T KD
Sbjct: 690 LNDGTIMTISKD 701
|
|
| TAIR|locus:2172244 HA11 "H(+)-ATPase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1310 (466.2 bits), Expect = 3.6e-161, Sum P(2) = 3.6e-161
Identities = 264/372 (70%), Positives = 302/372 (81%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGML 60
MDVLC DKTGTLTLNKLTVDKNLIE+F GVDADTVVLMAA+AS++EN D IDAAIVGML
Sbjct: 327 MDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRLENQDAIDAAIVGML 386
Query: 61 ADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRK 120
ADPKEARA ++EVHFLPF+PT KRTALTYIDS+GKMHRV+KG+PEQILNL HN+++I R+
Sbjct: 387 ADPKEARAGVREVHFLPFNPTDKRTALTYIDSDGKMHRVSKGAPEQILNLAHNRAEIERR 446
Query: 121 VNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALS 180
V+AVI+KFAERGLRSLAVAYQEVPEG+KES+G PWQF+GL+PLFDPP HDSAETIRRAL+
Sbjct: 447 VHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGPWQFMGLMPLFDPPRHDSAETIRRALN 506
Query: 181 LGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240
LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ +DESI ALP+D+LIEKADGFA
Sbjct: 507 LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQHKDESIGALPIDDLIEKADGFA 566
Query: 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLTE 300
GVFPEHKYEIVK LQAR HICGM G+GVNDAPALKK VLTE
Sbjct: 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 626
Query: 301 PGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELNFLFTLD------TVIAI 354
PGL+VII+AVL SRAIFQRM+NY + + ++ + + L ++ D +IAI
Sbjct: 627 PGLSVIISAVLTSRAIFQRMKNYTIYAVS-ITIRIVLGFMLLALIWKFDFPPFMVLIIAI 685
Query: 355 LQ--TAFTSKKD 364
L T T KD
Sbjct: 686 LNDGTIMTISKD 697
|
|
| TAIR|locus:2046623 HA5 "H(+)-ATPase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1207 (429.9 bits), Expect = 1.6e-147, Sum P(2) = 1.6e-147
Identities = 246/371 (66%), Positives = 284/371 (76%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGML 60
MDVLCCDKTGTLTLNKLTVDKNL+E+FA GV + V L+AARAS++EN D IDAAIVGML
Sbjct: 323 MDVLCCDKTGTLTLNKLTVDKNLVEVFAKGVGKEHVFLLAARASRIENQDAIDAAIVGML 382
Query: 61 ADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRK 120
ADPKEARA ++EVHF PF+P KRTALTY+DS+G HR +KG+PEQILNL + K + RK
Sbjct: 383 ADPKEARAGVREVHFFPFNPVDKRTALTYVDSDGNWHRASKGAPEQILNLCNCKEDVRRK 442
Query: 121 VNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALS 180
V+ VI+KFAERGLRSLAVA QEV E K++ G PWQ +GL+PLFDPP HDSAETIRRAL+
Sbjct: 443 VHGVIDKFAERGLRSLAVARQEVLEKKKDAPGGPWQLVGLLPLFDPPRHDSAETIRRALN 502
Query: 181 LGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240
LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ +D S+ ALPVDELIEKADGFA
Sbjct: 503 LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQVKDSSLGALPVDELIEKADGFA 562
Query: 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLTE 300
GVFPEHKYEIV LQ RNHICGM G+GVNDAPALKK VLTE
Sbjct: 563 GVFPEHKYEIVHRLQQRNHICGMTGDGVNDAPALKKADIGIAVVDATDAARGASDIVLTE 622
Query: 301 PGLNVIITAVLISRAIFQRMRNYMVRGIDG----LSSTEFIQVL-ELNFLFTLDTVIAIL 355
PGL+VII+AVL SRAIFQRM+NY + + + FI ++ + +F + +IAIL
Sbjct: 623 PGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWQFDFSPFMVLIIAIL 682
Query: 356 Q--TAFTSKKD 364
T T KD
Sbjct: 683 NDGTIMTISKD 693
|
|
| TAIR|locus:2044450 HA1 "H(+)-ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1175 (418.7 bits), Expect = 3.4e-141, Sum P(2) = 3.4e-141
Identities = 240/371 (64%), Positives = 283/371 (76%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGML 60
MDVLC DKTGTLTLNKL+VDKNL+E+F GV+ D V+L AA AS+VEN D IDAA+VGML
Sbjct: 323 MDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDAIDAAMVGML 382
Query: 61 ADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRK 120
ADPKEARA I+EVHFLPF+P KRTALTYIDS+G HRV+KG+PEQIL+L + + + +K
Sbjct: 383 ADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGNWHRVSKGAPEQILDLANARPDLRKK 442
Query: 121 VNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALS 180
V + I+K+AERGLRSLAVA Q VPE +KES G PW+F+GL+PLFDPP HDSAETIRRAL+
Sbjct: 443 VLSCIDKYAERGLRSLAVARQVVPEKTKESPGGPWEFVGLLPLFDPPRHDSAETIRRALN 502
Query: 181 LGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240
LG+ VKMITGDQLAI KETGRRLGMGTNMYPS+AL G D+D +I ++PV+ELIEKADGFA
Sbjct: 503 LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSAALLGTDKDSNIASIPVEELIEKADGFA 562
Query: 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLTE 300
GVFPEHKYEIVK LQ R HI GM G+GVNDAPALKK VLTE
Sbjct: 563 GVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTE 622
Query: 301 PGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEF----IQVL-ELNFLFTLDTVIAIL 355
PGL+VII+AVL SRAIFQRM+NY + + F I ++ E +F + +IAIL
Sbjct: 623 PGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWEFDFSAFMVLIIAIL 682
Query: 356 Q--TAFTSKKD 364
T T KD
Sbjct: 683 NDGTIMTISKD 693
|
|
| TAIR|locus:2096549 HA8 "H(+)-ATPase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1160 (413.4 bits), Expect = 1.5e-140, Sum P(2) = 1.5e-140
Identities = 225/328 (68%), Positives = 261/328 (79%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGML 60
MDVLC DKTGTLTLNKL+VDK+LIE+F +D+D+VVLMAARAS++EN D IDA+IVGML
Sbjct: 326 MDVLCSDKTGTLTLNKLSVDKSLIEVFPKNMDSDSVVLMAARASRIENQDAIDASIVGML 385
Query: 61 ADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRK 120
DPKEARA I EVHFLPF+P KRTA+TYID G HR +KG+PEQI+ L + + + RK
Sbjct: 386 GDPKEARAGITEVHFLPFNPVDKRTAITYIDESGDWHRSSKGAPEQIIELCNLQGETKRK 445
Query: 121 VNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALS 180
+ VI+ FAERGLRSL VA Q VPE +KES GSPW+F+GL+PLFDPP HDSAETIRRAL
Sbjct: 446 AHEVIDGFAERGLRSLGVAQQTVPEKTKESDGSPWEFVGLLPLFDPPRHDSAETIRRALE 505
Query: 181 LGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240
LG+ VKMITGDQLAI ETGRRLGMGTNMYPS++L G +DES+V +P+DELIEKADGFA
Sbjct: 506 LGVNVKMITGDQLAIGIETGRRLGMGTNMYPSTSLLGNSKDESLVGIPIDELIEKADGFA 565
Query: 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLTE 300
GVFPEHKYEIVK LQ R HICGM G+GVNDAPALKK VLTE
Sbjct: 566 GVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 625
Query: 301 PGLNVIITAVLISRAIFQRMRNYMVRGI 328
PGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 626 PGLSVIISAVLTSRAIFQRMKNYTIYAV 653
|
|
| TAIR|locus:2025727 HA9 "H(+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1135 (404.6 bits), Expect = 2.4e-140, Sum P(2) = 2.4e-140
Identities = 228/371 (61%), Positives = 270/371 (72%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGML 60
MDVLC DKTGTLTLNKLTVDK+++E+F +D D +++ AARAS+VEN D IDA IVGML
Sbjct: 328 MDVLCSDKTGTLTLNKLTVDKSMVEVFVKDLDKDQLLVNAARASRVENQDAIDACIVGML 387
Query: 61 ADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRK 120
DP+EAR I EVHF PF+P KRTA+TYID+ G HRV+KG+PEQI+ L + + ++
Sbjct: 388 GDPREAREGITEVHFFPFNPVDKRTAITYIDANGNWHRVSKGAPEQIIELCNLREDASKR 447
Query: 121 VNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALS 180
+ +I+KFA+RGLRSLAV Q V E K S G PWQF+GL+PLFDPP HDSAETIRRAL
Sbjct: 448 AHDIIDKFADRGLRSLAVGRQTVSEKDKNSPGEPWQFLGLLPLFDPPRHDSAETIRRALD 507
Query: 181 LGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240
LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQD+DESI +LPVDELIEKADGFA
Sbjct: 508 LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIASLPVDELIEKADGFA 567
Query: 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLTE 300
GVFPEHKYEIVK LQ HICGM G+GVNDAPALK+ VLTE
Sbjct: 568 GVFPEHKYEIVKRLQEMKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTE 627
Query: 301 PGLNVIITAVLISRAIFQRMRNYMVRGID-GLSSTEFIQVLELNFLFTLDT----VIAIL 355
PGL+VI++AVL SRAIFQRM+NY + + + +L L + F ++AIL
Sbjct: 628 PGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVMGFMLLALIWKFDFSPFMVLIVAIL 687
Query: 356 Q--TAFTSKKD 364
T T KD
Sbjct: 688 NDGTIMTISKD 698
|
|
| TAIR|locus:2165600 HA3 "H(+)-ATPase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1176 (419.0 bits), Expect = 2.1e-139, Sum P(2) = 2.1e-139
Identities = 236/371 (63%), Positives = 286/371 (77%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGML 60
MDVLC DKTGTLTLNKL+VDKNLIE++ GV+ D V+L AARAS+VEN D IDAA+VGML
Sbjct: 324 MDVLCSDKTGTLTLNKLSVDKNLIEVYCKGVEKDEVLLFAARASRVENQDAIDAAMVGML 383
Query: 61 ADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRK 120
ADPKEARA I+E+HFLPF+P KRTALT+IDS G HRV+KG+PEQIL+L + ++ + ++
Sbjct: 384 ADPKEARAGIREIHFLPFNPVDKRTALTFIDSNGNWHRVSKGAPEQILDLCNARADLRKR 443
Query: 121 VNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALS 180
V++ I+K+AERGLRSLAV+ Q VPE +KESSGSPW+F+G++PLFDPP HDSAETIRRAL
Sbjct: 444 VHSTIDKYAERGLRSLAVSRQTVPEKTKESSGSPWEFVGVLPLFDPPRHDSAETIRRALD 503
Query: 181 LGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240
LG+ VKMITGDQLAIAKETGRRLGMG+NMYPSS+L G+ +DE++ +PV++LIEKADGFA
Sbjct: 504 LGVNVKMITGDQLAIAKETGRRLGMGSNMYPSSSLLGKHKDEAMAHIPVEDLIEKADGFA 563
Query: 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLTE 300
GVFPEHKYEIVK LQ R HICGM G+GVNDAPALKK VLTE
Sbjct: 564 GVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTE 623
Query: 301 PGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEF-IQVLELNFLFTLDT----VIAIL 355
PGL+VII+AVL SRAIFQRM+NY + + F ++ L + F +IAIL
Sbjct: 624 PGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWKFDFSPFMVLIIAIL 683
Query: 356 Q--TAFTSKKD 364
T T KD
Sbjct: 684 NDGTIMTISKD 694
|
|
| TAIR|locus:2053343 HA6 "H(+)-ATPase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1128 (402.1 bits), Expect = 6.5e-138, Sum P(2) = 6.5e-138
Identities = 230/371 (61%), Positives = 274/371 (73%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGML 60
MDVLC DKTGTLTLNKLTVDKNLIE+F+ VD D V+L++ARAS+VEN D ID +IV ML
Sbjct: 326 MDVLCSDKTGTLTLNKLTVDKNLIEVFSKDVDKDYVILLSARASRVENQDAIDTSIVNML 385
Query: 61 ADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRK 120
DPKEARA I EVHFLPF+P KRTA+TYID+ G+ HR +KG+PEQI+ L K + R+
Sbjct: 386 GDPKEARAGITEVHFLPFNPVEKRTAITYIDTNGEWHRCSKGAPEQIIELCDLKGETKRR 445
Query: 121 VNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALS 180
+ +I+KFAERGLRSL VA Q VPE KES+G+PW+F+GL+PLFDPP HDSAETIRRAL
Sbjct: 446 AHEIIDKFAERGLRSLGVARQRVPEKDKESAGTPWEFVGLLPLFDPPRHDSAETIRRALD 505
Query: 181 LGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240
LG+ VKMITGDQLAI KETGRRLGMGTNMYPSS+L +++D++ +PVDELIEKADGFA
Sbjct: 506 LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL-ENKDDTTGGVPVDELIEKADGFA 564
Query: 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLTE 300
GVFPEHKYEIV+ LQ R HI GM G+GVNDAPALKK VLTE
Sbjct: 565 GVFPEHKYEIVRKLQERKHIVGMTGDGVNDAPALKKADIGIAVDDATDAARSASDIVLTE 624
Query: 301 PGLNVIITAVLISRAIFQRMRNYMVRGID-----GLSSTEFIQVLELNFLFTLDTVIAIL 355
PGL+VI++AVL SRAIFQRM+NY + + L + E +F + +IAIL
Sbjct: 625 PGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLVALIWEFDFSPFMVLIIAIL 684
Query: 356 Q--TAFTSKKD 364
T T KD
Sbjct: 685 NDGTIMTISKD 695
|
|
| TAIR|locus:2081932 HA7 "H(+)-ATPase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1149 (409.5 bits), Expect = 8.8e-130, Sum P(2) = 8.8e-130
Identities = 234/371 (63%), Positives = 274/371 (73%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGML 60
MDVLC DKTGTLTLNKL+VDKNLIE+F G+D D VLMAARA+++EN D ID AIV ML
Sbjct: 326 MDVLCSDKTGTLTLNKLSVDKNLIEVFKRGIDRDMAVLMAARAARLENQDAIDTAIVSML 385
Query: 61 ADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRK 120
+DPKEARA I+E+HFLPF P +RTALTY+D EGKMHRV+KG+PE+IL++ HNK +I K
Sbjct: 386 SDPKEARAGIKELHFLPFSPANRRTALTYLDGEGKMHRVSKGAPEEILDMAHNKLEIKEK 445
Query: 121 VNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALS 180
V+A I+KFAERGLRSL +AYQEVP+G + G PW F+ L+PLFDPP HDSA+TI RAL
Sbjct: 446 VHATIDKFAERGLRSLGLAYQEVPDGDVKGEGGPWDFVALLPLFDPPRHDSAQTIERALH 505
Query: 181 LGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240
LG+ VKMITGDQLAIAKETGRRLGMGTNMYPSS+L + E + VDELIE ADGFA
Sbjct: 506 LGVSVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLSDNNTEGV---SVDELIENADGFA 562
Query: 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLTE 300
GVFPEHKYEIVK LQ+R HICGM G+GVNDAPALKK VLTE
Sbjct: 563 GVFPEHKYEIVKRLQSRKHICGMTGDGVNDAPALKKADIGIAVDDATDAARGASDIVLTE 622
Query: 301 PGLNVIITAVLISRAIFQRMRNYMVRGID-GLSSTEFIQVL----ELNFLFTLDTVIAIL 355
PGL+VII+AVL SRAIFQRM+NY + + + +L E +F + VIAIL
Sbjct: 623 PGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVMGFMLLCVFWEFDFPPFMVLVIAIL 682
Query: 356 Q--TAFTSKKD 364
T T KD
Sbjct: 683 NDGTIMTISKD 693
|
|
| TAIR|locus:2020372 AHA10 "autoinhibited H(+)-ATPase isoform 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1166 (415.5 bits), Expect = 5.6e-126, Sum P(2) = 5.6e-126
Identities = 237/371 (63%), Positives = 279/371 (75%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGML 60
MDVLCCDKTGTLTLN LTVDKNLIE+F +D DT++L+A RAS++EN D IDAAIV ML
Sbjct: 331 MDVLCCDKTGTLTLNSLTVDKNLIEVFVDYMDKDTILLLAGRASRLENQDAIDAAIVSML 390
Query: 61 ADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRK 120
ADP+EARA+I+E+HFLPF+P KRTA+TYIDS+GK +R TKG+PEQ+LNL K++I ++
Sbjct: 391 ADPREARANIREIHFLPFNPVDKRTAITYIDSDGKWYRATKGAPEQVLNLCQQKNEIAQR 450
Query: 121 VNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALS 180
V A+I++FAE+GLRSLAVAYQE+PE S S G PW+F GL+PLFDPP HDS ETI RALS
Sbjct: 451 VYAIIDRFAEKGLRSLAVAYQEIPEKSNNSPGGPWRFCGLLPLFDPPRHDSGETILRALS 510
Query: 181 LGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240
LG+ VKMITGDQLAIAKETGRRLGMGTNMYPSS+L G + DE A+PVDELIE ADGFA
Sbjct: 511 LGVCVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGHNNDEH-EAIPVDELIEMADGFA 569
Query: 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLTE 300
GVFPEHKYEIVK LQ H+ GM G+GVNDAPALKK VLT+
Sbjct: 570 GVFPEHKYEIVKILQEMKHVVGMTGDGVNDAPALKKADIGIAVADATDAARSSADIVLTD 629
Query: 301 PGLNVIITAVLISRAIFQRMRNYMVRGID-----GLSSTEFIQVLELNFLFTLDTVIAIL 355
PGL+VII+AVL SRAIFQRMRNY V + L T + E +F + +IAIL
Sbjct: 630 PGLSVIISAVLTSRAIFQRMRNYTVYAVSITIRIVLGFTLLALIWEYDFPPFMVLIIAIL 689
Query: 356 Q--TAFTSKKD 364
T T KD
Sbjct: 690 NDGTIMTISKD 700
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9SU58 | PMA4_ARATH | 3, ., 6, ., 3, ., 6 | 0.8414 | 0.7337 | 0.3416 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 447 | |||
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 1e-162 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-78 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 8e-62 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 3e-40 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 4e-40 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 2e-38 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 8e-35 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 9e-34 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 6e-33 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 3e-32 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 1e-29 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 3e-27 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 5e-26 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 3e-23 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 3e-21 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 3e-21 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 1e-20 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 5e-20 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 5e-19 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 8e-16 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 3e-13 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 1e-10 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 5e-09 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 7e-07 | |
| PRK01158 | 230 | PRK01158, PRK01158, phosphoglycolate phosphatase; | 2e-04 | |
| TIGR00338 | 219 | TIGR00338, serB, phosphoserine phosphatase SerB | 0.001 | |
| TIGR00099 | 256 | TIGR00099, Cof-subfamily, Cof subfamily of IIB sub | 0.002 | |
| pfam08282 | 254 | pfam08282, Hydrolase_3, haloacid dehalogenase-like | 0.003 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 476 bits (1226), Expect = e-162
Identities = 195/361 (54%), Positives = 243/361 (67%), Gaps = 17/361 (4%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGML 60
MD+LC DKTGTLTLNKL++D+ L F G D D V+L AA AS+ E+ D ID A++G
Sbjct: 286 MDILCSDKTGTLTLNKLSIDEILP--FFNGFDKDDVLLYAALASREEDQDAIDTAVLGSA 343
Query: 61 ADPKEARADIQEVHFLPFDPTGKRTALTYIDSE-GKMHRVTKGSPEQILNLLHNKSKIGR 119
D KEAR + + F+PFDP KRT T D E GK +VTKG+P+ IL+L NK +I
Sbjct: 344 KDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEE 403
Query: 120 KVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 179
KV +++ A RG R+L VA W F+GL+PLFDPP HD+ ETI RA
Sbjct: 404 KVEEKVDELASRGYRALGVART--------DEEGRWHFLGLLPLFDPPRHDTKETIERAR 455
Query: 180 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 239
LG+ VKM+TGD LAIAKET RRLG+GTN+Y + L D + + + E++E ADGF
Sbjct: 456 HLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDL-PSGLGEMVEDADGF 514
Query: 240 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLT 299
A VFPEHKYEIV+ LQ R H+ GM G+GVNDAPALKKAD+GIAVA ATDAARSAADIVLT
Sbjct: 515 AEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDAARSAADIVLT 574
Query: 300 EPGLNVIITAVLISRAIFQRMRNYMVRGIDG---LSSTEFIQVLELNFLFTLDTV--IAI 354
EPGL+VI+ A+L SR IFQRM++Y++ I + + +L LNF F V IAI
Sbjct: 575 EPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNFYFPPIMVVIIAI 634
Query: 355 L 355
L
Sbjct: 635 L 635
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 261 bits (669), Expect = 1e-78
Identities = 126/382 (32%), Positives = 175/382 (45%), Gaps = 54/382 (14%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADT-----------VVLMAARASQVE-- 47
+DV+C DKTGTLT NK+TV K I I GG D D +L AA + V
Sbjct: 348 VDVICSDKTGTLTQNKMTVKK--IYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPE 405
Query: 48 ------NLDVIDAAIV------GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGK 95
D + A+V G D + + +PFD KR ++ EGK
Sbjct: 406 KNGWYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGK 465
Query: 96 MHRVTKGSPEQILN-------LLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK 148
KG+PE IL L + R + + + A GLR LAVAY+++ K
Sbjct: 466 YILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEK 525
Query: 149 ESS----GSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLG 204
+ S F+GL + DPP D E I G+ V MITGD + A + G
Sbjct: 526 DDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECG 585
Query: 205 MGTNMYPSSALSGQD-----RDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNH 259
+ + + G + +E + EL+E+ FA V PE K IV+ LQ H
Sbjct: 586 IEAEAESALVIDGAELDALSDEE------LAELVEELSVFARVSPEQKARIVEALQKSGH 639
Query: 260 ICGMIGNGVNDAPALKKADIGIAVAD-ATDAARSAADIVLTEPGLNVIITAVLISRAIFQ 318
+ M G+GVNDAPALK AD+GIA+ TDAA+ AADIVL + I+ AV+ R ++
Sbjct: 640 VVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYV 699
Query: 319 RMRNYMVRGIDGLSSTEFIQVL 340
++ + I L S +VL
Sbjct: 700 NIKKF----ILYLLSKNVGEVL 717
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 209 bits (533), Expect = 8e-62
Identities = 103/323 (31%), Positives = 150/323 (46%), Gaps = 58/323 (17%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIV--- 57
+D LC DKTGTLT NK+T+ + I G D + ++ D ++ A++
Sbjct: 240 VDYLCSDKTGTLTKNKMTLQG--VYIDGGKEDNSSSLVACDNNYLSG--DPMEKALLKSA 295
Query: 58 GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKI 117
++ + + + + PF KR ++ +G KG+PE IL +N
Sbjct: 296 ELVGKADKGNKEYKILDVFPFSSVLKRMSVIVETPDGSDLLFVKGAPEFILERCNN---- 351
Query: 118 GRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRR 177
+ A +GLR LA A +E+ + +F+GLI DP D+ ETI
Sbjct: 352 ---YEEKYLELARQGLRVLAFASKELEDD--------LEFLGLITFEDPLRPDAKETIEE 400
Query: 178 ALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 237
+ G+ V MITGD + AK + LG+ D
Sbjct: 401 LKAAGIKVVMITGDNVLTAKAIAKELGI-------------------------------D 429
Query: 238 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 297
FA V PE K +IV+ LQ + HI M G+GVNDAPALKKAD+GIA+ A++AADIV
Sbjct: 430 VFARVSPEQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAM-----GAKAAADIV 484
Query: 298 LTEPGLNVIITAVLISRAIFQRM 320
L + L+ I+ AV R IF +
Sbjct: 485 LLDDDLSAIVKAVKEGRKIFSNI 507
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 153 bits (388), Expect = 3e-40
Identities = 107/346 (30%), Positives = 169/346 (48%), Gaps = 35/346 (10%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQ----VENLDVIDAAI 56
MD+LC DKTGTLT +K+ ++ + +I G ++ V+ A S ++NL +D A+
Sbjct: 371 MDILCTDKTGTLTQDKIVLENH-TDIS--GKTSERVLHSAWLNSHYQTGLKNL--LDTAV 425
Query: 57 VGMLADPKEAR--ADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNK 114
+ + + + Q++ +PFD +R ++ ++ + KG+ E+ILN+
Sbjct: 426 LEGVDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQV 485
Query: 115 SKIG----------RKVNAVINKFAERGLRSLAVAYQEVPEGSKESS---GSPWQFIGLI 161
G R++ V + +GLR +AVA + +P + S G I
Sbjct: 486 RHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYI 545
Query: 162 PLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRD 221
DPP +A ++ + G+ VK++TGD +A + +G+ L G D
Sbjct: 546 AFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAG----EVLIGSD-- 599
Query: 222 ESIVALPVDEL---IEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKAD 278
I L DEL E+ FA + P HK IV L+ H+ G +G+G+NDAPAL+ AD
Sbjct: 600 --IETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAAD 657
Query: 279 IGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYM 324
IGI+V A D AR AADI+L E L V+ V+ R F M Y+
Sbjct: 658 IGISVDGAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYI 703
|
Length = 902 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 153 bits (387), Expect = 4e-40
Identities = 110/376 (29%), Positives = 164/376 (43%), Gaps = 69/376 (18%)
Query: 2 DVLCCDKTGTLTLNKLTVDK--------NLIEIFA----GGVDADTVVLMAARASQVENL 49
+V+C DKTGTLT N +TV K ++ + G V D VL V +
Sbjct: 325 NVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRI 384
Query: 50 ---------------------DVIDAAIVGMLA-----DPKEARADIQEVHFLPFDPTGK 83
+ D A++ +L D +E + EV PF K
Sbjct: 385 LEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEV---PFSSERK 441
Query: 84 --RTALTYIDSEGKMHRVTKGSPEQILNLLHNKSK-----------IGRKVNAVINKFAE 130
+ +M + KG+ EQ+L K + + A
Sbjct: 442 WMAVKCVHRQDRSEMCFM-KGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMAS 500
Query: 131 RGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITG 190
GLR +A A PE + + F+GL+ + DPP E + ++ G+ + MITG
Sbjct: 501 AGLRVIAFASG--PEKGQLT------FLGLVGINDPPRPGVKEAVTTLITGGVRIIMITG 552
Query: 191 DQLAIAKETGRRLGMGTNMYPSSALSGQDRDE-SIVALPVDELIEKADGFAGVFPEHKYE 249
D A RRLGM S ++SG+ D L +++ K FA PEHK +
Sbjct: 553 DSQETAVSIARRLGMP--SKTSQSVSGEKLDAMDDQQL--SQIVPKVAVFARASPEHKMK 608
Query: 250 IVKHLQARNHICGMIGNGVNDAPALKKADIGIAVAD-ATDAARSAADIVLTEPGLNVIIT 308
IVK LQ R + M G+GVNDAPALK ADIG+A+ TD A+ AAD++LT+ I++
Sbjct: 609 IVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILS 668
Query: 309 AVLISRAIFQRMRNYM 324
A+ + IF ++N++
Sbjct: 669 AIEEGKGIFNNIKNFI 684
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 148 bits (374), Expect = 2e-38
Identities = 98/344 (28%), Positives = 167/344 (48%), Gaps = 31/344 (9%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMA--ARASQVENLDVIDAAIVG 58
MD+LC DKTGTLT +K+ ++K+ I + G ++ V+ MA Q +V+D A++
Sbjct: 336 MDILCTDKTGTLTQDKIELEKH---IDSSGETSERVLKMAWLNSYFQTGWKNVLDHAVLA 392
Query: 59 MLAD--PKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSK 116
L + ++ + ++V +PFD +R ++ + + KG+ E++L + +K
Sbjct: 393 KLDESAARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRF 452
Query: 117 IG----------RKVNAVINKFAERGLRSLAVAYQEVPEGSKESS---GSPWQFIGLIPL 163
G ++ + + +G+R +AVA + + G + + G +
Sbjct: 453 GGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGF 512
Query: 164 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDES 223
DPP + E I G+ VK++TGD + + +G+ N L G D
Sbjct: 513 LDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAN----DFLLGAD---- 564
Query: 224 IVALPVDEL---IEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 280
I L +EL + K FA + P K I+ L+ H G +G+G+NDAPAL+KAD+G
Sbjct: 565 IEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVG 624
Query: 281 IAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYM 324
I+V A D A+ A+DI+L E L V+ V+ R F + Y+
Sbjct: 625 ISVDTAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYL 668
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 137 bits (347), Expect = 8e-35
Identities = 85/261 (32%), Positives = 127/261 (48%), Gaps = 46/261 (17%)
Query: 101 KGSPEQIL---NLLHNK--------SKIGRKVNAVINKFAER-GLRSLAVAYQEVPEGSK 148
KG+PE +L + N K+ + +VI + LR LA+A++++P+ +
Sbjct: 450 KGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPRE 509
Query: 149 ESSG----------SPWQFIGLIPLFDPP---IHDSAETIRRALSLGLGVKMITGDQLAI 195
E S FIG++ + DPP + D+ E R A G+ V MITGD
Sbjct: 510 EDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTA---GIRVIMITGDNKET 566
Query: 196 AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADG--------FAGVFPEHK 247
A+ RR+G+ P ++ + S DE+ F+ V P HK
Sbjct: 567 AEAICRRIGI---FSPDEDVTFK----SFTGREFDEMGPAKQRAACRSAVLFSRVEPSHK 619
Query: 248 YEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVII 307
E+V+ LQ + I M G+GVNDAPALKKADIGIA+ T+ A+ A+D+VL + I+
Sbjct: 620 SELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIV 679
Query: 308 TAVLISRAIFQRMRN---YMV 325
AV RAI+ M+ YM+
Sbjct: 680 AAVEEGRAIYNNMKQFIRYMI 700
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 133 bits (338), Expect = 9e-34
Identities = 87/315 (27%), Positives = 130/315 (41%), Gaps = 63/315 (20%)
Query: 7 DKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEA 66
DKTGTLT K V ++ A D D ++ +AA Q + AIV A+
Sbjct: 411 DKTGTLTEGKPEV----TDVVALDGDEDELLALAAALEQHSE-HPLAKAIVKAAAERGLP 465
Query: 67 RADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVIN 126
+ E G+ +++E RV G+ LL + ++ I
Sbjct: 466 DVEDFEEI------PGRG-----VEAEVDGERVLVGNAR----LLGEEGIDLPLLSERIE 510
Query: 127 KFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVK 186
G + VA + +G+I L D D+ E I +LG+ V
Sbjct: 511 ALESEGKTVVFVAVDG-------------KLVGVIALADELRPDAKEAIAALKALGIKVV 557
Query: 187 MITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 246
M+TGD A+ + LG +DE+ A + PE
Sbjct: 558 MLTGDNRRTAEAIAKELG------------------------IDEV------RAELLPED 587
Query: 247 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVI 306
K EIV+ LQA M+G+G+NDAPAL AD+GIA+ TD A AAD+VL L+ +
Sbjct: 588 KAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAV 647
Query: 307 ITAVLISRAIFQRMR 321
A+ +SRA + ++
Sbjct: 648 PEAIDLSRATRRIIK 662
|
Length = 713 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 131 bits (332), Expect = 6e-33
Identities = 101/341 (29%), Positives = 163/341 (47%), Gaps = 37/341 (10%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMA----ARASQVENLDVIDAAI 56
MDVLC DKTGTLT +++ ++ +L G + V+ +A S ++NL +D A+
Sbjct: 369 MDVLCTDKTGTLTQDRIILEHHLD---VSGRKDERVLQLAWLNSFHQSGMKNL--MDQAV 423
Query: 57 V--GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNK 114
V A ++V LPFD +R ++ D++G+ + KG+ E++L + +
Sbjct: 424 VAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHV 483
Query: 115 SKIG----------RKVNAVINKFAERGLRSLAVAYQEVPEGSKE---SSGSPWQFI--G 159
++ A+ + G R L VA +E+P G S+ + G
Sbjct: 484 RDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRG 543
Query: 160 LIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQD 219
+ DPP +A I G+ VK++TGD + + R +G+ P L G +
Sbjct: 544 FLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLE----PGEPLLGTE 599
Query: 220 RDESIVALPVDEL---IEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKK 276
I A+ L +E+ FA + P K ++K LQA H G +G+G+NDAPAL+
Sbjct: 600 ----IEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRD 655
Query: 277 ADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIF 317
AD+GI+V D A+ +ADI+L E L V+ V+ R F
Sbjct: 656 ADVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETF 696
|
Length = 903 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 128 bits (324), Expect = 3e-32
Identities = 81/327 (24%), Positives = 131/327 (40%), Gaps = 68/327 (20%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGML 60
+ + DKTGTLT K TV IE ++ +L A A + + + AIV
Sbjct: 246 VKTVVFDKTGTLTTGKPTVVD--IEPLDDASISEEELLALAAALEQSSSHPLARAIV--- 300
Query: 61 ADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQIL----NLLHNKSK 116
A + + + + + +G T E++ L +
Sbjct: 301 -----RYAKKRGLELPK------QEDVEEVPGKGV--EATVDGGEEVRIGNPRFLELAIE 347
Query: 117 IGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIR 176
++N+ +G + VA + +G+I L D ++ E I
Sbjct: 348 PISASPDLLNEGESQGKTVVFVAVDG-------------ELLGVIALRDQLRPEAKEAIA 394
Query: 177 RAL--SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIE 234
AL + G+ + M+TGD + A+ LG +DE+
Sbjct: 395 -ALKRAGGIKLVMLTGDNRSAAEAVAAELG------------------------IDEV-- 427
Query: 235 KADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAA 294
A + PE K IVK LQ + M+G+G+NDAPAL AD+GIA+ +D A AA
Sbjct: 428 ----HAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAA 483
Query: 295 DIVLTEPGLNVIITAVLISRAIFQRMR 321
DIVL L+ + TA+ +SR + ++
Sbjct: 484 DIVLLNDDLSSLPTAIDLSRKTRRIIK 510
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 121 bits (305), Expect = 1e-29
Identities = 83/320 (25%), Positives = 128/320 (40%), Gaps = 65/320 (20%)
Query: 2 DVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLA 61
D + DKTGTLT K TV + +F + + L AA + E+ + AIV
Sbjct: 285 DTVVFDKTGTLTQGKPTV--TDVHVFGESDRDELLALAAALEAGSEH--PLAKAIVSYAK 340
Query: 62 DPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKV 121
+ + + +P G T EG ++ G+ + L N K +V
Sbjct: 341 AKGITLSQVSDFKAIP----GIGVEGTV---EGHTIQL--GNEKL---LGENGLKTDGEV 388
Query: 122 NAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSL 181
L E+ G++ L D ++ E I+
Sbjct: 389 EEGGGT-----TSVLVAVNGEL--------------AGVLALADQLKPEAKEVIQALKRR 429
Query: 182 GLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 241
G+ M+TGD AK + LG IE + A
Sbjct: 430 GIEPVMLTGDNRKTAKAVAKELG----------------------------IE--NVRAE 459
Query: 242 VFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEP 301
V P+ K ++K LQ + + M+G+G+NDAPAL +AD+GIA+ TD A AAD+VL
Sbjct: 460 VLPDDKAALIKKLQEKGKVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLLRN 519
Query: 302 GLNVIITAVLISRAIFQRMR 321
LN + TA+ +SR +R++
Sbjct: 520 DLNDVATAIDLSRKTLRRIK 539
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 114 bits (288), Expect = 3e-27
Identities = 95/371 (25%), Positives = 157/371 (42%), Gaps = 63/371 (16%)
Query: 4 LCCDKTGTLTLNKLTVDKNLI-EIFAGGVDADTVVLMAARASQVENLDV----------- 51
+C DKTGTLT N ++V + I E D V R VE + +
Sbjct: 381 ICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRG 440
Query: 52 ---------IDAAIVGM----LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHR 98
+ A++ L D +E RA+ + V PF+ K ++ S GK
Sbjct: 441 GKRAFIGSKTECALLDFGLLLLRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKYRE 500
Query: 99 VTKGSPEQILNLLHNK------SKIGRK-----VNAVINKFAERGLRSLAVAY-----QE 142
KG+ E +L + + VI A LR++ +AY +E
Sbjct: 501 FRKGASEIVLKPCRKRLDSNGEATPISDDDKDRCADVIEPLASDALRTICLAYRDFAPEE 560
Query: 143 VPEGSKESSGSPWQFIGLIPLFDP---PIHDSAETIRRALSLGLGVKMITGDQLAIAKET 199
P + G IG++ + DP + ++ + +RA G+ V+M+TGD + AK
Sbjct: 561 FPRKDYPNKG--LTLIGVVGIKDPLRPGVREAVQECQRA---GITVRMVTGDNIDTAKAI 615
Query: 200 GRRLGMGTNMYPSSALSGQD-----RDESIVALPVDELIEKADGFAGVFPEHKYEIVKHL 254
R G+ T + A+ G++ +E LP K A P K +V L
Sbjct: 616 ARNCGILT--FGGLAMEGKEFRSLVYEEMDPILP------KLRVLARSSPLDKQLLVLML 667
Query: 255 QARNHICGMIGNGVNDAPALKKADIGIAVADA-TDAARSAADIVLTEPGLNVIITAVLIS 313
+ + + G+G NDAPALK AD+G ++ + T+ A+ A+DI+L + I+ AV
Sbjct: 668 KDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWG 727
Query: 314 RAIFQRMRNYM 324
R ++ +R ++
Sbjct: 728 RNVYDNIRKFL 738
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 111 bits (278), Expect = 5e-26
Identities = 81/303 (26%), Positives = 142/303 (46%), Gaps = 43/303 (14%)
Query: 62 DPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRV-TKGSPEQILNLLHN-KSKIGR 119
+ K A + + PFD KR A Y D+ G+ + + KG+ E+I+ + K G
Sbjct: 517 NEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGV 576
Query: 120 KVN-----------AVINKFAERGLRSLAVAYQEVPEG------------SKESSGSPWQ 156
K++ A + A GLR LA A + + ++ ++ S +
Sbjct: 577 KISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLE 636
Query: 157 FIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLG-MGTNMYPSS-- 213
F+GLI ++DPP ++SA + + G+ V M+TGD AK + +G + N
Sbjct: 637 FLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDE 696
Query: 214 -----ALSGQD----RDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMI 264
++G DE + L L+ A P+ K ++++ L R C M
Sbjct: 697 IMDSMVMTGSQFDALSDEEVDDLKALCLV-----IARCAPQTKVKMIEALHRRKAFCAMT 751
Query: 265 GNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNY 323
G+GVND+P+LK A++GIA+ + +D A+ A+DIVL++ I+ A+ R +F + +
Sbjct: 752 GDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKF 811
Query: 324 MVR 326
++
Sbjct: 812 VLH 814
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 3e-23
Identities = 108/417 (25%), Positives = 168/417 (40%), Gaps = 113/417 (27%)
Query: 3 VLCCDKTGTLTLNKLTV-----DKNLIEIFAGGVDADT---------------------V 36
+C DKTGTLT N++TV D + E ADT +
Sbjct: 346 TICSDKTGTLTQNRMTVAHMWFDNQIHE-------ADTTEDQSGVSFDKSSATWLALSRI 398
Query: 37 VLMAARA---SQVENLDVIDAAIVG-------------MLADPKEARADIQEVHFLPFDP 80
+ RA + EN+ ++ A+ G L E R +V +PF+
Sbjct: 399 AGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNS 458
Query: 81 TGKR--TALTYIDSEGKMH-RVTKGSPEQILN-----LLHNKSK-IGRKVNAVINK---- 127
T K + D H V KG+PE+IL L+H K + + ++
Sbjct: 459 TNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLE 518
Query: 128 ---FAER--GLRSLAVAYQEVPEGSK---ESSGSPWQ---FIGLIPLFDPPIHDSAETIR 176
ER G L + ++ PEG + + P F+GLI + DPP + +
Sbjct: 519 LGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVG 578
Query: 177 RALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVA---LPVDELI 233
+ S G+ V M+TGD AK + +G+ + G + E I A +PV ++
Sbjct: 579 KCRSAGIKVIMVTGDHPITAKAIAKGVGIIS--------EGNETVEDIAARLNIPVSQVN 630
Query: 234 EKADG----------------------------FAGVFPEHKYEIVKHLQARNHICGMIG 265
+ FA P+ K IV+ Q + I + G
Sbjct: 631 PRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTG 690
Query: 266 NGVNDAPALKKADIGIAVADA-TDAARSAADIVLTEPGLNVIITAVLISRAIFQRMR 321
+GVND+PALKKADIG+A+ A +D ++ AAD++L + I+T V R IF ++
Sbjct: 691 DGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLK 747
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 96.2 bits (240), Expect = 3e-21
Identities = 83/316 (26%), Positives = 129/316 (40%), Gaps = 87/316 (27%)
Query: 2 DVLCCDKTGTLTL-NKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDA-----A 55
D L DKTGT+TL N+ + I GV + + A AS + D +
Sbjct: 300 DTLLLDKTGTITLGNRQASEF----IPVPGVSEEELADAAQLAS------LADETPEGRS 349
Query: 56 IVGMLADPKEARADIQEVH----FLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLL 111
IV LA ++ F+PF +T ++ +D G + KG+ + I +
Sbjct: 350 IV-ELAKKLGIELREDDLQSHAEFVPFT---AQTRMSGVDLPGG-REIRKGAVDAIRRYV 404
Query: 112 H-NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFD---PP 167
I ++A +++ + G L V E + +G+I L D P
Sbjct: 405 RERGGHIPEDLDAAVDEVSRLGGTPLVVV-----ENGR--------ILGVIYLKDIVKPG 451
Query: 168 IHDSAETIRRALSLGLGVK--MITGDQ----LAIAKETGRRLGMGTNMYPSSALSGQDRD 221
I + +R+ +G+K MITGD AIA E G
Sbjct: 452 IKERFAELRK-----MGIKTVMITGDNPLTAAAIAAEAG--------------------- 485
Query: 222 ESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 281
VD+ I +A PE K +++ QA + M G+G NDAPAL +AD+G+
Sbjct: 486 -------VDDFIAEAT------PEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGV 532
Query: 282 AVADATDAARSAADIV 297
A+ T AA+ AA++V
Sbjct: 533 AMNSGTQAAKEAANMV 548
|
Length = 681 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 95.9 bits (239), Expect = 3e-21
Identities = 58/175 (33%), Positives = 87/175 (49%), Gaps = 36/175 (20%)
Query: 156 QFIGLIPLFDPPIHDSAETIRRALSLGLG-VKMITGDQLAIAKETGRRLGMGTNMYPSSA 214
++G I L D P D+AE I +LG+ V M+TGD+ A+A+ R LG
Sbjct: 352 TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELG---------- 401
Query: 215 LSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPAL 274
+DE+ A + PE K EIVK L+ + M+G+G+NDAPAL
Sbjct: 402 --------------IDEV------HAELLPEDKLEIVKELREKYGPVAMVGDGINDAPAL 441
Query: 275 KKADIGIAV-ADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI 328
AD+GIA+ A +D A AD+VL L+ + A+ ++R R R + + +
Sbjct: 442 AAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLAR----RTRRIVKQNV 492
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 94.7 bits (236), Expect = 1e-20
Identities = 88/391 (22%), Positives = 145/391 (37%), Gaps = 103/391 (26%)
Query: 2 DVLCCDKTGTLTLNKLTV--------DKNLIEIF---AGGVDADTVVLMAARAS--QVEN 48
DV C DKTGTLT + L + ++ ++I + + T +A S ++E
Sbjct: 449 DVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEG 508
Query: 49 ------LDVIDAAIVG------------------MLADPKEARADIQEVHFLPFDPTGKR 84
LD G + D I + F +R
Sbjct: 509 KLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSI--IRRFQFSSALQR 566
Query: 85 TA-LTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEV 143
+ + + E KG+PE I +L + V+ + G R LA+AY+E+
Sbjct: 567 MSVIVSTNDERSPDAFVKGAPETIQSLCS-PETVPSDYQEVLKSYTREGYRVLALAYKEL 625
Query: 144 P--------EGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQL-- 193
P + S+++ S F+G I +P D+ E I+ + MITGD
Sbjct: 626 PKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLT 685
Query: 194 --AIAKETG-----RRLGMGTNMYPSSALS------------------------GQDRDE 222
+A+E G L + P S GQD E
Sbjct: 686 AVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVE 745
Query: 223 SIVALP--------------------VDELIEKADGFAGVFPEHKYEIVKHLQARNHICG 262
++A + L+ FA + P+ K +V+ LQ ++ G
Sbjct: 746 DLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVG 805
Query: 263 MIGNGVNDAPALKKADIGIAVADATDAARSA 293
M G+G ND ALK+AD+GI++++A +A+ +A
Sbjct: 806 MCGDGANDCGALKQADVGISLSEA-EASVAA 835
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 92.6 bits (231), Expect = 5e-20
Identities = 83/326 (25%), Positives = 132/326 (40%), Gaps = 108/326 (33%)
Query: 2 DVLCCDKTGTLTL-NKLTVDKNLIEIF--AGGVDADTVVLMAARASQVENLDVIDAAIVG 58
D L DKTGT+TL N+ + F GV + ++ DAA +
Sbjct: 299 DTLLLDKTGTITLGNRQASE------FLPVPGVTEE---------------ELADAAQLS 337
Query: 59 MLADP-----------------KEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTK 101
LAD +E F+PF +T ++ +D +G + K
Sbjct: 338 SLADETPEGRSIVVLAKQRFNLRERDLQSLHATFVPFS---AQTRMSGVDLDG--REIRK 392
Query: 102 GSPEQILNLLH-NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGL 160
G+ + I + N +++A +++ A +G L VA E ++ +G+
Sbjct: 393 GAVDAIRRYVESNGGHFPAELDAAVDEVARKGGTPLVVA-----EDNR--------VLGV 439
Query: 161 IPLFD---PPIHDSAETIRRALSLGLGVK--MITGD-QL---AIAKETGRRLGMGTNMYP 211
I L D P I + +R+ +G+K MITGD L AIA E G
Sbjct: 440 IYLKDIVKPGIKERFAELRK-----MGIKTVMITGDNPLTAAAIAAEAG----------- 483
Query: 212 SSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDA 271
VD+ + +A PE K +++ QA + M G+G NDA
Sbjct: 484 -----------------VDDFLAEAT------PEDKLALIRQEQAEGRLVAMTGDGTNDA 520
Query: 272 PALKKADIGIAVADATDAARSAADIV 297
PAL +AD+G+A+ T AA+ A ++V
Sbjct: 521 PALAQADVGVAMNSGTQAAKEAGNMV 546
|
Length = 679 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 89.8 bits (223), Expect = 5e-19
Identities = 89/327 (27%), Positives = 134/327 (40%), Gaps = 74/327 (22%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGML 60
+D L DKTGTLT K V ++ F GVD + +AA Q + +
Sbjct: 517 LDTLVFDKTGTLTEGKPQVVA--VKTF-NGVDEAQALRLAAALEQGSSHPL--------- 564
Query: 61 ADPKEARADIQEVHFLPF-DPTGKRT-ALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIG 118
ARA + + + G RT + E + H + G+ LL+ +
Sbjct: 565 -----ARAILDKAGDMTLPQVNGFRTLRGLGVSGEAEGHALLLGNQ----ALLNEQQVDT 615
Query: 119 RKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRA 178
+ + A I A +G + +A + L+ + DP DS ++R
Sbjct: 616 KALEAEITAQASQGATPVLLAVDG-------------KAAALLAIRDPLRSDSVAALQRL 662
Query: 179 LSLGLGVKMITGDQL----AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIE 234
G + M+TGD AIAKE G +DE+I
Sbjct: 663 HKAGYRLVMLTGDNPTTANAIAKEAG----------------------------IDEVI- 693
Query: 235 KADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAA 294
AGV P+ K E +K LQ++ M+G+G+NDAPAL +AD+GIA+ +D A A
Sbjct: 694 -----AGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETA 748
Query: 295 DIVLTEPGLNVIITAVLISRAIFQRMR 321
I L L + A+ ISRA + M+
Sbjct: 749 AITLMRHSLMGVADALAISRATLRNMK 775
|
Length = 834 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 79.5 bits (196), Expect = 8e-16
Identities = 83/306 (27%), Positives = 130/306 (42%), Gaps = 66/306 (21%)
Query: 1 MDVLCCDKTGTLTL-NKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGM 59
+D L DKTGT+TL N+L + I A GVD T+ A AS + D + + +
Sbjct: 299 VDTLLLDKTGTITLGNRLASEF----IPAQGVDEKTLADAAQLASLAD--DTPEGKSIVI 352
Query: 60 LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLH-NKSKIG 118
LA R D + F +T ++ I+ + + KG+ + I + N I
Sbjct: 353 LAKQLGIREDDVQSLHATFVEFTAQTRMSGINLDNG-RMIRKGAVDAIKRHVEANGGHIP 411
Query: 119 RKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFD---PPIHDSAETI 175
++ +++ A +G L V E ++ G+I L D I + +
Sbjct: 412 TDLDQAVDQVARQGGTPLVVC-----EDNR--------IYGVIYLKDIVKGGIKERFAQL 458
Query: 176 RRALSLGLGVKMITGDQ----LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 231
R+ +G+ MITGD AIA E G VD+
Sbjct: 459 RK---MGIKTIMITGDNRLTAAAIAAEAG----------------------------VDD 487
Query: 232 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAAR 291
I +A PE K +++ QA + M G+G NDAPAL +AD+G+A+ T AA+
Sbjct: 488 FIAEAT------PEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAK 541
Query: 292 SAADIV 297
AA++V
Sbjct: 542 EAANMV 547
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 71.6 bits (176), Expect = 3e-13
Identities = 49/160 (30%), Positives = 67/160 (41%), Gaps = 32/160 (20%)
Query: 156 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL 215
+GLI L D D+ + I +LG+ M+TGD A LG+
Sbjct: 558 DVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGI---------- 607
Query: 216 SGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALK 275
D AG+ PE K + V L + M+G+G+NDAPA+K
Sbjct: 608 ---------------------DFRAGLLPEDKVKAVTELNQHAPL-AMVGDGINDAPAMK 645
Query: 276 KADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRA 315
A IGIA+ TD A AD LT L + + +SRA
Sbjct: 646 AASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRA 685
|
Length = 741 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 63.2 bits (153), Expect = 1e-10
Identities = 76/333 (22%), Positives = 136/333 (40%), Gaps = 70/333 (21%)
Query: 1 MDVLCCDKTGTLTL-NKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGM 59
++VL DKTGT+T N++ I + + + ++ AA S + + D + +
Sbjct: 298 VNVLILDKTGTITYGNRMADA--FIPVKSSSFER---LVKAAYESSIAD-DTPEGRSIVK 351
Query: 60 LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKS-KIG 118
LA + + ++PF + + + + E V KG+P ++ + I
Sbjct: 352 LAYKQHIDLPQEVGEYIPFTAETRMSGVKFTTRE-----VYKGAPNSMVKRVKEAGGHIP 406
Query: 119 RKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRA 178
++A++ +++G L V +G+I L D E R
Sbjct: 407 VDLDALVKGVSKKGGTPLVVLEDNE-------------ILGVIYLKDVIKDGLVERFREL 453
Query: 179 LSLGLGVKMITGD-QLA---IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIE 234
+G+ M TGD +L IAKE G VD +
Sbjct: 454 REMGIETVMCTGDNELTAATIAKEAG----------------------------VDRFVA 485
Query: 235 KADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAA 294
+ PE K +++ QA+ HI M G+G NDAPAL +A++G+A+ T +A+ AA
Sbjct: 486 ECK------PEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNSGTMSAKEAA 539
Query: 295 DIVLTEPGLNVIITAVLISRAIFQRMRNYMVRG 327
+++ + ++ VLI + + M RG
Sbjct: 540 NLIDLDSNPTKLMEVVLIGKQLL------MTRG 566
|
Length = 673 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 54.5 bits (131), Expect = 5e-09
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 219 DRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKAD 278
DR S+V L I FAG PE K +I++ L+ R M+GNG ND AL++AD
Sbjct: 54 DRKGSLVQLAEFVGIPVERVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREAD 113
Query: 279 IGIAV---ADATDAARSAADIVLTEPGLNVIITA 309
+GI + AD+VL E + +
Sbjct: 114 LGICTIQQEGVPERLLLTADVVLKEIAEILDLLK 147
|
Length = 152 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 49.2 bits (117), Expect = 7e-07
Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 19/121 (15%)
Query: 158 IGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSG 217
+GLI L DP + E ++ G+ + ++TGD A R LG+ + +S
Sbjct: 86 LGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGL-----FDALVSA 140
Query: 218 QDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKA 277
V P ++ E A ++ L + M+G+GVND PA K A
Sbjct: 141 DLYGLVGVGKPDPKIFELA--------------LEELGVKPEEVLMVGDGVNDIPAAKAA 186
Query: 278 D 278
Sbjct: 187 G 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|234910 PRK01158, PRK01158, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 2e-04
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 264 IGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEP 301
IG+ ND + A G+AVA+A + + AAD V +
Sbjct: 179 IGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKS 216
|
Length = 230 |
| >gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.001
Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 11/84 (13%)
Query: 230 DELIEKADGFAG------VFPEHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADI 279
+ L + G V +K + + L + I +G+G ND +K A +
Sbjct: 130 NRLEVEDGKLTGLVEGPIVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGL 189
Query: 280 GIAVADATDAARSAADIVLTEPGL 303
GIA +A + ADI + + L
Sbjct: 190 GIAF-NAKPKLQQKADICINKKDL 212
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219 |
| >gnl|CDD|232824 TIGR00099, Cof-subfamily, Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.002
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 263 MIGNGVNDAPALKKADIGIAVADATDAARSAADIV 297
G+G+ND L+ A G+A+ +A + ++ AD V
Sbjct: 209 AFGDGMNDIEMLEAAGYGVAMGNADEELKALADYV 243
|
This subfamily of sequences falls within the Class-IIB subfamily (TIGR01484) of the Haloacid Dehalogenase superfamily of aspartate-nucleophile hydrolases. The use of the name "Cof" as an identifier here is arbitrary and refers to the E. coli Cof protein. This subfamily is notable for the large number of recent paralogs in many species. Listeria, for instance, has 12, Clostridium, Lactococcus and Streptococcus pneumoniae have 8 each, Enterococcus and Salmonella have 7 each, and Bacillus subtilus, Mycoplasma, Staphylococcus and E. coli have 6 each. This high degree of gene duplication is limited to the gamma proteobacteria and low-GC gram positive lineages. The profusion of genes in this subfamily is not coupled with a high degree of divergence, so it is impossible to determine an accurate phylogeny at the equivalog level. Considering the relationship of this subfamily to the other known members of the HAD-IIB subfamily (TIGR01484), sucrose and trehalose phosphatases and phosphomannomutase, it seems a reasonable hypothesis that these enzymes act on phosphorylated sugars. Possibly the diversification of genes in this subfamily represents the diverse sugars and polysaccharides that various bacteria find in their biological niches. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences [Unknown function, Enzymes of unknown specificity]. Length = 256 |
| >gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 39.1 bits (92), Expect = 0.003
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 264 IGNGVNDAPALKKADIGIAVADATDAARSAADIV 297
G+G ND L+ A +G+A+ +A+ ++AAD V
Sbjct: 208 FGDGENDIEMLELAGLGVAMGNASPEVKAAADYV 241
|
This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 447 | |||
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.96 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.67 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.4 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.4 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.38 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.37 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.36 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.34 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.32 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.29 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.29 | |
| PLN02887 | 580 | hydrolase family protein | 99.24 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.22 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.21 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.2 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.15 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.15 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.14 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.12 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 99.08 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 99.03 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.02 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.98 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.94 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 98.93 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.88 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.8 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.74 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.73 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.64 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.63 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.55 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.54 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.51 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 98.49 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 98.43 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.42 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.39 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.37 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.33 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 98.33 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 98.32 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 98.27 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.26 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 98.23 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 98.14 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.11 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 98.1 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 98.06 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 98.04 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.02 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.97 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 97.95 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.95 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.89 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 97.88 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.87 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 97.84 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.8 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.76 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.76 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 97.73 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.7 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 97.67 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 97.63 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 97.59 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 97.55 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 97.48 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 97.43 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 97.43 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 97.43 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 97.37 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 97.36 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 97.36 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 97.33 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 97.33 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 97.3 | |
| PRK06769 | 173 | hypothetical protein; Validated | 97.28 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 97.27 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 97.26 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 97.22 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 97.18 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 97.18 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 97.15 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 97.12 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 97.12 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 97.06 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 97.06 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 97.02 | |
| PLN02580 | 384 | trehalose-phosphatase | 96.97 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 96.84 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 96.8 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 96.77 | |
| PLN02940 | 382 | riboflavin kinase | 96.77 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 96.76 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 96.76 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 96.74 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 96.7 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 96.67 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 96.65 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 96.44 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 96.41 | |
| PLN02811 | 220 | hydrolase | 96.41 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 96.34 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 96.33 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 96.31 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 96.25 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 96.19 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 96.16 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 96.12 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 95.98 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 95.96 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 95.87 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 95.86 | |
| PLN03017 | 366 | trehalose-phosphatase | 95.76 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 95.55 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 95.44 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 95.28 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 95.27 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 95.19 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 94.48 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 94.25 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 93.91 | |
| PLN02423 | 245 | phosphomannomutase | 93.71 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 93.42 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 93.25 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 93.05 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 92.84 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 92.28 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 91.96 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 91.53 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 91.32 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 91.24 | |
| PLN02151 | 354 | trehalose-phosphatase | 90.33 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 89.97 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 89.82 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 89.37 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 88.91 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 88.57 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 87.96 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 87.67 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 87.35 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 86.82 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 86.77 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 86.69 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 86.28 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 85.29 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 83.53 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 82.23 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 81.54 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 80.9 |
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-97 Score=744.90 Aligned_cols=437 Identities=74% Similarity=1.093 Sum_probs=416.4
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCchhhhccceEEEEEecCC
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDP 80 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~~~~~pF~~ 80 (447)
||++|+|||||||.|+++|++.+++++.+|.++++++..|+++++.+++|+||+|+++++.+|++++.+|++++++||||
T Consensus 327 mdVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~ikevhF~PFnP 406 (942)
T KOG0205|consen 327 MDVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGIKEVHFLPFNP 406 (942)
T ss_pred ceEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCceEEeeccCCc
Confidence 79999999999999999999999888999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEEEEecCCeEEEEEcCcHHHHHhhccCChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEEEEe
Q 013242 81 TGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGL 160 (447)
Q Consensus 81 ~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~lG~ 160 (447)
++||++++|.+++|++++++||+|++|+++|+.+.++++++++.+++|+++|+|.|+||++..|++.++..+.+|+|+|+
T Consensus 407 V~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~gl 486 (942)
T KOG0205|consen 407 VDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFVGL 486 (942)
T ss_pred cccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchh
Q 013242 161 IPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240 (447)
Q Consensus 161 i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 240 (447)
+++.||||+++.++|++....|+.|.|+|||....+++.++++|+.++++|+..+.|...++.+...+.++++++++.|+
T Consensus 487 lp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfA 566 (942)
T KOG0205|consen 487 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFA 566 (942)
T ss_pred cccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHH
Q 013242 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRM 320 (447)
Q Consensus 241 ~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~i 320 (447)
.+.|+||+++|+.||+++|.|+|+|||+||+|+||.||+|||+.+++++|+.++|+|+++++++.|..++..||.+|+||
T Consensus 567 gVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepglSviI~avltSraIfqrm 646 (942)
T KOG0205|consen 567 GVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRM 646 (942)
T ss_pred ccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH-hH---------------------------------------------------------------------
Q 013242 321 RNYMVRGI-DG--------------------------------------------------------------------- 330 (447)
Q Consensus 321 ~~~~~~~~-~~--------------------------------------------------------------------- 330 (447)
++|.+|++ ..
T Consensus 647 knytiyavsitiriv~gfml~alIw~~df~pfmvliiailnd~t~mtis~d~v~psp~pdswkl~~ifatgvVlgtyma~ 726 (942)
T KOG0205|consen 647 KNYTIYAVSITIRIVFGFMLIALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGTYMAI 726 (942)
T ss_pred hhheeeeehhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCCceEEEEcccCCCCCCCcccchhhhheeeeEehhHHHH
Confidence 99999984 11
Q ss_pred ------------------------------HHHHHHHHHHh---------------------------------------
Q 013242 331 ------------------------------LSSTEFIQVLE--------------------------------------- 341 (447)
Q Consensus 331 ------------------------------~~~~~~l~~~~--------------------------------------- 341 (447)
+++++|+++++
T Consensus 727 ~tvif~w~~~~t~ff~~~f~v~~~~~~~~~~~~a~ylqvsi~sqaliFvtrsr~w~~~erpg~~L~~af~~aqliatlia 806 (942)
T KOG0205|consen 727 MTVIFFWAAYTTDFFPRTFGVRSLFGNEHELMSALYLQVSIISQALIFVTRSRSWSFVERPGWLLLIAFFAAQLIATLIA 806 (942)
T ss_pred HHHHHhhhhccccccccccceeeccCCHHHHHHhhhhhheehhceeeEEEeccCCccccCcHHHHHHHHHHHHHHHHHHH
Confidence 22333333333
Q ss_pred -------------------------hcccccHHHHHHH---------------HHhcccCCcccchhHHHHHHHHHHHhh
Q 013242 342 -------------------------LNFLFTLDTVIAI---------------LQTAFTSKKDFGKEERELLWAHAQRTL 381 (447)
Q Consensus 342 -------------------------~~~~~pl~~~~~l---------------~~~~~~~~~~~~~~~~~~~w~~~~~~l 381 (447)
+.+|+|++.+.+. ++++|+..++||++.++.+|+..||++
T Consensus 807 vya~w~~a~i~~igw~w~gviw~ysi~~y~~ld~~kf~~~y~lsg~a~~~~~~~k~~~~~kk~~~~~~~~a~~~~~qrt~ 886 (942)
T KOG0205|consen 807 VYANWSFARITGIGWGWAGVIWLYSIVFYIPLDILKFIIRYALSGKAWDRLIENKTAFTTKKDYGKEEREAQWALAQRTL 886 (942)
T ss_pred HHheecccceecceeeeeeeEEEEEEEEEEechhhheehhhhhhhhHHHHHhcCcchhhhccccchhhhhhHHHHhhhhh
Confidence 5567888888884 578899999999999999999999999
Q ss_pred hcCCCCCCccccccccccccchhhHHHHhhhhHHhhhhhhcccchhhhhhhccCCChhhhhccccC
Q 013242 382 HGLQPPDTSMFSVRSSYGELSWMAEEARRRAEIARLRELHTLKGHVESLIRLKGLDIDAIQQSYSV 447 (447)
Q Consensus 382 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 447 (447)
||+|+++ .+|||++|||++||+|+|||||+||||||||||+||||+|+++| |||||
T Consensus 887 ~~lq~~~---------~~~~~~~a~~~~~~ae~~r~~e~~~l~g~vesv~klk~~d~~~~-~~~t~ 942 (942)
T KOG0205|consen 887 HGLQPPE---------GRELSEIAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETI-QHYTV 942 (942)
T ss_pred cccCCCc---------cchhhHHHHHHhhhhhhhhccchhhhhhhhHhhhhhcccchhhh-hhccC
Confidence 9999994 27899999999999999999999999999999999999999999 99997
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-69 Score=594.86 Aligned_cols=366 Identities=33% Similarity=0.473 Sum_probs=303.0
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCC---------hHHHHHHHHHhcCC--C------CCChHHHHHHHhhCC-
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVD---------ADTVVLMAARASQV--E------NLDVIDAAIVGMLAD- 62 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~---------~~~~l~~a~~~~~~--~------~~~pi~~ai~~~~~~- 62 (447)
||+||||||||||+|+|+|.++++..-....+ ..+++..++.|+.. . ..||.|.|++.++.+
T Consensus 348 v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~~gdptE~Al~~~a~~~ 427 (917)
T COG0474 348 VDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFAEKL 427 (917)
T ss_pred ccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCceecCCccHHHHHHHHHhc
Confidence 68999999999999999999987642011122 11355666666532 2 358999999998754
Q ss_pred -----chhhhccceEEEEEecCCCCceEEEEEEecCCeEEEEEcCcHHHHHhhccC-------ChhhHHHHHHHHHHHHH
Q 013242 63 -----PKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN-------KSKIGRKVNAVINKFAE 130 (447)
Q Consensus 63 -----~~~~~~~~~~~~~~pF~~~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~-------~~~~~~~~~~~~~~~~~ 130 (447)
....+..+++++.+||+|.+|||++++++.+|+++.++|||||.|++.|.. .++..+.+.+..++|++
T Consensus 428 ~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~ 507 (917)
T COG0474 428 GFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELAS 507 (917)
T ss_pred CCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHH
Confidence 233455667799999999999999999977788999999999999998873 45677889999999999
Q ss_pred hhhhhhhhhhcccCCCCc----CCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 013242 131 RGLRSLAVAYQEVPEGSK----ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 206 (447)
Q Consensus 131 ~G~r~l~vA~~~~~~~~~----~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~ 206 (447)
+|+|+|++||+.++..+. ++.|++++|+|+++++||||++++++|+.|+++||+|||+||||..||.+||++||+.
T Consensus 508 ~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~ 587 (917)
T COG0474 508 EGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIE 587 (917)
T ss_pred HHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCC
Confidence 999999999998765544 5789999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEec-C
Q 013242 207 TNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-D 285 (447)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~-~ 285 (447)
.+.....++.|.+.+...+. ++.+.++++.+|||++|+||.++|+.||++|+.|+|+|||+||+||||+|||||||+ +
T Consensus 588 ~~~~~~~vi~G~el~~l~~~-el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~ 666 (917)
T COG0474 588 AEAESALVIDGAELDALSDE-ELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGE 666 (917)
T ss_pred CCCCceeEeehHHhhhcCHH-HHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEeccc
Confidence 65443446667665533222 566788888999999999999999999999999999999999999999999999998 6
Q ss_pred chHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHhhc--ccccHHHHHHH-HHhcccC
Q 013242 286 ATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI-DGLSSTEFIQVLELN--FLFTLDTVIAI-LQTAFTS 361 (447)
Q Consensus 286 a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~i~~~~~~~~-~~~~~~~~l~~~~~~--~~~pl~~~~~l-~~~~~~~ 361 (447)
|++++|++||+++.++++..|..+|.+||++|.|+++++.|.+ .++...+++..+.++ +++|+.+++++ ..+.++.
T Consensus 667 Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p~~~~qll~inll~d~ 746 (917)
T COG0474 667 GTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDS 746 (917)
T ss_pred HHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999 554434333333322 34799999998 4444444
Q ss_pred Ccccch
Q 013242 362 KKDFGK 367 (447)
Q Consensus 362 ~~~~~~ 367 (447)
.+.+..
T Consensus 747 ~pa~~L 752 (917)
T COG0474 747 LPALAL 752 (917)
T ss_pred hhhhee
Confidence 444443
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-64 Score=548.00 Aligned_cols=344 Identities=55% Similarity=0.859 Sum_probs=293.2
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCchhhhccceEEEEEecCC
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDP 80 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~~~~~pF~~ 80 (447)
+|+||||||||||+|+|+|.+.+. ...+.+.++++.+++.++...+.||+|.|++.++.+.+..+..++.++.+||++
T Consensus 286 v~~i~~DKTGTLT~~~~~v~~~~~--~~~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~ 363 (755)
T TIGR01647 286 MDILCSDKTGTLTLNKLSIDEILP--FFNGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDP 363 (755)
T ss_pred CcEEEecCCCccccCceEEEEEEe--cCCCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCC
Confidence 689999999999999999998653 222367888899988776555668999999998766554566788899999999
Q ss_pred CCceEEEEEEecC-CeEEEEEcCcHHHHHhhccCChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEEEE
Q 013242 81 TGKRTALTYIDSE-GKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIG 159 (447)
Q Consensus 81 ~~kr~~v~~~~~~-g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~lG 159 (447)
.+|+|++++.+.+ |+.+.++||+|+.|+++|....+.++.+++.+++++++|+|++++|+++ .|++|+|+|
T Consensus 364 ~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~--------~e~~l~~~G 435 (755)
T TIGR01647 364 VDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDELASRGYRALGVARTD--------EEGRWHFLG 435 (755)
T ss_pred CCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEc--------CCCCcEEEE
Confidence 9999999887653 7788899999999999998766777888899999999999999999973 367899999
Q ss_pred eccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccch
Q 013242 160 LIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 239 (447)
Q Consensus 160 ~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 239 (447)
+++|+|||||+++++|++|+++||+|+|+|||++.+|.++|+++||..+.+....+......+.+...+++++++++++|
T Consensus 436 li~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vf 515 (755)
T TIGR01647 436 LLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGF 515 (755)
T ss_pred EeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEE
Confidence 99999999999999999999999999999999999999999999997543322222211112233344567788899999
Q ss_pred hccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHH
Q 013242 240 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQR 319 (447)
Q Consensus 240 a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~ 319 (447)
|+++|+||.++|+.+|++|++|+|+|||+||+|||++|||||||+++++.|+++||+|+++++|..|+.++++||++|+|
T Consensus 516 Ar~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~n 595 (755)
T TIGR01647 516 AEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQR 595 (755)
T ss_pred EecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH-hHHHHHHHHHHHhhcccccHHHHHHH
Q 013242 320 MRNYMVRGI-DGLSSTEFIQVLELNFLFTLDTVIAI 354 (447)
Q Consensus 320 i~~~~~~~~-~~~~~~~~l~~~~~~~~~pl~~~~~l 354 (447)
|++|+.|.+ .++..++++..+.+++.+|+.+++++
T Consensus 596 i~k~i~~~~~~n~~~~~~~~~~~l~~~~~l~~~~il 631 (755)
T TIGR01647 596 MKSYVIYRIAETIRIVFFFGLLILILNFYFPPIMVV 631 (755)
T ss_pred HHHHHHHHhcccHHHHHHHHHHHHHhCcchhHHHHH
Confidence 999999999 55555544444444444678998887
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-64 Score=523.15 Aligned_cols=353 Identities=30% Similarity=0.454 Sum_probs=286.9
Q ss_pred CcEEEecchhhcccCceEEEeeEeeccc-----------CCCC---------------------hHHHHHHHHHhcCC--
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFA-----------GGVD---------------------ADTVVLMAARASQV-- 46 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~-----------~~~~---------------------~~~~l~~a~~~~~~-- 46 (447)
+++||+|||||||+|+|++.+.++.-.. .+++ -.+++..++.|...
T Consensus 332 ~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v 411 (972)
T KOG0202|consen 332 VNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATV 411 (972)
T ss_pred eeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccHHHHHHHHHHHhhhhhhh
Confidence 4799999999999999999997752110 0111 11344455555321
Q ss_pred ----C-----CCChHHHHHHHhhCC---ch-----h-----------hhccceEEEEEecCCCCceEEEEEEecCCe--E
Q 013242 47 ----E-----NLDVIDAAIVGMLAD---PK-----E-----------ARADIQEVHFLPFDPTGKRTALTYIDSEGK--M 96 (447)
Q Consensus 47 ----~-----~~~pi~~ai~~~~~~---~~-----~-----------~~~~~~~~~~~pF~~~~kr~~v~~~~~~g~--~ 96 (447)
. ...|.+.|+..++.. ++ . ....++.+..+||++.+|+|++.+.+..|+ +
T Consensus 412 ~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~ 491 (972)
T KOG0202|consen 412 EYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGY 491 (972)
T ss_pred hcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeecccccceEEEEEecCCCCccc
Confidence 1 235788888765421 11 0 112345568999999999999999986664 7
Q ss_pred EEEEcCcHHHHHhhcc------------CChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCC-----------CcCCCCC
Q 013242 97 HRVTKGSPEQILNLLH------------NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEG-----------SKESSGS 153 (447)
Q Consensus 97 ~~~~KGa~e~i~~~~~------------~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~-----------~~~~~e~ 153 (447)
..|.|||+|.|+++|+ .++..++.+.+...+|+++|+|||++|++..+.. .+...|.
T Consensus 492 ~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~~~~~l~~~s~~~~~E~ 571 (972)
T KOG0202|consen 492 KMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVPDDQDLNDTSNRATAES 571 (972)
T ss_pred eEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccChhhhhhccccccccccc
Confidence 8999999999999994 2345678899999999999999999999977631 2456789
Q ss_pred CcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--CcccccCCcchhhhhcCChhH
Q 013242 154 PWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSALSGQDRDESIVALPVDE 231 (447)
Q Consensus 154 ~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~--~~~~~~~~~~~~~~~~~~~~~ 231 (447)
+|+|+|++++.||||++++++|+.|+++||+|+|+|||+..||++||+++|+.++.. ....+.|.+.++ +...+.++
T Consensus 572 ~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~-ls~~~~~~ 650 (972)
T KOG0202|consen 572 DLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDD-LSDEELDD 650 (972)
T ss_pred ceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhc-CCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999976433 345556655542 33444566
Q ss_pred HHhhccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEec-CchHHHHhhcchhccCCChhHHHHHH
Q 013242 232 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 232 ~~~~~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~-~a~~~a~~aAD~vl~~~~~~~i~~~i 310 (447)
......+|+|+.|.||.+||+.||++|..|+|+|||+||+||||.|||||||| +|+++||+|||+||.+|||+.|+.||
T Consensus 651 ~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAV 730 (972)
T KOG0202|consen 651 AVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAV 730 (972)
T ss_pred HhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHH
Confidence 77888899999999999999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHhhc-ccccHHHHHHH
Q 013242 311 LISRAIFQRMRNYMVRGI-DGLSSTEFIQVLELN-FLFTLDTVIAI 354 (447)
Q Consensus 311 ~~~r~~~~~i~~~~~~~~-~~~~~~~~l~~~~~~-~~~pl~~~~~l 354 (447)
++||.+|.||++|+.|.+ .++...++++.+..+ ...||.++|+|
T Consensus 731 EEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiL 776 (972)
T KOG0202|consen 731 EEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQIL 776 (972)
T ss_pred HHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhh
Confidence 999999999999999999 666666555555544 45899999999
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-63 Score=545.37 Aligned_cols=346 Identities=28% Similarity=0.455 Sum_probs=288.6
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCC--CCCChHHHHHHHhhCCch--hhhccceEEEEE
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQV--ENLDVIDAAIVGMLADPK--EARADIQEVHFL 76 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~--~~~~pi~~ai~~~~~~~~--~~~~~~~~~~~~ 76 (447)
+|+||||||||||+|+|+|.+.+. ..+.+.++++.+++.++.. ...||+|.|++.++.... ..+..++.++.+
T Consensus 369 v~vIc~DKTGTLT~~~m~V~~~~~---~~~~~~~~~l~~a~l~s~~~~~~~~p~e~All~~a~~~~~~~~~~~~~~~~~~ 445 (903)
T PRK15122 369 MDVLCTDKTGTLTQDRIILEHHLD---VSGRKDERVLQLAWLNSFHQSGMKNLMDQAVVAFAEGNPEIVKPAGYRKVDEL 445 (903)
T ss_pred CcEEEecCCcccccCeEEEEEEEc---CCCCChHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHcCchhhhhcCceEEEe
Confidence 689999999999999999988541 2244556777777654322 234799999999875422 123467889999
Q ss_pred ecCCCCceEEEEEEecCCeEEEEEcCcHHHHHhhccC----------ChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCC
Q 013242 77 PFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN----------KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEG 146 (447)
Q Consensus 77 pF~~~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~ 146 (447)
||++.+|+|++++++.+|+++.++||+||.|+++|.. +++..+++.+..++++++|+|++++||+.++..
T Consensus 446 pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~ 525 (903)
T PRK15122 446 PFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGG 525 (903)
T ss_pred eeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCcc
Confidence 9999999999998877788899999999999999962 223456678888999999999999999987654
Q ss_pred Cc-----CCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcch
Q 013242 147 SK-----ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRD 221 (447)
Q Consensus 147 ~~-----~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~ 221 (447)
+. +..|++++|+|+++|+|||||+++++|++|+++||+|+|+|||++.+|.++|+++||.. ..++.|.+.+
T Consensus 526 ~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~----~~vi~G~el~ 601 (903)
T PRK15122 526 ESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP----GEPLLGTEIE 601 (903)
T ss_pred ccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC----CCccchHhhh
Confidence 32 23578999999999999999999999999999999999999999999999999999963 2345555544
Q ss_pred hhhhcCChhHHHhhccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCC
Q 013242 222 ESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEP 301 (447)
Q Consensus 222 ~~~~~~~~~~~~~~~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~ 301 (447)
.+...++.+.++++.+|||++|+||.++|+.||++|++|+|+|||+||+|||++|||||||++++|.|+++||+|++++
T Consensus 602 -~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg~gtdvAkeaADiVLldd 680 (903)
T PRK15122 602 -AMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVDSGADIAKESADIILLEK 680 (903)
T ss_pred -hCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeCcccHHHHHhcCEEEecC
Confidence 2334456777888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHH-HhhcccccHHHHHHH
Q 013242 302 GLNVIITAVLISRAIFQRMRNYMVRGI-DGLSSTEFIQV-LELNFLFTLDTVIAI 354 (447)
Q Consensus 302 ~~~~i~~~i~~~r~~~~~i~~~~~~~~-~~~~~~~~l~~-~~~~~~~pl~~~~~l 354 (447)
+|+.|+.++++||++|+||++|+.|.+ .++..++.+.+ .++.+++|+.++++|
T Consensus 681 ~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil 735 (903)
T PRK15122 681 SLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLL 735 (903)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHH
Confidence 999999999999999999999999999 44333332222 233456899999998
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-62 Score=543.48 Aligned_cols=346 Identities=29% Similarity=0.471 Sum_probs=289.6
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCC--CCChHHHHHHHhhCCch--hhhccceEEEEE
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVE--NLDVIDAAIVGMLADPK--EARADIQEVHFL 76 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~--~~~pi~~ai~~~~~~~~--~~~~~~~~~~~~ 76 (447)
||+||||||||||+|+|+|.+.+ . ..+.+.++++.+++.++... ..||+|.|++.++.... .....++.++.+
T Consensus 371 v~vic~DKTGTLT~n~m~V~~~~-~--~~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~~~~~~~~~~~~~ 447 (902)
T PRK10517 371 MDILCTDKTGTLTQDKIVLENHT-D--ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESARSLASRWQKIDEI 447 (902)
T ss_pred CCEEEecCCCccccceEEEEEEe-c--CCCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchhhhhhcCceEEEe
Confidence 68999999999999999998753 1 22455677888877655432 35799999998875422 234568889999
Q ss_pred ecCCCCceEEEEEEecCCeEEEEEcCcHHHHHhhccC----------ChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCC
Q 013242 77 PFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN----------KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEG 146 (447)
Q Consensus 77 pF~~~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~ 146 (447)
||++.+|+|++++.+.++.+..++||+||.|+++|.. +++..+.+.+..++++++|+|++++||++++..
T Consensus 448 pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~ 527 (902)
T PRK10517 448 PFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAR 527 (902)
T ss_pred eeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCcc
Confidence 9999999999988876777889999999999999962 223456677888999999999999999987643
Q ss_pred CcC---CCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhh
Q 013242 147 SKE---SSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDES 223 (447)
Q Consensus 147 ~~~---~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~ 223 (447)
+.+ ..|++++|+|+++|+|||||+++++|++|+++||+|+|+|||++.+|.++|+++||.. ..++.|.+.+ .
T Consensus 528 ~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~----~~v~~G~el~-~ 602 (902)
T PRK10517 528 EGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA----GEVLIGSDIE-T 602 (902)
T ss_pred ccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc----cCceeHHHHH-h
Confidence 321 2477999999999999999999999999999999999999999999999999999952 3455555443 2
Q ss_pred hhcCChhHHHhhccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCCh
Q 013242 224 IVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGL 303 (447)
Q Consensus 224 ~~~~~~~~~~~~~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~ 303 (447)
+...++.+.++++.+|+|++|+||.++|+.||++|++|+|+|||+||+|||++|||||||++++|+|+++||+|+++++|
T Consensus 603 l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAkeaADiVLldd~~ 682 (902)
T PRK10517 603 LSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAADIILLEKSL 682 (902)
T ss_pred CCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHHHHHhCCEEEecCCh
Confidence 34445677888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHh-hcccccHHHHHHH
Q 013242 304 NVIITAVLISRAIFQRMRNYMVRGI-DGLSSTEFIQVLE-LNFLFTLDTVIAI 354 (447)
Q Consensus 304 ~~i~~~i~~~r~~~~~i~~~~~~~~-~~~~~~~~l~~~~-~~~~~pl~~~~~l 354 (447)
..|+.++++||++|+||++|+.|.+ .++..++.+.++. +.+++|+.++++|
T Consensus 683 ~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL 735 (902)
T PRK10517 683 MVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLL 735 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHH
Confidence 9999999999999999999999999 4443333333333 3456899999998
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-62 Score=537.20 Aligned_cols=346 Identities=27% Similarity=0.443 Sum_probs=288.0
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCC--CCCChHHHHHHHhhCCc--hhhhccceEEEEE
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQV--ENLDVIDAAIVGMLADP--KEARADIQEVHFL 76 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~--~~~~pi~~ai~~~~~~~--~~~~~~~~~~~~~ 76 (447)
+|+||||||||||+|+|+|.+.+ ...+.+.++++.+++.++.. ...||+|.|++.++... ...+..++.++.+
T Consensus 336 v~vic~DKTGTLT~~~m~v~~~~---~~~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~~~ 412 (867)
T TIGR01524 336 MDILCTDKTGTLTQDKIELEKHI---DSSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQTASRWKKVDEI 412 (867)
T ss_pred ccEEEecCCCccccCeEEEEEEe---cCCCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhchhhHhhcCceEEEe
Confidence 68999999999999999998853 12345567778777765442 23479999999887542 2234567889999
Q ss_pred ecCCCCceEEEEEEecCCeEEEEEcCcHHHHHhhccC----------ChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCC
Q 013242 77 PFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN----------KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEG 146 (447)
Q Consensus 77 pF~~~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~ 146 (447)
||+|.+|+|++++.+.++..+.++||+|+.|+++|.. +++..+++.+.+++++++|+|++++||++++..
T Consensus 413 pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~ 492 (867)
T TIGR01524 413 PFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVG 492 (867)
T ss_pred ccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcc
Confidence 9999999999998865666789999999999999962 233456788888999999999999999988654
Q ss_pred Cc---CCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhh
Q 013242 147 SK---ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDES 223 (447)
Q Consensus 147 ~~---~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~ 223 (447)
+. +..|++|+|+|+++|+||||++++++|++|+++||+|+|+|||+..+|.++|+++||.++ .++.|.+.+ .
T Consensus 493 ~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~----~v~~g~~l~-~ 567 (867)
T TIGR01524 493 EADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAN----DFLLGADIE-E 567 (867)
T ss_pred cccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC----CeeecHhhh-h
Confidence 32 124788999999999999999999999999999999999999999999999999999632 345554443 2
Q ss_pred hhcCChhHHHhhccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCCh
Q 013242 224 IVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGL 303 (447)
Q Consensus 224 ~~~~~~~~~~~~~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~ 303 (447)
+...++.+.++++.+|||++|+||.++|+.+|++|++|+|+|||+||+|||+.|||||||++|++.|+++||+|+++++|
T Consensus 568 ~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~aADiVLldd~~ 647 (867)
T TIGR01524 568 LSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKEASDIILLEKSL 647 (867)
T ss_pred CCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHHHHHhCCEEEecCCh
Confidence 23345667788889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHh-hcccccHHHHHHH
Q 013242 304 NVIITAVLISRAIFQRMRNYMVRGI-DGLSSTEFIQVLE-LNFLFTLDTVIAI 354 (447)
Q Consensus 304 ~~i~~~i~~~r~~~~~i~~~~~~~~-~~~~~~~~l~~~~-~~~~~pl~~~~~l 354 (447)
+.|+.++++||++|+||++|+.|.+ .++..++.+.++. +.+++|+.+++++
T Consensus 648 ~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil 700 (867)
T TIGR01524 648 MVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLL 700 (867)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHH
Confidence 9999999999999999999999999 4443333333333 3456899999998
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-61 Score=541.22 Aligned_cols=353 Identities=27% Similarity=0.428 Sum_probs=283.7
Q ss_pred CcEEEecchhhcccCceEEEeeEeec---c-----cCCC---------------------------------------C-
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEI---F-----AGGV---------------------------------------D- 32 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~---~-----~~~~---------------------------------------~- 32 (447)
+++||+|||||||+|+|+|.+.++.. + ..++ +
T Consensus 359 vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (1053)
T TIGR01523 359 VNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDL 438 (1053)
T ss_pred ccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCCCCccccccccccccccccccccccccccccccccccccccc
Confidence 68999999999999999999876421 0 0000 0
Q ss_pred --------hHHHHHHHHHhcCCC------------CCChHHHHHHHhhCCch----------hh----------------
Q 013242 33 --------ADTVVLMAARASQVE------------NLDVIDAAIVGMLADPK----------EA---------------- 66 (447)
Q Consensus 33 --------~~~~l~~a~~~~~~~------------~~~pi~~ai~~~~~~~~----------~~---------------- 66 (447)
...++..++.|+... ..||.|.|++.++...+ +.
