Citrus Sinensis ID: 013259

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------
Protein Sequence
MRTKMKGRISRIGSYAISSSIRDHQQQPCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTVVFSPIRMPCSRLS
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccEEEEccccccHHcccccccccccccccccccHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHccccEEEEccccccccEEEEEEEccccEEEEEEEEEccccccHHHHHHccEEEEccccccccccccEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHcccccccEEEEcccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEccHHHHHHHHHccccccccccHHHHHHHHHHHcccccccccHHHHHHHHHHcccccccccccccccccccccccccEEEEEEEccEEcccHHHcccccccccccccccEEEEEEcccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccEccccccccccccccccccccEEEEEHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEEEEEccHHHHHHHHHHHHHcccEEEEEEccccccccEEEEEEcccEEEEEEEEEEEcccccHHHHHHHHHHHcccccccccccccEEEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHcccccccEEEEcccccccccHHHHHHHHccccccHHHHccccccccccEEEcccccccEEEEEEEEEEccccccccccccHHHHHHHHHHHHHHHHcccHccHHHHEcccccccEEEHHHHHHHHHHcccccccccccHHHHHHHHHHHccccccEccHHHHHHHHHcccccHcHHHccccccccccccccHccccEEEEEEEEccHHHHcccccccccccccccEEEEEcccEccccccc
Coil and Loop (DISEMBL)
MRTKMKGRISRIGSYaisssirdhqqqpcitcttfNILAPIYKrlsnedqncresdcrayWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFklartnnrgdglLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVElidpfsqcrngdlRQEILIVNThllfphdsslslVRLHQVYKILQHVESYqkehnlkpipiilcgdwngskrghVYKFLRsqgfvssydtahqytdadahkwvshrnhrgnicgvdfiwllnpNKYRKLLKASWSEAVFGMFKCLLRRASLTETDAFAFlkadndgdyitySGFCEALEQLNLTghkhgladeetkDLWVQAdidgngvvdYKEFQQRIWKTTWSdqrndlndededgfvkSSLEQTIGfsvknavlfppevekgrwpenyslsdharltvvfspirmpcsrls
Flexible Loop (DISEMBL)
mrtkmkgrisrIGSYAisssirdhqqqPCITCTTFNILAPIYKrlsnedqncreSDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKlartnnrgdglLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTtwsdqrndlndEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPenyslsdharltvvfspirmpcsrls
Low Complexity Region (SEG)
MRTKMKGRISRIGSYAISSSIRDHQQQPCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTVVFSPIRMPCSRLS
Disordered region (IsUnstruct)
**************YAI***IRDHQQQPCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTTWSD*************V**SLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTVVFSPI********
Disordered Region (DISOPRED)
******************************TCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRAS*T*TDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTTWS*********************TIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTVVFSPIRMPCS***
Disordered Region (DISEMBL)
*********SRIGSYAISSSIRDHQQQPCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTVVFSPIRMPCSRLS
Disordered Region (DISPRO)
****************I*SS****QQQPCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTTWSDQR****************EQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTVVFSPIRMPC****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRTKMKGRISRIGSYAISSSIRDHQQQPCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTVVFSPIRMPCSRLS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	447	2.2.26 [Sep-21-2011]
O81916	484	Uncharacterized calcium-b	no	no	0.955	0.882	0.633	1e-164
Q9LS39	448	Carbon catabolite repress	no	no	0.353	0.352	0.295	4e-09
Q8W0Z9	602	Carbon catabolite repress	no	no	0.333	0.247	0.282	1e-07
Q8VYU4	754	Carbon catabolite repress	no	no	0.366	0.217	0.270	3e-07
Q0WKY2	454	Carbon catabolite repress	no	no	0.366	0.361	0.270	7e-07
Q6BMM5	831	Glucose-repressible alcoh	yes	no	0.465	0.250	0.231	2e-05
P79942	388	Nocturnin OS=Xenopus laev	N/A	no	0.436	0.502	0.238	2e-05
Q5RGT6	569	Protein angel homolog 2 O	yes	no	0.362	0.284	0.25	3e-05
Q5VTE6	544	Protein angel homolog 2 O	yes	no	0.483	0.397	0.221	3e-05
Q24239	354	Protein angel OS=Drosophi	yes	no	0.362	0.457	0.262	6e-05