T Consensus 439 ~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (1053)
T TIGR01523 439 PEDIDMDLFIKLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNE 518 (1053)
T ss_pred ccccccHHHHHHHHHHHhccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccc
Confidence 013555566554211 24899999998753111 00
Q ss_pred ---hccceEEEEEecCCCCceEEEEEEecCC-eEEEEEcCcHHHHHhhccC------------ChhhHHHHHHHHHHHHH
Q 013242 67 ---RADIQEVHFLPFDPTGKRTALTYIDSEG-KMHRVTKGSPEQILNLLHN------------KSKIGRKVNAVINKFAE 130 (447)
Q Consensus 67 ---~~~~~~~~~~pF~~~~kr~~v~~~~~~g-~~~~~~KGa~e~i~~~~~~------------~~~~~~~~~~~~~~~~~ 130 (447)
+..|+.++.+||+|.+|||++++++.++ .+++|+|||||.|+++|.. +++..+.+.+.+++|++
T Consensus 519 ~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~ 598 (1053)
T TIGR01523 519 KPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAA 598 (1053)
T ss_pred cccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHh
Confidence 2357889999999999999999987544 4789999999999999962 12346678888999999
Q ss_pred hhhhhhhhhhcccCCCC------------cCCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHH
Q 013242 131 RGLRSLAVAYQEVPEGS------------KESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKE 198 (447)
Q Consensus 131 ~G~r~l~vA~~~~~~~~------------~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ 198 (447)
+|+|||++||+.++.++ ++..|++|+|+|+++++||||++++++|+.|+++||+|+|+|||++.+|.+
T Consensus 599 ~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~ 678 (1053)
T TIGR01523 599 EGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKA 678 (1053)
T ss_pred cCCeEEEEEEEECCchhccchhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHH
Confidence 99999999999886532 234588999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCC--------CcccccCCcchhhhhcCChhHHHhhccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCc
Q 013242 199 TGRRLGMGTNMY--------PSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVND 270 (447)
Q Consensus 199 ia~~lGi~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND 270 (447)
+|+++||.+... ...++.|.+.+. +...++.++++.+.+|||++|+||.++|+.+|++|+.|+|+|||+||
T Consensus 679 iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~-l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvND 757 (1053)
T TIGR01523 679 IAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDA-LSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVND 757 (1053)
T ss_pred HHHHcCCCCccccccccccccceeeehHHhhh-cCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcch
Confidence 999999964311 124555554432 23334556677788999999999999999999999999999999999
Q ss_pred hhHHhhcCeeEEec-CchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHhhc-----
Q 013242 271 APALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI-DGLSSTEFIQVLELN----- 343 (447)
Q Consensus 271 ~~al~~A~vGIa~~-~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~i~~~~~~~~-~~~~~~~~l~~~~~~----- 343 (447)
+|||+.|||||||| ++++.|+++||+|+.+++|+.|..+|.+||++|+|+++++.|.+ .++..++++..+.++
T Consensus 758 apaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g 837 (1053)
T TIGR01523 758 SPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENG 837 (1053)
T ss_pred HHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccC
Confidence 99999999999998 89999999999999999999999999999999999999999999 555444444444443
Q ss_pred -ccccHHHHHHH
Q 013242 344 -FLFTLDTVIAI 354 (447)
Q Consensus 344 -~~~pl~~~~~l 354 (447)
..+|+.++++|
T Consensus 838 ~~~~Pl~~~qiL 849 (1053)
T TIGR01523 838 KSVFPLSPVEIL 849 (1053)
T ss_pred CCcCchHHHHHH
Confidence 24799999998
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-62 Score=502.18 Aligned_cols=352 Identities=25% Similarity=0.356 Sum_probs=292.6
Q ss_pred cEEEecchhhcccCceEEEeeEeecccCC--------CChH--HHHHHHHHh-cC--------C-----CCCChHHHHHH
Q 013242 2 DVLCCDKTGTLTLNKLTVDKNLIEIFAGG--------VDAD--TVVLMAARA-SQ--------V-----ENLDVIDAAIV 57 (447)
Q Consensus 2 ~~i~~DKTGTLT~n~~~v~~~~i~~~~~~--------~~~~--~~l~~a~~~-~~--------~-----~~~~pi~~ai~ 57 (447)
++||+|||||||+|.|+|.+.++....+. .++. +++..+-.. +. . -..+|.++|++
T Consensus 436 T~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL 515 (1034)
T KOG0204|consen 436 TAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALL 515 (1034)
T ss_pred eEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHH
Confidence 57999999999999999999776322111 2221 122111111 10 0 01368999999
Q ss_pred HhhC----CchhhhccceEEEEEecCCCCceEEEEEEecCCeEEEEEcCcHHHHHhhcc-----------CChhhHHHHH
Q 013242 58 GMLA----DPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLH-----------NKSKIGRKVN 122 (447)
Q Consensus 58 ~~~~----~~~~~~~~~~~~~~~pF~~~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~-----------~~~~~~~~~~ 122 (447)
++.. +....|...+.++++||||.+|+|+++++.++|..+.++|||+|.|+..|. .+++....++
T Consensus 516 ~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~ 595 (1034)
T KOG0204|consen 516 GFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFK 595 (1034)
T ss_pred HHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHH
Confidence 8753 445567788899999999999999999997776623999999999999996 2344556899
Q ss_pred HHHHHHHHhhhhhhhhhhcccCCCC--------cCCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHH
Q 013242 123 AVINKFAERGLRSLAVAYQEVPEGS--------KESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLA 194 (447)
Q Consensus 123 ~~~~~~~~~G~r~l~vA~~~~~~~~--------~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~ 194 (447)
..++.|+.+|+|++|+||+++++.+ .+.++++++++|+++++||.||+++++|+.|+.+||.|.|+||||..
T Consensus 596 ~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~ 675 (1034)
T KOG0204|consen 596 DVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNIN 675 (1034)
T ss_pred HHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHH
Confidence 9999999999999999999854331 13567899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHH
Q 013242 195 IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPAL 274 (447)
Q Consensus 195 ~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al 274 (447)
||++||.+|||.++......+.|.+.. .+...+.++++.+..++||.+|.||+.+|+.|+.+|++|+.+|||.||+|||
T Consensus 676 TAkAIA~eCGILt~~~d~~~lEG~eFr-~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPAL 754 (1034)
T KOG0204|consen 676 TAKAIARECGILTPGGDFLALEGKEFR-ELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPAL 754 (1034)
T ss_pred HHHHHHHHcccccCCCccceecchhhh-hcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhh
Confidence 999999999998876666777777665 4556677888999999999999999999999999999999999999999999
Q ss_pred hhcCeeEEec-CchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHhh-cccccHHHH
Q 013242 275 KKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI-DGLSSTEFIQVLEL-NFLFTLDTV 351 (447)
Q Consensus 275 ~~A~vGIa~~-~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~i~~~~~~~~-~~~~~~~~l~~~~~-~~~~pl~~~ 351 (447)
++||||.||| .++++||++||+|+++|+|++|+.++.|||++|.||+||++|.+ .++...+.-+++.. ..-.||..+
T Consensus 755 keADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAV 834 (1034)
T KOG0204|consen 755 KEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAV 834 (1034)
T ss_pred hhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHH
Confidence 9999999999 79999999999999999999999999999999999999999999 55544444444443 346899999
Q ss_pred HHH
Q 013242 352 IAI 354 (447)
Q Consensus 352 ~~l 354 (447)
|+|
T Consensus 835 QlL 837 (1034)
T KOG0204|consen 835 QLL 837 (1034)
T ss_pred HHH
Confidence 997
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-60 Score=532.64 Aligned_cols=351 Identities=25% Similarity=0.379 Sum_probs=284.2
Q ss_pred CcEEEecchhhcccCceEEEeeEeeccc---CC----CC--hHHHHHHHHHhcCC------------CCCChHHHHHHHh
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFA---GG----VD--ADTVVLMAARASQV------------ENLDVIDAAIVGM 59 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~---~~----~~--~~~~l~~a~~~~~~------------~~~~pi~~ai~~~ 59 (447)
||+||||||||||+|+|+|.+++..... .+ .+ ..+++..++.++.. ...||+|.|++.+
T Consensus 376 v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~ 455 (941)
T TIGR01517 376 ATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGF 455 (941)
T ss_pred ceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHH
Confidence 6899999999999999999987642110 00 01 12233333333211 1247999999988
Q ss_pred hCC----chhhhccceEEEEEecCCCCceEEEEEEecCCeEEEEEcCcHHHHHhhccCC----------hhhHHHHHHHH
Q 013242 60 LAD----PKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNK----------SKIGRKVNAVI 125 (447)
Q Consensus 60 ~~~----~~~~~~~~~~~~~~pF~~~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~----------~~~~~~~~~~~ 125 (447)
+.. ..+.+..++.++.+||+|.+|+|+++++..+++++.++|||||.|++.|... .+..+.+.+.+
T Consensus 456 ~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~i~~~~ 535 (941)
T TIGR01517 456 LLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISDDKDRCADVI 535 (941)
T ss_pred HHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHHHHHHH
Confidence 642 2233456778899999999999999998766778999999999999999631 01346788889
Q ss_pred HHHHHhhhhhhhhhhcccCCCCc---CCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH
Q 013242 126 NKFAERGLRSLAVAYQEVPEGSK---ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR 202 (447)
Q Consensus 126 ~~~~~~G~r~l~vA~~~~~~~~~---~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~ 202 (447)
++|+++|+|++++||+.++.++. +..|++|+|+|+++++||||++++++|+.|+++||+|+|+|||++.+|.++|++
T Consensus 536 ~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~ 615 (941)
T TIGR01517 536 EPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARN 615 (941)
T ss_pred HHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHH
Confidence 99999999999999998864432 234789999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEE
Q 013242 203 LGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 282 (447)
Q Consensus 203 lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa 282 (447)
+||.++. ..++.|.+.+. +...++.+++.+..+|||++|+||.++|+.+|++|++|+|+|||+||+|||++||||||
T Consensus 616 ~GI~~~~--~~vi~G~~~~~-l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIA 692 (941)
T TIGR01517 616 CGILTFG--GLAMEGKEFRR-LVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFS 692 (941)
T ss_pred cCCCCCC--ceEeeHHHhhh-CCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCccee
Confidence 9997432 23555554432 33345667788889999999999999999999999999999999999999999999999
Q ss_pred ec-CchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHh-hcccccHHHHHHH
Q 013242 283 VA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI-DGLSSTEFIQVLE-LNFLFTLDTVIAI 354 (447)
Q Consensus 283 ~~-~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~i~~~~~~~~-~~~~~~~~l~~~~-~~~~~pl~~~~~l 354 (447)
|| ++++.|+++||+|+++++|+.|+.++++||++|+|+++++.|.+ .++..+++..++. +...+|+++++++
T Consensus 693 mg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil 767 (941)
T TIGR01517 693 MGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLL 767 (941)
T ss_pred cCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHH
Confidence 99 89999999999999999999999999999999999999999999 5555444444433 3356799999997
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-59 Score=523.34 Aligned_cols=353 Identities=26% Similarity=0.397 Sum_probs=281.2
Q ss_pred CcEEEecchhhcccCceEEEeeEeec--cc-CC--------CC-----hHHHHHHHHHhcCC---------------CCC
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEI--FA-GG--------VD-----ADTVVLMAARASQV---------------ENL 49 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~--~~-~~--------~~-----~~~~l~~a~~~~~~---------------~~~ 49 (447)
||+||||||||||+|+|+|.+++++. +. .+ .+ .+.++..++.|+.. ...
T Consensus 344 v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~g 423 (997)
T TIGR01106 344 TSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAG 423 (997)
T ss_pred CCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCc
Confidence 68999999999999999999876421 00 00 11 12455666666431 124
Q ss_pred ChHHHHHHHhhCC----chhhhccceEEEEEecCCCCceEEEEEEe--c-CCeEEEEEcCcHHHHHhhccC---------
Q 013242 50 DVIDAAIVGMLAD----PKEARADIQEVHFLPFDPTGKRTALTYID--S-EGKMHRVTKGSPEQILNLLHN--------- 113 (447)
Q Consensus 50 ~pi~~ai~~~~~~----~~~~~~~~~~~~~~pF~~~~kr~~v~~~~--~-~g~~~~~~KGa~e~i~~~~~~--------- 113 (447)
||.|.|++.++.. ..+.+..++.++.+||+|.+|||++++.. . ++++++|+|||||.|+++|..
T Consensus 424 dp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~ 503 (997)
T TIGR01106 424 DASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQP 503 (997)
T ss_pred ChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCccc
Confidence 7999999987642 23456678899999999999999988763 2 246789999999999999952
Q ss_pred -ChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCc--------C---CCCCCcEEEEeccCCCCCCcchHHHHHHHHhC
Q 013242 114 -KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK--------E---SSGSPWQFIGLIPLFDPPIHDSAETIRRALSL 181 (447)
Q Consensus 114 -~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~--------~---~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~ 181 (447)
+++..+.+.+.+++|+++|+|++++||+.++.++. + ..|++|+|+|+++++||||++++++|++|+++
T Consensus 504 l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~ 583 (997)
T TIGR01106 504 LDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSA 583 (997)
T ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChHHHHHHHHHHHHC
Confidence 23456778889999999999999999998864321 1 22789999999999999999999999999999
Q ss_pred CCeEEEEcCCcHHHHHHHHHHhCCCCCCCC----------------------cccccCCcchhhhhcCChhHHHhhcc--
Q 013242 182 GLGVKMITGDQLAIAKETGRRLGMGTNMYP----------------------SSALSGQDRDESIVALPVDELIEKAD-- 237 (447)
Q Consensus 182 Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~-- 237 (447)
||+|+|+|||++.+|.++|+++|+.++... ..++.|.+.+. +...++++++.++.
T Consensus 584 Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~-l~~~el~~~~~~~~~~ 662 (997)
T TIGR01106 584 GIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD-MTSEQLDEILKYHTEI 662 (997)
T ss_pred CCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhh-CCHHHHHHHHHhcCCE
Confidence 999999999999999999999999643210 12444444332 22234556666654
Q ss_pred chhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEec-CchHHHHhhcchhccCCChhHHHHHHHHHHHH
Q 013242 238 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAI 316 (447)
Q Consensus 238 v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~-~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~ 316 (447)
+|||++|+||.++|+.+|+.|++|+|+|||+||+|||+.|||||||| +|++.++++||+|+++++|+.|+.+|.+||++
T Consensus 663 VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i 742 (997)
T TIGR01106 663 VFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLI 742 (997)
T ss_pred EEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 68999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-hHHHHHHHHHHH-hhcccccHHHHHHH
Q 013242 317 FQRMRNYMVRGI-DGLSSTEFIQVL-ELNFLFTLDTVIAI 354 (447)
Q Consensus 317 ~~~i~~~~~~~~-~~~~~~~~l~~~-~~~~~~pl~~~~~l 354 (447)
|.|+++++.|.+ .++..++..+.+ ++..+.|+.++++|
T Consensus 743 ~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL 782 (997)
T TIGR01106 743 FDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITIL 782 (997)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHH
Confidence 999999999999 443333333322 33456799999997
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-58 Score=513.48 Aligned_cols=352 Identities=29% Similarity=0.414 Sum_probs=281.1
Q ss_pred CcEEEecchhhcccCceEEEeeEeecc-----------cCCCC-------------------hHHHHHHHHHhcCCC---
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIF-----------AGGVD-------------------ADTVVLMAARASQVE--- 47 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~-----------~~~~~-------------------~~~~l~~a~~~~~~~--- 47 (447)
||+||||||||||+|+|+|.+++.... ..+++ .+.++..++.|+...
T Consensus 289 v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~ 368 (917)
T TIGR01116 289 TTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDF 368 (917)
T ss_pred ceEEEecCCccccCCeEEEEEEEecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeec
Confidence 689999999999999999998764210 00000 123455556555321
Q ss_pred ---------CCChHHHHHHHhhCCch--------------------hhhccceEEEEEecCCCCceEEEEEEecCCeEEE
Q 013242 48 ---------NLDVIDAAIVGMLADPK--------------------EARADIQEVHFLPFDPTGKRTALTYIDSEGKMHR 98 (447)
Q Consensus 48 ---------~~~pi~~ai~~~~~~~~--------------------~~~~~~~~~~~~pF~~~~kr~~v~~~~~~g~~~~ 98 (447)
..||.|.|++.++.+.+ ..+..++.++.+||+|.+|||++++++ ++++++
T Consensus 369 ~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~ 447 (917)
T TIGR01116 369 NERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKL 447 (917)
T ss_pred cccCCceeeccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEE
Confidence 24899999998753211 124567789999999999999999885 467889
Q ss_pred EEcCcHHHHHhhccC-----------ChhhHHHHHHHHHHHHH-hhhhhhhhhhcccCCCC----------cCCCCCCcE
Q 013242 99 VTKGSPEQILNLLHN-----------KSKIGRKVNAVINKFAE-RGLRSLAVAYQEVPEGS----------KESSGSPWQ 156 (447)
Q Consensus 99 ~~KGa~e~i~~~~~~-----------~~~~~~~~~~~~~~~~~-~G~r~l~vA~~~~~~~~----------~~~~e~~~~ 156 (447)
|+|||||.|++.|.. +++..+++.+.+++|++ +|+||+++||+.++.+. ++..|++|+
T Consensus 448 ~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~ 527 (917)
T TIGR01116 448 FVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLT 527 (917)
T ss_pred EEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcE
Confidence 999999999999962 12346678888999999 99999999999986421 234588999
Q ss_pred EEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC--cccccCCcchhhhhcCChhHHHh
Q 013242 157 FIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP--SSALSGQDRDESIVALPVDELIE 234 (447)
Q Consensus 157 ~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 234 (447)
|+|+++++||||++++++|+.|+++||+++|+|||+..+|.++|+++|+..+... ...+.|.+.+ .+...+......
T Consensus 528 ~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~-~~~~~~~~~~~~ 606 (917)
T TIGR01116 528 FIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFD-EMGPAKQRAACR 606 (917)
T ss_pred EEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHh-hCCHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999999999753211 1233443322 122223445566
Q ss_pred hccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHH
Q 013242 235 KADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISR 314 (447)
Q Consensus 235 ~~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r 314 (447)
+..+|+|++|+||.++|+.+|+.|+.|+|+|||.||+|||+.|||||||+++++.++++||+++.+++|+.|.+++++||
T Consensus 607 ~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR 686 (917)
T TIGR01116 607 SAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGR 686 (917)
T ss_pred cCeEEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-hHHHHHHHHHHHhh-cccccHHHHHHH
Q 013242 315 AIFQRMRNYMVRGI-DGLSSTEFIQVLEL-NFLFTLDTVIAI 354 (447)
Q Consensus 315 ~~~~~i~~~~~~~~-~~~~~~~~l~~~~~-~~~~pl~~~~~l 354 (447)
++|+|+++++.|.+ .++...+.+..+.+ .++.|+++++++
T Consensus 687 ~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qll 728 (917)
T TIGR01116 687 AIYNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGLIPVQLL 728 (917)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHcCCchHHHHHHH
Confidence 99999999999999 55444444433333 345799999997
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-58 Score=521.22 Aligned_cols=350 Identities=23% Similarity=0.270 Sum_probs=272.4
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCC----------CChHHHHHHHHHhcCC------CCCChHHHHHHHhhCCch
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGG----------VDADTVVLMAARASQV------ENLDVIDAAIVGMLADPK 64 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~----------~~~~~~l~~a~~~~~~------~~~~pi~~ai~~~~~~~~ 64 (447)
||++|||||||||+|+|+|.+.+....... ......+...+.|+.. ...||+|.|++.+.+...
T Consensus 448 v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~~ 527 (1054)
T TIGR01657 448 IDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWTL 527 (1054)
T ss_pred eeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCEE
Confidence 689999999999999999998653211000 0112233333333321 135899999999864211
Q ss_pred hh-------------------hccceEEEEEecCCCCceEEEEEEec-CCeEEEEEcCcHHHHHhhccCChhhHHHHHHH
Q 013242 65 EA-------------------RADIQEVHFLPFDPTGKRTALTYIDS-EGKMHRVTKGSPEQILNLLHNKSKIGRKVNAV 124 (447)
Q Consensus 65 ~~-------------------~~~~~~~~~~pF~~~~kr~~v~~~~~-~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~ 124 (447)
+. ...+++++.+||+|.+|||+++++.. +++++.++|||||.|+++|.. +..++.+++.
T Consensus 528 ~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~-~~~p~~~~~~ 606 (1054)
T TIGR01657 528 EEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSP-ETVPSDYQEV 606 (1054)
T ss_pred ECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCC-cCCChhHHHH
Confidence 00 24688899999999999999999864 356789999999999999974 3457788999
Q ss_pred HHHHHHhhhhhhhhhhcccCCC--------CcCCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHH
Q 013242 125 INKFAERGLRSLAVAYQEVPEG--------SKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIA 196 (447)
Q Consensus 125 ~~~~~~~G~r~l~vA~~~~~~~--------~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a 196 (447)
+++|+++|+|||++||+++++. ++++.|++|+|+|+++|+||+||+++++|+.|+++||+|+|+|||++.||
T Consensus 607 ~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA 686 (1054)
T TIGR01657 607 LKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTA 686 (1054)
T ss_pred HHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHH
Confidence 9999999999999999998742 23567899999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCc---------------------------------------------------ccccCCcchhh--
Q 013242 197 KETGRRLGMGTNMYPS---------------------------------------------------SALSGQDRDES-- 223 (447)
Q Consensus 197 ~~ia~~lGi~~~~~~~---------------------------------------------------~~~~~~~~~~~-- 223 (447)
.++|+++||.++.... .++.|......
T Consensus 687 ~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~ 766 (1054)
T TIGR01657 687 VHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQA 766 (1054)
T ss_pred HHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHH
Confidence 9999999996432100 01112111110
Q ss_pred hhcCChhHHHhhccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCCh
Q 013242 224 IVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGL 303 (447)
Q Consensus 224 ~~~~~~~~~~~~~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~ 303 (447)
.....+.+++.++.+|||++|+||.++|+.+|+.|+.|+|+|||+||+||||+|||||||+++ + |..|||+++.++++
T Consensus 767 ~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-d-as~AA~f~l~~~~~ 844 (1054)
T TIGR01657 767 HSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-E-ASVAAPFTSKLASI 844 (1054)
T ss_pred hhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-c-ceeecccccCCCcH
Confidence 111234567788899999999999999999999999999999999999999999999999875 3 44899999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHhhcccccHHHHHHH
Q 013242 304 NVIITAVLISRAIFQRMRNYMVRGI-DGLSSTEFIQVLELNFLFTLDTVIAI 354 (447)
Q Consensus 304 ~~i~~~i~~~r~~~~~i~~~~~~~~-~~~~~~~~l~~~~~~~~~pl~~~~~l 354 (447)
++|..+|++||+++.++++.+.|.+ .++...+.+.+ +.....|+..+|++
T Consensus 845 ~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~l~~~Q~l 895 (1054)
T TIGR01657 845 SCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSI-LYLIGSNLGDGQFL 895 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHccCcCccHHHH
Confidence 9999999999999999999998887 44443333222 22334688888876
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-57 Score=500.86 Aligned_cols=343 Identities=29% Similarity=0.458 Sum_probs=280.2
Q ss_pred CcEEEecchhhcccCceEEEeeEeecc-c---C--CC-------------------ChHHHHHHHHHhcCCC--------
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIF-A---G--GV-------------------DADTVVLMAARASQVE-------- 47 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~-~---~--~~-------------------~~~~~l~~a~~~~~~~-------- 47 (447)
+|+||||||||||+|+|+|.+++.... . . +. ...+++..++.|+...
T Consensus 324 v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~ 403 (884)
T TIGR01522 324 VNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEADTL 403 (884)
T ss_pred ccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCCCeecCCCCCc
Confidence 689999999999999999998753210 0 0 00 1134555666554331
Q ss_pred CCChHHHHHHHhhCCc--hhhhccceEEEEEecCCCCceEEEEEEe-cCCeEEEEEcCcHHHHHhhccC-----------
Q 013242 48 NLDVIDAAIVGMLADP--KEARADIQEVHFLPFDPTGKRTALTYID-SEGKMHRVTKGSPEQILNLLHN----------- 113 (447)
Q Consensus 48 ~~~pi~~ai~~~~~~~--~~~~~~~~~~~~~pF~~~~kr~~v~~~~-~~g~~~~~~KGa~e~i~~~~~~----------- 113 (447)
..||+|.|++.++... ...+..++.++.+||+|.+|||++++++ .+++++.++||+||.|+..|..
T Consensus 404 ~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l 483 (884)
T TIGR01522 404 LGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTL 483 (884)
T ss_pred CCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeC
Confidence 1369999999886532 2234568899999999999999998876 3577899999999999999962
Q ss_pred ChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcH
Q 013242 114 KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQL 193 (447)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~ 193 (447)
+++.++.+.+.+++++++|+|++++||+++ +++|+|+|+++++|||||+++++|+.|+++||+++|+|||+.
T Consensus 484 ~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~ 555 (884)
T TIGR01522 484 TQQQRDVIQEEAAEMASAGLRVIAFASGPE--------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQ 555 (884)
T ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEEEEcC--------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCH
Confidence 123456678888999999999999999874 467999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhH
Q 013242 194 AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPA 273 (447)
Q Consensus 194 ~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~a 273 (447)
.+|.++|+++||.... ...+.|.+.+ .+...++.+++.+..+|||++|+||..+|+.+|++|+.|+|+|||.||+||
T Consensus 556 ~tA~~ia~~~Gi~~~~--~~~v~g~~l~-~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pA 632 (884)
T TIGR01522 556 ETAVSIARRLGMPSKT--SQSVSGEKLD-AMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPA 632 (884)
T ss_pred HHHHHHHHHcCCCCCC--CceeEhHHhH-hCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHH
Confidence 9999999999997532 2334444433 233344667788889999999999999999999999999999999999999
Q ss_pred HhhcCeeEEec-CchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHh-hcccccHHH
Q 013242 274 LKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI-DGLSSTEFIQVLE-LNFLFTLDT 350 (447)
Q Consensus 274 l~~A~vGIa~~-~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~i~~~~~~~~-~~~~~~~~l~~~~-~~~~~pl~~ 350 (447)
++.|||||||| ++++.++++||+++++++++.|..++++||++|+|+++++.|.+ .++....+..++. +....|+.+
T Consensus 633 l~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~ 712 (884)
T TIGR01522 633 LKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNA 712 (884)
T ss_pred HHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhH
Confidence 99999999998 69999999999999999999999999999999999999999999 5544444433333 345679999
Q ss_pred HHHH
Q 013242 351 VIAI 354 (447)
Q Consensus 351 ~~~l 354 (447)
+++|
T Consensus 713 ~qiL 716 (884)
T TIGR01522 713 MQIL 716 (884)
T ss_pred HHHH
Confidence 9998
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-56 Score=500.99 Aligned_cols=331 Identities=21% Similarity=0.317 Sum_probs=262.0
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCC--C-------------------------------C---------------
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGG--V-------------------------------D--------------- 32 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~--~-------------------------------~--------------- 32 (447)
|++||+|||||||+|+|++.+++++....+ . +
T Consensus 359 v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (1057)
T TIGR01652 359 VEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAK 438 (1057)
T ss_pred eeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhH
Confidence 689999999999999999999875311000 0 0
Q ss_pred -hHHHHHHHHHhcCC-------C-------CCChHHHHHHHhhCCch------------------hhhccceEEEEEecC
Q 013242 33 -ADTVVLMAARASQV-------E-------NLDVIDAAIVGMLADPK------------------EARADIQEVHFLPFD 79 (447)
Q Consensus 33 -~~~~l~~a~~~~~~-------~-------~~~pi~~ai~~~~~~~~------------------~~~~~~~~~~~~pF~ 79 (447)
..+.+..++.|+.. . ..+|.|.|++.++...+ .....|++++.+||+
T Consensus 439 ~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~ 518 (1057)
T TIGR01652 439 RINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFN 518 (1057)
T ss_pred HHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccC
Confidence 02344444444321 1 24799999998753221 122468899999999
Q ss_pred CCCceEEEEEEecCCeEEEEEcCcHHHHHhhccC-ChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCc----------
Q 013242 80 PTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN-KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK---------- 148 (447)
Q Consensus 80 ~~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~-~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~---------- 148 (447)
|.+|||++++++.+|++++++||||+.|+++|.. +++..+.+.+.+++|+++|+|||++|++.+++++.
T Consensus 519 s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a 598 (1057)
T TIGR01652 519 SDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEA 598 (1057)
T ss_pred CCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHH
Confidence 9999999999988888899999999999999974 34566788999999999999999999999875421
Q ss_pred ---------------CCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcc
Q 013242 149 ---------------ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSS 213 (447)
Q Consensus 149 ---------------~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~ 213 (447)
+..|++|+|+|+++++||||++++++|+.|+++||+|||+|||+.+||.++|+++|+.++.....
T Consensus 599 ~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~ 678 (1057)
T TIGR01652 599 STALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQI 678 (1057)
T ss_pred HhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEE
Confidence 34689999999999999999999999999999999999999999999999999999975432111
Q ss_pred ---------------------------------------cccCCcchhhhhc---CChhHHHhhcc--chhccChhhHHH
Q 013242 214 ---------------------------------------ALSGQDRDESIVA---LPVDELIEKAD--GFAGVFPEHKYE 249 (447)
Q Consensus 214 ---------------------------------------~~~~~~~~~~~~~---~~~~~~~~~~~--v~a~~~p~~K~~ 249 (447)
++.|...+..... ..+.+++..+. +|||++|+||++
T Consensus 679 ~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~ 758 (1057)
T TIGR01652 679 VITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKAD 758 (1057)
T ss_pred EEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHH
Confidence 2233322211111 11233455555 899999999999
Q ss_pred HHHHHhhc-CCEEEEEcCCCCchhHHhhcCeeEEecC-chHHHHhhcchhccCCChhHHHHHH-HHHHHHHHHHHHHHHH
Q 013242 250 IVKHLQAR-NHICGMIGNGVNDAPALKKADIGIAVAD-ATDAARSAADIVLTEPGLNVIITAV-LISRAIFQRMRNYMVR 326 (447)
Q Consensus 250 iV~~lq~~-g~~v~~iGDg~ND~~al~~A~vGIa~~~-a~~~a~~aAD~vl~~~~~~~i~~~i-~~~r~~~~~i~~~~~~ 326 (447)
+|+.+|+. |+.|+|+|||+||+|||++|||||++.+ ...+|+.+||+++.+ |+.+..++ .+||++|+|+++++.|
T Consensus 759 IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~ 836 (1057)
T TIGR01652 759 VVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILY 836 (1057)
T ss_pred HHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHH
Confidence 99999998 9999999999999999999999999853 334688999999975 99999998 6699999999999999
Q ss_pred HH-hHHHH
Q 013242 327 GI-DGLSS 333 (447)
Q Consensus 327 ~~-~~~~~ 333 (447)
.+ .++..
T Consensus 837 ~~~kn~~~ 844 (1057)
T TIGR01652 837 FFYKNLIF 844 (1057)
T ss_pred HHHHHHHH
Confidence 99 44433
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-54 Score=460.48 Aligned_cols=275 Identities=24% Similarity=0.373 Sum_probs=235.4
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCchhhhccceEEEEEecCC
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDP 80 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~~~~~pF~~ 80 (447)
+|+||||||||||+|++.+.+.. . ..+.+.++++..++.++..++ ||++.|++.++...+.. ......+++||++
T Consensus 298 v~vI~~DKTGTLT~Gn~~~~~~~-~--~~~~~~~~ll~~a~~~~~~s~-~P~~~AIv~~a~~~~~~-~~~~~~~~~pF~~ 372 (673)
T PRK14010 298 VNVLILDKTGTITYGNRMADAFI-P--VKSSSFERLVKAAYESSIADD-TPEGRSIVKLAYKQHID-LPQEVGEYIPFTA 372 (673)
T ss_pred CCEEEEeCCCcCCCCCeEEEEEE-e--CCCccHHHHHHHHHHhcCCCC-ChHHHHHHHHHHHcCCC-chhhhcceecccc
Confidence 68999999999999888776632 1 235566778888888776555 59999999876432110 0112245689999
Q ss_pred CCceEEEEEEecCCeEEEEEcCcHHHHHhhccCC-hhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEEEE
Q 013242 81 TGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNK-SKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIG 159 (447)
Q Consensus 81 ~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~-~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~lG 159 (447)
.+|+|++.+ +|+ .+.||+++.+++.|... ...+..+++..++++++|+|+++++.+ ++++|
T Consensus 373 ~~k~~gv~~---~g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~v~~~-------------~~~lG 434 (673)
T PRK14010 373 ETRMSGVKF---TTR--EVYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVLED-------------NEILG 434 (673)
T ss_pred ccceeEEEE---CCE--EEEECCHHHHHHHhhhcCCCCchHHHHHHHHHHhCCCeEEEEEEC-------------CEEEE
Confidence 999999864 243 56699999999998632 223344667778899999999988643 49999
Q ss_pred eccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccch
Q 013242 160 LIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 239 (447)
Q Consensus 160 ~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 239 (447)
++++.||+|||++++|++||++||+++|+|||++.+|.++|+++|++ ++|
T Consensus 435 ~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~------------------------------~v~ 484 (673)
T PRK14010 435 VIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD------------------------------RFV 484 (673)
T ss_pred EEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc------------------------------eEE
Confidence 99999999999999999999999999999999999999999999996 479
Q ss_pred hccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHH
Q 013242 240 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQR 319 (447)
Q Consensus 240 a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~ 319 (447)
++++|+||.++|+.+|++|+.|+|+|||+||+|||++|||||||+++++.|+++||+|+++++|+.|.+++++||++|.|
T Consensus 485 A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n 564 (673)
T PRK14010 485 AECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNSGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMT 564 (673)
T ss_pred cCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeCCCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 013242 320 MRNYMVRGI 328 (447)
Q Consensus 320 i~~~~~~~~ 328 (447)
+++++.|.+
T Consensus 565 ~~~~~~f~~ 573 (673)
T PRK14010 565 RGSLTTFSI 573 (673)
T ss_pred HHHHHheee
Confidence 999999998
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-54 Score=483.99 Aligned_cols=326 Identities=21% Similarity=0.276 Sum_probs=259.6
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCC-----------------------------------------CC-h-----
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGG-----------------------------------------VD-A----- 33 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~-----------------------------------------~~-~----- 33 (447)
|++||+|||||||+|+|.+.++.+....+| .+ .
T Consensus 453 V~yIfSDKTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 532 (1178)
T PLN03190 453 IKYVFSDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHV 532 (1178)
T ss_pred ceEEEEcCCCccccceEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHH
Confidence 689999999999999999999876321000 00 0
Q ss_pred HHHHHHHHHhcCC-----C-------------CCChHHHHHHHhhCCch----------------hhhccceEEEEEecC
Q 013242 34 DTVVLMAARASQV-----E-------------NLDVIDAAIVGMLADPK----------------EARADIQEVHFLPFD 79 (447)
Q Consensus 34 ~~~l~~a~~~~~~-----~-------------~~~pi~~ai~~~~~~~~----------------~~~~~~~~~~~~pF~ 79 (447)
.+.+...+.|+.. + ..+|.|.|++.++...+ ..+..|++++.+||+
T Consensus 533 ~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~ 612 (1178)
T PLN03190 533 HDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFD 612 (1178)
T ss_pred HHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEeccc
Confidence 1234444444322 1 12689999998764322 245678999999999
Q ss_pred CCCceEEEEEEecCCeEEEEEcCcHHHHHhhccC--ChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCc---------
Q 013242 80 PTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN--KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK--------- 148 (447)
Q Consensus 80 ~~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~--~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~--------- 148 (447)
|.+|||++++++.+|++.+|+||||+.|+++|.. +.+..+++.+.+++|+++|+|||++|||.++++++
T Consensus 613 S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~ 692 (1178)
T PLN03190 613 SDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEA 692 (1178)
T ss_pred ccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHH
Confidence 9999999999988888999999999999999974 24567788999999999999999999999975422
Q ss_pred ----------------CCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCc
Q 013242 149 ----------------ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPS 212 (447)
Q Consensus 149 ----------------~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~ 212 (447)
+.+|++|+|+|+++++||||++++++|+.|+++||+|||+|||+..+|.+||+++||.++....
T Consensus 693 a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~ 772 (1178)
T PLN03190 693 ASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQ 772 (1178)
T ss_pred hhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCee
Confidence 3468999999999999999999999999999999999999999999999999999997543221
Q ss_pred ccc-----------------------------------------------cCCcchhhhh---cCChhHHHhhcc--chh
Q 013242 213 SAL-----------------------------------------------SGQDRDESIV---ALPVDELIEKAD--GFA 240 (447)
Q Consensus 213 ~~~-----------------------------------------------~~~~~~~~~~---~~~~~~~~~~~~--v~a 240 (447)
..+ .|........ ...+.++..++. +||
T Consensus 773 i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~c 852 (1178)
T PLN03190 773 IIINSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCC 852 (1178)
T ss_pred EEecCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEe
Confidence 111 1111111111 012334555555 699
Q ss_pred ccChhhHHHHHHHHhhc-CCEEEEEcCCCCchhHHhhcCeeEEec-CchHHHHhhcchhccCCChhHHHHHHHH-HHHHH
Q 013242 241 GVFPEHKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLI-SRAIF 317 (447)
Q Consensus 241 ~~~p~~K~~iV~~lq~~-g~~v~~iGDg~ND~~al~~A~vGIa~~-~a~~~a~~aAD~vl~~~~~~~i~~~i~~-~r~~~ 317 (447)
|++|.||+++|+.+|+. +++|+|||||+||++||++|||||++. ....+|..+||+++.+ |..+.+++.. ||+.|
T Consensus 853 R~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~--Fr~L~rLLlvHGr~~y 930 (1178)
T PLN03190 853 RVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQ--FRFLVPLLLVHGHWNY 930 (1178)
T ss_pred cCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchhh--hHHHHHHHHHhCHHHH
Confidence 99999999999999997 579999999999999999999999974 4556888899999966 9999999985 99999
Q ss_pred HHHHHHHHHHH
Q 013242 318 QRMRNYMVRGI 328 (447)
Q Consensus 318 ~~i~~~~~~~~ 328 (447)
+|+...+.|.|
T Consensus 931 ~R~s~~i~y~f 941 (1178)
T PLN03190 931 QRMGYMILYNF 941 (1178)
T ss_pred HHHHHHHHHHH
Confidence 99999999998
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-53 Score=451.20 Aligned_cols=276 Identities=26% Similarity=0.388 Sum_probs=238.7
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCc-h--hhhccceEEEEEe
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADP-K--EARADIQEVHFLP 77 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~-~--~~~~~~~~~~~~p 77 (447)
+|+||||||||||+|+|++.+.+. ..+.+.++++.+++.++..++| |+++|++.++... + .....++..+++|
T Consensus 298 v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~a~~~s~~s~h-P~~~AIv~~a~~~~~~~~~~~~~~~~~~~p 373 (679)
T PRK01122 298 VDTLLLDKTGTITLGNRQASEFLP---VPGVTEEELADAAQLSSLADET-PEGRSIVVLAKQRFNLRERDLQSLHATFVP 373 (679)
T ss_pred CCEEEEeCCCCCcCCcEEEEEEEe---CCCCCHHHHHHHHHHhcCCCCC-chHHHHHHHHHhhcCCCchhhccccceeEe
Confidence 689999999999999999987542 2467788888989888887665 9999999876531 1 1111245678899
Q ss_pred cCCCCceEEEEEEecCCeEEEEEcCcHHHHHhhccCC-hhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcE
Q 013242 78 FDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNK-SKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQ 156 (447)
Q Consensus 78 F~~~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~-~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~ 156 (447)
|++.++++++.+ +| ..+.||+++.+++.|... ...++.+++.+++++++|+|++++|++. +
T Consensus 374 F~s~~~~~gv~~---~g--~~~~kGa~e~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~va~~~-------------~ 435 (679)
T PRK01122 374 FSAQTRMSGVDL---DG--REIRKGAVDAIRRYVESNGGHFPAELDAAVDEVARKGGTPLVVAEDN-------------R 435 (679)
T ss_pred ecCcCceEEEEE---CC--EEEEECCHHHHHHHHHhcCCcChHHHHHHHHHHHhCCCcEEEEEECC-------------e
Confidence 999988887653 34 578999999999999532 3345678888899999999999999754 9
Q ss_pred EEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhc
Q 013242 157 FIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKA 236 (447)
Q Consensus 157 ~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (447)
++|+++++||+||+++++|++||++||+++|+|||++.+|..+|+++|++
T Consensus 436 ~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId------------------------------ 485 (679)
T PRK01122 436 VLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD------------------------------ 485 (679)
T ss_pred EEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc------------------------------
Confidence 99999999999999999999999999999999999999999999999996
Q ss_pred cchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHH
Q 013242 237 DGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAI 316 (447)
Q Consensus 237 ~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~ 316 (447)
++|++++|+||.++|+.+|++|+.|+|+|||+||+|||++|||||||+++++.|+++||+|++++||..|.+++++||++
T Consensus 486 ~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~ 565 (679)
T PRK01122 486 DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQL 565 (679)
T ss_pred EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHH
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 013242 317 FQRMRNYMVRGI 328 (447)
Q Consensus 317 ~~~i~~~~~~~~ 328 (447)
.-.--....|++
T Consensus 566 ~~tr~~~~~f~~ 577 (679)
T PRK01122 566 LMTRGALTTFSI 577 (679)
T ss_pred HhhhHhhhhhhH
Confidence 843334466666
|
|
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-53 Score=438.31 Aligned_cols=352 Identities=27% Similarity=0.423 Sum_probs=288.2
Q ss_pred cEEEecchhhcccCceEEEeeEeecccCCC----------------ChHHHHHHHHHhcCC---------------CCCC
Q 013242 2 DVLCCDKTGTLTLNKLTVDKNLIEIFAGGV----------------DADTVVLMAARASQV---------------ENLD 50 (447)
Q Consensus 2 ~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~----------------~~~~~l~~a~~~~~~---------------~~~~ 50 (447)
++||+|||||||+|.|+|...|.+...... .-..+++.+..|++. .+.|
T Consensus 367 s~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~ 446 (1019)
T KOG0203|consen 367 STICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGD 446 (1019)
T ss_pred eeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCC
Confidence 589999999999999999987743211111 112456666666542 3457
Q ss_pred hHHHHHHHhhC----CchhhhccceEEEEEecCCCCceEEEEEEec---CCeEEEEEcCcHHHHHhhcc----------C
Q 013242 51 VIDAAIVGMLA----DPKEARADIQEVHFLPFDPTGKRTALTYIDS---EGKMHRVTKGSPEQILNLLH----------N 113 (447)
Q Consensus 51 pi~~ai~~~~~----~~~~~~~~~~~~~~~pF~~~~kr~~v~~~~~---~g~~~~~~KGa~e~i~~~~~----------~ 113 (447)
+.+.|++++.. +..+.|..++.+..+||||++|..-.+.... +.+..+++|||||.++++|+ .
T Consensus 447 ~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pl 526 (1019)
T KOG0203|consen 447 ASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPL 526 (1019)
T ss_pred HHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCc
Confidence 89999998753 3356688888899999999999988877653 35788999999999999997 3
Q ss_pred ChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCc-----------CCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCC
Q 013242 114 KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK-----------ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLG 182 (447)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~-----------~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~G 182 (447)
++...+.+++...++...|.||+++|++.+++..+ ..+-.+|.|+|++++-||||..+++++..|+.+|
T Consensus 527 d~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAG 606 (1019)
T KOG0203|consen 527 DEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAG 606 (1019)
T ss_pred CHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccccchhhccCCCcccCchhhhhhhhhC
Confidence 45677889999999999999999999999986532 3456889999999999999999999999999999
Q ss_pred CeEEEEcCCcHHHHHHHHHHhCCCCCCC------------C----------cccccCCcchhhhhcCChhHHHhhcc--c
Q 013242 183 LGVKMITGDQLAIAKETGRRLGMGTNMY------------P----------SSALSGQDRDESIVALPVDELIEKAD--G 238 (447)
Q Consensus 183 i~v~miTGd~~~~a~~ia~~lGi~~~~~------------~----------~~~~~~~~~~~~~~~~~~~~~~~~~~--v 238 (447)
|+|+|+|||++.||+++|+++||..... + ..++.|.+.. .+....+++++.++. +
T Consensus 607 IkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~-~~~~~qld~il~nh~eIV 685 (1019)
T KOG0203|consen 607 IKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELP-DMSSEQLDELLQNHQEIV 685 (1019)
T ss_pred ceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEeccccc-ccCHHHHHHHHHhCCceE
Confidence 9999999999999999999999754211 0 1123333322 344455777777665 8
Q ss_pred hhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEec-CchHHHHhhcchhccCCChhHHHHHHHHHHHHH
Q 013242 239 FAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIF 317 (447)
Q Consensus 239 ~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~-~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~ 317 (447)
|||.+|+||..||+..|++|.+|+.+|||+||+||||+|||||||| .++|++|+|||++|++++|.+|+..+++||-+|
T Consensus 686 FARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiF 765 (1019)
T KOG0203|consen 686 FARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIF 765 (1019)
T ss_pred EEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcchhheeecccceehh
Confidence 9999999999999999999999999999999999999999999999 899999999999999999999999999999999
Q ss_pred HHHHHHHHHHH-hHHH-HHHHHHHHhhcccccHHHHHHH
Q 013242 318 QRMRNYMVRGI-DGLS-STEFIQVLELNFLFTLDTVIAI 354 (447)
Q Consensus 318 ~~i~~~~~~~~-~~~~-~~~~l~~~~~~~~~pl~~~~~l 354 (447)
+|+||.+.|.+ .++- +..||++.++...+|+..+.+|
T Consensus 766 DNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL 804 (1019)
T KOG0203|consen 766 DNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTIL 804 (1019)
T ss_pred hhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhh
Confidence 99999999999 4433 3445555555667899999998
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-50 Score=427.85 Aligned_cols=277 Identities=26% Similarity=0.356 Sum_probs=241.5
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCchhh--hccceEEEEEec
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEA--RADIQEVHFLPF 78 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~~~~--~~~~~~~~~~pF 78 (447)
+|+||||||||||+|+|++.+.+. ..+.+.++++.+++.++..++| |+++|++.++...+.. ...++..++.||
T Consensus 299 v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~aa~~~~~s~h-P~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf 374 (675)
T TIGR01497 299 VDTLLLDKTGTITLGNRLASEFIP---AQGVDEKTLADAAQLASLADDT-PEGKSIVILAKQLGIREDDVQSLHATFVEF 374 (675)
T ss_pred CCEEEECCCCcccCCCeEEEEEEe---cCCCcHHHHHHHHHHhcCCCCC-cHHHHHHHHHHHcCCCccccccccceEEEE
Confidence 689999999999999999987542 2467788899999888877665 9999999876532111 112345678999
Q ss_pred CCCCceEEEEEEecCCeEEEEEcCcHHHHHhhccC-ChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEE
Q 013242 79 DPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN-KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQF 157 (447)
Q Consensus 79 ~~~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~-~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~ 157 (447)
++.++++.+.+. +| ..+.||+++.+++.|.. ....+..+++.+++++++|+|++++|++. ++
T Consensus 375 ~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~~~~a~~G~r~l~va~~~-------------~~ 437 (675)
T TIGR01497 375 TAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVCEDN-------------RI 437 (675)
T ss_pred cCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHHHHHHHHHHhCCCeEEEEEECC-------------EE
Confidence 999877766443 34 57899999999988853 22345667888899999999999999864 99
Q ss_pred EEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhcc
Q 013242 158 IGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 237 (447)
Q Consensus 158 lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (447)
+|++++.||+||+++++|++|+++||+++|+|||+..+|..+|+++|++ +
T Consensus 438 lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~------------------------------~ 487 (675)
T TIGR01497 438 YGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVD------------------------------D 487 (675)
T ss_pred EEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC------------------------------E
Confidence 9999999999999999999999999999999999999999999999996 4
Q ss_pred chhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHH
Q 013242 238 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIF 317 (447)
Q Consensus 238 v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~ 317 (447)
++++++|++|.++|+.+|++|+.|+|+|||.||+|||++||+||||+++++.++++||+|++++||+.|.+++++||+++
T Consensus 488 v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~ 567 (675)
T TIGR01497 488 FIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLL 567 (675)
T ss_pred EEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 013242 318 QRMRNYMVRGI 328 (447)
Q Consensus 318 ~~i~~~~~~~~ 328 (447)
-+......|++
T Consensus 568 ~t~~~~~t~~~ 578 (675)
T TIGR01497 568 ITRGALTTFSI 578 (675)
T ss_pred HHHHHHheeee
Confidence 88888888887
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-50 Score=425.11 Aligned_cols=306 Identities=30% Similarity=0.379 Sum_probs=248.2
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCchhhhccceEEEEEecCC
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDP 80 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~~~~~pF~~ 80 (447)
+|+++||||||||+|+|.|.+.. ... + ++++++.+|+..+..++| |++.||+.++.+.+ ....+..+.+|
T Consensus 405 v~tvvFDKTGTLT~G~p~v~~v~--~~~-~-~e~~~L~laAalE~~S~H-PiA~AIv~~a~~~~--~~~~~~~~~i~--- 474 (713)
T COG2217 405 VDTVVFDKTGTLTEGKPEVTDVV--ALD-G-DEDELLALAAALEQHSEH-PLAKAIVKAAAERG--LPDVEDFEEIP--- 474 (713)
T ss_pred CCEEEEeCCCCCcCCceEEEEEe--cCC-C-CHHHHHHHHHHHHhcCCC-hHHHHHHHHHHhcC--CCCccceeeec---
Confidence 68999999999999999998854 232 3 889999999999998877 99999999765432 11222233333
Q ss_pred CCceEEEEEEecCCeEEEEEcCcHHHHHhhccCChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEEEEe
Q 013242 81 TGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGL 160 (447)
Q Consensus 81 ~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~lG~ 160 (447)
.+ .+.. ..+| ..+..|++.++.+.- .+... .....+.+.++|..++.++.++ +++|+
T Consensus 475 --G~-Gv~~-~v~g--~~v~vG~~~~~~~~~---~~~~~-~~~~~~~~~~~G~t~v~va~dg-------------~~~g~ 531 (713)
T COG2217 475 --GR-GVEA-EVDG--ERVLVGNARLLGEEG---IDLPL-LSERIEALESEGKTVVFVAVDG-------------KLVGV 531 (713)
T ss_pred --cC-cEEE-EECC--EEEEEcCHHHHhhcC---CCccc-hhhhHHHHHhcCCeEEEEEECC-------------EEEEE
Confidence 11 1111 1245 567789999987532 11222 5666788889999999999987 99999
Q ss_pred ccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchh
Q 013242 161 IPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240 (447)
Q Consensus 161 i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 240 (447)
+++.|++||+++++|++||+.|++++|+|||+..+|..+|+++||+ ++++
T Consensus 532 i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId------------------------------~v~A 581 (713)
T COG2217 532 IALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGID------------------------------EVRA 581 (713)
T ss_pred EEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChH------------------------------hhec
Confidence 9999999999999999999999999999999999999999999996 5799
Q ss_pred ccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHH
Q 013242 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRM 320 (447)
Q Consensus 241 ~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~i 320 (447)
++.|++|.++|+.||++|+.|+|+|||+||+|+|..||||||||.++|.|+++||+|+++++++.+..+|..||+++++|
T Consensus 582 ellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~I 661 (713)
T COG2217 582 ELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRII 661 (713)
T ss_pred cCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhcccccHHHHHHHHHhcccCCcccchhHHHHHH
Q 013242 321 RNYMVRGIDGLSSTEFIQVLELNFLFTLDTVIAILQTAFTSKKDFGKEERELLW 374 (447)
Q Consensus 321 ~~~~~~~~~~~~~~~~l~~~~~~~~~pl~~~~~l~~~~~~~~~~~~~~~~~~~w 374 (447)
|+|+.|++.++...+.+.++. ++ .|+.-...+.+++..+..++.|...|
T Consensus 662 kqNl~~A~~yn~~~iplA~~g---~l--~p~~A~~am~~SSv~VvlNaLRL~~~ 710 (713)
T COG2217 662 KQNLFWAFGYNAIAIPLAAGG---LL--TPWIAALAMSGSSVLVVLNALRLLRS 710 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHh---hc--CHHHHHHHHcccHHHHHHHHHHhhcc
Confidence 999999994444443333332 11 12222367788888888777776654
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-49 Score=434.19 Aligned_cols=326 Identities=22% Similarity=0.281 Sum_probs=260.1
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCC--------------------------------------------hHHH
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVD--------------------------------------------ADTV 36 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~--------------------------------------------~~~~ 36 (447)
|++|++|||||||+|.|.+.+|.|....+|.. ..+.
T Consensus 387 v~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f 466 (1151)
T KOG0206|consen 387 VEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEF 466 (1151)
T ss_pred eeEEEEcCcCccccceeeeecccccCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHH
Confidence 67999999999999999999988753322211 0123
Q ss_pred HHHHHHhcCC-------------CCCChHHHHHHHhhCCch----------------hhhccceEEEEEecCCCCceEEE
Q 013242 37 VLMAARASQV-------------ENLDVIDAAIVGMLADPK----------------EARADIQEVHFLPFDPTGKRTAL 87 (447)
Q Consensus 37 l~~a~~~~~~-------------~~~~pi~~ai~~~~~~~~----------------~~~~~~~~~~~~pF~~~~kr~~v 87 (447)
+...+.|... ....|.+.|++..+.+.+ .....|++++.++|+|.||||+|
T Consensus 467 ~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSV 546 (1151)
T KOG0206|consen 467 FRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSV 546 (1151)
T ss_pred hhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEE
Confidence 3344444311 112477888887654211 12457999999999999999999
Q ss_pred EEEecCCeEEEEEcCcHHHHHhhcc-CChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCc------------------
Q 013242 88 TYIDSEGKMHRVTKGSPEQILNLLH-NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK------------------ 148 (447)
Q Consensus 88 ~~~~~~g~~~~~~KGa~e~i~~~~~-~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~------------------ 148 (447)
++++++|+..+|||||+..|.+++. ......++..+++++|+.+|+|+||+||+.++++++
T Consensus 547 IVR~p~g~i~LycKGADsvI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re 626 (1151)
T KOG0206|consen 547 IVRDPDGRILLYCKGADSVIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDRE 626 (1151)
T ss_pred EEEcCCCcEEEEEcCcchhhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHH
Confidence 9999999999999999999999998 556778888999999999999999999999987753
Q ss_pred -------CCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCc--
Q 013242 149 -------ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQD-- 219 (447)
Q Consensus 149 -------~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~-- 219 (447)
+.+|++|+++|..++||+++++++++|+.|+++|||+||+|||..+||.+|+..|++..+......+....
T Consensus 627 ~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~ 706 (1151)
T KOG0206|consen 627 ELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSE 706 (1151)
T ss_pred HHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChh
Confidence 35689999999999999999999999999999999999999999999999999999976544322222111
Q ss_pred -------------------------------------------chhhhhcC---ChhHHHh--hccchhccChhhHHHHH
Q 013242 220 -------------------------------------------RDESIVAL---PVDELIE--KADGFAGVFPEHKYEIV 251 (447)
Q Consensus 220 -------------------------------------------~~~~~~~~---~~~~~~~--~~~v~a~~~p~~K~~iV 251 (447)
....+... .+.++.. ++.++||++|.||+.+|
T Consensus 707 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv 786 (1151)
T KOG0206|consen 707 ELSSLDATAALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVV 786 (1151)
T ss_pred hhcchhhHHHHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHH
Confidence 10000000 1112222 34579999999999999
Q ss_pred HHHhh-cCCEEEEEcCCCCchhHHhhcCeeEEec-CchHHHHhhcchhccCCChhHHHHHHHH-HHHHHHHHHHHHHHHH
Q 013242 252 KHLQA-RNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLI-SRAIFQRMRNYMVRGI 328 (447)
Q Consensus 252 ~~lq~-~g~~v~~iGDg~ND~~al~~A~vGIa~~-~a~~~a~~aAD~vl~~~~~~~i~~~i~~-~r~~~~~i~~~~~~~~ 328 (447)
+..++ .+..+++||||+||++|++.|||||+++ ....+|..+||+.+.. |.-+..++.. ||+.|.|+.+++.|++
T Consensus 787 ~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaq--FrfL~rLLLVHGhW~Y~R~a~~ilyfF 864 (1151)
T KOG0206|consen 787 KLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQ--FRFLERLLLVHGHWSYIRLAKMILYFF 864 (1151)
T ss_pred HHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHH--HHHHhhhheeecceeHHHHHHHHHHHH
Confidence 99975 4889999999999999999999999996 5778888999999977 8888777765 9999999999999999
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-48 Score=403.50 Aligned_cols=324 Identities=26% Similarity=0.291 Sum_probs=261.8
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCchhhhccceEEEEEecCC
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDP 80 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~~~~~pF~~ 80 (447)
|++++||||||||+|++.|.+.. ......+..+++.+++..+..+.| |+.+||+.|+.+..........+.+--|..
T Consensus 582 v~tVvFDKTGTLT~G~~~V~~~~--~~~~~~~~~e~l~~v~a~Es~SeH-Pig~AIv~yak~~~~~~~~~~~~~~~~~pg 658 (951)
T KOG0207|consen 582 VKTVVFDKTGTLTEGKPTVVDFK--SLSNPISLKEALALVAAMESGSEH-PIGKAIVDYAKEKLVEPNPEGVLSFEYFPG 658 (951)
T ss_pred CCEEEEcCCCceecceEEEEEEE--ecCCcccHHHHHHHHHHHhcCCcC-chHHHHHHHHHhcccccCccccceeecccC
Confidence 68999999999999999999854 344447888999888888877766 999999999875442211112222222332
Q ss_pred CCceEEEEEEecCCeEEEEEcCcHHHHHhhccCChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEEEEe
Q 013242 81 TGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGL 160 (447)
Q Consensus 81 ~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~lG~ 160 (447)
..+...+. .+|+. ++.|+.+++...- ....+.++...++-...|..+.++++++ +++|+
T Consensus 659 ~g~~~~~~---~~~~~--i~iGN~~~~~r~~---~~~~~~i~~~~~~~e~~g~tvv~v~vn~-------------~l~gv 717 (951)
T KOG0207|consen 659 EGIYVTVT---VDGNE--VLIGNKEWMSRNG---CSIPDDILDALTESERKGQTVVYVAVNG-------------QLVGV 717 (951)
T ss_pred CCcccceE---EeeeE--EeechHHHHHhcC---CCCchhHHHhhhhHhhcCceEEEEEECC-------------EEEEE
Confidence 22221111 23333 7889999987632 3345567788888889999999999998 99999
Q ss_pred ccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchh
Q 013242 161 IPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240 (447)
Q Consensus 161 i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 240 (447)
+.++|++|||+..+|..||+.||+++|+||||..+|..+|+++|++ .+|+
T Consensus 718 ~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~------------------------------~V~a 767 (951)
T KOG0207|consen 718 FALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID------------------------------NVYA 767 (951)
T ss_pred EEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc------------------------------eEEe
Confidence 9999999999999999999999999999999999999999999986 5899
Q ss_pred ccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHH
Q 013242 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRM 320 (447)
Q Consensus 241 ~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~i 320 (447)
++.|+||.++|+.+|++++.|+|+|||+||+|+|.+|||||+|+.+++.|.++||+|++.|++..++.+|..||+++.|+
T Consensus 768 ev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rI 847 (951)
T KOG0207|consen 768 EVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRI 847 (951)
T ss_pred ccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhccc-ccHHHHHHHHHhcccCCcccchhHHHHHHHHHH
Q 013242 321 RNYMVRGIDGLSSTEFIQVLELNFL-FTLDTVIAILQTAFTSKKDFGKEERELLWAHAQ 378 (447)
Q Consensus 321 ~~~~~~~~~~~~~~~~l~~~~~~~~-~pl~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~ 378 (447)
|.|+.|++.+++..+.+.++.++++ +-|.|..--..+++++.+++-.+.....|..+.
T Consensus 848 k~N~~~A~~yn~~~IpIAagvF~P~~~~L~Pw~A~lama~SSvsVv~sSllLk~~k~p~ 906 (951)
T KOG0207|consen 848 KLNFVWALIYNLVGIPIAAGVFAPFGIVLPPWMASLAMAASSVSVVLSSLLLKRYKKPT 906 (951)
T ss_pred HHHHHHHHHHHHhhhhhheecccCCccccCchHHHHHHHhhhHHHhhhHHHHhhccccc
Confidence 9999999944444444555554433 223333333888999999987777777776665
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-47 Score=402.32 Aligned_cols=256 Identities=25% Similarity=0.356 Sum_probs=214.1
Q ss_pred cceEEEEEecCCCCceEEEEEEe-cCCeEEEEEcCcHHHHHhhccCChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCC-
Q 013242 69 DIQEVHFLPFDPTGKRTALTYID-SEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEG- 146 (447)
Q Consensus 69 ~~~~~~~~pF~~~~kr~~v~~~~-~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~- 146 (447)
.+.+++.+||+|.-+||+|++.+ .+.+...|+|||||.|.+.|. .+.++..+++.++.|+.+|+|++++|+|.++..
T Consensus 600 ~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~-p~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~ 678 (1140)
T KOG0208|consen 600 EISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICK-PETVPADYQEVLKEYTHQGFRVIALASKELETST 678 (1140)
T ss_pred ceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcC-cccCCccHHHHHHHHHhCCeEEEEEecCccCcch
Confidence 47789999999999999999997 456789999999999999996 456788999999999999999999999999865
Q ss_pred -------CcCCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCc-------
Q 013242 147 -------SKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPS------- 212 (447)
Q Consensus 147 -------~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~------- 212 (447)
+++..|++++|+|++.|++++|+.++.+|++|.+++|+++|+||||..||..+|+.|||..+....
T Consensus 679 ~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~ 758 (1140)
T KOG0208|consen 679 LQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEP 758 (1140)
T ss_pred HHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccC
Confidence 467899999999999999999999999999999999999999999999999999999997521100
Q ss_pred --------ccc--------------------------------------cCCcchhhh--hcCChhHHHhhccchhccCh
Q 013242 213 --------SAL--------------------------------------SGQDRDESI--VALPVDELIEKADGFAGVFP 244 (447)
Q Consensus 213 --------~~~--------------------------------------~~~~~~~~~--~~~~~~~~~~~~~v~a~~~p 244 (447)
..+ .|+...-.. ...-++.++.++.+||||+|
T Consensus 759 ~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP 838 (1140)
T KOG0208|consen 759 PEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSP 838 (1140)
T ss_pred CccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCc
Confidence 000 000000000 00113356678889999999
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHH
Q 013242 245 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYM 324 (447)
Q Consensus 245 ~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~i~~~~ 324 (447)
.||.++|+.+|+.|+.|+|+|||+||+.|||+||+||+.+++. |.-||.+.-.-++.+.+...|++||+.+-.--..+
T Consensus 839 ~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSeaE--ASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~F 916 (1140)
T KOG0208|consen 839 DQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSEAE--ASVAAPFTSKTPSISCVPDVIREGRAALVTSFACF 916 (1140)
T ss_pred hhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhhhh--HhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHH
Confidence 9999999999999999999999999999999999999998654 56789999888899999999999999765544444
Q ss_pred HHH
Q 013242 325 VRG 327 (447)
Q Consensus 325 ~~~ 327 (447)
.|.
T Consensus 917 kYM 919 (1140)
T KOG0208|consen 917 KYM 919 (1140)
T ss_pred HHH
Confidence 443
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-48 Score=392.35 Aligned_cols=280 Identities=21% Similarity=0.265 Sum_probs=226.9
Q ss_pred hccceEEEEEecCCCCceEEEEEEec-CCeEEEEEcCcHHHHHhhccCChhhHHHHHHHHHHHHHhhhhhhhhhhcccCC
Q 013242 67 RADIQEVHFLPFDPTGKRTALTYIDS-EGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPE 145 (447)
Q Consensus 67 ~~~~~~~~~~pF~~~~kr~~v~~~~~-~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~ 145 (447)
..+|+++..+||+|+.|||.+++++. +|+...|.|||+..|..... ..+++++...+||++|+|+|.+|.+.+++
T Consensus 536 ~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq----~NdWleEE~gNMAREGLRtLVvakK~Ls~ 611 (1051)
T KOG0210|consen 536 ELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQ----YNDWLEEECGNMAREGLRTLVVAKKVLSE 611 (1051)
T ss_pred ceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcccc----cchhhhhhhhhhhhhcceEEEEEecccCH
Confidence 34799999999999999999999985 78999999999999887654 34578888999999999999999999987
Q ss_pred CCcC--------------------------CCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHH
Q 013242 146 GSKE--------------------------SSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKET 199 (447)
Q Consensus 146 ~~~~--------------------------~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~i 199 (447)
++++ ..|.+++++|+.+.||++++|++.+++.|+++||+|||+|||..+||..+
T Consensus 612 ~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ci 691 (1051)
T KOG0210|consen 612 EEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICI 691 (1051)
T ss_pred HHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeee
Confidence 6421 34899999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCC--------------------------CCcccccCCcchhhhhc--CChhHHHh--hccchhccChhhHHH
Q 013242 200 GRRLGMGTNM--------------------------YPSSALSGQDRDESIVA--LPVDELIE--KADGFAGVFPEHKYE 249 (447)
Q Consensus 200 a~~lGi~~~~--------------------------~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~v~a~~~p~~K~~ 249 (447)
|+..++.+-. ....++.|++.+-.+.. .++-++.. .+.++|||+|.||++
T Consensus 692 AkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~ 771 (1051)
T KOG0210|consen 692 AKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQ 771 (1051)
T ss_pred ehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHH
Confidence 9999987521 12233444443322211 12223332 234799999999999
Q ss_pred HHHHHhhc-CCEEEEEcCCCCchhHHhhcCeeEEe-cCchHHHHhhcchhccCCChhHHHHHHHH-HHHHHHHHHHHHHH
Q 013242 250 IVKHLQAR-NHICGMIGNGVNDAPALKKADIGIAV-ADATDAARSAADIVLTEPGLNVIITAVLI-SRAIFQRMRNYMVR 326 (447)
Q Consensus 250 iV~~lq~~-g~~v~~iGDg~ND~~al~~A~vGIa~-~~a~~~a~~aAD~vl~~~~~~~i~~~i~~-~r~~~~~i~~~~~~ 326 (447)
+++.+|++ |..|++||||-||++|++.||+||++ |+...+|.-|||+.+++ |+.+.+++.+ ||..|+|-.+...|
T Consensus 772 v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItq--F~Hv~rLLl~HGR~SYkrsa~laqf 849 (1051)
T KOG0210|consen 772 VVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQ--FSHVSRLLLWHGRNSYKRSAKLAQF 849 (1051)
T ss_pred HHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccHHH--HHHHHHHhhccccchHHHHHHHHHH
Confidence 99999986 88999999999999999999999998 57888899999999977 9999999998 99999999999999
Q ss_pred HH-hHHHHHHHHHHHh-hcccccHHHHH
Q 013242 327 GI-DGLSSTEFIQVLE-LNFLFTLDTVI 352 (447)
Q Consensus 327 ~~-~~~~~~~~l~~~~-~~~~~pl~~~~ 352 (447)
.+ .|+.+.+...++- ++.|.|+.+.+
T Consensus 850 ViHRGL~Is~~Qavfs~v~yF~~V~Lyq 877 (1051)
T KOG0210|consen 850 VIHRGLIISTMQAVFSSVFYFAPVALYQ 877 (1051)
T ss_pred HHhhhHHHHHHHHHHHHHhhhcchHHhh
Confidence 98 5554444433322 23344444443
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-44 Score=389.52 Aligned_cols=299 Identities=27% Similarity=0.304 Sum_probs=236.3
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCchhhhccceEEEEEecCC
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDP 80 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~~~~~pF~~ 80 (447)
||++|||||||||+|+|+|.+.. . ..+.++++++.+++..+..++ ||+++|++.++.+. ++ .+||.+
T Consensus 436 v~~v~fDKTGTLT~g~~~v~~~~--~-~~~~~~~~~l~~aa~~e~~s~-hPia~Ai~~~a~~~-----~~----~~~~~~ 502 (741)
T PRK11033 436 VTTVAFDKTGTLTEGKPQVTDIH--P-ATGISESELLALAAAVEQGST-HPLAQAIVREAQVR-----GL----AIPEAE 502 (741)
T ss_pred CCEEEEeCCCCCcCCceEEEEEE--e-cCCCCHHHHHHHHHHHhcCCC-CHHHHHHHHHHHhc-----CC----CCCCCc
Confidence 68999999999999999998853 2 235678889999888776655 59999999876432 11 146665
Q ss_pred CCceEEEE-EE-ecCCeEEEEEcCcHHHHHhhccCChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEEE
Q 013242 81 TGKRTALT-YI-DSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFI 158 (447)
Q Consensus 81 ~~kr~~v~-~~-~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~l 158 (447)
..+.+.-. ++ ..+|.. +..|+++.+.+ ..+.+...++++..+|+++++|+++. +++
T Consensus 503 ~~~~~~g~Gv~~~~~g~~--~~ig~~~~~~~-------~~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~ 560 (741)
T PRK11033 503 SQRALAGSGIEGQVNGER--VLICAPGKLPP-------LADAFAGQINELESAGKTVVLVLRND-------------DVL 560 (741)
T ss_pred ceEEEeeEEEEEEECCEE--EEEecchhhhh-------ccHHHHHHHHHHHhCCCEEEEEEECC-------------EEE
Confidence 55554321 21 134543 45689998765 12345556778899999999999875 999
Q ss_pred EeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccc
Q 013242 159 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADG 238 (447)
Q Consensus 159 G~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 238 (447)
|+++|+|++||+++++|++|++.|++++|+|||+..++..+++++||. .
T Consensus 561 g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~-------------------------------~ 609 (741)
T PRK11033 561 GLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID-------------------------------F 609 (741)
T ss_pred EEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-------------------------------e
Confidence 999999999999999999999999999999999999999999999994 3
Q ss_pred hhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHH
Q 013242 239 FAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQ 318 (447)
Q Consensus 239 ~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~ 318 (447)
++++.|++|..+|+.+|+. +.|+|+|||.||+|||+.|||||+|+++++.++++||+++..+++..|..++.+||++++
T Consensus 610 ~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~ 688 (741)
T PRK11033 610 RAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRATHA 688 (741)
T ss_pred ecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHH
Confidence 5778999999999999965 589999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH-hHHHHHHHHHHHhhcccccHHHHHHHHHhcccCCcccchhHHHH
Q 013242 319 RMRNYMVRGI-DGLSSTEFIQVLELNFLFTLDTVIAILQTAFTSKKDFGKEEREL 372 (447)
Q Consensus 319 ~i~~~~~~~~-~~~~~~~~l~~~~~~~~~pl~~~~~l~~~~~~~~~~~~~~~~~~ 372 (447)
||++|+.|++ ++...+.+..+++ +|+.. -.+.+..++..+..++.|..
T Consensus 689 ~I~~nl~~a~~~n~~~i~~a~~g~----~~~~~--a~~~~~~ss~~v~~Nslrl~ 737 (741)
T PRK11033 689 NIRQNITIALGLKAIFLVTTLLGI----TGLWL--AVLADSGATALVTANALRLL 737 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh----hHHHH--HHHHHcChHHHHHHHHHhhc
Confidence 9999999999 5544443333222 22111 12444455555555555544
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-43 Score=370.21 Aligned_cols=251 Identities=36% Similarity=0.547 Sum_probs=217.7
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCchhhhccceEEEEEecCC
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDP 80 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~~~~~pF~~ 80 (447)
||++|||||||||+|+|+|.++++. . + +. ...||++.|++.++... .++..||++
T Consensus 230 v~~i~fDKTGTLT~~~~~v~~~~~~--~-~-------------~~-~s~hp~~~ai~~~~~~~--------~~~~~~f~~ 284 (499)
T TIGR01494 230 VDYICSDKTGTLTKNEMSFKKVSVL--G-G-------------EY-LSGHPDERALVKSAKWK--------ILNVFEFSS 284 (499)
T ss_pred CcEEEeeCCCccccCceEEEEEEec--C-C-------------Cc-CCCChHHHHHHHHhhhc--------CcceeccCC
Confidence 6899999999999999999986531 1 1 12 23469999999876531 235689999
Q ss_pred CCceEEEEEEecCCeEEEEEcCcHHHHHhhccCChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEEEEe
Q 013242 81 TGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGL 160 (447)
Q Consensus 81 ~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~lG~ 160 (447)
..++|++++.+.++ .++||+++.+.+.|.. +.+..+++.++|+|++++|++. +++|+
T Consensus 285 ~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~-------~~~~~~~~~~~g~~~~~~a~~~-------------~~~g~ 341 (499)
T TIGR01494 285 VRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD-------LEEKVKELAQSGLRVLAVASKE-------------TLLGL 341 (499)
T ss_pred CCceEEEEEecCCc---EEEeCCHHHHHHhhHH-------HHHHHHHHHhCCCEEEEEEECC-------------eEEEE
Confidence 99999998875323 4789999999998741 3344556888999999999887 89999
Q ss_pred ccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchh
Q 013242 161 IPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240 (447)
Q Consensus 161 i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 240 (447)
+.++|++|++++++|+.|+++|++++|+|||+..++..+|+++|+ ++
T Consensus 342 i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi---------------------------------~~ 388 (499)
T TIGR01494 342 LGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI---------------------------------FA 388 (499)
T ss_pred EEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc---------------------------------ee
Confidence 999999999999999999999999999999999999999999997 58
Q ss_pred ccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHH
Q 013242 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRM 320 (447)
Q Consensus 241 ~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~i 320 (447)
+++|++|.++|+.+|++|+.|+|+|||.||+|||+.|||||+|+ ++.+||+++.++++..+..++.+||++++++
T Consensus 389 ~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i 463 (499)
T TIGR01494 389 RVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTI 463 (499)
T ss_pred ccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999997 6889999999999999999999999999999
Q ss_pred HHHHHHHH-hHHHHHHHH
Q 013242 321 RNYMVRGI-DGLSSTEFI 337 (447)
Q Consensus 321 ~~~~~~~~-~~~~~~~~l 337 (447)
++++.|++ .++..+++.
T Consensus 464 ~~~~~~~~~~n~~~~~~a 481 (499)
T TIGR01494 464 KSNIFWAIAYNLILIPLA 481 (499)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 99999999 555444333
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-42 Score=354.26 Aligned_cols=282 Identities=26% Similarity=0.342 Sum_probs=219.7
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccC--------CCChHHHHHHHHHhc--CC---CCCChHHHHHHHhhCCchhh-
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAG--------GVDADTVVLMAARAS--QV---ENLDVIDAAIVGMLADPKEA- 66 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~--------~~~~~~~l~~a~~~~--~~---~~~~pi~~ai~~~~~~~~~~- 66 (447)
||+.|||||||||...|.|...-- .... ....+.+..+|++.+ .. --.||+++|.+..++..-+.
T Consensus 479 vdvCCFDKTGTLT~d~lvv~Gvag-~~~~~~~~~~~s~~p~~t~~vlAscHsLv~le~~lVGDPlEKA~l~~v~W~~~k~ 557 (1160)
T KOG0209|consen 479 VDVCCFDKTGTLTEDDLVVEGVAG-LSADEGALTPASKAPNETVLVLASCHSLVLLEDKLVGDPLEKATLEAVGWNLEKK 557 (1160)
T ss_pred eeEEEecCCCccccccEEEEeccc-ccCCcccccchhhCCchHHHHHHHHHHHHHhcCcccCChHHHHHHHhcCcccccC
Confidence 689999999999999999987321 0111 112233444443332 12 23589999999987542211
Q ss_pred ---------hccceEEEEEecCCCCceEEEEEEec----CCeEEEEEcCcHHHHHhhccCChhhHHHHHHHHHHHHHhhh
Q 013242 67 ---------RADIQEVHFLPFDPTGKRTALTYIDS----EGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGL 133 (447)
Q Consensus 67 ---------~~~~~~~~~~pF~~~~kr~~v~~~~~----~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~ 133 (447)
-.++++.+.+.|+|.-|||+++.... +-+++..+|||||.|.+++. +.+..+++...+|+++|.
T Consensus 558 ~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~---dvP~dY~~iYk~ytR~Gs 634 (1160)
T KOG0209|consen 558 NSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLR---DVPKDYDEIYKRYTRQGS 634 (1160)
T ss_pred cccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHH---hCchhHHHHHHHHhhccc
Confidence 12578889999999999999987642 23688999999999999774 677889999999999999
Q ss_pred hhhhhhhcccCC--------CCcCCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCC
Q 013242 134 RSLAVAYQEVPE--------GSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGM 205 (447)
Q Consensus 134 r~l~vA~~~~~~--------~~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi 205 (447)
|||+++|+.++. ..+++.|++|+|.|++.|.-|+|+|++++|+.|++.+++|+|+||||+.||..+|+++||
T Consensus 635 RVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~i 714 (1160)
T KOG0209|consen 635 RVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGI 714 (1160)
T ss_pred eEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeee
Confidence 999999999972 246789999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcc---------------------------------------cccCCcchhhhhcCChhHHHhhccchhccChhh
Q 013242 206 GTNMYPSS---------------------------------------ALSGQDRDESIVALPVDELIEKADGFAGVFPEH 246 (447)
Q Consensus 206 ~~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~ 246 (447)
.....+.. ++.|...+.......+.+++....+|||+.|.|
T Consensus 715 v~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~Q 794 (1160)
T KOG0209|consen 715 VEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQ 794 (1160)
T ss_pred eccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhh
Confidence 75311111 111222221112222345566778999999999
Q ss_pred HHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCc
Q 013242 247 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADA 286 (447)
Q Consensus 247 K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a 286 (447)
|..++..+++.|+.++|||||.||+.|||+|+||||.-++
T Consensus 795 KE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~ 834 (1160)
T KOG0209|consen 795 KEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNN 834 (1160)
T ss_pred HHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhcC
Confidence 9999999999999999999999999999999999998643
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=368.56 Aligned_cols=310 Identities=28% Similarity=0.344 Sum_probs=249.1
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCchhhhccceEEEEEecCC
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDP 80 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~~~~~pF~~ 80 (447)
+|++|||||||||+|+|+|.+.. .. .+.++++++.+++.++..++| |+++|++.++.+.. ..... .|..
T Consensus 517 v~~v~fDKTGTLT~g~~~v~~~~--~~-~~~~~~~~l~~a~~~e~~s~h-p~a~Ai~~~~~~~~--~~~~~-----~~~~ 585 (834)
T PRK10671 517 LDTLVFDKTGTLTEGKPQVVAVK--TF-NGVDEAQALRLAAALEQGSSH-PLARAILDKAGDMT--LPQVN-----GFRT 585 (834)
T ss_pred CCEEEEcCCCccccCceEEEEEE--cc-CCCCHHHHHHHHHHHhCCCCC-HHHHHHHHHHhhCC--CCCcc-----cceE
Confidence 68999999999999999998743 22 356788889998888877665 99999998764211 01111 2222
Q ss_pred CCceEEEEEEecCCeEEEEEcCcHHHHHhhccCChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEEEEe
Q 013242 81 TGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGL 160 (447)
Q Consensus 81 ~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~lG~ 160 (447)
...+ .+... .+|. .+.+|+++++.+... ..+.+...+++++++|.++++++++. .++|+
T Consensus 586 ~~g~-Gv~~~-~~g~--~~~~G~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~ 644 (834)
T PRK10671 586 LRGL-GVSGE-AEGH--ALLLGNQALLNEQQV----DTKALEAEITAQASQGATPVLLAVDG-------------KAAAL 644 (834)
T ss_pred ecce-EEEEE-ECCE--EEEEeCHHHHHHcCC----ChHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEE
Confidence 1111 11111 2453 466799998865321 12345666778889999999999876 89999
Q ss_pred ccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchh
Q 013242 161 IPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240 (447)
Q Consensus 161 i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 240 (447)
+.+.|++||+++++|++|++.|++++|+|||+..++..+++++|++ .+|+
T Consensus 645 ~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~------------------------------~~~~ 694 (834)
T PRK10671 645 LAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID------------------------------EVIA 694 (834)
T ss_pred EEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC------------------------------EEEe
Confidence 9999999999999999999999999999999999999999999995 3688
Q ss_pred ccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHH
Q 013242 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRM 320 (447)
Q Consensus 241 ~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~i 320 (447)
++.|++|.++++.++.+++.|+|+|||.||++|++.||+||+||++++.++++||+++..+++++|..++++||+++.+|
T Consensus 695 ~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i 774 (834)
T PRK10671 695 GVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNM 774 (834)
T ss_pred CCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhccc--ccHHHHHHHHHhcccCCcccchhHHHH
Q 013242 321 RNYMVRGIDGLSSTEFIQVLELNFL--FTLDTVIAILQTAFTSKKDFGKEEREL 372 (447)
Q Consensus 321 ~~~~~~~~~~~~~~~~l~~~~~~~~--~pl~~~~~l~~~~~~~~~~~~~~~~~~ 372 (447)
++|+.|++.++...+.+.++++++. +.+.|+.-...|.+++..+..++.|..
T Consensus 775 ~~Nl~~a~~yn~~~i~~a~g~~~p~~g~~l~p~~a~~~m~~ss~~vv~nslrl~ 828 (834)
T PRK10671 775 KQNLLGAFIYNSLGIPIAAGILWPFTGTLLNPVVAGAAMALSSITVVSNANRLL 828 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHhchhhhhhcccCHHHHHHHhcccceeehhhhHHhc
Confidence 9999999944444444555554432 135555555889999999998887664
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=346.17 Aligned_cols=280 Identities=30% Similarity=0.403 Sum_probs=223.3
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCC--hHHHHHHHHHhcCCCCCChHHHHHHHhhCCchhhhccce-EEEEEe
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVD--ADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQ-EVHFLP 77 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~--~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~-~~~~~p 77 (447)
+|++|||||||||+|+|+|.+... . .+.+ .++++.+++.+++..+ ||++.|++.++...+..... + ..+.+|
T Consensus 246 v~~i~fDKTGTLT~~~~~v~~~~~--~-~~~~~~~~~~l~~a~~~e~~~~-hp~~~Ai~~~~~~~~~~~~~-~~~~~~~~ 320 (556)
T TIGR01525 246 VKTVVFDKTGTLTTGKPTVVDVEP--L-DDASISEEELLALAAALEQSSS-HPLARAIVRYAKKRGLELPK-QEDVEEVP 320 (556)
T ss_pred CCEEEEeCCCCCcCCceEEEEEEe--c-CCCCccHHHHHHHHHHHhccCC-ChHHHHHHHHHHhcCCCccc-ccCeeEec
Confidence 689999999999999999988542 2 2333 6788888888877655 49999999987532111000 1 111121
Q ss_pred cCCCCceEEEEEEecCCeEEEEEcCcHHHHHhhccCChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEE
Q 013242 78 FDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQF 157 (447)
Q Consensus 78 F~~~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~ 157 (447)
.+..... .+|. ..+..|+++++. ... .+. ..+...+.+++++|+++++++++. ++
T Consensus 321 ----~~gi~~~---~~g~-~~~~lg~~~~~~-~~~--~~~-~~~~~~~~~~~~~g~~~~~v~~~~-------------~~ 375 (556)
T TIGR01525 321 ----GKGVEAT---VDGQ-EEVRIGNPRLLE-LAA--EPI-SASPDLLNEGESQGKTVVFVAVDG-------------EL 375 (556)
T ss_pred ----CCeEEEE---ECCe-eEEEEecHHHHh-hcC--CCc-hhhHHHHHHHhhCCcEEEEEEECC-------------EE
Confidence 1122222 2342 356679998872 111 111 223455677889999999999865 99
Q ss_pred EEeccCCCCCCcchHHHHHHHHhCC-CeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhc
Q 013242 158 IGLIPLFDPPIHDSAETIRRALSLG-LGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKA 236 (447)
Q Consensus 158 lG~i~l~d~~r~~~~~~I~~l~~~G-i~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (447)
+|.+.++|+++|+++++|+.|++.| ++++|+|||+..++..+++++|+.
T Consensus 376 ~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~------------------------------ 425 (556)
T TIGR01525 376 LGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID------------------------------ 425 (556)
T ss_pred EEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC------------------------------
Confidence 9999999999999999999999999 999999999999999999999995
Q ss_pred cchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHH
Q 013242 237 DGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAI 316 (447)
Q Consensus 237 ~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~ 316 (447)
++|+++.|++|.++++.++..++.|+|+|||.||++|++.||+||+++++++.++..||+++.+++++.+..++++||++
T Consensus 426 ~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~ 505 (556)
T TIGR01525 426 EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLSSLPTAIDLSRKT 505 (556)
T ss_pred eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHH
Confidence 46888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-hHHHHHHHHHHH
Q 013242 317 FQRMRNYMVRGI-DGLSSTEFIQVL 340 (447)
Q Consensus 317 ~~~i~~~~~~~~-~~~~~~~~l~~~ 340 (447)
+++|++|+.|++ +++..+.+..++
T Consensus 506 ~~~i~~nl~~a~~~N~~~i~~a~~g 530 (556)
T TIGR01525 506 RRIIKQNLAWALGYNLVAIPLAAGG 530 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999 655555444333
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-39 Score=343.44 Aligned_cols=266 Identities=31% Similarity=0.453 Sum_probs=217.2
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCchhhhccceEEEEEecCC
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDP 80 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~~~~~pF~~ 80 (447)
+|++|||||||||+|+|+|.+.. .. .+.++++++.+++.+++.++| |+++|++.++...+.....+...+.+|
T Consensus 277 v~~i~fDKTGTLT~g~~~v~~i~--~~-~~~~~~~~l~~aa~~e~~s~H-Pia~Ai~~~~~~~~~~~~~~~~~~~~~--- 349 (562)
T TIGR01511 277 IDTVVFDKTGTLTQGKPTVTDVH--VF-GDRDRTELLALAAALEAGSEH-PLAKAIVSYAKEKGITLVEVSDFKAIP--- 349 (562)
T ss_pred CCEEEECCCCCCcCCCEEEEEEe--cC-CCCCHHHHHHHHHHHhccCCC-hHHHHHHHHHHhcCCCcCCCCCeEEEC---
Confidence 68999999999999999998853 22 356778899999888877665 999999988753221111122222222
Q ss_pred CCceEEEEEEecCCeEEEEEcCcHHHHHhhccCChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEEEEe
Q 013242 81 TGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGL 160 (447)
Q Consensus 81 ~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~lG~ 160 (447)
.+.+... .+| ..+..|+++++.+.. ... .++.++|.+++.++.+. +++|+
T Consensus 350 -g~Gi~~~---~~g--~~~~iG~~~~~~~~~---~~~--------~~~~~~g~~~~~~~~~~-------------~~~g~ 399 (562)
T TIGR01511 350 -GIGVEGT---VEG--TKIQLGNEKLLGENA---IKI--------DGKAEQGSTSVLVAVNG-------------ELAGV 399 (562)
T ss_pred -CceEEEE---ECC--EEEEEECHHHHHhCC---CCC--------ChhhhCCCEEEEEEECC-------------EEEEE
Confidence 1122222 234 456789999875421 111 12457888988888765 99999
Q ss_pred ccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchh
Q 013242 161 IPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240 (447)
Q Consensus 161 i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 240 (447)
+.++|++||+++++|++|++.|++++|+|||+...+..+++++|++ +|+
T Consensus 400 ~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-------------------------------~~~ 448 (562)
T TIGR01511 400 FALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-------------------------------VRA 448 (562)
T ss_pred EEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-------------------------------EEc
Confidence 9999999999999999999999999999999999999999999993 467
Q ss_pred ccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHH
Q 013242 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRM 320 (447)
Q Consensus 241 ~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~i 320 (447)
++.|++|.++++.++.+++.|+|+|||.||++|++.||+||+|+++++.++.+||+++.+++++.+..++.+||++++++
T Consensus 449 ~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i 528 (562)
T TIGR01511 449 EVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRI 528 (562)
T ss_pred cCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH-hHHHHH
Q 013242 321 RNYMVRGI-DGLSST 334 (447)
Q Consensus 321 ~~~~~~~~-~~~~~~ 334 (447)
++|+.|++ +++..+
T Consensus 529 ~qn~~~a~~~n~~~i 543 (562)
T TIGR01511 529 KQNLLWAFGYNVIAI 543 (562)
T ss_pred HHHHHHHHHHHHHHH
Confidence 99999999 554444
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=335.56 Aligned_cols=261 Identities=31% Similarity=0.428 Sum_probs=213.2
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCchhhhccceEEEEEecCC
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDP 80 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~~~~~pF~~ 80 (447)
+|++|||||||||+|+|+|.+... .+++.+++..+.... ||++.|++.++.+.+ .+.....+|.
T Consensus 246 v~~i~fDKTGTLT~~~~~v~~~~~---------~~~l~~a~~~e~~~~-hp~~~Ai~~~~~~~~----~~~~~~~~~g-- 309 (536)
T TIGR01512 246 IKTVAFDKTGTLTTGRPKVVDVVP---------AEVLRLAAAAEQASS-HPLARAIVDYARKRE----NVESVEEVPG-- 309 (536)
T ss_pred CCEEEECCCCCCcCCceEEEEeeH---------HHHHHHHHHHhccCC-CcHHHHHHHHHHhcC----CCcceEEecC--
Confidence 689999999999999999987431 268888887766555 599999998875421 2222333331
Q ss_pred CCceEEEEEEecCCeEEEEEcCcHHHHHhhccCChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEEEEe
Q 013242 81 TGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGL 160 (447)
Q Consensus 81 ~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~lG~ 160 (447)
+.+... .+|. .+..|+++++.+... ..+..+|.+++.++.+. .++|.
T Consensus 310 --~gi~~~---~~g~--~~~ig~~~~~~~~~~-------------~~~~~~~~~~~~v~~~~-------------~~~g~ 356 (536)
T TIGR01512 310 --EGVRAV---VDGG--EVRIGNPRSLEAAVG-------------ARPESAGKTIVHVARDG-------------TYLGY 356 (536)
T ss_pred --CeEEEE---ECCe--EEEEcCHHHHhhcCC-------------cchhhCCCeEEEEEECC-------------EEEEE
Confidence 111111 2454 345799887654211 14566788888777654 99999
Q ss_pred ccCCCCCCcchHHHHHHHHhCCC-eEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccch
Q 013242 161 IPLFDPPIHDSAETIRRALSLGL-GVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 239 (447)
Q Consensus 161 i~l~d~~r~~~~~~I~~l~~~Gi-~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 239 (447)
+.++|++||+++++|+.|+++|+ +++|+|||+..++..+++++|++ ++|
T Consensus 357 i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~------------------------------~~f 406 (536)
T TIGR01512 357 ILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID------------------------------EVH 406 (536)
T ss_pred EEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh------------------------------hhh
Confidence 99999999999999999999999 99999999999999999999995 358
Q ss_pred hccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEec-CchHHHHhhcchhccCCChhHHHHHHHHHHHHHH
Q 013242 240 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQ 318 (447)
Q Consensus 240 a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~-~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~ 318 (447)
+++.|++|..+++.++.+++.|+|+|||.||++|++.||+||+++ ++++.++.+||+++.+++++.+.+++.+||++++
T Consensus 407 ~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~ 486 (536)
T TIGR01512 407 AELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRR 486 (536)
T ss_pred hccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999 7899999999999999999999999999999999
Q ss_pred HHHHHHHHHH-hHHHHHHHHHHH
Q 013242 319 RMRNYMVRGI-DGLSSTEFIQVL 340 (447)
Q Consensus 319 ~i~~~~~~~~-~~~~~~~~l~~~ 340 (447)
++++|+.|++ +++..+.+...+
T Consensus 487 ~i~~nl~~a~~~n~~~i~~a~~G 509 (536)
T TIGR01512 487 IVKQNVVIALGIILLLILLALFG 509 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999 665555444433
|
. |
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=314.31 Aligned_cols=265 Identities=28% Similarity=0.407 Sum_probs=228.7
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCchh-hh-ccce-EEEEEe
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKE-AR-ADIQ-EVHFLP 77 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~~~-~~-~~~~-~~~~~p 77 (447)
||++..|||||+|.|+-.-.+.+ ...|.+.+++...|..++-.... |-.+.|+..+++... .+ .... .-.++|
T Consensus 299 vdtliLDKTGTIT~GnR~A~~f~---p~~gv~~~~la~aa~lsSl~DeT-pEGrSIV~LA~~~~~~~~~~~~~~~~~fvp 374 (681)
T COG2216 299 VDTLLLDKTGTITLGNRQASEFI---PVPGVSEEELADAAQLASLADET-PEGRSIVELAKKLGIELREDDLQSHAEFVP 374 (681)
T ss_pred ccEEEecccCceeecchhhhhee---cCCCCCHHHHHHHHHHhhhccCC-CCcccHHHHHHHhccCCCcccccccceeee
Confidence 69999999999999988777653 34689999999988888765543 777888876653221 11 1222 357899
Q ss_pred cCCCCceEEEEEEecCCeEEEEEcCcHHHHHhhccCCh-hhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcE
Q 013242 78 FDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKS-KIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQ 156 (447)
Q Consensus 78 F~~~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~-~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~ 156 (447)
|+.+.++..+-.. ++ ..+.||+.+.+........ ..++.++...++.++.|-++|+|+.+. +
T Consensus 375 FtA~TRmSGvd~~--~~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGTPL~V~~~~-------------~ 437 (681)
T COG2216 375 FTAQTRMSGVDLP--GG--REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVVENG-------------R 437 (681)
T ss_pred cceecccccccCC--CC--ceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCceEEEECC-------------E
Confidence 9988776655432 23 5678999999999887443 478889999999999999999999887 9
Q ss_pred EEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhc
Q 013242 157 FIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKA 236 (447)
Q Consensus 157 ~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (447)
++|++.+.|-++|+.+|-+.+||+.||+.+|+||||+.||..||++.|++
T Consensus 438 ~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVD------------------------------ 487 (681)
T COG2216 438 ILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD------------------------------ 487 (681)
T ss_pred EEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCch------------------------------
Confidence 99999999999999999999999999999999999999999999999997
Q ss_pred cchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHH
Q 013242 237 DGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAI 316 (447)
Q Consensus 237 ~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~ 316 (447)
+..|+++|++|.++|+.-|.+|+.|+|+|||.||+|+|.+||||+||.+++.+||+|+.+|=+++|-..+.+.+..|+++
T Consensus 488 dfiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMNsGTqAAkEAaNMVDLDS~PTKlievV~IGKql 567 (681)
T COG2216 488 DFIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQL 567 (681)
T ss_pred hhhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhccccHHHHHhhcccccCCCccceehHhhhhhhh
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999999999985
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.7e-29 Score=232.69 Aligned_cols=211 Identities=32% Similarity=0.414 Sum_probs=156.6
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCchhhhccceEEEEEecCC
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDP 80 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~~~~~pF~~ 80 (447)
|++||||||||||+|++.+ . . .....++.++...+..++| |+..++..+....... .... +|..
T Consensus 1 i~~i~fDktGTLt~~~~~v-~-----~---~~~~~~~~~~~~~~~~s~~-p~~~~~~~~~~~~~~~-~~~~-----~~~~ 64 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV-A-----P---PSNEAALAIAAALEQGSEH-PIGKAIVEFAKNHQWS-KSLE-----SFSE 64 (215)
T ss_dssp ESEEEEECCTTTBESHHEE-E-----S---CSHHHHHHHHHHHHCTSTS-HHHHHHHHHHHHHHHH-SCCE-----EEEE
T ss_pred CeEEEEecCCCcccCeEEE-E-----e---ccHHHHHHHHHHhhhcCCC-cchhhhhhhhhhccch-hhhh-----hhee
Confidence 6899999999999999999 1 1 5667777888777676665 9999999876542211 1111 1221
Q ss_pred CCceEEEEEEecCCeEEEEEcCcHHHHHhhccCChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEEEEe
Q 013242 81 TGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGL 160 (447)
Q Consensus 81 ~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~lG~ 160 (447)
...++..... ++. +. |+++++....... .............|...+.++.+ +.++|.
T Consensus 65 ~~~~~~~~~~--~~~---~~-g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 121 (215)
T PF00702_consen 65 FIGRGISGDV--DGI---YL-GSPEWIHELGIRV----ISPDLVEEIQESQGRTVIVLAVN-------------LIFLGL 121 (215)
T ss_dssp ETTTEEEEEE--HCH---EE-HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHCEEEEES-------------HEEEEE
T ss_pred eeeccccccc--ccc---cc-ccchhhhhccccc----cccchhhhHHHhhCCcccceeec-------------CeEEEE
Confidence 2222222111 121 33 8888887754311 11222223335566666666643 499999
Q ss_pred ccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchh
Q 013242 161 IPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240 (447)
Q Consensus 161 i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 240 (447)
+.+.|++||+++++|+.|+++|++++|+|||+..++..+++++||... .+|+
T Consensus 122 ~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~----------------------------~v~a 173 (215)
T PF00702_consen 122 FGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDS----------------------------IVFA 173 (215)
T ss_dssp EEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSE----------------------------EEEE
T ss_pred EeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccccc----------------------------cccc
Confidence 999999999999999999999999999999999999999999999421 3789
Q ss_pred cc--ChhhH--HHHHHHHhhcCCEEEEEcCCCCchhHHhhcC
Q 013242 241 GV--FPEHK--YEIVKHLQARNHICGMIGNGVNDAPALKKAD 278 (447)
Q Consensus 241 ~~--~p~~K--~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~ 278 (447)
++ +|++| ..+++.|+.+++.|+|+|||.||++|+++||
T Consensus 174 ~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 174 RVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp SHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99 99999 9999999987779999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.6e-16 Score=129.02 Aligned_cols=123 Identities=28% Similarity=0.409 Sum_probs=109.9
Q ss_pred EEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhh
Q 013242 156 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEK 235 (447)
Q Consensus 156 ~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (447)
...+.++---.+-+++.++|++|++. ++|++.|||...+....|+.+|++..
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 67888998999999999999999999 99999999999999999999999633
Q ss_pred ccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEe-c--CchHHHHhhcchhccCCChhHHHHH
Q 013242 236 ADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV-A--DATDAARSAADIVLTEPGLNVIITA 309 (447)
Q Consensus 236 ~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~-~--~a~~~a~~aAD~vl~~~~~~~i~~~ 309 (447)
.+|+...|+.|..+++.|++.+..|+|+|||+||.+||+.||+||+. + +.+..+..+||+|+.+ ...++++
T Consensus 72 -rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ldl 145 (152)
T COG4087 72 -RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILDL 145 (152)
T ss_pred -eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHHH
Confidence 47899999999999999999999999999999999999999999987 3 5778888999999855 4444443
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=5.7e-13 Score=129.19 Aligned_cols=67 Identities=22% Similarity=0.226 Sum_probs=59.6
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHH
Q 013242 246 HKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 312 (447)
Q Consensus 246 ~K~~iV~~lq~~-g---~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~ 312 (447)
+|...++.+.+. | ..|++||||.||++||+.|++||||+||.+.+|.+||+|+.+++.++|.++|+.
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~ 266 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEK 266 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHHH
Confidence 577777777664 2 459999999999999999999999999999999999999999999999988863
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.3e-12 Score=123.57 Aligned_cols=153 Identities=27% Similarity=0.339 Sum_probs=106.0
Q ss_pred EeccCCCC-CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--Ccccc-c---CC-----cchh----
Q 013242 159 GLIPLFDP-PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSAL-S---GQ-----DRDE---- 222 (447)
Q Consensus 159 G~i~l~d~-~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~--~~~~~-~---~~-----~~~~---- 222 (447)
|.+.-.|. +.+.+.++|++|++.|++++++||++...+..+.+.+|+....+ +...+ . +. ....
T Consensus 12 GTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~ 91 (230)
T PRK01158 12 GTITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKA 91 (230)
T ss_pred CCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHH
Confidence 33333444 78999999999999999999999999999999999999864211 11111 0 00 0000
Q ss_pred ------hh----------------------hcCChh---HHHhhcc---------chhccChh--hHHHHHHHHhhc---
Q 013242 223 ------SI----------------------VALPVD---ELIEKAD---------GFAGVFPE--HKYEIVKHLQAR--- 257 (447)
Q Consensus 223 ------~~----------------------~~~~~~---~~~~~~~---------v~a~~~p~--~K~~iV~~lq~~--- 257 (447)
.. ...+.+ +.+.+.. .+.++.|. .|...++.+.+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i 171 (230)
T PRK01158 92 YSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGI 171 (230)
T ss_pred HHHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCC
Confidence 00 000000 1111100 01233333 388888777654
Q ss_pred -CCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 013242 258 -NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 258 -g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
...++++||+.||++|++.|++|+||+|+.+.+|++||+|+.+++.++|.++|+
T Consensus 172 ~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 172 DPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 345999999999999999999999999999999999999999999999998886
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.38 E-value=3.3e-12 Score=123.54 Aligned_cols=154 Identities=19% Similarity=0.197 Sum_probs=108.8
Q ss_pred EeccCCCC-CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC---------cccccCCcch-------
Q 013242 159 GLIPLFDP-PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP---------SSALSGQDRD------- 221 (447)
Q Consensus 159 G~i~l~d~-~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~---------~~~~~~~~~~------- 221 (447)
|.+.-.+. +.+.++++|+++++.|++++++||++...+..+.+++++....+. ...+.....+
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 44444444 899999999999999999999999999999999999999751110 0000000000
Q ss_pred -------------------------h---------------------hhh-------c---CChhHHHh----hc-----
Q 013242 222 -------------------------E---------------------SIV-------A---LPVDELIE----KA----- 236 (447)
Q Consensus 222 -------------------------~---------------------~~~-------~---~~~~~~~~----~~----- 236 (447)
. ... . ....++.. ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 0 000 0 00011100 00
Q ss_pred ------cchhccCh--hhHHHHHHHHhhc-CC---EEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChh
Q 013242 237 ------DGFAGVFP--EHKYEIVKHLQAR-NH---ICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLN 304 (447)
Q Consensus 237 ------~v~a~~~p--~~K~~iV~~lq~~-g~---~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~ 304 (447)
..+.++.| .+|+..++.+.+. |- .|+++||+.||++||+.|+.||||+||.+.++..||++...++.+
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~ 251 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDED 251 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccch
Confidence 00133444 3699888888774 43 499999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 013242 305 VIITAVLI 312 (447)
Q Consensus 305 ~i~~~i~~ 312 (447)
+|.++|+.
T Consensus 252 Gv~~~l~~ 259 (264)
T COG0561 252 GVAEALEK 259 (264)
T ss_pred HHHHHHHH
Confidence 99998874
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.4e-12 Score=125.12 Aligned_cols=146 Identities=14% Similarity=0.187 Sum_probs=102.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--Cccccc---C-----------------------
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSALS---G----------------------- 217 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~--~~~~~~---~----------------------- 217 (447)
.+.+.++++|++|++.|++++++||++...+..+.+++|++...+ +...+. +
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 98 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWDT 98 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhhc
Confidence 588999999999999999999999999999999999999864211 000000 0
Q ss_pred ---------C------cchhh-----hhc-----CChh--------------------HH---Hhh-----cc------c
Q 013242 218 ---------Q------DRDES-----IVA-----LPVD--------------------EL---IEK-----AD------G 238 (447)
Q Consensus 218 ---------~------~~~~~-----~~~-----~~~~--------------------~~---~~~-----~~------v 238 (447)
. ..... ... .... ++ +.. .. .
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~ 178 (272)
T PRK15126 99 RASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSATD 178 (272)
T ss_pred CcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 0 00000 000 0000 00 000 00 0
Q ss_pred hhccChh--hHHHHHHHHhhc-C---CEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcch--hccCCChhHHHHHH
Q 013242 239 FAGVFPE--HKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADI--VLTEPGLNVIITAV 310 (447)
Q Consensus 239 ~a~~~p~--~K~~iV~~lq~~-g---~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~--vl~~~~~~~i~~~i 310 (447)
+.+++|. .|...++.|.+. | ..|++||||.||++||+.|++||||+||.+.+|++||+ |+.+++.++|..+|
T Consensus 179 ~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l 258 (272)
T PRK15126 179 CLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYL 258 (272)
T ss_pred EEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHH
Confidence 1233343 588888888765 2 35999999999999999999999999999999999997 77789999999888
Q ss_pred H
Q 013242 311 L 311 (447)
Q Consensus 311 ~ 311 (447)
+
T Consensus 259 ~ 259 (272)
T PRK15126 259 T 259 (272)
T ss_pred H
Confidence 6
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=3.8e-12 Score=123.17 Aligned_cols=66 Identities=18% Similarity=0.241 Sum_probs=58.3
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcc--hhccCCChhHHHHHHH
Q 013242 246 HKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAAD--IVLTEPGLNVIITAVL 311 (447)
Q Consensus 246 ~K~~iV~~lq~~-g---~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD--~vl~~~~~~~i~~~i~ 311 (447)
+|...++.+.+. | ..|++|||+.||++||+.|++||||+||.+.+|++|| .|+.+++.++|.++|+
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 488888877664 2 3599999999999999999999999999999999988 7888899999998886
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=3.7e-12 Score=126.13 Aligned_cols=131 Identities=19% Similarity=0.243 Sum_probs=100.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchh-ccCh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA-GVFP 244 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a-~~~p 244 (447)
++.|++.+.|+.|++.|+++.++||.....+..+.+++|++....+...+...... . .+.. -+..
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~lt----g----------~v~g~iv~~ 246 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLT----G----------NVLGDIVDA 246 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEE----e----------EecCccCCc
Confidence 58999999999999999999999999988899999999985311100000000000 0 0000 1234
Q ss_pred hhHHHHHHHHhhc----CCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 013242 245 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 245 ~~K~~iV~~lq~~----g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
+.|.++++.+.++ ...|+++|||.||++|++.||+|||| |+.+.+++.||+++..++++++..++-
T Consensus 247 k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 247 QYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred ccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 6788888887654 35799999999999999999999999 999999999999999999999887653
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.2e-11 Score=114.89 Aligned_cols=131 Identities=16% Similarity=0.154 Sum_probs=99.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+.|+.+++.| ++.++||.....+..+++++|++....+...+.+.. .+. ......++
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g---~~t------------G~~~~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD---RVV------------GYQLRQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCC---eeE------------CeeecCcc
Confidence 57999999999999975 999999999999999999999963221111111100 000 00113577
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLIS 313 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~ 313 (447)
+|..+++.+++.+..++++|||.||++|++.||+||++ ++.+.++++||=.-.-.+.+.+..++.++
T Consensus 132 ~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~-~ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF-HAPENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEe-cCCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 89999999988888899999999999999999999999 66666777776665556788888888775
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.29 E-value=9.7e-12 Score=116.56 Aligned_cols=145 Identities=21% Similarity=0.250 Sum_probs=101.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--CcccccC--------Ccchhhhh----------
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSALSG--------QDRDESIV---------- 225 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~--~~~~~~~--------~~~~~~~~---------- 225 (447)
.+.+.+.++|++|++.|++++++||++...+..+++.+++....+ +...+.. ......+.
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 488999999999999999999999999999999999999864211 0101000 00000000
Q ss_pred -----c------------CC---hhHHHhhcc-------chhccCh--hhHHHHHHHHhhc-C---CEEEEEcCCCCchh
Q 013242 226 -----A------------LP---VDELIEKAD-------GFAGVFP--EHKYEIVKHLQAR-N---HICGMIGNGVNDAP 272 (447)
Q Consensus 226 -----~------------~~---~~~~~~~~~-------v~a~~~p--~~K~~iV~~lq~~-g---~~v~~iGDg~ND~~ 272 (447)
. .. ..+.+.... .+..++| ..|...++.+.+. | ..++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0 00 000111100 0112233 4788888887664 2 35999999999999
Q ss_pred HHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHH
Q 013242 273 ALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 273 al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i 310 (447)
|++.|++|+||+|+.+.++..||+|+.+++.++|.++|
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEVL 215 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhhC
Confidence 99999999999999999999999999988898887653
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.29 E-value=8.9e-12 Score=117.34 Aligned_cols=146 Identities=23% Similarity=0.279 Sum_probs=101.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--Ccccc-cCC--------cchhh-----------
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSAL-SGQ--------DRDES----------- 223 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~--~~~~~-~~~--------~~~~~----------- 223 (447)
.+.+.+.++|+++++.|+.++++||++...+..+.+.+|+....+ +...+ ... .....
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 478899999999999999999999999999999999999653211 00000 000 00000
Q ss_pred ----hh-c-------------CCh---hHHHhhcc---------chhccCh--hhHHHHHHHHhhc----CCEEEEEcCC
Q 013242 224 ----IV-A-------------LPV---DELIEKAD---------GFAGVFP--EHKYEIVKHLQAR----NHICGMIGNG 267 (447)
Q Consensus 224 ----~~-~-------------~~~---~~~~~~~~---------v~a~~~p--~~K~~iV~~lq~~----g~~v~~iGDg 267 (447)
.. . .+. ..+..... .+.++.| .+|...++.+.++ ...|++|||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 00 0 000 00111100 1122333 3688888887664 2469999999
Q ss_pred CCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhH----HHHHHH
Q 013242 268 VNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV----IITAVL 311 (447)
Q Consensus 268 ~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~----i~~~i~ 311 (447)
.||++|++.|++|+||+|+.+.+|+.||+|+.+++.++ |..+|+
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999999999999999999889999 665554
|
catalyze the same reaction as SPP. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.1e-11 Score=129.09 Aligned_cols=66 Identities=24% Similarity=0.321 Sum_probs=58.6
Q ss_pred hHHHHHHHHhhcC----CEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 013242 246 HKYEIVKHLQARN----HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 246 ~K~~iV~~lq~~g----~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
+|...++.|.+.. ..|++||||.||++||+.|++||||+||.+.+|++||+|+.+++.+||..+|+
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 4677777776542 35999999999999999999999999999999999999999999999998886
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.1e-11 Score=114.58 Aligned_cols=147 Identities=18% Similarity=0.222 Sum_probs=102.4
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--Ccccc-cC-----------------------
Q 013242 164 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSAL-SG----------------------- 217 (447)
Q Consensus 164 ~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~--~~~~~-~~----------------------- 217 (447)
...+.+.+.++|++|+++|++++++||+....+..+..++++....+ +...+ ..
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 34588999999999999999999999999999999999999863111 00000 00
Q ss_pred -----------------Cc-chh-------------------hhhcCC------------hhH----HHhhc--------
Q 013242 218 -----------------QD-RDE-------------------SIVALP------------VDE----LIEKA-------- 236 (447)
Q Consensus 218 -----------------~~-~~~-------------------~~~~~~------------~~~----~~~~~-------- 236 (447)
.. ... ...... ... +.+..
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 00 000 000000 000 00000
Q ss_pred --cchhccCh--hhHHHHHHHHhhc----CCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHH
Q 013242 237 --DGFAGVFP--EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIIT 308 (447)
Q Consensus 237 --~v~a~~~p--~~K~~iV~~lq~~----g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~ 308 (447)
..+..++| ..|...++.+.+. ...++++||+.||.+||+.|+.|+||+|+++.++..||+++...+-++|.+
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~ 252 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAK 252 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHH
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHH
Confidence 01223334 4699888888763 357999999999999999999999999999999999999999888899987
Q ss_pred HH
Q 013242 309 AV 310 (447)
Q Consensus 309 ~i 310 (447)
+|
T Consensus 253 ~i 254 (254)
T PF08282_consen 253 AI 254 (254)
T ss_dssp HH
T ss_pred hC
Confidence 65
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=7.9e-11 Score=114.15 Aligned_cols=66 Identities=23% Similarity=0.333 Sum_probs=57.9
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 013242 246 HKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 246 ~K~~iV~~lq~~-g---~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
.|...++.+.++ | ..|++|||+.||++|++.|++|+||+|+.+.++..||+|+.+++.++|.++|+
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 477777666543 2 35999999999999999999999999999999999999999999999998886
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.20 E-value=4.6e-11 Score=107.44 Aligned_cols=104 Identities=18% Similarity=0.251 Sum_probs=82.8
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhcc--ChhhHHHH
Q 013242 173 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV--FPEHKYEI 250 (447)
Q Consensus 173 ~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~--~p~~K~~i 250 (447)
..|+.|++.|+++.++|+.....+..+.+.+|+.. .|... .|+....+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~------------------------------~f~~~kpkp~~~~~~ 90 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR------------------------------FHEGIKKKTEPYAQM 90 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE------------------------------EEecCCCCHHHHHHH
Confidence 46899999999999999999999999999999951 11111 23333444
Q ss_pred HHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHH
Q 013242 251 VKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVI 306 (447)
Q Consensus 251 V~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i 306 (447)
++.++-....|++|||+.||++|++.|++++||+|+.+.++..|++|+..++-.++
T Consensus 91 ~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~~~g~ 146 (169)
T TIGR02726 91 LEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARGGHGA 146 (169)
T ss_pred HHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCCCCCH
Confidence 44444444579999999999999999999999999999999999999876665543
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.8e-10 Score=107.59 Aligned_cols=122 Identities=20% Similarity=0.182 Sum_probs=91.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchh-ccC
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA-GVF 243 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a-~~~ 243 (447)
.++.|++.+.++.+++.|++|+++||.....+.++++++|++....+.......... . .+.. .+.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~lt----G----------~v~g~~~~ 141 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLT----G----------RVVGPICD 141 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEe----c----------eeeeeecC
Confidence 679999999999999999999999999999999999999997543222211110000 0 1122 234
Q ss_pred hhhHHHHHHHHhhc-CC---EEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCC
Q 013242 244 PEHKYEIVKHLQAR-NH---ICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEP 301 (447)
Q Consensus 244 p~~K~~iV~~lq~~-g~---~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~ 301 (447)
.+.|...++.+.+. |. .+.++|||.||.|||+.||.+|++ |+.+..+..|+......
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~-n~~~~l~~~a~~~~~~~ 202 (212)
T COG0560 142 GEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAV-NPKPKLRALADVRIWPI 202 (212)
T ss_pred cchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEe-CcCHHHHHHHHHhcChh
Confidence 56788888666653 44 599999999999999999999999 66666777788776543
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.15 E-value=2e-10 Score=107.84 Aligned_cols=129 Identities=21% Similarity=0.272 Sum_probs=94.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhc-cCh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG-VFP 244 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~-~~p 244 (447)
++.|++.+.|+.|++.|+++.++||.....+..+.+.+|+..- +......... .+.. .+... ..+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~-~~~~~~~~~~---~~~~----------~~~~~~~~~ 150 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAA-FANRLEVEDG---KLTG----------LVEGPIVDA 150 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce-EeeEEEEECC---EEEE----------EecCcccCC
Confidence 5899999999999999999999999999999999999998631 1100000000 0000 00011 123
Q ss_pred hhHHHHHHHHhhcC----CEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHH
Q 013242 245 EHKYEIVKHLQARN----HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITA 309 (447)
Q Consensus 245 ~~K~~iV~~lq~~g----~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~ 309 (447)
..|..+++.+.++. ..|+++||+.||++|++.||+++++ ++.+.++.+||+++.++++..+..+
T Consensus 151 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~-~~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 151 SYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAF-NAKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEe-CCCHHHHHhchhccCCCCHHHHHhh
Confidence 34667776655442 3599999999999999999999999 5678888999999999998887654
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.5e-10 Score=102.82 Aligned_cols=105 Identities=26% Similarity=0.354 Sum_probs=83.1
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhhHHHHHHH
Q 013242 174 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKH 253 (447)
Q Consensus 174 ~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~K~~iV~~ 253 (447)
+|++|++.|+++.++||+....+..+.+.+|+..- |... ..|.+.++.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~------------------------------~~~~--~~k~~~~~~ 83 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL------------------------------YQGQ--SNKLIAFSD 83 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE------------------------------Eecc--cchHHHHHH
Confidence 89999999999999999999999999999998521 1111 234444444
Q ss_pred Hhh----cCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhH-HHHHH
Q 013242 254 LQA----RNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV-IITAV 310 (447)
Q Consensus 254 lq~----~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~-i~~~i 310 (447)
+.+ ....|+|+||+.||++|++.|+++++|.++.+..+..||+++..+.-++ +.+++
T Consensus 84 ~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~ 145 (154)
T TIGR01670 84 ILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVC 145 (154)
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHH
Confidence 332 3457999999999999999999999999999999999999998776444 54444
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.7e-10 Score=111.10 Aligned_cols=65 Identities=23% Similarity=0.292 Sum_probs=57.9
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHH
Q 013242 246 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 246 ~K~~iV~~lq~~----g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i 310 (447)
+|...++.+.+. ...++++||+.||++|++.|++|+||+|+.+.++..||+++.+++.++|..+|
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhhC
Confidence 588888888765 24699999999999999999999999999999999999999999999987653
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=99.08 E-value=6.8e-10 Score=106.97 Aligned_cols=66 Identities=18% Similarity=0.210 Sum_probs=54.9
Q ss_pred hHHHHHHHHhhc------CCEEEEEcCCCCchhHHhhcCeeEEecCch---HHHHhh---cchhccCCChhHHHHHHH
Q 013242 246 HKYEIVKHLQAR------NHICGMIGNGVNDAPALKKADIGIAVADAT---DAARSA---ADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 246 ~K~~iV~~lq~~------g~~v~~iGDg~ND~~al~~A~vGIa~~~a~---~~a~~a---AD~vl~~~~~~~i~~~i~ 311 (447)
.|...++.+.+. ...++++||+.||.+||+.|++||||+|+. +.+++. +++|+.+++-+||.++|+
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 476666666543 456999999999999999999999999987 478876 458998999999998886
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.03 E-value=6.6e-10 Score=95.77 Aligned_cols=114 Identities=24% Similarity=0.413 Sum_probs=90.7
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhhHHHHHHH
Q 013242 174 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKH 253 (447)
Q Consensus 174 ~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~K~~iV~~ 253 (447)
.|+.|.+.||+|.++||++...+..-++.|||. .+|-. -++|....+.
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~------------------------------~~~qG--~~dK~~a~~~ 90 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIK------------------------------HLYQG--ISDKLAAFEE 90 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCc------------------------------eeeec--hHhHHHHHHH
Confidence 589999999999999999999999999999995 11221 3456666655
Q ss_pred Hhhc----CCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCC----hhHHHHHHHHHHHHHHH
Q 013242 254 LQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPG----LNVIITAVLISRAIFQR 319 (447)
Q Consensus 254 lq~~----g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~----~~~i~~~i~~~r~~~~~ 319 (447)
|.++ ...|+++||..||.|+|+.+++++|+.++.+..++.||+|+...+ ..-+.++|..++..++-
T Consensus 91 L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~ 164 (170)
T COG1778 91 LLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDE 164 (170)
T ss_pred HHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHH
Confidence 5443 446999999999999999999999999999999999999998765 34445566656555443
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.3e-09 Score=106.05 Aligned_cols=66 Identities=21% Similarity=0.168 Sum_probs=54.0
Q ss_pred hHHHHHHHHhh-------cCCEEEEEcCCCCchhHHhhcCeeEEecCch-H--H---HHhhcchhccCCChhHHHHHHH
Q 013242 246 HKYEIVKHLQA-------RNHICGMIGNGVNDAPALKKADIGIAVADAT-D--A---ARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 246 ~K~~iV~~lq~-------~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~-~--~---a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
+|...++.+.+ ....|+++||+.||++||+.|++||||+|+. + . .+..||+++...+-+|+.++++
T Consensus 187 sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~ 265 (271)
T PRK03669 187 GKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLD 265 (271)
T ss_pred CHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHH
Confidence 57777776655 3456999999999999999999999999654 2 2 3457999999999999998886
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=2.4e-09 Score=97.93 Aligned_cols=113 Identities=25% Similarity=0.363 Sum_probs=85.8
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhhHHHHHH
Q 013242 173 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVK 252 (447)
Q Consensus 173 ~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~K~~iV~ 252 (447)
.+|+.|++.|+++.++||+....+..+++.+|+.. +|.. .+.|...++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~------------------------------~f~g--~~~k~~~l~ 102 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH------------------------------LYQG--QSNKLIAFS 102 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce------------------------------eecC--CCcHHHHHH
Confidence 68999999999999999999999999999999851 1111 133555554
Q ss_pred HHhh----cCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCC----hhHHHHHHHHHHHHH
Q 013242 253 HLQA----RNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPG----LNVIITAVLISRAIF 317 (447)
Q Consensus 253 ~lq~----~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~----~~~i~~~i~~~r~~~ 317 (447)
.+.+ ....|+||||+.||++|++.|+++++++++.+..+..||+++..++ ...+.+.|...|.-|
T Consensus 103 ~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~~~~ 175 (183)
T PRK09484 103 DLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQGKL 175 (183)
T ss_pred HHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhcCCh
Confidence 4433 2346999999999999999999999999888888999999997544 344455554444333
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.94 E-value=3.5e-09 Score=103.06 Aligned_cols=67 Identities=24% Similarity=0.312 Sum_probs=56.2
Q ss_pred hHHHHHHHHhh----cC-CEEEEEcCCCCchhHHhhcCeeEEecCchHHHH----hhc-chhc--cCCChhHHHHHHHH
Q 013242 246 HKYEIVKHLQA----RN-HICGMIGNGVNDAPALKKADIGIAVADATDAAR----SAA-DIVL--TEPGLNVIITAVLI 312 (447)
Q Consensus 246 ~K~~iV~~lq~----~g-~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~----~aA-D~vl--~~~~~~~i~~~i~~ 312 (447)
.|...++.+.+ .. ..|+++||+.||++|++.|++|+||+||.+.++ .+| +.+. ..++-+|+.++|..
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~ 268 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAINK 268 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHHH
Confidence 67776766654 35 889999999999999999999999999999999 666 6777 67788999888863
|
|
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=98.93 E-value=2.1e-09 Score=86.62 Aligned_cols=64 Identities=30% Similarity=0.383 Sum_probs=53.3
Q ss_pred CCChHHHHHHHhhCCc------hhhhccceEEEEEecCCCCceEEEEEEecCCeEEEEEcCcHHHHHhhcc
Q 013242 48 NLDVIDAAIVGMLADP------KEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLH 112 (447)
Q Consensus 48 ~~~pi~~ai~~~~~~~------~~~~~~~~~~~~~pF~~~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~ 112 (447)
..+|.|.|++.++... ...+..+++++.+||||.+|||+++++ .++.+++++|||||.|+++|+
T Consensus 20 ~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct 89 (91)
T PF13246_consen 20 IGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCT 89 (91)
T ss_pred cCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcC
Confidence 3468999998876533 356788999999999999999999998 334567799999999999996
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.7e-08 Score=93.65 Aligned_cols=129 Identities=19% Similarity=0.223 Sum_probs=91.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+.++.|++. +++.++|+.....+..+.+++|+..-............ .. .+....|.
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~---i~------------~~~~~~p~ 131 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGM---IT------------GYDLRQPD 131 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCe---EE------------Cccccccc
Confidence 3689999999999999 99999999999999999999998521111000000000 00 00112367
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcch-hccCCChhHHHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADI-VLTEPGLNVIITAVLI 312 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~-vl~~~~~~~i~~~i~~ 312 (447)
.|...++.++..+..++|+|||.||++|.+.|++|+.++.........++. ++ +++..+...+..
T Consensus 132 ~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l~~ 197 (205)
T PRK13582 132 GKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAIDK 197 (205)
T ss_pred hHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHHHH
Confidence 788889988888899999999999999999999999886544434445555 44 456666655543
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.7e-08 Score=93.09 Aligned_cols=117 Identities=25% Similarity=0.327 Sum_probs=82.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
+++|++.+.|+.|++.|+++.++|+.....+..+.+.+|+.. .+.......... ... -..+....|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~-~~~~~~~~~~~g--~~~----------p~~~~~~~~~ 146 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDY-VYSNELVFDEKG--FIQ----------PDGIVRVTFD 146 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCe-EEEEEEEEcCCC--eEe----------cceeeEEccc
Confidence 589999999999999999999999999999999999999752 111111110000 000 0011123455
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcc
Q 013242 246 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAAD 295 (447)
Q Consensus 246 ~K~~iV~~lq~~----g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD 295 (447)
.|..+++.+.++ ...++++||+.||++|++.||++++++......+.|+|
T Consensus 147 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred cHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 677777666543 34599999999999999999999999765555666665
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.74 E-value=4.2e-08 Score=93.26 Aligned_cols=67 Identities=16% Similarity=0.176 Sum_probs=59.4
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcc----hhccCCChhHHHHHHHH
Q 013242 246 HKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAAD----IVLTEPGLNVIITAVLI 312 (447)
Q Consensus 246 ~K~~iV~~lq~~-g---~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD----~vl~~~~~~~i~~~i~~ 312 (447)
.|...++.+.++ | ..|+++||+.||.+||+.+++||+|+|+.+.++..|| +|...++-.++.++|..
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 688888888764 3 2589999999999999999999999999999999999 88888889999998863
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.73 E-value=2.1e-08 Score=89.42 Aligned_cols=122 Identities=20% Similarity=0.289 Sum_probs=82.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCC-CCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTN-MYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
+.|++++.++.|++.|.+|+++||.....+.+++.+|||+-. .+......+.+-. +......+ .-....
T Consensus 89 lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk--~~gfd~~~--------ptsdsg 158 (227)
T KOG1615|consen 89 LTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGK--YLGFDTNE--------PTSDSG 158 (227)
T ss_pred cCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCc--ccccccCC--------ccccCC
Confidence 679999999999999999999999999999999999999852 2222221111100 00000000 011234
Q ss_pred hHHHHHHHHhhc--CCEEEEEcCCCCchhHHhhcCeeEEec-C-chHHHHhhcchhc
Q 013242 246 HKYEIVKHLQAR--NHICGMIGNGVNDAPALKKADIGIAVA-D-ATDAARSAADIVL 298 (447)
Q Consensus 246 ~K~~iV~~lq~~--g~~v~~iGDg~ND~~al~~A~vGIa~~-~-a~~~a~~aAD~vl 298 (447)
.|+++++.+++. ...++|||||.||.+|+..|+.=|+.+ + -.+.++..|++-+
T Consensus 159 gKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~g~~~r~~vk~nak~~~ 215 (227)
T KOG1615|consen 159 GKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFGGNVIREGVKANAKWYV 215 (227)
T ss_pred ccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccCCceEcHhhHhccHHHH
Confidence 689999998874 446999999999999999987777765 2 2333444455443
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.64 E-value=2.5e-07 Score=86.71 Aligned_cols=137 Identities=15% Similarity=0.094 Sum_probs=88.4
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC-cccccCCcchhhhhcCChhHHHhhccch-hcc
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP-SSALSGQDRDESIVALPVDELIEKADGF-AGV 242 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~-a~~ 242 (447)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++.....+. ...+.+..... ..+..+ ... ..-
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~---~~p~~~-----~~~~~~~ 140 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHI---DWPHPC-----DGTCQNQ 140 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEE---eCCCCC-----ccccccC
Confidence 36899999999999999999999999999999999988754332221 11222211110 000000 000 001
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHH--hhcchhccCCChhHHHHHHH
Q 013242 243 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAAR--SAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 243 ~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~--~aAD~vl~~~~~~~i~~~i~ 311 (447)
....|..+++.++.....++|+|||.||.+|++.||+.+|-+.-.+..+ ..+.+.. ++|..|...+.
T Consensus 141 cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 141 CGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred CCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 1357999999988888889999999999999999999877542111111 1122222 55777766654
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.1e-07 Score=91.23 Aligned_cols=148 Identities=16% Similarity=0.110 Sum_probs=98.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCC--C--Ccccc-cCC--cchh---------------
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNM--Y--PSSAL-SGQ--DRDE--------------- 222 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~--~--~~~~~-~~~--~~~~--------------- 222 (447)
.+..|...++|+++++.|+.++++||+.......+.+++++..+. + +...+ .+. ..+.
T Consensus 20 ~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (249)
T TIGR01485 20 NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIV 99 (249)
T ss_pred hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHH
Confidence 456789999999999999999999999999999999999876431 1 11111 000 0000
Q ss_pred --hh---hcC--------------------C----hhH---HHhh----cc------chhccCh--hhHHHHHHHHhhc-
Q 013242 223 --SI---VAL--------------------P----VDE---LIEK----AD------GFAGVFP--EHKYEIVKHLQAR- 257 (447)
Q Consensus 223 --~~---~~~--------------------~----~~~---~~~~----~~------v~a~~~p--~~K~~iV~~lq~~- 257 (447)
.. ... . ..+ .+.. .. .+..+.| ..|...++.+.+.
T Consensus 100 ~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~ 179 (249)
T TIGR01485 100 VAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKL 179 (249)
T ss_pred HHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHc
Confidence 00 000 0 000 0000 00 0112333 4688888888664
Q ss_pred ---CCEEEEEcCCCCchhHHhh-cCeeEEecCchHHHHhhcc-------hhccCCChhHHHHHHHH
Q 013242 258 ---NHICGMIGNGVNDAPALKK-ADIGIAVADATDAARSAAD-------IVLTEPGLNVIITAVLI 312 (447)
Q Consensus 258 ---g~~v~~iGDg~ND~~al~~-A~vGIa~~~a~~~a~~aAD-------~vl~~~~~~~i~~~i~~ 312 (447)
...|+++||+.||++|++. ++.||+|+|+.+.++..++ ++....+-+|+.+++..
T Consensus 180 ~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~ 245 (249)
T TIGR01485 180 AMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIAH 245 (249)
T ss_pred CCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHH
Confidence 3469999999999999998 6799999999999987654 66666778888887753
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.55 E-value=4.5e-07 Score=85.30 Aligned_cols=132 Identities=21% Similarity=0.286 Sum_probs=84.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC-CCCCcccccCCcchhhhhcCChhHHHhhccchhccCh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT-NMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 244 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p 244 (447)
++.|++.++++.|++.|+++.++||.....+..+.+.+|+.. +.+........+ ........ ......+
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~--g~~~g~~~--------~~~~~~~ 153 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDS--GEYAGFDE--------NEPTSRS 153 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCC--CcEECccC--------CCcccCC
Confidence 378999999999999999999999999999999999999963 221110010000 00000000 0000112
Q ss_pred hhHHHHHHHHhhc--CCEEEEEcCCCCchhHHhh--cCeeEEecCc--hHHHHhhcchhccCCChhHHHHH
Q 013242 245 EHKYEIVKHLQAR--NHICGMIGNGVNDAPALKK--ADIGIAVADA--TDAARSAADIVLTEPGLNVIITA 309 (447)
Q Consensus 245 ~~K~~iV~~lq~~--g~~v~~iGDg~ND~~al~~--A~vGIa~~~a--~~~a~~aAD~vl~~~~~~~i~~~ 309 (447)
..|.+.++.+..+ ...++|+||+.||+.|.+. ++++++.+.. .+.....+|+++.+ +..+...
T Consensus 154 ~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~el~~~ 222 (224)
T PLN02954 154 GGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTD--FQDLIEV 222 (224)
T ss_pred ccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECC--HHHHHHh
Confidence 3477777776654 3579999999999999888 4555655532 23345568988854 6665543
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.2e-07 Score=86.71 Aligned_cols=92 Identities=24% Similarity=0.289 Sum_probs=67.9
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh---
Q 013242 169 HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE--- 245 (447)
Q Consensus 169 ~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~--- 245 (447)
+++.+.|+.++++|++++|+||+....+..+++.+|++........+.... ......++++.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~~---------------~~~~~~~~~~~~~~ 156 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDNG---------------GGIFTGRITGSNCG 156 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECTT---------------CCEEEEEEEEEEES
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeecc---------------cceeeeeECCCCCC
Confidence 788899999999999999999999999999999999974211111111000 00112333433
Q ss_pred hHHHHHHHH------hhcCCEEEEEcCCCCchhHHh
Q 013242 246 HKYEIVKHL------QARNHICGMIGNGVNDAPALK 275 (447)
Q Consensus 246 ~K~~iV~~l------q~~g~~v~~iGDg~ND~~al~ 275 (447)
.|...++.+ +.....++++|||.||+||||
T Consensus 157 ~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 499999999 445789999999999999986
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.51 E-value=3.9e-07 Score=93.62 Aligned_cols=146 Identities=19% Similarity=0.128 Sum_probs=93.3
Q ss_pred CCcchHHHH-HHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC----Ccc-cccCCcc----------------h---
Q 013242 167 PIHDSAETI-RRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY----PSS-ALSGQDR----------------D--- 221 (447)
Q Consensus 167 ~r~~~~~~I-~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~----~~~-~~~~~~~----------------~--- 221 (447)
+.+...+++ +++++.|+.++++||+++.....+.+.+++..+.+ +.. +..+... .
T Consensus 29 ~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~ 108 (413)
T PLN02382 29 LSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVV 108 (413)
T ss_pred hhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHH
Confidence 333345555 88999999999999999999999999998865421 000 0000000 0
Q ss_pred hhhhcC-----------------------ChhH----HHhh-------cc------chhccChh--hHHHHHHHHhhc--
Q 013242 222 ESIVAL-----------------------PVDE----LIEK-------AD------GFAGVFPE--HKYEIVKHLQAR-- 257 (447)
Q Consensus 222 ~~~~~~-----------------------~~~~----~~~~-------~~------v~a~~~p~--~K~~iV~~lq~~-- 257 (447)
+..... ...+ +.+. +. .+.++.|. .|...++.|.++
T Consensus 109 ~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~ 188 (413)
T PLN02382 109 EETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLK 188 (413)
T ss_pred HHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhh
Confidence 000000 0001 1000 00 12234443 599988888765
Q ss_pred --C---CEEEEEcCCCCchhHHhhcC-eeEEecCchHHHHhhc--------chhc-cCCChhHHHHHHHH
Q 013242 258 --N---HICGMIGNGVNDAPALKKAD-IGIAVADATDAARSAA--------DIVL-TEPGLNVIITAVLI 312 (447)
Q Consensus 258 --g---~~v~~iGDg~ND~~al~~A~-vGIa~~~a~~~a~~aA--------D~vl-~~~~~~~i~~~i~~ 312 (447)
| ..|+++||+.||++||+.++ .||+|+|+.+.+++.+ ++++ .+++-+||.++|..
T Consensus 189 ~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~ 258 (413)
T PLN02382 189 AEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGH 258 (413)
T ss_pred hcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHH
Confidence 2 36999999999999999999 7999999999999754 3332 35678888888864
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.49 E-value=7.7e-07 Score=83.65 Aligned_cols=135 Identities=14% Similarity=0.046 Sum_probs=84.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC--cccccCCcchhhhhcCChhHHHhhccchhccC
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP--SSALSGQDRDESIVALPVDELIEKADGFAGVF 243 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 243 (447)
+++|++.+.|+.|++.|+++.++||.....+..+.+.+ +....+. ...+.+..... ..+..... . +....
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~---~kp~p~~~-~---~~~~~ 145 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITI---TWPHPCDE-H---CQNHC 145 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEE---eccCCccc-c---ccccC
Confidence 58999999999999999999999999999999999988 6432111 11111111100 00000000 0 00000
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHH--HhhcchhccCCChhHHHHHH
Q 013242 244 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAA--RSAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 244 p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a--~~aAD~vl~~~~~~~i~~~i 310 (447)
...|..+++.++.....|+|||||.||++|.+.||+.++-+.-.+.+ +..+.+.+ .+|..|...+
T Consensus 146 ~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 146 GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARDFLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHHHHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 13478899988887778999999999999999999977732111111 12233333 4466666554
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=98.43 E-value=6.1e-07 Score=82.95 Aligned_cols=107 Identities=16% Similarity=0.129 Sum_probs=76.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccch-hccC
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF-AGVF 243 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-a~~~ 243 (447)
.++++++.+.|+.+++.|++++++||.....+..+++.+|+..- +........+ ...... +. -.+.
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~-~~~~l~~~~~--g~~~g~----------~~~~~~~ 152 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNA-IGTRLEESED--GIYTGN----------IDGNNCK 152 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcce-EecceEEcCC--CEEeCC----------ccCCCCC
Confidence 35889999999999999999999999999999999999999531 1111110000 000000 00 1234
Q ss_pred hhhHHHHHHHHhhc-C---CEEEEEcCCCCchhHHhhcCeeEEec
Q 013242 244 PEHKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVA 284 (447)
Q Consensus 244 p~~K~~iV~~lq~~-g---~~v~~iGDg~ND~~al~~A~vGIa~~ 284 (447)
++.|...++.+.++ + ..++++||+.+|.+|++.|+.++++.
T Consensus 153 g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 153 GEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred ChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 56788877766543 3 36899999999999999999999985
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.42 E-value=4.6e-07 Score=81.75 Aligned_cols=100 Identities=19% Similarity=0.218 Sum_probs=69.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhh
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 246 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~ 246 (447)
++|++.+.++.+++.|++++++||.....+..+++.+|+..-..+........ .+... . ..-....+..
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g---~~~g~----~----~~~~~~~~~~ 142 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNG---LLTGP----I----EGQVNPEGEC 142 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCC---EEeCc----c----CCcccCCcch
Confidence 68999999999999999999999999999999999999863111111110000 00000 0 0001244578
Q ss_pred HHHHHHHHhhc----CCEEEEEcCCCCchhHHhhc
Q 013242 247 KYEIVKHLQAR----NHICGMIGNGVNDAPALKKA 277 (447)
Q Consensus 247 K~~iV~~lq~~----g~~v~~iGDg~ND~~al~~A 277 (447)
|..+++.+.++ ...++++|||.||++|++.|
T Consensus 143 K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 143 KGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 99888887654 34599999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.39 E-value=1.1e-06 Score=80.01 Aligned_cols=111 Identities=17% Similarity=0.126 Sum_probs=75.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcc---hhhhhcCChhHHHhhccchhc
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDR---DESIVALPVDELIEKADGFAG 241 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~v~a~ 241 (447)
-++.+++.+.++.|++.|+++.++|+........+.+..|+.... . .++..... +...... ..++..+..
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-~-~i~~~~~~~~~~g~~~~~-----~~~~~~~~~ 143 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF-I-EIYSNPASFDNDGRHIVW-----PHHCHGCCS 143 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe-e-EEeccCceECCCCcEEEe-----cCCCCccCc
Confidence 368899999999999999999999999999999999999985321 0 11111000 0000000 001111111
Q ss_pred -cChhhHHHHHHHHhhc-CCEEEEEcCCCCchhHHhhcCeeEE
Q 013242 242 -VFPEHKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIGIA 282 (447)
Q Consensus 242 -~~p~~K~~iV~~lq~~-g~~v~~iGDg~ND~~al~~A~vGIa 282 (447)
.....|..+++.++.+ ...++++|||.||+.|.+.||+-.|
T Consensus 144 ~~~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 144 CPCGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 1223589999999887 8899999999999999999987544
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.37 E-value=2.8e-06 Score=79.76 Aligned_cols=126 Identities=16% Similarity=0.198 Sum_probs=88.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccC-
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF- 243 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~- 243 (447)
.++.|++.+.++.|++.|+++.++||........+.+.+|+.... ..++.+.. +....
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~-------------------~~~~kp 150 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF--SVVIGGDS-------------------LPNKKP 150 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc--cEEEcCCC-------------------CCCCCc
Confidence 358899999999999999999999999999999999999985321 11111100 11112
Q ss_pred -hhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCe-eEEecC----chHHHHhhcchhccCCChhHHHHHHHHH
Q 013242 244 -PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVAD----ATDAARSAADIVLTEPGLNVIITAVLIS 313 (447)
Q Consensus 244 -p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~v-GIa~~~----a~~~a~~aAD~vl~~~~~~~i~~~i~~~ 313 (447)
|+--..+++.++.....++++||+.||+.+.+.||+ +|.+.. ..+.....+|+++ +++..+...+.++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~~ 224 (226)
T PRK13222 151 DPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGLA 224 (226)
T ss_pred ChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHHh
Confidence 222244555565556789999999999999999999 555532 2344455688887 6688888777543
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.7e-06 Score=81.74 Aligned_cols=44 Identities=14% Similarity=0.140 Sum_probs=39.5
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC
Q 013242 164 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 207 (447)
Q Consensus 164 ~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~ 207 (447)
.+..-+.+.++|++|++.|++++++||+....+..+.+++|+..
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 45566789999999999999999999999999999999999853
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.33 E-value=3.5e-06 Score=79.30 Aligned_cols=126 Identities=19% Similarity=0.221 Sum_probs=91.3
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccC
Q 013242 164 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 243 (447)
Q Consensus 164 ~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 243 (447)
...+-|++++++..|+++|++..++|++....+..+.+.+|+..-. ..+.|.+. .....-.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F---~~i~g~~~----------------~~~~KP~ 147 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYF---DVIVGGDD----------------VPPPKPD 147 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcccc---ceEEcCCC----------------CCCCCcC
Confidence 4468899999999999999999999999999999999999996321 01111000 0012224
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcC---eeEEecC--chHHHHhhcchhccCCChhHHHHHH
Q 013242 244 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKAD---IGIAVAD--ATDAARSAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 244 p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~---vGIa~~~--a~~~a~~aAD~vl~~~~~~~i~~~i 310 (447)
|.....+++.+......++||||..+|+.|-+.|+ +|+..|. ........+|+++.+ +..+...+
T Consensus 148 P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~--~~el~~~l 217 (220)
T COG0546 148 PEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDS--LAELLALL 217 (220)
T ss_pred HHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECC--HHHHHHHH
Confidence 55555666666655457999999999999999999 6677763 455666679999844 77766554
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.32 E-value=2.7e-06 Score=82.45 Aligned_cols=140 Identities=11% Similarity=0.134 Sum_probs=86.6
Q ss_pred CCCcchHHHHHHHHh-CCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCccccc---CC----cch------------hhh-
Q 013242 166 PPIHDSAETIRRALS-LGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALS---GQ----DRD------------ESI- 224 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~-~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~---~~----~~~------------~~~- 224 (447)
.+.++++++|++|++ .|+.++++||+....+..+.+.+++.--..+...+. +. ... +..
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 466899999999998 799999999999999988887766420000000000 00 000 000
Q ss_pred ------------------hcCC-hh----HH----Hhhcc--------chhccCh--hhHHHHHHHHhhc----CCEEEE
Q 013242 225 ------------------VALP-VD----EL----IEKAD--------GFAGVFP--EHKYEIVKHLQAR----NHICGM 263 (447)
Q Consensus 225 ------------------~~~~-~~----~~----~~~~~--------v~a~~~p--~~K~~iV~~lq~~----g~~v~~ 263 (447)
...+ .. .+ ..... .+.++.| .+|...++.+.+. ...+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 0000 00 01 00000 1223334 3688888876654 357999
Q ss_pred EcCCCCchhHHhhc----CeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 013242 264 IGNGVNDAPALKKA----DIGIAVADATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 264 iGDg~ND~~al~~A----~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
+||+.||.+||+.+ ++||+||++. ..|++.+. +...+...+.
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~----~~A~~~l~--~~~~v~~~L~ 241 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGA----TQASWRLA--GVPDVWSWLE 241 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCC----CcCeEeCC--CHHHHHHHHH
Confidence 99999999999999 9999999875 44777775 4666655543
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=98.27 E-value=5.3e-06 Score=76.95 Aligned_cols=124 Identities=16% Similarity=0.194 Sum_probs=84.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++|+.|++.|+++.++||.....+....+.+|+..-. . .++...+. ....-.|+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f-~-~i~~~~~~-----------------~~~KP~~~ 135 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF-D-HVIGSDEV-----------------PRPKPAPD 135 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe-e-eEEecCcC-----------------CCCCCChH
Confidence 67899999999999999999999999999999999999985210 0 01100000 01111232
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEE-e--c--CchHHHHhhcchhccCCChhHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-V--A--DATDAARSAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa-~--~--~a~~~a~~aAD~vl~~~~~~~i~~~i 310 (447)
--..+++.++-....++||||+.+|+.+-+.+|+... + | +..+..+..+|+++ +++..+..++
T Consensus 136 ~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 136 IVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred HHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 2344555555556779999999999999999998633 2 3 23344566789887 4466665544
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.26 E-value=4.1e-06 Score=78.62 Aligned_cols=40 Identities=20% Similarity=0.205 Sum_probs=36.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 206 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~ 206 (447)
+.+.++++|+.|++.|++++++||+....+..+.+.+|+.
T Consensus 17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 17 DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 3344899999999999999999999999999999999986
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=98.23 E-value=5e-06 Score=70.48 Aligned_cols=118 Identities=15% Similarity=0.070 Sum_probs=74.0
Q ss_pred cCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhc
Q 013242 162 PLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 241 (447)
Q Consensus 162 ~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~ 241 (447)
....++.+++.+.|++|++.|++++++||.....+....+.+|+... ...++............ ..........+..
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~ 96 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDY--FDPVITSNGAAIYYPKE-GLFLGGGPFDIGK 96 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchh--hhheeccchhhhhcccc-cccccccccccCC
Confidence 34458899999999999999999999999999999999999988411 01111100000000000 0000000011223
Q ss_pred cChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhc-CeeEE
Q 013242 242 VFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKA-DIGIA 282 (447)
Q Consensus 242 ~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A-~vGIa 282 (447)
-.|+.+..+.+.+......++++||+.||+.|++.+ .-+|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 97 PNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 345555566666665567899999999999999994 44443
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.14 E-value=1.6e-05 Score=74.29 Aligned_cols=103 Identities=13% Similarity=0.024 Sum_probs=74.4
Q ss_pred CCCcchHHHH-HHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC--CCCCCcccccCCcchhhhhcCChhHHHhhccc-hhc
Q 013242 166 PPIHDSAETI-RRALSLGLGVKMITGDQLAIAKETGRRLGMG--TNMYPSSALSGQDRDESIVALPVDELIEKADG-FAG 241 (447)
Q Consensus 166 ~~r~~~~~~I-~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~a~ 241 (447)
.+.|++.++| +.+++.|++++++|+.....+..+++.+|+. .+.+ +...+..+.. .+ =..
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i------~t~l~~~~tg----------~~~g~~ 158 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVNLI------ASQMQRRYGG----------WVLTLR 158 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCceE------EEEEEEEEcc----------EECCcc
Confidence 3589999999 5788899999999999999999999999962 1211 1111100000 00 123
Q ss_pred cChhhHHHHHHHH-hhcCCEEEEEcCCCCchhHHhhcCeeEEec
Q 013242 242 VFPEHKYEIVKHL-QARNHICGMIGNGVNDAPALKKADIGIAVA 284 (447)
Q Consensus 242 ~~p~~K~~iV~~l-q~~g~~v~~iGDg~ND~~al~~A~vGIa~~ 284 (447)
|..+.|..-++.+ ......+.+-||+.||.|||+.|+.+++++
T Consensus 159 c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 159 CLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred CCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 5668888877654 444556778999999999999999999994
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.11 E-value=1.6e-05 Score=83.14 Aligned_cols=100 Identities=17% Similarity=0.196 Sum_probs=74.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
|++|++.+.|+++++.|++++++|+-+...+..+++.+|+.+.. +.+ +. ...+.|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~V-----igs-d~------------------~~~~kg~ 127 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDGV-----FAS-DG------------------TTNLKGA 127 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCEE-----EeC-CC------------------ccccCCc
Confidence 47899999999999999999999999999999999999973211 111 00 1234566
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAA 290 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a 290 (447)
.|.+.+...... +.+.++||+.||.+|++.|+-.++++......
T Consensus 128 ~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~ 171 (479)
T PRK08238 128 AKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVGASPGVA 171 (479)
T ss_pred hHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEECCCHHHH
Confidence 676655432222 22678999999999999999999997554433
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=98.10 E-value=1.6e-05 Score=74.18 Aligned_cols=123 Identities=17% Similarity=0.178 Sum_probs=82.2
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhh
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 246 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~ 246 (447)
+.|++.++++.|++.|+++.++||.....+..+.+.+|+..-. ..++...+.. ...-.|+-
T Consensus 83 ~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~-----------------~~Kp~p~~ 143 (214)
T PRK13288 83 EYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF--DVVITLDDVE-----------------HAKPDPEP 143 (214)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce--eEEEecCcCC-----------------CCCCCcHH
Confidence 7799999999999999999999999999999999999985311 1111110000 01122333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee---EEecC-chH-HHHhhcchhccCCChhHHHHHH
Q 013242 247 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIG---IAVAD-ATD-AARSAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 247 K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG---Ia~~~-a~~-~a~~aAD~vl~~~~~~~i~~~i 310 (447)
-..+++.++.....+++|||+.+|+.+-+.||+- +..+. ..+ .....+|+++ +++..+...+
T Consensus 144 ~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 144 VLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 3345555554556799999999999999999985 33332 222 3344588877 4577766544
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.06 E-value=2.3e-05 Score=76.29 Aligned_cols=126 Identities=13% Similarity=0.160 Sum_probs=82.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccCh
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 244 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p 244 (447)
.++.|++.++|+.|++.|+++.++||.....+..+...+|+.... ..++.+.... ...-.|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f--~~i~~~d~~~-----------------~~Kp~p 160 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF--RWIIGGDTLP-----------------QKKPDP 160 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC--eEEEecCCCC-----------------CCCCCc
Confidence 368899999999999999999999999999888888888884210 0011110000 001111
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee-EEecC----chHHHHhhcchhccCCChhHHHHHHH
Q 013242 245 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVAD----ATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 245 ~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG-Ia~~~----a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
+--..+++.+.-....|+||||+.||+.|.+.||+. +++.. ..+.....+|+++ +++..+..++.
T Consensus 161 ~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~~ 230 (272)
T PRK13223 161 AALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGCA 230 (272)
T ss_pred HHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHHh
Confidence 112234444444456799999999999999999973 44432 2333445788888 45777665433
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=98.04 E-value=2.3e-05 Score=72.81 Aligned_cols=122 Identities=15% Similarity=0.158 Sum_probs=80.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.+.. ...-.|+
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~p~ 145 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF--SVLIGGDSLA-----------------QRKPHPD 145 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC--cEEEecCCCC-----------------CCCCChH
Confidence 57899999999999999999999999999999999999985211 1111110000 0111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEE-e--cCc--hHHHHhhcchhccCCChhHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-V--ADA--TDAARSAADIVLTEPGLNVIIT 308 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa-~--~~a--~~~a~~aAD~vl~~~~~~~i~~ 308 (447)
-=..+.+.++.....+++|||+.+|+.+.+.||+... + |.. .......+|+++. ++..+..
T Consensus 146 ~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~--~~~~l~~ 211 (213)
T TIGR01449 146 PLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYD--SLNELPP 211 (213)
T ss_pred HHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeC--CHHHHHh
Confidence 2234444554445679999999999999999998754 3 211 2223346888774 4655543
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.02 E-value=3.4e-05 Score=74.68 Aligned_cols=43 Identities=7% Similarity=-0.017 Sum_probs=39.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 207 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~ 207 (447)
+...+.+.++|++|++.||.|+++||+.......+.+++|+..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 3466779999999999999999999999999999999999864
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.97 E-value=4.1e-05 Score=71.92 Aligned_cols=122 Identities=16% Similarity=0.217 Sum_probs=78.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccCh
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 244 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p 244 (447)
-++.|++.++|+.|++.|+++.++|+........+.+.+|+..-. ..++.+... ....-.|
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~ 151 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF--DALASAEKL-----------------PYSKPHP 151 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc--cEEEEcccC-----------------CCCCCCH
Confidence 357899999999999999999999999999999999999985321 111111000 0111122
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEe-cCc---hHHHHhhcchhccCCChhHHH
Q 013242 245 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV-ADA---TDAARSAADIVLTEPGLNVII 307 (447)
Q Consensus 245 ~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~-~~a---~~~a~~aAD~vl~~~~~~~i~ 307 (447)
+-=..+.+.++-....|++|||+.||+.+-+.||+.... ... .+.-...+|+++.+ +..+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~--~~dl~ 216 (222)
T PRK10826 152 EVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLES--LTELT 216 (222)
T ss_pred HHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccC--HHHHh
Confidence 211223333333345699999999999999999987544 221 11223357777643 55543
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.95 E-value=5.6e-05 Score=70.79 Aligned_cols=125 Identities=18% Similarity=0.170 Sum_probs=80.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC-CCCCcccccCCcchhhhhcCChhHHHhhccchhccC
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT-NMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 243 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 243 (447)
.++.||+.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.. ..++...+.. ..+-.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f-~~i~~~~~~~-----------------~~KP~ 147 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDV-DAVVCPSDVA-----------------AGRPA 147 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccC-CEEEcCCcCC-----------------CCCCC
Confidence 3689999999999999999999999999999999999999852 111 1111111100 01112
Q ss_pred hhhHHHHHHHHhhc-CCEEEEEcCCCCchhHHhhcCeeE--EecC---chH-HHHhhcchhccCCChhHHHHH
Q 013242 244 PEHKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIGI--AVAD---ATD-AARSAADIVLTEPGLNVIITA 309 (447)
Q Consensus 244 p~~K~~iV~~lq~~-g~~v~~iGDg~ND~~al~~A~vGI--a~~~---a~~-~a~~aAD~vl~~~~~~~i~~~ 309 (447)
|+-=..+++.+.-. ...++||||+.+|+.+-+.||+.. ++.. ... .....+|+++ +++..+..+
T Consensus 148 p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~~ 218 (220)
T TIGR03351 148 PDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPAL 218 (220)
T ss_pred HHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHHh
Confidence 22222333444433 357999999999999999999986 3322 222 2234577777 346655443
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.95 E-value=4.6e-05 Score=71.20 Aligned_cols=106 Identities=11% Similarity=0.052 Sum_probs=73.3
Q ss_pred CCCcchHHHHH-HHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccCh
Q 013242 166 PPIHDSAETIR-RALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 244 (447)
Q Consensus 166 ~~r~~~~~~I~-~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p 244 (447)
.+.|++.++|+ .+++.|++++++|+-....+.++++..++.... .++ +...+.. .. ..+ .=..|..
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~---~~i-~t~le~~-~g---g~~-----~g~~c~g 160 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL---NLI-ASQIERG-NG---GWV-----LPLRCLG 160 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC---cEE-EEEeEEe-CC---ceE-----cCccCCC
Confidence 46899999996 788899999999999999999999986652210 000 1111000 00 000 0123566
Q ss_pred hhHHHHHHHH-hhcCCEEEEEcCCCCchhHHhhcCeeEEec
Q 013242 245 EHKYEIVKHL-QARNHICGMIGNGVNDAPALKKADIGIAVA 284 (447)
Q Consensus 245 ~~K~~iV~~l-q~~g~~v~~iGDg~ND~~al~~A~vGIa~~ 284 (447)
++|..-++.. ......+.+-||+.||.|||+.||.++++.
T Consensus 161 ~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 161 HEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred hHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 7888877644 333445678999999999999999999994
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.89 E-value=6.7e-05 Score=70.98 Aligned_cols=125 Identities=14% Similarity=0.126 Sum_probs=83.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+... ....-.|+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~p~ 155 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC--AVLIGGDTL-----------------AERKPHPL 155 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc--cEEEecCcC-----------------CCCCCCHH
Confidence 57899999999999999999999999998888888888885311 011111100 01122233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeE-Ee--cC--c-hHHHHhhcchhccCCChhHHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI-AV--AD--A-TDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGI-a~--~~--a-~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
--..+++.++-....++||||+.||+.|-+.||+.. ++ |. . .......+|+++. ++..+.+.+.
T Consensus 156 ~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~--~~~el~~~~~ 225 (229)
T PRK13226 156 PLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVE--QPQLLWNPAT 225 (229)
T ss_pred HHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeC--CHHHHHHHhc
Confidence 334556666666678999999999999999999873 33 21 1 1223446888884 4666655443
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00016 Score=70.13 Aligned_cols=97 Identities=13% Similarity=0.060 Sum_probs=65.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++-|++.++|+.|++.|+++.++||.....+..+.+.+|+..-.. ..++.+.+.. ...-.|+
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~-d~i~~~~~~~-----------------~~KP~p~ 162 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP-DHVVTTDDVP-----------------AGRPYPW 162 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc-eEEEcCCcCC-----------------CCCCChH
Confidence 467999999999999999999999999998888888877642111 1111111100 1111222
Q ss_pred hHHHHHHHHhhc-CCEEEEEcCCCCchhHHhhcCee
Q 013242 246 HKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIG 280 (447)
Q Consensus 246 ~K~~iV~~lq~~-g~~v~~iGDg~ND~~al~~A~vG 280 (447)
-=..+++.+.-. ...++||||+.+|+.+-+.||+-
T Consensus 163 ~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~ 198 (267)
T PRK13478 163 MALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMW 198 (267)
T ss_pred HHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCE
Confidence 223344444433 35799999999999999999973
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.87 E-value=4.3e-05 Score=81.67 Aligned_cols=40 Identities=10% Similarity=0.133 Sum_probs=37.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 206 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~ 206 (447)
+-+.+.++|++|+++|+.++++||+....+..+.+++|+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 4567899999999999999999999999999999999974
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00014 Score=69.76 Aligned_cols=97 Identities=15% Similarity=0.114 Sum_probs=67.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++|+.|++.|+++.++||.....+..+.+.+|+..-.. ..++.+.+.. ...-.|+
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~-d~ii~~~~~~-----------------~~KP~p~ 160 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP-DYNVTTDDVP-----------------AGRPAPW 160 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC-ceEEccccCC-----------------CCCCCHH
Confidence 367999999999999999999999999999999999999853211 1111111100 1111232
Q ss_pred hHHHHHHHHhhc-CCEEEEEcCCCCchhHHhhcCee
Q 013242 246 HKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIG 280 (447)
Q Consensus 246 ~K~~iV~~lq~~-g~~v~~iGDg~ND~~al~~A~vG 280 (447)
-=..+++.+.-. ...++||||+.+|+.+-+.||+-
T Consensus 161 ~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 161 MALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred HHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 223344444432 45699999999999999999975
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.80 E-value=6.6e-05 Score=69.49 Aligned_cols=39 Identities=28% Similarity=0.342 Sum_probs=35.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhC
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLG 204 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lG 204 (447)
++.+.+.++|++|++.|++++++||+....+..+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 477999999999999999999999999999999988754
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00026 Score=68.49 Aligned_cols=134 Identities=10% Similarity=0.046 Sum_probs=82.5
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC----cccccCCcchhhhhcCChhHHHhhccchh
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP----SSALSGQDRDESIVALPVDELIEKADGFA 240 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 240 (447)
-+++|++.+.++.|++.|+++.++||.....+..+.+++|+...... ...+.... .....+ +.
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dG---vltG~~-~P--------- 186 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDG---VLKGFK-GP--------- 186 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCC---eEeCCC-CC---------
Confidence 46899999999999999999999999999999999999998532110 00010000 000000 00
Q ss_pred ccChhhHHHHHH-----HHh--hcCCEEEEEcCCCCchhHHhhc---CeeEEec--Cc-----hHHHHhhcchhccCCCh
Q 013242 241 GVFPEHKYEIVK-----HLQ--ARNHICGMIGNGVNDAPALKKA---DIGIAVA--DA-----TDAARSAADIVLTEPGL 303 (447)
Q Consensus 241 ~~~p~~K~~iV~-----~lq--~~g~~v~~iGDg~ND~~al~~A---~vGIa~~--~a-----~~~a~~aAD~vl~~~~~ 303 (447)
-+....|.+.+. .++ .....|+++|||.||++|..-. .--+.+| |. -+.-.++=|+|+.++.-
T Consensus 187 ~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~t 266 (277)
T TIGR01544 187 LIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDET 266 (277)
T ss_pred cccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCCC
Confidence 001123444332 233 2345799999999999996554 2234444 32 23345788999998765
Q ss_pred hHHHHHHH
Q 013242 304 NVIITAVL 311 (447)
Q Consensus 304 ~~i~~~i~ 311 (447)
-.++..|.
T Consensus 267 ~~v~~~il 274 (277)
T TIGR01544 267 LEVANSIL 274 (277)
T ss_pred chHHHHHH
Confidence 55554443
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00011 Score=81.20 Aligned_cols=61 Identities=18% Similarity=0.183 Sum_probs=47.7
Q ss_pred hhHHHHHHHHhhc--CCEEEEEcCCCCchhHHhhc---CeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 013242 245 EHKYEIVKHLQAR--NHICGMIGNGVNDAPALKKA---DIGIAVADATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 245 ~~K~~iV~~lq~~--g~~v~~iGDg~ND~~al~~A---~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
-+|...++.+.+. ...++++||+.||.+||+.+ +++|+||++ +.+|++++.++ ..+...+.
T Consensus 656 vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~s~A~~~l~~~--~eV~~~L~ 721 (726)
T PRK14501 656 VNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----ESRARYRLPSQ--REVRELLR 721 (726)
T ss_pred CCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----CCcceEeCCCH--HHHHHHHH
Confidence 3699999888764 34799999999999999996 688899885 46788999754 45555554
|
|
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00022 Score=74.59 Aligned_cols=176 Identities=20% Similarity=0.223 Sum_probs=119.5
Q ss_pred CCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC-----------Ccccc------
Q 013242 153 SPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY-----------PSSAL------ 215 (447)
Q Consensus 153 ~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~-----------~~~~~------ 215 (447)
.+-.|+|++.+.-+++++....|+.|-++-|+.+..|-.+....+-+|+++||..... |....
T Consensus 813 sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q 892 (1354)
T KOG4383|consen 813 SGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQ 892 (1354)
T ss_pred ccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChh
Confidence 4468999999999999999999999999999999999999999999999999964211 10000
Q ss_pred -cC-------------------Ccchh------hhhcCC------------------------------hhHHHhhccch
Q 013242 216 -SG-------------------QDRDE------SIVALP------------------------------VDELIEKADGF 239 (447)
Q Consensus 216 -~~-------------------~~~~~------~~~~~~------------------------------~~~~~~~~~v~ 239 (447)
.+ ...+. .+.-.+ .|.+-.-...|
T Consensus 893 ~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LF 972 (1354)
T KOG4383|consen 893 FAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLF 972 (1354)
T ss_pred hhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeec
Confidence 00 00000 000000 00010111248
Q ss_pred hccChhhHHHHHHHHhhcCCEEEEEcCCCCc--hhHHhhcCeeEEecCc-------------hHH-HHhhcc--------
Q 013242 240 AGVFPEHKYEIVKHLQARNHICGMIGNGVND--APALKKADIGIAVADA-------------TDA-ARSAAD-------- 295 (447)
Q Consensus 240 a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND--~~al~~A~vGIa~~~a-------------~~~-a~~aAD-------- 295 (447)
..++|+.--+.|+.+|+.|.+|+++|...|- ...+-+||++||+..- +.. ...+.|
T Consensus 973 TDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiS 1052 (1354)
T KOG4383|consen 973 TDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQIS 1052 (1354)
T ss_pred cCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeec
Confidence 8999999999999999999999999998885 3456889999998521 111 011222
Q ss_pred ---------hhccCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 013242 296 ---------IVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI 328 (447)
Q Consensus 296 ---------~vl~~~~~~~i~~~i~~~r~~~~~i~~~~~~~~ 328 (447)
+-+....+-.+.++|.-+|-...-+|..++|.+
T Consensus 1053 gqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiL 1094 (1354)
T KOG4383|consen 1053 GQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFIL 1094 (1354)
T ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 222222344566778888888888888888887
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00025 Score=68.99 Aligned_cols=121 Identities=12% Similarity=0.104 Sum_probs=80.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+.... . .++.+.. +. ..|+
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F-~-~vi~~~~------------------~~--~k~~ 199 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLF-S-VVQAGTP------------------IL--SKRR 199 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhhe-E-EEEecCC------------------CC--CCHH
Confidence 57899999999999999999999999999999999999985321 0 1111100 00 0111
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEE-e--cC-chH-HHHhhcchhccCCChhHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-V--AD-ATD-AARSAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa-~--~~-a~~-~a~~aAD~vl~~~~~~~i~~~i 310 (447)
-=..+++.++-....++||||+.+|+.+-+.||+-.. + +. ..+ .....+|+++ +++..|...+
T Consensus 200 ~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 200 ALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred HHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 1122233333344579999999999999999998643 2 21 222 2344689888 4477776654
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00026 Score=68.38 Aligned_cols=120 Identities=18% Similarity=0.109 Sum_probs=79.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++|+.|++.|+++.++|+.....+..+.+.+|+..- -..++.+.+.. ...-.|+
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~--Fd~ii~~~d~~-----------------~~KP~Pe 169 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGF--FSVVLAAEDVY-----------------RGKPDPE 169 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhh--CcEEEecccCC-----------------CCCCCHH
Confidence 4689999999999999999999999999999999999998531 11111111110 0111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeE-Eec-CchHHHHhhcchhccCCChhHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI-AVA-DATDAARSAADIVLTEPGLNVI 306 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGI-a~~-~a~~~a~~aAD~vl~~~~~~~i 306 (447)
-=..+++.++-....++||||..+|+.+-+.||+-. ++. .........+|+++.+ ++.+
T Consensus 170 ~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~--~~el 230 (260)
T PLN03243 170 MFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRR--LDDL 230 (260)
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCC--HHHH
Confidence 223445555555667999999999999999999853 443 2222223357877644 5544
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00036 Score=66.87 Aligned_cols=117 Identities=12% Similarity=0.150 Sum_probs=79.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++++.|++.|+++.++|+.....+....+.+|+..-. ..++.+.+.. ...-.|+
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~iv~~~~~~-----------------~~KP~p~ 168 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFF--QAVIIGSECE-----------------HAKPHPD 168 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhC--cEEEecCcCC-----------------CCCCChH
Confidence 47899999999999999999999999999999999999985211 1111111110 1112233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEE-ec--CchH-HHHhhcchhccCC
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-VA--DATD-AARSAADIVLTEP 301 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa-~~--~a~~-~a~~aAD~vl~~~ 301 (447)
--..+++.++.....++||||+.+|+.+-+.||+-.. +. ...+ .....+|+++.+.
T Consensus 169 ~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~ 228 (248)
T PLN02770 169 PYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDY 228 (248)
T ss_pred HHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccc
Confidence 3344555555556679999999999999999998633 32 2222 2234688888553
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00025 Score=74.28 Aligned_cols=124 Identities=11% Similarity=0.066 Sum_probs=81.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+.|+.|++.|+++.++|+.....+..+.+.+|+..-. ..++.+++.. ..-.|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f--~~i~~~d~v~------------------~~~kP~ 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV--TETFSIEQIN------------------SLNKSD 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc--ceeEecCCCC------------------CCCCcH
Confidence 68899999999999999999999999999999999999985311 1111111100 001122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee-EEec--CchHHHHhhcchhccCCChhHHHHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVA--DATDAARSAADIVLTEPGLNVIITAVLIS 313 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG-Ia~~--~a~~~a~~aAD~vl~~~~~~~i~~~i~~~ 313 (447)
--..+++.+ ....+++|||+.+|+.+-+.||+- |++. ...+.....+|+++ +++..+...+...