>sp|O81916|YC22_ARATH Uncharacterized calcium-binding protein At1g02270 OS=Arabidopsis thaliana GN=At1g02270 PE=2 SV=2

 Score =  578 bits (1490), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 271/428 (63%), Positives = 338/428 (78%), Gaps = 1/428 (0%)

Query: 17  ISSSIRDHQQQPCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYER 76
           ++S++     +  I+CTTFNILAPIYKR+  ++ + RESD R  W  RNQRILD LL++R
Sbjct: 58  LNSNLASSMVESNISCTTFNILAPIYKRVDQKNHSTRESDFRTLWLARNQRILDLLLHQR 117

Query: 77  SSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRD 136
           SS+ICLQE WVGNEELV+MY  +LS +GY  ++LARTN+RGDGLLTA+HKD+F+VVNYR+
Sbjct: 118 SSVICLQEVWVGNEELVNMYHHQLSSSGYTIYQLARTNSRGDGLLTAIHKDHFKVVNYRE 177

Query: 137 LLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKI 196
           LLFNDFGDRVAQLLHV+ + PF      D++QE++IVNTHLLFPHDSSLS+VRLHQVYKI
Sbjct: 178 LLFNDFGDRVAQLLHVKTVIPFPLNGKQDVQQEVIIVNTHLLFPHDSSLSIVRLHQVYKI 237

Query: 197 LQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWV 256
           L+++E+YQKE+ L  +PIILCGDWNGSKRGHVYKFLRSQGF+SSYD AHQYTD+DAH+WV
Sbjct: 238 LEYLEAYQKENKLNHMPIILCGDWNGSKRGHVYKFLRSQGFISSYDDAHQYTDSDAHRWV 297

Query: 257 SHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRASLTETDAFAFLKAD 316
           SHRNHRGNICGVDFIWL NP+  RK L+ SW EAVF + K  L +AS+ E DAF FL A 
Sbjct: 298 SHRNHRGNICGVDFIWLCNPSDSRKPLRTSWVEAVFSIIKYQLHKASIAEDDAFTFLGAK 357

Query: 317 NDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTT 376
           N  D +TYS FC AL+++NLTG  HGL+ EETK+LWV+AD+DGNGV DY+E  ++IW  T
Sbjct: 358 NHSDSLTYSDFCLALQKVNLTGIPHGLSFEETKELWVRADLDGNGVFDYEEL-KKIWNMT 416

Query: 377 WSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTVVF 436
             +Q  +  +   +   +   ++ IG  V  A+LFP E EKG WPENY++SDHA LTV F
Sbjct: 417 MVNQPGNCKESVMESKKEEGEDEAIGLKVNKAILFPQEAEKGLWPENYNISDHACLTVQF 476

Query: 437 SPIRMPCS 444
           SP++M CS
Sbjct: 477 SPVKMLCS 484

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LS39|CCR4C_ARATH Carbon catabolite repressor protein 4 homolog 3 OS=Arabidopsis thaliana GN=CCR4-3 PE=2 SV=2

 Score = 63.2 bits (152), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 18/176 (10%)

Query: 61  WFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGL 120
           W  R + I + L+     II +QE     ++  D++   +  AGY      RT +  DG 
Sbjct: 139 WGYRKRLICEELIRLNPDIISMQEV----DKYFDLFS-MMEKAGYAGSYKRRTGDNVDGC 193

Query: 121 LTAVHKDYFRVVNYRDLLFNDFG--DRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLL 178
                 D F V+   ++ F+ FG  D VAQL  +EL       R  +  ++IL+ N H+L
Sbjct: 194 AMFWKADRFGVLERENIEFSQFGMRDNVAQLAVLEL-------RKSNKSRKILLGNIHVL 246