T Consensus 390 ~~~~al~~l--~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~~ 456 (459)
T PRK06698 390 LVKSILNKY--DIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILSTV 456 (459)
T ss_pred HHHHHHHhc--CcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHHH
Confidence 112222222 235799999999999999999984 4443 22222234578887 4577777766543
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00015 Score=69.61 Aligned_cols=67 Identities=19% Similarity=0.206 Sum_probs=47.8
Q ss_pred hhHHHHHHHHhhc-C---CEEEEEcCCCCchhHHhhcCeeEEecCchHH-----HHhhc---c-hhccCCChhHHHHHHH
Q 013242 245 EHKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDA-----ARSAA---D-IVLTEPGLNVIITAVL 311 (447)
Q Consensus 245 ~~K~~iV~~lq~~-g---~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~-----a~~aA---D-~vl~~~~~~~i~~~i~ 311 (447)
..|...|+.|+.+ + ..|+++||+.||.+||..+..||.++|+.+. ..... . ++...+.-.||.+++.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~ 243 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQ 243 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHH
Confidence 4699999999876 2 3588899999999999999999999998888 22222 1 3455566777777765
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00024 Score=65.49 Aligned_cols=93 Identities=19% Similarity=0.152 Sum_probs=65.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccCh
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 244 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p 244 (447)
+++.+.+.++|+.|++.|+++.++||.....+..+.+.+|+..-. ..++.+. .+...-.|
T Consensus 105 ~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~~~~~~------------------~~~~KP~p 164 (197)
T TIGR01548 105 DETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF--PVQIWME------------------DCPPKPNP 164 (197)
T ss_pred cccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC--CEEEeec------------------CCCCCcCH
Confidence 446677799999999999999999999999999999999985211 1111110 01112234
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhc
Q 013242 245 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKA 277 (447)
Q Consensus 245 ~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A 277 (447)
+--..+++.++.....|+||||+.+|+.+-+.|
T Consensus 165 ~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 165 EPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 444555666666667899999999999876654
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00069 Score=66.67 Aligned_cols=109 Identities=14% Similarity=0.075 Sum_probs=75.8
Q ss_pred cCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhc
Q 013242 162 PLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 241 (447)
Q Consensus 162 ~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~ 241 (447)
...+++.+++.++|+.|++.|++++++||+....+..+.+.+|+....+. .+.+.+.. ..++.. ..-.+
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~--~i~~~~~~--------~~~~~~-~~~~k 251 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFD--DLIGRPPD--------MHFQRE-QGDKR 251 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchh--hhhCCcch--------hhhccc-CCCCC
Confidence 35678999999999999999999999999999999999999988531110 11111100 000000 00123
Q ss_pred cChhhHHHHHHHHhh-cCCEEEEEcCCCCchhHHhhcCeeE
Q 013242 242 VFPEHKYEIVKHLQA-RNHICGMIGNGVNDAPALKKADIGI 281 (447)
Q Consensus 242 ~~p~~K~~iV~~lq~-~g~~v~~iGDg~ND~~al~~A~vGI 281 (447)
-.|+-+..+++.+.. ....++||||..+|+.+-+.||+..
T Consensus 252 p~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 252 PDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred CcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 345566677766544 3478999999999999999999873
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00068 Score=63.52 Aligned_cols=115 Identities=13% Similarity=0.137 Sum_probs=74.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++|+.|+++|+++.++|+.....+....+..|+.. . ..++.++.. ....-.|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~--~-~~i~~~~~~-----------------~~~KP~p~ 142 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA--P-EVFVTAERV-----------------KRGKPEPD 142 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC--c-cEEEEHHHh-----------------cCCCCCcH
Confidence 478999999999999999999999988777766667777731 1 111111000 01111233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee-EEecCch-HHHHhhcchhccC
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADAT-DAARSAADIVLTE 300 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG-Ia~~~a~-~~a~~aAD~vl~~ 300 (447)
--..+.+.+.-....++||||+.+|+.+-+.||+. |++..+. ......+|+++.+
T Consensus 143 ~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~ 199 (218)
T PRK11587 143 AYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHS 199 (218)
T ss_pred HHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEecc
Confidence 23344455555567899999999999999999985 5665332 2223356776643
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00048 Score=65.43 Aligned_cols=89 Identities=18% Similarity=0.202 Sum_probs=62.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCc----HHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhc
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQ----LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 241 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~----~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~ 241 (447)
.|.+++++.|+.+++.|+++.++||+. ..++..+.+.+|+....+-..++.++.
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~---------------------- 171 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDK---------------------- 171 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCC----------------------
Confidence 477889999999999999999999974 568888998899942211111221110
Q ss_pred cChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee
Q 013242 242 VFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 280 (447)
Q Consensus 242 ~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG 280 (447)
....+|...+ ++.+ .++|+||..+|+.+-+.||+-
T Consensus 172 ~~K~~K~~~l---~~~~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 172 PGQYTKTQWL---KKKN-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred CCCCCHHHHH---HhcC-CeEEEcCCHHHHHHHHHcCCc
Confidence 0113344433 3333 489999999999999999986
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00064 Score=64.13 Aligned_cols=101 Identities=11% Similarity=0.029 Sum_probs=67.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+.++.|++.|+++.++|+.....+....+.+|+..- . ..++.+.+.. ...-.|+
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~-f-d~iv~s~~~~-----------------~~KP~p~ 153 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAH-L-DLLLSTHTFG-----------------YPKEDQR 153 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHH-C-CEEEEeeeCC-----------------CCCCCHH
Confidence 5789999999999999999999999988888888888887421 0 0111110000 0011122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee--EEecC
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG--IAVAD 285 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG--Ia~~~ 285 (447)
-=..+.+.+.-....++||||+.+|+.+-+.||+. +++.+
T Consensus 154 ~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~ 195 (224)
T PRK14988 154 LWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTN 195 (224)
T ss_pred HHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeC
Confidence 12233344444456799999999999999999996 44554
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00041 Score=65.93 Aligned_cols=89 Identities=19% Similarity=0.188 Sum_probs=61.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC----cHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhc
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGD----QLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 241 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd----~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~ 241 (447)
.+.+++.+.|+.+++.|+++.++|+. ...++..+.+.+|+... . ..++.++... .
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~-f-~~i~~~d~~~-------------------~ 172 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAM-N-PVIFAGDKPG-------------------Q 172 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchh-e-eEEECCCCCC-------------------C
Confidence 35556999999999999999999998 66789999999999531 1 1111111100 0
Q ss_pred cChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee
Q 013242 242 VFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 280 (447)
Q Consensus 242 ~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG 280 (447)
-.| +|. ..+++.+ .++|+||..||+.+-+.|++-
T Consensus 173 ~Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 173 YQY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred CCC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 011 232 2344444 489999999999999999875
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0002 Score=68.58 Aligned_cols=60 Identities=25% Similarity=0.358 Sum_probs=50.5
Q ss_pred hhccCh--hhHHHHHHHHhhcCCEEEEEcC----CCCchhHHhhc-CeeEEecCchHHHHhhcchhc
Q 013242 239 FAGVFP--EHKYEIVKHLQARNHICGMIGN----GVNDAPALKKA-DIGIAVADATDAARSAADIVL 298 (447)
Q Consensus 239 ~a~~~p--~~K~~iV~~lq~~g~~v~~iGD----g~ND~~al~~A-~vGIa~~~a~~~a~~aAD~vl 298 (447)
+.++.| -+|+..++.|.++...|++||| |.||++||+.| -.|++++|+.+.++..+.+++
T Consensus 179 ~leI~~~gvsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 179 SFDVFPKGWDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred EEEeeeCCCcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 345555 4699999999888889999999 99999999976 577888899999998887665
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0003 Score=62.35 Aligned_cols=97 Identities=19% Similarity=0.233 Sum_probs=69.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+.++.|++.|++++++|+..........+++|+.. +...++...+.. ...-.|+
T Consensus 77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~--~f~~i~~~~~~~-----------------~~Kp~~~ 137 (176)
T PF13419_consen 77 QPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDD--YFDEIISSDDVG-----------------SRKPDPD 137 (176)
T ss_dssp EESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGG--GCSEEEEGGGSS-----------------SSTTSHH
T ss_pred chhhhhhhhhhhcccccceeEEeecCCccccccccccccccc--ccccccccchhh-----------------hhhhHHH
Confidence 578999999999999999999999999999999999999851 111111111000 1111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeE
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 281 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGI 281 (447)
-=..+++.++-....+++|||+..|+.+-+.||+--
T Consensus 138 ~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 138 AYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp HHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEE
T ss_pred HHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeE
Confidence 224455566556678999999999999999998753
|
... |
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00085 Score=61.70 Aligned_cols=98 Identities=16% Similarity=0.166 Sum_probs=67.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++|++|++.|+++.++|+.+......+.+.+|+... . ..++...+. ....-.|+
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~-f-d~i~~s~~~-----------------~~~KP~~~ 152 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDP-F-DAVLSADAV-----------------RAYKPAPQ 152 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhh-h-heeEehhhc-----------------CCCCCCHH
Confidence 4789999999999999999999999999888889999998421 0 011111000 00111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEE
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 282 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa 282 (447)
-=..+.+.+.-....+++|||+.+|+.+-+.||+-..
T Consensus 153 ~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i 189 (198)
T TIGR01428 153 VYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTA 189 (198)
T ss_pred HHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEE
Confidence 1233445555455679999999999999999998643
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0017 Score=65.79 Aligned_cols=120 Identities=18% Similarity=0.153 Sum_probs=80.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++|+.|++.|+++.++|+.....+..+.+.+||..-. ..++.+.+.. ...-.|+
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yF--d~Iv~sddv~-----------------~~KP~Pe 276 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFF--SVIVAAEDVY-----------------RGKPDPE 276 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHc--eEEEecCcCC-----------------CCCCCHH
Confidence 57799999999999999999999999999999999999985210 1111111000 0111233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeE-EecCchHHH-HhhcchhccCCChhHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI-AVADATDAA-RSAADIVLTEPGLNVI 306 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGI-a~~~a~~~a-~~aAD~vl~~~~~~~i 306 (447)
-=...++.++-....|+||||..+|+.+-+.|++-. ++..+.+.. ...||+++.+ +..+
T Consensus 277 ifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~s--~~EL 337 (381)
T PLN02575 277 MFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVRR--LDEL 337 (381)
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEECC--HHHH
Confidence 334455666656778999999999999999999863 333322222 2347877743 5554
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0007 Score=61.20 Aligned_cols=98 Identities=10% Similarity=0.044 Sum_probs=60.3
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHH--------HHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccc
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLA--------IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADG 238 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~--------~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 238 (447)
+.|++.++++.|++.|+++.++|+.... ......+.+|+..- +......+++. .
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~-~~~~~~~~~~~-----------------~ 90 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDI-YLCPHKHGDGC-----------------E 90 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEE-EECcCCCCCCC-----------------C
Confidence 6799999999999999999999987631 12333445555310 00000000000 0
Q ss_pred hhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEE
Q 013242 239 FAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 282 (447)
Q Consensus 239 ~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa 282 (447)
...-.|+-=..+++.+......++||||..+|+.+-+.|++-..
T Consensus 91 ~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 91 CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 11222333344555555555679999999999999999998644
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0018 Score=58.81 Aligned_cols=126 Identities=21% Similarity=0.142 Sum_probs=71.3
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcH---------------HHHHHHHHHhCCCCCCCCcccccCCcc-hhhhhcCChh
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQL---------------AIAKETGRRLGMGTNMYPSSALSGQDR-DESIVALPVD 230 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~---------------~~a~~ia~~lGi~~~~~~~~~~~~~~~-~~~~~~~~~~ 230 (447)
+.|++.++++.|++.|+++.++|+... .....+.+.+|+. +. .++..... .+.
T Consensus 30 ~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~---f~-~i~~~~~~~~~~------- 98 (181)
T PRK08942 30 PIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGR---LD-GIYYCPHHPEDG------- 98 (181)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCc---cc-eEEECCCCCCCC-------
Confidence 679999999999999999999998762 1112233444541 00 01100000 000
Q ss_pred HHHhhccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeE-EecCc--hH-HHHhhc--chhccCCChh
Q 013242 231 ELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI-AVADA--TD-AARSAA--DIVLTEPGLN 304 (447)
Q Consensus 231 ~~~~~~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGI-a~~~a--~~-~a~~aA--D~vl~~~~~~ 304 (447)
.....-.|+--..+++.+.-....++||||+.+|+.+-+.||+.. .+..+ .. .....+ |+++ +++.
T Consensus 99 ------~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~ 170 (181)
T PRK08942 99 ------CDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLA 170 (181)
T ss_pred ------CcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHH
Confidence 001112233334455555555678999999999999999999752 23222 11 112234 7776 4466
Q ss_pred HHHHHHH
Q 013242 305 VIITAVL 311 (447)
Q Consensus 305 ~i~~~i~ 311 (447)
.+...+.
T Consensus 171 el~~~l~ 177 (181)
T PRK08942 171 DLPQALK 177 (181)
T ss_pred HHHHHHH
Confidence 6665543
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0009 Score=62.51 Aligned_cols=100 Identities=16% Similarity=0.224 Sum_probs=67.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++|+.|++.|++++++|+..........+.+|+..-. ..++.+.+.. ...-.|+
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~~-----------------~~KP~~~ 154 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF--DAVITSEEEG-----------------VEKPHPK 154 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc--cEEEEeccCC-----------------CCCCCHH
Confidence 47899999999999999999999999988888888888884211 0111110000 0111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCC-CchhHHhhcCee-EEec
Q 013242 246 HKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIG-IAVA 284 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~-ND~~al~~A~vG-Ia~~ 284 (447)
-=..+.+.+......+++|||.. +|+.+-+.||+- |.+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 155 IFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 22334444544456799999998 999999999985 4454
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.001 Score=56.92 Aligned_cols=92 Identities=14% Similarity=0.147 Sum_probs=64.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCc--------HHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhcc
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQ--------LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 237 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~--------~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (447)
++.|++.++++.|++.|+++.++|+.. ......+.+.+|+.... ....+
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~-------------------- 81 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV---LYACP-------------------- 81 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE---EEECC--------------------
Confidence 578999999999999999999999998 77788888888874110 00000
Q ss_pred chhccChhhHHHHHHHHh-hcCCEEEEEcC-CCCchhHHhhcCee
Q 013242 238 GFAGVFPEHKYEIVKHLQ-ARNHICGMIGN-GVNDAPALKKADIG 280 (447)
Q Consensus 238 v~a~~~p~~K~~iV~~lq-~~g~~v~~iGD-g~ND~~al~~A~vG 280 (447)
.+..-.|+-=..+++.++ -....++|||| ..+|+.+-+.+|+-
T Consensus 82 ~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 82 HCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred CCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 001111222234455552 45567999999 69999999999874
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.003 Score=58.25 Aligned_cols=146 Identities=20% Similarity=0.283 Sum_probs=93.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCc-------ccccCCcchhhh------hcCChhHH
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPS-------SALSGQDRDESI------VALPVDEL 232 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~-------~~~~~~~~~~~~------~~~~~~~~ 232 (447)
.+-|++.++++.|+..= ..+++|-...+-+..+|..+|++...... ..+...+..+.+ ...+-+++
T Consensus 83 ~lvPgA~etm~~l~~~~-tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQERW-TPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhccC-CceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 36699999999998764 45566666778889999999996422111 111111111111 11122233
Q ss_pred Hhhc-cchhccChhh---------------HHHHHHHHhhc---CCEEEEEcCCCCchhHHhhcC-ee-EEec-CchHHH
Q 013242 233 IEKA-DGFAGVFPEH---------------KYEIVKHLQAR---NHICGMIGNGVNDAPALKKAD-IG-IAVA-DATDAA 290 (447)
Q Consensus 233 ~~~~-~v~a~~~p~~---------------K~~iV~~lq~~---g~~v~~iGDg~ND~~al~~A~-vG-Ia~~-~a~~~a 290 (447)
.++. .+|.+..|.. |+.+++.+... ....+++||++.|+.||+.+. -| +|++ |+.+-+
T Consensus 162 fe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeYa 241 (315)
T COG4030 162 FEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEYA 241 (315)
T ss_pred HHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCccc
Confidence 3332 2577777755 44444444432 223688999999999999873 33 7776 888888
Q ss_pred HhhcchhccCCChhHHHHHHHH
Q 013242 291 RSAADIVLTEPGLNVIITAVLI 312 (447)
Q Consensus 291 ~~aAD~vl~~~~~~~i~~~i~~ 312 (447)
...||+.+.+++..++...|..
T Consensus 242 l~eAdVAvisp~~~a~~pviel 263 (315)
T COG4030 242 LKEADVAVISPTAMAEAPVIEL 263 (315)
T ss_pred ccccceEEeccchhhhhHHHHH
Confidence 8889999999999998888875
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0016 Score=63.83 Aligned_cols=117 Identities=18% Similarity=0.133 Sum_probs=73.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCc-ccccCCcchhhhhcCChhHHHhhccchhccCh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPS-SALSGQDRDESIVALPVDELIEKADGFAGVFP 244 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p 244 (447)
++.|++.+.++.|++.|+++.++|+........+.+.++... .... ..+.+.+. ....-.|
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~-~~~~~~~v~~~~~-----------------~~~KP~p 205 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPE-RAQGLDVFAGDDV-----------------PKKKPDP 205 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcccc-ccCceEEEecccc-----------------CCCCCCH
Confidence 578999999999999999999999998888877766653211 0000 01111000 0111222
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEe-cCc--hHHHHhhcchhccC
Q 013242 245 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV-ADA--TDAARSAADIVLTE 300 (447)
Q Consensus 245 ~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~-~~a--~~~a~~aAD~vl~~ 300 (447)
+-=..+++.+.-....++||||+.+|+.+-+.||+.... ..+ .......+|+++.+
T Consensus 206 ~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~ 264 (286)
T PLN02779 206 DIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDC 264 (286)
T ss_pred HHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECC
Confidence 223445555555556799999999999999999987443 222 11112357887744
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.00092 Score=59.66 Aligned_cols=106 Identities=12% Similarity=0.006 Sum_probs=74.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhC----CCCCCCCc--ccccCCcchhhhhcCChhHHHhhccch
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLG----MGTNMYPS--SALSGQDRDESIVALPVDELIEKADGF 239 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lG----i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~ 239 (447)
.++|+-++.++.+++.+++++++|+.-.....++-++++ +....+.+ ..+...... .++-. .
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h---------~i~~~---~ 140 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQH---------SIKYT---D 140 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCce---------eeecC---C
Confidence 488999999999999999999999999888888888776 33211110 000000000 00000 0
Q ss_pred hccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEe
Q 013242 240 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 283 (447)
Q Consensus 240 a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~ 283 (447)
....-.+|...|+.+.+....+.|+|||+.|++|-+.+|+=.|-
T Consensus 141 ds~fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 141 DSQFGHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred ccccCCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 12234579999999999999999999999999998888876653
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0014 Score=61.18 Aligned_cols=121 Identities=11% Similarity=0.084 Sum_probs=75.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++|+.|++. +++.++|+.....+..+.+.+|+..-. ..++...+. ....-.|+
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f--d~i~~~~~~-----------------~~~KP~~~ 156 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF--DDIFVSEDA-----------------GIQKPDKE 156 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc--CEEEEcCcc-----------------CCCCCCHH
Confidence 5789999999999999 999999999999999999999985311 011110000 00111121
Q ss_pred hHHHHHHHH-hhcCCEEEEEcCCC-CchhHHhhcCee-EEec--CchHHHHhhcchhccCCChhHHHH
Q 013242 246 HKYEIVKHL-QARNHICGMIGNGV-NDAPALKKADIG-IAVA--DATDAARSAADIVLTEPGLNVIIT 308 (447)
Q Consensus 246 ~K~~iV~~l-q~~g~~v~~iGDg~-ND~~al~~A~vG-Ia~~--~a~~~a~~aAD~vl~~~~~~~i~~ 308 (447)
-=..+++.+ .-....+++|||+. +|+.+-+.+|+- |.+. ..++.....+|+++. ++..+..
T Consensus 157 ~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~--~~~el~~ 222 (224)
T TIGR02254 157 IFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIR--SLEELYE 222 (224)
T ss_pred HHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEEC--CHHHHHh
Confidence 113344445 44456799999998 899999999974 3332 222122234566653 3555543
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0044 Score=55.09 Aligned_cols=103 Identities=15% Similarity=0.143 Sum_probs=65.7
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHH---HHHHHh---C--CCCCCCCcccccCCcchhhhhcCChhHHHhh
Q 013242 164 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAK---ETGRRL---G--MGTNMYPSSALSGQDRDESIVALPVDELIEK 235 (447)
Q Consensus 164 ~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~---~ia~~l---G--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (447)
+|.+.+++.+++++++++|++++++||+....+. .....+ | ++. -+....+|.... ... .
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~--g~li~~~g~~~~-~~~---------~ 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH--GPVLLSPDRLFA-ALH---------R 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC--ceEEEcCCcchh-hhh---------c
Confidence 4678999999999999999999999999988874 555552 3 321 001111111000 000 0
Q ss_pred ccchhccCh-hhHHHHHHHHhh-----cCCEEEEEcCCCCchhHHhhcCee
Q 013242 236 ADGFAGVFP-EHKYEIVKHLQA-----RNHICGMIGNGVNDAPALKKADIG 280 (447)
Q Consensus 236 ~~v~a~~~p-~~K~~iV~~lq~-----~g~~v~~iGDg~ND~~al~~A~vG 280 (447)
.+. ...| +.|...++.+.+ ....++.+|++.+|+.+.+++++.
T Consensus 93 -e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 93 -EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred -ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 111 1223 347777777766 345677899999999999998874
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0011 Score=59.94 Aligned_cols=94 Identities=12% Similarity=0.068 Sum_probs=59.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++|+.|+++|+++.++|+... +....+.+|+.... ..++.+.+. ...+-.|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~p~ 145 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF--DAIVDPAEI-----------------KKGKPDPE 145 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC--cEEEehhhc-----------------CCCCCChH
Confidence 5789999999999999999999997543 45667778874211 011111000 01111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 280 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG 280 (447)
-=..+++.+.-....++||||+.+|+.+-+.||+-
T Consensus 146 ~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 146 IFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 21233444443345699999999999999999985
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0026 Score=57.24 Aligned_cols=95 Identities=15% Similarity=0.173 Sum_probs=63.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+.++.|++.|+++.++|+..... ..+..++|+... . ..++.+.+. ....-.|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~-f-~~i~~~~~~-----------------~~~KP~~~ 144 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDL-F-DVVIFSGDV-----------------GRGKPDPD 144 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHH-C-CEEEEcCCC-----------------CCCCCCHH
Confidence 578999999999999999999999988877 555555787421 0 111111000 01111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 280 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG 280 (447)
--..+.+.+......+++|||...|+.+-+.+|+-
T Consensus 145 ~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 145 IYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred HHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCE
Confidence 23344555555567899999999999999999873
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0013 Score=59.51 Aligned_cols=92 Identities=12% Similarity=0.150 Sum_probs=60.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++|+.|++.|+++.++|+. ..+..+.+.+|+..-. ..++.+.. .....|.
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f--~~v~~~~~-------------------~~~~kp~ 144 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF--DAIVDADE-------------------VKEGKPH 144 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC--CEeeehhh-------------------CCCCCCC
Confidence 58899999999999999999999987 5577778888874210 01110000 0011121
Q ss_pred h--HHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee
Q 013242 246 H--KYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 280 (447)
Q Consensus 246 ~--K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG 280 (447)
. =..+.+.+......+++|||+.+|+.+-+.||+.
T Consensus 145 ~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 145 PETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 1 1223333333345699999999999999999885
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0027 Score=64.24 Aligned_cols=68 Identities=24% Similarity=0.222 Sum_probs=49.3
Q ss_pred hccChh---hHHHHHHHHhhc-C---C---EEEEEcCCCCchhHHhh-----cCeeEEecCchHHHHhhcchhccCCChh
Q 013242 240 AGVFPE---HKYEIVKHLQAR-N---H---ICGMIGNGVNDAPALKK-----ADIGIAVADATDAARSAADIVLTEPGLN 304 (447)
Q Consensus 240 a~~~p~---~K~~iV~~lq~~-g---~---~v~~iGDg~ND~~al~~-----A~vGIa~~~a~~~a~~aAD~vl~~~~~~ 304 (447)
.++.|. +|...|+.+.+. + . .++++||+.||..||+. +++||+|+++... ..|++.+.+ -.
T Consensus 292 lEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~--t~A~y~L~d--p~ 367 (384)
T PLN02580 292 LEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKE--SNAFYSLRD--PS 367 (384)
T ss_pred EEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCC--ccceEEcCC--HH
Confidence 345563 899988887664 2 1 25899999999999996 6999999986543 357888844 66
Q ss_pred HHHHHHH
Q 013242 305 VIITAVL 311 (447)
Q Consensus 305 ~i~~~i~ 311 (447)
.+...+.
T Consensus 368 eV~~~L~ 374 (384)
T PLN02580 368 EVMEFLK 374 (384)
T ss_pred HHHHHHH
Confidence 6665554
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0043 Score=58.12 Aligned_cols=123 Identities=12% Similarity=0.096 Sum_probs=75.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++++.|+ .|+++.++|+.....+....+.+|+..-. ..++.+.+. ....-.|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~~-----------------~~~KP~p~ 154 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF--DLLVISEQV-----------------GVAKPDVA 154 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc--CEEEEECcc-----------------CCCCCCHH
Confidence 36799999999999 68999999999888888888888884210 011111000 00111122
Q ss_pred hHHHHHHHHhhc-CCEEEEEcCCC-CchhHHhhcCee-EEec-CchH-HHHhhcchhccCCChhHHHHHH
Q 013242 246 HKYEIVKHLQAR-NHICGMIGNGV-NDAPALKKADIG-IAVA-DATD-AARSAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 246 ~K~~iV~~lq~~-g~~v~~iGDg~-ND~~al~~A~vG-Ia~~-~a~~-~a~~aAD~vl~~~~~~~i~~~i 310 (447)
-=..+++.+.-. ...+++|||+. +|+.+-+.||+- |.+. .+.. .....+|+++ +++..+..++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 155 IFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred HHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 222334444422 35799999998 799999999986 4443 2211 1112467776 3466665544
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0068 Score=54.80 Aligned_cols=112 Identities=8% Similarity=-0.044 Sum_probs=72.0
Q ss_pred EEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCC-cHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHh
Q 013242 156 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGD-QLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIE 234 (447)
Q Consensus 156 ~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd-~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (447)
.......-.-++.|++.++++.|+++|+++.++|+. ....+..+...+|+..... ..++.+...
T Consensus 35 ~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~---------------~~~~~~~Fd 99 (174)
T TIGR01685 35 IIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGK---------------TVPMHSLFD 99 (174)
T ss_pred eEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCC---------------cccHHHhce
Confidence 345555556678899999999999999999999987 8888899989888741000 000000000
Q ss_pred hccchhccChhhH--HHHHHHHhhc------CCEEEEEcCCCCchhHHhhcCeeEEe
Q 013242 235 KADGFAGVFPEHK--YEIVKHLQAR------NHICGMIGNGVNDAPALKKADIGIAV 283 (447)
Q Consensus 235 ~~~v~a~~~p~~K--~~iV~~lq~~------g~~v~~iGDg~ND~~al~~A~vGIa~ 283 (447)
. .+.+.-.+..| ..+.+.+.+. ...++||||...|+.+-+.|++-...
T Consensus 100 ~-iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 100 D-RIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred e-eeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 0 00111111112 2344544432 35699999999999999999987654
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.004 Score=55.64 Aligned_cols=100 Identities=13% Similarity=0.031 Sum_probs=60.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC---------------cHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGD---------------QLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVD 230 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd---------------~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (447)
++-|++.++|++|++.|+++.++|.. ....+..+.+.+|+. +.. .+.+.... .+
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~---fd~-ii~~~~~~-------~~ 97 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII---FDD-VLICPHFP-------DD 97 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc---eeE-EEECCCCC-------CC
Confidence 36689999999999999999999985 234566677777873 110 11110000 00
Q ss_pred HHHhhccchhccChh--hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEe
Q 013242 231 ELIEKADGFAGVFPE--HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 283 (447)
Q Consensus 231 ~~~~~~~v~a~~~p~--~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~ 283 (447)
. .....|. -=..+++.+......++||||+.+|+.+-+.+++-...
T Consensus 98 ------~-~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~ 145 (161)
T TIGR01261 98 ------N-CDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQ 145 (161)
T ss_pred ------C-CCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEE
Confidence 0 0001121 11122233322334699999999999999999987543
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0041 Score=63.52 Aligned_cols=116 Identities=20% Similarity=0.204 Sum_probs=73.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHH-HhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccCh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGR-RLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 244 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~-~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p 244 (447)
++.|++.++++.|++.|+++.|+|+.....+....+ ..|+..-. ..++.+.+. ....-.|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F--d~ii~~d~v-----------------~~~KP~p 153 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF--SVIVGGDEV-----------------EKGKPSP 153 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC--CEEEehhhc-----------------CCCCCCH
Confidence 367999999999999999999999998888776655 56763210 011111000 0111222
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee-EEecC--chHHHHhhcchhccC
Q 013242 245 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVAD--ATDAARSAADIVLTE 300 (447)
Q Consensus 245 ~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG-Ia~~~--a~~~a~~aAD~vl~~ 300 (447)
+-=..+++.+......|+||||+.+|+.+-+.||+. |++.. ........+|.++.+
T Consensus 154 ~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~s 212 (382)
T PLN02940 154 DIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINS 212 (382)
T ss_pred HHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCC
Confidence 323344555555567899999999999999999987 33432 222233456666533
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.016 Score=54.88 Aligned_cols=130 Identities=18% Similarity=0.175 Sum_probs=79.8
Q ss_pred hHHHHHHHHHHHHHhhhhhhhh--hhcccCCCCcCCCCCCcEEEEeccCCCCCCcchHHHHHHH--HhCCCeEEEEcCCc
Q 013242 117 IGRKVNAVINKFAERGLRSLAV--AYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRA--LSLGLGVKMITGDQ 192 (447)
Q Consensus 117 ~~~~~~~~~~~~~~~G~r~l~v--A~~~~~~~~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l--~~~Gi~v~miTGd~ 192 (447)
+.+..+..+..+.++|.+.--+ +.+.+ |+.|+.++.++.+ +..|+.++++|.-+
T Consensus 42 wt~~m~~vl~~L~~~gvt~~~I~~~l~~i----------------------p~~pgm~~~l~~l~~~~~~~~~~IiSDaN 99 (234)
T PF06888_consen 42 WTEYMDRVLQLLHEQGVTPEDIRDALRSI----------------------PIDPGMKELLRFLAKNQRGFDLIIISDAN 99 (234)
T ss_pred hHHHHHHHHHHHHHcCCCHHHHHHHHHcC----------------------CCCccHHHHHHHHHhcCCCceEEEEeCCc
Confidence 4455566667777777444333 23332 4788999999999 46899999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccCh-hhHHHHHHHHhhc----C---CEEEEE
Q 013242 193 LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP-EHKYEIVKHLQAR----N---HICGMI 264 (447)
Q Consensus 193 ~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p-~~K~~iV~~lq~~----g---~~v~~i 264 (447)
......+.+.-|+.... ..++..+..-+.-....+.... .+.+..+.| -=|..+++.+... | .+|++|
T Consensus 100 s~fI~~iL~~~gl~~~f--~~I~TNpa~~~~~G~l~v~pyh--~h~C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYi 175 (234)
T PF06888_consen 100 SFFIETILEHHGLRDCF--SEIFTNPACFDADGRLRVRPYH--SHGCSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYI 175 (234)
T ss_pred HhHHHHHHHhCCCcccc--ceEEeCCceecCCceEEEeCcc--CCCCCcCCCccchHHHHHHHHHHHhhcCCCcceEEEE
Confidence 99999999999985321 0111111100000000000000 022334433 2588999888764 3 689999
Q ss_pred cCCCCchh
Q 013242 265 GNGVNDAP 272 (447)
Q Consensus 265 GDg~ND~~ 272 (447)
|||.||..
T Consensus 176 GDG~nD~C 183 (234)
T PF06888_consen 176 GDGRNDFC 183 (234)
T ss_pred CCCCCCcC
Confidence 99999954
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0035 Score=54.95 Aligned_cols=98 Identities=18% Similarity=0.181 Sum_probs=60.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcH---------------HHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQL---------------AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVD 230 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~---------------~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (447)
++.|++.++++.|++.|+++.++|+... ..+..+.+.+|+.... .+......
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~----~~~~~~~~--------- 93 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDG----VLFCPHHP--------- 93 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeE----EEECCCCC---------
Confidence 4689999999999999999999998762 4455677778874110 00000000
Q ss_pred HHHhhccchhccChhh--HHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeE
Q 013242 231 ELIEKADGFAGVFPEH--KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 281 (447)
Q Consensus 231 ~~~~~~~v~a~~~p~~--K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGI 281 (447)
........|+. =..+++.+......|+||||...|+.+-+.+++-.
T Consensus 94 -----~~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 94 -----ADNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred -----CCCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCE
Confidence 00000011211 12333444434567999999999999999998853
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0043 Score=56.11 Aligned_cols=123 Identities=16% Similarity=0.138 Sum_probs=64.5
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcH---------------HHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhH
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQL---------------AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 231 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~---------------~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (447)
+.|++.++|+.|+++|+++.++|.-.. .....+....|+.-. ..........+ ...
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~i~~~~~~~~~------~~~ 97 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLD---GIYYCPHHPEG------VEE 97 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCcc---EEEECCCCCcc------ccc
Confidence 568999999999999999999997763 111233334444200 00000000000 000
Q ss_pred HHhhccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeE--EecCch---HHHHhhcchhcc
Q 013242 232 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI--AVADAT---DAARSAADIVLT 299 (447)
Q Consensus 232 ~~~~~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGI--a~~~a~---~~a~~aAD~vl~ 299 (447)
+-.. .....-.|+-=..+.+.++-....++||||..+|+.+-+.|++.. .+..+. ......+|+++.
T Consensus 98 ~~~~-~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~ 169 (176)
T TIGR00213 98 FRQV-CDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLN 169 (176)
T ss_pred ccCC-CCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEec
Confidence 0000 000111122223334444444567999999999999999999853 443221 112234788874
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0051 Score=56.66 Aligned_cols=95 Identities=15% Similarity=0.104 Sum_probs=60.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++-|++.++++.|++.|+++.++|+-... .....+.+|+.... ..++...+. ....-.|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~f--d~i~~s~~~-----------------~~~KP~~~ 164 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYF--DFVVTSYEV-----------------GAEKPDPK 164 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhc--ceEEeeccc-----------------CCCCCCHH
Confidence 57799999999999999999999986654 46677778874210 001100000 00111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCC-CchhHHhhcCee
Q 013242 246 HKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIG 280 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~-ND~~al~~A~vG 280 (447)
-=..+++.+......++||||+. +|+.+-+.||+-
T Consensus 165 ~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 165 IFQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 12234444444456799999997 899999998864
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0055 Score=55.20 Aligned_cols=87 Identities=9% Similarity=0.026 Sum_probs=61.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCc-HHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccCh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQ-LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 244 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~-~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p 244 (447)
.+.|++.++++.|++.|+++.++|+.+ ...+..+.+.+|+... .+ ...-.|
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~-------~~---------------------~~KP~p 94 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVL-------PH---------------------AVKPPG 94 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEE-------cC---------------------CCCCCh
Confidence 577999999999999999999999988 5777778888877310 00 011112
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCC-CchhHHhhcCee
Q 013242 245 EHKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIG 280 (447)
Q Consensus 245 ~~K~~iV~~lq~~g~~v~~iGDg~-ND~~al~~A~vG 280 (447)
+-=..+++.+......++||||.. .|+.+-+.||+-
T Consensus 95 ~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 95 CAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred HHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 111233333433455699999998 799999999985
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.0039 Score=54.69 Aligned_cols=90 Identities=22% Similarity=0.271 Sum_probs=58.5
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhh
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 246 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~ 246 (447)
..+++.+.++.|++.|+++.++|+.....+....+.. +.. ... .++ +.+ ++...-.|+-
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~-~f~-~i~-~~~-----------------~~~~Kp~~~~ 123 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGD-YFD-LIL-GSD-----------------EFGAKPEPEI 123 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHh-cCc-EEE-ecC-----------------CCCCCcCHHH
Confidence 4479999999999999999999999998888887775 421 110 111 000 0011112222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCCCchhHHhhcC
Q 013242 247 KYEIVKHLQARNHICGMIGNGVNDAPALKKAD 278 (447)
Q Consensus 247 K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~ 278 (447)
=..+.+.+.... .+++|||..+|+.+-+.||
T Consensus 124 ~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 124 FLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 233344444445 7999999999999888775
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.014 Score=56.43 Aligned_cols=86 Identities=13% Similarity=0.099 Sum_probs=59.0
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHH---HHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchh
Q 013242 164 FDPPIHDSAETIRRALSLGLGVKMITGDQLA---IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240 (447)
Q Consensus 164 ~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~---~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 240 (447)
..++-|++.+.++.|++.|+++.++|++... .+....+..|+....... ++.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~-------------------------lll 170 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEH-------------------------LLL 170 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcce-------------------------EEe
Confidence 4557899999999999999999999998743 344666778885321111 111
Q ss_pred ccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHH
Q 013242 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPAL 274 (447)
Q Consensus 241 ~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al 274 (447)
+-....|....+.+.+...+++++||..+|....
T Consensus 171 r~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 171 KKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDF 204 (266)
T ss_pred CCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhh
Confidence 1111245555566666667799999999998643
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.0046 Score=54.32 Aligned_cols=97 Identities=13% Similarity=-0.057 Sum_probs=65.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccCh
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 244 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p 244 (447)
-+++|++.+.++.|+ .++++.++|.-....+..+.+.+|+... +-..++.+.+.. ...|
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~-~f~~i~~~~d~~-------------------~~KP 102 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKY-FGYRRLFRDECV-------------------FVKG 102 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCC-EeeeEEECcccc-------------------ccCC
Confidence 357999999999999 5799999999999999999999987421 111111111110 0112
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEe
Q 013242 245 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 283 (447)
Q Consensus 245 ~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~ 283 (447)
. =...++.+......|++|||..+|..+-+.++|-|..
T Consensus 103 ~-~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~ 140 (148)
T smart00577 103 K-YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKP 140 (148)
T ss_pred e-EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecC
Confidence 1 0112344444566899999999999998888766543
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.015 Score=54.42 Aligned_cols=118 Identities=15% Similarity=0.194 Sum_probs=66.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHH-HHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccCh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAK-ETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 244 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~-~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p 244 (447)
++.|++.++|+.|++.|+++.++||....... .+.+..++.. .. ..++.+.+.+ .....-.|
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~-~f-~~i~~~~~~~---------------~~~~KP~p 140 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFS-LM-HHVVTGDDPE---------------VKQGKPAP 140 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHh-hC-CEEEECChhh---------------ccCCCCCc
Confidence 46799999999999999999999998765333 2222233321 00 0111111000 00011122
Q ss_pred hhHHHHHHHHh---hcCCEEEEEcCCCCchhHHhhcCeeEE-ecC--chHHHHhhcchhccC
Q 013242 245 EHKYEIVKHLQ---ARNHICGMIGNGVNDAPALKKADIGIA-VAD--ATDAARSAADIVLTE 300 (447)
Q Consensus 245 ~~K~~iV~~lq---~~g~~v~~iGDg~ND~~al~~A~vGIa-~~~--a~~~a~~aAD~vl~~ 300 (447)
+-=...++.+. -....|+||||+..|+.+-+.||+-.. +.. .+......+|+++.+
T Consensus 141 ~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~ 202 (220)
T PLN02811 141 DIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSS 202 (220)
T ss_pred HHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcC
Confidence 22233444443 334679999999999999999998743 322 122222356777644
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.011 Score=54.40 Aligned_cols=142 Identities=18% Similarity=0.264 Sum_probs=84.9
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhh--hcccCCCCcCCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCC-eEEEEcCCcH
Q 013242 117 IGRKVNAVINKFAERGLRSLAVA--YQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGL-GVKMITGDQL 193 (447)
Q Consensus 117 ~~~~~~~~~~~~~~~G~r~l~vA--~~~~~~~~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi-~v~miTGd~~ 193 (447)
+.+.......++.++|-|.--+. ++.+ |+-|+..++|+.+++.|. .++++|--|.
T Consensus 55 Wne~M~rv~k~Lheqgv~~~~ik~~~r~i----------------------P~~Pgmv~lik~~ak~g~~eliIVSDaNs 112 (256)
T KOG3120|consen 55 WNELMDRVFKELHEQGVRIAEIKQVLRSI----------------------PIVPGMVRLIKSAAKLGCFELIIVSDANS 112 (256)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHhcC----------------------CCCccHHHHHHHHHhCCCceEEEEecCch
Confidence 44556677777888887664443 3433 478999999999999997 9999999999
Q ss_pred HHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhh--HHHHHHHHhhc-------CCEEEEE
Q 013242 194 AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH--KYEIVKHLQAR-------NHICGMI 264 (447)
Q Consensus 194 ~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~--K~~iV~~lq~~-------g~~v~~i 264 (447)
.....+.+..|+.+-. ..++..+..-+.-...-+...-.. + -|...|.. |..++..++.. ..++.++
T Consensus 113 fFIe~~Lea~~~~d~F--~~IfTNPa~~da~G~L~v~pyH~~-h-sC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYv 188 (256)
T KOG3120|consen 113 FFIEEILEAAGIHDLF--SEIFTNPACVDASGRLLVRPYHTQ-H-SCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYV 188 (256)
T ss_pred hHHHHHHHHccHHHHH--HHHhcCCcccCCCCcEEeecCCCC-C-ccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEE
Confidence 9999999988874200 000000000000000000000000 1 12233433 66666665443 2279999
Q ss_pred cCCCCc-hhHHhhcCeeEEec
Q 013242 265 GNGVND-APALKKADIGIAVA 284 (447)
Q Consensus 265 GDg~ND-~~al~~A~vGIa~~ 284 (447)
|||.|| +|+++...--+||-
T Consensus 189 GDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 189 GDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred cCCCCCcCcchhcccCceecc
Confidence 999999 67777776667774
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.015 Score=65.09 Aligned_cols=37 Identities=8% Similarity=-0.020 Sum_probs=32.0
Q ss_pred CCCcchHHHHHHH-HhCCCeEEEEcCCcHHHHHHHHHH
Q 013242 166 PPIHDSAETIRRA-LSLGLGVKMITGDQLAIAKETGRR 202 (447)
Q Consensus 166 ~~r~~~~~~I~~l-~~~Gi~v~miTGd~~~~a~~ia~~ 202 (447)
.+.+++.++|++| ++.|+.|+++||+...........
T Consensus 616 ~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 616 SPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 5678999999997 778999999999999988877644
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.013 Score=55.29 Aligned_cols=88 Identities=18% Similarity=0.288 Sum_probs=57.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHH---HHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhc
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAI---AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 241 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~---a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~ 241 (447)
-|.-|++.++++.|++.|++|+++||+.... +..-.++.|++. +....+.+.... ..
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~--~~~LiLR~~~d~------------------~~ 178 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTG--WKHLILRGLEDS------------------NK 178 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCC--cCeeeecCCCCC------------------Cc
Confidence 4788999999999999999999999999755 444455677752 111111110000 00
Q ss_pred cChhhHHHHHHHHhhcCC-EEEEEcCCCCchh
Q 013242 242 VFPEHKYEIVKHLQARNH-ICGMIGNGVNDAP 272 (447)
Q Consensus 242 ~~p~~K~~iV~~lq~~g~-~v~~iGDg~ND~~ 272 (447)
-...-|.+.-+.+.+.|+ +++.+||..+|..
T Consensus 179 ~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 179 TVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLL 210 (229)
T ss_pred hHhHHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence 011226666667776765 5678999999983
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.014 Score=54.95 Aligned_cols=99 Identities=14% Similarity=0.096 Sum_probs=66.1
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhC---CCCCCCCcccccCCcchhhhhcCChhHHHhhccchh
Q 013242 164 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLG---MGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240 (447)
Q Consensus 164 ~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lG---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 240 (447)
.-++.||+.++|++|++.|+++.++|.........+.+..+ +..- . ...+ + ..+..
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~-f-~~~f--------------d-----~~~g~ 151 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY-F-SGYF--------------D-----TTVGL 151 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh-c-ceEE--------------E-----eCccc
Confidence 35689999999999999999999999988877776666542 2100 0 0000 0 00011
Q ss_pred ccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEe
Q 013242 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 283 (447)
Q Consensus 241 ~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~ 283 (447)
.-.|+-=..+++.+.-....++++||...|+.+-+.||+-...
T Consensus 152 KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 152 KTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred CCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 1123323445555655556799999999999999999997543
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.0079 Score=56.24 Aligned_cols=97 Identities=12% Similarity=0.177 Sum_probs=63.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++|+.| ++++.++|+.....+....+..|+.... ...++.+.+.. ...-.|+
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F-~~~v~~~~~~~-----------------~~KP~p~ 146 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYF-PDKLFSGYDIQ-----------------RWKPDPA 146 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhC-cceEeeHHhcC-----------------CCCCChH
Confidence 4568999999988 5999999999988888888888885211 01111110000 0111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEe
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 283 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~ 283 (447)
-=..+.+.+.-....|+||||+.+|+.+-+.||+.+..
T Consensus 147 ~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 147 LMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 22333444444445699999999999999999988653
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.02 Score=48.97 Aligned_cols=39 Identities=10% Similarity=0.103 Sum_probs=34.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC-cHHHHHHHHHHhC
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGD-QLAIAKETGRRLG 204 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd-~~~~a~~ia~~lG 204 (447)
++.+++.++|+.|++.|+++.++|+. ....+..+.+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68899999999999999999999999 7777777777766
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.028 Score=53.50 Aligned_cols=48 Identities=17% Similarity=0.255 Sum_probs=39.0
Q ss_pred EeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHH--HHHHHhCCC
Q 013242 159 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAK--ETGRRLGMG 206 (447)
Q Consensus 159 G~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~--~ia~~lGi~ 206 (447)
|.+.-...+-|++.++|+.|+++|+++.++|........ ...+++|+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 555566778999999999999999999999986655444 567888885
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.03 Score=64.52 Aligned_cols=117 Identities=15% Similarity=0.173 Sum_probs=78.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
.+.|++.+.|+.|+++|+++.++|+.....+....+.+|+...... .++.+.+.. ...-.|+
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd-~iv~~~~~~-----------------~~KP~Pe 222 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFD-AIVSADAFE-----------------NLKPAPD 222 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCC-EEEECcccc-----------------cCCCCHH
Confidence 3679999999999999999999999999999999999998521111 111111000 0111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee-EEecC---chHHHHhhcchhccC
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVAD---ATDAARSAADIVLTE 300 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG-Ia~~~---a~~~a~~aAD~vl~~ 300 (447)
-=..+++.++.....+++|||..+|+.+-+.|++- |++.. ..+.....+|+++.+
T Consensus 223 ~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~ 281 (1057)
T PLN02919 223 IFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKD 281 (1057)
T ss_pred HHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC
Confidence 22344555555567899999999999999999984 44432 223334567777754
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.031 Score=50.17 Aligned_cols=94 Identities=6% Similarity=-0.004 Sum_probs=58.5
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHH------------HHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHh
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLA------------IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIE 234 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~------------~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (447)
+-|++.++|+.|++.|+++.++|..... .+..+.+.+|+.. ...+.+...
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~----~~ii~~~~~-------------- 104 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI----QVLAATHAG-------------- 104 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE----EEEEecCCC--------------
Confidence 3489999999999999999999975542 4566778888741 111111000
Q ss_pred hccchhccChhhHHHHHHHHh--hcCCEEEEEcCCC--------CchhHHhhcCeeE
Q 013242 235 KADGFAGVFPEHKYEIVKHLQ--ARNHICGMIGNGV--------NDAPALKKADIGI 281 (447)
Q Consensus 235 ~~~v~a~~~p~~K~~iV~~lq--~~g~~v~~iGDg~--------ND~~al~~A~vGI 281 (447)
.+..-.|+-=..+++.+. -....++||||.. +|+.+-+.||+-.
T Consensus 105 ---~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 105 ---LYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred ---CCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 000111111123344443 2345799999986 6999999888754
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.0089 Score=57.10 Aligned_cols=63 Identities=21% Similarity=0.252 Sum_probs=46.1
Q ss_pred hhhHHHHHHHHhhc----CCEEEEEcCCCCchhHHhhc--------CeeEEecCchHHHHhhcchhccCCChhHHHHHH
Q 013242 244 PEHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKA--------DIGIAVADATDAARSAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 244 p~~K~~iV~~lq~~----g~~v~~iGDg~ND~~al~~A--------~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i 310 (447)
+.+|...++.+.+. ...++|+||+.||.+|++.+ ++||+|+.+. .+..|++++. +...+...+
T Consensus 165 ~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~--~~~~A~~~~~--~~~~v~~~L 239 (244)
T TIGR00685 165 FVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS--KKTVAKFHLT--GPQQVLEFL 239 (244)
T ss_pred CCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC--cCCCceEeCC--CHHHHHHHH
Confidence 45688777776554 34799999999999999999 5788885332 3567899885 466665555
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.016 Score=58.27 Aligned_cols=101 Identities=12% Similarity=0.025 Sum_probs=61.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCC---------------cHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCCh
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGD---------------QLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPV 229 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd---------------~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~ 229 (447)
-++.|++.++|+.|+++|+++.|+|+- ....+..+.+..|+. + ..++.+.... .
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~---f-d~i~i~~~~~-------s 97 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK---F-DEVLICPHFP-------E 97 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc---e-eeEEEeCCcC-------c
Confidence 357899999999999999999999983 233455667777763 1 1111110000 0
Q ss_pred hHHHhhccchhccChhh--HHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEe
Q 013242 230 DELIEKADGFAGVFPEH--KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 283 (447)
Q Consensus 230 ~~~~~~~~v~a~~~p~~--K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~ 283 (447)
+ ...++ .|+. =..+.+.+......++||||+.+|..+-+.|++-...
T Consensus 98 d------~~~~r-KP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~ 146 (354)
T PRK05446 98 D------NCSCR-KPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIR 146 (354)
T ss_pred c------cCCCC-CCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEE
Confidence 0 00011 1221 1122222333346799999999999999999987443
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.039 Score=55.50 Aligned_cols=62 Identities=21% Similarity=0.228 Sum_probs=44.5
Q ss_pred hHHHHHHHHhhc-------CCEEEEEcCCCCchhHHhhc-----CeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 013242 246 HKYEIVKHLQAR-------NHICGMIGNGVNDAPALKKA-----DIGIAVADATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 246 ~K~~iV~~lq~~-------g~~v~~iGDg~ND~~al~~A-----~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
+|...++.|-+. +..++++||...|-.||+.. ++||.+|.... ...|++.+ ++.+.+..++.
T Consensus 283 dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k--~T~A~y~L--~dp~eV~~fL~ 356 (366)
T PLN03017 283 DKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK--DTDASYSL--QDPSEVMDFLA 356 (366)
T ss_pred CHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC--CCcceEeC--CCHHHHHHHHH
Confidence 799988887653 23589999999999999865 57777874221 25688888 44666665553
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.064 Score=49.57 Aligned_cols=37 Identities=16% Similarity=0.136 Sum_probs=34.3
Q ss_pred chHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 013242 170 DSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 206 (447)
Q Consensus 170 ~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~ 206 (447)
.+.+.+.+|+++|+.|+.+|.........+-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678899999999999999999999999999999986
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.047 Score=48.33 Aligned_cols=110 Identities=12% Similarity=0.239 Sum_probs=77.1
Q ss_pred HHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEEEEeccCCCC-CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHh
Q 013242 125 INKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDP-PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL 203 (447)
Q Consensus 125 ~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~d~-~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~l 203 (447)
.+.+..+|.+.+.+=..+ ++ ++..++ .-|+.++=+.+++++|+++.++|..+..-+...+..+
T Consensus 20 ~~~L~~~Gikgvi~DlDN-------------TL---v~wd~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l 83 (175)
T COG2179 20 PDILKAHGIKGVILDLDN-------------TL---VPWDNPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKL 83 (175)
T ss_pred HHHHHHcCCcEEEEeccC-------------ce---ecccCCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhc
Confidence 567788888888775543 33 333333 6688889999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhhH--HHHHHHHhhcCCEEEEEcCCC-CchhHHhhcCee
Q 013242 204 GMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHK--YEIVKHLQARNHICGMIGNGV-NDAPALKKADIG 280 (447)
Q Consensus 204 Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~K--~~iV~~lq~~g~~v~~iGDg~-ND~~al~~A~vG 280 (447)
|++- ++.-..|-.+ .+.++.++-....|+||||.. .|+-+=..+|+=
T Consensus 84 ~v~f------------------------------i~~A~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~ 133 (175)
T COG2179 84 GVPF------------------------------IYRAKKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMR 133 (175)
T ss_pred CCce------------------------------eecccCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcE
Confidence 9951 1122223222 233444444466799999985 788776776653
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.039 Score=51.13 Aligned_cols=96 Identities=11% Similarity=0.046 Sum_probs=56.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHH--HHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccC
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAI--AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 243 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~--a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 243 (447)
++.|++.++++.|++.|+++.++|+..... ........++... .. .++...+ .....-.
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~-fd-~v~~s~~-----------------~~~~KP~ 154 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMAL-FD-AVVESCL-----------------EGLRKPD 154 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhh-CC-EEEEeee-----------------cCCCCCC
Confidence 578999999999999999999999875432 2222222333210 00 0000000 0011112
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee
Q 013242 244 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 280 (447)
Q Consensus 244 p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG 280 (447)
|+-=..+++.++-....++||||...|+.+-+.||+-
T Consensus 155 p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 155 PRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred HHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 2222334444444456699999999999999999985
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.046 Score=54.43 Aligned_cols=91 Identities=15% Similarity=0.076 Sum_probs=66.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH----hCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhc
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR----LGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 241 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~----lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~ 241 (447)
++.+++.++|+.|++.|+.+.++|..+...+..+.+. +|+.... .+..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f----------------------------~~~~ 82 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF----------------------------DARS 82 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe----------------------------eEEE
Confidence 3578999999999999999999999999999999888 7663110 0001
Q ss_pred cChhhHHH----HHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEec
Q 013242 242 VFPEHKYE----IVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA 284 (447)
Q Consensus 242 ~~p~~K~~----iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~ 284 (447)
..++.|.+ +++.+.-....++||||...|+.+.+.+...+.+-
T Consensus 83 ~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 83 INWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred EecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 12233444 33444434567999999999999999988876553
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.058 Score=49.59 Aligned_cols=97 Identities=7% Similarity=-0.027 Sum_probs=58.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH-hCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccCh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR-LGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 244 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~-lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p 244 (447)
++.|++.++++.|++.|+++.++|+-+.......... .++... . ..++...+. ....-.|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~-f-d~v~~s~~~-----------------~~~KP~p 144 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA-A-DHIYLSQDL-----------------GMRKPEA 144 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh-c-CEEEEeccc-----------------CCCCCCH
Confidence 4689999999999999999999999876554432221 233110 0 000000000 0011112
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeE
Q 013242 245 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 281 (447)
Q Consensus 245 ~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGI 281 (447)
+-=..+++.++.....+++|||...|+.+-+.+|+-.
T Consensus 145 ~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 145 RIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred HHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 2223344555555567999999999999999999864
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=94.48 E-value=0.072 Score=48.18 Aligned_cols=98 Identities=11% Similarity=0.072 Sum_probs=63.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.+++.++|++|+ .+++++|+.....+..+.+.+|+... .. .++...+.... .....-.|+
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~-fd-~i~~~~~~~~~-------------~~~~KP~p~ 145 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDC-FD-GIFCFDTANPD-------------YLLPKPSPQ 145 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhh-hC-eEEEeecccCc-------------cCCCCCCHH
Confidence 36789999999997 47999999999999999999998421 11 11111000000 000111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeE
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 281 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGI 281 (447)
-=..+++.+......++||||...|+.+-+.||+..
T Consensus 146 ~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 146 AYEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 223455556656678999999999999999998754
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.25 E-value=0.11 Score=46.99 Aligned_cols=90 Identities=14% Similarity=0.154 Sum_probs=59.3
Q ss_pred hHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhhHHHH
Q 013242 171 SAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEI 250 (447)
Q Consensus 171 ~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~K~~i 250 (447)
..+++..|++. +++.++||.....+....+.+|+..-. ..++...+. ....-.|+-=..+
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~f--d~i~~~~~~-----------------~~~KP~p~~~~~~ 151 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYF--DAVVAADDV-----------------QHHKPAPDTFLRC 151 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHc--eEEEehhhc-----------------cCCCCChHHHHHH
Confidence 46899999875 899999999999999999999985210 111111000 0111122222334
Q ss_pred HHHHhhcCCEEEEEcCCCCchhHHhhcCee
Q 013242 251 VKHLQARNHICGMIGNGVNDAPALKKADIG 280 (447)
Q Consensus 251 V~~lq~~g~~v~~iGDg~ND~~al~~A~vG 280 (447)
.+.++.....|++|||..+|+.+-+.||+-
T Consensus 152 ~~~~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 152 AQLMGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHcCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 444544445699999999999999999986
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=93.91 E-value=0.11 Score=51.43 Aligned_cols=48 Identities=25% Similarity=0.304 Sum_probs=38.9
Q ss_pred EeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHH---HHhCCC
Q 013242 159 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG---RRLGMG 206 (447)
Q Consensus 159 G~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia---~~lGi~ 206 (447)
|++--.+.+-|++.++|+.|++.|++++++|++...+...++ +.+|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 555556777799999999999999999999999976666665 556763
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=93.71 E-value=0.1 Score=49.87 Aligned_cols=50 Identities=26% Similarity=0.351 Sum_probs=40.5
Q ss_pred hccCh--hhHHHHHHHHhhcCCEEEEEcC----CCCchhHHhh-cCeeEEecCchHHH
Q 013242 240 AGVFP--EHKYEIVKHLQARNHICGMIGN----GVNDAPALKK-ADIGIAVADATDAA 290 (447)
Q Consensus 240 a~~~p--~~K~~iV~~lq~~g~~v~~iGD----g~ND~~al~~-A~vGIa~~~a~~~a 290 (447)
.++.| -+|...++.|+ ....|+++|| |.||.+||+. --.||++.+-.+..
T Consensus 181 iDi~~~gvnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~~~ 237 (245)
T PLN02423 181 FDVFPQGWDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDDTR 237 (245)
T ss_pred EEEeeCCCCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHHHH
Confidence 34444 36999999999 7789999999 8999999996 77899997655544
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=93.42 E-value=0.15 Score=46.57 Aligned_cols=92 Identities=12% Similarity=0.106 Sum_probs=54.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCC--CCcccccCCcchhhhhcCChhHHHhhccchhccC
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNM--YPSSALSGQDRDESIVALPVDELIEKADGFAGVF 243 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 243 (447)
++.|++.++++.|++.+ +.+++|.-+........+.+|+..-. +-..++. ++..
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~-----------------------~~~~ 129 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLM-----------------------CGHD 129 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEE-----------------------eccC
Confidence 36899999999999975 56777765544444455566653100 0000110 1111
Q ss_pred hhhHHHHHHHHhh-c-CCEEEEEcCCCCchhHHhhc--CeeEE
Q 013242 244 PEHKYEIVKHLQA-R-NHICGMIGNGVNDAPALKKA--DIGIA 282 (447)
Q Consensus 244 p~~K~~iV~~lq~-~-g~~v~~iGDg~ND~~al~~A--~vGIa 282 (447)
. .|.+++....+ . ...++||||..+|+.+-+.| |+-..
T Consensus 130 ~-~kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i 171 (197)
T PHA02597 130 E-SKEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVI 171 (197)
T ss_pred c-ccHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEE
Confidence 1 12333332222 2 34688999999999999999 98643
|
2 hypothetical protein; Provisional |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=93.25 E-value=0.35 Score=43.36 Aligned_cols=112 Identities=17% Similarity=0.160 Sum_probs=78.3
Q ss_pred HHHhhhhhhhhhhcccCCCCcCCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCC--eEEEEcCC-------cHHHHHH
Q 013242 128 FAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGL--GVKMITGD-------QLAIAKE 198 (447)
Q Consensus 128 ~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi--~v~miTGd-------~~~~a~~ 198 (447)
+.+.|.+.+.+=... ++ ...=++.+.|+..+.+++|++.+. +|+++|.. +...|..
T Consensus 36 Lk~~Gik~li~DkDN-------------TL--~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~ 100 (168)
T PF09419_consen 36 LKKKGIKALIFDKDN-------------TL--TPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA 100 (168)
T ss_pred hhhcCceEEEEcCCC-------------CC--CCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH
Confidence 556677766664433 11 123457788999999999999987 49999987 4788999
Q ss_pred HHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhhHHHHHHHHhhc-----CCEEEEEcCCC-Cchh
Q 013242 199 TGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQAR-----NHICGMIGNGV-NDAP 272 (447)
Q Consensus 199 ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~K~~iV~~lq~~-----g~~v~~iGDg~-ND~~ 272 (447)
+.+.+|+.- -.+....|.-..++.+.++.+ .+.++||||-. .|+-
T Consensus 101 ~~~~lgIpv-----------------------------l~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl 151 (168)
T PF09419_consen 101 LEKALGIPV-----------------------------LRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVL 151 (168)
T ss_pred HHHhhCCcE-----------------------------EEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHH
Confidence 999999840 012334565566788888755 56799999974 6777
Q ss_pred HHhhcC-eeEEe
Q 013242 273 ALKKAD-IGIAV 283 (447)
Q Consensus 273 al~~A~-vGIa~ 283 (447)
|=...| .+|=+
T Consensus 152 ~gN~~G~~tilv 163 (168)
T PF09419_consen 152 MGNRMGSYTILV 163 (168)
T ss_pred HhhccCceEEEE
Confidence 666665 44433
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=93.05 E-value=0.14 Score=48.44 Aligned_cols=90 Identities=22% Similarity=0.202 Sum_probs=56.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHH---HHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhc
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLA---IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 241 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~---~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~ 241 (447)
+++-|++.+.++.+++.|++|+.+||+... .+..-.++.|+... ....+.+.... -..
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~--~~l~lr~~~~~-----------------~~~ 174 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW--DHLILRPDKDP-----------------SKK 174 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB--SCGEEEEESST-----------------SS-
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc--chhcccccccc-----------------ccc
Confidence 356678999999999999999999999864 33444566776421 11111111000 000
Q ss_pred cChhhHHHHHHHHhhcCC-EEEEEcCCCCchhH
Q 013242 242 VFPEHKYEIVKHLQARNH-ICGMIGNGVNDAPA 273 (447)
Q Consensus 242 ~~p~~K~~iV~~lq~~g~-~v~~iGDg~ND~~a 273 (447)
...+.|...-+.+.++|+ +++.+||..+|..-
T Consensus 175 ~~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 175 SAVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp -----SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred cccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 112347777888888855 57889999999875
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.84 E-value=0.33 Score=45.63 Aligned_cols=99 Identities=15% Similarity=0.183 Sum_probs=72.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccCh
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 244 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p 244 (447)
.++.|++.+.++.|++.|+.+.+.|+.....+..+...+|+.... ..++.+.+.. -..-.|
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f--~~~v~~~dv~-----------------~~KP~P 145 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYF--DVIVTADDVA-----------------RGKPAP 145 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhc--chhccHHHHh-----------------cCCCCC
Confidence 468899999999999999999999999999999999999985211 1111110000 012234
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEE
Q 013242 245 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 282 (447)
Q Consensus 245 ~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa 282 (447)
+-=....+.|.-....|+.|.|+.|.+.+-+.||.-+-
T Consensus 146 d~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv 183 (221)
T COG0637 146 DIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVV 183 (221)
T ss_pred HHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEE
Confidence 44455566666667789999999999999999998743
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=92.28 E-value=0.57 Score=49.50 Aligned_cols=98 Identities=15% Similarity=0.063 Sum_probs=62.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH-hCCCCCCCC------cccccCCcchhhhhcCChhHHHhhccch
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR-LGMGTNMYP------SSALSGQDRDESIVALPVDELIEKADGF 239 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~-lGi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 239 (447)
+++++.+ .+++.|. ++++|+-....+++++++ +|++.-.-. ...+.|.-.. -
T Consensus 111 l~~~a~~---~~~~~g~-~vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g-----------------~ 169 (497)
T PLN02177 111 VHPETWR---VFNSFGK-RYIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKK-----------------P 169 (497)
T ss_pred cCHHHHH---HHHhCCC-EEEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecC-----------------C
Confidence 4555444 4456775 499999999999999987 898621111 1111111000 0
Q ss_pred hccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecC
Q 013242 240 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVAD 285 (447)
Q Consensus 240 a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~ 285 (447)
..+.-++|..-++..........+.||+.||.|||+.|+.+.++..
T Consensus 170 ~~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 170 GVLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred CCCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 0134566877776433211223789999999999999999999975
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=91.96 E-value=0.93 Score=43.77 Aligned_cols=89 Identities=21% Similarity=0.240 Sum_probs=53.3
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHH---HHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchh
Q 013242 164 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKET---GRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240 (447)
Q Consensus 164 ~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~i---a~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 240 (447)
..|.-|++.+..+.+++.|++|+++||+....-..+ .++.|+... ....+.+.... -.
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~--~~LiLR~~~D~-----------------~~ 203 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW--EKLILKDPQDN-----------------SA 203 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc--ceeeecCCCCC-----------------cc
Confidence 456778999999999999999999999986432222 344677421 11111111000 00
Q ss_pred ccChhhHHHHHHHHhhcCC-EEEEEcCCCCch
Q 013242 241 GVFPEHKYEIVKHLQARNH-ICGMIGNGVNDA 271 (447)
Q Consensus 241 ~~~p~~K~~iV~~lq~~g~-~v~~iGDg~ND~ 271 (447)
.-..+.|...-+.+.+.|+ +++.+||..+|.
T Consensus 204 ~~av~yKs~~R~~li~eGYrIv~~iGDq~sDl 235 (275)
T TIGR01680 204 ENAVEYKTAARAKLIQEGYNIVGIIGDQWNDL 235 (275)
T ss_pred chhHHHHHHHHHHHHHcCceEEEEECCCHHhc
Confidence 0112334444455555655 578899999998
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.53 E-value=0.79 Score=42.60 Aligned_cols=95 Identities=16% Similarity=0.184 Sum_probs=61.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++-+++.++++.++.. ++++++|...........+++|+..- .......+. ..+..-.|+
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~-Fd~v~~s~~------------------~g~~KP~~~ 158 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDY-FDAVFISED------------------VGVAKPDPE 158 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhh-hheEEEecc------------------cccCCCCcH
Confidence 4678999999999998 99999999888889999999997421 111111100 001111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCC-CchhHHhhcCee
Q 013242 246 HKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIG 280 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~-ND~~al~~A~vG 280 (447)
-=..+.+.+......++||||+. ||+..-+.+|+-
T Consensus 159 ~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~ 194 (229)
T COG1011 159 IFEYALEKLGVPPEEALFVGDSLENDILGARALGMK 194 (229)
T ss_pred HHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcE
Confidence 22344455555566899999965 775777777764
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=91.32 E-value=0.15 Score=41.70 Aligned_cols=48 Identities=21% Similarity=0.304 Sum_probs=35.3
Q ss_pred EeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHH---HHhCCC
Q 013242 159 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG---RRLGMG 206 (447)
Q Consensus 159 G~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia---~~lGi~ 206 (447)
|++...+.+-|++.++|+.|++.|++++++|.....+...++ +.+|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 445556778899999999999999999999988755544444 566774
|
... |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=91.24 E-value=1.7 Score=38.54 Aligned_cols=102 Identities=20% Similarity=0.156 Sum_probs=66.4
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHH---HHHHHh-----CCCCCCCCcccccCCcc-hhhhhcCChhHHHhh
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAK---ETGRRL-----GMGTNMYPSSALSGQDR-DESIVALPVDELIEK 235 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~---~ia~~l-----Gi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 235 (447)
|..++++.+..+.++++|++++-+|++..-.+. ....+. +++. ..++...+. -..+.
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~----Gpv~~sP~~l~~al~---------- 91 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPD----GPVLLSPDSLFSALH---------- 91 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCC----CCEEECCcchhhhhh----------
Confidence 689999999999999999999999999965443 334444 3321 111111110 00000
Q ss_pred ccchhccChhhHHHHHHHHhhc-----CCEEEEEcCCCCchhHHhhcCee
Q 013242 236 ADGFAGVFPEHKYEIVKHLQAR-----NHICGMIGNGVNDAPALKKADIG 280 (447)
Q Consensus 236 ~~v~a~~~p~~K~~iV~~lq~~-----g~~v~~iGDg~ND~~al~~A~vG 280 (447)
-++..+-.-+.|...++.++.. ...++.+|...+|+.+.+.++|.
T Consensus 92 rEvi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 92 REVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred ccccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 0122333345688888888764 33578899999999999998875
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=90.33 E-value=0.87 Score=45.82 Aligned_cols=62 Identities=21% Similarity=0.234 Sum_probs=43.9
Q ss_pred hHHHHHHHHhhc-C------CEEEEEcCCCCchhHHhhc-----CeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 013242 246 HKYEIVKHLQAR-N------HICGMIGNGVNDAPALKKA-----DIGIAVADATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 246 ~K~~iV~~lq~~-g------~~v~~iGDg~ND~~al~~A-----~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
+|...|+.+.+. + ..++++||...|-.||+.. |+||-++.+.. ...|++.+.+ -+.+..++.
T Consensus 269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k--~T~A~y~L~d--p~eV~~~L~ 342 (354)
T PLN02151 269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAK--ETNASYSLQE--PDEVMEFLE 342 (354)
T ss_pred CHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCC--CCcceEeCCC--HHHHHHHHH
Confidence 799999887654 2 2489999999999999853 67787774221 2368888844 666665554
|
|
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=89.97 E-value=0.44 Score=42.46 Aligned_cols=85 Identities=15% Similarity=0.075 Sum_probs=52.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++++ ++.++|.-+........+.+|+..-. ..++.+.+ .....-.|+
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~-----------------~~~~KP~p~ 143 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYF--DRAFSVDT-----------------VRAYKPDPV 143 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHH--hhhccHhh-----------------cCCCCCCHH
Confidence 47889999998 37899999988888888988884210 00010000 001111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhh
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKK 276 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~ 276 (447)
-=..+.+.+.-....|+||||+..|+.+-+.
T Consensus 144 ~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~ 174 (175)
T TIGR01493 144 VYELVFDTVGLPPDRVLMVAAHQWDLIGARK 174 (175)
T ss_pred HHHHHHHHHCCCHHHeEeEecChhhHHHHhc
Confidence 2244455555556679999999999877654
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=89.82 E-value=1.3 Score=43.11 Aligned_cols=48 Identities=19% Similarity=0.221 Sum_probs=35.5
Q ss_pred EeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHH---HHHHHhCCC
Q 013242 159 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAK---ETGRRLGMG 206 (447)
Q Consensus 159 G~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~---~ia~~lGi~ 206 (447)
|.+.-.+.+-|++.++|++|++.|++++++||+...+.. .-.+++|+.
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 344445667788999999999999999999997644333 334567774
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.37 E-value=0.97 Score=42.79 Aligned_cols=92 Identities=11% Similarity=0.072 Sum_probs=55.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++-|++.++++.|++. +++.++|..+.. .+.+|+..-. ..++... -+....|.
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~f--d~i~~~~-------------------~~~~~KP~ 165 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYF--EFVLRAG-------------------PHGRSKPF 165 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhh--ceeEecc-------------------cCCcCCCc
Confidence 4678999999999975 899999986654 1455653110 0000000 00111121
Q ss_pred --hHHHHHHHHhhcCCEEEEEcCC-CCchhHHhhcCeeEEec
Q 013242 246 --HKYEIVKHLQARNHICGMIGNG-VNDAPALKKADIGIAVA 284 (447)
Q Consensus 246 --~K~~iV~~lq~~g~~v~~iGDg-~ND~~al~~A~vGIa~~ 284 (447)
-=..+++.+.-....++||||+ ..|+.+-+.||+-...-
T Consensus 166 p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v 207 (238)
T PRK10748 166 SDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWI 207 (238)
T ss_pred HHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEE
Confidence 1122334444445679999999 59999999999875543
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=88.91 E-value=0.73 Score=44.99 Aligned_cols=41 Identities=7% Similarity=-0.016 Sum_probs=38.2
Q ss_pred CC-cchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC
Q 013242 167 PI-HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 207 (447)
Q Consensus 167 ~r-~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~ 207 (447)
+| |++.+++++|++.|+++.++|+.....+....+.+|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 56 999999999999999999999999999999999999973
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=88.57 E-value=0.56 Score=45.10 Aligned_cols=48 Identities=23% Similarity=0.370 Sum_probs=37.0
Q ss_pred EeccCCCC----CCcchHHHHHHHHhCCCeEEEEcCCcHHH---HHHHHHHhCCC
Q 013242 159 GLIPLFDP----PIHDSAETIRRALSLGLGVKMITGDQLAI---AKETGRRLGMG 206 (447)
Q Consensus 159 G~i~l~d~----~r~~~~~~I~~l~~~Gi~v~miTGd~~~~---a~~ia~~lGi~ 206 (447)
|.+--.+. +-|++.++|++|+++|++++++||+...+ .....+.+|++
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 44444455 78899999999999999999999987665 44455666774
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=87.96 E-value=0.9 Score=43.43 Aligned_cols=48 Identities=8% Similarity=0.016 Sum_probs=39.5
Q ss_pred EeccCCCCCCcchHHHHHHHHhCCCeEEEEcC---CcHHHHHHHHHHhCCC
Q 013242 159 GLIPLFDPPIHDSAETIRRALSLGLGVKMITG---DQLAIAKETGRRLGMG 206 (447)
Q Consensus 159 G~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTG---d~~~~a~~ia~~lGi~ 206 (447)
|.+.-.+.+-|++.++|++|++.|++++++|| +.........+.+|+.
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~ 60 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIP 60 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 44445566677999999999999999999996 6678788888888885
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=87.67 E-value=0.88 Score=43.38 Aligned_cols=36 Identities=19% Similarity=0.310 Sum_probs=31.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHH
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGR 201 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~ 201 (447)
++.+.++++|++++++|++++++||++.........
T Consensus 22 ~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~ 57 (247)
T PTZ00174 22 PITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLG 57 (247)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHh
Confidence 488999999999999999999999999986655443
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=87.35 E-value=0.6 Score=44.71 Aligned_cols=45 Identities=20% Similarity=0.316 Sum_probs=39.3
Q ss_pred EeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHh
Q 013242 159 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL 203 (447)
Q Consensus 159 G~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~l 203 (447)
|++.-.+.+-|++.++|+.|++.|++++++||+...+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 556666788999999999999999999999999998888777765
|
|
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=86.82 E-value=2 Score=45.74 Aligned_cols=40 Identities=15% Similarity=0.172 Sum_probs=33.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcH------------HHHHHHHHHhCCC
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQL------------AIAKETGRRLGMG 206 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~------------~~a~~ia~~lGi~ 206 (447)
+-|++.++|+.|++.|++++|+|.-.. ..+..+.+.+|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 469999999999999999999997544 3466778888874
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=86.77 E-value=0.56 Score=41.76 Aligned_cols=95 Identities=15% Similarity=0.040 Sum_probs=62.2
Q ss_pred CCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhcc
Q 013242 163 LFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 242 (447)
Q Consensus 163 l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~ 242 (447)
+.=..||++.+.++.|.+. +.+++.|-.....|..+.+.++.....+.. .+..... ..
T Consensus 39 ~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~~-~l~r~~~--------------------~~ 96 (162)
T TIGR02251 39 VYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVISR-RLYRESC--------------------VF 96 (162)
T ss_pred EEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEeE-EEEcccc--------------------EE
Confidence 3345899999999999987 999999999999999999999874211111 1110000 00
Q ss_pred ChhhHHHHHHHH---hhcCCEEEEEcCCCCchhHHhhcCeeEE
Q 013242 243 FPEHKYEIVKHL---QARNHICGMIGNGVNDAPALKKADIGIA 282 (447)
Q Consensus 243 ~p~~K~~iV~~l---q~~g~~v~~iGDg~ND~~al~~A~vGIa 282 (447)
.|..+++.| ......|+++||...|..+-..+++-|.
T Consensus 97 ---~~~~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~ 136 (162)
T TIGR02251 97 ---TNGKYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIK 136 (162)
T ss_pred ---eCCCEEeEchhcCCChhhEEEEeCChhhhccCccCEeecC
Confidence 001122323 3334579999999998877766655544
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=86.69 E-value=0.59 Score=44.94 Aligned_cols=120 Identities=14% Similarity=0.140 Sum_probs=67.0
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhc-----cchhcc
Q 013242 168 IHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKA-----DGFAGV 242 (447)
Q Consensus 168 r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~a~~ 242 (447)
-++..++++.|++.|+++.++|+............+|+.. +...+... ..+..-
T Consensus 122 y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~---------------------~~~~i~~~~~~~~~~~gKP 180 (257)
T TIGR01458 122 YQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGP---------------------FVTALEYATDTKATVVGKP 180 (257)
T ss_pred HHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchH---------------------HHHHHHHHhCCCceeecCC
Confidence 3678889999999999999999876543332222222210 00000000 011122
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCC-CchhHHhhcCee-EEecCc--h-H---HHHhhcchhccCCChhHHHHHH
Q 013242 243 FPEHKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIG-IAVADA--T-D---AARSAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 243 ~p~~K~~iV~~lq~~g~~v~~iGDg~-ND~~al~~A~vG-Ia~~~a--~-~---~a~~aAD~vl~~~~~~~i~~~i 310 (447)
.|+-=..+++.+......++||||.. +|+.+-+.+++- |.+..+ . . .....+|+++ +++..+...+
T Consensus 181 ~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~--~sl~el~~~l 254 (257)
T TIGR01458 181 SKTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTC--DSLPHAVDLI 254 (257)
T ss_pred CHHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEE--CCHHHHHHHH
Confidence 22222334445554567899999996 999999999886 334322 1 1 1123467776 4466665443
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=86.28 E-value=1.3 Score=43.35 Aligned_cols=40 Identities=3% Similarity=-0.135 Sum_probs=36.8
Q ss_pred CC-cchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 013242 167 PI-HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 206 (447)
Q Consensus 167 ~r-~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~ 206 (447)
+| |++.++|++|+++|+++.++|+.....+..+.+.+|+.
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~ 188 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLE 188 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCC
Confidence 45 99999999999999999999988888889999999996
|
|
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=85.29 E-value=3.5 Score=41.42 Aligned_cols=37 Identities=11% Similarity=0.084 Sum_probs=34.9
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHh-C
Q 013242 168 IHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL-G 204 (447)
Q Consensus 168 r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~l-G 204 (447)
-|++.+.++.|+++|+++.++|+-....+..+.+.+ |
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 579999999999999999999999999999999996 6
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=83.53 E-value=1.8 Score=36.87 Aligned_cols=32 Identities=19% Similarity=0.306 Sum_probs=28.4
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHH
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIA 196 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a 196 (447)
+++.+++.++++.+++.|+.++++||++....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~ 54 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTY 54 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhh
Confidence 56889999999999999999999999987643
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=82.23 E-value=8.6 Score=34.91 Aligned_cols=103 Identities=12% Similarity=0.182 Sum_probs=54.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCc--chhhhh--cCChhHHH--hhc-cch
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQD--RDESIV--ALPVDELI--EKA-DGF 239 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~--~~~-~v~ 239 (447)
+.+++.+++..++++|++++|+|.- -|+....++...+.... ....+. ...++.++ ..+ ...
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQ-----------sGi~rgyf~~~~f~~~~~~m~~~l~~~gv~id~i~~Cph~p~~~ 100 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQ-----------SGIGRGYFTEADFDKLHNKMLKILASQGVKIDGILYCPHHPEDN 100 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECC-----------CCccccCccHHHHHHHHHHHHHHHHHcCCccceEEECCCCCCCC
Confidence 5689999999999999999999952 23322111111000000 000000 00011100 000 001
Q ss_pred hccChhhHHHHHHHHhhc---CCEEEEEcCCCCchhHHhhcCee
Q 013242 240 AGVFPEHKYEIVKHLQAR---NHICGMIGNGVNDAPALKKADIG 280 (447)
Q Consensus 240 a~~~p~~K~~iV~~lq~~---g~~v~~iGDg~ND~~al~~A~vG 280 (447)
|.+-......+.+.+++. -....+|||...|..+-..|++.
T Consensus 101 c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 101 CDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred CcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 222222234445555554 36789999999999999999987
|
|
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=81.54 E-value=2.7 Score=37.80 Aligned_cols=90 Identities=27% Similarity=0.352 Sum_probs=59.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHH----HHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhcc
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLA----IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 242 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~----~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~ 242 (447)
|++-+++.|..-++.|=+++.+||+.+- +++.+++...|. ++. .. +|+.-
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~-~m~-pv------------------------~f~Gd 168 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHIT-NMN-PV------------------------IFAGD 168 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccC-CCc-ce------------------------eeccC
Confidence 5666778888888999999999999864 455666666663 211 11 23332
Q ss_pred Ch-hhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCe-eEEe
Q 013242 243 FP-EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAV 283 (447)
Q Consensus 243 ~p-~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~v-GIa~ 283 (447)
.| ..++.-..++|.++ .-+.-||+-||+.|-+.|++ ||-+
T Consensus 169 k~k~~qy~Kt~~i~~~~-~~IhYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 169 KPKPGQYTKTQWIQDKN-IRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred CCCcccccccHHHHhcC-ceEEecCCchhhhHHHhcCccceeE
Confidence 22 11223344566555 44678999999999999986 4554
|
|
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=80.90 E-value=6.2 Score=37.63 Aligned_cols=134 Identities=15% Similarity=0.135 Sum_probs=68.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCC-cc--hhhhhcCChhHHHhhccchhc
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQ-DR--DESIVALPVDELIEKADGFAG 241 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~v~a~ 241 (447)
-.+|+++.+.++.|++.+|.+.+.|+.=-....++.++-|...+.. .++... .. +..+.... ++++ +
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv--~VvSN~M~Fd~~g~l~gF~-~~lI---H---- 158 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNV--KVVSNFMDFDEDGVLVGFK-GPLI---H---- 158 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTE--EEEEE-EEE-TTSBEEEE--SS----------
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCe--EEEeeeEEECCcceEeecC-CCce---E----
Confidence 3589999999999999999999999988888888888887543211 011000 00 00000000 0000 0
Q ss_pred cChhhHHH--H--HHHHhh--cCCEEEEEcCCCCchhHHhhc---CeeEEec--Cc-----hHHHHhhcchhccCCChhH
Q 013242 242 VFPEHKYE--I--VKHLQA--RNHICGMIGNGVNDAPALKKA---DIGIAVA--DA-----TDAARSAADIVLTEPGLNV 305 (447)
Q Consensus 242 ~~p~~K~~--i--V~~lq~--~g~~v~~iGDg~ND~~al~~A---~vGIa~~--~a-----~~~a~~aAD~vl~~~~~~~ 305 (447)
+-.|-+ + ....++ ....|+..||+.-|+.|-.-. +.-+.+| |. -+.-.++=|+|+.++.--.
T Consensus 159 --~~NKn~~~l~~~~~~~~~~~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~tm~ 236 (246)
T PF05822_consen 159 --TFNKNESALEDSPYFKQLKKRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQTMD 236 (246)
T ss_dssp --TT-HHHHHHTTHHHHHCTTT--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B-H
T ss_pred --EeeCCcccccCchHHHHhccCCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCCCch
Confidence 001111 0 011222 245799999999999998665 3344444 32 2234568899999876444
Q ss_pred HHHHH
Q 013242 306 IITAV 310 (447)
Q Consensus 306 i~~~i 310 (447)
++..|
T Consensus 237 v~~~i 241 (246)
T PF05822_consen 237 VPNAI 241 (246)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44433
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 447 | ||||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 1e-132 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 8e-52 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 3e-19 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 3e-19 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 3e-19 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 5e-19 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 1e-11 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 9e-11 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 4e-10 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 2e-08 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 1e-06 | ||
| 2o98_P | 52 | Structure Of The 14-3-3 H+-Atpase Plant Complex Len | 1e-06 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 1e-06 | ||
| 3m50_P | 31 | Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY E | 2e-05 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 3e-04 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 3e-04 |
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|2O98|P Chain P, Structure Of The 14-3-3 H+-Atpase Plant Complex Length = 52 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|3M50|P Chain P, Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY EPIBESTAT Length = 31 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 447 | |||
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 1e-160 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 4e-04 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 1e-145 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 1e-50 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 4e-50 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 2e-44 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 6e-30 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 1e-29 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 1e-27 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 2e-27 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 7e-27 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 3e-26 | |
| 2o98_P | 52 | H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, | 3e-22 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 9e-13 | |
| 3m50_P | 31 | N.plumbaginifolia H+-translocating ATPase mRNA; al | 2e-11 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 3e-07 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 7e-07 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 1e-06 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 1e-06 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 1e-06 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 2e-06 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 2e-06 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 3e-06 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 3e-06 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 4e-06 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 4e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-05 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 1e-04 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 2e-04 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 2e-04 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 2e-04 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 3e-04 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 8e-04 |
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 474 bits (1223), Expect = e-160
Identities = 244/323 (75%), Positives = 280/323 (86%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGML 60
MDVLC DKTGTLTLNKL+VDKNL+E+F GV+ D V+L AA AS+VEN D IDAA+VGML
Sbjct: 323 MDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDAIDAAMVGML 382
Query: 61 ADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRK 120
ADPKEARA I+EVHFLPF+P KRTALTYID G HRV+KG+PEQIL L + + +K
Sbjct: 383 ADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKASNDLSKK 442
Query: 121 VNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALS 180
V ++I+K+AERGLRSLAVA Q VPE +KES G+PW+F+GL+PLFDPP HDSAETIRRAL+
Sbjct: 443 VLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGLLPLFDPPRHDSAETIRRALN 502
Query: 181 LGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240
LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL G +D ++ ++PV+ELIEKADGFA
Sbjct: 503 LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFA 562
Query: 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 300
GVFPEHKYEIVK LQ R HI GM G+GVNDAPALKKADIGIAVADATDAAR A+DIVLTE
Sbjct: 563 GVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTE 622
Query: 301 PGLNVIITAVLISRAIFQRMRNY 323
PGL+VII+AVL SRAIFQRM+NY
Sbjct: 623 PGLSVIISAVLTSRAIFQRMKNY 645
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 4e-04
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 356 QTAFTSKKDFGKEERELLWAHAQRTLH 382
+TAFT KKD+GKEERE W H
Sbjct: 857 KTAFTMKKDYGKEEREAQWMRGSHHHH 883
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 435 bits (1122), Expect = e-145
Identities = 133/334 (39%), Positives = 191/334 (57%), Gaps = 21/334 (6%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVEN--LDVIDAAIVG 58
+++LC DKTGTLT NKL++ GVD + ++L A A+ + +D ID A +
Sbjct: 372 VEILCSDKTGTLTKNKLSLHDPYT---VAGVDPEDLMLTACLAASRKKKGIDAIDKAFLK 428
Query: 59 MLADPKEARADIQE---VHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKS 115
L A++ + + + F PFDP K+ +G+ KG+P +L +
Sbjct: 429 SLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEEDH 488
Query: 116 KIG----RKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDS 171
I + + +FA RG RSL VA + W+ +G++P DPP HD+
Sbjct: 489 PIPEEVDQAYKNKVAEFATRGFRSLGVARKRG--------EGSWEILGIMPCMDPPRHDT 540
Query: 172 AETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 231
+T+ A +LGL +KM+TGD + IA+ET R+LG+GTN+Y + L + + V +
Sbjct: 541 YKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGGD-MPGSEVYD 599
Query: 232 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAAR 291
+E ADGFA VFP+HKY +V+ LQ R ++ M G+GVNDAP+LKKAD GIAV ++DAAR
Sbjct: 600 FVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVEGSSDAAR 659
Query: 292 SAADIVLTEPGLNVIITAVLISRAIFQRMRNYMV 325
SAADIV PGL II A+ SR IF RM Y+V
Sbjct: 660 SAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVV 693
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 183 bits (467), Expect = 1e-50
Identities = 95/399 (23%), Positives = 145/399 (36%), Gaps = 83/399 (20%)
Query: 3 VLCCDKTGTLTLNKLTV-----DKNLIEIFAGGVDA----------------------DT 35
V+C DKTGTLT N++TV D ++ +
Sbjct: 382 VICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRA 441
Query: 36 VVLMAARASQVENLDVI----DAAIVGM----LADPKEARADIQEVHFLPFDPTGKR--T 85
A V VI + A++ L + R +V +PF+ T K +
Sbjct: 442 AFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLS 501
Query: 86 ALTYIDSEGKMHRV-TKGSPEQILN-----LLHNKSK-----IGRKVNAVINKFAERGLR 134
T D H + KG+PE++L L+ + G R
Sbjct: 502 IHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGER 561
Query: 135 SLAVAYQEVPEGSKESSGSPWQ-----------FIGLIPLFDPPIHDSAETIRRALSLGL 183
L + E + F GL+ + DPP + + + + G+
Sbjct: 562 VLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGI 621
Query: 184 GVKMITGDQ----LAIAKETG-------RRLGMGTNMYPSSALSGQDRDESIV------- 225
V M+TGD AIA G + + + + V
Sbjct: 622 RVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLK 681
Query: 226 ALPVDELIEKADG-----FAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 280
+ EL+E FA P+ K IV+ Q I + G+GVND+PALKKADIG
Sbjct: 682 DMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIG 741
Query: 281 IAVADA-TDAARSAADIVLTEPGLNVIITAVLISRAIFQ 318
+A+ A +DAA++AAD++L + I+T V R IF
Sbjct: 742 VAMGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFD 780
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 182 bits (463), Expect = 4e-50
Identities = 90/403 (22%), Positives = 147/403 (36%), Gaps = 91/403 (22%)
Query: 3 VLCCDKTGTLTLNKLTVDKNLIEIFAGG--VDADTVVLMAARASQVENLDVIDAAIVGML 60
+C DKTGTLT N++TV ++ +ADT + A + + + L
Sbjct: 377 TICSDKTGTLTQNRMTVAH----MWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAAL 432
Query: 61 A-------------------------------------DPKEARADIQEVHFLPFDPTGK 83
+ R ++ +PF+ T K
Sbjct: 433 CNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNK 492
Query: 84 R--TALTYIDSEGKMHRV-TKGSPEQILN-----LLHNKSK-----IGRKVNAVINKFAE 130
+ S + + KG+PE+IL+ LL+ + + +
Sbjct: 493 YQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGG 552
Query: 131 RGLRSLAVAYQEVPEGSKESSGSPWQ-----------FIGLIPLFDPPIHDSAETIRRAL 179
G R L + +PE F+GL+ + DPP + + +
Sbjct: 553 LGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCR 612
Query: 180 SLGLGVKMITGDQ----LAIAKETG-------RRLGMGTNMYPSSALSGQDRDESIV--- 225
S G+ V M+TGD AIAK G + + ++ V
Sbjct: 613 SAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHG 672
Query: 226 ----ALPVDELIEKADG-----FAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKK 276
L + L + FA P+ K IV+ Q + I + G+GVND+PALKK
Sbjct: 673 SDLKDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKK 732
Query: 277 ADIGIAVADA-TDAARSAADIVLTEPGLNVIITAVLISRAIFQ 318
ADIG+A+ + +D ++ AAD++L + I+T V R IF
Sbjct: 733 ADIGVAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFD 775
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 165 bits (420), Expect = 2e-44
Identities = 82/279 (29%), Positives = 132/279 (47%), Gaps = 36/279 (12%)
Query: 76 LPFDPTGKRTALTYIDSEGKMHRV-----TKGSPEQILNLLHNKSKIG----------RK 120
L F K ++ ++ V KG+PE +++ + K
Sbjct: 486 LEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEK 545
Query: 121 VNAVINKF--AERGLRSLAVAYQEVPEGSKESSGSPWQ----------FIGLIPLFDPPI 168
+ +VI ++ LR LA+A ++ P +E F+G++ + DPP
Sbjct: 546 ILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPR 605
Query: 169 HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSS--ALSGQDRDESIVA 226
+ +I+ G+ V MITGD A RR+G+ + A +G++ D
Sbjct: 606 KEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFD----D 661
Query: 227 LPVDELIEKADG---FAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 283
LP+ E E FA V P HK +IV++LQ+ + I M G+GVNDAPALKKA+IGIA+
Sbjct: 662 LPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM 721
Query: 284 ADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRN 322
T A++A+++VL + + I+ AV RAI+ M+
Sbjct: 722 GSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQ 760
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 6e-30
Identities = 34/166 (20%), Positives = 70/166 (42%), Gaps = 30/166 (18%)
Query: 156 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL 215
+ I + D P + + + + + GL + +++GD+ KE + L
Sbjct: 126 EPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELN----------- 174
Query: 216 SGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALK 275
+ E + + PE K I++ L+ + MIG+GVNDA AL
Sbjct: 175 -------------IQEYY------SNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALA 215
Query: 276 KADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMR 321
AD+ +A+ + D +++ ADI+L + ++ + + + +
Sbjct: 216 LADVSVAMGNGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIP 261
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 1e-29
Identities = 82/324 (25%), Positives = 126/324 (38%), Gaps = 73/324 (22%)
Query: 2 DVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAA---RASQVENLDVIDAAIVG 58
+ DKTGTLT + V +I D ++ +AA S+ I AAIV
Sbjct: 14 QAVIFDKTGTLTEGRFGV----TDIVGFNHSEDELLQIAASLEARSE----HPIAAAIV- 64
Query: 59 MLADPKEARADIQEVHFLPFD-PTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKI 117
+ ++ + EV F GK G R SP + ++
Sbjct: 65 --EEAEKRGFGLTEVE--EFRAIPGKGVEGIV---NG--RRYMVVSP----GYI---REL 108
Query: 118 GRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRR 177
G K + + K ++G + + + G+I L D +S E I +
Sbjct: 109 GIKTDESVEKLKQQGKTVVFILKNG-------------EVSGVIALADRIRPESREAISK 155
Query: 178 ALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 237
++G+ M+TGD +AK LG +D+
Sbjct: 156 LKAIGIKCMMLTGDNRFVAKWVAEELG------------------------LDDYF---- 187
Query: 238 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 297
A V P K E VK +Q + ++ M+G+GVNDAPAL +AD+GIA+ TD A ADIV
Sbjct: 188 --AEVLPHEKAEKVKEVQQK-YVTAMVGDGVNDAPALAQADVGIAIGAGTDVAVETADIV 244
Query: 298 LTEPGLNVIITAVLISRAIFQRMR 321
L + V +SR + +
Sbjct: 245 LVRNDPRDVAAIVELSRKTYSKFH 268
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 1e-27
Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 31/166 (18%)
Query: 156 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL 215
+ G+I + D + ++ +G+ V MITGD A+ R L
Sbjct: 153 RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN----------- 201
Query: 216 SGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALK 275
+D +I A V P K E VK LQA+ + +G+G+NDAPAL
Sbjct: 202 -------------LDLVI------AEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALA 241
Query: 276 KADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMR 321
+AD+GIAV +D A + DIVL L ++ A+ +SR +++
Sbjct: 242 QADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 2e-27
Identities = 50/167 (29%), Positives = 72/167 (43%), Gaps = 33/167 (19%)
Query: 156 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL 215
+ + L+ + DP + ETI G+ + M+TGD A+ LG
Sbjct: 544 KTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLG----------- 592
Query: 216 SGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALK 275
+ +++ A + PE K IV L+ + I M G+GVNDAPAL
Sbjct: 593 -------------IKKVV------AEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALA 633
Query: 276 KADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRN 322
KADIGIA+ TD A +A + L L I A +S + M N
Sbjct: 634 KADIGIAMGTGTDVAIESAGVTLLHGDLRGIAKARRLSEST---MSN 677
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 112 bits (283), Expect = 7e-27
Identities = 75/327 (22%), Positives = 121/327 (37%), Gaps = 78/327 (23%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDV--IDAAIVG 58
+ + DKTGTLT K V ++ D ++ +AA E I AIV
Sbjct: 404 VTAVIFDKTGTLTKGKPEV----TDLVPLNGDERELLRLAA---IAERRSEHPIAEAIVK 456
Query: 59 MLADPKEARADIQEVHFLPFD-PTGKRTALTYIDSEG-KMHRVTKGSPEQILNLLHNKS- 115
+ + ++ + G+ G + G+ L+ +
Sbjct: 457 KALEHGIELGEPEK-----VEVIAGE----------GVVADGILVGNK----RLMEDFGV 497
Query: 116 KIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETI 175
+ +V + K ++ VA + G+I + D + +
Sbjct: 498 AVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAVSDTLKESAKPAV 544
Query: 176 RRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEK 235
+ +G+ V MITGD A+ R L +D +I
Sbjct: 545 QELKRMGIKVGMITGDNWRSAEAISRELN------------------------LDLVI-- 578
Query: 236 ADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAAD 295
A V P K E VK LQA+ + +G+G+NDAPAL +AD+GIAV +D A + D
Sbjct: 579 ----AEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGD 633
Query: 296 IVLTEPGLNVIITAVLISRAIFQRMRN 322
IVL L ++ A+ +SR M
Sbjct: 634 IVLIRDDLRDVVAAIQLSRKT---MSK 657
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 3e-26
Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 31/166 (18%)
Query: 156 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL 215
+ G+I + D + ++ +G+ V MITGD A+ R L
Sbjct: 447 RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN----------- 495
Query: 216 SGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALK 275
+D +I A V P K E VK LQA+ + +G+G+NDAPAL
Sbjct: 496 -------------LDLVI------AEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALA 535
Query: 276 KADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMR 321
+AD+GIAV +D A + DIVL L ++ A+ +SR +++
Sbjct: 536 QADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 581
|
| >2o98_P H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, electrochemical proton G cell turgor, regulation, protein binding; HET: FSC; 2.70A {Nicotiana plumbaginifolia} Length = 52 | Back alignment and structure |
|---|
Score = 88.2 bits (218), Expect = 3e-22
Identities = 36/52 (69%), Positives = 47/52 (90%)
Query: 396 SSYGELSWMAEEARRRAEIARLRELHTLKGHVESLIRLKGLDIDAIQQSYSV 447
+++ EL+ +AEEA+RRAEIAR RELHTLKGHVES+++LKGLDI+ IQQSY +
Sbjct: 1 TNFNELNQLAEEAKRRAEIARQRELHTLKGHVESVVKLKGLDIETIQQSYDI 52
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 65.3 bits (160), Expect = 9e-13
Identities = 32/155 (20%), Positives = 65/155 (41%), Gaps = 17/155 (10%)
Query: 30 GVDADTVVLMAARAS--QVENLDVIDAAIV--GMLADPKEARADIQEVHFLPFDPTGKRT 85
G ++ V+ A S Q +++D A++ + + Q++ +PFD +R
Sbjct: 12 GKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRRM 71
Query: 86 ALTYIDSEGKMHRVTKGSPEQILNL---LHNKSKIG-------RKVNAVINKFAERGLRS 135
++ ++ V KG+ ++ILN+ + + +I RK+ V + +GLR
Sbjct: 72 SVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRV 131
Query: 136 LAVAYQEVPEGSKESSGSPWQ---FIGLIPLFDPP 167
+AVA + +P + + G I D
Sbjct: 132 VAVATKYLPAREGDYQRADESDLILEGYIAFLDHH 166
|
| >3m50_P N.plumbaginifolia H+-translocating ATPase mRNA; all helical, protein-protein complex, protein binding; HET: EBT; 2.60A {Nicotiana plumbaginifolia} PDB: 3m51_P* Length = 31 | Back alignment and structure |
|---|
Score = 57.6 bits (139), Expect = 2e-11
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 418 RELHTLKGHVESLIRLKGLDIDAIQQSYSV 447
RELHTLKGHVE++++LKGLDI+ IQQSY +
Sbjct: 2 RELHTLKGHVEAVVKLKGLDIETIQQSYDI 31
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} Length = 168 | Back alignment and structure |
|---|
Score = 49.4 bits (119), Expect = 3e-07
Identities = 14/62 (22%), Positives = 22/62 (35%), Gaps = 4/62 (6%)
Query: 245 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 300
K V + + +GN V+D LK+ + ADA A+ A +
Sbjct: 82 SDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADACSGAQKAVGYICKC 141
Query: 301 PG 302
G
Sbjct: 142 SG 143
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} Length = 176 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 7e-07
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 245 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 300
+ K +K I +GN VND P +AVA A D R AA V T
Sbjct: 85 DRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTTV 144
Query: 301 PG 302
PG
Sbjct: 145 PG 146
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* Length = 164 | Back alignment and structure |
|---|
Score = 47.5 bits (114), Expect = 1e-06
Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
Query: 245 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 300
K + L I IG+ +NDA LK+ I A A R + I L +
Sbjct: 78 VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLSTIFLEK 137
Query: 301 PG 302
G
Sbjct: 138 RG 139
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* Length = 188 | Back alignment and structure |
|---|
Score = 47.9 bits (115), Expect = 1e-06
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 245 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 300
+K L + I +G+ + D P ++K + +AVADA AD V
Sbjct: 100 SNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRI 159
Query: 301 PG 302
G
Sbjct: 160 AG 161
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} Length = 162 | Back alignment and structure |
|---|
Score = 47.5 bits (114), Expect = 1e-06
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Query: 245 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 300
K EI + ++ + + G IG+ V D +KK +AV +A + R A +
Sbjct: 83 YKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVAVYITQR 142
Query: 301 PG 302
G
Sbjct: 143 NG 144
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* Length = 180 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 2e-06
Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
Query: 245 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 300
K L + + IG+ D PA AVADA ++A D VL+
Sbjct: 82 LEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLST 141
Query: 301 PG 302
G
Sbjct: 142 HG 143
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} Length = 191 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 2e-06
Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Query: 245 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 300
K +HL+ + IG+ + D P +++ +G+AV++A AD
Sbjct: 93 VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTER 152
Query: 301 PG 302
G
Sbjct: 153 TG 154
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A Length = 189 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 3e-06
Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Query: 245 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 300
E K ++ L A + +G+ + D P +++ +G+AVA+A R A +
Sbjct: 93 EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAASFVREHAHGITRA 152
Query: 301 PG 302
G
Sbjct: 153 QG 154
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} Length = 211 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 3e-06
Identities = 15/62 (24%), Positives = 21/62 (33%), Gaps = 4/62 (6%)
Query: 245 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 300
K L A IG+ + D P + + + +AVADA A V
Sbjct: 123 SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKAHYVTRI 182
Query: 301 PG 302
G
Sbjct: 183 KG 184
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} Length = 195 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 4e-06
Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 245 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 300
+ K + + + I G IG+ + D P ++K + + VAD A+ V
Sbjct: 99 DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLLAQRANYVTHI 158
Query: 301 PG 302
G
Sbjct: 159 KG 160
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 4e-05
Identities = 24/132 (18%), Positives = 38/132 (28%), Gaps = 7/132 (5%)
Query: 152 GSPWQFIGLIPLFDPPIHDSA-ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY 210
S + I L D I + E + + +I+G + +Y
Sbjct: 62 SSLKEEITSFVLEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIY 121
Query: 211 PSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVND 270
+ A D G K ++ L N MIG+ V D
Sbjct: 122 CNHASFDNDYIHIDWPHSCKGTCSNQCGCC------KPSVIHELSEPNQYIIMIGDSVTD 175
Query: 271 APALKKADIGIA 282
A K +D+ A
Sbjct: 176 VEAAKLSDLCFA 187
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 45.2 bits (106), Expect = 4e-05
Identities = 46/309 (14%), Positives = 83/309 (26%), Gaps = 97/309 (31%)
Query: 210 YP--SSALSGQDRDESIVALPVDELIEKADGFAG---VFPEHKYEIV---KHLQARNH-- 259
Y S + + R S + IE+ D VF KY + +L+ R
Sbjct: 91 YKFLMSPIKTEQRQPS---MMTRMYIEQRDRLYNDNQVFA--KYNVSRLQPYLKLRQALL 145
Query: 260 ---------ICGMIGNG--------VNDAPALKKADIGI---AVADATDAARSAADIVLT 299
I G++G+G K D I + + S ++
Sbjct: 146 ELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKN----CNSPETVLEM 201
Query: 300 EPGLNVIITAVLISRA------------IFQRMRNYMVRG--------IDGLSSTEFIQV 339
L I SR+ I +R + + + + +
Sbjct: 202 LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNA 261
Query: 340 LELN--FLFTLDTVIAILQTAFTSKKDF--GKEERELLWAHAQRTLHGLQPPDT-SMFS- 393
L+ L T T F DF + H L P + S+
Sbjct: 262 FNLSCKILLT---------TRFKQVTDFLSAATTTHISLDHHSM---TLTPDEVKSLLLK 309
Query: 394 -VRSSYGELSWMAEEARRR-----AEI-ARLRE--------LHTLKGHVESLIR--LKGL 436
+ +L E + I +R+ H + ++I L L
Sbjct: 310 YLDCRPQDLP---REVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVL 366
Query: 437 DIDAIQQSY 445
+ ++ +
Sbjct: 367 EPAEYRKMF 375
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 1e-04
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 242 VFPEHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 297
+F K E++ LQ +I ++G+G ND K A I IA +A + + A
Sbjct: 138 MFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHC 196
Query: 298 LTEPGLNVII 307
+ EP L +I
Sbjct: 197 INEPDLALIK 206
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 2e-04
Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 242 VFPEHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 297
V + K +I+ L + + +G+G ND + A +G+A A + A
Sbjct: 241 VSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTA 299
Query: 298 LTEPGLNVII 307
+ GL ++
Sbjct: 300 VRFAGLGGVV 309
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 2e-04
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Query: 242 VFPEHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 297
+ K EI++ + I +G+G ND KKA + IA A + ADI
Sbjct: 139 LKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADIC 197
Query: 298 LTEPGLNVII 307
+ + L I+
Sbjct: 198 IEKRDLREIL 207
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A Length = 227 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 2e-04
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 264 IGNGVNDAPALKKADIGIAVADATDAARSAADIV 297
IG+ ND P + A+ATD ++ +D V
Sbjct: 175 IGDSNNDMPMFQLPVRKACPANATDNIKAVSDFV 208
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 3e-04
Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 242 VFPEHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 297
+ +K + + L AR +I G+G ND P L+ A GIA A R
Sbjct: 242 MNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQ 300
Query: 298 LTEPGLNVII 307
+ G +++
Sbjct: 301 INYHGFELLL 310
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 Length = 231 | Back alignment and structure |
|---|
Score = 39.8 bits (94), Expect = 8e-04
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 264 IGNGVNDAPALKKADIGIAVADATDAARSAADIV 297
+G+G ND A K +AVA A + AD V
Sbjct: 175 VGDGENDLDAFKVVGYKVAVAQAPKILKENADYV 208
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 447 | |||
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.95 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.95 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.95 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.85 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.75 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.57 | |
| 2o98_P | 52 | H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, | 99.54 | |
| 3m50_P | 31 | N.plumbaginifolia H+-translocating ATPase mRNA; al | 99.5 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.47 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.46 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.43 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.43 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 99.4 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.38 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.34 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.34 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.33 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.31 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.27 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.26 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.25 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.25 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.23 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.21 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.2 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.19 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.13 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.13 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.12 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 99.11 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.1 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.09 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.08 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 99.06 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.05 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.01 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 99.0 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.92 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.91 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.91 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.91 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.88 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.88 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.87 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.84 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.83 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 98.78 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.77 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.75 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.74 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.73 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.73 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.71 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.71 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.7 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.7 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.67 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.66 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.66 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.64 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.58 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.57 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 98.56 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.55 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.53 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.53 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.52 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.52 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.51 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.5 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 98.49 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 98.49 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 98.48 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.48 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.47 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.47 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 98.46 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.44 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.44 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.43 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.43 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.41 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 98.4 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 98.39 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 98.38 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 98.36 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 98.35 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 98.32 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 98.31 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 98.27 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 98.26 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 98.26 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 98.26 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 98.24 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 98.23 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 98.23 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 98.23 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 98.22 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 98.22 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 98.21 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 98.18 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 98.15 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 98.14 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 98.13 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 98.09 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 98.06 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 98.0 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.9 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.89 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.87 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 97.86 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 97.82 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 97.81 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 97.79 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 97.74 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 97.68 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 97.64 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 97.62 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 97.6 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 97.54 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 97.52 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 97.4 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 97.34 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 97.34 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 97.33 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 97.25 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 97.24 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 97.16 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 97.15 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 97.14 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 97.08 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 97.07 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 97.0 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 96.95 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 96.55 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 96.54 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 96.43 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 96.31 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 96.29 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 96.15 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 95.43 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 95.37 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 95.18 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 94.87 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 94.33 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 94.1 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 93.74 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 93.54 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 92.72 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 92.19 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 90.78 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 90.26 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 88.02 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 86.06 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 85.62 | |
| 2jc9_A | 555 | Cytosolic purine 5'-nucleotidase; cytosolic 5-prim | 80.85 |
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-66 Score=571.21 Aligned_cols=354 Identities=69% Similarity=1.068 Sum_probs=309.9
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCchhhhccceEEEEEecCC
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDP 80 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~~~~~pF~~ 80 (447)
||+||||||||||+|+|+|.+.+++.+..+.++++++.+++.++...+.||++.|++.++.++.+.+.+++.++.+||+|
T Consensus 323 v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ll~~aa~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~pF~s 402 (885)
T 3b8c_A 323 MDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNP 402 (885)
T ss_dssp CCCCEEECCCCCSCCCCCCCSCCCCSSCSSTTHHHHHHHHHHHCCSSSCCSHHHHHHHTTCCTTCCCCSSCCBCCCCCCT
T ss_pred CCEEEECCCCCcccCceEEEEEEEeccCCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHhhchhhHhhcCceeecccCCc
Confidence 68999999999999999998654444555778889999999998765678999999998877655667788899999999
Q ss_pred CCceEEEEEEecCCeEEEEEcCcHHHHHhhccCChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEEEEe
Q 013242 81 TGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGL 160 (447)
Q Consensus 81 ~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~lG~ 160 (447)
.+|+|++++++.+|+.+.++||+|+.|+++|..+.+.++.+.+.+++|+++|+|++++|++.+++.+.+..|++++|+|+
T Consensus 403 ~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~~~~~e~~l~~lGl 482 (885)
T 3b8c_A 403 VDKRTALTYIDGSGNWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGL 482 (885)
T ss_dssp TTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCCSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSSSSSCCCCCCCCCEE
T ss_pred ccceEEEEEEecCCcEEEEEeCCHHHHHHhccCchhhHHHHHHHHHHHHhCCCeEEEEEEeccccccccccccCcEEEEE
Confidence 99999998887778888999999999999998666666778888999999999999999999987777788999999999
Q ss_pred ccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchh
Q 013242 161 IPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240 (447)
Q Consensus 161 i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 240 (447)
++++|||||+++++|++|+++||+|+|+|||+..+|.++|+++||..+..+...+.|.+.+..+...+++++++++.+|+
T Consensus 483 i~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~a 562 (885)
T 3b8c_A 483 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFA 562 (885)
T ss_dssp EEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEE
T ss_pred EEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEE
Confidence 99999999999999999999999999999999999999999999987655566677766665566777889999999999
Q ss_pred ccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHH
Q 013242 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRM 320 (447)
Q Consensus 241 ~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~i 320 (447)
+++|+||.++|+.+|++|+.|+|+|||+||+|||+.||+||||+++++.++++||+|+.++++++|..++++||++|+||
T Consensus 563 rv~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni 642 (885)
T 3b8c_A 563 GVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRM 642 (885)
T ss_dssp CCCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCSSSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHH
T ss_pred EECHHHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEeCCccHHHHHhcceeeccCchhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH-hHHHHHHHHHHHhhcccccHHHHHHH
Q 013242 321 RNYMVRGI-DGLSSTEFIQVLELNFLFTLDTVIAI 354 (447)
Q Consensus 321 ~~~~~~~~-~~~~~~~~l~~~~~~~~~pl~~~~~l 354 (447)
++|+.|.+ .++..++.+....+.+.+|+.+++++
T Consensus 643 ~~~i~~~l~~n~~~~~~~~~~~~~~~~~l~p~~il 677 (885)
T 3b8c_A 643 KNYTIYAVSITIRIVFGFMLIALIWEFDFSAFMVL 677 (885)
T ss_dssp HHHHHHHHHHTTTTTSTTHHHHSSCSSCSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCcCcCHHHHH
Confidence 99999999 44322222222223444677777776
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-61 Score=527.78 Aligned_cols=340 Identities=40% Similarity=0.659 Sum_probs=280.5
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCCCC--ChHHHHHHHhhCCc---hhhhccceEEEE
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENL--DVIDAAIVGMLADP---KEARADIQEVHF 75 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~--~pi~~ai~~~~~~~---~~~~~~~~~~~~ 75 (447)
||+||||||||||+|+|+|.+++. ..+.++++++..++.++...+. ||++.|++.++... ......++.+++
T Consensus 372 v~vIc~DKTGTLT~n~m~v~~~~~---~~g~~~~~ll~~a~l~~~~~~~~~~P~e~Al~~~~~~~~~~~~~~~~~~~~~~ 448 (920)
T 1mhs_A 372 VEILCSDKTGTLTKNKLSLHDPYT---VAGVDPEDLMLTACLAASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQF 448 (920)
T ss_dssp CCEEEEETBTTTBSSCSCCCCCBC---CSCCCCTHHHHHHHHSCCCSSCSCCSHHHHHHHHHHHSSSCCGGGSCCCEEEE
T ss_pred CcEEEECCCCCccccceeEEEEee---cCCCCHHHHHHHHHHhcCCcccCCChHHHHHHHHHHhcccchhhccccceeEE
Confidence 689999999999999999988542 2356666777666666543333 79999999865321 123456889999
Q ss_pred EecCCCCceEEEEEEecCCeEEEEEcCcHHHHHhhccC----ChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCC
Q 013242 76 LPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN----KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESS 151 (447)
Q Consensus 76 ~pF~~~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~----~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~ 151 (447)
+||+|.+|+|+++++..+|+.+.++||+|+.|+++|.. +++..+.+.+.+++|+++|+|++++|++. .
T Consensus 449 ~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~--------~ 520 (920)
T 1mhs_A 449 HPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKR--------G 520 (920)
T ss_dssp EEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCS--------S
T ss_pred eeccCCCCeEEEEEEeCCCcEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEec--------c
Confidence 99999999999998877788889999999999999974 33456678888999999999999999984 2
Q ss_pred CCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC--cccccCCcchhhhhcCCh
Q 013242 152 GSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP--SSALSGQDRDESIVALPV 229 (447)
Q Consensus 152 e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~--~~~~~~~~~~~~~~~~~~ 229 (447)
|++|+|+|+++++|||||+++++|++|+++||+|+|+|||+..+|.++|+++||..+.+. ...+.|. +.+...++
T Consensus 521 e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~---~~~~~~el 597 (920)
T 1mhs_A 521 EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGG---GDMPGSEV 597 (920)
T ss_dssp SCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBC---CCGGGGGG
T ss_pred ccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCc---ccCCHHHH
Confidence 578999999999999999999999999999999999999999999999999999753221 1223333 22334455
Q ss_pred hHHHhhccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHH
Q 013242 230 DELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITA 309 (447)
Q Consensus 230 ~~~~~~~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~ 309 (447)
.+.++++.+|++++|+||.++|+.+|++|+.|+|+|||+||+|||+.||+||||+++++.++++||+|+.+++|++|..+
T Consensus 598 ~~~~~~~~V~arv~P~~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADiVl~~~~~~~I~~a 677 (920)
T 1mhs_A 598 YDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVEGSSDAARSAADIVFLAPGLGAIIDA 677 (920)
T ss_dssp GTTTTTTSCEESCCSTHHHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEETTSCHHHHHSSSEEESSCCSHHHHHH
T ss_pred HHHHhhCeEEEEeCHHHHHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCcccccccHHHHHhcCeEEcCCCHHHHHHH
Confidence 66777888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHhhcccccHHHHHHH
Q 013242 310 VLISRAIFQRMRNYMVRGI-DGLSSTEFIQVLELNFLFTLDTVIAI 354 (447)
Q Consensus 310 i~~~r~~~~~i~~~~~~~~-~~~~~~~~l~~~~~~~~~pl~~~~~l 354 (447)
+++||++|+||++|+.|.+ .++...+++.+..++..+|+.+++++
T Consensus 678 i~~gR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~l~~~~il 723 (920)
T 1mhs_A 678 LKTSRQIFHRMYAYVVYRIALSIHLEIFLGLWIAILNRSLNIELVV 723 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCCCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHH
Confidence 9999999999999999999 44444344433333344456666665
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-57 Score=508.40 Aligned_cols=353 Identities=26% Similarity=0.406 Sum_probs=278.0
Q ss_pred CcEEEecchhhcccCceEEEeeEeec--cc-CC-----------CCh--HHHHHHHHHhcCC------C---------CC
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEI--FA-GG-----------VDA--DTVVLMAARASQV------E---------NL 49 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~--~~-~~-----------~~~--~~~l~~a~~~~~~------~---------~~ 49 (447)
||+||||||||||+|+|+|.++++.. +. .+ .+. +.++..++.|+.. + ..
T Consensus 375 v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~g 454 (1028)
T 2zxe_A 375 TSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQAGQDNVPILKRSVAG 454 (1028)
T ss_dssp CCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHHHHHHHHHHSCCCEECTTCTTSCGGGSCEES
T ss_pred ceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCHHHHHHHHHHHhcCCCeeecCCCCCccccceeCC
Confidence 68999999999999999999876421 10 00 011 2566666666421 1 23
Q ss_pred ChHHHHHHHhhCC----chhhhccceEEEEEecCCCCceEEEEEEec---CCeEEEEEcCcHHHHHhhccC---------
Q 013242 50 DVIDAAIVGMLAD----PKEARADIQEVHFLPFDPTGKRTALTYIDS---EGKMHRVTKGSPEQILNLLHN--------- 113 (447)
Q Consensus 50 ~pi~~ai~~~~~~----~~~~~~~~~~~~~~pF~~~~kr~~v~~~~~---~g~~~~~~KGa~e~i~~~~~~--------- 113 (447)
||.|.|++.++.. ....+..++.++.+||+|.+|||+++++.. +|+++.++|||||.|+++|..
T Consensus 455 dp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~ 534 (1028)
T 2zxe_A 455 DASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEP 534 (1028)
T ss_dssp CHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEECBTTBCCB
T ss_pred CchHHHHHHHHHHhCCCHHHHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCCcHHHHHHhhhhhcCCCccc
Confidence 7889999987642 233456789999999999999999998863 577899999999999999962
Q ss_pred -ChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCc-----------CCCCCCcEEEEeccCCCCCCcchHHHHHHHHhC
Q 013242 114 -KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK-----------ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSL 181 (447)
Q Consensus 114 -~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~-----------~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~ 181 (447)
+++..+.+.+.+++|+++|+|||++|++.+++..+ +..|.+++|+|+++++|||||+++++|++|+++
T Consensus 535 l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~a 614 (1028)
T 2zxe_A 535 LKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSA 614 (1028)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccchhhhhhhhcCeEEEeeeccCCCCChhHHHHHHHHHHc
Confidence 34456778889999999999999999998865321 234789999999999999999999999999999
Q ss_pred CCeEEEEcCCcHHHHHHHHHHhCCCCCCCCc----------------------ccccCCcchhhhhcCChhHHHhhcc--
Q 013242 182 GLGVKMITGDQLAIAKETGRRLGMGTNMYPS----------------------SALSGQDRDESIVALPVDELIEKAD-- 237 (447)
Q Consensus 182 Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~-- 237 (447)
||+|+|+|||+..+|.++|+++||..+.... .++.|.+... +....+++++.++.
T Consensus 615 GI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~-~~~~~l~~~~~~~~~~ 693 (1028)
T 2zxe_A 615 GIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKD-LSTEVLDDILHYHTEI 693 (1028)
T ss_dssp TCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTT-CCHHHHHHHHHHCSEE
T ss_pred CCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhh-CCHHHHHHHHhhCCcE
Confidence 9999999999999999999999997432110 1111211110 11112334455554
Q ss_pred chhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEec-CchHHHHhhcchhccCCChhHHHHHHHHHHHH
Q 013242 238 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAI 316 (447)
Q Consensus 238 v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~-~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~ 316 (447)
+|++++|+||..+|+.+|+.|+.|+|+|||.||+|||+.||+||||| ++++.++++||+|+.++++++|.++|++||++
T Consensus 694 v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~~~~~~~I~~~i~~gR~i 773 (1028)
T 2zxe_A 694 VFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLI 773 (1028)
T ss_dssp EEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEEETTCCTHHHHHHHHHHHHH
T ss_pred EEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEEecCCCHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999 79999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-hHHHHHHHH-HHHhhcccccHHHHHHH
Q 013242 317 FQRMRNYMVRGI-DGLSSTEFI-QVLELNFLFTLDTVIAI 354 (447)
Q Consensus 317 ~~~i~~~~~~~~-~~~~~~~~l-~~~~~~~~~pl~~~~~l 354 (447)
|+|+++++.|.+ .++..++.. ...++...+|+.+++++
T Consensus 774 ~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~qil 813 (1028)
T 2zxe_A 774 FDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTIL 813 (1028)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHHHHHCCCCSSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhHHHHHH
Confidence 999999999999 443332222 22233456788888887
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-56 Score=504.88 Aligned_cols=353 Identities=24% Similarity=0.355 Sum_probs=278.5
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCC-----------C-----hHHHHHHHHHhcCC---------------CCC
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGV-----------D-----ADTVVLMAARASQV---------------ENL 49 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~-----------~-----~~~~l~~a~~~~~~---------------~~~ 49 (447)
||+||||||||||+|+|+|.++++....... + ...++..++.|+.. ...
T Consensus 380 v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~g 459 (1034)
T 3ixz_A 380 TSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIG 459 (1034)
T ss_pred CcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCHHHHHHHHHHHHhccceeccCcCCCcccCceecc
Confidence 6899999999999999999987653211000 0 12455555655422 123
Q ss_pred ChHHHHHHHhhC----CchhhhccceEEEEEecCCCCceEEEEEEec---CCeEEEEEcCcHHHHHhhcc----------
Q 013242 50 DVIDAAIVGMLA----DPKEARADIQEVHFLPFDPTGKRTALTYIDS---EGKMHRVTKGSPEQILNLLH---------- 112 (447)
Q Consensus 50 ~pi~~ai~~~~~----~~~~~~~~~~~~~~~pF~~~~kr~~v~~~~~---~g~~~~~~KGa~e~i~~~~~---------- 112 (447)
||.+.|++.+.. +....+..++.++.+||+|.+|+|++++... +|++.+++|||||.|+++|.
T Consensus 460 dp~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~ 539 (1034)
T 3ixz_A 460 DASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELP 539 (1034)
T ss_pred CchHHHHHHHHHHhCCChHHHHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEeCChHHHHHHhHHhhcCCceec
Confidence 789999988753 2334567889999999999999998877643 37789999999999999996
Q ss_pred CChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCc-----------CCCCCCcEEEEeccCCCCCCcchHHHHHHHHhC
Q 013242 113 NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK-----------ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSL 181 (447)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~-----------~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~ 181 (447)
.+++..+.+.+..++|+.+|+|||++|++.+++.+. +..|++++|+|+++++||||++++++|++|+++
T Consensus 540 l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~a 619 (1034)
T 3ixz_A 540 LDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTA 619 (1034)
T ss_pred CCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccchhhhhccccCcEEEEEEeccCCCchhHHHHHHHHHHc
Confidence 234566788999999999999999999998865421 235789999999999999999999999999999
Q ss_pred CCeEEEEcCCcHHHHHHHHHHhCCCCCCCC----------------------cccccCCcchhhhhcCChhHHHhhc--c
Q 013242 182 GLGVKMITGDQLAIAKETGRRLGMGTNMYP----------------------SSALSGQDRDESIVALPVDELIEKA--D 237 (447)
Q Consensus 182 Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~--~ 237 (447)
||+|+|+|||+..+|.++++++|+..+... ...+.|.... .+...++.+.+..+ .
T Consensus 620 GI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~-~~~~~~l~~~~~~~~~~ 698 (1034)
T 3ixz_A 620 GIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLK-DMDPSELVEALRTHPEM 698 (1034)
T ss_pred CCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhh-hCCHHHHHHHHHhCCce
Confidence 999999999999999999999999643211 0112222111 11111233344443 3
Q ss_pred chhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEec-CchHHHHhhcchhccCCChhHHHHHHHHHHHH
Q 013242 238 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAI 316 (447)
Q Consensus 238 v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~-~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~ 316 (447)
+|++++|+||.++|+.+|+.|+.|+|+|||.||+|||+.||+||||| ++++.+|++||+|+.++++++|..+|++||++
T Consensus 699 v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~~~gI~~ai~~GR~i 778 (1034)
T 3ixz_A 699 VFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLI 778 (1034)
T ss_pred EEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCEEeccCCchHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-hHHHHHHHHHH-HhhcccccHHHHHHH
Q 013242 317 FQRMRNYMVRGI-DGLSSTEFIQV-LELNFLFTLDTVIAI 354 (447)
Q Consensus 317 ~~~i~~~~~~~~-~~~~~~~~l~~-~~~~~~~pl~~~~~l 354 (447)
|+|+++++.|.+ .++..++..++ .++...+|+.++++|
T Consensus 779 ~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL 818 (1034)
T 3ixz_A 779 FDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITIL 818 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHH
Confidence 999999999999 44443333222 233456799999987
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-56 Score=503.40 Aligned_cols=353 Identities=28% Similarity=0.406 Sum_probs=277.7
Q ss_pred CcEEEecchhhcccCceEEEeeEeecc--------------cCCCCh-------------------HHHHHHHHHhcCCC
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIF--------------AGGVDA-------------------DTVVLMAARASQVE 47 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~--------------~~~~~~-------------------~~~l~~a~~~~~~~ 47 (447)
||+||||||||||+|+|+|.++++... ..+..+ ..++..++.|+...
T Consensus 346 v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~ 425 (995)
T 3ar4_A 346 TSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSS 425 (995)
T ss_dssp CCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCEEETTEECCGGGCHHHHHHHHHHHHSCCCE
T ss_pred ceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccCCCcCCccccccccccccccccHHHHHHHHHHHHcCCCc
Confidence 689999999999999999998764210 000110 12334445543221
Q ss_pred ------------CCChHHHHHHHhhCCc-------h-------------hhhccceEEEEEecCCCCceEEEEEEecCC-
Q 013242 48 ------------NLDVIDAAIVGMLADP-------K-------------EARADIQEVHFLPFDPTGKRTALTYIDSEG- 94 (447)
Q Consensus 48 ------------~~~pi~~ai~~~~~~~-------~-------------~~~~~~~~~~~~pF~~~~kr~~v~~~~~~g- 94 (447)
..+|.|.|++.++... . ..+..|+.++.+||+|.+|||+++++..+|
T Consensus 426 ~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~ 505 (995)
T 3ar4_A 426 LDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSS 505 (995)
T ss_dssp EEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSCC
T ss_pred ccccCCCCceeecCCccHHHHHHHHHHcCCccccccccccccccccchhhhhhhCceEEEeecCCCCCeeEEEEecCCCC
Confidence 1479999998654211 0 124568999999999999999999987666
Q ss_pred ----eEEEEEcCcHHHHHhhccC----------ChhhHHHHHHHHHHH--HHhhhhhhhhhhcccCCCC----------c
Q 013242 95 ----KMHRVTKGSPEQILNLLHN----------KSKIGRKVNAVINKF--AERGLRSLAVAYQEVPEGS----------K 148 (447)
Q Consensus 95 ----~~~~~~KGa~e~i~~~~~~----------~~~~~~~~~~~~~~~--~~~G~r~l~vA~~~~~~~~----------~ 148 (447)
+...|+||+||.|+++|.. +++..+.+.+.+++| +++|+|||++||+.++..+ +
T Consensus 506 ~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~~~~~~~~~~~ 585 (995)
T 3ar4_A 506 RAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRF 585 (995)
T ss_dssp SCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHSTTCCEEEEEEEESSCCCGGGCCTTCGGGH
T ss_pred ccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHHHHHhhhccceEEEEEEEecCccccccccccchhh
Confidence 5789999999999999962 234566788889999 9999999999999886432 2
Q ss_pred CCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--CcccccCCcchhhhhc
Q 013242 149 ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSALSGQDRDESIVA 226 (447)
Q Consensus 149 ~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~--~~~~~~~~~~~~~~~~ 226 (447)
+..|++++|+|+++++||+||+++++|+.|+++||+|+|+|||+..+|.++|+++||..... ...++.|.+.+. +..
T Consensus 586 ~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~-l~~ 664 (995)
T 3ar4_A 586 MEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDD-LPL 664 (995)
T ss_dssp HHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHT-SCH
T ss_pred hhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCcccceEEEchhhhh-CCH
Confidence 23478999999999999999999999999999999999999999999999999999975321 123333332211 111
Q ss_pred CChhHHHhhccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHH
Q 013242 227 LPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVI 306 (447)
Q Consensus 227 ~~~~~~~~~~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i 306 (447)
....+++.+..+|++++|+||.++|+.+|++|+.|+|+|||.||+|||+.||+||||+++++.++++||+|+.++++++|
T Consensus 665 ~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiamg~g~~~ak~aAd~vl~~~~~~~i 744 (995)
T 3ar4_A 665 AEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTI 744 (995)
T ss_dssp HHHHHHHHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEETTSCHHHHHTCSEEETTCCHHHH
T ss_pred HHHHHHHhhCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEEeCCCCHHHHHhCCEEECCCCHHHH
Confidence 22445667788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHH-HhhcccccHHHHHHH
Q 013242 307 ITAVLISRAIFQRMRNYMVRGI-DGLSSTEFIQV-LELNFLFTLDTVIAI 354 (447)
Q Consensus 307 ~~~i~~~r~~~~~i~~~~~~~~-~~~~~~~~l~~-~~~~~~~pl~~~~~l 354 (447)
..++++||++|+||++++.|.+ .++...+.+.+ .++.+..|+.+++++
T Consensus 745 ~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~~~pl~~~qil 794 (995)
T 3ar4_A 745 VAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLL 794 (995)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHH
Confidence 9999999999999999999999 54433322222 233345788888886
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-49 Score=430.62 Aligned_cols=312 Identities=25% Similarity=0.287 Sum_probs=260.8
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCchhhhccceEEEEEecCC
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDP 80 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~~~~~pF~~ 80 (447)
||+||||||||||+|+|+|.+++ ..+.+.++++.+++..+..++| |++.|++.++.+. ++......+|++
T Consensus 420 v~~i~fDKTGTLT~g~~~v~~i~----~~~~~~~~~l~~aa~le~~s~h-Pla~Aiv~~a~~~-----~~~~~~~~~f~~ 489 (736)
T 3rfu_A 420 VNTLVVDKTGTLTEGHPKLTRIV----TDDFVEDNALALAAALEHQSEH-PLANAIVHAAKEK-----GLSLGSVEAFEA 489 (736)
T ss_dssp CCEEEECCBTTTBCSSCEEEEEE----ESSSCHHHHHHHHHHHHHSSCC-HHHHHHHHHHHTT-----CCCCCCCSCCCC
T ss_pred CCEEEEeCCCCCcCCceEEEEEE----ecCCCHHHHHHHHHHHhhcCCC-hHHHHHHHHHHhc-----CCCccCcccccc
Confidence 68999999999999999999865 3467889999999888877665 9999999876532 222233457887
Q ss_pred CCceEEEEEEecCCeEEEEEcCcHHHHHhhccCChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEEEEe
Q 013242 81 TGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGL 160 (447)
Q Consensus 81 ~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~lG~ 160 (447)
..++..... .+|+ .+.+|+++.+.+..... ..+.+..++++++|+|++++|++. +++|+
T Consensus 490 ~~g~gv~~~--~~g~--~~~~G~~~~~~~~~~~~----~~~~~~~~~~~~~G~~vl~va~d~-------------~~~G~ 548 (736)
T 3rfu_A 490 PTGKGVVGQ--VDGH--HVAIGNARLMQEHGGDN----APLFEKADELRGKGASVMFMAVDG-------------KTVAL 548 (736)
T ss_dssp CTTTEEEEC--SSSS--CEEEESHHHHHHHCCCC----HHHHHHHHHHHHTTCEEEEEEETT-------------EEEEE
T ss_pred cCCceEEEE--ECCE--EEEEcCHHHHHHcCCCh----hHHHHHHHHHHhcCCeEEEEEECC-------------EEEEE
Confidence 777654322 3443 46689999987754322 245667789999999999999976 99999
Q ss_pred ccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchh
Q 013242 161 IPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240 (447)
Q Consensus 161 i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 240 (447)
++++|++|++++++|++|+++|++++|+|||+..++..+++++||+ .+++
T Consensus 549 i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~------------------------------~v~a 598 (736)
T 3rfu_A 549 LVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIK------------------------------KVVA 598 (736)
T ss_dssp EEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCC------------------------------CEEC
T ss_pred EEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC------------------------------EEEE
Confidence 9999999999999999999999999999999999999999999996 4689
Q ss_pred ccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHH
Q 013242 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRM 320 (447)
Q Consensus 241 ~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~i 320 (447)
+++|++|.++|+.+|++|+.|+|+|||.||+|||+.||+||||+++++.++++||+|+.++++++|..++++||++++||
T Consensus 599 ~~~P~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAmg~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i 678 (736)
T 3rfu_A 599 EIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMGTGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNI 678 (736)
T ss_dssp SCCHHHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEESSSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHH
T ss_pred ecCHHHHHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEEeCCccHHHHHhCCEEEccCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhccccc--HHHHHHHHHhcccCCcccchhHHHHH
Q 013242 321 RNYMVRGIDGLSSTEFIQVLELNFLFT--LDTVIAILQTAFTSKKDFGKEERELL 373 (447)
Q Consensus 321 ~~~~~~~~~~~~~~~~l~~~~~~~~~p--l~~~~~l~~~~~~~~~~~~~~~~~~~ 373 (447)
++|+.|++.++...+.+.++++++++. +.|+.-...+.+++..+..++.|...
T Consensus 679 ~qnl~~a~~yN~~~iplAag~l~p~~G~~l~P~~aa~~m~~Ssv~Vv~nslrl~~ 733 (736)
T 3rfu_A 679 RQNLFFAFIYNVLGVPLAAGVLYPLTGLLLSPMIAAAAMALSSVSVIINALRLKR 733 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSSTTTSSCCCCHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHhhHHHHHHHHHHhcc
Confidence 999999995555566666766665432 34554446777777777776665543
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-47 Score=412.63 Aligned_cols=304 Identities=25% Similarity=0.315 Sum_probs=241.0
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCchhhhccceEEEEEecCC
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDP 80 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~~~~~pF~~ 80 (447)
||++|||||||||+|+|+|.+++. .+.+.++++.+++.++..++| |++.|++.++.+.+......+..+..|
T Consensus 404 v~~i~fDKTGTLT~g~~~v~~~~~----~~~~~~~~l~~aa~~e~~s~h-P~~~Ai~~~a~~~~~~~~~~~~~~~~~--- 475 (723)
T 3j09_A 404 VTAVIFDKTGTLTKGKPEVTDLVP----LNGDERELLRLAAIAERRSEH-PIAEAIVKKALEHGIELGEPEKVEVIA--- 475 (723)
T ss_dssp CCEEEEEHHHHTSCSCCEEEEEEE----SSSCHHHHHHHHHHHHTTCCS-HHHHHHHHHHHHTTCCCCSCCCCEEET---
T ss_pred CCEEEEcCCCccccCceEEEEEEe----CCCCHHHHHHHHHHHhccCCC-chhHHHHHHHHhcCCCcCCccceEEec---
Confidence 689999999999999999998653 256888999999988887665 999999987643211111111111111
Q ss_pred CCceEEEEEEecCCeEEEEEcCcHHHHHhhccCChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEEEEe
Q 013242 81 TGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGL 160 (447)
Q Consensus 81 ~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~lG~ 160 (447)
++.. . ...+.+|+++.+.+... ..++.+.+..++++++|+|++++|++. +|+|+
T Consensus 476 --g~g~-~-------~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~va~~~-------------~~~G~ 529 (723)
T 3j09_A 476 --GEGV-V-------ADGILVGNKRLMEDFGV---AVSNEVELALEKLEREAKTAVIVARNG-------------RVEGI 529 (723)
T ss_dssp --TTEE-E-------ETTEEEECHHHHHHTTC---CCCHHHHHHHHHHHTTTCEEEEEEETT-------------EEEEE
T ss_pred --CCce-E-------EEEEEECCHHHHHhcCC---CccHHHHHHHHHHHhcCCeEEEEEECC-------------EEEEE
Confidence 1110 0 02467899988766432 234567788899999999999999875 99999
Q ss_pred ccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchh
Q 013242 161 IPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240 (447)
Q Consensus 161 i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 240 (447)
++++|++||+++++|+.|+++|++++|+|||+..++..+++++|++ .+|+
T Consensus 530 i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~------------------------------~~~~ 579 (723)
T 3j09_A 530 IAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------LVIA 579 (723)
T ss_dssp EEEECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------EEEC
T ss_pred EeecCCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCc------------------------------EEEc
Confidence 9999999999999999999999999999999999999999999996 5799
Q ss_pred ccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHH
Q 013242 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRM 320 (447)
Q Consensus 241 ~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~i 320 (447)
+++|++|.++|+.++++ +.|+|+|||.||+|||+.||+||||+++++.++++||+|+.++++++|..++++||++++|+
T Consensus 580 ~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i 658 (723)
T 3j09_A 580 EVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKI 658 (723)
T ss_dssp SCCTTCHHHHHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEECCCCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHhcC-CeEEEEECChhhHHHHhhCCEEEEeCCCcHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH-hHHHHHHHHHHHhhccc--ccHHHHHHHHHhcccCCcccchhHH
Q 013242 321 RNYMVRGI-DGLSSTEFIQVLELNFL--FTLDTVIAILQTAFTSKKDFGKEER 370 (447)
Q Consensus 321 ~~~~~~~~-~~~~~~~~l~~~~~~~~--~pl~~~~~l~~~~~~~~~~~~~~~~ 370 (447)
++|+.|++ +++. .+.+.++.++++ +.+.|+.-...+.+++..+..++.|
T Consensus 659 ~~nl~~a~~~n~~-~i~~a~~~~~~~~g~~l~p~~a~~~m~~ss~~vv~nslr 710 (723)
T 3j09_A 659 KQNIFWALIYNVI-LIPAAAGLLYPIFGVVFRPEFAGLAMAMSSVSVVANSLL 710 (723)
T ss_dssp HHHHHHHHHHHHH-HHHHHHHTTSSCCCCSCCHHHHHHHHHTHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHH-HHHHHHHhhhhccccccCHHHHHHHHhccHHHHHHHHHH
Confidence 99999999 5544 444444443332 1233333334455555555544443
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-47 Score=405.88 Aligned_cols=305 Identities=25% Similarity=0.304 Sum_probs=240.1
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCchhhhccceEEEEEecCC
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDP 80 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~~~~~pF~~ 80 (447)
||++|||||||||+|+|+|.+++. .+.+.++++.+++.++..++| |++.|++.++.+.+......+..+..|
T Consensus 326 v~~i~fDKTGTLT~~~~~v~~~~~----~~~~~~~~l~~aa~~e~~s~h-Pla~Aiv~~a~~~g~~~~~~~~~~~~~--- 397 (645)
T 3j08_A 326 VTAVIFDKTGTLTKGKPEVTDLVP----LNGDERELLRLAAIAERRSEH-PIAEAIVKKALEHGIELGEPEKVEVIA--- 397 (645)
T ss_dssp CCEEEEEGGGTSSSSCCEEEEEEE----SSSCHHHHHHHHHHHHTTCCS-HHHHHHHHHHHHTTCCCCSCCCCEEET---
T ss_pred CCEEEEcCcccccCCCeEEEEEEe----CCCCHHHHHHHHHHHhhcCCC-hhHHHHHHHHHhcCCCcCCccceEEec---
Confidence 689999999999999999998653 256888999999988887665 999999987643211111111111111
Q ss_pred CCceEEEEEEecCCeEEEEEcCcHHHHHhhccCChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEEEEe
Q 013242 81 TGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGL 160 (447)
Q Consensus 81 ~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~lG~ 160 (447)
++... ...+.+|+++.+.+... ..++.+.+..++++++|+|+++++++. +++|+
T Consensus 398 --g~g~~--------~~~v~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~l~va~~~-------------~~~G~ 451 (645)
T 3j08_A 398 --GEGVV--------ADGILVGNKRLMEDFGV---AVSNEVELALEKLEREAKTAVIVARNG-------------RVEGI 451 (645)
T ss_dssp --TTEEE--------ETTEEEECHHHHHHTTC---CCCHHHHHHHHHHHTTTCCCEEEEETT-------------EEEEE
T ss_pred --CCceE--------EEEEEECCHHHHHhcCC---CccHHHHHHHHHHHhcCCeEEEEEECC-------------EEEEE
Confidence 11100 02467899988766332 334567778889999999999999875 99999
Q ss_pred ccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchh
Q 013242 161 IPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240 (447)
Q Consensus 161 i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 240 (447)
++++|++||+++++|++|+++|++++|+|||+..++..+++++|++ .+|+
T Consensus 452 i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~------------------------------~~~~ 501 (645)
T 3j08_A 452 IAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------LVIA 501 (645)
T ss_dssp EEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------EEEC
T ss_pred EEecCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC------------------------------EEEE
Confidence 9999999999999999999999999999999999999999999996 5799
Q ss_pred ccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHH
Q 013242 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRM 320 (447)
Q Consensus 241 ~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~i 320 (447)
+++|++|.++++.++++ +.|+|+|||.||+|||+.||+||||+++++.++++||+|+.+++++++.+++++||++++|+
T Consensus 502 ~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i 580 (645)
T 3j08_A 502 EVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKI 580 (645)
T ss_dssp SCCTTCHHHHHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEECCCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHH
T ss_pred eCCHHhHHHHHHHHhhC-CeEEEEeCCHhHHHHHHhCCEEEEeCCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhccc--ccHHHHHHHHHhcccCCcccchhHH
Q 013242 321 RNYMVRGIDGLSSTEFIQVLELNFL--FTLDTVIAILQTAFTSKKDFGKEER 370 (447)
Q Consensus 321 ~~~~~~~~~~~~~~~~l~~~~~~~~--~pl~~~~~l~~~~~~~~~~~~~~~~ 370 (447)
++|+.|++.++...+.+.++.++++ +.+.|+.-...+.+++..+..++.|
T Consensus 581 ~~nl~~a~~~N~~~i~la~~~~~~~~g~~l~p~~a~~~m~~ss~~vv~nslr 632 (645)
T 3j08_A 581 KQNIFWALIYNVILIPAAAGLLYPIFGVVFRPEFAGLAMAMSSVSVVANSLL 632 (645)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTTTTCCCSCCHHHHHHHHHTHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhcccccCHHHHHHHHhcchHHHHHhhHH
Confidence 9999999933333444444443332 1223333334444555555444433
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=8.3e-34 Score=273.10 Aligned_cols=236 Identities=21% Similarity=0.308 Sum_probs=184.9
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCchhhhccceEEEEEecCC
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDP 80 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~~~~~pF~~ 80 (447)
||+||||||||||+|+|.|.+.. +.++++.+++..+..++| |++.|+..++.+.+......+....++-.+
T Consensus 28 i~~v~fDktGTLT~g~~~v~~~~--------~~~~~l~~~~~~e~~s~h-p~a~ai~~~~~~~g~~~~~~~~~~~~~G~g 98 (263)
T 2yj3_A 28 IDTIIFEKTGTLTYGTPIVTQFI--------GDSLSLAYAASVEALSSH-PIAKAIVKYAKEQGVKILEVKDFKEISGIG 98 (263)
Confidence 68999999999999999997632 556788888877776655 999999887643211000011111111000
Q ss_pred CCceEEEEEEecCCeEEEEEcCcHHHHHhhccCChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEEEEe
Q 013242 81 TGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGL 160 (447)
Q Consensus 81 ~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~lG~ 160 (447)
... . .++ ..+..|+++ +|.+ +.++++. .+.|.
T Consensus 99 ~~~----~---~~~--~~~~~G~~~-------------------------~~~~-~~~~~~~-------------~~~~~ 130 (263)
T 2yj3_A 99 VRG----K---ISD--KIIEVKKAE-------------------------NNND-IAVYING-------------EPIAS 130 (263)
Confidence 000 0 000 111122221 3445 6666665 88999
Q ss_pred ccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchh
Q 013242 161 IPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240 (447)
Q Consensus 161 i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 240 (447)
+.+.|+++|++.++|+.|++.|++++|+||++...+..+++++|+. .+|.
T Consensus 131 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~------------------------------~~f~ 180 (263)
T 2yj3_A 131 FNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQ------------------------------EYYS 180 (263)
Confidence 9999999999999999999999999999999999999999999985 3577
Q ss_pred ccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHH
Q 013242 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRM 320 (447)
Q Consensus 241 ~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~i 320 (447)
.+.|+.|..+++.++..+..|+|||||.||++|++.||+||+++++++.+...||+++..+++..+..++..+|+++++|
T Consensus 181 ~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g~~~~~~~~~ad~v~~~~~l~~l~~~l~~~r~~~~~i 260 (263)
T 2yj3_A 181 NLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMGNGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAI 260 (263)
Confidence 78899999999999999999999999999999999999999999988899999999999899999999999999999999
Q ss_pred HHH
Q 013242 321 RNY 323 (447)
Q Consensus 321 ~~~ 323 (447)
++|
T Consensus 261 ~~n 263 (263)
T 2yj3_A 261 PSN 263 (263)
Confidence 986
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-28 Score=235.36 Aligned_cols=263 Identities=30% Similarity=0.404 Sum_probs=199.0
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCchhhhccceEEEEEecCC
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDP 80 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~~~~~pF~~ 80 (447)
++.||||++||||.|+++|.++. .+. + +.++++.+++..+..+.+ ++..++..++...+........+..++..
T Consensus 13 ik~i~FD~DGTL~d~~~~v~~~~--~~~-~-~~~~~~~~~~~~~~~s~~-~~~~a~~~~~~~~g~~~~~~~~~~~~~g~- 86 (280)
T 3skx_A 13 LQAVIFDKTGTLTEGRFGVTDIV--GFN-H-SEDELLQIAASLEARSEH-PIAAAIVEEAEKRGFGLTEVEEFRAIPGK- 86 (280)
T ss_dssp CCEEEEECCCCCEEEEEEEEEEE--ESS-S-CHHHHHHHHHHHHTTCCS-HHHHHHHHHHHHTTCCCCCCEEEEEETTT-
T ss_pred CCEEEEeCCCcCCCCcEEEEEEE--ecC-C-CHHHHHHHHHHhhccCCC-HHHHHHHHHHHhcCCCCCCccceeecCCC-
Confidence 57899999999999999998854 232 3 888888888888776655 89999887764322111122223222211
Q ss_pred CCceEEEEEEecCCeEEEEEcCcHHHHHhhccCChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEEEEe
Q 013242 81 TGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGL 160 (447)
Q Consensus 81 ~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~lG~ 160 (447)
..... .++. .+..|+++.+........ ....++..++.+.+.+++.. .++|.
T Consensus 87 ---~~~~~---~~~~--~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~-------------~~~~~ 138 (280)
T 3skx_A 87 ---GVEGI---VNGR--RYMVVSPGYIRELGIKTD-------ESVEKLKQQGKTVVFILKNG-------------EVSGV 138 (280)
T ss_dssp ---EEEEE---ETTE--EEEEECHHHHHHTTCCCC-------TTHHHHHTTTCEEEEEEETT-------------EEEEE
T ss_pred ---EEEEE---ECCE--EEEEecHHHHHHcCCCch-------HHHHHHHhCCCeEEEEEECC-------------EEEEE
Confidence 11111 1232 334577777766443221 23445667788888877765 89999
Q ss_pred ccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchh
Q 013242 161 IPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240 (447)
Q Consensus 161 i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 240 (447)
+.+.++++|++.++|+.|++.|+++.++||++...+..+.+.+|+. ..|.
T Consensus 139 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~------------------------------~~f~ 188 (280)
T 3skx_A 139 IALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLD------------------------------DYFA 188 (280)
T ss_dssp EEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------EEEC
T ss_pred EEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCh------------------------------hHhH
Confidence 9999999999999999999999999999999999999999999985 3577
Q ss_pred ccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHH
Q 013242 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRM 320 (447)
Q Consensus 241 ~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~i 320 (447)
.+.|.+|...++.+.+.. .++||||+.||++|++.||+||+|+++++.++..||+++..++++++..++..+|+++.++
T Consensus 189 ~~~~~~k~~~~k~~~~~~-~~~~vGD~~nDi~~~~~Ag~~va~~~~~~~~~~~a~~~~~~~~~~~l~~~l~~~~~~~~~~ 267 (280)
T 3skx_A 189 EVLPHEKAEKVKEVQQKY-VTAMVGDGVNDAPALAQADVGIAIGAGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKF 267 (280)
T ss_dssp SCCGGGHHHHHHHHHTTS-CEEEEECTTTTHHHHHHSSEEEECSCCSSSCCCSSSEECSSCCTHHHHHHHHHHHTCCC--
T ss_pred hcCHHHHHHHHHHHHhcC-CEEEEeCCchhHHHHHhCCceEEecCCcHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHH
Confidence 888999999999998776 6799999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 013242 321 RNYMVRGI 328 (447)
Q Consensus 321 ~~~~~~~~ 328 (447)
++|+.|++
T Consensus 268 ~~n~~~~~ 275 (280)
T 3skx_A 268 HGLSAWSH 275 (280)
T ss_dssp --------
T ss_pred HHHHHHHH
Confidence 99999986
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.95 E-value=6.1e-28 Score=234.81 Aligned_cols=256 Identities=28% Similarity=0.412 Sum_probs=194.6
Q ss_pred CcEEEecchhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCchhhhccceEEEEEecCC
Q 013242 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDP 80 (447)
Q Consensus 1 v~~i~~DKTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~~~~~pF~~ 80 (447)
++++|||||||||.+.+.+.+++. . .+ +.++++.+++..+..++| |++.|+..++...+......+....++-.
T Consensus 32 i~~viFD~dGTL~ds~~~~~~~~~--~-~~-~~~~~l~~~~~~e~~s~h-p~~~a~~~~~~~~g~~~~~~~~~~~~~G~- 105 (287)
T 3a1c_A 32 VTAVIFDKTGTLTKGKPEVTDLVP--L-NG-DERELLRLAAIAERRSEH-PIAEAIVKKALEHGIELGEPEKVEVIAGE- 105 (287)
T ss_dssp CCEEEEECCCCCBCSCCEEEEEEE--S-SS-CHHHHHHHHHHHTTTCCS-HHHHHHHHHHHHTTCCCCCCSCEEEETTT-
T ss_pred CCEEEEeCCCCCcCCCEEEEEEEe--C-CC-CHHHHHHHHHHHhhcCCC-HHHHHHHHHHHhcCCCccccccceeecCC-
Confidence 579999999999999999987543 2 34 788899999888877654 99999988764221100011111111100
Q ss_pred CCceEEEEEEecCCeEEEEEcCcHHHHHhhccCChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEEEEe
Q 013242 81 TGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGL 160 (447)
Q Consensus 81 ~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~lG~ 160 (447)
. +.. ..+.+|+++.+.+... ..++.+....+.+..+|.+++++++.. .+++.
T Consensus 106 -----~--~~~-----~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~i~~~~d~-------------~~~~~ 157 (287)
T 3a1c_A 106 -----G--VVA-----DGILVGNKRLMEDFGV---AVSNEVELALEKLEREAKTAVIVARNG-------------RVEGI 157 (287)
T ss_dssp -----E--EEE-----TTEEEECHHHHHHTTC---CCCHHHHHHHHHHHHTTCEEEEEEETT-------------EEEEE
T ss_pred -----C--eEE-----EEEEECCHHHHHhcCC---CccHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEE
Confidence 0 000 2245677766544221 111235566777888999999999876 89999
Q ss_pred ccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchh
Q 013242 161 IPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 240 (447)
Q Consensus 161 i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 240 (447)
+...++++|++.++|+.|++.|+++.++||++...+..+.+.+|+. ..|.
T Consensus 158 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~------------------------------~~f~ 207 (287)
T 3a1c_A 158 IAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------LVIA 207 (287)
T ss_dssp EEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------EEEC
T ss_pred EEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCc------------------------------eeee
Confidence 9999999999999999999999999999999999999999999985 3466
Q ss_pred ccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHH
Q 013242 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRM 320 (447)
Q Consensus 241 ~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~i 320 (447)
.+.|..|...++.++.. ..|+||||+.||++|.+.||++|+++++.+..+..||+++.++++..+..++..+|+++++|
T Consensus 208 ~i~~~~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v~~~~~~~~~~~~ad~v~~~~~~~~l~~~l~~~~~~~~~i 286 (287)
T 3a1c_A 208 EVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKI 286 (287)
T ss_dssp SCCTTCHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEEEECCCSCCSSCCSSEEESSSCTHHHHHHHHTTC------
T ss_pred ecChHHHHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCeeEEeCCCCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHhh
Confidence 77799999999999988 89999999999999999999999999876666778999998889999999999999999988
Q ss_pred H
Q 013242 321 R 321 (447)
Q Consensus 321 ~ 321 (447)
+
T Consensus 287 ~ 287 (287)
T 3a1c_A 287 K 287 (287)
T ss_dssp -
T ss_pred C
Confidence 5
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.85 E-value=3.1e-21 Score=172.86 Aligned_cols=138 Identities=23% Similarity=0.343 Sum_probs=118.5
Q ss_pred CCCChHHHHHHHHHhc--CCCCCChHHHHHHHhhCCc--hhhhccceEEEEEecCCCCceEEEEEEecCCeEEEEEcCcH
Q 013242 29 GGVDADTVVLMAARAS--QVENLDVIDAAIVGMLADP--KEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSP 104 (447)
Q Consensus 29 ~~~~~~~~l~~a~~~~--~~~~~~pi~~ai~~~~~~~--~~~~~~~~~~~~~pF~~~~kr~~v~~~~~~g~~~~~~KGa~ 104 (447)
.|.+.++++.+|++++ +....||+|.|++.++... ...+..|+.++.+||+|.+|||++++++.+|+.++++||||
T Consensus 11 ~G~~~~~vl~~a~L~s~~~~~~~n~~d~Ail~~~~~~~~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGAp 90 (170)
T 3gwi_A 11 SGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGAL 90 (170)
T ss_dssp TSCBCHHHHHHHHHHHHHCCSCCCHHHHHHHHTSCHHHHHHHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEECH
T ss_pred CCCCHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhcChhhhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCCc
Confidence 5788899999999998 5667799999999987532 22367899999999999999999999877788899999999
Q ss_pred HHHHhhcc----------CChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCC---cCCCCCCcEEEEeccCCCC
Q 013242 105 EQILNLLH----------NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGS---KESSGSPWQFIGLIPLFDP 166 (447)
Q Consensus 105 e~i~~~~~----------~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~---~~~~e~~~~~lG~i~l~d~ 166 (447)
|.|+++|+ .+++..+.+.+.+++|+++|+|||+|||+.++..+ ..+.|++|+|+|+++|.|.
T Consensus 91 E~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~~~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 91 QEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDH 165 (170)
T ss_dssp HHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSCCCGGGSCSEEEEEEEEEEC-
T ss_pred HHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccccCccccCCcEEEehhccccc
Confidence 99999997 35566788999999999999999999999987653 3356999999999999875
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.75 E-value=4.1e-19 Score=173.20 Aligned_cols=145 Identities=12% Similarity=0.026 Sum_probs=114.2
Q ss_pred CCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC--cccccCCcchhhhhcCChhHHHhhccchh
Q 013242 163 LFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP--SSALSGQDRDESIVALPVDELIEKADGFA 240 (447)
Q Consensus 163 l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 240 (447)
..+++||+++++++.|+++|++|+|+|||...++.++++++|+...... ...+...+.. ...... ....+.++
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~-~~~~~~----~~~i~~~~ 212 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENG-VLKGFK----GELIHVFN 212 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEECTTS-BEEEEC----SSCCCTTC
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEcccc-eeEecc----ccccchhh
Confidence 4579999999999999999999999999999999999999998643110 0001000000 000000 01124577
Q ss_pred ccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHh---hcCeeEEec-------CchHHHHhhcchhccCCChhHHHHHH
Q 013242 241 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALK---KADIGIAVA-------DATDAARSAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 241 ~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~---~A~vGIa~~-------~a~~~a~~aAD~vl~~~~~~~i~~~i 310 (447)
+..|.+|...+..+++.++.|+|+|||+||+||++ .||+||+|| ++.+.+++++|+||.++++..|+.+|
T Consensus 213 k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~i 292 (297)
T 4fe3_A 213 KHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSI 292 (297)
T ss_dssp HHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHHH
T ss_pred cccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHHH
Confidence 88899999999999999999999999999999955 999999999 78999999999999999999999888
Q ss_pred HH
Q 013242 311 LI 312 (447)
Q Consensus 311 ~~ 312 (447)
..
T Consensus 293 l~ 294 (297)
T 4fe3_A 293 LQ 294 (297)
T ss_dssp HH
T ss_pred HH
Confidence 74
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.57 E-value=1.9e-15 Score=137.49 Aligned_cols=123 Identities=22% Similarity=0.400 Sum_probs=106.4
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhhHHHHHHH
Q 013242 174 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKH 253 (447)
Q Consensus 174 ~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~K~~iV~~ 253 (447)
+|+.|++.|+++.++||++...+..+++.+|+. .+|..+ .+|.+.++.
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~------------------------------~~f~~~--~~K~~~~~~ 101 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIE------------------------------HLFQGR--EDKLVVLDK 101 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCS------------------------------EEECSC--SCHHHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCH------------------------------HHhcCc--CChHHHHHH
Confidence 899999999999999999999999999999995 123332 566777766
Q ss_pred Hhhc----CCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCC----hhHHHHHHHHHHHHHHHHHHHHH
Q 013242 254 LQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPG----LNVIITAVLISRAIFQRMRNYMV 325 (447)
Q Consensus 254 lq~~----g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~----~~~i~~~i~~~r~~~~~i~~~~~ 325 (447)
+.++ ...|+|+||+.||++|++.||++++++++.+.++..||+++.+++ +..+.+.+..+|..++++++++.
T Consensus 102 ~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~~~~~~~~~~ 181 (189)
T 3mn1_A 102 LLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAASFVREHAHGITRAQGGEGAAREFCELILSAQGNLEAAHSVYL 181 (189)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHTTS
T ss_pred HHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHccCcHHHHHHHHh
Confidence 6554 467999999999999999999999999999999999999998875 56677888889999999999998
Q ss_pred HHH
Q 013242 326 RGI 328 (447)
Q Consensus 326 ~~~ 328 (447)
|.+
T Consensus 182 ~~~ 184 (189)
T 3mn1_A 182 EGH 184 (189)
T ss_dssp TTC
T ss_pred ccc
Confidence 876
|
| >2o98_P H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, electrochemical proton G cell turgor, regulation, protein binding; HET: FSC; 2.70A {Nicotiana plumbaginifolia} | Back alignment and structure |
|---|
Probab=99.54 E-value=9.8e-16 Score=108.13 Aligned_cols=51 Identities=71% Similarity=1.076 Sum_probs=48.9
Q ss_pred cccccchhhHHHHhhhhHHhhhhhhcccchhhhhhhccCCChhhhhccccC
Q 013242 397 SYGELSWMAEEARRRAEIARLRELHTLKGHVESLIRLKGLDIDAIQQSYSV 447 (447)
Q Consensus 397 ~~~~~~~~~~~~~rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 447 (447)
++.++++++|+++||+|++||||+|+|+||+||++|+||+|++.++++|||
T Consensus 2 s~~~~s~~ae~a~~raeiarL~~~~sl~~~~es~~kl~g~dl~~~~~~~tv 52 (52)
T 2o98_P 2 NFNELNQLAEEAKRRAEIARQRELHTLKGHVESVVKLKGLDIETIQQSYDI 52 (52)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHTCCCCCCCCCCCC
T ss_pred chhHHHHHHHHhcCcceeeccccchhHHHHHHhhHhhhhhhHhhcccccCC
Confidence 467889999999999999999999999999999999999999999999997
|
| >3m50_P N.plumbaginifolia H+-translocating ATPase mRNA; all helical, protein-protein complex, protein binding; HET: EBT; 2.60A {Nicotiana plumbaginifolia} PDB: 3m51_P* 4dx0_P* | Back alignment and structure |
|---|
Probab=99.50 E-value=1.9e-15 Score=91.31 Aligned_cols=30 Identities=73% Similarity=1.211 Sum_probs=29.4
Q ss_pred hhhhcccchhhhhhhccCCChhhhhccccC
Q 013242 418 RELHTLKGHVESLIRLKGLDIDAIQQSYSV 447 (447)
Q Consensus 418 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 447 (447)
||+||||||+|||+||||+|+++||+||||
T Consensus 2 rElhTLkghvESv~KLKglDi~~i~~~yTV 31 (31)
T 3m50_P 2 RELHTLKGHVEAVVKLKGLDIETIQQSYDI 31 (31)
T ss_dssp HHHHCHHHHHHHHHHHTTCCSCCCCCCCCC
T ss_pred chhhHHHHHHHHHHHHhcCChhhhhhcccC
Confidence 799999999999999999999999999998
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.47 E-value=3.6e-14 Score=140.39 Aligned_cols=154 Identities=14% Similarity=0.143 Sum_probs=109.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccCh
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 244 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p 244 (447)
-++.|++.++++.|++.|+++.|+||+....+..+.+.+|+..-......+......... .....+..-.|
T Consensus 177 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~---------~~~~~~~kpk~ 247 (335)
T 3n28_A 177 LPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQV---------LGEVVSAQTKA 247 (335)
T ss_dssp CCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEE---------ESCCCCHHHHH
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCeeeeee---------cccccChhhhH
Confidence 378999999999999999999999999999999999999995210000000000000000 00001111223
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHH
Q 013242 245 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYM 324 (447)
Q Consensus 245 ~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~i~~~~ 324 (447)
+....+++.++.....|+|+|||.||++|++.||+|++| ++.+.+++.||+++..+++.+|..++.......+++++|+
T Consensus 248 ~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~-~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~r~~~~~ 326 (335)
T 3n28_A 248 DILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQKLSWKS 326 (335)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTTCCCCC-
T ss_pred HHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhhhhcccc
Confidence 333344444444456799999999999999999999999 9999999999999999999999999998888788899999
Q ss_pred HHHH
Q 013242 325 VRGI 328 (447)
Q Consensus 325 ~~~~ 328 (447)
.|++
T Consensus 327 ~~~~ 330 (335)
T 3n28_A 327 KEGH 330 (335)
T ss_dssp ----
T ss_pred cccc
Confidence 8876
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=1.2e-13 Score=124.26 Aligned_cols=130 Identities=20% Similarity=0.165 Sum_probs=105.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhh
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 246 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~ 246 (447)
+.+.+.++|+.|++.|++++++||++...+..+.+.+|+.. .|.. ...
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~------------------------------~~~~--~k~ 83 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL------------------------------FFLG--KLE 83 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE------------------------------EEES--CSC
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce------------------------------eecC--CCC
Confidence 34567899999999999999999999999999999999952 1211 134
Q ss_pred HHHHHHHHhhc-C---CEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHH----HHHHHHHHHHH
Q 013242 247 KYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVII----TAVLISRAIFQ 318 (447)
Q Consensus 247 K~~iV~~lq~~-g---~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~----~~i~~~r~~~~ 318 (447)
|...++.+.++ + ..|+||||+.||++|++.|+++++++++.+.++..||+|+.+++..++. +.+...|..|+
T Consensus 84 k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~~~ 163 (180)
T 1k1e_A 84 KETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSS 163 (180)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTH
T ss_pred cHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeCCccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcCchh
Confidence 56665554433 3 5799999999999999999999999999999999999999988776666 44445777788
Q ss_pred HHHHHHHHHH
Q 013242 319 RMRNYMVRGI 328 (447)
Q Consensus 319 ~i~~~~~~~~ 328 (447)
+++.++.|+.
T Consensus 164 ~~~~~~~~~~ 173 (180)
T 1k1e_A 164 VFDTAQGFLK 173 (180)
T ss_dssp HHHCHHHHHH
T ss_pred hhhhccchhh
Confidence 9988888876
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.43 E-value=2.9e-13 Score=126.64 Aligned_cols=149 Identities=19% Similarity=0.133 Sum_probs=106.5
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--Ccccc---cCCcc-h-hhh------------
Q 013242 164 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSAL---SGQDR-D-ESI------------ 224 (447)
Q Consensus 164 ~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~--~~~~~---~~~~~-~-~~~------------ 224 (447)
...+.+.+.++|++|++.|++++++||+....+..+++++|+....+ +...+ .+... . ..+
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~ 99 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 99 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHH
Confidence 45688999999999999999999999999999999999999864211 00111 11100 0 000
Q ss_pred -----------------------hcCChhHHHhh-------ccchhccCh--hhHHHHHHHHhhc----CCEEEEEcCCC
Q 013242 225 -----------------------VALPVDELIEK-------ADGFAGVFP--EHKYEIVKHLQAR----NHICGMIGNGV 268 (447)
Q Consensus 225 -----------------------~~~~~~~~~~~-------~~v~a~~~p--~~K~~iV~~lq~~----g~~v~~iGDg~ 268 (447)
......++.+. ...+.++.| .+|...++.+.+. ...|+++||+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~ 179 (227)
T 1l6r_A 100 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 179 (227)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred hcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcH
Confidence 00000001000 011223445 5799988888764 24699999999
Q ss_pred CchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHH
Q 013242 269 NDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 312 (447)
Q Consensus 269 ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~ 312 (447)
||++|++.|++||+|+|+.+.++..||+++.+++.++|.++|+.
T Consensus 180 nD~~m~~~ag~~va~~n~~~~~k~~a~~v~~~~~~~Gv~~~l~~ 223 (227)
T 1l6r_A 180 NDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFKH 223 (227)
T ss_dssp GGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred HhHHHHHHcCceEEecCchHHHHHhCCEEecCCCCcHHHHHHHH
Confidence 99999999999999999999999999999999999999988863
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.43 E-value=2.6e-13 Score=123.57 Aligned_cols=123 Identities=19% Similarity=0.251 Sum_probs=100.2
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhcc--ChhhHHHHH
Q 013242 174 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV--FPEHKYEIV 251 (447)
Q Consensus 174 ~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~--~p~~K~~iV 251 (447)
+|+.|++.|+++.++||+....+..+++.+|+.. +|..+ .|+-...++
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~------------------------------~~~~~kpk~~~~~~~~ 103 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH------------------------------YYKGQVDKRSAYQHLK 103 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE------------------------------EECSCSSCHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc------------------------------ceeCCCChHHHHHHHH
Confidence 4999999999999999999999999999999952 22222 334444555
Q ss_pred HHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhH----HHHHHHHHHHHHHHHHHHHHH
Q 013242 252 KHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV----IITAVLISRAIFQRMRNYMVR 326 (447)
Q Consensus 252 ~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~----i~~~i~~~r~~~~~i~~~~~~ 326 (447)
+.++-....|+||||+.||++|++.|+++++++++.+.++..||+++.+++..+ +.+.+...|..|+++.+++++
T Consensus 104 ~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~~~~~~~~~ 182 (191)
T 3n1u_A 104 KTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELAITGYLK 182 (191)
T ss_dssp HHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred HHhCCCHHHEEEECCCHHHHHHHHHCCCEEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHh
Confidence 656555667999999999999999999999999999999999999999888544 556666788888887777654
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=2.8e-13 Score=118.96 Aligned_cols=140 Identities=21% Similarity=0.280 Sum_probs=97.1
Q ss_pred chhhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCc-hhhhccce--EEEEEecCCCCce
Q 013242 8 KTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADP-KEARADIQ--EVHFLPFDPTGKR 84 (447)
Q Consensus 8 KTGTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~-~~~~~~~~--~~~~~pF~~~~kr 84 (447)
..||+|.|+++|..++. ..+.+.++++.+|++++..+.| |+++||+.++.+. +......+ ..++.||++..++
T Consensus 13 ~~~tit~gnr~vt~v~~---~~g~~e~elL~lAAs~E~~SeH-Pla~AIv~~A~~~~~l~~~~~~~~~~~~~~F~a~~G~ 88 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIP---AQGVDEKTLADAAQLASLADET-PEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRM 88 (156)
T ss_dssp --------CEEEEEEEE---CTTSCHHHHHHHHHHTTSSCCS-HHHHHHHHHHHHHTTCCCCCHHHHTCEEEEEETTTTE
T ss_pred CCCceecCCCeEEEEEe---cCCCCHHHHHHHHHHHhCcCCC-HHHHHHHHHHHHhcCCCcccccccccceeeccccCCC
Confidence 47999999999988542 3578999999999999987665 9999999876532 11111110 2346799998886
Q ss_pred EEEEEEecCCeEEEEEcCcHHHHHhhccC-ChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEEEEeccC
Q 013242 85 TALTYIDSEGKMHRVTKGSPEQILNLLHN-KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPL 163 (447)
Q Consensus 85 ~~v~~~~~~g~~~~~~KGa~e~i~~~~~~-~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~lG~i~l 163 (447)
..+.+ +| ..+.+|+++.|..++.. ..+.+..+.+.+++++++|.++++||... +++|+|++
T Consensus 89 ~Gv~v---~G--~~v~vGn~~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA~d~-------------~l~GvIal 150 (156)
T 1svj_A 89 SGINI---DN--RMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS-------------RVLGVIAL 150 (156)
T ss_dssp EEEEE---TT--EEEEEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEE
T ss_pred CeEEE---CC--EEEEEeCcHHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEEECC-------------EEEEEEEE
Confidence 66643 56 56789998766665531 11233457778889999999999999876 99999999
Q ss_pred CCCCCc
Q 013242 164 FDPPIH 169 (447)
Q Consensus 164 ~d~~r~ 169 (447)
.|++||
T Consensus 151 aD~iK~ 156 (156)
T 1svj_A 151 KDIVKG 156 (156)
T ss_dssp EECCCC
T ss_pred ecCCCC
Confidence 999996
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.38 E-value=5.2e-13 Score=122.09 Aligned_cols=114 Identities=20% Similarity=0.307 Sum_probs=90.2
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhhHHHHHH
Q 013242 173 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVK 252 (447)
Q Consensus 173 ~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~K~~iV~ 252 (447)
..|+.|++.|+++.|+||++...+..+++.+|+. .+|... ..|...++
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~------------------------------~~~~~~--k~k~~~~~ 106 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGIS------------------------------LIYQGQ--DDKVQAYY 106 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCC------------------------------EEECSC--SSHHHHHH
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCc------------------------------EEeeCC--CCcHHHHH
Confidence 4599999999999999999999999999999995 123332 44556555
Q ss_pred HHhh----cCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHH----HHHHHHHHHHHH
Q 013242 253 HLQA----RNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVI----ITAVLISRAIFQ 318 (447)
Q Consensus 253 ~lq~----~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i----~~~i~~~r~~~~ 318 (447)
.+.+ ....|+||||+.||++|++.|+++++|+|+.+.++..||+|+.+++..++ .+.+..+|..|+
T Consensus 107 ~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~na~~~~~~~ad~v~~~~~~~G~~~~~~~~il~~~~~~~ 180 (195)
T 3n07_A 107 DICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLLAQRANYVTHIKGGHGAVREVCDLILQARNELD 180 (195)
T ss_dssp HHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCHHHHHHCSEECSSCTTTTHHHHHHHHHHHHTTSSC
T ss_pred HHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEECChHHHHHHhCCEEEcCCCCCCHHHHHHHHHHHhcccHH
Confidence 5544 34579999999999999999999999999999999999999998876664 334444444333
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.34 E-value=1.1e-12 Score=117.12 Aligned_cols=111 Identities=23% Similarity=0.196 Sum_probs=88.0
Q ss_pred EEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHH--HhCCCCCCCCcccccCCcchhhhhcCChhHHH
Q 013242 156 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGR--RLGMGTNMYPSSALSGQDRDESIVALPVDELI 233 (447)
Q Consensus 156 ~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~--~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (447)
..++.+.+.|. .+|+.|++.|+++.|+||+ ..+..+++ .+|+.