Query: 179 FPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRS 234
           +  + +   V+L QV  +        K+     IPI+LCGD+N + +  +Y FL S
Sbjct: 247 Y--NPNQGDVKLGQVRSLCSKAHLLSKKWG--DIPIVLCGDFNSTPKSPLYNFLAS 298

Acts as catalytic component of the CCR4-NOT core complex, which in the nucleus seems to be a general transcription factor, and in the cytoplasm the major mRNA deadenylase involved in mRNA turnover.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 4

>sp|Q8W0Z9|CCR4A_ARATH Carbon catabolite repressor protein 4 homolog 1 OS=Arabidopsis thaliana GN=CCR4-1 PE=2 SV=1

 Score = 58.2 bits (139), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 83/195 (42%), Gaps = 46/195 (23%)

Query: 61  WFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTN------ 114
           W  R Q +L  ++  R+ I+CLQE  V N+   + +   L   GY      +TN      
Sbjct: 276 WTYRRQNLLREIVKYRADIVCLQE--VQNDHFEEFFLPELDKHGYQGLFKRKTNEVFIGN 333

Query: 115 -NRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNG--------- 164
            N  DG  T   +D F  V   ++ FN    + AQ L  E I P SQ +N          
Sbjct: 334 TNTIDGCATFFRRDRFSHVKKYEVEFN----KAAQSL-TEAIIPVSQKKNALNRLVKDNV 388

Query: 165 ------------------DLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKE 206
                               RQ + + NTH+  PH+  L  V+L QV+ +L+ +E     
Sbjct: 389 ALIVVLEAKFGSQAADNPGKRQLLCVANTHVNVPHE--LKDVKLWQVHTLLKGLEKIAAS 446

Query: 207 HNLKPIPIILCGDWN 221
            +   IP+++CGD+N
Sbjct: 447 AD---IPMLVCGDFN 458

Acts as catalytic component of the CCR4-NOT core complex, which in the nucleus seems to be a general transcription factor, and in the cytoplasm the major mRNA deadenylase involved in mRNA turnover.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 4

>sp|Q8VYU4|CCR4F_ARATH Carbon catabolite repressor protein 4 homolog 6 OS=Arabidopsis thaliana GN=CCR4-6 PE=2 SV=2

 Score = 56.6 bits (135), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 32/196 (16%)

Query: 58  RAYWFGRNQRILDW------LLYERS----SIICLQEFWVGNEELVDMYEKRLSDAGYVN 107
           R+ +F   + +L W      L++E S     I+CLQE     ++  D+ E+ +   GY  
Sbjct: 201 RSLYFHIPRNMLSWGWRKSKLVFELSLWSADIMCLQEV----DKFQDL-EEEMKHRGYSA 255

Query: 108 FKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFG--DRVAQLLHVELI---------D 156
               RT N  DG       + F++V+   + FN  G  D VAQ+  +E +          
Sbjct: 256 IWKMRTGNAVDGCAIFWRSNRFKLVHEESIQFNQLGLRDNVAQICVLETLLTSHTKENET 315

Query: 157 PFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIIL 216
           P  +   G  R  ++I N H+LF  +      +L QV  +L    +  K  +    PI+L
Sbjct: 316 PPPESSAGSHR--VVICNIHVLF--NPKRGDFKLGQVRTLLDKAHAVSKLWDD--APIVL 369

Query: 217 CGDWNGSKRGHVYKFL 232
           CGD+N + +  +Y F+
Sbjct: 370 CGDFNCTPKSPLYNFI 385

Acts as catalytic component of the CCR4-NOT core complex, which in the nucleus seems to be a general transcription factor, and in the cytoplasm the major mRNA deadenylase involved in mRNA turnover.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 4

>sp|Q0WKY2|CCR4E_ARATH Carbon catabolite repressor protein 4 homolog 5 OS=Arabidopsis thaliana GN=CCR4-5 PE=2 SV=2

 Score = 55.8 bits (133), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 17/181 (9%)