T Consensus 32 ~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~--------------------------- 76 (168)
T 3ewi_A 32 KEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK--------------------------- 76 (168)
T ss_dssp CCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC---------------------------
T ss_pred CEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE---------------------------
Confidence 34555555555 3899999999999999999 67888888 55552
Q ss_pred hhccchhccChhhHHHHHHHHhhc----CCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHH
Q 013242 234 EKADGFAGVFPEHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVII 307 (447)
Q Consensus 234 ~~~~v~a~~~p~~K~~iV~~lq~~----g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~ 307 (447)
+|. .+++|...++.+.++ ...|+|+||+.||++|++.|+++++|+|+.+.+++.||+|+.+++-++++
T Consensus 77 ----~~~--g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~na~~~~k~~Ad~v~~~~~~~G~~ 148 (168)
T 3ewi_A 77 ----TEV--SVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADACSGAQKAVGYICKCSGGRGAI 148 (168)
T ss_dssp ----EEC--SCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECTTCCHHHHTTCSEECSSCTTTTHH
T ss_pred ----EEE--CCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeCChhHHHHHhCCEEeCCCCCccHH
Confidence 011 124677777766654 34699999999999999999999999999999999999999988877744
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.34 E-value=1.4e-12 Score=120.66 Aligned_cols=100 Identities=24% Similarity=0.320 Sum_probs=86.1
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhhHHHHHHH
Q 013242 174 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKH 253 (447)
Q Consensus 174 ~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~K~~iV~~ 253 (447)
+|+.|++.|+++.++||++...+..+++.+|+. .+|..+ ..|..+++.
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~------------------------------~~f~~~--k~K~~~l~~ 131 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGIT------------------------------HLYQGQ--SDKLVAYHE 131 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCC------------------------------EEECSC--SSHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc------------------------------hhhccc--CChHHHHHH
Confidence 899999999999999999999999999999995 223333 566777766
Q ss_pred Hhhc----CCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhH
Q 013242 254 LQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV 305 (447)
Q Consensus 254 lq~~----g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~ 305 (447)
+.++ ...|+|+||+.||++|++.|+++++++++.+.++..||+|+.+++-.+
T Consensus 132 ~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~~~~~~~~~Ad~v~~~~~~~G 187 (211)
T 3ij5_A 132 LLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKAHYVTRIKGGRG 187 (211)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTT
T ss_pred HHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeCCccHHHHhhCCEEEeCCCCCc
Confidence 6554 567999999999999999999999999999999999999999886555
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.33 E-value=2.6e-12 Score=115.26 Aligned_cols=105 Identities=27% Similarity=0.348 Sum_probs=87.9
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhhHHHHHHH
Q 013242 174 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKH 253 (447)
Q Consensus 174 ~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~K~~iV~~ 253 (447)
+|+.|++.|+++.++||+....+..+++.+|+. . |... ..|...++.
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~--~-----------------------------~~~~--~~k~~~l~~ 93 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP--V-----------------------------LHGI--DRKDLALKQ 93 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC--E-----------------------------EESC--SCHHHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe--e-----------------------------EeCC--CChHHHHHH
Confidence 899999999999999999999999999999984 1 1222 456666665
Q ss_pred Hhhc----CCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 013242 254 LQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 254 lq~~----g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
+.++ ...++|+||+.||++|++.|+++++++++.+.++..||+++.+++..++...+.
T Consensus 94 ~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~~~~~~~~~~ad~v~~~~~~~g~~~~l~ 155 (176)
T 3mmz_A 94 WCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTTVPGGDGAIREIA 155 (176)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHH
T ss_pred HHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEECCChhHHHHHhCCEEecCCCCCcHHHHHH
Confidence 5543 357999999999999999999999999999999999999999988776655443
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.31 E-value=3.6e-12 Score=122.05 Aligned_cols=67 Identities=24% Similarity=0.285 Sum_probs=60.1
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHH
Q 013242 246 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 312 (447)
Q Consensus 246 ~K~~iV~~lq~~----g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~ 312 (447)
.|...++.+.++ ...|++|||+.||++|++.|++||||+|+.+.++.+||+|+.+++.++|.++|+.
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 4dw8_A 197 DKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAADYITLTNDEDGVAEAIER 267 (279)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCcHHHHHhCCEEcCCCCCcHHHHHHHH
Confidence 688887777654 3459999999999999999999999999999999999999999999999998874
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.27 E-value=1.6e-11 Score=118.19 Aligned_cols=68 Identities=18% Similarity=0.166 Sum_probs=60.7
Q ss_pred hhHHHHHHHHhhc----CCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHH
Q 013242 245 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 312 (447)
Q Consensus 245 ~~K~~iV~~lq~~----g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~ 312 (447)
..|...++.+.++ ...|++|||+.||++|++.|++||||+|+.+.++.+||+|+.+++.++|.++|+.
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~s~~edGv~~~i~~ 272 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKADWVTRSNDEQGVAYMMKE 272 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcHHHHHhcCEECCCCCccHHHHHHHH
Confidence 3588888777664 2359999999999999999999999999999999999999999999999998874
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.26 E-value=1e-11 Score=119.59 Aligned_cols=66 Identities=23% Similarity=0.259 Sum_probs=59.9
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 013242 246 HKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 246 ~K~~iV~~lq~~-g---~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
.|...++.+.+. | ..|++|||+.||++|++.|++||||+|+.+.++.+||+|+.+++.++|.++|+
T Consensus 211 ~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~s~~edGv~~~l~ 280 (283)
T 3dao_A 211 SKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQEVIAAAKHTCAPYWENGVLSVLK 280 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHHSSEEECCGGGTHHHHHHH
T ss_pred cHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCHHHHHhcCeECCCCCCChHHHHHH
Confidence 588888887664 2 35999999999999999999999999999999999999999999999998886
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.25 E-value=7.6e-12 Score=119.78 Aligned_cols=67 Identities=24% Similarity=0.260 Sum_probs=48.7
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHH
Q 013242 246 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 312 (447)
Q Consensus 246 ~K~~iV~~lq~~----g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~ 312 (447)
+|...++.+.+. ...|++|||+.||++|++.|++||||+|+.+.++.+||+|+.+++.++|.++|+.
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 3mpo_A 197 SKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDEVKEAAQAVTLTNAENGVAAAIRK 267 (279)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCHHHHHCSCBC------CHHHHHC-
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHHHHHhcceeccCCCccHHHHHHHH
Confidence 488888877664 2359999999999999999999999999999999999999999999999988863
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=9.9e-12 Score=109.53 Aligned_cols=106 Identities=26% Similarity=0.285 Sum_probs=85.9
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhhHHHHHHH
Q 013242 174 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKH 253 (447)
Q Consensus 174 ~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~K~~iV~~ 253 (447)
+|+.|++.|+++.++||++...+..+.+.+|+.. .|... ..|...++.
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~------------------------------~~~~~--kpk~~~~~~ 86 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY------------------------------LFQGV--VDKLSAAEE 86 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE------------------------------EECSC--SCHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE------------------------------eeccc--CChHHHHHH
Confidence 7999999999999999999999999999999851 22222 334444444
Q ss_pred Hhh----cCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhH-HHHHHH
Q 013242 254 LQA----RNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV-IITAVL 311 (447)
Q Consensus 254 lq~----~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~-i~~~i~ 311 (447)
+.+ ....|+|+||+.||++|++.|+++++++++.+.++..||+++.+++..+ +.++++
T Consensus 87 ~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~e~~~ 149 (164)
T 3e8m_A 87 LCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLSTIFLEKRGGEGVFREFVE 149 (164)
T ss_dssp HHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECCTTSCHHHHTTCSSCCCCCTTTTHHHHHHH
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcCChHHHHHHhCcEEeccCCCCcHHHHHHH
Confidence 433 3457999999999999999999999999999999999999999988666 444443
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.23 E-value=3.4e-11 Score=115.98 Aligned_cols=68 Identities=19% Similarity=0.201 Sum_probs=59.3
Q ss_pred hhHHHHHHHHhhc-C---CEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcch--hccCCChhHHHHHHHH
Q 013242 245 EHKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADI--VLTEPGLNVIITAVLI 312 (447)
Q Consensus 245 ~~K~~iV~~lq~~-g---~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~--vl~~~~~~~i~~~i~~ 312 (447)
..|...++.+.+. | ..|++|||+.||++|++.|++||||+||.+.+|++||+ |+.+++.++|.++|+.
T Consensus 208 ~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~vk~~A~~~~v~~sn~edGva~~i~~ 281 (285)
T 3pgv_A 208 VSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKDLHPELEVIGSNADDAVPRYLRK 281 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCTTSEECCCGGGTHHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCHHHHHhCCCCEecccCCcchHHHHHHH
Confidence 3588888887664 3 35999999999999999999999999999999999995 6778999999988863
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.21 E-value=1.9e-11 Score=124.51 Aligned_cols=140 Identities=19% Similarity=0.231 Sum_probs=107.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccch-hccCh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF-AGVFP 244 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-a~~~p 244 (447)
++.|++.+.++.|++.|+++.++||.....+..+.+.+|+.........+.+.... . .+. .-..+
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg~~t----g----------~~~~~v~~~ 321 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTLT----G----------RVVGPIIDR 321 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETTEEE----E----------EECSSCCCH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCCEEE----e----------eEccCCCCC
Confidence 78999999999999999999999999999999999999995211000000000000 0 000 11225
Q ss_pred hhHHHHHHHHhhc----CCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHH
Q 013242 245 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRM 320 (447)
Q Consensus 245 ~~K~~iV~~lq~~----g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~i 320 (447)
+.|.++++.+.++ ...|+|+||+.||++|++.||+|+++ ++.+.++..||+++..+++.++..++..+|.-+...
T Consensus 322 kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~-~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~~~~~ 400 (415)
T 3p96_A 322 AGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF-NAKPALREVADASLSHPYLDTVLFLLGVTRGEIEAA 400 (415)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHHHHHH
T ss_pred cchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE-CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHHHHHh
Confidence 6677777666543 35699999999999999999999999 888999999999999999999999998887766654
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.20 E-value=1.5e-11 Score=112.44 Aligned_cols=134 Identities=19% Similarity=0.213 Sum_probs=96.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchh-ccC
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA-GVF 243 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a-~~~ 243 (447)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+..-. .. .+...+ ..... .+.. ...
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f-~~-~~~~~~--~~~~~----------~~~~~~~~ 139 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAF-SN-TLIVEN--DALNG----------LVTGHMMF 139 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEE-EE-EEEEET--TEEEE----------EEEESCCS
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhc-cc-eeEEeC--CEEEe----------eeccCCCC
Confidence 458899999999999999999999999999999999999985210 00 000000 00000 0000 112
Q ss_pred hhhHHHHHHHHhh----cCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHH
Q 013242 244 PEHKYEIVKHLQA----RNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLIS 313 (447)
Q Consensus 244 p~~K~~iV~~lq~----~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~ 313 (447)
...|..+++.+.+ ....|++|||+.||++|++.||++++| ++.+..+..||+|+.++++..+..++.+-
T Consensus 140 ~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~-~~~~~l~~~ad~v~~~~dl~~~~~~~~~~ 212 (217)
T 3m1y_A 140 SHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHCINEPDLALIKPLIEGH 212 (217)
T ss_dssp TTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE-SCCHHHHTTCSEEECSSBGGGGTTC----
T ss_pred CCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE-CccHHHHHhcceeecccCHHHHHHHhccc
Confidence 3456666555543 345699999999999999999999999 88899999999999999999988877653
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.19 E-value=6.9e-11 Score=111.89 Aligned_cols=67 Identities=21% Similarity=0.261 Sum_probs=58.7
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHH
Q 013242 246 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 312 (447)
Q Consensus 246 ~K~~iV~~lq~~----g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~ 312 (447)
+|...++.+.+. ...|+++||+.||++|++.|++||||+|+.+.++..||+|+.+++.++|.++|+.
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~~~~~dGva~~i~~ 253 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEEVKRVADFVTKPVDKEGIWYGLKQ 253 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEETTCCHHHHHTCSEEECCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeCCCcHHHHHhCCEEeCCCCcchHHHHHHH
Confidence 477767766553 3469999999999999999999999999999999999999999999999998863
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.13 E-value=3.6e-11 Score=114.31 Aligned_cols=68 Identities=26% Similarity=0.276 Sum_probs=60.4
Q ss_pred hhHHHHHHHHhhc----CCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHH
Q 013242 245 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 312 (447)
Q Consensus 245 ~~K~~iV~~lq~~----g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~ 312 (447)
..|...++.+.++ ...|+++||+.||++|++.|++||||+|+.+.++++||+|+.+++.++|.++|+.
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~ 264 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVTDTVDNSGLYKALKH 264 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTCSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHHHHHhcCEeeCCCCcCHHHHHHHH
Confidence 3688888777664 2359999999999999999999999999999999999999999999999998864
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.13 E-value=6.3e-11 Score=115.26 Aligned_cols=68 Identities=25% Similarity=0.231 Sum_probs=60.8
Q ss_pred hhHHHHHHHHhhc-C---CEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHH
Q 013242 245 EHKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 312 (447)
Q Consensus 245 ~~K~~iV~~lq~~-g---~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~ 312 (447)
..|...++.+.++ | ..|++|||+.||++|++.|++||||+|+.+.++.+||+|+.+++.++|.++|+.
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~ 298 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAANYQAKSNDESGVLDVIDN 298 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcCHHHHHhccEEcCCCCcchHHHHHHH
Confidence 4688888887664 2 359999999999999999999999999999999999999999999999998873
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.12 E-value=5.1e-11 Score=113.36 Aligned_cols=67 Identities=24% Similarity=0.272 Sum_probs=59.6
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHH
Q 013242 246 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 312 (447)
Q Consensus 246 ~K~~iV~~lq~~----g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~ 312 (447)
.|...++.+.+. ...|++|||+.||++|++.|++||||+|+.+.++.+||+|+.+++.++|.++|+.
T Consensus 200 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~edGv~~~l~~ 270 (274)
T 3fzq_A 200 HKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQQLKDIATSICEDIFDNGIYKELKR 270 (274)
T ss_dssp SHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCccHHHHHhhhheeCCCchhHHHHHHHH
Confidence 488777766553 4569999999999999999999999999999999999999999999999998864
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=99.11 E-value=5.6e-11 Score=117.35 Aligned_cols=144 Identities=12% Similarity=0.160 Sum_probs=98.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCc---c-----------hhhhhcCChhH
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQD---R-----------DESIVALPVDE 231 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~---~-----------~~~~~~~~~~~ 231 (447)
++++++.++|+.|++ |+.+.++||+....+..+.+.+++..... ...+.... . ...+......+
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~ 180 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGELH-GTEVDFDSIAVPEGLREELLSIIDVIASLSGEEL 180 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSEEE-EEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhhhc-ccccchhhhccccccceeEEecCHHHHhhhhHHH
Confidence 468999999999999 99999999999777777778787732110 00000000 0 00000000000
Q ss_pred H--Hhh----c--cchhc--cC--hhhHHHHHHHHhhcC--CEEEEEcCCCCchhHHhhc----CeeEEecCchHHHHhh
Q 013242 232 L--IEK----A--DGFAG--VF--PEHKYEIVKHLQARN--HICGMIGNGVNDAPALKKA----DIGIAVADATDAARSA 293 (447)
Q Consensus 232 ~--~~~----~--~v~a~--~~--p~~K~~iV~~lq~~g--~~v~~iGDg~ND~~al~~A----~vGIa~~~a~~~a~~a 293 (447)
+ +.. . ..+.+ .. +.+|...++.+.... +.|+++|||.||++|++.| |+|||| |+.+.++..
T Consensus 181 l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na~~~lk~~ 259 (332)
T 1y8a_A 181 FRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NGNEYALKH 259 (332)
T ss_dssp HHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SCCHHHHTT
T ss_pred HHHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cCCHHHHhh
Confidence 0 000 0 11221 22 467988888665542 5599999999999999999 999999 999999999
Q ss_pred cchhccCCChhHHHHHHHH
Q 013242 294 ADIVLTEPGLNVIITAVLI 312 (447)
Q Consensus 294 AD~vl~~~~~~~i~~~i~~ 312 (447)
||+|+.+++.++|..+|+.
T Consensus 260 Ad~v~~~~~~dGV~~~l~~ 278 (332)
T 1y8a_A 260 ADVVIISPTAMSEAKVIEL 278 (332)
T ss_dssp CSEEEECSSTHHHHHHHHH
T ss_pred CcEEecCCCCCHHHHHHHH
Confidence 9999999999998877653
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=8.3e-11 Score=106.50 Aligned_cols=128 Identities=22% Similarity=0.312 Sum_probs=90.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhc-cCh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG-VFP 244 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~-~~p 244 (447)
++.|++.++|+.|++.|+++.++||+....+..+.+.+|+... .......... ... ...... +.+
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~----------~~~~~~~~~~ 141 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYA-FANRLIVKDG---KLT----------GDVEGEVLKE 141 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEE-EEEEEEEETT---EEE----------EEEECSSCST
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeE-EEeeeEEECC---EEc----------CCcccCccCC
Confidence 4678999999999999999999999999888888899988421 1000000000 000 000001 224
Q ss_pred hhHHHHHHHHhhc----CCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHH
Q 013242 245 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIIT 308 (447)
Q Consensus 245 ~~K~~iV~~lq~~----g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~ 308 (447)
..|...+..+.++ ...|+++||+.||++|++.||++++|+ +.+..+..||+++.++++..+..
T Consensus 142 ~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~-~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 142 NAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC-AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp THHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES-CCHHHHTTCSEEECSSCGGGGGG
T ss_pred ccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC-CCHHHHhhcceeecchhHHHHHH
Confidence 5676666555443 345999999999999999999999997 66777889999998777877654
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.09 E-value=2.1e-10 Score=107.11 Aligned_cols=148 Identities=22% Similarity=0.184 Sum_probs=102.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC--ccc-cc-CCc-----c---h---h----hhh
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP--SSA-LS-GQD-----R---D---E----SIV 225 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~--~~~-~~-~~~-----~---~---~----~~~ 225 (447)
..+.+.+.++|+++++.|++++++||+....+..+.+.+|++...+. ... .. +.. . . + ...
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~ 98 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFP 98 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCC
Confidence 34778999999999999999999999999999999999998642110 000 00 000 0 0 0 000
Q ss_pred cC--------------------Ch---hHHHhhc----cc-----hhccCh--hhHHHHHHHHhhc----CCEEEEEcCC
Q 013242 226 AL--------------------PV---DELIEKA----DG-----FAGVFP--EHKYEIVKHLQAR----NHICGMIGNG 267 (447)
Q Consensus 226 ~~--------------------~~---~~~~~~~----~v-----~a~~~p--~~K~~iV~~lq~~----g~~v~~iGDg 267 (447)
.. +. .++.+.. .+ +.++.| ..|...++.+.++ ...|+++||+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~ 178 (231)
T 1wr8_A 99 NARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG 178 (231)
T ss_dssp TCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECS
T ss_pred CceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCC
Confidence 00 00 1111111 11 122333 3588887776553 3469999999
Q ss_pred CCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHH
Q 013242 268 VNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 312 (447)
Q Consensus 268 ~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~ 312 (447)
.||++|++.|+++++|+++.+..+..||+++.+++.++|.++|+.
T Consensus 179 ~nD~~~~~~ag~~v~~~~~~~~~~~~a~~v~~~~~e~Gv~~~l~~ 223 (231)
T 1wr8_A 179 ENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIYH 223 (231)
T ss_dssp GGGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEecCCCHHHHhhCCEEecCCCcchHHHHHHH
Confidence 999999999999999999999899999999999989999888864
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.08 E-value=3e-10 Score=99.75 Aligned_cols=111 Identities=21% Similarity=0.261 Sum_probs=88.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccC--h
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF--P 244 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~--p 244 (447)
+.+++.++|+.|++.|++++++||+....+..+.+.+|+.. .|.... |
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~------------------------------~~~~~kp~~ 86 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE------------------------------IYTGSYKKL 86 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE------------------------------EEECC--CH
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh------------------------------hccCCCCCH
Confidence 35678899999999999999999999999999999999851 111111 2
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHH
Q 013242 245 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVII 307 (447)
Q Consensus 245 ~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~ 307 (447)
+--..+++.++-....++|+||+.||++|.+.||+++++.++.+..+..||+++.+.+..++.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~~~~~~~~~~a~~v~~~~~~~g~~ 149 (162)
T 2p9j_A 87 EIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVAVYITQRNGGEGAL 149 (162)
T ss_dssp HHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECSSCSSSSHH
T ss_pred HHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEecCccHHHHhhCCEEecCCCCCcHH
Confidence 222234444444455799999999999999999999999888888888999999998887777
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.06 E-value=1.9e-10 Score=112.94 Aligned_cols=131 Identities=15% Similarity=0.160 Sum_probs=95.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccch-hccCh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF-AGVFP 244 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-a~~~p 244 (447)
++.|++.++++.|++.|+++.++||.....+..+.+.+|+..-........+..... .+. ....+
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg~~tg--------------~i~~~~~~~ 244 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTD--------------NITLPIMNA 244 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETTEEEE--------------EECSSCCCH
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCCeeee--------------eEecccCCC
Confidence 588999999999999999999999999999999999999952110000000000000 000 01134
Q ss_pred hhHHHHHHHHhh----cCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 013242 245 EHKYEIVKHLQA----RNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 245 ~~K~~iV~~lq~----~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
+.|.++++.+.+ ....++||||+.||++|++.||+|+++ ++.+..+..||.++..+++..+..++.
T Consensus 245 kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~-~~~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 245 ANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred CCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 556666555433 345699999999999999999999999 788888899999999899998876653
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=3.2e-10 Score=102.53 Aligned_cols=107 Identities=24% Similarity=0.313 Sum_probs=85.1
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhhHHHHHH
Q 013242 173 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVK 252 (447)
Q Consensus 173 ~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~K~~iV~ 252 (447)
.+|+.|++.|++++++||+....+..+.+.+|+.. +|... ..|..+++
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~------------------------------~~~~~--kpk~~~~~ 107 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITH------------------------------LYQGQ--SNKLIAFS 107 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE------------------------------EECSC--SCSHHHHH
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce------------------------------eecCC--CCCHHHHH
Confidence 38999999999999999999999999999999851 12222 23444444
Q ss_pred HHhhc----CCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHH-HHHH
Q 013242 253 HLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVII-TAVL 311 (447)
Q Consensus 253 ~lq~~----g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~-~~i~ 311 (447)
.+.++ ...|+||||+.||++|++.||++++++++.+.++..||+++.+++..+++ +++.
T Consensus 108 ~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~l~ 171 (188)
T 2r8e_A 108 DLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCD 171 (188)
T ss_dssp HHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred HHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEecCcCHHHHhcCCEEEeCCCCCcHHHHHHH
Confidence 44332 35799999999999999999999999988888888999999988777666 5554
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.01 E-value=3.6e-10 Score=108.82 Aligned_cols=67 Identities=24% Similarity=0.211 Sum_probs=59.4
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHH
Q 013242 246 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 312 (447)
Q Consensus 246 ~K~~iV~~lq~~----g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~ 312 (447)
.|...++.+.+. ...|+++||+.||++|++.|++||+|+|+.+.++..||+++.+++.++|.++|+.
T Consensus 198 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~a~~v~~~~~~dGV~~~l~~ 268 (282)
T 1rkq_A 198 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIEK 268 (282)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCCcHHHHhhCCEEecCCCcchHHHHHHH
Confidence 688888877654 3469999999999999999999999999999999999999999999999988863
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=99.00 E-value=1.3e-10 Score=104.35 Aligned_cols=119 Identities=20% Similarity=0.267 Sum_probs=89.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+.++.|++.|+++.++|+.....+..+ +.+|+..- ........... . -....|.
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~----------------~-~~~~~~~ 139 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-ANRAIFEDGKF----------------Q-GIRLRFR 139 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EEEEEEETTEE----------------E-EEECCSS
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-eeeEEeeCCce----------------E-CCcCCcc
Confidence 7899999999999999999999999998888878 88887311 00000000000 0 0234567
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
.|...++.+ ....|++|||+.||++|++.||++|+|+++.+ .||+++. ++..+..++.
T Consensus 140 ~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~~~~~~----~ad~v~~--~~~el~~~l~ 197 (201)
T 4ap9_A 140 DKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAVGREIP----GADLLVK--DLKELVDFIK 197 (201)
T ss_dssp CHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEESSCCT----TCSEEES--SHHHHHHHHH
T ss_pred CHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEECCCCc----cccEEEc--cHHHHHHHHH
Confidence 799988888 56789999999999999999999999998776 7899985 4777766654
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.92 E-value=2.7e-10 Score=107.06 Aligned_cols=140 Identities=11% Similarity=0.083 Sum_probs=93.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccc--cCCc-------chhh-------------
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL--SGQD-------RDES------------- 223 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~--~~~~-------~~~~------------- 223 (447)
.+.+.+.++|++|++.| +++++||+....+..+.+.+ +.--..+...+ .+.. ....
T Consensus 23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l-~~~I~~nGa~i~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~ 100 (239)
T 1u02_A 23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLD-INMICYHGACSKINGQIVYNNGSDRFLGVFDRIYEDTRSWV 100 (239)
T ss_dssp CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSS-CEEEEGGGTEEEETTEEEECTTGGGGHHHHHHHHHHHTTHH
T ss_pred CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccc-hheEEECCEEEeeCCeeeecccccccchhhHHHHHHHHHHH
Confidence 57789999999999999 99999999999988887665 21000000000 0000 0000
Q ss_pred ------------------hhcC-Ch-hH----H---Hhh---cc-----chhccChh--hHHHHHHHHhhcCCEEEEEcC
Q 013242 224 ------------------IVAL-PV-DE----L---IEK---AD-----GFAGVFPE--HKYEIVKHLQARNHICGMIGN 266 (447)
Q Consensus 224 ------------------~~~~-~~-~~----~---~~~---~~-----v~a~~~p~--~K~~iV~~lq~~g~~v~~iGD 266 (447)
.... +. .+ + +.. .. .+.++.|. +|...++.|.+... |+++||
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lei~~~~~~Kg~al~~l~~~~g-via~GD 179 (239)
T 1u02_A 101 SDFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARIFGVETYYGKMIIELRVPGVNKGSAIRSVRGERP-AIIAGD 179 (239)
T ss_dssp HHSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHHHHHTCEEEECSSEEEEECTTCCHHHHHHHHHTTSC-EEEEES
T ss_pred hhCCCcEEEecCCEEEEEcCCCChhHHHHHHHHHHHHhccCCcEEEeCCcEEEEEcCCCCHHHHHHHHHhhCC-eEEEeC
Confidence 0000 00 00 0 111 01 12233443 69999999988744 999999
Q ss_pred CCCchhHHhhc--CeeEEecCchHHHHhhcchhccC-CChhHHHHHHHH
Q 013242 267 GVNDAPALKKA--DIGIAVADATDAARSAADIVLTE-PGLNVIITAVLI 312 (447)
Q Consensus 267 g~ND~~al~~A--~vGIa~~~a~~~a~~aAD~vl~~-~~~~~i~~~i~~ 312 (447)
+.||.+||+.| ++||||+|+ +..||+++.+ ++.++|.++|+.
T Consensus 180 ~~ND~~Ml~~a~~g~~vam~Na----~~~A~~v~~~~~~~~gV~~~l~~ 224 (239)
T 1u02_A 180 DATDEAAFEANDDALTIKVGEG----ETHAKFHVADYIEMRKILKFIEM 224 (239)
T ss_dssp SHHHHHHHHTTTTSEEEEESSS----CCCCSEEESSHHHHHHHHHHHHH
T ss_pred CCccHHHHHHhhCCcEEEECCC----CCcceEEeCCCCCHHHHHHHHHH
Confidence 99999999999 999999998 5789999987 778898888864
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.91 E-value=2.5e-09 Score=104.11 Aligned_cols=67 Identities=28% Similarity=0.308 Sum_probs=59.3
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhcc-CCChhHHHHHHHH
Q 013242 246 HKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLT-EPGLNVIITAVLI 312 (447)
Q Consensus 246 ~K~~iV~~lq~~-g---~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~-~~~~~~i~~~i~~ 312 (447)
.|...++.+.+. | ..|+++||+.||++|++.|++||+|+|+.+.++..||+++. +++.++|.++|+.
T Consensus 224 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~~dGVa~~l~~ 295 (301)
T 2b30_A 224 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLKK 295 (301)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHH
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCcHHHHhhCCEEEccCCCCcHHHHHHHH
Confidence 688888887654 2 35999999999999999999999999999999999999999 9999999988863
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.91 E-value=9.7e-09 Score=93.10 Aligned_cols=129 Identities=15% Similarity=0.106 Sum_probs=94.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+..- +......+.+... .....-.|+
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~-f~~~~~~~~~~~~--------------~~~~~p~p~ 132 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTL-LCHKLEIDDSDRV--------------VGYQLRQKD 132 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCE-EEEEEEECTTSCE--------------EEEECCSSS
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcce-ecceeEEcCCceE--------------EeeecCCCc
Confidence 5789999999999999 99999999999999999999998521 1001111100000 000114578
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
.|..+++.++.....|+||||+.||++|.+.||+++++. +.+..+..++.++.-+++..+..++.
T Consensus 133 ~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~ 197 (206)
T 1rku_A 133 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAVHTYEDLKREFL 197 (206)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCEECSHHHHHHHHH
T ss_pred hHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEEC-CcHHHHHHHhhhccccchHHHHHHHH
Confidence 899999999888889999999999999999999999984 44445554444432367888877664
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.91 E-value=3.3e-09 Score=96.16 Aligned_cols=129 Identities=9% Similarity=0.058 Sum_probs=91.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCC-CCCccccc-CCcchhhhhcCChhHHHhhccchhccCh
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTN-MYPSSALS-GQDRDESIVALPVDELIEKADGFAGVFP 244 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~a~~~p 244 (447)
+.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... .+...... ..... . ........|
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~-~~~~~~~~~ 149 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSF------------K-ELDNSNGAC 149 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBE------------E-EEECTTSTT
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCce------------e-ccCCCCCCc
Confidence 779999999999999999999999999999999999999521 11110110 00000 0 001233456
Q ss_pred hhHHHHHHHH-hhcCCEEEEEcCCCCchhHHhh----cCeeEEecCchHHHHhhcchhccCCChhHHHHHH
Q 013242 245 EHKYEIVKHL-QARNHICGMIGNGVNDAPALKK----ADIGIAVADATDAARSAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 245 ~~K~~iV~~l-q~~g~~v~~iGDg~ND~~al~~----A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i 310 (447)
..|...+..+ +-....++|+||+.||++|++. +.++++++++.+..+..||+++. ++..+..++
T Consensus 150 ~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~~~~~~~~~~ad~v~~--~~~el~~~l 218 (219)
T 3kd3_A 150 DSKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEHIEREKVINLSKYVAR--NVAELASLI 218 (219)
T ss_dssp TCHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECSSCCCHHHHHHCSEEES--SHHHHHHHH
T ss_pred ccHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccCccccHHHHhhcceeeC--CHHHHHHhh
Confidence 6677766554 5567899999999999999975 34555556777888899999984 477766554
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=3.4e-09 Score=100.46 Aligned_cols=65 Identities=22% Similarity=0.276 Sum_probs=56.6
Q ss_pred hhHHHHHHHHhhc-C-----CEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHH
Q 013242 245 EHKYEIVKHLQAR-N-----HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 312 (447)
Q Consensus 245 ~~K~~iV~~lq~~-g-----~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~ 312 (447)
.+|...++.+.++ | ..|+++||+.||.+|++.|++|++|+|+.+ + ++++++.+++-+++.++|..
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~--~~~~~~~~~~~~gv~~~~~~ 245 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP-P--EGVLATPAPGPEGFRYAVER 245 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC-C--TTCEECSSCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh-c--CCcEEeCCCCchHHHHHHHH
Confidence 5788888887665 3 679999999999999999999999999988 4 78899999999999888864
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=1.7e-09 Score=98.10 Aligned_cols=127 Identities=13% Similarity=0.115 Sum_probs=92.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+..-.....++.. +. ....-.|+
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~-~~-----------------~~~kp~~~ 131 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGR-DE-----------------APPKPHPG 131 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECT-TT-----------------SCCTTSSH
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeC-CC-----------------CCCCCCHH
Confidence 3568999999999999999999999999999999999998421100111110 00 01111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCe-eEEecCchHHHHhhcchhccCCChhHHHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVADATDAARSAADIVLTEPGLNVIITAVLI 312 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~v-GIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~ 312 (447)
--..+++.+.-....|++|||+.||+.|.+.||+ +|+|+++.+..+..||+++ +++..+...+..
T Consensus 132 ~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~ad~v~--~~~~el~~~~~~ 197 (205)
T 3m9l_A 132 GLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWPELTDWHA--RDCAQLRDLLSA 197 (205)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECSSSSCSCGGGCSEEC--SSHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCCcccccCCEEe--CCHHHHHHHHHh
Confidence 2334555555455679999999999999999999 9999988777788899999 458888877765
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.87 E-value=1.4e-09 Score=103.87 Aligned_cols=68 Identities=22% Similarity=0.250 Sum_probs=59.7
Q ss_pred hhHHHHHHHHhhc-C---CEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHH
Q 013242 245 EHKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 312 (447)
Q Consensus 245 ~~K~~iV~~lq~~-g---~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~ 312 (447)
..|...++.+.+. | ..|+++||+.||++|++.|++||+|+|+.+.++..||+|+.+++.++|.++|+.
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~dGVa~~l~~ 261 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQA 261 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCccHHHHHhCCeeCcCCCCChHHHHHHH
Confidence 3688888777654 2 459999999999999999999999999999999999999999999999988863
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.84 E-value=6.8e-09 Score=98.96 Aligned_cols=66 Identities=20% Similarity=0.259 Sum_probs=58.4
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 013242 246 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 246 ~K~~iV~~lq~~----g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
.|...++.+.+. ...|+++||+.||++|++.|++|++|+|+.+.++..||+++.+++.++|.++|+
T Consensus 190 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCCHHHHhhCCEEEccCCcchHHHHHH
Confidence 688888777653 245999999999999999999999999999999999999999999999998875
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.83 E-value=5.4e-09 Score=96.54 Aligned_cols=127 Identities=21% Similarity=0.273 Sum_probs=91.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+... ....-.|+
T Consensus 104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 164 (237)
T 4ex6_A 104 LLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRL--TVIAGDDSV-----------------ERGKPHPD 164 (237)
T ss_dssp GBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTC--SEEECTTTS-----------------SSCTTSSH
T ss_pred ccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhhe--eeEEeCCCC-----------------CCCCCCHH
Confidence 36789999999999999999999999999999999999984211 111111000 01111233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCe---eEEecC-chHHHHh-hcchhccCCChhHHHHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADI---GIAVAD-ATDAARS-AADIVLTEPGLNVIITAVLIS 313 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~v---GIa~~~-a~~~a~~-aAD~vl~~~~~~~i~~~i~~~ 313 (447)
--..+++.++-....|++|||+.||+.|++.||+ +|++++ ..+..+. .||+++ +++..+..+|+.+
T Consensus 165 ~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~~~~el~~~l~~~ 235 (237)
T 4ex6_A 165 MALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVV--DSFPAAVTAVLDG 235 (237)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEE--SSHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEE--CCHHHHHHHHHcc
Confidence 3345556666556679999999999999999999 888884 4355554 799998 5588888887754
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=98.78 E-value=1e-08 Score=92.45 Aligned_cols=136 Identities=15% Similarity=0.213 Sum_probs=87.6
Q ss_pred hhcccCceEEEeeEeecccCCCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCc-hhh-hccceEEEEEecCCCCceEEE
Q 013242 10 GTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADP-KEA-RADIQEVHFLPFDPTGKRTAL 87 (447)
Q Consensus 10 GTLT~n~~~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~-~~~-~~~~~~~~~~pF~~~~kr~~v 87 (447)
||||+|++.|..+..-....+.+.++++.+++.++..+.| |++.||+.++.+. ... .......+.+| .+-+.-
T Consensus 1 GTLT~G~p~V~~v~~~~~~~~~~~~~lL~laaa~E~~SeH-PlA~AIv~~a~~~~~~~~~~~~~~f~~i~----G~Gv~~ 75 (185)
T 2kmv_A 1 SFTMHGTPVVNQVKVLTESNRISHHKILAIVGTAESNSEH-PLGTAITKYCKQELDTETLGTCIDFQVVP----GCGISC 75 (185)
T ss_dssp CCCCSCCCEEEEEEECSCTTTSCHHHHHHHHHHGGGSSSC-HHHHHHHHHHHHHHTCSCCCCCBCCEEET----TTEEEE
T ss_pred CCCcCCcEEEEEEEecCCcCCCCHHHHHHHHHHHHccCCC-HHHHHHHHHHHhhcCCCCCCCccceEEec----cceEEE
Confidence 8999999999885321111346888999999999998877 9999999986421 100 01112222222 111222
Q ss_pred EEEecCC-----------------------------------------------eEEEEEcCcHHHHHhhccCChhhHHH
Q 013242 88 TYIDSEG-----------------------------------------------KMHRVTKGSPEQILNLLHNKSKIGRK 120 (447)
Q Consensus 88 ~~~~~~g-----------------------------------------------~~~~~~KGa~e~i~~~~~~~~~~~~~ 120 (447)
.+.+.++ +...+..|++++|.+..- ..++.
T Consensus 76 ~V~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi---~i~~~ 152 (185)
T 2kmv_A 76 KVTNIEGLLHKNNWNIEDNNIKNASLVQIDASNEQSSTSSSMIIDAQISNALNAQQYKVLIGNREWMIRNGL---VINND 152 (185)
T ss_dssp EECCSGGGSSCSSCCCCSCCCCCCCCCCTTTTSCCCCCCCCCCCSTTTTTGGGSCCEEEEEECHHHHHHHTC---CCCHH
T ss_pred EECCccccccccccccccccccccccccccccccccccccccccccccccccCCCceEEEECCHHHHHHcCC---CCCHH
Confidence 2221000 115778999999876321 22234
Q ss_pred HHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEEEEeccCCCC
Q 013242 121 VNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDP 166 (447)
Q Consensus 121 ~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~d~ 166 (447)
+...+.++..+|..++.||.+. +++|++++.|+
T Consensus 153 ~~~~~~~~~~~G~T~V~vaidg-------------~l~g~iavaD~ 185 (185)
T 2kmv_A 153 VNDFMTEHERKGRTAVLVAVDD-------------ELCGLIAIADT 185 (185)
T ss_dssp HHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEEECC
T ss_pred HHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEEEcC
Confidence 5556677888999999999887 89999999985
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.77 E-value=8.7e-09 Score=98.74 Aligned_cols=67 Identities=19% Similarity=0.131 Sum_probs=34.6
Q ss_pred hHHHHHHHHhhc-----CCE--EEEEcCCCCchhHHhhcCeeEEecCch---HHHHhh--cc-hhccCCChhHHHHHHHH
Q 013242 246 HKYEIVKHLQAR-----NHI--CGMIGNGVNDAPALKKADIGIAVADAT---DAARSA--AD-IVLTEPGLNVIITAVLI 312 (447)
Q Consensus 246 ~K~~iV~~lq~~-----g~~--v~~iGDg~ND~~al~~A~vGIa~~~a~---~~a~~a--AD-~vl~~~~~~~i~~~i~~ 312 (447)
+|...++.+.+. ... ++++||+.||.+|++.|++||+|+|+. +.++.. || +|+.+++.++|.++|+.
T Consensus 189 ~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~l~~ 268 (275)
T 1xvi_A 189 GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVKGLNREGVHLHDEDPARVWRTQREGPEGWREGLDH 268 (275)
T ss_dssp CHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECCCCC-------------------------------
T ss_pred CHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEecCCCccchhhccccCCceeEccCCCchHHHHHHHH
Confidence 477766665543 235 999999999999999999999999987 566543 78 89989999999988863
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.75 E-value=3.7e-08 Score=90.90 Aligned_cols=107 Identities=17% Similarity=0.159 Sum_probs=75.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccch-hccCh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF-AGVFP 244 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-a~~~p 244 (447)
++.|++.+.|+.|++.|+++.++||.....+..+++.+|+.. .+......... .... ... ....+
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~---~~~g----------~~~~~~~~~ 157 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQH-LIATDPEYRDG---RYTG----------RIEGTPSFR 157 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCE-EEECEEEEETT---EEEE----------EEESSCSST
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE-EEEcceEEECC---EEee----------eecCCCCcc
Confidence 478999999999999999999999999999999999999852 11110000000 0000 000 11234
Q ss_pred hhHHHHHHHHhh-cC------CEEEEEcCCCCchhHHhhcCeeEEecCc
Q 013242 245 EHKYEIVKHLQA-RN------HICGMIGNGVNDAPALKKADIGIAVADA 286 (447)
Q Consensus 245 ~~K~~iV~~lq~-~g------~~v~~iGDg~ND~~al~~A~vGIa~~~a 286 (447)
..|...++.+.+ .| ..|+++||+.||++|++.||+++++...
T Consensus 158 ~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~~~ 206 (232)
T 3fvv_A 158 EGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPS 206 (232)
T ss_dssp HHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEESCC
T ss_pred hHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEECcC
Confidence 567766655433 23 6899999999999999999999999533
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.74 E-value=9.2e-09 Score=93.53 Aligned_cols=123 Identities=4% Similarity=-0.047 Sum_probs=84.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+.++.+++.|+++.++|+. ..+..+.+.+|+.... ..++.+... ....-.|+
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~~ 149 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYF--DAIADPAEV-----------------AASKPAPD 149 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGC--SEECCTTTS-----------------SSCTTSSH
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHc--ceEeccccC-----------------CCCCCChH
Confidence 36789999999999999999999998 4456677777774210 011111000 00111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i 310 (447)
--..+++.++-....|++|||+.||++|++.||++++|.++.+..+ .||+++.+.+.-++..++
T Consensus 150 ~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~-~a~~v~~~~~el~~~~~~ 213 (221)
T 2wf7_A 150 IFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLG-DDIVIVPDTSHYTLEFLK 213 (221)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHHHHC-SSSEEESSGGGCCHHHHH
T ss_pred HHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEECCHHHhc-cccchhcCHHhCCHHHHH
Confidence 3344555555555679999999999999999999999999888777 899999776555554444
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.73 E-value=5.2e-09 Score=99.17 Aligned_cols=66 Identities=26% Similarity=0.298 Sum_probs=57.1
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 013242 246 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 246 ~K~~iV~~lq~~----g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
.|...++.+.++ ...|+++||+.||++|++.|++|++|+|+.+..+..||+++.+++.+|+..+++
T Consensus 187 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~l~ 256 (261)
T 2rbk_A 187 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMK 256 (261)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccHHHHhhCCEEeccCchhhHHHHHH
Confidence 577777666543 346999999999999999999999999999999999999999888888988775
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.73 E-value=1.2e-08 Score=93.31 Aligned_cols=126 Identities=10% Similarity=0.124 Sum_probs=88.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+... ....-.|+
T Consensus 86 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 146 (226)
T 3mc1_A 86 KVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYF--DAIVGSSLD-----------------GKLSTKED 146 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEECTT-----------------SSSCSHHH
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhhe--eeeeccCCC-----------------CCCCCCHH
Confidence 57899999999999999999999999999999999999984210 001100000 00001122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCe---eEEecCchHHH--HhhcchhccCCChhHHHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADI---GIAVADATDAA--RSAADIVLTEPGLNVIITAVLI 312 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~v---GIa~~~a~~~a--~~aAD~vl~~~~~~~i~~~i~~ 312 (447)
--..+++.++-....|++|||+.||+.|++.||+ +|+++++.... +..||+++. ++..+..++..
T Consensus 147 ~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--s~~el~~~~~~ 216 (226)
T 3mc1_A 147 VIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVN--SVDELHKKILE 216 (226)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEES--SHHHHHHHHHT
T ss_pred HHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEEC--CHHHHHHHHHH
Confidence 2233444454445579999999999999999999 88887644333 578999984 58888877765
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.71 E-value=2.6e-08 Score=91.59 Aligned_cols=124 Identities=11% Similarity=0.062 Sum_probs=80.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhh
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 246 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~ 246 (447)
+.|++.+.++.|++.|+++.++|+... +..+.+.+|+.... ..++.+... ....-.|+-
T Consensus 93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f--~~i~~~~~~-----------------~~~Kp~~~~ 151 (233)
T 3nas_A 93 LLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDF--HAIVDPTTL-----------------AKGKPDPDI 151 (233)
T ss_dssp SCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTC--SEECCC--------------------------CCH
T ss_pred cCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhc--CEEeeHhhC-----------------CCCCCChHH
Confidence 678999999999999999999999754 77788888885321 111111000 001111222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHH
Q 013242 247 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 312 (447)
Q Consensus 247 K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~ 312 (447)
-..+++.++-....|+||||+.||+.|.+.||++++|.++.+..+ .||+++.+.+.-.+..+++.
T Consensus 152 ~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~~~~-~ad~v~~s~~el~~~~~~~~ 216 (233)
T 3nas_A 152 FLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQGQPML-GADLVVRQTSDLTLELLHEE 216 (233)
T ss_dssp HHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEECC--------CSEECSSGGGCCHHHHHHH
T ss_pred HHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEECCccccc-cCCEEeCChHhCCHHHHHHH
Confidence 245566666666779999999999999999999999998777666 89999977555454444443
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.70 E-value=9.1e-09 Score=97.10 Aligned_cols=55 Identities=20% Similarity=0.164 Sum_probs=47.3
Q ss_pred hHHHHHHHHhhc-----CCEEEEEcCCCCchhHHhhcCeeEEecCch-HHHHhhcchhccC
Q 013242 246 HKYEIVKHLQAR-----NHICGMIGNGVNDAPALKKADIGIAVADAT-DAARSAADIVLTE 300 (447)
Q Consensus 246 ~K~~iV~~lq~~-----g~~v~~iGDg~ND~~al~~A~vGIa~~~a~-~~a~~aAD~vl~~ 300 (447)
+|...++.+.+. ...|++|||+.||++||+.|++||||+|+. +..+..||+|+.+
T Consensus 179 sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 179 DKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp CHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHHH
T ss_pred ChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEecc
Confidence 588888777654 347999999999999999999999999988 7788889999865
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.70 E-value=1.3e-08 Score=97.89 Aligned_cols=132 Identities=15% Similarity=0.165 Sum_probs=91.8
Q ss_pred CCCcchHHHHHHHHhC-CCeEEEEcCC---------------------cHHHHHHHHHHhCCCCCCCCcccccCCcchhh
Q 013242 166 PPIHDSAETIRRALSL-GLGVKMITGD---------------------QLAIAKETGRRLGMGTNMYPSSALSGQDRDES 223 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~-Gi~v~miTGd---------------------~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~ 223 (447)
.+++++.+.++.+++. |+++.+.|.. ....+..+.+..|+...........+..
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~---- 197 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDP---- 197 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCC----
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCC----
Confidence 3568899999999988 9999998876 3445555666666531100000000000
Q ss_pred hhcCChhHHHhhccchhccCh--hhHHHHHHHHhhc----CCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchh
Q 013242 224 IVALPVDELIEKADGFAGVFP--EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 297 (447)
Q Consensus 224 ~~~~~~~~~~~~~~v~a~~~p--~~K~~iV~~lq~~----g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~v 297 (447)
....+..+.| ..|...++.+.++ ...|+++||+.||++|++.|++|++|+++.+..+..||++
T Consensus 198 -----------~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~~~~~~a~~v 266 (289)
T 3gyg_A 198 -----------EDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQEAKNLHNLI 266 (289)
T ss_dssp -----------TTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCHHHHHHCCCB
T ss_pred -----------CCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccHHHHHhCCEE
Confidence 0001233333 3567766666543 3469999999999999999999999999999999999999
Q ss_pred ccCCChhHHHHHHHH
Q 013242 298 LTEPGLNVIITAVLI 312 (447)
Q Consensus 298 l~~~~~~~i~~~i~~ 312 (447)
+.+++.+++.++|+.
T Consensus 267 ~~~~~~~gv~~~~~~ 281 (289)
T 3gyg_A 267 TDSEYSKGITNTLKK 281 (289)
T ss_dssp CSSCHHHHHHHHHHH
T ss_pred cCCCCcCHHHHHHHH
Confidence 999999999888863
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.67 E-value=1.8e-08 Score=92.72 Aligned_cols=126 Identities=19% Similarity=0.245 Sum_probs=86.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC-CCCCccc-------ccCCcchhhhhcCChhHHHhhcc
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT-NMYPSSA-------LSGQDRDESIVALPVDELIEKAD 237 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~-~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 237 (447)
++.|++.++|+.|++.|++++++|+.....+..+.+.+|+.. ..+.... +.+.+.
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~----------------- 148 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDE----------------- 148 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECT-----------------
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCC-----------------
Confidence 588999999999999999999999999999999999999852 1111000 000000
Q ss_pred chhccChhhHHHHHHHHhhc-C-CEEEEEcCCCCchhHHhhcCeeEEecCc--hHHHHhhcchhccCCChhHHHHHH
Q 013242 238 GFAGVFPEHKYEIVKHLQAR-N-HICGMIGNGVNDAPALKKADIGIAVADA--TDAARSAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 238 v~a~~~p~~K~~iV~~lq~~-g-~~v~~iGDg~ND~~al~~A~vGIa~~~a--~~~a~~aAD~vl~~~~~~~i~~~i 310 (447)
....+.+..|..+++.+.++ | ..++||||+.||++|.+.||++|+++.. .+.....+|+++. ++..+..++
T Consensus 149 ~~~~~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~--~~~el~~~l 223 (225)
T 1nnl_A 149 TQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT--DFVELLGEL 223 (225)
T ss_dssp TSGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES--CGGGGCC--
T ss_pred CCcccCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeec--CHHHHHHHH
Confidence 00111233566666655443 3 5799999999999999999999988742 3344556888884 466654443
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.66 E-value=3e-08 Score=90.12 Aligned_cols=122 Identities=16% Similarity=0.211 Sum_probs=85.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.+++.+.++.+++.|++++++|+........+.+.+|+.... ..++..... ....-.|+
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~-----------------~~~kp~~~ 154 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSF--DALASAEKL-----------------PYSKPHPQ 154 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEECTTS-----------------SCCTTSTH
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhC--cEEEecccc-----------------CCCCCChH
Confidence 35689999999999999999999999988888888888874210 111111000 00111133
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEe----cCchHHHHhhcchhccCCChhHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV----ADATDAARSAADIVLTEPGLNVIIT 308 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~----~~a~~~a~~aAD~vl~~~~~~~i~~ 308 (447)
--..+++.++-....|++|||+.||++|++.||+++++ +++.+..+..||+++.+ +..+..
T Consensus 155 ~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~--~~el~~ 219 (226)
T 1te2_A 155 VYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSS--LTELTA 219 (226)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSC--GGGCCH
T ss_pred HHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECC--HHHHhH
Confidence 33445555555556799999999999999999999999 56665667889999854 555443
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.66 E-value=4.2e-08 Score=92.40 Aligned_cols=127 Identities=14% Similarity=0.184 Sum_probs=86.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.+++.+.++.|++.|+++.++|+........+.+.+|+.... ...++.+... ....-.|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~-----------------~~~kp~~~ 164 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYK-PDFLVTPDDV-----------------PAGRPYPW 164 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCC-CSCCBCGGGS-----------------SCCTTSSH
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccC-hHheecCCcc-----------------CCCCCCHH
Confidence 46789999999999999999999999988888888888764211 0111111000 00111233
Q ss_pred hHHHHHHHHhhcC-CEEEEEcCCCCchhHHhhcC---eeEEecCc------------------------hHHHHhh-cch
Q 013242 246 HKYEIVKHLQARN-HICGMIGNGVNDAPALKKAD---IGIAVADA------------------------TDAARSA-ADI 296 (447)
Q Consensus 246 ~K~~iV~~lq~~g-~~v~~iGDg~ND~~al~~A~---vGIa~~~a------------------------~~~a~~a-AD~ 296 (447)
--..+++.++-.. ..|++|||+.||++|++.|| ++|+++++ .+..+.. ||+
T Consensus 165 ~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 244 (267)
T 1swv_A 165 MCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHF 244 (267)
T ss_dssp HHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCce
Confidence 3345566666555 68999999999999999999 56666655 3444444 999
Q ss_pred hccCCChhHHHHHHHH
Q 013242 297 VLTEPGLNVIITAVLI 312 (447)
Q Consensus 297 vl~~~~~~~i~~~i~~ 312 (447)
++ +++..+..++..
T Consensus 245 v~--~~~~el~~~l~~ 258 (267)
T 1swv_A 245 TI--ETMQELESVMEH 258 (267)
T ss_dssp EE--SSGGGHHHHHHH
T ss_pred ec--cCHHHHHHHHHH
Confidence 98 457888777654
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.64 E-value=3.6e-08 Score=90.34 Aligned_cols=126 Identities=15% Similarity=0.116 Sum_probs=87.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+... ....-.|+
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 151 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINK--INIVTRDDV-----------------SYGKPDPD 151 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTS--SCEECGGGS-----------------SCCTTSTH
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhh--heeeccccC-----------------CCCCCChH
Confidence 36789999999999999999999999999999999999985321 111111000 00111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCe---eEEec-CchHHHHhh-cchhccCCChhHHHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADI---GIAVA-DATDAARSA-ADIVLTEPGLNVIITAVLI 312 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~v---GIa~~-~a~~~a~~a-AD~vl~~~~~~~i~~~i~~ 312 (447)
--..+++.+.-....|++|||+.||+.|++.||+ +|+++ ++.+..+.. ||+++ +++..+...|+.
T Consensus 152 ~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~--~~~~el~~~l~~ 221 (233)
T 3s6j_A 152 LFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVY--EDPLDLLNHLDE 221 (233)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEE--SSHHHHHHTGGG
T ss_pred HHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEE--CCHHHHHHHHHH
Confidence 2234444554445679999999999999999999 55555 455555554 99998 458888877754
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.58 E-value=3.5e-08 Score=89.66 Aligned_cols=124 Identities=15% Similarity=0.110 Sum_probs=81.2
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhh
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 246 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~ 246 (447)
+.+++.+.++.+++.|+++.++|+..........+.+|+.... ...+..... ....-.|.-
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-----------------~~~k~~~~~ 150 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWF--DIIIGGEDV-----------------THHKPDPEG 150 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCC--SEEECGGGC-----------------SSCTTSTHH
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhhe--eeeeehhhc-----------------CCCCCChHH
Confidence 4689999999999999999999999988888888888875211 111110000 000011222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEe----cCchHHHHhh-cchhccCCChhHHHHHHH
Q 013242 247 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV----ADATDAARSA-ADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 247 K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~----~~a~~~a~~a-AD~vl~~~~~~~i~~~i~ 311 (447)
-..+++.++-....+++|||+.||++|++.||+++++ .++.+..+.. ||+++.+ +..+...|.
T Consensus 151 ~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~~--~~el~~~l~ 218 (225)
T 3d6j_A 151 LLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIIST--LGQLISVPE 218 (225)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEESS--GGGGC----
T ss_pred HHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEECC--HHHHHHhhh
Confidence 2344455554455799999999999999999999887 4555555554 8998854 666655553
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.57 E-value=4.9e-08 Score=89.66 Aligned_cols=126 Identities=10% Similarity=0.057 Sum_probs=91.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+... ....-.|+
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 159 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLF--DHVLSVDAV-----------------RLYKTAPA 159 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTC--SEEEEGGGT-----------------TCCTTSHH
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhc--CEEEEeccc-----------------CCCCcCHH
Confidence 46799999999999999999999999999999999999985321 111111000 01111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEe----cCchHHHHhhcchhccCCChhHHHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV----ADATDAARSAADIVLTEPGLNVIITAVLI 312 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~----~~a~~~a~~aAD~vl~~~~~~~i~~~i~~ 312 (447)
--..+++.++-....|++|||+.||+.|.+.||+++++ +++.+..+..+|+++ +++..+..++..
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~--~~~~el~~~l~~ 228 (233)
T 3umb_A 160 AYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAG--HDMRDLLQFVQA 228 (233)
T ss_dssp HHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEE--SSHHHHHHHHHC
T ss_pred HHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEE--CCHHHHHHHHHH
Confidence 33345556655566799999999999999999999999 566666677799998 458888887764
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=98.56 E-value=1.4e-07 Score=83.78 Aligned_cols=126 Identities=13% Similarity=0.124 Sum_probs=83.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcH---------------HHHHHHHHHhC--CCCCCCCcccccCCcchhhhhcCC
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQL---------------AIAKETGRRLG--MGTNMYPSSALSGQDRDESIVALP 228 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~---------------~~a~~ia~~lG--i~~~~~~~~~~~~~~~~~~~~~~~ 228 (447)
++.|++.++|+.|++.|+++.++|+... ..+..+.+.+| ++.-. .....+.+.
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~~~~~~~~~-------- 96 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAIF--MCPHGPDDG-------- 96 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEEE--EECCCTTSC--------
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEEE--EcCCCCCCC--------
Confidence 4779999999999999999999999985 55667777788 42100 000000000
Q ss_pred hhHHHhhccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCe---eEEecCchHHHH----hhcchhccCC
Q 013242 229 VDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI---GIAVADATDAAR----SAADIVLTEP 301 (447)
Q Consensus 229 ~~~~~~~~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~v---GIa~~~a~~~a~----~aAD~vl~~~ 301 (447)
..+..-.|+-=..+++.+.-....++||||+.||+.|.+.||+ +|+.+++..... ..+|+++.
T Consensus 97 --------~~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~-- 166 (179)
T 3l8h_A 97 --------CACRKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCE-- 166 (179)
T ss_dssp --------CSSSTTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEES--
T ss_pred --------CCCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEec--
Confidence 0011112222344556666566779999999999999999995 666666555444 45799984
Q ss_pred ChhHHHHHHH
Q 013242 302 GLNVIITAVL 311 (447)
Q Consensus 302 ~~~~i~~~i~ 311 (447)
++..+...+.
T Consensus 167 ~l~el~~~l~ 176 (179)
T 3l8h_A 167 DLAAVAEQLL 176 (179)
T ss_dssp SHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 4888777664
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.55 E-value=5.4e-08 Score=89.06 Aligned_cols=124 Identities=12% Similarity=0.136 Sum_probs=87.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+.++.|++.|+++.++|+........+.+.+|+.... ..++.+... ....-.|+
T Consensus 96 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 156 (230)
T 3um9_A 96 TPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSF--DHLISVDEV-----------------RLFKPHQK 156 (230)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGC--SEEEEGGGT-----------------TCCTTCHH
T ss_pred CCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhc--ceeEehhhc-----------------ccCCCChH
Confidence 57899999999999999999999999999999999999984210 001110000 00111223
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEe----cCchHHHHhhcchhccCCChhHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV----ADATDAARSAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~----~~a~~~a~~aAD~vl~~~~~~~i~~~i 310 (447)
--..+++.++-....|++|||+.||+.|.+.||+++++ +++.+..+..+|+++. ++..+...+
T Consensus 157 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l 223 (230)
T 3um9_A 157 VYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVS--DVGVLASRF 223 (230)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEES--SHHHHHHTC
T ss_pred HHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeC--CHHHHHHHH
Confidence 33445555555556799999999999999999999998 4555555668899884 477776554
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.53 E-value=6.4e-08 Score=89.60 Aligned_cols=124 Identities=13% Similarity=0.078 Sum_probs=84.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+... ....-.|+
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 170 (240)
T 3sd7_A 110 KIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYF--KYIAGSNLD-----------------GTRVNKNE 170 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEECTT-----------------SCCCCHHH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhE--EEEEecccc-----------------CCCCCCHH
Confidence 47899999999999999999999999999999999999985210 011110000 00000111
Q ss_pred hHHHHHHHHhhc-CCEEEEEcCCCCchhHHhhcCe---eEEecCchHH--HHhhcchhccCCChhHHHHHH
Q 013242 246 HKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADI---GIAVADATDA--ARSAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 246 ~K~~iV~~lq~~-g~~v~~iGDg~ND~~al~~A~v---GIa~~~a~~~--a~~aAD~vl~~~~~~~i~~~i 310 (447)
--..+++.++-. ...|++|||+.||+.|.+.||+ +|+++++... .+..||+++.+ +..+..+|
T Consensus 171 ~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~--~~el~~~l 239 (240)
T 3sd7_A 171 VIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVEN--VESIKDIL 239 (240)
T ss_dssp HHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESS--STTHHHHH
T ss_pred HHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECC--HHHHHHHh
Confidence 223344555555 6679999999999999999999 6666654333 35789999854 76666554
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.53 E-value=6.8e-08 Score=86.22 Aligned_cols=119 Identities=16% Similarity=0.114 Sum_probs=82.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
.+.|++.+.++.|++.|++++++|+....... ..+.+|+.... ..++..... ....-.|+
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f--~~~~~~~~~-----------------~~~Kp~~~ 144 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYF--TEILTSQSG-----------------FVRKPSPE 144 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGE--EEEECGGGC-----------------CCCTTSSH
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhe--eeEEecCcC-----------------CCCCCCcH
Confidence 36799999999999999999999999988887 88888874210 000000000 00111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee-EEecCchHHHHhhcchhccCCChhHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADATDAARSAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG-Ia~~~a~~~a~~aAD~vl~~~~~~~i~~~i 310 (447)
--..+++.++-....|++|||+.||++|++.||++ |+|+++. . .||+++. ++..+..++
T Consensus 145 ~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~---~a~~v~~--~~~el~~~l 204 (207)
T 2go7_A 145 AATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST-Y---EGNHRIQ--ALADISRIF 204 (207)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS-C---TTEEECS--STTHHHHHT
T ss_pred HHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEecCC-C---CCCEEeC--CHHHHHHHH
Confidence 23455566665566799999999999999999998 8888776 3 6898885 466665543
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.52 E-value=2.1e-07 Score=87.64 Aligned_cols=127 Identities=14% Similarity=0.119 Sum_probs=86.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+..... ..++.+... ....-.|.
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~-----------------~~~kp~~~ 172 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTP-ASTVFATDV-----------------VRGRPFPD 172 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCC-SEEECGGGS-----------------SSCTTSSH
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCC-ceEecHHhc-----------------CCCCCCHH
Confidence 467899999999999999999999999998888888888742211 111111000 00111122
Q ss_pred hHHHHHHHHhhcC-CEEEEEcCCCCchhHHhhcC---eeEEecC------------------------chHHHHh-hcch
Q 013242 246 HKYEIVKHLQARN-HICGMIGNGVNDAPALKKAD---IGIAVAD------------------------ATDAARS-AADI 296 (447)
Q Consensus 246 ~K~~iV~~lq~~g-~~v~~iGDg~ND~~al~~A~---vGIa~~~------------------------a~~~a~~-aAD~ 296 (447)
--..+++.+.-.. ..|+||||+.||+.|.+.|| ++|+++. +.+..+. .+|+
T Consensus 173 ~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~ 252 (277)
T 3iru_A 173 MALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHY 252 (277)
T ss_dssp HHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCE
Confidence 2345566666666 78999999999999999999 4566662 2344444 4899
Q ss_pred hccCCChhHHHHHHHH
Q 013242 297 VLTEPGLNVIITAVLI 312 (447)
Q Consensus 297 vl~~~~~~~i~~~i~~ 312 (447)
|+. ++..+..++..
T Consensus 253 v~~--~~~el~~~l~~ 266 (277)
T 3iru_A 253 VID--SVADLETVITD 266 (277)
T ss_dssp EES--SGGGTHHHHHH
T ss_pred Eec--CHHHHHHHHHH
Confidence 994 58888777754
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=98.52 E-value=2e-07 Score=86.70 Aligned_cols=137 Identities=13% Similarity=0.047 Sum_probs=90.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhH-HHhhc-cchhccC
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE-LIEKA-DGFAGVF 243 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~v~a~~~ 243 (447)
++.|++.++|+.|++.|+++.++|+.....+..+.+ |+.. + ..++.+...... . .+.. ..+.. ..+.+-.
T Consensus 77 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~--~-~~v~~~~~~~~~-~--~~~~~~~kp~p~~~~~~~ 148 (236)
T 2fea_A 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVE--K-DRIYCNHASFDN-D--YIHIDWPHSCKGTCSNQC 148 (236)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSC--G-GGEEEEEEECSS-S--BCEEECTTCCCTTCCSCC
T ss_pred CCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCC--C-CeEEeeeeEEcC-C--ceEEecCCCCcccccccc
Confidence 578999999999999999999999999988888887 6632 1 122211110000 0 0000 00000 0011113
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhh--cchhccCCChhHHHHHHHH
Q 013242 244 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSA--ADIVLTEPGLNVIITAVLI 312 (447)
Q Consensus 244 p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~a--AD~vl~~~~~~~i~~~i~~ 312 (447)
...|..+++.++.....++||||+.||++|.+.||+.++..+..+..... +|+++ +++..+..++..
T Consensus 149 ~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~~ 217 (236)
T 2fea_A 149 GCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPY--QDFYEIRKEIEN 217 (236)
T ss_dssp SSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECC--SSHHHHHHHHHT
T ss_pred CCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeechHHHHHHHHCCCCeeec--CCHHHHHHHHHH
Confidence 55788999999888889999999999999999999998754323333333 77777 558888777654
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.51 E-value=1.4e-07 Score=86.29 Aligned_cols=124 Identities=11% Similarity=0.088 Sum_probs=83.2
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCc---HHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccC
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQ---LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 243 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~---~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 243 (447)
+.+++.+.++.|++.|+++.++|+.. ........+.+|+.... ..++.+ ++. ....-.
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f--~~~~~~------------~~~-----~~~kp~ 160 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFI--DKTFFA------------DEV-----LSYKPR 160 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGC--SEEEEH------------HHH-----TCCTTC
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHh--hhheec------------ccc-----CCCCCC
Confidence 47999999999999999999999998 88888888888874210 001100 000 001111
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCC-CchhHHhhcCeeEEe---cCchHHHHhhcchhccCCChhHHHHHHH
Q 013242 244 PEHKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIGIAV---ADATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 244 p~~K~~iV~~lq~~g~~v~~iGDg~-ND~~al~~A~vGIa~---~~a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
|+--..+++.++-....|++|||+. ||+.|++.||+++++ +++.+..+..+|+++ +++..+..++.
T Consensus 161 ~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~ 230 (235)
T 2om6_A 161 KEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEI--PSIANLKDVIE 230 (235)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEE--SSGGGHHHHHH
T ss_pred HHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchH--hhHHHHHHHHH
Confidence 2222334455544456799999999 999999999999998 433333344578887 45777766654
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.50 E-value=2.4e-07 Score=84.96 Aligned_cols=124 Identities=18% Similarity=0.167 Sum_probs=88.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+.++.|++. +++.++|+........+.+.+|+.... ..++.+ ++. ....-.|+
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f--~~~~~~------------~~~-----~~~kp~~~ 159 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLF--DSITTS------------EEA-----GFFKPHPR 159 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEH------------HHH-----TBCTTSHH
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHc--ceeEec------------ccc-----CCCCcCHH
Confidence 4678999999999999 999999999999999999999884210 000000 000 00111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCC-CchhHHhhcC---eeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGV-NDAPALKKAD---IGIAVADATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~-ND~~al~~A~---vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
--..+++.++-....|++|||+. ||+.|.+.|| ++++++++.+..+..||+++. ++..+..++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~~--~~~el~~~l~ 227 (234)
T 3u26_A 160 IFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVS--DLREVIKIVD 227 (234)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEES--STHHHHHHHH
T ss_pred HHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEeeC--CHHHHHHHHH
Confidence 23445555555566799999997 9999999999 577777777777778999984 4888777665
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=98.49 E-value=1.9e-07 Score=86.67 Aligned_cols=126 Identities=18% Similarity=0.129 Sum_probs=83.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+.++.|++.|+++.++|+.....+....+. |+.....+..++.+... ....-.|+
T Consensus 109 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~-----------------~~~kp~~~ 170 (243)
T 3qxg_A 109 ERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDV-----------------KYGKPNPE 170 (243)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTC-----------------SSCTTSSH
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhC-----------------CCCCCChH
Confidence 5779999999999999999999999987777776666 77532100111111110 01111223
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee-EEecCch----HHHHhhcchhccCCChhHHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADAT----DAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG-Ia~~~a~----~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
--..+++.+.-....|++|||+.||+.|.+.||++ |.+.++. +..+..||+++ +++..+..++.
T Consensus 171 ~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~--~s~~el~~~l~ 239 (243)
T 3qxg_A 171 PYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLF--PSMQTLCDSWD 239 (243)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEE--SCHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEE--CCHHHHHHHHH
Confidence 33345555555566799999999999999999985 5554332 22234699998 45888877664
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=98.49 E-value=2.1e-07 Score=87.26 Aligned_cols=127 Identities=17% Similarity=0.086 Sum_probs=86.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccc-hhccCh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADG-FAGVFP 244 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~a~~~p 244 (447)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+..- +...++.+. + .. ...-.|
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~-f~~~i~~~~------------~-----~~~~~Kp~~ 171 (259)
T 4eek_A 110 TAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTEL-AGEHIYDPS------------W-----VGGRGKPHP 171 (259)
T ss_dssp EECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHH-HCSCEECGG------------G-----GTTCCTTSS
T ss_pred CcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhh-ccceEEeHh------------h-----cCcCCCCCh
Confidence 4678999999999999999999999999999999999987410 000001000 0 00 111112
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee-EEecCc-------hHHH-HhhcchhccCCChhHHHHHHHH
Q 013242 245 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADA-------TDAA-RSAADIVLTEPGLNVIITAVLI 312 (447)
Q Consensus 245 ~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG-Ia~~~a-------~~~a-~~aAD~vl~~~~~~~i~~~i~~ 312 (447)
+--..+++.++-....|++|||+.||+.|.+.||++ |.+..+ .+.. ...+|+++ +++..+...|..
T Consensus 172 ~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi--~~l~el~~~l~~ 246 (259)
T 4eek_A 172 DLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVL--TSHAELRAALAE 246 (259)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEE--CSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhh--CCHHHHHHHHHh
Confidence 222345555555556799999999999999999998 555433 2233 34589998 558888888765
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.48 E-value=2.2e-07 Score=85.95 Aligned_cols=128 Identities=16% Similarity=0.083 Sum_probs=81.5
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccCh
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 244 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p 244 (447)
.++.|++.+.++.|++.|+++.++|+..........+. |+.....+..++.+... ....-.|
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~-----------------~~~kp~~ 168 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDV-----------------KYGKPNP 168 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGC-----------------SSCTTSS
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccC-----------------CCCCCCC
Confidence 35779999999999999999999999988777777777 77532100111111100 0111122
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee-EEecCc--hH--HHHhhcchhccCCChhHHHHHHHH
Q 013242 245 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADA--TD--AARSAADIVLTEPGLNVIITAVLI 312 (447)
Q Consensus 245 ~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG-Ia~~~a--~~--~a~~aAD~vl~~~~~~~i~~~i~~ 312 (447)
+--..+++.+.-....|++|||+.||+.|.+.||++ |++.++ .. ..+..||+++. ++..+..++..
T Consensus 169 ~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~--~~~el~~~l~~ 239 (247)
T 3dv9_A 169 EPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFH--SMPDFNKNWET 239 (247)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEES--SHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEEC--CHHHHHHHHHH
Confidence 333445566665566799999999999999999975 444432 22 22347999984 48877766653
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.48 E-value=9.7e-08 Score=89.17 Aligned_cols=122 Identities=16% Similarity=0.169 Sum_probs=83.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+... ....-.|+
T Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f--~~~~~~~~~-----------------~~~Kp~~~ 174 (243)
T 2hsz_A 114 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLF--SEMLGGQSL-----------------PEIKPHPA 174 (243)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC--SEEECTTTS-----------------SSCTTSSH
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheE--EEEEecccC-----------------CCCCcCHH
Confidence 57799999999999999999999999999999999999984210 111111000 00111233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEE-ecC----chHHHHhhcchhccCCChhHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-VAD----ATDAARSAADIVLTEPGLNVIIT 308 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa-~~~----a~~~a~~aAD~vl~~~~~~~i~~ 308 (447)
--..+++.++.....|++|||+.||++|.+.||++++ +.. +.+..+..+|+++.+ +..+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~--~~el~~ 240 (243)
T 2hsz_A 175 PFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDD--FADILK 240 (243)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESS--GGGGGG
T ss_pred HHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECC--HHHHHH
Confidence 3445556666556679999999999999999999844 432 233446678988843 555543
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.47 E-value=7.1e-08 Score=96.95 Aligned_cols=113 Identities=14% Similarity=0.167 Sum_probs=74.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhcc-chhccCh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD-GFAGVFP 244 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~a~~~p 244 (447)
.+.|++++.|+.|+++|++|+|+||.....+..+|+++|++-.+.+..++ |......-.. .+..... ..--+..
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vi-g~~l~~~~dG----~~tg~~~~~~p~~~~ 295 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVL-GLRLMKDDEG----KILPKFDKDFPISIR 295 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEE-EECEEECTTC----CEEEEECTTSCCCST
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEE-EeEEEEecCC----ceeeeecCccceeCC
Confidence 47899999999999999999999999999999999999985433222222 2111000000 0000000 0011346
Q ss_pred hhHHHHHHHHhhc---CCEEEEEcCCCCchhHHhh-cCeeEEe
Q 013242 245 EHKYEIVKHLQAR---NHICGMIGNGVNDAPALKK-ADIGIAV 283 (447)
Q Consensus 245 ~~K~~iV~~lq~~---g~~v~~iGDg~ND~~al~~-A~vGIa~ 283 (447)
+.|...|+.+... ...++++|||.||.+||+. +|.++++
T Consensus 296 ~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~l 338 (385)
T 4gxt_A 296 EGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSL 338 (385)
T ss_dssp HHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEE
T ss_pred CchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEE
Confidence 7899999876433 2348899999999999986 4554444
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.47 E-value=2.8e-07 Score=84.66 Aligned_cols=122 Identities=10% Similarity=0.072 Sum_probs=83.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+... ....-.|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~-----------------~~~Kp~~~ 163 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYF--DSIIGSGDT-----------------GTIKPSPE 163 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEETSS-----------------SCCTTSSH
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhhe--eeEEccccc-----------------CCCCCChH
Confidence 46899999999999999999999999999999999999985210 011110000 00111223
Q ss_pred hHHHHHHHHhhcCC-EEEEEcCCCCchhHHhhcCe-eEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 013242 246 HKYEIVKHLQARNH-ICGMIGNGVNDAPALKKADI-GIAVADATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 246 ~K~~iV~~lq~~g~-~v~~iGDg~ND~~al~~A~v-GIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
--..+++.++-... .|++|||+.||+.|.+.||+ +|.++++.+ ..+|+++ +++..+..++.
T Consensus 164 ~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~---~~~~~~~--~~~~el~~~l~ 226 (231)
T 3kzx_A 164 PVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI---IKDILSF--KNFYDIRNFIC 226 (231)
T ss_dssp HHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEECC--------CCEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC---CCCceee--CCHHHHHHHHH
Confidence 33455666665565 79999999999999999997 677776654 3567777 45888776664
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=1.1e-07 Score=90.69 Aligned_cols=129 Identities=11% Similarity=-0.003 Sum_probs=86.2
Q ss_pred CCCCcchHHHHHHHHhCCC--eEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhcc
Q 013242 165 DPPIHDSAETIRRALSLGL--GVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 242 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi--~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~ 242 (447)
-++.|++.++++.|++.|+ +++++|+.....+..+.+.+|+.... ..++.+...... .....-
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~f--d~v~~~~~~~~~-------------~~~~Kp 205 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLF--DGLTYCDYSRTD-------------TLVCKP 205 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSC--SEEECCCCSSCS-------------SCCCTT
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCccccc--ceEEEeccCCCc-------------ccCCCc
Confidence 4578999999999999999 99999999999999999999986321 111111100000 001111
Q ss_pred ChhhHHHHHHHHhhcC-CEEEEEcCCCCchhHHhhcCeeEEecCchHHH------HhhcchhccCCChhHHHHHH
Q 013242 243 FPEHKYEIVKHLQARN-HICGMIGNGVNDAPALKKADIGIAVADATDAA------RSAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 243 ~p~~K~~iV~~lq~~g-~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a------~~aAD~vl~~~~~~~i~~~i 310 (447)
.|+--..+++.+.-.. ..|++|||+.||+.|.+.||+|++|+++.... ...||+++. ++..+..++
T Consensus 206 ~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~--sl~el~~~l 278 (282)
T 3nuq_A 206 HVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVIS--DILELPHVV 278 (282)
T ss_dssp SHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEES--SGGGGGGTS
T ss_pred CHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeC--CHHHHHHHh
Confidence 2222234445555555 78999999999999999999999987543322 236788884 466655443
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.44 E-value=3e-07 Score=84.31 Aligned_cols=121 Identities=12% Similarity=0.083 Sum_probs=79.0
Q ss_pred CCcchHHHHHHHHhC-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 167 PIHDSAETIRRALSL-GLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~-Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
+.|++.+.++.|++. |+++.++|+.....+....+.+|+.... . ..+.+.+. . ..|+
T Consensus 94 ~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f-~-~~~~~~~~------------------~--~~~k 151 (234)
T 2hcf_A 94 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYF-P-FGAFADDA------------------L--DRNE 151 (234)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTC-S-CEECTTTC------------------S--SGGG
T ss_pred cCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhc-C-cceecCCC------------------c--Cccc
Confidence 679999999999999 9999999999999888899999885321 1 11111100 0 0111
Q ss_pred hHH----HHHHHHh--hcCCEEEEEcCCCCchhHHhhcCee---EEecCchHHHH-h-hcchhccCCChhHHHHHHH
Q 013242 246 HKY----EIVKHLQ--ARNHICGMIGNGVNDAPALKKADIG---IAVADATDAAR-S-AADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 246 ~K~----~iV~~lq--~~g~~v~~iGDg~ND~~al~~A~vG---Ia~~~a~~~a~-~-aAD~vl~~~~~~~i~~~i~ 311 (447)
.+. .+.+.+. -....|++|||+.||++|.+.||++ |+++++..... . .+|+++.+ +..+...+.
T Consensus 152 ~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~~--~~el~~~l~ 226 (234)
T 2hcf_A 152 LPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKN--FAETDEVLA 226 (234)
T ss_dssp HHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESC--SCCHHHHHH
T ss_pred hHHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeCC--HHhHHHHHH
Confidence 122 2334444 3345799999999999999999955 44454433333 2 28888854 555554443
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.44 E-value=1.1e-07 Score=91.46 Aligned_cols=66 Identities=23% Similarity=0.294 Sum_probs=58.9
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 013242 246 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 246 ~K~~iV~~lq~~----g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
+|...++.+.+. ...|+++||+.||++|++.|++||+|+++.+.++..||+|+.+++.+||.++|+
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~~~~~~a~~v~~~~~~dGVa~~i~ 285 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMK 285 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCCHHHHhhCceeecCCCcChHHHHHH
Confidence 588888777664 346999999999999999999999999999999999999999999999998886
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.43 E-value=1.1e-07 Score=85.44 Aligned_cols=121 Identities=17% Similarity=0.113 Sum_probs=83.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+.++.|++.|++++++|+.....+..+.+.+|+.... ..++.+... ....-.|+
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 149 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFF--DIVLSGEEF-----------------KESKPNPE 149 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGC-----------------SSCTTSSH
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhhe--eeEeecccc-----------------cCCCCChH
Confidence 36789999999999999999999999999999999999984210 011110000 01111233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCc--hHHHHhhcchhccCCChhHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADA--TDAARSAADIVLTEPGLNVII 307 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a--~~~a~~aAD~vl~~~~~~~i~ 307 (447)
--..+++.++-....|++|||+.||+.|.+.||+++++.+. .+..+..+|+++.+ +..+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~--~~el~ 211 (214)
T 3e58_A 150 IYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDS--LTDVL 211 (214)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESS--GGGGG
T ss_pred HHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHHH--HHHHH
Confidence 33455566665566799999999999999999998887532 33334678888854 55543
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.43 E-value=2.7e-07 Score=84.82 Aligned_cols=124 Identities=14% Similarity=0.127 Sum_probs=85.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+... + ..++.+.+. ....-.|+
T Consensus 83 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~-f-~~i~~~~~~-----------------~~~Kp~~~ 143 (222)
T 2nyv_A 83 KPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGY-F-DLIVGGDTF-----------------GEKKPSPT 143 (222)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG-C-SEEECTTSS-----------------CTTCCTTH
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHH-h-eEEEecCcC-----------------CCCCCChH
Confidence 4689999999999999999999999999989999999997421 0 111111100 01112233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee-EEecC--chHHHHhhcchhccCCChhHHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVAD--ATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG-Ia~~~--a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
-...+++.++.....|++|||+.||++|.+.||+. |++.. +.... ..+|+++. ++..+...+.
T Consensus 144 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~--~~~el~~~l~ 209 (222)
T 2nyv_A 144 PVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLS--RPSDLVKLMD 209 (222)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEES--STTHHHHHHH
T ss_pred HHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEEC--CHHHHHHHHH
Confidence 34455666655566799999999999999999988 66643 22222 56888874 4777766654
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=1.3e-07 Score=88.78 Aligned_cols=67 Identities=16% Similarity=0.120 Sum_probs=58.3
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhh-------cchhccCCChhHHHHHHHH
Q 013242 246 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSA-------ADIVLTEPGLNVIITAVLI 312 (447)
Q Consensus 246 ~K~~iV~~lq~~----g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~a-------AD~vl~~~~~~~i~~~i~~ 312 (447)
.|...++.+.+. ...|+++||+.||++|++.|++||+|+|+.+.++.. ||+++.+++.++|.++|+.
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~~ 239 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcCCcHHHHHHHhcccccceeecCCcchhHHHHHHHH
Confidence 588888777654 245999999999999999999999999999999985 8899999999999988863
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.40 E-value=3.9e-07 Score=83.00 Aligned_cols=117 Identities=12% Similarity=0.045 Sum_probs=79.8
Q ss_pred CCCcchHHHHHHHHhCC-CeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhcc--
Q 013242 166 PPIHDSAETIRRALSLG-LGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV-- 242 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~G-i~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~-- 242 (447)
++.|++.+.++.|++.| +++.++|+........+.+.+|+.... .. +++.-
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f--~~------------------------~~~~~kp 158 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYF--DH------------------------IEVMSDK 158 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGC--SE------------------------EEEESCC
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhh--he------------------------eeecCCC
Confidence 46789999999999999 999999999988888999999884210 00 11111
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCC-CchhHHhhcCeeEEe-------cCchHHHHh-hcchhccCCChhHHHHHH
Q 013242 243 FPEHKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIGIAV-------ADATDAARS-AADIVLTEPGLNVIITAV 310 (447)
Q Consensus 243 ~p~~K~~iV~~lq~~g~~v~~iGDg~-ND~~al~~A~vGIa~-------~~a~~~a~~-aAD~vl~~~~~~~i~~~i 310 (447)
.|+--..+++.+.-....|++|||+. ||+.|.+.||+++++ +++...... .+|+++. ++..+..+|
T Consensus 159 k~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~--~l~el~~~l 233 (234)
T 3ddh_A 159 TEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVK--RLDDLLSLL 233 (234)
T ss_dssp SHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECS--SGGGHHHHC
T ss_pred CHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecc--cHHHHHHhc
Confidence 12222234444444456799999997 999999999999887 233333233 3488884 477776543
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=98.39 E-value=3.3e-07 Score=84.88 Aligned_cols=124 Identities=14% Similarity=0.089 Sum_probs=83.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+... ....-.|+
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~~ 165 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVL--DSCLSADDL-----------------KIYKPDPR 165 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGT-----------------TCCTTSHH
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHc--CEEEEcccc-----------------CCCCCCHH
Confidence 47799999999999999999999999999999999999984210 011111000 01111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEe---cCchHHHHhhc-chhccCCChhHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV---ADATDAARSAA-DIVLTEPGLNVIITAV 310 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~---~~a~~~a~~aA-D~vl~~~~~~~i~~~i 310 (447)
--..+++.+.-....|++|||+.||+.|.+.||+..+. ++..+..+..+ |+++. ++..+...+
T Consensus 166 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~--~~~el~~~l 232 (240)
T 2no4_A 166 IYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQVN--SLSELWPLL 232 (240)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEES--SGGGHHHHH
T ss_pred HHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceeeC--CHHHHHHHH
Confidence 33445555555556799999999999999999966443 33322233456 88874 477776655
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=98.38 E-value=1.9e-07 Score=85.86 Aligned_cols=125 Identities=10% Similarity=0.078 Sum_probs=85.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+... ....-.|+
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~~ 155 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF--DHLLSVDPV-----------------QVYKPDNR 155 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEESGGG-----------------TCCTTSHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhh--heEEEeccc-----------------CCCCCCHH
Confidence 47799999999999999999999999999899999999884210 111111000 01112233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEec----CchHHHHhhcchhccCCChhHHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA----DATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~----~a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
--..+++.+.-....|++|||+.||+.|.+.||+++++- +..+..+..+|+++. ++..+...+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l~ 223 (232)
T 1zrn_A 156 VYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVT--SLRAVVELFE 223 (232)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEES--SHHHHHTTC-
T ss_pred HHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEEC--CHHHHHHHHH
Confidence 334455666555567999999999999999999998883 222333456888874 4777665543
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.36 E-value=2.1e-06 Score=79.44 Aligned_cols=125 Identities=14% Similarity=0.185 Sum_probs=83.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+... ....-.|+
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~~ 154 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFF--EHVIISDFE-----------------GVKKPHPK 154 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGC--SEEEEGGGG-----------------TCCTTCHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhc--cEEEEeCCC-----------------CCCCCCHH
Confidence 36789999999999999999999999988888899999974210 011110000 00111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCC-CchhHHhhcCeeEEe---cCchHHHHh---hcchhccCCChhHHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIGIAV---ADATDAARS---AADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~-ND~~al~~A~vGIa~---~~a~~~a~~---aAD~vl~~~~~~~i~~~i~ 311 (447)
--..+++.+.-....|++|||+. ||+.|.+.||++++. +........ .+|+++. ++..+...+.
T Consensus 155 ~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i~--~~~el~~~l~ 225 (241)
T 2hoq_A 155 IFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEID--NLESLLEVLA 225 (241)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEES--STTHHHHHHH
T ss_pred HHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEEC--CHHHHHHHHH
Confidence 22344455555556799999998 999999999998654 333333332 6888884 4777766554
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.35 E-value=6.9e-07 Score=81.90 Aligned_cols=122 Identities=12% Similarity=0.099 Sum_probs=83.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+.++.|+ .|+++.++|+..........+.+|+.... ..++.+... ....-.|+
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 166 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYF--KKIILSEDL-----------------GVLKPRPE 166 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGC--SEEEEGGGT-----------------TCCTTSHH
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhc--eeEEEeccC-----------------CCCCCCHH
Confidence 46789999999999 99999999999998889999999884210 011110000 00111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCC-CchhHHhhcCeeEEecCchH--HHHhhcchhccCCChhHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIGIAVADATD--AARSAADIVLTEPGLNVIITA 309 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~-ND~~al~~A~vGIa~~~a~~--~a~~aAD~vl~~~~~~~i~~~ 309 (447)
--..+++.+.-....|++|||+. ||+.|.+.||+++++.+... .....+|+++.+ +..+..+
T Consensus 167 ~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~s--l~e~~~~ 231 (240)
T 3qnm_A 167 IFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHS--LKELMNL 231 (240)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEESS--THHHHHH
T ss_pred HHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEECC--HHHHHHH
Confidence 22334444544456799999996 99999999999999976443 455678999854 6665543
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=1.3e-06 Score=79.97 Aligned_cols=135 Identities=18% Similarity=0.202 Sum_probs=83.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCc---------------HHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQ---------------LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVD 230 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~---------------~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (447)
++.|++.++|+.|+++|+++.++|+.. ...+..+.+.+|+. +..........+... .
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---f~~~~~~~~~~~~~~-----~ 121 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD---LDGIYYCPHHPQGSV-----E 121 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC---CSEEEEECCBTTCSS-----G
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc---eEEEEECCcCCCCcc-----c
Confidence 678999999999999999999999998 46777888888985 111111110000000 0
Q ss_pred HHHhhccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee--EEe--cCc-hHHHHhhcchhccCCChhH
Q 013242 231 ELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG--IAV--ADA-TDAARSAADIVLTEPGLNV 305 (447)
Q Consensus 231 ~~~~~~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG--Ia~--~~a-~~~a~~aAD~vl~~~~~~~ 305 (447)
.. .....+..-.|+--..+++.+.-....++||||+.||+.|.+.||+. |.+ +.. .+.....+|+++. ++..
T Consensus 122 ~~-~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~--~l~e 198 (211)
T 2gmw_A 122 EF-RQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLN--SLAD 198 (211)
T ss_dssp GG-BSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEES--CGGG
T ss_pred cc-CccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeC--CHHH
Confidence 00 00000111223333445555555556799999999999999999964 344 322 2333456898884 4777
Q ss_pred HHHHHH
Q 013242 306 IITAVL 311 (447)
Q Consensus 306 i~~~i~ 311 (447)
+..++.
T Consensus 199 l~~~l~ 204 (211)
T 2gmw_A 199 LPQAIK 204 (211)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776654
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=98.31 E-value=1.1e-06 Score=81.62 Aligned_cols=122 Identities=14% Similarity=0.185 Sum_probs=81.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhh
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 246 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~ 246 (447)
+.|++.++++.|++.|+++.++|+.....+..+.+.+|+. . + ..++.+.... ...-.|+-
T Consensus 111 ~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~-f-~~~~~~~~~~-----------------~~Kp~p~~ 170 (240)
T 2hi0_A 111 PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-S-F-DFALGEKSGI-----------------RRKPAPDM 170 (240)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-T-C-SEEEEECTTS-----------------CCTTSSHH
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-c-e-eEEEecCCCC-----------------CCCCCHHH
Confidence 5689999999999999999999999988888889999874 1 1 1111111100 01111222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee---EEecCch-HHHH-hhcchhccCCChhHHHHHH
Q 013242 247 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIG---IAVADAT-DAAR-SAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 247 K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG---Ia~~~a~-~~a~-~aAD~vl~~~~~~~i~~~i 310 (447)
=..+++.+.-....|++|||+.||+.|.+.||+. |+++++. +..+ ..+|+++. ++..+...+
T Consensus 171 ~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~--~~~el~~~l 237 (240)
T 2hi0_A 171 TSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVD--TAEKLEEAI 237 (240)
T ss_dssp HHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEEC--SHHHHHHHH
T ss_pred HHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEEC--CHHHHHHHh
Confidence 2344455554556799999999999999999994 3344322 3333 46888884 477766544
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.27 E-value=5.3e-07 Score=83.77 Aligned_cols=122 Identities=12% Similarity=0.114 Sum_probs=84.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+.++.|++. +++.++|+........+.+.+|+. +. .++.. +.+ ....-.|+
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~---f~-~~~~~------------~~~-----~~~kp~~~ 177 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP---WD-MLLCA------------DLF-----GHYKPDPQ 177 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC---CS-EECCH------------HHH-----TCCTTSHH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC---cc-eEEee------------ccc-----ccCCCCHH
Confidence 4578999999999985 999999999999899999999984 10 11100 000 00111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecC--------chHHH--HhhcchhccCCChhHHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVAD--------ATDAA--RSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~--------a~~~a--~~aAD~vl~~~~~~~i~~~i~ 311 (447)
--..+++.+.-....|++|||+.||+.|.+.||++++|.+ +.+.. +..||+|+ +++..+..++.
T Consensus 178 ~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~--~~l~el~~~l~ 251 (254)
T 3umc_A 178 VYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIA--SDLLDLHRQLA 251 (254)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEE--CCHHHHHHHhc
Confidence 2234455555455679999999999999999999999976 22222 56789998 45888877664
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=98.26 E-value=1.9e-06 Score=76.14 Aligned_cols=131 Identities=14% Similarity=0.138 Sum_probs=84.1
Q ss_pred cccCceEEEeeEeecccC--CCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCchhh--hccceEEEEEecCCCCceEEE
Q 013242 12 LTLNKLTVDKNLIEIFAG--GVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEA--RADIQEVHFLPFDPTGKRTAL 87 (447)
Q Consensus 12 LT~n~~~v~~~~i~~~~~--~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~~~~--~~~~~~~~~~pF~~~~kr~~v 87 (447)
||+|+|.|.++.. +.. +.+.++++.+++.++..++| |++.||+.++...... .......+.+| .+-+.-
T Consensus 1 LT~G~p~V~~v~~--~~~~~~~~~~~lL~laaslE~~SeH-PlA~AIv~~a~~~~~~~~~~~~~~f~~i~----G~Gv~a 73 (165)
T 2arf_A 1 AGHMVPRVMRVLL--LGDVATLPLRKVLAVVGTAEASSEH-PLGVAVTKYCKEELGTETLGYCTDFQAVP----GCGIGC 73 (165)
T ss_dssp CCCCCCCEEEEEE--CCCTTTSCHHHHHHHHHHHHTTSCS-TTHHHHHHHHHHHHTCCCCCCEEEEEEET----TTEEEE
T ss_pred CCCceeEEEEEEe--eCCcCCCCHHHHHHHHHHHHccCCC-hHHHHHHHHHHHhcCCCCCCCcCceEEec----CccEEE
Confidence 8999999987532 221 35788999999999988877 9999999986422000 01222333333 122222
Q ss_pred EEEec------------------------------CCeEEEEEcCcHHHHHhhccCChhhHHHHHHHHHHHHHhhhhhhh
Q 013242 88 TYIDS------------------------------EGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLA 137 (447)
Q Consensus 88 ~~~~~------------------------------~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~ 137 (447)
.+.+. ..+...+..|+++++.+..- .....+...+..+..+|..++.
T Consensus 74 ~v~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi---~~~~~~~~~~~~~~~~G~T~v~ 150 (165)
T 2arf_A 74 KVSNVEGILAHSERPLSAPASHLNEAGSLPAEKDAVPQTFSVLIGNREWLRRNGL---TISSDVSDAMTDHEMKGQTAIL 150 (165)
T ss_dssp EEECHHHHHSCCCCCCCCCCCCSSSSCCCCCCCCCCCCEEEEEEECHHHHHHHHC---SSCHHHHHHHHHHHTTTSEEEE
T ss_pred EEcCcccccccccccccccccccccccccccccccCCCceEEEEcCHHHHHhcCC---CCCHHHHHHHHHHHhCCCeEEE
Confidence 23221 12235678899999865321 1222344556677788999999
Q ss_pred hhhcccCCCCcCCCCCCcEEEEeccCCC
Q 013242 138 VAYQEVPEGSKESSGSPWQFIGLIPLFD 165 (447)
Q Consensus 138 vA~~~~~~~~~~~~e~~~~~lG~i~l~d 165 (447)
||.+. .++|++++.|
T Consensus 151 va~dg-------------~~~g~i~l~D 165 (165)
T 2arf_A 151 VAIDG-------------VLCGMIAIAD 165 (165)
T ss_dssp EEETT-------------EEEEEEEECC
T ss_pred EEECC-------------EEEEEEEEEC
Confidence 99887 8999999987
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.26 E-value=1.1e-06 Score=83.72 Aligned_cols=114 Identities=14% Similarity=0.031 Sum_probs=79.0
Q ss_pred CCcchHHHHHHHHhC-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 167 PIHDSAETIRRALSL-GLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~-Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
+.+++.+.++.|++. |+++.++|+.....+....+.+|+.. + ..++.+.+.. ...-.|+
T Consensus 115 ~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~--f-~~i~~~~~~~-----------------~~kp~~~ 174 (275)
T 2qlt_A 115 EVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKR--P-EYFITANDVK-----------------QGKPHPE 174 (275)
T ss_dssp ECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCC--C-SSEECGGGCS-----------------SCTTSSH
T ss_pred cCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCc--c-CEEEEcccCC-----------------CCCCChH
Confidence 578999999999999 99999999999999999999998852 1 1111111100 0011222
Q ss_pred hHHHHHHHHhh-------cCCEEEEEcCCCCchhHHhhcCeeEEe---cCchHHHHh-hcchhccC
Q 013242 246 HKYEIVKHLQA-------RNHICGMIGNGVNDAPALKKADIGIAV---ADATDAARS-AADIVLTE 300 (447)
Q Consensus 246 ~K~~iV~~lq~-------~g~~v~~iGDg~ND~~al~~A~vGIa~---~~a~~~a~~-aAD~vl~~ 300 (447)
--..+.+.+.. ....|++|||+.||++|++.||+++++ +++.+..+. .||+++.+
T Consensus 175 ~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~ 240 (275)
T 2qlt_A 175 PYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKN 240 (275)
T ss_dssp HHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESS
T ss_pred HHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC
Confidence 23445556665 556799999999999999999977666 444344443 58988754
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=98.26 E-value=1.8e-06 Score=79.16 Aligned_cols=124 Identities=11% Similarity=0.102 Sum_probs=82.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+.++.|++. +++.++|+.....+....+.+|+..-. ..++.+... ....-.|+
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 162 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFF--KDIFVSEDT-----------------GFQKPMKE 162 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGC--SEEEEGGGT-----------------TSCTTCHH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhh--heEEEeccc-----------------CCCCCChH
Confidence 5778999999999999 999999999998888899999884210 001100000 00111122
Q ss_pred hHHHHHHHHh-hcCCEEEEEcCCC-CchhHHhhcCee-EEecC--chHHHHhhcchhccCCChhHHHHHHH
Q 013242 246 HKYEIVKHLQ-ARNHICGMIGNGV-NDAPALKKADIG-IAVAD--ATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 246 ~K~~iV~~lq-~~g~~v~~iGDg~-ND~~al~~A~vG-Ia~~~--a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
--..+.+.++ -....|++|||+. ||+.|.+.||++ |.+.. ..+..+..+|+++. ++..+..++.
T Consensus 163 ~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~--~~~el~~~l~ 231 (238)
T 3ed5_A 163 YFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIR--KLEELYHILN 231 (238)
T ss_dssp HHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEES--SGGGHHHHHT
T ss_pred HHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEEC--CHHHHHHHHH
Confidence 2223334443 3345699999998 999999999995 44443 35556677899984 4888777664
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=98.24 E-value=1.2e-06 Score=81.88 Aligned_cols=123 Identities=14% Similarity=0.155 Sum_probs=84.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++++.|+ |+++.++|+.....+..+.+.+|+.... ..++.+... ....-.|+
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f--~~~~~~~~~-----------------~~~Kp~~~ 151 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF--DAVISVDAK-----------------RVFKPHPD 151 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGG-----------------TCCTTSHH
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhc--cEEEEcccc-----------------CCCCCCHH
Confidence 57799999999999 9999999999999999999999874210 111110000 01111233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCc---------------------------hHHHHhhcchhc
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADA---------------------------TDAARSAADIVL 298 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a---------------------------~~~a~~aAD~vl 298 (447)
--..+++.+.-....|++|||+.||+.|.+.||++.++.+. .+..+..+|+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (253)
T 1qq5_A 152 SYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVV 231 (253)
T ss_dssp HHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEE
T ss_pred HHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeee
Confidence 33445555554556799999999999999999999888655 122234578887
Q ss_pred cCCChhHHHHHHH
Q 013242 299 TEPGLNVIITAVL 311 (447)
Q Consensus 299 ~~~~~~~i~~~i~ 311 (447)
+++..+...+.
T Consensus 232 --~~~~el~~~l~ 242 (253)
T 1qq5_A 232 --PALGDLPRLVR 242 (253)
T ss_dssp --SSGGGHHHHHH
T ss_pred --CCHHHHHHHHH
Confidence 45777776664
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=98.23 E-value=2.4e-06 Score=75.64 Aligned_cols=107 Identities=11% Similarity=0.038 Sum_probs=71.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhh
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 246 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~ 246 (447)
+.|++.+.++.|++.|+++.++|+... .+....+.+|+.... ...+.+... ....-.|+-
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f--~~~~~~~~~-----------------~~~kp~~~~ 142 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYF--TEVVTSSSG-----------------FKRKPNPES 142 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGE--EEEECGGGC-----------------CCCTTSCHH
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhhe--eeeeecccc-----------------CCCCCCHHH
Confidence 679999999999999999999998764 566777888874210 000000000 000111222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcc
Q 013242 247 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAAD 295 (447)
Q Consensus 247 K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD 295 (447)
-..+++.+.-. .|++|||+.||++|++.||+++++-+.....++..+
T Consensus 143 ~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~l~ 189 (190)
T 2fi1_A 143 MLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLD 189 (190)
T ss_dssp HHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHT
T ss_pred HHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEEECCCCChhhccC
Confidence 23344444433 799999999999999999999888776666666554
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=98.23 E-value=1.4e-06 Score=80.55 Aligned_cols=121 Identities=10% Similarity=0.065 Sum_probs=84.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccCh-
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP- 244 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p- 244 (447)
++.|++.+.++.|++. +++.++|+........+.+.+|+. +. .++.+ + ......|
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~---f~-~~~~~------------~-------~~~~~kp~ 171 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIP---WD-VIIGS------------D-------INRKYKPD 171 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCC---CS-CCCCH------------H-------HHTCCTTS
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCC---ee-EEEEc------------C-------cCCCCCCC
Confidence 4678999999999996 999999999999999999999984 10 01100 0 0111112
Q ss_pred -hhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHH----------HHhhcchhccCCChhHHHHHHHH
Q 013242 245 -EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDA----------ARSAADIVLTEPGLNVIITAVLI 312 (447)
Q Consensus 245 -~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~----------a~~aAD~vl~~~~~~~i~~~i~~ 312 (447)
+--..+++.+.-....|++|||+.||+.|.+.||++++|.+.... .+..+|+++ +++..+..++..
T Consensus 172 ~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~--~~~~el~~~l~~ 248 (254)
T 3umg_A 172 PQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISA--TDITDLAAQLRA 248 (254)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEE--SSHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEE--CCHHHHHHHhcC
Confidence 212233444444456799999999999999999999999752211 256789888 458888877754
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.23 E-value=1.4e-07 Score=85.33 Aligned_cols=119 Identities=13% Similarity=0.097 Sum_probs=79.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+.... ..++.+... ....-.|+
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~KP~~~ 142 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRM--AVTISADDT-----------------PKRKPDPL 142 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGE--EEEECGGGS-----------------SCCTTSSH
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhc--cEEEecCcC-----------------CCCCCCcH
Confidence 4689999999999999 999999999998888888888874110 000100000 00111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecC----chHHHHhhcchhccCCChhHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVAD----ATDAARSAADIVLTEPGLNVII 307 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~----a~~~a~~aAD~vl~~~~~~~i~ 307 (447)
--..+++.++-....|++|||+.||++|.+.||+++++.+ +.+..+. ||+++.+ +..+.
T Consensus 143 ~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~~--~~el~ 205 (209)
T 2hdo_A 143 PLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQK--PLDIL 205 (209)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEESS--GGGGG
T ss_pred HHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeCC--HHHHH
Confidence 2344555555555679999999999999999999998743 3344444 8888854 55443
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=98.22 E-value=1.2e-06 Score=80.18 Aligned_cols=122 Identities=11% Similarity=0.114 Sum_probs=81.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++++.|++ |+++.++|+..........+.++- .+ ..++.+. ++ ....-.|+
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~---~f-d~i~~~~------------~~-----~~~KP~~~ 156 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGV---EF-DHIITAQ------------DV-----GSYKPNPN 156 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCS---CC-SEEEEHH------------HH-----TSCTTSHH
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCC---cc-CEEEEcc------------cc-----CCCCCCHH
Confidence 578999999999999 899999999988777776665431 11 1111100 00 01122333
Q ss_pred hHHHH---HHHHhhcCCEEEEEcCCC-CchhHHhhcCeeEEecCch-----------HHHHhhcchhccCCChhHHHHHH
Q 013242 246 HKYEI---VKHLQARNHICGMIGNGV-NDAPALKKADIGIAVADAT-----------DAARSAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 246 ~K~~i---V~~lq~~g~~v~~iGDg~-ND~~al~~A~vGIa~~~a~-----------~~a~~aAD~vl~~~~~~~i~~~i 310 (447)
-...+ ++.++-....|++|||+. ||+.|.+.||+++++.+.. +..+..||+++. ++..+..++
T Consensus 157 ~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~--~~~el~~~l 234 (240)
T 3smv_A 157 NFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFN--SMGEMAEAH 234 (240)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEES--SHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeC--CHHHHHHHH
Confidence 33344 344444556799999996 9999999999999995432 233477899984 588877766
Q ss_pred H
Q 013242 311 L 311 (447)
Q Consensus 311 ~ 311 (447)
.
T Consensus 235 ~ 235 (240)
T 3smv_A 235 K 235 (240)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.22 E-value=4.4e-07 Score=84.56 Aligned_cols=123 Identities=15% Similarity=0.136 Sum_probs=76.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHH-HHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccCh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG-RRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 244 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia-~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p 244 (447)
++.|++.++++.|++.|+++.++|+.......... +.+|+... + ..++.+.+.. .....-.|
T Consensus 112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~-f-~~~~~~~~~~---------------~~~~Kp~~ 174 (250)
T 3l5k_A 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSL-F-SHIVLGDDPE---------------VQHGKPDP 174 (250)
T ss_dssp CBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTT-S-SCEECTTCTT---------------CCSCTTST
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhh-e-eeEEecchhh---------------ccCCCCCh
Confidence 47899999999999999999999999866554432 22333210 0 0011110000 00011112
Q ss_pred hhHHHHHHHHhhcC--CEEEEEcCCCCchhHHhhcC---eeEEecCchHHHHhhcchhccCCChhHHH
Q 013242 245 EHKYEIVKHLQARN--HICGMIGNGVNDAPALKKAD---IGIAVADATDAARSAADIVLTEPGLNVII 307 (447)
Q Consensus 245 ~~K~~iV~~lq~~g--~~v~~iGDg~ND~~al~~A~---vGIa~~~a~~~a~~aAD~vl~~~~~~~i~ 307 (447)
+--..+++.++... ..|++|||+.||+.|.+.|| ++|+++++.+..+..||+|+.+ +..+.
T Consensus 175 ~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~s--l~el~ 240 (250)
T 3l5k_A 175 DIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNS--LQDFQ 240 (250)
T ss_dssp HHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECSC--GGGCC
T ss_pred HHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeecC--HHHhh
Confidence 22223334444333 77999999999999999999 5666677666778899999854 55543
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.21 E-value=2.3e-06 Score=77.98 Aligned_cols=123 Identities=11% Similarity=0.134 Sum_probs=79.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchh--ccC
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA--GVF 243 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a--~~~ 243 (447)
++.+++.+.++.++. +++++|+........+.+.+|+... .+..++.+. .. ... .-.
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~-~~~~~~~~~------------~~-----~~~~~kpk 145 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPY-FAPHIYSAK------------DL-----GADRVKPK 145 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGG-TTTCEEEHH------------HH-----CTTCCTTS
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHh-ccceEEecc------------cc-----ccCCCCcC
Confidence 356788888887764 9999999999888889999887421 001111000 00 001 111
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee-EEecCchH-------HHHhh-cchhccCCChhHHHHHHH
Q 013242 244 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADATD-------AARSA-ADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 244 p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG-Ia~~~a~~-------~a~~a-AD~vl~~~~~~~i~~~i~ 311 (447)
|+--..+++.++-....|++|||+.||++|++.||++ |++.++.. ..++. ||+++. ++..+...|.
T Consensus 146 ~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~--~~~el~~~l~ 220 (229)
T 2fdr_A 146 PDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVIS--RMQDLPAVIA 220 (229)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEES--CGGGHHHHHH
T ss_pred HHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeec--CHHHHHHHHH
Confidence 2222344555554556799999999999999999998 77765443 36666 999985 4667766553
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=98.18 E-value=1.7e-06 Score=77.81 Aligned_cols=121 Identities=11% Similarity=0.119 Sum_probs=81.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+ ++.|++. +++.++|+.....+..+.+.+|+.... ..++.+... ....-.|+
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~~ 132 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYF--KGIFSAESV-----------------KEYKPSPK 132 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGG-----------------TCCTTCHH
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhC--cEEEehhhc-----------------CCCCCCHH
Confidence 46799999 9999999 999999999998889999999984211 011111000 00111233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEe----cCchHHHHhhcchhccCCChhHHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV----ADATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~----~~a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
--..+++.++ ...++||||+.||+.|.+.||++.++ +++.+.....+|+++. ++..+...+.
T Consensus 133 ~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l~ 198 (201)
T 2w43_A 133 VYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVN--DFKELYEWIL 198 (201)
T ss_dssp HHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEES--SHHHHHHHHH
T ss_pred HHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEEC--CHHHHHHHHH
Confidence 3344555555 56799999999999999999999776 2333333446888874 4777766553
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=98.15 E-value=2.6e-06 Score=76.23 Aligned_cols=93 Identities=10% Similarity=0.031 Sum_probs=66.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCc-HHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccCh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQ-LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 244 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~-~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p 244 (447)
++.|++.++|+.|++.|++++++||.. ...+..+.+.+|+.... ... .++..-.|
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f-~~~-----------------------~~~~~~k~ 123 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYF-VHR-----------------------EIYPGSKI 123 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTE-EEE-----------------------EESSSCHH
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhc-cee-----------------------EEEeCchH
Confidence 578999999999999999999999999 78999999999985210 000 00111011
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEE
Q 013242 245 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 282 (447)
Q Consensus 245 ~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa 282 (447)
+.-..+.+.+.-....+++|||+.+|+.+.+.||+...
T Consensus 124 ~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i 161 (187)
T 2wm8_A 124 THFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCI 161 (187)
T ss_dssp HHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEE
Confidence 11223334444444569999999999999999998643
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.14 E-value=1.6e-06 Score=81.77 Aligned_cols=125 Identities=14% Similarity=0.196 Sum_probs=85.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++++.|++.|+++.++|+.... ...+.+.+|+.... ..++.+ ++ .....-.|+
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f--~~~~~~------------~~-----~~~~Kp~~~ 165 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHF--DFVLTS------------EA-----AGWPKPDPR 165 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGC--SCEEEH------------HH-----HSSCTTSHH
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhh--hEEEee------------cc-----cCCCCCCHH
Confidence 36799999999999999999999987664 57888888874210 000000 00 001222333
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCC-CchhHHhhcCeeEEecCchHH------HHhhcchhccCCChhHHHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIGIAVADATDA------ARSAADIVLTEPGLNVIITAVLI 312 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~-ND~~al~~A~vGIa~~~a~~~------a~~aAD~vl~~~~~~~i~~~i~~ 312 (447)
--..+++.+.-....|+||||+. ||+.|.+.||+++++.+.... ....+|+++. ++..+..++..
T Consensus 166 ~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~--~l~el~~~l~~ 237 (263)
T 3k1z_A 166 IFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILP--SLAHLLPALDC 237 (263)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEES--SGGGHHHHHHH
T ss_pred HHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeC--CHHHHHHHHHH
Confidence 34455666665567799999997 999999999999998643221 2236899984 58888777654
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.13 E-value=1.8e-06 Score=78.53 Aligned_cols=115 Identities=11% Similarity=0.113 Sum_probs=78.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+.++.|++ |+++.++|+.....+..+.+.+|+..-. ..++. +.-.+.
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f--~~i~~-----------------------~~~~~K 137 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFF--DGIYG-----------------------SSPEAP 137 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEE-----------------------ECSSCC
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhe--eeeec-----------------------CCCCCC
Confidence 467999999999999 9999999999988888888999984210 00110 111112
Q ss_pred hHHHHH----HHHhhcCCEEEEEcCCCCchhHHhhcCe---eEEecCc-hHHHH-hhcchhccCCChhHHHH
Q 013242 246 HKYEIV----KHLQARNHICGMIGNGVNDAPALKKADI---GIAVADA-TDAAR-SAADIVLTEPGLNVIIT 308 (447)
Q Consensus 246 ~K~~iV----~~lq~~g~~v~~iGDg~ND~~al~~A~v---GIa~~~a-~~~a~-~aAD~vl~~~~~~~i~~ 308 (447)
.|.++. +.++-....|++|||+.||+.|.+.||+ +|+++++ .+..+ ..+|+++.+ +..+..
T Consensus 138 p~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~--~~el~~ 207 (210)
T 2ah5_A 138 HKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHK--PLEVLA 207 (210)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESS--TTHHHH
T ss_pred CChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECC--HHHHHH
Confidence 233333 3333334569999999999999999999 6666654 33444 358988854 555543
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=98.09 E-value=4e-06 Score=75.20 Aligned_cols=137 Identities=15% Similarity=0.108 Sum_probs=90.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcH---HHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhc
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQL---AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 241 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~---~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~ 241 (447)
-++.|++.++++.|++.|+++.++|+... ..+..+.+.+|+..-. ..++...+... ......
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~f--d~i~~~~~~~~-------------~~~~~K 97 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYF--DFIYASNSELQ-------------PGKMEK 97 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGE--EEEEECCTTSS-------------TTCCCT
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhhe--EEEEEcccccc-------------ccCCCC
Confidence 35889999999999999999999998876 8888999999985210 01111100000 000112
Q ss_pred cChhhHHHHHHHHhhcCCEEEEEcCC-CCchhHHhhcCeeEEe-cCchH-----HHH-hhcchhccCCChhHHHHHHHHH
Q 013242 242 VFPEHKYEIVKHLQARNHICGMIGNG-VNDAPALKKADIGIAV-ADATD-----AAR-SAADIVLTEPGLNVIITAVLIS 313 (447)
Q Consensus 242 ~~p~~K~~iV~~lq~~g~~v~~iGDg-~ND~~al~~A~vGIa~-~~a~~-----~a~-~aAD~vl~~~~~~~i~~~i~~~ 313 (447)
-.|+--..+++.+......++||||+ .+|+.+-+.||+.... ..+.. ... ..+|+++...++..+..++...
T Consensus 98 P~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l~ 177 (189)
T 3ib6_A 98 PDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLLL 177 (189)
T ss_dssp TSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHHH
T ss_pred cCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHHHH
Confidence 23333445566666556679999999 7999999999997443 33221 111 2678888655799999888876
Q ss_pred HHH
Q 013242 314 RAI 316 (447)
Q Consensus 314 r~~ 316 (447)
+.-
T Consensus 178 ~~~ 180 (189)
T 3ib6_A 178 KKI 180 (189)
T ss_dssp HHH
T ss_pred HHh
Confidence 553
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.06 E-value=1.2e-05 Score=74.65 Aligned_cols=119 Identities=16% Similarity=0.114 Sum_probs=80.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+.++.|+ .|+++.++|+..........+.+|+.... . .++. ...-.|+
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f-~-~i~~----------------------~~kp~~~ 166 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLF-P-RIEV----------------------VSEKDPQ 166 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTC-C-CEEE----------------------ESCCSHH
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhC-c-eeee----------------------eCCCCHH
Confidence 46799999999999 99999999999988888888888874211 0 0000 0011133
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCC-CchhHHhhcCeeEEec-CchH--------HHHhhcch-hccCCChhHHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIGIAVA-DATD--------AARSAADI-VLTEPGLNVIITAVL 311 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~-ND~~al~~A~vGIa~~-~a~~--------~a~~aAD~-vl~~~~~~~i~~~i~ 311 (447)
--..+++.++-....|++|||+. ||+.|.+.||+++++- .+.. .....+|+ ++ +++..+..++.
T Consensus 167 ~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~~l~ 241 (251)
T 2pke_A 167 TYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREV--PDPSGWPAAVR 241 (251)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEEC--SSGGGHHHHHH
T ss_pred HHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeee--CCHHHHHHHHH
Confidence 23445555555556799999999 9999999999997763 2211 11235776 66 44777776664
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=98.00 E-value=4.2e-06 Score=79.28 Aligned_cols=64 Identities=27% Similarity=0.386 Sum_probs=51.3
Q ss_pred hccChh--hHHHHHHHH-hhcCCEEEEEcC----CCCchhHHhhcC-eeEEecCchHHHHhhcchhccCCCh
Q 013242 240 AGVFPE--HKYEIVKHL-QARNHICGMIGN----GVNDAPALKKAD-IGIAVADATDAARSAADIVLTEPGL 303 (447)
Q Consensus 240 a~~~p~--~K~~iV~~l-q~~g~~v~~iGD----g~ND~~al~~A~-vGIa~~~a~~~a~~aAD~vl~~~~~ 303 (447)
.++.|. +|...++.| .-....|++||| +.||++||+.|+ +|++|+|+.+.++..||+|+.+++-
T Consensus 189 leI~~~~vsKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~~~~k~~a~~v~~~~~~ 260 (262)
T 2fue_A 189 FDVFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFFPETAH 260 (262)
T ss_dssp EEEEETTCSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHCTTC--
T ss_pred EEEecCCCCHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCCHHHHHhhheeCCCCcC
Confidence 344443 588888888 112467999999 999999999999 5999999999999999999977653
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.90 E-value=1.5e-05 Score=71.19 Aligned_cols=100 Identities=12% Similarity=0.093 Sum_probs=70.2
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhh
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 246 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~ 246 (447)
+.|++.+.++.|++.| ++.++|+........+.+.+|+.... ..++.+. +. ....-.|+-
T Consensus 87 ~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f--~~~~~~~------------~~-----~~~Kp~~~~ 146 (200)
T 3cnh_A 87 PRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFL--LAFFTSS------------AL-----GVMKPNPAM 146 (200)
T ss_dssp BCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTC--SCEEEHH------------HH-----SCCTTCHHH
T ss_pred cCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhc--ceEEeec------------cc-----CCCCCCHHH
Confidence 6799999999999999 99999999999999999999874211 0011000 00 011112333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCc
Q 013242 247 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADA 286 (447)
Q Consensus 247 K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a 286 (447)
-..+++.++.....|++|||+.||+.|.+.||+...+-+.
T Consensus 147 ~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~ 186 (200)
T 3cnh_A 147 YRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQCVD 186 (200)
T ss_dssp HHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSC
T ss_pred HHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEECC
Confidence 3345555555556799999999999999999999877543
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=97.89 E-value=4.4e-05 Score=69.06 Aligned_cols=123 Identities=17% Similarity=0.129 Sum_probs=80.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhh
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 246 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~ 246 (447)
+.|++.++++.|++.|+++.++|+.....+....+.+|+..-. ..++...+ .....-.|+-
T Consensus 85 ~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~f--d~~~~~~~-----------------~~~~KP~p~~ 145 (216)
T 3kbb_A 85 ENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYF--DVMVFGDQ-----------------VKNGKPDPEI 145 (216)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC--SEEECGGG-----------------SSSCTTSTHH
T ss_pred cCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccc--cccccccc-----------------cCCCcccHHH
Confidence 5789999999999999999999999999999999999985210 00111000 0011222333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeE--Ee--c-CchHHHHhhcchhccCCChhHHHHHH
Q 013242 247 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI--AV--A-DATDAARSAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 247 K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGI--a~--~-~a~~~a~~aAD~vl~~~~~~~i~~~i 310 (447)
=..+++.++-....|+||||+.+|+.+-+.||+.. ++ + +..+...++.+.++.+ .+.+...+
T Consensus 146 ~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~~--~~eli~~l 212 (216)
T 3kbb_A 146 YLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALVK--PEEILNVL 212 (216)
T ss_dssp HHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEEC--GGGHHHHH
T ss_pred HHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEECC--HHHHHHHH
Confidence 34556666666677999999999999999999853 22 3 3344445544444433 34444444
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.87 E-value=3.1e-06 Score=76.32 Aligned_cols=103 Identities=6% Similarity=0.010 Sum_probs=69.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH------hCCCCCCCCcccccCCcchhhhhcCChhHHHhhccch
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR------LGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 239 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~------lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 239 (447)
++.|++.+.++.|++ |++++++|+........+.+. +|+.... ..++.+ ++ ...
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f--~~~~~~------------~~-----~~~ 148 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFF--DKVYAS------------CQ-----MGK 148 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGS--SEEEEH------------HH-----HTC
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHc--CeEEee------------cc-----cCC
Confidence 467999999999999 999999999988877777666 4552100 000000 00 001
Q ss_pred hccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchH
Q 013242 240 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATD 288 (447)
Q Consensus 240 a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~ 288 (447)
..-.|+--..+++.+.-....|++|||+.||+.|.+.||++.++.++.+
T Consensus 149 ~Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~~ 197 (211)
T 2i6x_A 149 YKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDNGE 197 (211)
T ss_dssp CTTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTC
T ss_pred CCCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECCHH
Confidence 1112223344555555556679999999999999999999999876543
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=97.86 E-value=3.9e-06 Score=78.56 Aligned_cols=53 Identities=19% Similarity=0.266 Sum_probs=43.5
Q ss_pred hHHHHHHHH-hhcCCEEEEEcC----CCCchhHHhhcCe-eEEecCchHHHHhhcchhc
Q 013242 246 HKYEIVKHL-QARNHICGMIGN----GVNDAPALKKADI-GIAVADATDAARSAADIVL 298 (447)
Q Consensus 246 ~K~~iV~~l-q~~g~~v~~iGD----g~ND~~al~~A~v-GIa~~~a~~~a~~aAD~vl 298 (447)
+|...++.| .-....|+++|| |.||.+||+.|+. |++|+|+.+.+|+.||+|.
T Consensus 188 ~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~vk~~A~~v~ 246 (246)
T 2amy_A 188 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICELLFS 246 (246)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHHHHHHHCC
T ss_pred chHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHHHHHHHhhcC
Confidence 577777776 223567999999 9999999999998 9999999999999999973
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=97.82 E-value=9.4e-06 Score=74.45 Aligned_cols=136 Identities=15% Similarity=-0.003 Sum_probs=79.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcH---------------HHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCCh
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQL---------------AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPV 229 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~---------------~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~ 229 (447)
.++.|++.++|+.|++.|+++.++|+... ..+..+.+.+|+.- ..........+..+.
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~---~~~~~~~~~~~g~~~---- 127 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFV---DMVLACAYHEAGVGP---- 127 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCC---SEEEEECCCTTCCST----
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCce---eeEEEeecCCCCcee----
Confidence 46789999999999999999999999987 67788888998731 110000000000000
Q ss_pred hHHHhhccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeE--Eec--Cch-HHHHhhcchhccCCChh
Q 013242 230 DELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI--AVA--DAT-DAARSAADIVLTEPGLN 304 (447)
Q Consensus 230 ~~~~~~~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGI--a~~--~a~-~~a~~aAD~vl~~~~~~ 304 (447)
+. .....+..-.|.-=..+.+.+.-....++||||+.||+.|.+.||+.. .+. ... +.....+|+++. ++.
T Consensus 128 -~~-~~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~--~l~ 203 (218)
T 2o2x_A 128 -LA-IPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSS--ELG 203 (218)
T ss_dssp -TC-CSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHH--HHH
T ss_pred -ec-ccCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEecc--cHH
Confidence 00 000001111122222344445444567999999999999999999764 332 221 112235677763 366
Q ss_pred HHHHHHH
Q 013242 305 VIITAVL 311 (447)
Q Consensus 305 ~i~~~i~ 311 (447)
.+..++.
T Consensus 204 el~~~l~ 210 (218)
T 2o2x_A 204 DLLAAIE 210 (218)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6655543
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.81 E-value=1.6e-05 Score=74.95 Aligned_cols=43 Identities=21% Similarity=0.334 Sum_probs=36.7
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcC---CcHHHHHHHHHHhCCC
Q 013242 164 FDPPIHDSAETIRRALSLGLGVKMITG---DQLAIAKETGRRLGMG 206 (447)
Q Consensus 164 ~d~~r~~~~~~I~~l~~~Gi~v~miTG---d~~~~a~~ia~~lGi~ 206 (447)
.+.+-|+++++|++|+++|++++++|| +.........+.+|+.
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~ 67 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLE 67 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCC
Confidence 455668899999999999999999999 6777777777888885
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.79 E-value=1.5e-05 Score=75.06 Aligned_cols=43 Identities=12% Similarity=0.137 Sum_probs=36.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcC---CcHHHHHHHHHHhCCCC
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITG---DQLAIAKETGRRLGMGT 207 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTG---d~~~~a~~ia~~lGi~~ 207 (447)
+.+-++++++|++|+++|++++++|| +.........+.+|+..
T Consensus 21 ~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~ 66 (266)
T 3pdw_A 21 TEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPA 66 (266)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCC
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 34557899999999999999999988 77777778888888853
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=97.74 E-value=6.1e-05 Score=70.93 Aligned_cols=123 Identities=10% Similarity=0.117 Sum_probs=81.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++++.|++ |+++.++|+.....+..+.+.+|+..-. ..++.+.+. ....-.|+
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f--~~i~~~~~~-----------------~~~KP~p~ 180 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYF--DAIVIGGEQ-----------------KEEKPAPS 180 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGC--SEEEEGGGS-----------------SSCTTCHH
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhh--heEEecCCC-----------------CCCCCCHH
Confidence 477999999999998 6999999999999899999999985210 111111000 01111233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCC-CCchhHHhhcCe--eEEecCchH---HHHhhcchhccCCChhHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNG-VNDAPALKKADI--GIAVADATD---AARSAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg-~ND~~al~~A~v--GIa~~~a~~---~a~~aAD~vl~~~~~~~i~~~i 310 (447)
--..+++.+.-....++||||+ .||+.+-+.||+ .|.+..+.. .....+|+++. ++..+..++
T Consensus 181 ~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~--~~~el~~~l 249 (260)
T 2gfh_A 181 IFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVS--SVLELPALL 249 (260)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEES--SGGGHHHHH
T ss_pred HHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEEC--CHHHHHHHH
Confidence 3344555555555679999995 999999999999 577753321 12345788774 477776655
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.68 E-value=2.4e-05 Score=65.26 Aligned_cols=98 Identities=11% Similarity=0.081 Sum_probs=66.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+. + .....-.|+
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~~~~------------~-----~~~~Kp~~~ 78 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVV--DKVLLSG------------E-----LGVEKPEEA 78 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSS--SEEEEHH------------H-----HSCCTTSHH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhc--cEEEEec------------c-----CCCCCCCHH
Confidence 36688999999999999999999999988888888888874211 0011000 0 001112233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEE
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 282 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa 282 (447)
--..+++.+......++||||+.+|+.+.+.+|+...
T Consensus 79 ~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~i 115 (137)
T 2pr7_A 79 AFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGV 115 (137)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEEE
Confidence 3334445555445579999999999999999998533
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00014 Score=65.65 Aligned_cols=95 Identities=11% Similarity=0.026 Sum_probs=61.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++|+.|++.|+++.++||.....+..+.. ..+ ..++.+.+.. ...-.|+
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~-~~~------d~v~~~~~~~-----------------~~KP~p~ 91 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA-PVN------DWMIAAPRPT-----------------AGWPQPD 91 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT-TTT------TTCEECCCCS-----------------SCTTSTH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC-ccC------CEEEECCcCC-----------------CCCCChH
Confidence 567999999999999999999999998877754443 111 1111111100 1111233
Q ss_pred hHHHHHHHHhhc-CCEEEEEcCCCCchhHHhhcCee-EEec
Q 013242 246 HKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIG-IAVA 284 (447)
Q Consensus 246 ~K~~iV~~lq~~-g~~v~~iGDg~ND~~al~~A~vG-Ia~~ 284 (447)
--..+++.+... ...++||||..+|+.+-+.||+- |++.
T Consensus 92 ~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~ 132 (196)
T 2oda_A 92 ACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLA 132 (196)
T ss_dssp HHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEES
T ss_pred HHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEc
Confidence 223344455443 25699999999999999999973 5554
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=97.62 E-value=3.9e-06 Score=75.29 Aligned_cols=106 Identities=4% Similarity=-0.041 Sum_probs=65.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH-hCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccCh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR-LGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 244 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~-lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p 244 (447)
++.|++.+.++.|++.|++++++|+........+... +|+... + ..++.+ ++ .....-.|
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~-f-~~~~~~------------~~-----~~~~Kp~~ 151 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDA-A-DHIYLS------------QD-----LGMRKPEA 151 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHH-C-SEEEEH------------HH-----HTCCTTCH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhh-e-eeEEEe------------cc-----cCCCCCCH
Confidence 4679999999999999999999998765433222222 222100 0 000000 00 00111123
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHH
Q 013242 245 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAA 290 (447)
Q Consensus 245 ~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a 290 (447)
+--..+++.+.-....+++|||+.||+.|.+.||+...+.+..+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~~ 197 (206)
T 2b0c_A 152 RIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKTTI 197 (206)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTTHH
T ss_pred HHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEecCCchH
Confidence 3334555666655667999999999999999999998876554443
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.60 E-value=4.5e-05 Score=69.36 Aligned_cols=118 Identities=17% Similarity=0.209 Sum_probs=74.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++++.|++. +++.++|+.... .+.+|+... + ..++.. ++ .....-.|+
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~-f-~~~~~~------------~~-----~~~~kp~~~ 159 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADY-F-AFALCA------------ED-----LGIGKPDPA 159 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGG-C-SEEEEH------------HH-----HTCCTTSHH
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHH-e-eeeEEc------------cc-----cCCCCcCHH
Confidence 4678999999999998 999999987654 234444210 0 000000 00 001111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCC-CchhHHhhcCeeEEec----CchHHHHhhcchhccCCChhHHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIGIAVA----DATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~-ND~~al~~A~vGIa~~----~a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
--..+.+.++-....|++|||+. ||+.|.+.||++.++- +..+. ...+|+++. ++..+..++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~~--~l~el~~~l~ 227 (230)
T 3vay_A 160 PFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEIH--NLSQLPEVLA 227 (230)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEES--SGGGHHHHHH
T ss_pred HHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeEC--CHHHHHHHHH
Confidence 33445555555556799999998 9999999999998772 22222 567898884 4888777664
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00015 Score=72.52 Aligned_cols=137 Identities=13% Similarity=0.122 Sum_probs=81.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC-cccccCCcchhhhhcCChhHHHhhccchhccCh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP-SSALSGQDRDESIVALPVDELIEKADGFAGVFP 244 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p 244 (447)
++.|++.++++.|+++|+++.++|+.....+..+.+.+|+..- +. ..++.+.+....- +..........-.|
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~-Fd~~~Ivs~ddv~~~~------~~~~~~kp~~KP~P 287 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPY-FEADFIATASDVLEAE------NMYPQARPLGKPNP 287 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGG-SCGGGEECHHHHHHHH------HHSTTSCCCCTTST
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHh-cCCCEEEecccccccc------cccccccCCCCCCH
Confidence 5789999999999999999999999999999999999998531 11 0122211110000 00000000011111
Q ss_pred hhHHHHHHHHh--------------hcCCEEEEEcCCCCchhHHhhcCee-EEecCc------hHHH-HhhcchhccCCC
Q 013242 245 EHKYEIVKHLQ--------------ARNHICGMIGNGVNDAPALKKADIG-IAVADA------TDAA-RSAADIVLTEPG 302 (447)
Q Consensus 245 ~~K~~iV~~lq--------------~~g~~v~~iGDg~ND~~al~~A~vG-Ia~~~a------~~~a-~~aAD~vl~~~~ 302 (447)
+-=..+.+.+. .....|+||||+.+|+.+-+.||+. |++..+ .+.. ...||+++. +
T Consensus 288 ~~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi~--s 365 (384)
T 1qyi_A 288 FSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVIN--H 365 (384)
T ss_dssp HHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEES--S
T ss_pred HHHHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEEC--C
Confidence 11112222222 1245799999999999999999986 444432 1222 346888884 4
Q ss_pred hhHHHHHHH
Q 013242 303 LNVIITAVL 311 (447)
Q Consensus 303 ~~~i~~~i~ 311 (447)
+..+...+.
T Consensus 366 l~eL~~~l~ 374 (384)
T 1qyi_A 366 LGELRGVLD 374 (384)
T ss_dssp GGGHHHHHS
T ss_pred HHHHHHHHH
Confidence 777766553
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=97.52 E-value=4.8e-05 Score=69.63 Aligned_cols=105 Identities=9% Similarity=-0.034 Sum_probs=69.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH------hCCCCCCCCcccccCCcchhhhhcCChhHHHhhccch
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR------LGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 239 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~------lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 239 (447)
++.|++.++++.|++. +++.++|+........+.+. +|+... + ..++.. ++ ...
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~-f-d~i~~~------------~~-----~~~ 171 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDY-F-EKTYLS------------YE-----MKM 171 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHH-C-SEEEEH------------HH-----HTC
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHh-C-CEEEee------------cc-----cCC
Confidence 4679999999999999 99999999998888766643 343100 0 000000 00 001
Q ss_pred hccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHH
Q 013242 240 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAA 290 (447)
Q Consensus 240 a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a 290 (447)
..-.|+--..+++.++-....|++|||+.||+.|.+.||++.++.+..+..
T Consensus 172 ~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~~ 222 (229)
T 4dcc_A 172 AKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAGEDW 222 (229)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCCG
T ss_pred CCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCHHHH
Confidence 122233334556666655677999999999999999999998887654433
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00024 Score=66.21 Aligned_cols=116 Identities=14% Similarity=0.148 Sum_probs=77.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+.++.|++.|+++.+.|+.. .+..+.+.+|+..-. ..++.+.+. ....-.|+
T Consensus 116 ~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~F--d~i~~~~~~-----------------~~~KP~p~ 174 (250)
T 4gib_A 116 DILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKF--DFIADAGKC-----------------KNNKPHPE 174 (250)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGC--SEECCGGGC-----------------CSCTTSSH
T ss_pred ccchhHHHHHHHHHhcccccccccccc--hhhhHhhhccccccc--ceeeccccc-----------------CCCCCcHH
Confidence 467999999999999999999887664 355678889985210 111111000 01222334
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCe-eEEecCchHHHHhhcchhccCCChhHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVADATDAARSAADIVLTEPGLNVI 306 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~v-GIa~~~a~~~a~~aAD~vl~~~~~~~i 306 (447)
-=..+++.+.-....|+||||+.+|+.+-+.||+ .|++++..+. ..||+++.+ +..+
T Consensus 175 ~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~--~~ad~vi~~--l~eL 232 (250)
T 4gib_A 175 IFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVGNYENL--KKANLVVDS--TNQL 232 (250)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESCTTTT--TTSSEEESS--GGGC
T ss_pred HHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEECChhHh--ccCCEEECC--hHhC
Confidence 4445666666666779999999999999999998 5677654332 358999854 5554
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=97.34 E-value=6.1e-05 Score=66.76 Aligned_cols=104 Identities=13% Similarity=0.091 Sum_probs=63.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC---------------cHHHHHHHHHHhCCCCCCCCcccccCCcc-hhhhhcCCh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGD---------------QLAIAKETGRRLGMGTNMYPSSALSGQDR-DESIVALPV 229 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd---------------~~~~a~~ia~~lGi~~~~~~~~~~~~~~~-~~~~~~~~~ 229 (447)
++.|++.++|+.|++.|+++.++|+. ....+..+.+.+|+. +...+..+... ++.....+.
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---fd~v~~s~~~~~~~~~~~KP~ 118 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ---FDEVLICPHLPADECDCRKPK 118 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC---EEEEEEECCCGGGCCSSSTTS
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC---eeEEEEcCCCCcccccccCCC
Confidence 57899999999999999999999998 566778888889884 11111110000 000000010
Q ss_pred hHHHhhccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee-EEecCc
Q 013242 230 DELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADA 286 (447)
Q Consensus 230 ~~~~~~~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG-Ia~~~a 286 (447)
.++ | ..+++.+.-....++||||+.+|+.+-+.||+. |.+..+
T Consensus 119 p~~------~--------~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~ 162 (176)
T 2fpr_A 119 VKL------V--------ERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRE 162 (176)
T ss_dssp CGG------G--------GGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred HHH------H--------HHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCC
Confidence 111 1 111223333345689999999999999999996 445433
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00048 Score=64.64 Aligned_cols=42 Identities=14% Similarity=0.035 Sum_probs=37.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEc---CCcHHHHHHHHHHhCCC
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMIT---GDQLAIAKETGRRLGMG 206 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miT---Gd~~~~a~~ia~~lGi~ 206 (447)
.++-+++.++|++|++.|++++++| |+.........+.+|+.
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 5677899999999999999999999 88888888888888885
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00018 Score=67.97 Aligned_cols=85 Identities=15% Similarity=0.072 Sum_probs=63.1
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcH----HHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccch
Q 013242 164 FDPPIHDSAETIRRALSLGLGVKMITGDQL----AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 239 (447)
Q Consensus 164 ~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~----~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 239 (447)
..++.|++.+.|+.|++.|+++.++||+.. ..+..-.+.+||..-.... ++
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~-------------------------Li 153 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKT-------------------------LL 153 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTTT-------------------------EE
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccce-------------------------eE
Confidence 356889999999999999999999999975 4777888899996310000 11
Q ss_pred hccChhhHHHHHHHHhhc-CCEEEEEcCCCCchhH
Q 013242 240 AGVFPEHKYEIVKHLQAR-NHICGMIGNGVNDAPA 273 (447)
Q Consensus 240 a~~~p~~K~~iV~~lq~~-g~~v~~iGDg~ND~~a 273 (447)
.+-....|....+.+.+. ...|+++||..+|.++
T Consensus 154 lr~~~~~K~~~r~~L~~~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 154 LKKDKSNKSVRFKQVEDMGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp EESSCSSSHHHHHHHHTTTCEEEEEEESSGGGGCG
T ss_pred ecCCCCChHHHHHHHHhcCCCEEEEECCChHHcCc
Confidence 111235677777888774 4568999999999985
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.001 Score=61.78 Aligned_cols=40 Identities=28% Similarity=0.260 Sum_probs=35.9
Q ss_pred CCcchHHHHHHHHhCCCeEEEEc---CCcHHHHHHHHHHhCCC
Q 013242 167 PIHDSAETIRRALSLGLGVKMIT---GDQLAIAKETGRRLGMG 206 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miT---Gd~~~~a~~ia~~lGi~ 206 (447)
+.+.+.++++.+++.|+++.++| |+.........+.+|+.
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 66889999999999999999999 99998888888888875
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00011 Score=69.03 Aligned_cols=60 Identities=22% Similarity=0.267 Sum_probs=49.1
Q ss_pred hhccChh--hHHHHHHHHhhcCCEEEEEcC----CCCchhHHhhcC-eeEEecCchHHHHhhcchhc
Q 013242 239 FAGVFPE--HKYEIVKHLQARNHICGMIGN----GVNDAPALKKAD-IGIAVADATDAARSAADIVL 298 (447)
Q Consensus 239 ~a~~~p~--~K~~iV~~lq~~g~~v~~iGD----g~ND~~al~~A~-vGIa~~~a~~~a~~aAD~vl 298 (447)
+.++.|. +|...++.|.+....|+++|| |.||.+||+.|+ +|++|+|+.+.++..+++..
T Consensus 178 ~leI~~~gv~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~~~~~~~~~~~~ 244 (246)
T 3f9r_A 178 SFDVFPVGWDKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKDTIAEVEKIIA 244 (246)
T ss_dssp EEEEEETTCSGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHHHHHHHHHHHhc
Confidence 3444443 688888888776678999999 699999999996 89999999999988777653
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00054 Score=62.22 Aligned_cols=118 Identities=8% Similarity=-0.016 Sum_probs=69.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++++.|++.|+++.++|+... .+..+.+.+|+..-. ..++.+.+. ....-.|+
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f--~~~~~~~~~-----------------~~~Kp~~~ 154 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYF--DALALSYEI-----------------KAVKPNPK 154 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGC--SEEC----------------------------CC
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHe--eEEEecccc-----------------CCCCCCHH
Confidence 4679999999999999999999999876 477888889984210 011110000 00111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCC-chhHHhhcCeeEEe-cCchHHHHhhcchhccCCChhHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVN-DAPALKKADIGIAV-ADATDAARSAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~N-D~~al~~A~vGIa~-~~a~~~a~~aAD~vl~~~~~~~i~~~i 310 (447)
--..+++.+... . +||||+.+ |+.+.+.||+.... ...... ... +.++ +++..+...+
T Consensus 155 ~~~~~~~~~~~~--~-~~vgD~~~~Di~~a~~aG~~~i~v~~~~~~-~~~-~~~i--~~l~el~~~l 214 (220)
T 2zg6_A 155 IFGFALAKVGYP--A-VHVGDIYELDYIGAKRSYVDPILLDRYDFY-PDV-RDRV--KNLREALQKI 214 (220)
T ss_dssp HHHHHHHHHCSS--E-EEEESSCCCCCCCSSSCSEEEEEBCTTSCC-TTC-CSCB--SSHHHHHHHH
T ss_pred HHHHHHHHcCCC--e-EEEcCCchHhHHHHHHCCCeEEEECCCCCC-CCc-ceEE--CCHHHHHHHH
Confidence 223344444433 2 99999999 99999999998554 322110 011 3444 4466665554
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0004 Score=63.65 Aligned_cols=113 Identities=10% Similarity=0.103 Sum_probs=72.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++++.|++.| ++.++|+.....+..+.+.+|+..-. ... +.. ..
T Consensus 96 ~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~f-~~~------------------------~~~---~~ 146 (231)
T 2p11_A 96 RVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDEV-EGR------------------------VLI---YI 146 (231)
T ss_dssp GBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHHT-TTC------------------------EEE---ES
T ss_pred CcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHhc-Cee------------------------EEe---cC
Confidence 57899999999999999 99999999998899999998874100 000 000 11
Q ss_pred hHHHHHHHH--hhcCCEEEEEcCCCC---chhHHhhcCee-EEecC-----chHHHHhh--cchhccCCChhHHHHH
Q 013242 246 HKYEIVKHL--QARNHICGMIGNGVN---DAPALKKADIG-IAVAD-----ATDAARSA--ADIVLTEPGLNVIITA 309 (447)
Q Consensus 246 ~K~~iV~~l--q~~g~~v~~iGDg~N---D~~al~~A~vG-Ia~~~-----a~~~a~~a--AD~vl~~~~~~~i~~~ 309 (447)
.|..+++.+ .-....|+||||+.| |+.+-+.||+. |.+.. ..+..+.. +|+++.+ +..+...
T Consensus 147 ~K~~~~~~~~~~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~~--~~el~~~ 221 (231)
T 2p11_A 147 HKELMLDQVMECYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVER--IGDLVEM 221 (231)
T ss_dssp SGGGCHHHHHHHSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEESS--GGGGGGC
T ss_pred ChHHHHHHHHhcCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeecC--HHHHHHH
Confidence 122222222 224568999999999 66666778865 33332 22233333 7888743 6555443
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00022 Score=67.43 Aligned_cols=85 Identities=13% Similarity=0.044 Sum_probs=62.1
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcH----HHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccch
Q 013242 164 FDPPIHDSAETIRRALSLGLGVKMITGDQL----AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 239 (447)
Q Consensus 164 ~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~----~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 239 (447)
..++.|++.+.|+.|++.|+++.++||+.. ..+..-.+.+||..-... . ++
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~-~------------------------Li 153 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEES-A------------------------FY 153 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGG-G------------------------EE
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCccccc-c------------------------ee
Confidence 356889999999999999999999999965 577778888999621000 0 11
Q ss_pred hccChhhHHHHHHHHhhc-CCEEEEEcCCCCchhH
Q 013242 240 AGVFPEHKYEIVKHLQAR-NHICGMIGNGVNDAPA 273 (447)
Q Consensus 240 a~~~p~~K~~iV~~lq~~-g~~v~~iGDg~ND~~a 273 (447)
.+-....|....+.+.+. ...|++|||..+|.++
T Consensus 154 lr~~~~~K~~~r~~l~~~Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 154 LKKDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp EESSCSCCHHHHHHHHHTTEEEEEEEESSGGGGCS
T ss_pred ccCCCCChHHHHHHHHhcCCCEEEEECCChHHhcc
Confidence 111124567777777777 4468999999999974
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00083 Score=61.27 Aligned_cols=39 Identities=15% Similarity=0.174 Sum_probs=31.6
Q ss_pred CcchHHHHHHHHhCCCeEEEEc---CCcHHHHHHHHHHhCCC
Q 013242 168 IHDSAETIRRALSLGLGVKMIT---GDQLAIAKETGRRLGMG 206 (447)
Q Consensus 168 r~~~~~~I~~l~~~Gi~v~miT---Gd~~~~a~~ia~~lGi~ 206 (447)
-+.+.++++.+++.|+++.++| |+...........+|+.
T Consensus 21 ~~~~~~~~~~l~~~g~~~~~~t~~~g~~~~~~~~~~~~~g~~ 62 (250)
T 2c4n_A 21 VPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp CTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred CcCHHHHHHHHHHcCCcEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 3445889999999999999999 88887777777777774
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=97.00 E-value=0.00039 Score=65.30 Aligned_cols=41 Identities=17% Similarity=0.131 Sum_probs=36.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEc---CCcHHHHHHHHHHhCCCC
Q 013242 166 PPIHDSAETIRRALSLGLGVKMIT---GDQLAIAKETGRRLGMGT 207 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miT---Gd~~~~a~~ia~~lGi~~ 207 (447)
++ |+++++|++++++|++++++| |+.........+.+|+..
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~ 65 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVET 65 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCC
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 35 899999999999999999999 888888888888899853
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=96.95 E-value=0.00038 Score=66.81 Aligned_cols=96 Identities=11% Similarity=-0.009 Sum_probs=66.5
Q ss_pred CCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHH---HHHHHH--------hCCCCCCCCcccccCCcchhhhhcCChhH
Q 013242 163 LFDPPIHDSAETIRRALSLGLGVKMITGDQLAIA---KETGRR--------LGMGTNMYPSSALSGQDRDESIVALPVDE 231 (447)
Q Consensus 163 l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a---~~ia~~--------lGi~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (447)
.++++.|++.++++.|++.|+++.++||.....+ ....+. +|+. + ..++.+...
T Consensus 185 ~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~---~-~~~~~~~~~----------- 249 (301)
T 1ltq_A 185 DTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVP---L-VMQCQREQG----------- 249 (301)
T ss_dssp GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCC---C-SEEEECCTT-----------
T ss_pred cccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCC---c-hheeeccCC-----------
Confidence 3567899999999999999999999999985432 344445 6772 1 111111110
Q ss_pred HHhhccchhccChhhHHHHHHHHhhcC-CEEEEEcCCCCchhHHhhcCee
Q 013242 232 LIEKADGFAGVFPEHKYEIVKHLQARN-HICGMIGNGVNDAPALKKADIG 280 (447)
Q Consensus 232 ~~~~~~v~a~~~p~~K~~iV~~lq~~g-~~v~~iGDg~ND~~al~~A~vG 280 (447)
..+-.|+-|..+++.+.... ..++||||..+|+.|-+.||+-
T Consensus 250 -------~~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~ 292 (301)
T 1ltq_A 250 -------DTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 292 (301)
T ss_dssp -------CCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred -------CCcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCe
Confidence 01223566777777775544 3468999999999999999986
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0015 Score=63.91 Aligned_cols=120 Identities=12% Similarity=0.037 Sum_probs=71.2
Q ss_pred CCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcch--------------hhhhcCC
Q 013242 163 LFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRD--------------ESIVALP 228 (447)
Q Consensus 163 l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~--------------~~~~~~~ 228 (447)
....+.|+.++.|+.|+++|++|+|+||-....+..+|..++..-.+ |...+.|.... +......
T Consensus 140 ~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygI-p~e~ViG~~~~~~~~~~~~~~~~~~~~~dg~y 218 (327)
T 4as2_A 140 EPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNA-KPENVIGVTTLLKNRKTGELTTARKQIAEGKY 218 (327)
T ss_dssp CCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCC-CGGGEEEECEEEECTTTCCEECHHHHHHTTCC
T ss_pred cccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCC-CHHHeEeeeeeeeccccccccccccccccccc
Confidence 33457899999999999999999999999999999999986332111 11112221100 0000000
Q ss_pred hhHHHhhcc-----chhccChhhHHHHHHHHhhcC-CEEEEEcCC-CCchhHHhh--cCeeEEe
Q 013242 229 VDELIEKAD-----GFAGVFPEHKYEIVKHLQARN-HICGMIGNG-VNDAPALKK--ADIGIAV 283 (447)
Q Consensus 229 ~~~~~~~~~-----v~a~~~p~~K~~iV~~lq~~g-~~v~~iGDg-~ND~~al~~--A~vGIa~ 283 (447)
......... ..-.+.-+.|...|+.....| ..++++||+ ..|.+||.. ++.|+++
T Consensus 219 ~~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L 282 (327)
T 4as2_A 219 DPKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHL 282 (327)
T ss_dssp CGGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEE
T ss_pred cccccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEE
Confidence 000000000 001122467888887765443 568999999 479999965 4455554
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0021 Score=60.62 Aligned_cols=42 Identities=17% Similarity=0.249 Sum_probs=35.5
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCc---HHHHHHHHHHhCCC
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQ---LAIAKETGRRLGMG 206 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~---~~~a~~ia~~lGi~ 206 (447)
.++.|++.++|+.|++.|+++.++||+. ...+....+.+|+.
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 4678999999999999999999999998 44555666788985
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=96.43 E-value=0.0037 Score=58.70 Aligned_cols=114 Identities=13% Similarity=0.059 Sum_probs=72.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHh---CCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhcc
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL---GMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 242 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~l---Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~ 242 (447)
++.|++.++++.|+++|+++.++|+.....+..+.+.+ |+..- + ..++.+ .+...-
T Consensus 130 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~-f-d~i~~~-------------------~~~~KP 188 (261)
T 1yns_A 130 EFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILEL-V-DGHFDT-------------------KIGHKV 188 (261)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGG-C-SEEECG-------------------GGCCTT
T ss_pred ccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhh-c-cEEEec-------------------CCCCCC
Confidence 58899999999999999999999999988777776644 34210 0 000000 000111
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee-EEecC---ch-HHHHhhcchhccC
Q 013242 243 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVAD---AT-DAARSAADIVLTE 300 (447)
Q Consensus 243 ~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG-Ia~~~---a~-~~a~~aAD~vl~~ 300 (447)
.|+-=..+++.++-....|+||||..+|+.+-+.||+- |.+.. .. +.....+|.++.+
T Consensus 189 ~p~~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~~ 251 (261)
T 1yns_A 189 ESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITS 251 (261)
T ss_dssp CHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESS
T ss_pred CHHHHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEECC
Confidence 22222445566655566799999999999999999985 44431 11 1222456777643
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=96.31 E-value=0.004 Score=59.73 Aligned_cols=43 Identities=16% Similarity=0.180 Sum_probs=36.0
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEc---CCcHHHHHHHHHHhCCC
Q 013242 164 FDPPIHDSAETIRRALSLGLGVKMIT---GDQLAIAKETGRRLGMG 206 (447)
Q Consensus 164 ~d~~r~~~~~~I~~l~~~Gi~v~miT---Gd~~~~a~~ia~~lGi~ 206 (447)
.+++-+++.++|++|++.|++++++| |+.........+.+|+.
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 35567889999999999999999999 57777777777788875
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.29 E-value=0.0055 Score=56.57 Aligned_cols=100 Identities=9% Similarity=0.013 Sum_probs=66.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.+.++.|++.|+++.++|+... +..+.+.+|+..- -..++.+.+. ....-.|+
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~--fd~i~~~~~~-----------------~~~KP~p~ 153 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREF--FTFCADASQL-----------------KNSKPDPE 153 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGG--CSEECCGGGC-----------------SSCTTSTH
T ss_pred cccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhccc--cccccccccc-----------------cCCCCcHH
Confidence 4679999999999999999999998654 4556778887421 0111111000 01112233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee-EEecCc
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADA 286 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG-Ia~~~a 286 (447)
-=..+++.++-....|+||||+.+|+.+-+.||+- |++..+
T Consensus 154 ~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~~g 195 (243)
T 4g9b_A 154 IFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAG 195 (243)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEESTT
T ss_pred HHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCC
Confidence 33455566666667899999999999999999975 556543
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=96.15 E-value=0.01 Score=54.62 Aligned_cols=47 Identities=15% Similarity=0.220 Sum_probs=33.7
Q ss_pred eccCCCCCCcchHHHHHHHHhCCCeEEEEc---CCcHHHHHHHHHHhCCC
Q 013242 160 LIPLFDPPIHDSAETIRRALSLGLGVKMIT---GDQLAIAKETGRRLGMG 206 (447)
Q Consensus 160 ~i~l~d~~r~~~~~~I~~l~~~Gi~v~miT---Gd~~~~a~~ia~~lGi~ 206 (447)
++.-.+++-+++.++++.+++.|++++++| |..........+.+|+.
T Consensus 17 TLld~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~ 66 (259)
T 2ho4_A 17 TLHIEDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFE 66 (259)
T ss_dssp SSCC---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCC
T ss_pred cEEeCCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCC
Confidence 333345566789999999999999999999 56666666666677775
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=95.43 E-value=0.017 Score=58.94 Aligned_cols=98 Identities=6% Similarity=-0.013 Sum_probs=61.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC------cHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccch
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGD------QLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 239 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd------~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 239 (447)
++.|++.++|+.|++.|+++.++|+. .......... |+... + ..++.+.+. ..
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~--~l~~~-f-d~i~~~~~~-----------------~~ 158 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMC--ELKMH-F-DFLIESCQV-----------------GM 158 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHH--HHHTT-S-SEEEEHHHH-----------------TC
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhh--hhhhh-e-eEEEecccc-----------------CC
Confidence 57899999999999999999999996 2222222211 32110 0 011111000 01
Q ss_pred hccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEec
Q 013242 240 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA 284 (447)
Q Consensus 240 a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~ 284 (447)
..-.|+--..+.+.+.-....|++|||+.||+.+.+.||+....-
T Consensus 159 ~KP~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~ 203 (555)
T 3i28_A 159 VKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILV 203 (555)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEC
T ss_pred CCCCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEE
Confidence 122233334556666656667999999999999999999987664
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=95.37 E-value=0.0058 Score=55.61 Aligned_cols=92 Identities=13% Similarity=0.077 Sum_probs=55.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHH----HHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhcc
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKE----TGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 242 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~----ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~ 242 (447)
+.+++.+.|+.|++.|+++.++|+.....+.. +...++... .+..... .....-
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i~--------~~~~~~~--------------~~~~KP 146 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPA--------TNMNPVI--------------FAGDKP 146 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCT--------TTBCCCE--------------ECCCCT
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCccc--------cccchhh--------------hcCCCC
Confidence 56799999999999999999999987543322 222222210 0000000 000111
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee-EEec
Q 013242 243 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVA 284 (447)
Q Consensus 243 ~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG-Ia~~ 284 (447)
.|+-...+++.+ |- ++||||..+|+.+-+.||+- |.+.
T Consensus 147 ~p~~~~~~~~~~---g~-~l~VGDs~~Di~aA~~aG~~~i~v~ 185 (211)
T 2b82_A 147 GQNTKSQWLQDK---NI-RIFYGDSDNDITAARDVGARGIRIL 185 (211)
T ss_dssp TCCCSHHHHHHT---TE-EEEEESSHHHHHHHHHTTCEEEECC
T ss_pred CHHHHHHHHHHC---CC-EEEEECCHHHHHHHHHCCCeEEEEe
Confidence 233233333333 33 99999999999999999986 4443
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=95.18 E-value=0.00068 Score=60.48 Aligned_cols=80 Identities=15% Similarity=0.199 Sum_probs=56.9
Q ss_pred CCCCcchHHHHHHHHhC-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccC
Q 013242 165 DPPIHDSAETIRRALSL-GLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 243 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~-Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 243 (447)
-++.|++.++++.|++. |+++.++|+.....+..+.+.+|+. +.+ ++
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~glf-----------------------~~i------~~--- 119 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRWV-----------------------EQH------LG--- 119 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHHH-----------------------HHH------HC---
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCch-----------------------hhh------cC---
Confidence 35789999999999999 9999999999877777777666651 110 11
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCCCc----hhHHh-hcCee
Q 013242 244 PEHKYEIVKHLQARNHICGMIGNGVND----APALK-KADIG 280 (447)
Q Consensus 244 p~~K~~iV~~lq~~g~~v~~iGDg~ND----~~al~-~A~vG 280 (447)
+ ++++.+.-....++||||+.+| +.+-+ .||+-
T Consensus 120 ~----~~~~~~~~~~~~~~~vgDs~~dD~~~i~~A~~~aG~~ 157 (193)
T 2i7d_A 120 P----QFVERIILTRDKTVVLGDLLIDDKDTVRGQEETPSWE 157 (193)
T ss_dssp H----HHHTTEEECSCGGGBCCSEEEESSSCCCSSCSSCSSE
T ss_pred H----HHHHHcCCCcccEEEECCchhhCcHHHhhcccccccc
Confidence 1 1334444445678999999999 76666 66654
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=94.87 E-value=0.035 Score=55.94 Aligned_cols=40 Identities=10% Similarity=0.150 Sum_probs=33.9
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCc------------HHHHHHHHHHhCCC
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQ------------LAIAKETGRRLGMG 206 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~------------~~~a~~ia~~lGi~ 206 (447)
+-|++.++|+.|+++|+++.++|+.. ...+..+.+.+|+.
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~ 139 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP 139 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC
Confidence 67999999999999999999999965 22367788889984
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=94.33 E-value=0.029 Score=55.24 Aligned_cols=48 Identities=13% Similarity=0.144 Sum_probs=37.4
Q ss_pred EeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCc----HHHHHHHHHHhCCC
Q 013242 159 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQ----LAIAKETGRRLGMG 206 (447)
Q Consensus 159 G~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~----~~~a~~ia~~lGi~ 206 (447)
|++.-.+.+-|++.++|+.|++.|++++++|+.. ...+..+.+.+|+.
T Consensus 22 Gvl~~g~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~ 73 (352)
T 3kc2_A 22 GVLFRGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVD 73 (352)
T ss_dssp TTTEETTEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSC
T ss_pred CeeEcCCeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCC
Confidence 4444456677999999999999999999999875 34555666678985
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=94.10 E-value=0.052 Score=46.16 Aligned_cols=40 Identities=20% Similarity=0.080 Sum_probs=34.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCc---HHHHHHHHHHhCCC
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQ---LAIAKETGRRLGMG 206 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~---~~~a~~ia~~lGi~ 206 (447)
+.|++.++|++|+++|++++++||++ ...+....++.|+.
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 45789999999999999999999997 56667778888885
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=93.74 E-value=0.063 Score=50.14 Aligned_cols=92 Identities=12% Similarity=0.060 Sum_probs=60.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHh--C---------CCCCCCCcccccCCcchhhhhcCChhHHHh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL--G---------MGTNMYPSSALSGQDRDESIVALPVDELIE 234 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~l--G---------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (447)
++.|++.++++. |+++.++|+.+...+..+.+.+ | +..- . ... ++..+.
T Consensus 125 ~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~-~-~~~--------------f~~~~~ 184 (253)
T 2g80_A 125 PVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSY-I-DGY--------------FDINTS 184 (253)
T ss_dssp CCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGG-C-CEE--------------ECHHHH
T ss_pred CCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhh-c-ceE--------------Eeeecc
Confidence 577899999888 9999999999998888877766 4 2100 0 000 000000
Q ss_pred hccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeE
Q 013242 235 KADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 281 (447)
Q Consensus 235 ~~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGI 281 (447)
-..-.|+-=..+++.+.-....|+||||..+|+.+-+.||+-.
T Consensus 185 ----g~KP~p~~~~~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~ 227 (253)
T 2g80_A 185 ----GKKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIAT 227 (253)
T ss_dssp ----CCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred ----CCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEE
Confidence 0111233334455666655667999999999999999999864
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=93.54 E-value=0.0017 Score=58.07 Aligned_cols=40 Identities=15% Similarity=0.145 Sum_probs=34.3
Q ss_pred CCCcchHHHHHHHHhC-CCeEEEEcCCcHHHHHHHHHHhCC
Q 013242 166 PPIHDSAETIRRALSL-GLGVKMITGDQLAIAKETGRRLGM 205 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~-Gi~v~miTGd~~~~a~~ia~~lGi 205 (447)
++.|++.++++.|++. |+++.++|+.....+..+.+.+|+
T Consensus 75 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l 115 (197)
T 1q92_A 75 EPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAW 115 (197)
T ss_dssp CBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHH
T ss_pred CcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhch
Confidence 5789999999999999 999999999887766666666665
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=92.72 E-value=0.1 Score=48.18 Aligned_cols=52 Identities=17% Similarity=0.233 Sum_probs=34.2
Q ss_pred HHHHHHhhcCCEEEEEcCC-CCchhHHhhcCee-EEe--cCchH-HHHh---hcchhccC
Q 013242 249 EIVKHLQARNHICGMIGNG-VNDAPALKKADIG-IAV--ADATD-AARS---AADIVLTE 300 (447)
Q Consensus 249 ~iV~~lq~~g~~v~~iGDg-~ND~~al~~A~vG-Ia~--~~a~~-~a~~---aAD~vl~~ 300 (447)
.+.+.+.-....++||||+ .||+.+.+.||+. |.+ |.... ..+. .+|+++.+
T Consensus 191 ~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~~ 250 (264)
T 1yv9_A 191 RAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDS 250 (264)
T ss_dssp HHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESS
T ss_pred HHHHHcCCCHHHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEec
Confidence 3445554445679999999 5999999999987 333 33321 2222 57888743
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=92.19 E-value=0.11 Score=45.14 Aligned_cols=25 Identities=8% Similarity=0.151 Sum_probs=23.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGD 191 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd 191 (447)
++.|++.++++.|++ ++++.++|+.
T Consensus 69 ~~~pg~~e~L~~L~~-~~~~~i~T~~ 93 (180)
T 3bwv_A 69 DVMPHAQEVVKQLNE-HYDIYIATAA 93 (180)
T ss_dssp CBCTTHHHHHHHHTT-TSEEEEEECC
T ss_pred CCCcCHHHHHHHHHh-cCCEEEEeCC
Confidence 578999999999998 4999999997
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.78 E-value=0.072 Score=47.76 Aligned_cols=91 Identities=13% Similarity=0.054 Sum_probs=63.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
.+||++.+.++.|++. +++++.|......|..+.+.+++.. .+ ...+.+++. ..
T Consensus 68 ~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~-~f-~~~l~rd~~-----------------------~~ 121 (195)
T 2hhl_A 68 LKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWG-VF-RARLFRESC-----------------------VF 121 (195)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSS-CE-EEEECGGGC-----------------------EE
T ss_pred EeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCcc-cE-EEEEEcccc-----------------------ee
Confidence 5799999999999998 9999999999999999999999853 11 111111110 01
Q ss_pred hHHHHHHHHhh---cCCEEEEEcCCCCchhHHhhcCeeEE
Q 013242 246 HKYEIVKHLQA---RNHICGMIGNGVNDAPALKKADIGIA 282 (447)
Q Consensus 246 ~K~~iV~~lq~---~g~~v~~iGDg~ND~~al~~A~vGIa 282 (447)
.|...++.+.. .-..|++|+|..++..+-..+++-|.
T Consensus 122 ~k~~~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i~ 161 (195)
T 2hhl_A 122 HRGNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQ 161 (195)
T ss_dssp ETTEEECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEECC
T ss_pred cCCceeeeHhHhCCChhHEEEEECCHHHhhhCccCccEEe
Confidence 11112222222 33469999999999988777776654
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=90.26 E-value=0.085 Score=46.61 Aligned_cols=91 Identities=14% Similarity=0.055 Sum_probs=62.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
.+||++.+.++.|.+. +++++.|......|..+.+.++... .+ ...+.+++. ..
T Consensus 55 ~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~-~f-~~~~~rd~~-----------------------~~ 108 (181)
T 2ght_A 55 LKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWG-AF-RARLFRESC-----------------------VF 108 (181)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTC-CE-EEEECGGGS-----------------------EE
T ss_pred EeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCC-cE-EEEEeccCc-----------------------ee
Confidence 4799999999999998 9999999999999999999999853 11 111111110 00
Q ss_pred hHHHHHHHHh---hcCCEEEEEcCCCCchhHHhhcCeeEE
Q 013242 246 HKYEIVKHLQ---ARNHICGMIGNGVNDAPALKKADIGIA 282 (447)
Q Consensus 246 ~K~~iV~~lq---~~g~~v~~iGDg~ND~~al~~A~vGIa 282 (447)
.|...++.+. ..-..|++|||..++..+-..+++-|.
T Consensus 109 ~k~~~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i~ 148 (181)
T 2ght_A 109 HRGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPVA 148 (181)
T ss_dssp ETTEEECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCCC
T ss_pred cCCcEeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEec
Confidence 1111222222 233469999999999988777776653
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=88.02 E-value=0.58 Score=43.91 Aligned_cols=42 Identities=19% Similarity=0.166 Sum_probs=38.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 206 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~ 206 (447)
..+.+.+.++|+++++.|++++++||++...+..+.+.+|+.
T Consensus 20 ~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 61 (288)
T 1nrw_A 20 HQVSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIK 61 (288)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCC
T ss_pred CccCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 347788999999999999999999999999999999988875
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=86.06 E-value=2.4 Score=38.94 Aligned_cols=51 Identities=22% Similarity=0.285 Sum_probs=34.3
Q ss_pred hcCCEEEEEcCCC-CchhHHhhcCee-EEecC--c-hHHHHh---hcchhccCCChhHHHH
Q 013242 256 ARNHICGMIGNGV-NDAPALKKADIG-IAVAD--A-TDAARS---AADIVLTEPGLNVIIT 308 (447)
Q Consensus 256 ~~g~~v~~iGDg~-ND~~al~~A~vG-Ia~~~--a-~~~a~~---aAD~vl~~~~~~~i~~ 308 (447)
-....++||||+. +|+.+-+.||+. |.+.. . .+.... .+|+++.+ +..+..
T Consensus 200 ~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~~--l~el~~ 258 (263)
T 1zjj_A 200 FPGEELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKSEYKPDLVLPS--VYELID 258 (263)
T ss_dssp STTCEEEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTTCSSCCSEEESS--GGGGGG
T ss_pred CCcccEEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHhcCCCCCEEECC--HHHHHH
Confidence 3467899999995 999999999986 45542 2 222222 47887743 655543
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=85.62 E-value=0.95 Score=41.65 Aligned_cols=38 Identities=24% Similarity=0.272 Sum_probs=32.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCC
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGM 205 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi 205 (447)
..+.+.+.++|++|++.|++++++||+.... +.+.++.
T Consensus 20 ~~i~~~~~~~l~~l~~~g~~~~iaTGR~~~~---~~~~l~~ 57 (246)
T 3f9r_A 20 LCQTDEMRALIKRARGAGFCVGTVGGSDFAK---QVEQLGR 57 (246)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCHHH---HHHHHCT
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECCCCHHH---HHHHhhh
Confidence 3578999999999999999999999999884 5667774
|
| >2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A* | Back alignment and structure |
|---|
Probab=80.85 E-value=2.7 Score=43.30 Aligned_cols=36 Identities=14% Similarity=0.117 Sum_probs=33.6
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHh-CC
Q 013242 169 HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL-GM 205 (447)
Q Consensus 169 ~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~l-Gi 205 (447)
|+.+..+++++++| ++.++|..+..-+..++..+ |+
T Consensus 249 p~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~ 285 (555)
T 2jc9_A 249 GKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDF 285 (555)
T ss_dssp THHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCS
T ss_pred hHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCC
Confidence 58899999999999 99999999999999999998 75
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 447 | ||||
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 8e-29 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 4e-26 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 3e-19 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 3e-12 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 6e-09 | |
| d1k1ea_ | 177 | c.108.1.5 (A:) Probable phosphatase YrbI {Haemophi | 2e-08 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 7e-08 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 1e-07 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 1e-07 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 3e-07 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 4e-07 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 8e-07 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 1e-06 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 1e-05 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 2e-05 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 3e-05 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 3e-05 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 4e-05 | |
| d1s2oa1 | 244 | c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 { | 0.003 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 109 bits (272), Expect = 8e-29
Identities = 55/156 (35%), Positives = 81/156 (51%), Gaps = 1/156 (0%)
Query: 156 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGM-GTNMYPSSA 214
DPP + +I+ G+ V MITGD A RR+G+ G N +
Sbjct: 10 TGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADR 69
Query: 215 LSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPAL 274
+ + E +A FA V P HK +IV++LQ+ + I M G+GVNDAPAL
Sbjct: 70 AYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPAL 129
Query: 275 KKADIGIAVADATDAARSAADIVLTEPGLNVIITAV 310
KKA+IGIA+ T A++A+++VL + + I+ AV
Sbjct: 130 KKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAV 165
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 106 bits (266), Expect = 4e-26
Identities = 27/331 (8%), Positives = 85/331 (25%), Gaps = 37/331 (11%)
Query: 3 VLCCDKTGTLTLNKLTV-----DKNLIEIFAGGVDAD-------TVVLMAARASQVENLD 50
+ + + + DK L ++ + G++++ + + ++ + +
Sbjct: 41 HIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIHLIDILKKLSHDE 100
Query: 51 VIDAAIVGMLADP--KEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQIL 108
+ + + ++ + L + + + + + ++
Sbjct: 101 IEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELH 160
Query: 109 NLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDP-- 166
+ + A+ + + + + K+ + + + G I
Sbjct: 161 VSDATLFSL----KGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTF-KTGYIYQEIILR 215
Query: 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQD------- 219
P+ + + G + + TG LG+ + D
Sbjct: 216 PVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENM 275
Query: 220 -RDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKAD 278
+ P A Y + ++G+ + D + +K
Sbjct: 276 YPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIG 335
Query: 279 I-GIAVA-------DATDAARSAADIVLTEP 301
I A + AD V+
Sbjct: 336 ATFIGTLTGLKGKDAAGELEAHHADYVINHL 366
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 81.7 bits (201), Expect = 3e-19
Identities = 41/155 (26%), Positives = 61/155 (39%), Gaps = 31/155 (20%)
Query: 156 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL 215
D + ++ +G+ V MITGD A+ R L + +
Sbjct: 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL-- 68
Query: 216 SGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALK 275
P K E VK LQA+ + +G+G+NDAPAL
Sbjct: 69 ----------------------------PHQKSEEVKKLQAK-EVVAFVGDGINDAPALA 99
Query: 276 KADIGIAVADATDAARSAADIVLTEPGLNVIITAV 310
+AD+GIAV +D A + DIVL L ++ A+
Sbjct: 100 QADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAI 134
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 63.7 bits (154), Expect = 3e-12
Identities = 26/148 (17%), Positives = 50/148 (33%), Gaps = 27/148 (18%)
Query: 50 DVIDAAIVGMLA----DPKEARADIQEVHFLPFDPTGKR--TALTYIDSEGKMHRVTKGS 103
D ++A++ + ++ R +V + F+ T K + D+ V KG+
Sbjct: 66 DASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGA 125
Query: 104 PEQILNLLHNKSKIGRKV----------NAVINKFAERGLRSLAVAYQEVPEGSKESSGS 153
PE+IL+ + G+++ + G R L +P G
Sbjct: 126 PERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFK 185
Query: 154 P-----------WQFIGLIPLFDPPIHD 170
F+GL+ + D H
Sbjct: 186 FDTDELNFPTEKLCFVGLMSMIDHHHHH 213
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 53.8 bits (128), Expect = 6e-09
Identities = 22/150 (14%), Positives = 42/150 (28%), Gaps = 6/150 (4%)
Query: 173 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDEL 232
E + + +I+G + +Y + A D
Sbjct: 82 EFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGT 141
Query: 233 IEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARS 292
+ K ++ L N MIG+ V D A K +D+ A + R
Sbjct: 142 ------CSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECRE 195
Query: 293 AADIVLTEPGLNVIITAVLISRAIFQRMRN 322
L I + + + + ++N
Sbjct: 196 QNLNHLPYQDFYEIRKEIENVKEVQEWLQN 225
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} Length = 177 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Score = 51.2 bits (122), Expect = 2e-08
Identities = 16/59 (27%), Positives = 24/59 (40%)
Query: 244 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPG 302
++++K IG+ D PA AVADA ++A D VL+ G
Sbjct: 82 ETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHG 140
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 50.8 bits (120), Expect = 7e-08
Identities = 15/68 (22%), Positives = 24/68 (35%)
Query: 243 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPG 302
+ + L + +G+G ND A K +AVA A + AD V +
Sbjct: 153 KGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEY 212
Query: 303 LNVIITAV 310
A+
Sbjct: 213 GEGGAEAI 220
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.9 bits (118), Expect = 1e-07
Identities = 31/197 (15%), Positives = 59/197 (29%), Gaps = 16/197 (8%)
Query: 108 LNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPP 167
++ L + V + + + A G A E + S +
Sbjct: 27 IDELAKICGVEDAV-SEMTRRAMGGAVPFKAALTERLALIQPSR--EQVQRLIAEQPPHL 83
Query: 168 IHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVAL 227
E + R + V +I+G +I + +L + ++ L E
Sbjct: 84 TPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGE----- 138
Query: 228 PVDELIEKADGFAGVFPEHKYEIVKHLQARNHI--CGMIGNGVNDAPALKKADIGIAVA- 284
+ K +++K L+ + H MIG+G D A AD I
Sbjct: 139 ----YAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGG 194
Query: 285 -DATDAARSAADIVLTE 300
+ A +T+
Sbjct: 195 NVIRQQVKDNAKWYITD 211
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 49.8 bits (117), Expect = 1e-07
Identities = 18/72 (25%), Positives = 27/72 (37%), Gaps = 1/72 (1%)
Query: 239 FAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVL 298
E +I K +G+G ND KKA + IA A + ADI +
Sbjct: 139 KENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICI 197
Query: 299 TEPGLNVIITAV 310
+ L I+ +
Sbjct: 198 EKRDLREILKYI 209
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 48.7 bits (115), Expect = 3e-07
Identities = 23/188 (12%), Positives = 53/188 (28%), Gaps = 33/188 (17%)
Query: 1 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGML 60
+ LC D + + + G + + + + + +
Sbjct: 56 ICALCNDSSLDFN------ETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERAN 109
Query: 61 ADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHR-----VTKGSPEQILNLLHNKS 115
A R +++ L F K ++ ++ KG+PE +++ +
Sbjct: 110 ACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVR 169
Query: 116 KIGRKV------------NAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQ------- 156
+V LR LA+A ++ P +E
Sbjct: 170 VGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYET 229
Query: 157 ---FIGLI 161
F+G++
Sbjct: 230 DLTFVGVV 237
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 48.4 bits (114), Expect = 4e-07
Identities = 32/212 (15%), Positives = 61/212 (28%), Gaps = 17/212 (8%)
Query: 110 LLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIH 169
L I K I ++GL +++ V + +
Sbjct: 14 LTDRDRLISTKAIESIRSAEKKGLT-VSLLSGNVIPVVYALKIFLGINGPVFGENGGIMF 72
Query: 170 DSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPV 229
D+ +I++ S T L + + TN + ++ E + +
Sbjct: 73 DNDGSIKKFFS-----NEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRK 127
Query: 230 DELIEKADGFAGVF-------PEHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKAD 278
+ F + E K V L+ + +IG+ ND P +
Sbjct: 128 EAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPV 187
Query: 279 IGIAVADATDAARSAADIVLTEPGLNVIITAV 310
A+ATD ++ +D V I
Sbjct: 188 RKACPANATDNIKAVSDFVSDYSYGEEIGQIF 219
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 47.2 bits (111), Expect = 8e-07
Identities = 10/58 (17%), Positives = 18/58 (31%)
Query: 243 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 300
+ K + V ++ + G+ ND L +A GI + R
Sbjct: 130 QKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVH 187
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 47.7 bits (112), Expect = 1e-06
Identities = 19/68 (27%), Positives = 29/68 (42%)
Query: 244 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGL 303
++KH N ++G+ ND L AVA+ATD+A+S A VL
Sbjct: 209 YTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHR 268
Query: 304 NVIITAVL 311
+ +L
Sbjct: 269 EGAVAYLL 276
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 44.1 bits (103), Expect = 1e-05
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 246 HKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 297
K + + + I G+G ND L+ A IG+A+ A + ++AAD V
Sbjct: 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYV 241
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 44.2 bits (103), Expect = 2e-05
Identities = 12/53 (22%), Positives = 23/53 (43%)
Query: 245 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 297
+ L + IG+ ND ++ A +G+AV +A + + A+ V
Sbjct: 200 TGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFV 252
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 43.4 bits (101), Expect = 3e-05
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 246 HKYEIVKHLQARNHICG----MIGNGVNDAPALKKADIGIAVADATDAARSAADIV 297
K + +K L + +I +G+ +ND L+ A G+A+ +A + +S AD V
Sbjct: 213 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAV 268
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 43.0 bits (100), Expect = 3e-05
Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
Query: 214 ALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPA 273
LS + +D V +E ++ + + I + G+ ND
Sbjct: 163 ILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIV-VFGDNENDLFM 221
Query: 274 LKKADIGIAVADATDAARSAADIV 297
++A + +A+ +A + + A+DIV
Sbjct: 222 FEEAGLRVAMENAIEKVKEASDIV 245
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 43.0 bits (100), Expect = 4e-05
Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 4/69 (5%)
Query: 246 HKYEIVKHLQARNHICG----MIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEP 301
HK + L R + IG+ NDA LK A A+ +A + + A +
Sbjct: 190 HKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDN 249
Query: 302 GLNVIITAV 310
+ +
Sbjct: 250 NHEGALNVI 258
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Score = 36.9 bits (84), Expect = 0.003
Identities = 9/59 (15%), Positives = 17/59 (28%)
Query: 243 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEP 301
+ +HL + G+ ND + + G+ V +A D
Sbjct: 163 KGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSR 221
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 447 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.98 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.96 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.93 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.83 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.6 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.49 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.46 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.4 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.39 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.36 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.35 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.33 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.23 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.23 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.22 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.22 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.21 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.19 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.07 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 99.01 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.87 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 98.71 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.65 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.4 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 98.1 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 98.04 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 98.02 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.98 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.96 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.91 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 97.68 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 97.64 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 97.63 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 97.5 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 97.46 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 97.43 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 97.38 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 97.17 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 97.12 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 97.07 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 96.92 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 96.86 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 96.79 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 96.75 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 96.63 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 96.47 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 96.38 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 96.3 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 96.29 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 96.17 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 96.05 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 95.18 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 94.96 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 94.95 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 94.39 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 92.67 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 80.98 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.98 E-value=9.4e-33 Score=245.01 Aligned_cols=148 Identities=38% Similarity=0.531 Sum_probs=128.5
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC--cccccCCcchhhhhcCChhHHHhhccchhcc
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP--SSALSGQDRDESIVALPVDELIEKADGFAGV 242 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~ 242 (447)
||||++++++|+.|+++||+|+|+|||+..+|..+|+++||..+... ...+.+.+.+ .....+..+..++..+|+++
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~v~ar~ 97 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFD-DLPLAEQREACRRACCFARV 97 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHH-HSCHHHHHHHHHHCCEEESC
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccc-hhhHHHHhhhhhhhhhhhcc
Confidence 99999999999999999999999999999999999999999754321 1122222221 12222345567788999999
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHH
Q 013242 243 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLIS 313 (447)
Q Consensus 243 ~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~ 313 (447)
+|++|..+|+.||++|+.|+|+|||.||+|||+.|||||+|+++++.++++||+++.+++|..|.++|+||
T Consensus 98 ~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 98 EPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred chhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEeccccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.96 E-value=2.2e-29 Score=214.76 Aligned_cols=125 Identities=34% Similarity=0.479 Sum_probs=109.9
Q ss_pred EEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhh
Q 013242 156 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEK 235 (447)
Q Consensus 156 ~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (447)
+..+.++++|++|++++++|+.|+++||+++|+|||+..++..+|++|||+
T Consensus 11 ~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~----------------------------- 61 (135)
T d2b8ea1 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD----------------------------- 61 (135)
T ss_dssp CCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------------------
T ss_pred ceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh-----------------------------
Confidence 345578999999999999999999999999999999999999999999995
Q ss_pred ccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 013242 236 ADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 236 ~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
.+|++++|++|..+|+.+|.. +.|+|+|||.||+|||+.||+||+|+++++.++++||+++++++|+.|+.+|+
T Consensus 62 -~v~~~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advgia~~~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 62 -LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp -EEECSCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEEEEECCC--------SEEESSCCTHHHHHHHC
T ss_pred -hhccccchhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCCeeeecCccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence 579999999999999999875 68999999999999999999999999999999999999999999999998874
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.93 E-value=3.1e-29 Score=251.23 Aligned_cols=300 Identities=9% Similarity=-0.016 Sum_probs=201.1
Q ss_pred cEEEecchhhcccCceEEEeeEee-----cccCCCChH-HHH------HHHHHhcCCCCCChHHHHHHHhhCCch----h
Q 013242 2 DVLCCDKTGTLTLNKLTVDKNLIE-----IFAGGVDAD-TVV------LMAARASQVENLDVIDAAIVGMLADPK----E 65 (447)
Q Consensus 2 ~~i~~DKTGTLT~n~~~v~~~~i~-----~~~~~~~~~-~~l------~~a~~~~~~~~~~pi~~ai~~~~~~~~----~ 65 (447)
.++|+|||||+|.|+|.+..+.-+ ....|.+.+ +++ .++..+... .+|-..+++....... .
T Consensus 40 ~~i~~~k~~~~t~~~i~~~~~~~~~il~~~k~~g~n~~~dl~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 117 (380)
T d1qyia_ 40 SHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIHLIDILKKL--SHDEIEAFMYQDEPVELKLQN 117 (380)
T ss_dssp CCCCGGGCCHHHHHHHHHHHHTTTHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTS--CHHHHHHHHHCSSCHHHHHTT
T ss_pred eeeecCcccchhhhhheeeeecchhhhHhhhhcCCChhHHHHHHHHHHHHHHHHhhc--CCCcHHHHHHHHhhccchHHH
Confidence 468999999999999987542100 011233322 111 122222222 2344555554332211 2
Q ss_pred hhccceEEEEEecCCCCceEEEEEEecCCeEEEEEcCcHHHHHhhccCChhhHHHHHHHHHHHHHhhhhhhhhhhcccCC
Q 013242 66 ARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPE 145 (447)
Q Consensus 66 ~~~~~~~~~~~pF~~~~kr~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~ 145 (447)
.+..+.....+||++.+|+|+......++.+..+.+|+++.+. ........+...+.+++++|+|+++++++..+.
T Consensus 118 ~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~----~~~~~~~~~~~~~~~~a~~~~r~l~~~~~~~~~ 193 (380)
T d1qyia_ 118 ISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELH----VSDATLFSLKGALWTLAQEVYQEWYLGSKLYED 193 (380)
T ss_dssp SGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTT----CSCCGGGSTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhcC----CcHHHHHHHHhHHHHHHHHHHHHHHHhhhcccc
Confidence 2445666677899999999987655444444455667766542 223334456677889999999999999986542
Q ss_pred CCcCCCCCCcEEEEeccCCCCCC--cchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcch--
Q 013242 146 GSKESSGSPWQFIGLIPLFDPPI--HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRD-- 221 (447)
Q Consensus 146 ~~~~~~e~~~~~lG~i~l~d~~r--~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~-- 221 (447)
.+.. ....+...|++..+++++ ++++++|+.|+++||+++|+|||+..+|..+++++||........++.+.+..
T Consensus 194 ~~~~-~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~ 272 (380)
T d1qyia_ 194 VEKK-IARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEA 272 (380)
T ss_dssp HHCS-CCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHH
T ss_pred cccc-cchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEEecchhhhh
Confidence 2211 122234568999999965 49999999999999999999999999999999999996422222222222110
Q ss_pred ------hhhhcCChhHHHhhccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcC---eeEEec-CchHHH-
Q 013242 222 ------ESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKAD---IGIAVA-DATDAA- 290 (447)
Q Consensus 222 ------~~~~~~~~~~~~~~~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~---vGIa~~-~a~~~a- 290 (447)
......+..+.+..+..+++++|++|..+++.++..++.|+|+|||.||++|++.|| |||+|| .+++..
T Consensus 273 ~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~ 352 (380)
T d1qyia_ 273 ENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAG 352 (380)
T ss_dssp HHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHH
T ss_pred hhhccccccccCCChHHHHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHH
Confidence 011123334555666678999999999999999999999999999999999999999 999998 344433
Q ss_pred ---HhhcchhccCCChhHHHHHH
Q 013242 291 ---RSAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 291 ---~~aAD~vl~~~~~~~i~~~i 310 (447)
...||+|+ +++..+..++
T Consensus 353 el~~~~AD~ii--~~~~el~~il 373 (380)
T d1qyia_ 353 ELEAHHADYVI--NHLGELRGVL 373 (380)
T ss_dssp HHHHTTCSEEE--SSGGGHHHHH
T ss_pred HHHhCCCCEEE--CCHHHHHHHH
Confidence 34799999 4477766554
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.83 E-value=6.2e-21 Score=175.35 Aligned_cols=122 Identities=20% Similarity=0.266 Sum_probs=98.9
Q ss_pred CChHHHHHHHhhC----CchhhhccceEEEEEecCCCCceEEEEEEec--CCeEEEEEcCcHHHHHhhcc----------
Q 013242 49 LDVIDAAIVGMLA----DPKEARADIQEVHFLPFDPTGKRTALTYIDS--EGKMHRVTKGSPEQILNLLH---------- 112 (447)
Q Consensus 49 ~~pi~~ai~~~~~----~~~~~~~~~~~~~~~pF~~~~kr~~v~~~~~--~g~~~~~~KGa~e~i~~~~~---------- 112 (447)
.+|.|.|++.++. +....+..++.++.+||+|.+|+|+++++.. ++.+++|+|||||.|+++|+
T Consensus 65 GdptE~ALl~~a~~~~~~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~~ 144 (214)
T d1q3ia_ 65 GDASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEIP 144 (214)
T ss_dssp SCHHHHHHHHHHHHHHSCHHHHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEEE
T ss_pred cChHHHHHHHHHHHhCCCHHHHHhhCcEeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheeeCCceee
Confidence 4899999998753 3445678899999999999999999999863 46688999999999999997
Q ss_pred CChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCC-----------cCCCCCCcEEEEeccCCCCCCcc
Q 013242 113 NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGS-----------KESSGSPWQFIGLIPLFDPPIHD 170 (447)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~-----------~~~~e~~~~~lG~i~l~d~~r~~ 170 (447)
.+++..+.+.+.+++|+++|+|||++||+.++..+ .+..+++|+|+|++++.||||++
T Consensus 145 l~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 145 LDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred chHHHHHHHHHHHHHHhhCCcEEEEEEEEecCccccccccccChhhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 45677889999999999999999999999987543 23457899999999999999975
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.60 E-value=2.8e-16 Score=146.24 Aligned_cols=129 Identities=16% Similarity=0.281 Sum_probs=99.1
Q ss_pred HHHHHHHHhcCC------C------CCChHHHHHHHhhCCc--------------------hhhhccceEEEEEecCCCC
Q 013242 35 TVVLMAARASQV------E------NLDVIDAAIVGMLADP--------------------KEARADIQEVHFLPFDPTG 82 (447)
Q Consensus 35 ~~l~~a~~~~~~------~------~~~pi~~ai~~~~~~~--------------------~~~~~~~~~~~~~pF~~~~ 82 (447)
.++..+++|+.. . ..+|.+.|++.++... ...+..++.++.+||+|.+
T Consensus 52 ~ll~~~~LCn~a~l~~~~~~~~~~~~G~pTE~ALl~~a~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~pF~S~r 131 (239)
T d1wpga3 52 ELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDR 131 (239)
T ss_dssp HHHHHHHHSCSCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCSSSCHHHHTTHHHHHHHHHEEEEEEEEEETTT
T ss_pred HHHHHHHhcCCCEeeecCCCCeEEEcCCCCcHHHHHHHHHhCCChHHhhccchhhhhccchhhhhhhCeEEEEeeecccc
Confidence 456666666532 1 1479999998765310 1125678999999999999
Q ss_pred ceEEEEEEecCC-----eEEEEEcCcHHHHHhhcc----------CChhhHHHHHHHHHHH--HHhhhhhhhhhhcccCC
Q 013242 83 KRTALTYIDSEG-----KMHRVTKGSPEQILNLLH----------NKSKIGRKVNAVINKF--AERGLRSLAVAYQEVPE 145 (447)
Q Consensus 83 kr~~v~~~~~~g-----~~~~~~KGa~e~i~~~~~----------~~~~~~~~~~~~~~~~--~~~G~r~l~vA~~~~~~ 145 (447)
|||+++++..++ .+.+|+|||||.|+++|. .+++..+.+.+.+++| +++|+|||++||+.++.
T Consensus 132 K~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvLa~A~k~~~~ 211 (239)
T d1wpga3 132 KSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPP 211 (239)
T ss_dssp TEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTSSCCCEEEEEEEESSCC
T ss_pred cEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceecCCceeeCCHHHHHHHHHHHHHHhHhhCCCEEEEEEEEECCc
Confidence 999999987554 367999999999999996 3456677788888876 67999999999999976
Q ss_pred CCc----------CCCCCCcEEEEeccC
Q 013242 146 GSK----------ESSGSPWQFIGLIPL 163 (447)
Q Consensus 146 ~~~----------~~~e~~~~~lG~i~l 163 (447)
.+. +.+|++|+|+|++++
T Consensus 212 ~~~~~~~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 212 KREEMVLDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp CGGGCCTTCGGGHHHHTCSEEEEEEEEE
T ss_pred ccccccccchhhHHHhcCCCEEEEEECC
Confidence 532 235789999999975
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.49 E-value=1.2e-14 Score=132.38 Aligned_cols=148 Identities=23% Similarity=0.209 Sum_probs=104.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCc--cc-ccC------Ccchh----------h---
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPS--SA-LSG------QDRDE----------S--- 223 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~--~~-~~~------~~~~~----------~--- 223 (447)
.+.+.+.++|++|++.|++++++||+....+..++..+++....+.. .. ... ..... .
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 98 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHHHHHhccc
Confidence 47789999999999999999999999999999999999986432100 00 000 00000 0
Q ss_pred ------h-----------hcCC---hhHHHhhcc---------chhccC--hhhHHHHHHHHhhc----CCEEEEEcCCC
Q 013242 224 ------I-----------VALP---VDELIEKAD---------GFAGVF--PEHKYEIVKHLQAR----NHICGMIGNGV 268 (447)
Q Consensus 224 ------~-----------~~~~---~~~~~~~~~---------v~a~~~--p~~K~~iV~~lq~~----g~~v~~iGDg~ 268 (447)
. .... ..++..+.. .+..+. ...|...++.+.++ ...|+++|||.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~ 178 (230)
T d1wr8a_ 99 ARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE 178 (230)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred ccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCc
Confidence 0 0000 011111110 112222 34678877776553 45699999999
Q ss_pred CchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHH
Q 013242 269 NDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLIS 313 (447)
Q Consensus 269 ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~ 313 (447)
||++||+.||+||||+|+++.++++||+|+..++.+++.++|..-
T Consensus 179 NDi~ml~~ag~~vav~na~~~~k~~A~~v~~~~~~~gv~~~i~~~ 223 (230)
T d1wr8a_ 179 NDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIYHI 223 (230)
T ss_dssp GGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHHHH
T ss_pred cHHHHHHHCCeEEEECCCCHHHHHhCCEEECCCCcCHHHHHHHHH
Confidence 999999999999999999999999999999999999999888753
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.46 E-value=1.2e-13 Score=126.15 Aligned_cols=149 Identities=20% Similarity=0.147 Sum_probs=105.3
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCc--ccccCCc--ch-----h----h---h---
Q 013242 164 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPS--SALSGQD--RD-----E----S---I--- 224 (447)
Q Consensus 164 ~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~--~~~~~~~--~~-----~----~---~--- 224 (447)
...+.+++.+++++|++.|++++++||++...+..+...+|+....+.. ..+.... .. + . .
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 97 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHh
Confidence 3457789999999999999999999999999999999999986532210 0000000 00 0 0 0
Q ss_pred --------------------hcCChhHHHhh-----c-----cchhccCh--hhHHHHHHHHhhc----CCEEEEEcCCC
Q 013242 225 --------------------VALPVDELIEK-----A-----DGFAGVFP--EHKYEIVKHLQAR----NHICGMIGNGV 268 (447)
Q Consensus 225 --------------------~~~~~~~~~~~-----~-----~v~a~~~p--~~K~~iV~~lq~~----g~~v~~iGDg~ 268 (447)
.....+.+... . ..+..+.| .+|...++.+.++ ...|+++|||.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~ 177 (225)
T d1l6ra_ 98 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 177 (225)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred cCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCc
Confidence 00000001000 0 01222333 4788888877654 23599999999
Q ss_pred CchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHH
Q 013242 269 NDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 312 (447)
Q Consensus 269 ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~ 312 (447)
||.+||+.|++||||+|+.+.+++.||+|+..++..+|.++++.
T Consensus 178 nD~~m~~~a~~~vav~na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 178 NDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp GGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred chHHHHHHCCeEEEECCCcHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 99999999999999999999999999999999999999988863
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.40 E-value=1.3e-13 Score=129.15 Aligned_cols=70 Identities=23% Similarity=0.239 Sum_probs=61.8
Q ss_pred cChh--hHHHHHHHHhhc----CCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 013242 242 VFPE--HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 242 ~~p~--~K~~iV~~lq~~----g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
+.|. +|...++.+.+. ...++++|||.||.+||+.|++|+||+|+.+.++..||+|+..++-+|+.++|+
T Consensus 191 i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~~~lk~~a~~i~~~~~~~Gv~~~l~ 266 (271)
T d1rkqa_ 191 ILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIE 266 (271)
T ss_dssp EEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred ecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCcChHHHHHH
Confidence 4454 599999888764 335999999999999999999999999999999999999999999999998876
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.39 E-value=4.1e-13 Score=126.49 Aligned_cols=70 Identities=21% Similarity=0.276 Sum_probs=62.1
Q ss_pred cChh--hHHHHHHHHhhc----CCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 013242 242 VFPE--HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 242 ~~p~--~K~~iV~~lq~~----g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
++|. .|...++.+.+. ...|+++|||.||.+||+.|+.||||+||++.++..||+|+.+++.++|.++|+
T Consensus 207 i~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~~~~k~~A~~v~~~~~~~Gv~~~l~ 282 (285)
T d1nrwa_ 207 LSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMK 282 (285)
T ss_dssp EEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 4454 699999888765 235999999999999999999999999999999999999999999999998885
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.36 E-value=1.9e-13 Score=127.86 Aligned_cols=71 Identities=21% Similarity=0.256 Sum_probs=62.7
Q ss_pred ccChh--hHHHHHHHHhhc-C---CEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 013242 241 GVFPE--HKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 241 ~~~p~--~K~~iV~~lq~~-g---~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
+++|. +|...++.|.++ | ..|+++|||.||++||+.|++||||+|+.+.+|+.||+|+.+++.+||.++|+
T Consensus 183 di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 183 DLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp EEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 44554 599999888765 3 35999999999999999999999999999999999999999999999998886
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.35 E-value=8e-13 Score=116.64 Aligned_cols=101 Identities=25% Similarity=0.272 Sum_probs=83.5
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhhHHHHHH
Q 013242 173 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVK 252 (447)
Q Consensus 173 ~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~K~~iV~ 252 (447)
.+|+.|++.|+.+.++||+....+...++++++.. .+.. ..+|...++
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~------------------------------~~~~--~~~K~~~l~ 86 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL------------------------------FFLG--KLEKETACF 86 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE------------------------------EEES--CSCHHHHHH
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc------------------------------cccc--cccHHHHHH
Confidence 37999999999999999999999999999999851 1222 234555454
Q ss_pred HHhh----cCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhH
Q 013242 253 HLQA----RNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV 305 (447)
Q Consensus 253 ~lq~----~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~ 305 (447)
.+.+ ....|+++||+.||.|||+.|++|+||+||.+.++..||+|+..++-.+
T Consensus 87 ~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~nA~~~vk~~A~~Vt~~~GG~G 143 (177)
T d1k1ea_ 87 DLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKG 143 (177)
T ss_dssp HHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTT
T ss_pred HHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEcCCccHHHHHhCCEEeCCCCCCc
Confidence 4433 3467999999999999999999999999999999999999999887555
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.33 E-value=2e-13 Score=127.56 Aligned_cols=73 Identities=26% Similarity=0.283 Sum_probs=63.4
Q ss_pred hccChh--hHHHHHHHHhhc----CCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHH
Q 013242 240 AGVFPE--HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 312 (447)
Q Consensus 240 a~~~p~--~K~~iV~~lq~~----g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~ 312 (447)
.++.|. .|...++.|.++ ...++++|||.||++||+.|+.||||+||.+.+++.||+|+.+++.++|.++|+.
T Consensus 178 ~ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 178 ADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp CEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence 344453 699988888664 3569999999999999999999999999999999999999999999999998864
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.23 E-value=4e-12 Score=118.91 Aligned_cols=71 Identities=20% Similarity=0.294 Sum_probs=62.1
Q ss_pred ccChh--hHHHHHHHHhhc----CCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 013242 241 GVFPE--HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 241 ~~~p~--~K~~iV~~lq~~----g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
+++|. .|...++.+.++ ...|+++|||.||.+||+.|++||||+||++.+++.||+|+.+++.++++++|+
T Consensus 183 di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred eecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 34554 699988887664 235999999999999999999999999999999999999999999999998875
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.23 E-value=6e-12 Score=114.56 Aligned_cols=122 Identities=19% Similarity=0.205 Sum_probs=90.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccc----cCCcchhhhhcCChhHHHhhccchhc
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL----SGQDRDESIVALPVDELIEKADGFAG 241 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~v~a~ 241 (447)
+++|++.++|+.|++.|++++++||.....+.++++.+|++....-...+ .|.... . ......
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g-----~--------~~~~p~ 148 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAG-----F--------DETQPT 148 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEE-----E--------CTTSGG
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhcccc-----c--------eeeeee
Confidence 36899999999999999999999999999999999999996321100000 010000 0 000112
Q ss_pred cChhhHHHHHHHHhhc--CCEEEEEcCCCCchhHHhhcCeeEEecC--chHHHHhhcchhccC
Q 013242 242 VFPEHKYEIVKHLQAR--NHICGMIGNGVNDAPALKKADIGIAVAD--ATDAARSAADIVLTE 300 (447)
Q Consensus 242 ~~p~~K~~iV~~lq~~--g~~v~~iGDg~ND~~al~~A~vGIa~~~--a~~~a~~aAD~vl~~ 300 (447)
..+..|..+++.++.+ ...|+++|||.||++|++.||++||++. .....++.||+++.+
T Consensus 149 ~~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~ 211 (217)
T d1nnla_ 149 AESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD 211 (217)
T ss_dssp GSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESC
T ss_pred eccchHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeCC
Confidence 3467799999999764 3469999999999999999999999973 456777889998854
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.22 E-value=3.9e-12 Score=115.56 Aligned_cols=149 Identities=15% Similarity=0.047 Sum_probs=105.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
+++|++.+.|+.|++.|+++.++|+.....+..+.+++|+....+........+.... ..+ ......+....|.
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~--~~~----~~~~~~~~~~k~~ 148 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHI--DWP----HSCKGTCSNQCGC 148 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEE--ECT----TCCCTTCCSCCSS
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCccee--ccc----cccccccccCCHH
Confidence 3789999999999999999999999999999999999998543221111111110000 000 0001234567888
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRM 320 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~~r~~~~~i 320 (447)
.|..+++.++..++.|+|+||+.||++|++.||+++|++...+.+....--...-.+|+.|...+..-..+.+.+
T Consensus 149 ~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~~~~~~ 223 (226)
T d2feaa1 149 CKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIRKEIENVKEVQEWL 223 (226)
T ss_dssp CHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECCSSHHHHHHHHHTSHHHHHHH
T ss_pred HHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEecchHHHHHHcCCCeeecCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999998766656544321222367998888777655544443
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.22 E-value=2.5e-12 Score=114.54 Aligned_cols=136 Identities=20% Similarity=0.186 Sum_probs=94.4
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccCh
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 244 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p 244 (447)
.++.+++.+.++.++..|..++++||.....+....++.++.................... .....+...+
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 144 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVE---------GEVLKENAKG 144 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEE---------CSSCSTTHHH
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhcccccccccccc---------cccccccccc
Confidence 3677899999999999999999999999999999999988753111000000000000000 0000011112
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHH
Q 013242 245 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 245 ~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i 310 (447)
.....+.+.++.....++++|||.||++|++.||+|||| |+.+.+++.||+|+..+|+++|.++|
T Consensus 145 ~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~-na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 145 EILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE-SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred chhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE-CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 222333444444456799999999999999999999999 99999999999999999999987764
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.21 E-value=4.5e-12 Score=118.67 Aligned_cols=66 Identities=29% Similarity=0.319 Sum_probs=54.7
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCC-hhHHHHHHH
Q 013242 246 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPG-LNVIITAVL 311 (447)
Q Consensus 246 ~K~~iV~~lq~~----g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~-~~~i~~~i~ 311 (447)
.|...++.+.+. ...|+++|||.||.+||+.||+||||+||.+.++..||+|+..++ ..++..+++
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCCCHHHHHhCCEEECCcCCCcHHHHHHH
Confidence 577777776654 346999999999999999999999999999999999999997654 445666654
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.19 E-value=4.6e-11 Score=105.91 Aligned_cols=130 Identities=16% Similarity=0.181 Sum_probs=90.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
+..+.....+..+ +.+.+++++|+............+++............... ........+.
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------------~~~~~~~~~~ 132 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDR---------------VVGYQLRQKD 132 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSC---------------EEEEECCSSS
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeecccc---------------cccccccchh
Confidence 3455666666655 57899999999999999999999988632111111100000 0112333455
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 312 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~~ 312 (447)
.+...++.++.....|+|||||.||++||+.||+||||+...+..++++|+++. .+++.+..+|..
T Consensus 133 ~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAmna~~~v~~~~~~~~~~-~~~~d~~~~~~~ 198 (206)
T d1rkua_ 133 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFLK 198 (206)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSCEE-CSHHHHHHHHHH
T ss_pred hHHHHHHHhcccccceEEecCCccCHHHHHhCCccEEECCCHHHHHhCCCceee-cCHHHHHHHHHH
Confidence 667788888888999999999999999999999999994445555566677664 678888877665
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.07 E-value=4.3e-11 Score=109.19 Aligned_cols=44 Identities=11% Similarity=0.053 Sum_probs=39.8
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC
Q 013242 164 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 207 (447)
Q Consensus 164 ~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~ 207 (447)
.+...+.++++|++|+++|+.++++||++...+..+.+.+++..
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~ 58 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET 58 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccc
Confidence 44556789999999999999999999999999999999999864
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=99.01 E-value=2.3e-10 Score=104.98 Aligned_cols=68 Identities=18% Similarity=0.116 Sum_probs=57.8
Q ss_pred hhHHHHHHHHhhcC----CEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcch-------hccCCChhHHHHHHHH
Q 013242 245 EHKYEIVKHLQARN----HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADI-------VLTEPGLNVIITAVLI 312 (447)
Q Consensus 245 ~~K~~iV~~lq~~g----~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~-------vl~~~~~~~i~~~i~~ 312 (447)
.+|...++.+.+.. ..|+++|||.||.+||+.||.|++|+|+.+.+++.||. +...++..+|.++|+.
T Consensus 161 ~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~~ 239 (244)
T d1s2oa1 161 SNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred cchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeCCCCHHHHHHhhcccccceEEcCCCCccHHHHHHHH
Confidence 46999999887753 34999999999999999999999999999999999994 5566678888887753
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.87 E-value=3.5e-09 Score=95.17 Aligned_cols=41 Identities=15% Similarity=0.067 Sum_probs=38.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 206 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~ 206 (447)
.+.+.++++|++|+++|+.++++||++...+..+.+.+|+.
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 47789999999999999999999999999999999999985
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=98.71 E-value=3.3e-09 Score=88.84 Aligned_cols=122 Identities=22% Similarity=0.299 Sum_probs=92.6
Q ss_pred cCCCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCchh---hhccceEEEEEecCCCCceEEEEEEecCCeEEEEEcCcH
Q 013242 28 AGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKE---ARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSP 104 (447)
Q Consensus 28 ~~~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~~~---~~~~~~~~~~~pF~~~~kr~~v~~~~~~g~~~~~~KGa~ 104 (447)
..|.+.++++.+|+.++..++| |+++||+.++++... ....+.....+||....+...+. .+| ..+.+|++
T Consensus 10 ~~G~~~~ell~~AA~aE~~SeH-PlakAIv~~Ak~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~g--~~v~~G~~ 83 (136)
T d2a29a1 10 AQGVDEKTLADAAQLASLADET-PEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGIN---IDN--RMIRKGSV 83 (136)
T ss_dssp CTTCCHHHHHHHHHHHHHTCCS-HHHHHHHHHHHHHHCCCCCCTTTTTCEEEEEETTTTEEEEE---ETT--EEEEEECH
T ss_pred CCCCCHHHHHHHHHHHhCCCCc-hHHHHHHHHHHHhcCCCccccccccccccccccccceEEEE---ECC--EEEEecHH
Confidence 4799999999999999988776 999999998753221 11234445567887776554433 345 46778999
Q ss_pred HHHHhhcc-CChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEEEEeccCCCCCC
Q 013242 105 EQILNLLH-NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPI 168 (447)
Q Consensus 105 e~i~~~~~-~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~d~~r 168 (447)
..+..++. ....++..+.+.+++++++|.+++.||.+. +++|+|++.|++|
T Consensus 84 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va~d~-------------~~~G~i~l~D~iK 135 (136)
T d2a29a1 84 DAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS-------------RVLGVIALKDIVK 135 (136)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHHHHHHTTSEEEEEEETT-------------EEEEEEEEEESSC
T ss_pred HHHHHHHHHcCCCCcHHHHHHHHHHHHCCCeEEEEEECC-------------EEEEEEEEEeecC
Confidence 88776543 123456678888999999999999999987 9999999999986
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.65 E-value=8.8e-09 Score=92.70 Aligned_cols=53 Identities=19% Similarity=0.271 Sum_probs=47.6
Q ss_pred hHHHHHHHHhhc-CCEEEEEcCC----CCchhHHhhcC-eeEEecCchHHHHhhcchhc
Q 013242 246 HKYEIVKHLQAR-NHICGMIGNG----VNDAPALKKAD-IGIAVADATDAARSAADIVL 298 (447)
Q Consensus 246 ~K~~iV~~lq~~-g~~v~~iGDg----~ND~~al~~A~-vGIa~~~a~~~a~~aAD~vl 298 (447)
.|...++.|.+. ...|+++||+ .||.+||+.|+ .|+||+|+.+.++..+|+++
T Consensus 185 sKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~~k~~~~~~~ 243 (244)
T d2fuea1 185 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFF 243 (244)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHC
T ss_pred cHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHHHHHHHHhcC
Confidence 589999998764 5689999995 59999999997 79999999999999999987
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.40 E-value=4.6e-08 Score=87.35 Aligned_cols=61 Identities=10% Similarity=0.177 Sum_probs=45.2
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
+|...++.|..+. .++++||+.||.+||+.|+.|+||+++.. +.+|++++.+ ...+..+++
T Consensus 159 ~Kg~al~~l~~~~-~~i~~GDs~ND~~Mf~~~~~~~av~~g~~--~~~A~~~~~~--~~ev~~~l~ 219 (229)
T d1u02a_ 159 NKGSAIRSVRGER-PAIIAGDDATDEAAFEANDDALTIKVGEG--ETHAKFHVAD--YIEMRKILK 219 (229)
T ss_dssp CHHHHHHHHHTTS-CEEEEESSHHHHHHHHTTTTSEEEEESSS--CCCCSEEESS--HHHHHHHHH
T ss_pred CHHHHHHHHhccc-cceeecCCCChHHHHhccCCeEEEEeCCC--CccCeEEcCC--HHHHHHHHH
Confidence 6999999998764 57899999999999999977766654322 4578888854 444544443
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=98.10 E-value=1.9e-06 Score=77.13 Aligned_cols=124 Identities=14% Similarity=0.151 Sum_probs=79.4
Q ss_pred CCcchHHHHHHHHhCC-CeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 167 PIHDSAETIRRALSLG-LGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~G-i~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
+-|++.+++++|++.| +++.++|+.....+..+.+.+|+..-. . ..+.+.+.. ...-.|.
T Consensus 92 ~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~f-d-~i~~~~~~~-----------------~~k~~p~ 152 (228)
T d2hcfa1 92 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYF-P-FGAFADDAL-----------------DRNELPH 152 (228)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTC-S-CEECTTTCS-----------------SGGGHHH
T ss_pred ecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccc-c-ccccccccc-----------------cccchhH
Confidence 4689999999999987 899999999999999999999996321 1 111110000 0000111
Q ss_pred hHHHHHHHHhh---cCCEEEEEcCCCCchhHHhhcCee---EEecCc-hH-HHHhhcchhccCCChhHHHHHHH
Q 013242 246 HKYEIVKHLQA---RNHICGMIGNGVNDAPALKKADIG---IAVADA-TD-AARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 246 ~K~~iV~~lq~---~g~~v~~iGDg~ND~~al~~A~vG---Ia~~~a-~~-~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
.-...++.+.. ....++||||+.+|+.|-+.||+. |+.|.. .+ ..+..||+++ ++++.+..+|.
T Consensus 153 ~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi--~~~~el~~~l~ 224 (228)
T d2hcfa1 153 IALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLF--KNFAETDEVLA 224 (228)
T ss_dssp HHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEE--SCSCCHHHHHH
T ss_pred HHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEE--CCHHHHHHHHH
Confidence 11222333322 235799999999999999999954 444532 22 2344589998 45777666554
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.04 E-value=3.7e-06 Score=67.43 Aligned_cols=104 Identities=15% Similarity=0.196 Sum_probs=73.9
Q ss_pred CCChHHHHHHHHHhcCCCCCChHHHHHHHhhCCchhhhccceEEEEEecCCCCceEEEEEEecCCeEEEEEcCcHHHHHh
Q 013242 30 GVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILN 109 (447)
Q Consensus 30 ~~~~~~~l~~a~~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~~~~~pF~~~~kr~~v~~~~~~g~~~~~~KGa~e~i~~ 109 (447)
+.++++++.+++..+..++| |+++||+.++.+.+...........+|-. .+ .|+ .+..|+++++.+
T Consensus 9 ~~~e~elL~~aaslE~~S~H-PlA~AIv~~a~~~~~~~~~~~~~~~~~G~------Gi-----~g~--~v~vG~~~~~~~ 74 (113)
T d2b8ea2 9 NGDERELLRLAAIAERRSEH-PIAEAIVKKALEHGIELGEPEKVEVIAGE------GV-----VAD--GILVGNKRLMED 74 (113)
T ss_dssp SSCHHHHHHHHHHHTTTCCS-HHHHHHHHHHHTTTCCCCCCSCEEEETTT------EE-----EET--TEEEECHHHHHH
T ss_pred CCCHHHHHHHHHHHHCcCCC-chHHHHHHHHHHhcCCCCccccceeeccc------eE-----EeE--EEEECcHHHHHh
Confidence 45899999999999998887 99999999886543222222222223211 01 111 256799999876
Q ss_pred hccCChhhHHHHHHHHHHHHHhhhhhhhhhhcccCCCCcCCCCCCcEEEEeccC
Q 013242 110 LLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPL 163 (447)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~G~r~l~vA~~~~~~~~~~~~e~~~~~lG~i~l 163 (447)
.. -..++.+.+.+.++..+|.++++|+.++ .++|++++
T Consensus 75 ~~---~~~~~~~~~~~~~~~~~G~T~v~va~d~-------------~~~G~ial 112 (113)
T d2b8ea2 75 FG---VAVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAV 112 (113)
T ss_dssp TT---CCCCHHHHHHHHHHHTTTCEEEEEEETT-------------EEEEEEEE
T ss_pred cC---CCCCHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEE
Confidence 42 2355677888999999999999999987 89999875
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=98.02 E-value=7.1e-06 Score=74.60 Aligned_cols=100 Identities=17% Similarity=0.188 Sum_probs=71.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++++.|++.|+++.++||.+...+..+.+.+|+..-. ...++.+.+. ....-.|+
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f-~d~~~~~d~~-----------------~~~KP~p~ 160 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYK-PDFLVTPDDV-----------------PAGRPYPW 160 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCC-CSCCBCGGGS-----------------SCCTTSSH
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccc-cccccccccc-----------------cccccChH
Confidence 47899999999999999999999999999999999999985321 1111211110 01122344
Q ss_pred hHHHHHHHHhhc-CCEEEEEcCCCCchhHHhhcCee-EEe
Q 013242 246 HKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIG-IAV 283 (447)
Q Consensus 246 ~K~~iV~~lq~~-g~~v~~iGDg~ND~~al~~A~vG-Ia~ 283 (447)
.=..+++.+... ...|+||||+.+|+.+-+.||+- |++
T Consensus 161 ~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v 200 (257)
T d1swva_ 161 MCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGV 200 (257)
T ss_dssp HHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEE
Confidence 445566666653 46799999999999999999973 444
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.98 E-value=5.4e-06 Score=77.57 Aligned_cols=129 Identities=12% Similarity=0.071 Sum_probs=78.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCC---CC-cccccCCcchhhhhcCChhHHHhhccchhc
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNM---YP-SSALSGQDRDESIVALPVDELIEKADGFAG 241 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~ 241 (447)
++|+++++.++.|++.|+++.++||.-...+.++++++|+..+. +. ...+.+......... --
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~-------------~~ 201 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKG-------------EL 201 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECS-------------SC
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccC-------------Cc
Confidence 48999999999999999999999999999999999999986431 10 111111100000000 00
Q ss_pred cChhhHHHHH----HHHh--hcCCEEEEEcCCCCchhHHhh---cCeeEEec--Cc--h---HHHHhhcchhccCCC-hh
Q 013242 242 VFPEHKYEIV----KHLQ--ARNHICGMIGNGVNDAPALKK---ADIGIAVA--DA--T---DAARSAADIVLTEPG-LN 304 (447)
Q Consensus 242 ~~p~~K~~iV----~~lq--~~g~~v~~iGDg~ND~~al~~---A~vGIa~~--~a--~---~~a~~aAD~vl~~~~-~~ 304 (447)
.....|...+ ..++ .....++++|||+||+.|.+. ++..+++| +. . +.-..+-|+|+.++. ++
T Consensus 202 i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~~ 281 (291)
T d2bdua1 202 IHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLE 281 (291)
T ss_dssp CCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBCH
T ss_pred cccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEecCCChh
Confidence 1112222222 2222 235679999999999999874 34444444 32 1 223467899977654 44
Q ss_pred HHH
Q 013242 305 VII 307 (447)
Q Consensus 305 ~i~ 307 (447)
.+.
T Consensus 282 v~~ 284 (291)
T d2bdua1 282 VVN 284 (291)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.96 E-value=3.1e-06 Score=74.92 Aligned_cols=124 Identities=15% Similarity=0.143 Sum_probs=84.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
.+.|++.++++.|++.|+++.++||.....+..+.+.+||..-. . .++..... ....-.|+
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f-~-~~~~~~~~-----------------~~~kp~p~ 155 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLF-S-EMLGGQSL-----------------PEIKPHPA 155 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC-S-EEECTTTS-----------------SSCTTSSH
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhc-c-cccccccc-----------------ccccccch
Confidence 46799999999999999999999999999999999999985211 0 01110000 01112233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCe-eEEecC----chHHHHhhcchhccCCChhHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVAD----ATDAARSAADIVLTEPGLNVIITAV 310 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~v-GIa~~~----a~~~a~~aAD~vl~~~~~~~i~~~i 310 (447)
--..+.+.++-....++||||+.+|+.+-+.||+ .|.+.. ..+.....+|+++. ++..+..+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~--~l~dL~~ii 223 (224)
T d2hsza1 156 PFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFD--DFADILKIT 223 (224)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEES--SGGGGGGGT
T ss_pred hhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEEC--CHHHHHHhh
Confidence 3445566666667789999999999999999997 455532 22233445788874 476665543
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.91 E-value=8.7e-06 Score=71.88 Aligned_cols=118 Identities=16% Similarity=0.202 Sum_probs=80.7
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhh
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 246 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~ 246 (447)
+.|++.++|+.|++.|+++.++|+.....+..+.+.+|+..- + ..++.+.+. ....-.|+-
T Consensus 89 ~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~-F-~~i~~~~~~-----------------~~~Kp~~~~ 149 (218)
T d1te2a_ 89 LLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDS-F-DALASAEKL-----------------PYSKPHPQV 149 (218)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG-C-SEEEECTTS-----------------SCCTTSTHH
T ss_pred ccchHHHHHHHhhhcccccccccccccccccccccccccccc-c-ccccccccc-----------------ccchhhHHH
Confidence 569999999999999999999999999999999999999521 1 111111111 012222333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeE-EecC---chHHHHhhcchhccCCChhH
Q 013242 247 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI-AVAD---ATDAARSAADIVLTEPGLNV 305 (447)
Q Consensus 247 K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGI-a~~~---a~~~a~~aAD~vl~~~~~~~ 305 (447)
-..+++.++-....++||||+.+|+.|-+.||+.. ++.. ..+.....||+++.+ +..
T Consensus 150 ~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~--l~e 210 (218)
T d1te2a_ 150 YLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSS--LTE 210 (218)
T ss_dssp HHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSC--GGG
T ss_pred HHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECC--hhh
Confidence 44566667666778999999999999999999753 3322 122223457877743 554
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.68 E-value=7.6e-06 Score=71.84 Aligned_cols=120 Identities=10% Similarity=0.053 Sum_probs=80.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.+++.+.++.++..| ++.++|+.....+..+.+.+|+.... ..++.+. -.....|+
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~f--d~v~~~~-------------------~~~~~~p~ 141 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFF--DGIYGSS-------------------PEAPHKAD 141 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEEC-------------------SSCCSHHH
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhcccccc--ccccccc-------------------cccccccc
Confidence 46789999999999775 89999999999999999999985311 0111100 01122233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCe-eEEec---CchH-HHHhhcchhccCCChhHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVA---DATD-AARSAADIVLTEPGLNVIITA 309 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~v-GIa~~---~a~~-~a~~aAD~vl~~~~~~~i~~~ 309 (447)
....+++.++-....++||||+.||+.|-+.||+ .|++. ...+ .....+|+++.+ +..+...
T Consensus 142 ~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~--l~el~~~ 208 (210)
T d2ah5a1 142 VIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHK--PLEVLAY 208 (210)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESS--TTHHHHH
T ss_pred ccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECC--HHHHHHH
Confidence 3444555555556679999999999999999998 45553 2223 333448998844 6666544
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.64 E-value=9.6e-06 Score=72.15 Aligned_cols=52 Identities=17% Similarity=0.372 Sum_probs=38.1
Q ss_pred hHHHHHHHHhh-cCCEEEEEcC----CCCchhHHhhcC-eeEEecCchHHHHhhcchhc
Q 013242 246 HKYEIVKHLQA-RNHICGMIGN----GVNDAPALKKAD-IGIAVADATDAARSAADIVL 298 (447)
Q Consensus 246 ~K~~iV~~lq~-~g~~v~~iGD----g~ND~~al~~A~-vGIa~~~a~~~a~~aAD~vl 298 (447)
+|...++.|.. ....|+++|| |.||.+||+.|+ .|++++++ +.++..++.++
T Consensus 185 sKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~-~~~~~~~~~l~ 242 (243)
T d2amya1 185 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAP-EDTRRICELLF 242 (243)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSH-HHHHHHHHHHC
T ss_pred CHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCH-HHHHHHHHHHh
Confidence 57777777765 3568999999 779999999998 68888775 45565666543
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=97.63 E-value=9.5e-05 Score=63.78 Aligned_cols=134 Identities=18% Similarity=0.176 Sum_probs=80.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHH---------------HHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhH
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAI---------------AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 231 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~---------------a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (447)
+-|++.++|+.|+++|++++++|...... ........|+... ...+.....+ .....
T Consensus 28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~cp~~p~-----~~~~~ 99 (182)
T d2gmwa1 28 FIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLD---GIYYCPHHPQ-----GSVEE 99 (182)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCS---EEEEECCBTT-----CSSGG
T ss_pred ECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhccccc---ceeecccccc-----ccccc
Confidence 45899999999999999999999876311 1112222233211 0000000000 00000
Q ss_pred HHhhccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee--EEecC---chHHHHhhcchhccCCChhHH
Q 013242 232 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG--IAVAD---ATDAARSAADIVLTEPGLNVI 306 (447)
Q Consensus 232 ~~~~~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG--Ia~~~---a~~~a~~aAD~vl~~~~~~~i 306 (447)
......+..-.|.--..+++.+.-....++||||..+|+.|=+.|+++ +.+.. ..+.....||+|+ +++..+
T Consensus 100 -~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~--~~l~dl 176 (182)
T d2gmwa1 100 -FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLADL 176 (182)
T ss_dssp -GBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGGH
T ss_pred -ccccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEE--CCHHHH
Confidence 000011233345555667777776677799999999999999999985 44432 3455667799998 558888
Q ss_pred HHHHH
Q 013242 307 ITAVL 311 (447)
Q Consensus 307 ~~~i~ 311 (447)
.++|+
T Consensus 177 ~~~ik 181 (182)
T d2gmwa1 177 PQAIK 181 (182)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 88775
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.50 E-value=0.00013 Score=64.75 Aligned_cols=124 Identities=17% Similarity=0.184 Sum_probs=82.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++++.|+ .|+++.++|+........+.+.+|+..- +. .++... + .....-.|+
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~-fd-~i~~s~------------~-----~~~~KP~~~ 159 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDL-FD-SITTSE------------E-----AGFFKPHPR 159 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGG-CS-EEEEHH------------H-----HTBCTTSHH
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhcccccccc-cc-cccccc------------c-----ccccchhhH
Confidence 46799999999996 5899999999999999999999998521 10 000000 0 001111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCC-CCchhHHhhcCeeEE-e--cCchHHHHhhcchhccCCChhHHHHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNG-VNDAPALKKADIGIA-V--ADATDAARSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg-~ND~~al~~A~vGIa-~--~~a~~~a~~aAD~vl~~~~~~~i~~~i~ 311 (447)
-=..+++.+.-....|+||||. .+|+.+-+.||+-.. + ++........+|+++.+ ++.+..+|.
T Consensus 160 ~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~--l~el~~~l~ 227 (230)
T d1x42a1 160 IFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSD--LREVIKIVD 227 (230)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEESS--TTHHHHHHH
T ss_pred HHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEECC--HHHHHHHHH
Confidence 2234455565556679999997 589999999998633 2 23333445578998844 888887776
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.46 E-value=4.7e-05 Score=66.36 Aligned_cols=101 Identities=16% Similarity=0.116 Sum_probs=69.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++.|++.++++.|++.|+++.++|+... .+..+.+++|+..- . ..++ +.+. .....-.|+
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~-f-~~i~-~s~~----------------~~~~Kp~~~ 141 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESY-F-TEIL-TSQS----------------GFVRKPSPE 141 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGG-E-EEEE-CGGG----------------CCCCTTSSH
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccc-c-cccc-cccc----------------ccccchhHH
Confidence 3579999999999999999999998665 55678899998521 0 0000 0000 001122344
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee-EEecCc
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADA 286 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG-Ia~~~a 286 (447)
--..+++.+.-....|+||||+.+|+.+-+.||+. |++..+
T Consensus 142 ~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~ 183 (204)
T d2go7a1 142 AATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLES 183 (204)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCC
T ss_pred HHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEcCC
Confidence 44556666666667899999999999999999985 445444
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.43 E-value=7.8e-05 Score=63.12 Aligned_cols=95 Identities=12% Similarity=0.107 Sum_probs=65.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCc-HHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccCh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQ-LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 244 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~-~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p 244 (447)
++.|++.++|+.|++.|+++.++|+.+ ...+..+.+.+++.... ... .....-.|
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~--~~~----------------------~~~~kp~~ 101 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYF--IQR----------------------EIYPGSKV 101 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGC--SEE----------------------EESSSCHH
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccc--eee----------------------ecccCCCh
Confidence 478999999999999999999999765 45666677777763110 000 00111123
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee-EEec
Q 013242 245 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVA 284 (447)
Q Consensus 245 ~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG-Ia~~ 284 (447)
+.-..+++.+.-....++||||..+|+.+-+.||+- |.+.
T Consensus 102 ~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~i~v~ 142 (164)
T d1u7pa_ 102 THFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIR 142 (164)
T ss_dssp HHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECS
T ss_pred HHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEEEEEC
Confidence 333455666666677899999999999999999984 3443
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=97.38 E-value=0.0002 Score=63.31 Aligned_cols=117 Identities=15% Similarity=0.078 Sum_probs=78.5
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccCh
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 244 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p 244 (447)
-.+.|++.+++++|++.|+++.++|+............+|+..-. +...... + . .....-.|
T Consensus 126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~-~~~~~~~---d---------~-----~~~~KP~p 187 (253)
T d1zs9a1 126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDIL-ELVDGHF---D---------T-----KIGHKVES 187 (253)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCG-GGCSEEE---C---------G-----GGCCTTCH
T ss_pred cccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhh-hhcceee---c---------c-----ccccCCCc
Confidence 347899999999999999999999999999999999988875311 0000000 0 0 00112223
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEe----cCc-hHHHHhhcchhcc
Q 013242 245 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV----ADA-TDAARSAADIVLT 299 (447)
Q Consensus 245 ~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~----~~a-~~~a~~aAD~vl~ 299 (447)
+-=..+++.++-....|+||||..+|+.+-+.||+-..+ ++. .......++.++.
T Consensus 188 ~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~ 247 (253)
T d1zs9a1 188 ESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT 247 (253)
T ss_dssp HHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES
T ss_pred HHHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEEC
Confidence 333455566666667899999999999999999996444 232 2233445666664
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=97.17 E-value=4e-05 Score=67.04 Aligned_cols=118 Identities=13% Similarity=0.094 Sum_probs=77.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhh
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 246 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~ 246 (447)
+.|++.++++.|++ ++++.++|+.....+..+.+++|+.... ..++.+.+. ....-.|+-
T Consensus 83 ~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~p~~ 142 (207)
T d2hdoa1 83 LYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRM--AVTISADDT-----------------PKRKPDPLP 142 (207)
T ss_dssp ECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGE--EEEECGGGS-----------------SCCTTSSHH
T ss_pred cccchhhhhhhhcc-cccccccccccccccccccccccccccc--ccccccccc-----------------ccchhhhhh
Confidence 56899999999975 7999999999999999999999885210 001100000 011122333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEe---cCchHHHHhhcchhccCCChhHH
Q 013242 247 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV---ADATDAARSAADIVLTEPGLNVI 306 (447)
Q Consensus 247 K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~---~~a~~~a~~aAD~vl~~~~~~~i 306 (447)
-..+++.++-....|+||||+.+|+.+-+.||+.... |..+......+|.++. ++..|
T Consensus 143 ~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i~--~l~dl 203 (207)
T d2hdoa1 143 LLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQ--KPLDI 203 (207)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEES--SGGGG
T ss_pred hcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEeC--CHHHH
Confidence 4555666655556799999999999999999998554 2233333445677763 35444
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.12 E-value=0.00065 Score=58.11 Aligned_cols=108 Identities=14% Similarity=0.141 Sum_probs=69.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccch-hccCh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF-AGVFP 244 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-a~~~p 244 (447)
++.|++.+.|+.|++.|+++.++|+...... .+.+.+|+... + ..++.+. .+. ..-.|
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~-f-d~i~~~~------------------~~~~~KP~p 137 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAY-F-TEVVTSS------------------SGFKRKPNP 137 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGG-E-EEEECGG------------------GCCCCTTSC
T ss_pred cccchhHHHHHHHHhhhccccccccCccchh-hhhhhhccccc-c-ccccccc------------------cccccCCCH
Confidence 4679999999999999999999998766554 56788887521 1 0111110 000 11112
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEEecCchHHHHhhcch
Q 013242 245 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADI 296 (447)
Q Consensus 245 ~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa~~~a~~~a~~aAD~ 296 (447)
+--..+.+.++- ..+++|||..+|+.+-+.||+-...-+.....++..|+
T Consensus 138 ~~~~~~~~~~~~--~~~l~vgDs~~Di~aA~~aG~~~i~v~~~~~~~~~~d~ 187 (187)
T d2fi1a1 138 ESMLYLREKYQI--SSGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLDI 187 (187)
T ss_dssp HHHHHHHHHTTC--SSEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHTC
T ss_pred HHHHHHHHHcCC--CCeEEEeCCHHHHHHHHHcCCEEEEECCCCChHhhcCC
Confidence 222334444442 34899999999999999999885444555666665553
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.07 E-value=0.00057 Score=60.83 Aligned_cols=124 Identities=10% Similarity=0.109 Sum_probs=81.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhh
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 246 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~ 246 (447)
+.|++.++++.|++ |+++.++|+..........+.+|+..- +. .++...+. ....-.|+-
T Consensus 110 ~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~-fd-~i~~s~~~-----------------~~~KP~p~~ 169 (247)
T d2gfha1 110 LADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSY-FD-AIVIGGEQ-----------------KEEKPAPSI 169 (247)
T ss_dssp CCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGG-CS-EEEEGGGS-----------------SSCTTCHHH
T ss_pred cCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhcccccc-cc-cccccccc-----------------ccchhhhhh
Confidence 67999999999985 899999999999999999999998521 11 11111000 011112222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCC-CchhHHhhcCee-EEecC----chHHHHhhcchhccCCChhHHHHHHHH
Q 013242 247 KYEIVKHLQARNHICGMIGNGV-NDAPALKKADIG-IAVAD----ATDAARSAADIVLTEPGLNVIITAVLI 312 (447)
Q Consensus 247 K~~iV~~lq~~g~~v~~iGDg~-ND~~al~~A~vG-Ia~~~----a~~~a~~aAD~vl~~~~~~~i~~~i~~ 312 (447)
=..+++.+.-....++||||.. +|+.+-+.||+. +.+-+ ........+|+++. ++..+..+|+.
T Consensus 170 ~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~--~l~eL~~ll~~ 239 (247)
T d2gfha1 170 FYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVS--SVLELPALLQS 239 (247)
T ss_dssp HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEES--SGGGHHHHHHH
T ss_pred HHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEEC--CHHHHHHHHHH
Confidence 2345555555556799999996 899999999996 54421 11222334788884 48888777764
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=96.92 E-value=0.00017 Score=59.56 Aligned_cols=106 Identities=13% Similarity=0.073 Sum_probs=60.1
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccC
Q 013242 164 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 243 (447)
Q Consensus 164 ~d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 243 (447)
.+.+.|++.+.++.|++.|++++++||++......+.+.+..-.. + .................--.+-.
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~--~---------~~~~~~~~~~~~~~~~~~~~~~d 102 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRK--W---------VEDIAGVPLVMQCQREQGDTRKD 102 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHH--H---------HHHTTCCCCSEEEECCTTCCSCH
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhh--h---------hhhcCCCcEEEeecccccccCCc
Confidence 578899999999999999999999999874221111111100000 0 00000000000000000001112
Q ss_pred hhhHHHHHHHHhhcCC-EEEEEcCCCCchhHHhhcCee
Q 013242 244 PEHKYEIVKHLQARNH-ICGMIGNGVNDAPALKKADIG 280 (447)
Q Consensus 244 p~~K~~iV~~lq~~g~-~v~~iGDg~ND~~al~~A~vG 280 (447)
+.-|..+.+.+...+. .++|+||...|+.|.+.+|+-
T Consensus 103 ~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~ 140 (149)
T d1ltqa1 103 DVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 140 (149)
T ss_dssp HHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred hHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCc
Confidence 3457777777766544 568899999999999999986
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=96.86 E-value=0.00058 Score=59.88 Aligned_cols=91 Identities=16% Similarity=0.241 Sum_probs=64.7
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcH----HHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhcc
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQL----AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 242 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~----~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~ 242 (447)
+.|++.+.++.+++.|++|+.+||+.. .++..+-+.+|+.........+.+.+.
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~~---------------------- 144 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKP---------------------- 144 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCCT----------------------
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCCC----------------------
Confidence 568999999999999999999999864 566777777998644333333322211
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCe-eEEe
Q 013242 243 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAV 283 (447)
Q Consensus 243 ~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~v-GIa~ 283 (447)
....|...|+. ...++++||..+|..+-..|++ +|-+
T Consensus 145 ~K~~rr~~Ik~----y~I~l~~GD~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 145 GQNTKSQWLQD----KNIRIFYGDSDNDITAARDVGARGIRI 182 (209)
T ss_dssp TCCCSHHHHHH----TTEEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred CchHHHHHHHH----cCeEEEecCCHHHHhHHHHcCCCceEe
Confidence 11234455543 4689999999999999999984 5655
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.79 E-value=0.0012 Score=58.39 Aligned_cols=145 Identities=19% Similarity=0.234 Sum_probs=90.7
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccC------Ccchh------hhhcCChhHHHh
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSG------QDRDE------SIVALPVDELIE 234 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~------~~~~~------~~~~~~~~~~~~ 234 (447)
+-||+.++++.+++. ...+++|-.-.+-+.++++.+|+..+.+...+-.. ...+. .+......++.+
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~eel~e 160 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELFR 160 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred ecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCceeecccccccccCCChHHHHHHHHHhhhccCccHHHHHH
Confidence 458999999999876 57788888888899999999999643221111000 00000 011111111111
Q ss_pred hcc-chh---------ccC---hhhHHHHHHHHhhc-C-CEEEEEcCCCCchhHHhhcCe--eEEec-CchHHHHhhcch
Q 013242 235 KAD-GFA---------GVF---PEHKYEIVKHLQAR-N-HICGMIGNGVNDAPALKKADI--GIAVA-DATDAARSAADI 296 (447)
Q Consensus 235 ~~~-v~a---------~~~---p~~K~~iV~~lq~~-g-~~v~~iGDg~ND~~al~~A~v--GIa~~-~a~~~a~~aAD~ 296 (447)
..+ .|. .+. -..|..+++..-.. + ...+++||++.|+.||+.|.= |+|++ ||.+-+-..||+
T Consensus 161 ~~d~~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Yal~eA~V 240 (308)
T d1y8aa1 161 KLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYALKHADV 240 (308)
T ss_dssp HHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHHHHTTCSE
T ss_pred HHHHHhccchHhhHHhhhcccCCchhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecCccccccccce
Confidence 100 111 111 23466665544332 1 234889999999999998854 77777 888888889999
Q ss_pred hccCCChhHHHHHHHH
Q 013242 297 VLTEPGLNVIITAVLI 312 (447)
Q Consensus 297 vl~~~~~~~i~~~i~~ 312 (447)
++.+++...+..++..
T Consensus 241 aiiS~~~~a~~~i~dl 256 (308)
T d1y8aa1 241 VIISPTAMSEAKVIEL 256 (308)
T ss_dssp EEECSSTHHHHHHHHH
T ss_pred EEeccchhHHHHHHHH
Confidence 9999998888777764
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=96.75 E-value=0.001 Score=58.09 Aligned_cols=100 Identities=7% Similarity=0.018 Sum_probs=66.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccCh
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 244 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p 244 (447)
.++-|++.+.++.|++.|+++.++|+... +....+.+|+... .+ .++.+.+. ....-.|
T Consensus 90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~-f~-~i~~~~~~-----------------~~~KP~~ 148 (221)
T d1o08a_ 90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGY-FD-AIADPAEV-----------------AASKPAP 148 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGG-CS-EECCTTTS-----------------SSCTTST
T ss_pred ccccCCceeccccccccccceEEEeecch--hhHHHHhhccccc-cc-cccccccc-----------------cccccCh
Confidence 34678999999999999999999999765 4677888888521 11 11111000 0111222
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCe-eEEecC
Q 013242 245 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVAD 285 (447)
Q Consensus 245 ~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~v-GIa~~~ 285 (447)
+-=..+.+.++-....|+||||..+|+.+-+.||+ .|+++.
T Consensus 149 ~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~ 190 (221)
T d1o08a_ 149 DIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGR 190 (221)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESC
T ss_pred HHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEECC
Confidence 22234555555556679999999999999999997 456654
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=96.63 E-value=0.00028 Score=63.74 Aligned_cols=37 Identities=19% Similarity=0.279 Sum_probs=29.7
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHh
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL 203 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~l 203 (447)
+=|++.++|+.|++.|++++++|+....+...+++++
T Consensus 19 ~i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 19 PIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp ECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred cCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 3478999999999999999999987766666655544
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=96.47 E-value=0.0017 Score=57.08 Aligned_cols=109 Identities=18% Similarity=0.095 Sum_probs=61.3
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcH--------H-------HHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhH
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQL--------A-------IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 231 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~--------~-------~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (447)
+-|++.++|+.|+++|+++.++|...- . ......+..|+.-..+ +............
T Consensus 49 l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~~~----~~~~~~~~~~~~~---- 120 (209)
T d2o2xa1 49 LRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMV----LACAYHEAGVGPL---- 120 (209)
T ss_dssp BCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEE----EEECCCTTCCSTT----
T ss_pred ecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccccceE----EEecccccccccc----
Confidence 569999999999999999999996321 1 1122233444321110 0000000000000
Q ss_pred HHhhccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCe-eEEec
Q 013242 232 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVA 284 (447)
Q Consensus 232 ~~~~~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~v-GIa~~ 284 (447)
......+..-.|.--..+++.+.-....++||||..+|+.+-+.||+ +|.+.
T Consensus 121 -~~~~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~ 173 (209)
T d2o2xa1 121 -AIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLV 173 (209)
T ss_dssp -CCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEE
T ss_pred -cccccccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEe
Confidence 00000112223444455666666566679999999999999999999 56664
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=96.38 E-value=0.0016 Score=56.46 Aligned_cols=122 Identities=10% Similarity=0.098 Sum_probs=82.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
.+.+++.++++.+++.|+++.++|+........+.+..++..-. ..++...+ .....-.|+
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~f--d~~~~s~~-----------------~~~~KP~p~ 153 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF--DHLLSVDP-----------------VQVYKPDNR 153 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEESGG-----------------GTCCTTSHH
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccc--cceeeeee-----------------eeccccHHH
Confidence 35689999999999999999999999999999888888874210 00111000 001122233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeEE-ec---CchHHHHhhcchhccCCChhHHHH
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-VA---DATDAARSAADIVLTEPGLNVIIT 308 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGIa-~~---~a~~~a~~aAD~vl~~~~~~~i~~ 308 (447)
-=..+++.+.-....|+||||..+|+.+-+.||+-.+ +. ...+.....+|+++ +++..+.+
T Consensus 154 ~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i--~~l~el~~ 218 (220)
T d1zrna_ 154 VYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVE 218 (220)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHT
T ss_pred HHHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEE--CCHHHHHh
Confidence 3345566666666789999999999999999998744 32 22223334578887 44776654
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.30 E-value=0.0032 Score=54.51 Aligned_cols=107 Identities=9% Similarity=0.049 Sum_probs=68.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCc----HHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhcc
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQ----LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 242 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~----~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~ 242 (447)
+.|++.+.+..|++.|+++.++|+.. ...........|+..- . ..++.+ ++ .....-
T Consensus 98 ~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~-f-d~i~~s------------~~-----~~~~KP 158 (222)
T d1cr6a1 98 INRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQH-F-DFLIES------------CQ-----VGMIKP 158 (222)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGG-C-SEEEEH------------HH-----HSCCTT
T ss_pred CCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhh-h-ceeeeh------------hh-----ccCCCC
Confidence 67999999999999999999999633 2334444555555310 0 000000 00 001222
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCe-eEEecCchHHHHh
Q 013242 243 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVADATDAARS 292 (447)
Q Consensus 243 ~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~v-GIa~~~a~~~a~~ 292 (447)
.|+--..+++.++-....|+||||..+|+.+-+.||+ +|.+.++.+...+
T Consensus 159 ~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~~~e 209 (222)
T d1cr6a1 159 EPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVHNTASALRE 209 (222)
T ss_dssp CHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECCSSSHHHHH
T ss_pred ChHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEECCcchHHHH
Confidence 3444556677777777789999999999999999997 5666555544443
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.29 E-value=0.0026 Score=55.31 Aligned_cols=124 Identities=10% Similarity=0.098 Sum_probs=76.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChhh
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 246 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~~ 246 (447)
+.+++.+.+++|+ .+..++|+.....+..+.+++|+..-. ......+.... ...+.-.|+.
T Consensus 86 ~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f-~~~~~~~~~~~---------------~~~~KP~~~~ 146 (222)
T d2fdra1 86 IIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYF-APHIYSAKDLG---------------ADRVKPKPDI 146 (222)
T ss_dssp BCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGT-TTCEEEHHHHC---------------TTCCTTSSHH
T ss_pred hhhhHHHHhhhcc---ccceeeeecchhhhhhhhccccccccc-ceeeccccccc---------------ccccccCHHH
Confidence 6778888877665 456799999999999999999996321 01111000000 0011112222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee-EEecCch-------HHH-HhhcchhccCCChhHHHHHHH
Q 013242 247 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADAT-------DAA-RSAADIVLTEPGLNVIITAVL 311 (447)
Q Consensus 247 K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG-Ia~~~a~-------~~a-~~aAD~vl~~~~~~~i~~~i~ 311 (447)
=..+.+.+.-....++||||+.+|+.+-+.||+- |++..+. +.. ..-||+++.+ +..+..+|.
T Consensus 147 ~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~--l~eL~~ll~ 218 (222)
T d2fdra1 147 FLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISR--MQDLPAVIA 218 (222)
T ss_dssp HHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESC--GGGHHHHHH
T ss_pred HHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECC--HHHHHHHHH
Confidence 3445556665567899999999999999999974 4554321 222 2348999844 766665553
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=96.17 E-value=0.0044 Score=55.57 Aligned_cols=61 Identities=23% Similarity=0.297 Sum_probs=41.9
Q ss_pred HHHHHHHhhcCCEEEEEcCCC-CchhHHhhcCe-eEEecC--c-hHHHHh---hcchhccCCChhHHHHHH
Q 013242 248 YEIVKHLQARNHICGMIGNGV-NDAPALKKADI-GIAVAD--A-TDAARS---AADIVLTEPGLNVIITAV 310 (447)
Q Consensus 248 ~~iV~~lq~~g~~v~~iGDg~-ND~~al~~A~v-GIa~~~--a-~~~a~~---aAD~vl~~~~~~~i~~~i 310 (447)
..+.+.+.-....++||||+. +|+.+-+.||+ +|.|.. . ...... .+|+++ +++..+.++|
T Consensus 192 ~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii--~~l~eL~~~l 260 (261)
T d1vjra_ 192 DVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVF--KNLGELAKAV 260 (261)
T ss_dssp HHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEE--SSHHHHHHHH
T ss_pred HHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEE--CCHHHHHHHh
Confidence 445555655667899999996 69999999997 566632 2 222222 248888 4588887776
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=96.05 E-value=0.0027 Score=56.93 Aligned_cols=43 Identities=14% Similarity=0.128 Sum_probs=32.5
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcC---CcHHHHHHHHHHhCCC
Q 013242 164 FDPPIHDSAETIRRALSLGLGVKMITG---DQLAIAKETGRRLGMG 206 (447)
Q Consensus 164 ~d~~r~~~~~~I~~l~~~Gi~v~miTG---d~~~~a~~ia~~lGi~ 206 (447)
.+.+=|++.++|+.|+++|++++++|+ ..........+++|++
T Consensus 17 ~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~ 62 (250)
T d2c4na1 17 DNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp TTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred CCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccc
Confidence 344447899999999999999999985 4455555556677875
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=95.18 E-value=0.028 Score=48.90 Aligned_cols=94 Identities=11% Similarity=0.109 Sum_probs=64.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhccChh
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 245 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~p~ 245 (447)
++-+++.+++++|+ |+.+.++|+.+...+....+..|+..-. ..++.+.+. ....-.|+
T Consensus 93 ~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~f--d~v~~s~~~-----------------~~~KP~p~ 151 (245)
T d1qq5a_ 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF--DAVISVDAK-----------------RVFKPHPD 151 (245)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGG-----------------TCCTTSHH
T ss_pred ccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhccccccc--ccccccccc-----------------cccCccHH
Confidence 46688999999885 7889999999999999888888875211 111111100 01112233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCee
Q 013242 246 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 280 (447)
Q Consensus 246 ~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vG 280 (447)
-=..+++.++-+...|+||||+.+|+.+-+.||+-
T Consensus 152 ~f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~ 186 (245)
T d1qq5a_ 152 SYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFS 186 (245)
T ss_dssp HHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCE
T ss_pred HHHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCe
Confidence 22445566665666799999999999999999975
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.96 E-value=0.0087 Score=51.20 Aligned_cols=102 Identities=10% Similarity=0.029 Sum_probs=61.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHH----HHHHHHhCCCCCCCCcccccCCcchhhhhcCChhHHHhhccchhcc
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQLAIA----KETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 242 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a----~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~ 242 (447)
+.+++.+.+..|++.|++++++|+...... .......++..- + ..++.+. + .....-
T Consensus 100 ~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~-f-d~i~~s~------------~-----~~~~KP 160 (225)
T d1zd3a1 100 INRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMH-F-DFLIESC------------Q-----VGMVKP 160 (225)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTT-S-SEEEEHH------------H-----HTCCTT
T ss_pred CCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhh-c-cEEEecc------------c-----cccchh
Confidence 678999999999999999999997543322 222222232110 0 0000000 0 001112
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCe-eEEecCch
Q 013242 243 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVADAT 287 (447)
Q Consensus 243 ~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~v-GIa~~~a~ 287 (447)
.|+-=..+++.+.-....++||||...|+.+-+.+|+ +|.+.++.
T Consensus 161 ~~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~~ 206 (225)
T d1zd3a1 161 EPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDTD 206 (225)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSSHH
T ss_pred HHHHHHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEECCcc
Confidence 2333344556666555679999999999999999999 56665443
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=94.95 E-value=0.003 Score=53.00 Aligned_cols=99 Identities=10% Similarity=-0.034 Sum_probs=54.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCc--------HHHH-------HHHHHHhCCCCCCCCcccccCCcchhhhhcCChhH
Q 013242 167 PIHDSAETIRRALSLGLGVKMITGDQ--------LAIA-------KETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 231 (447)
Q Consensus 167 ~r~~~~~~I~~l~~~Gi~v~miTGd~--------~~~a-------~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (447)
+-|++.++|+.|++.|++++++|... .... .......|+.... ..+........
T Consensus 31 ~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~~~---i~~~~~~~~~~-------- 99 (161)
T d2fpwa1 31 FEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDE---VLICPHLPADE-------- 99 (161)
T ss_dssp BCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCEEE---EEEECCCGGGC--------
T ss_pred ECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccccce---eeecccccccc--------
Confidence 56899999999999999999999753 1111 2223333442100 00000000000
Q ss_pred HHhhccchhccChhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCeeE
Q 013242 232 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 281 (447)
Q Consensus 232 ~~~~~~v~a~~~p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~vGI 281 (447)
..+..-.|.-=.++++.+.-....++||||...|..|-+.||+--
T Consensus 100 -----~~~~KP~p~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~ 144 (161)
T d2fpwa1 100 -----CDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGING 144 (161)
T ss_dssp -----CSSSTTSSGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEE
T ss_pred -----ccccccccHHHHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeE
Confidence 001111222223344444444557999999999999999999873
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=94.39 E-value=0.024 Score=50.36 Aligned_cols=41 Identities=24% Similarity=0.250 Sum_probs=31.9
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCCC-chhHHhhcCe-eEEec
Q 013242 244 PEHKYEIVKHLQARNHICGMIGNGVN-DAPALKKADI-GIAVA 284 (447)
Q Consensus 244 p~~K~~iV~~lq~~g~~v~~iGDg~N-D~~al~~A~v-GIa~~ 284 (447)
|+--..+++.++.....|+||||..+ |+.+-+.||+ +|.|.
T Consensus 183 p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~ 225 (253)
T d1wvia_ 183 AVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVT 225 (253)
T ss_dssp HHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEES
T ss_pred cccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEEC
Confidence 44445566677666678999999976 9999999999 67774
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=92.67 E-value=0.0044 Score=51.80 Aligned_cols=102 Identities=9% Similarity=0.040 Sum_probs=60.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHh-CCCCCCCCcccccCCcchhhhhcCChhHHHhh-ccchhccC
Q 013242 166 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL-GMGTNMYPSSALSGQDRDESIVALPVDELIEK-ADGFAGVF 243 (447)
Q Consensus 166 ~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~ia~~l-Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~a~~~ 243 (447)
++.+++.+.+..++..|+++.++|+.+...+....... |+. ... +.++.. ......-.
T Consensus 84 ~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~---------------~~f-----d~v~~s~~~~~~Kp~ 143 (197)
T d2b0ca1 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIR---------------DAA-----DHIYLSQDLGMRKPE 143 (197)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHH---------------HHC-----SEEEEHHHHTCCTTC
T ss_pred ccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccch---------------hhc-----cceeecccccccccc
Confidence 36789999999999999999999975543222111111 110 000 000000 00011122
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCCCchhHHhhcCe-eEEecCch
Q 013242 244 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVADAT 287 (447)
Q Consensus 244 p~~K~~iV~~lq~~g~~v~~iGDg~ND~~al~~A~v-GIa~~~a~ 287 (447)
|+-=..+++.++-....|+||||..+|+.+-+.||+ +|.+.+..
T Consensus 144 ~~~~~~~~~~~~~~~~~~l~vgDs~~di~~A~~aG~~ti~v~~~~ 188 (197)
T d2b0ca1 144 ARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKT 188 (197)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTT
T ss_pred hHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHcCCEEEEECCCC
Confidence 222234455555556789999999999999999998 66665544
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=80.98 E-value=1.1 Score=34.71 Aligned_cols=42 Identities=14% Similarity=0.045 Sum_probs=33.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHH---HHHHhCCC
Q 013242 165 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKE---TGRRLGMG 206 (447)
Q Consensus 165 d~~r~~~~~~I~~l~~~Gi~v~miTGd~~~~a~~---ia~~lGi~ 206 (447)
++|.+++.+.|+.|++.|.++++.|++....-.. -.++-|+.
T Consensus 20 ~kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~~~i~ 64 (122)
T d2obba1 20 GEEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 64 (122)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred ccccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHHcCCC
Confidence 4578999999999999999999999998755433 34444553
|