Query: 61  WFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGL 120
           W  R   I   +    +SI+CLQE      +  D  +  L + G+     +RT    DG 
Sbjct: 130 WSRRKHLICKEISRYNASILCLQEV-----DRFDDLDVLLKNRGFRGVHKSRTGEASDGC 184

Query: 121 LTAVHKDYFRVVNYRDLLFNDFGDR--VAQLLHVEL---IDPFSQ--CRNGDLRQEILIV 173
                ++ F +++++ + F+ FG R  VAQL  +E+    DP S+   R+ D R+ +++ 
Sbjct: 185 AIFWKENLFELLDHQHIEFDKFGMRNNVAQLCVLEMNCEEDPKSKLRVRSSDPRR-LVVG 243

Query: 174 NTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLR 233
           N H+LF  +     ++L QV   L+  ++Y+       IP+ + GD N + +  +Y F+ 
Sbjct: 244 NIHVLF--NPKRGDIKLGQVRLFLE--KAYKLSQEWGNIPVAIAGDLNSTPQSAIYDFIA 299

Query: 234 S 234
           S
Sbjct: 300 S 300

Acts as catalytic component of the CCR4-NOT core complex, which in the nucleus seems to be a general transcription factor, and in the cytoplasm the major mRNA deadenylase involved in mRNA turnover.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 4

>sp|Q6BMM5|CCR4_DEBHA Glucose-repressible alcohol dehydrogenase transcriptional effector OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=CCR4 PE=3 SV=2

 Score = 51.2 bits (121), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 116/263 (44%), Gaps = 55/263 (20%)

Query: 61  WFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGY--VNFKLART----- 113
           W  R   + + +L+ +S ++C+QE  V      + +   +   GY  V F   R+     
Sbjct: 510 WGFRRAALQEEVLHFKSDLVCMQE--VETRTFHEFWVPVMQGFGYKGVFFNKTRSKTMSE 567

Query: 114 --NNRGDGLLTAVHKDYFRVVNYRDLLFN-------------DFGDRVAQLLHVELIDPF 158
             + + DG  T    D F +++ ++  +N             D  +R     ++ LI  F
Sbjct: 568 SDSKKVDGCATFYKTDKFELLHKQNFEYNSVCMGSDKYKKTKDLFNRFMNKDNIALITYF 627

Query: 159 SQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHN-------LKP 211
           +  + G   ++IL VNTHL +  D + + V+  QV  +L+ + +  K+++       +K 
Sbjct: 628 NHIQTG---EKILFVNTHLHW--DPAFNDVKTLQVGILLEELRTIMKKYHHTNSIDEIKN 682

Query: 212 IPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAH-----QYTDAD---AHKWVSHRNHRG 263
             +++CGD+N +K   VY+ L S G VS+++        ++TD     + K  S  +H G
Sbjct: 683 ASMVICGDFNSTKENAVYQ-LFSTGAVSNHEDLEGRDYGKFTDEGFRHSFKLKSAYDHVG 741

Query: 264 NIC----------GVDFIWLLNP 276
            +            +D+IW   P
Sbjct: 742 ELPFTTISPAFTDAIDYIWYSTP 764

Acts as catalytic component of the CCR4-NOT core complex, which in the nucleus seems to be a general transcription factor, and in the cytoplasm the major mRNA deadenylase involved in mRNA turnover. Ccr4 has 3'-5' RNase activity with a strong preference for polyadenylated substrates and also low exonuclease activity towards single stranded DNA. Discovered because of its role in the control of ADH2 gene expression. It is required for the expression of genes involved in non-fermentative growth.

Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (taxid: 284592)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 4

>sp|P79942|NOCT_XENLA Nocturnin OS=Xenopus laevis GN=ccrn4l PE=2 SV=1

 Score = 50.8 bits (120), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 91/226 (40%), Gaps = 31/226 (13%)

Query: 61  WFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLART------- 113
           W  R   IL+ +L  +  ++CLQE     +   D ++  LS  GY    LA+        
Sbjct: 129 WEERKYLILEEILMYQPDVLCLQEV----DHYFDTFQPILSRLGYQCTFLAKPWSPCLDV 184

Query: 114 --NNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEIL 171
             NN  DG      +D F++VN   +       R  +   V + +    C  G   +++ 
Sbjct: 185 EHNNGPDGCALFFLQDRFQLVNSAKI---RLSARTLKTNQVAIAETLQCCETG---RQLC 238

Query: 172 IVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKF 231
              THL     +     RL Q   +L ++ES  +      +P+I+CGD+N      VYK 
Sbjct: 239 FAVTHL--KARTGWERFRLAQGSDLLDNLESITQGAT---VPLIICGDFNADPTEEVYKR 293

Query: 232 LRSQGFVSSYDTAHQYTDADAHKWVSHRNHR----GNIC-GVDFIW 272
             S     + ++A++    D      +   +    G  C  +D+IW
Sbjct: 294 FASSSL--NLNSAYKLLSEDGESEPPYTTWKIRTTGESCHTLDYIW 337

Component of the circadian clock or downstream effector of clock function. Exhibits a high amplitude circadian rhythm with maximal levels in early evening. In constant darkness or constant light, the amplitude of the rhythm decreases.

Xenopus laevis (taxid: 8355)

>sp|Q5RGT6|ANGE2_DANRE Protein angel homolog 2 OS=Danio rerio GN=angel2 PE=2 SV=1

 Score = 50.4 bits (119), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 18/180 (10%)

Query: 61  WFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGY-VNFKLARTNNRGDG 119
           W  R   I+  L    + I+CLQE  V  +      +  L   GY   FK  RT  + DG
Sbjct: 229 WRNRFPNIIKELEQYSADIMCLQE--VQEDHYKQQIKPSLESLGYHCEFK-RRTGLKPDG 285

Query: 120 LLTAVHKDYFRVVNYRDLLFNDFG------DRVAQLLHVELIDPFSQCRNGDLRQEILIV 173
                 ++ F +V+   + +   G      D V  ++ +  IDP     N      I + 
Sbjct: 286 CAVIFKRERFSLVSCHPVEYFRRGVPLMDRDNVGLIVLLRPIDPHVSLSN------ICVA 339

Query: 174 NTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLR 233
           NTHLL+  +     ++L Q+  +L  +    +  +    P++LCGD+N      +Y+F++
Sbjct: 340 NTHLLY--NPRRGDIKLAQLAMLLAEISRVSQLPDSSVCPVLLCGDFNSVPWSPLYRFIK 397

Danio rerio (taxid: 7955)

>sp|Q5VTE6|ANGE2_HUMAN Protein angel homolog 2 OS=Homo sapiens GN=ANGEL2 PE=2 SV=1

 Score = 50.4 bits (119), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/235 (22%), Positives = 97/235 (41%), Gaps = 19/235 (8%)

Query: 6   KGRISRIGSYAISSSIRDHQQQPCITCTTFNILAP-IYKRLSNEDQNCRESDCRAYWFGR 64
           K +   +G   +     D + +   +  ++NIL+  + +  S+  ++CR      +W  R
Sbjct: 143 KEKTKILGDKNVDPKCEDSENKFDFSVMSYNILSQDLLEDNSHLYRHCRRP--VLHWSFR 200

Query: 65  NQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLTAV 124
              IL  + +  + ++CLQE  V  +         L   GY      RT  + DG     
Sbjct: 201 FPNILKEIKHFDADVLCLQE--VQEDHYGAEIRPSLESLGYHCEYKMRTGRKPDGCAICF 258

Query: 125 HKDYFRV--VNYRDLLFNDFG----DRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLL 178
               F +  VN  +    D      D V  +L ++   P++ C        I + NTHLL
Sbjct: 259 KHSKFSLLSVNPVEFFRPDISLLDRDNVGLVLLLQPKIPYAAC------PAICVANTHLL 312

Query: 179 FPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLR 233
           +  +     ++L Q+  +L  + S   + +    PI++CGD+N      +Y F++
Sbjct: 313 Y--NPRRGDIKLTQLAMLLAEISSVAHQKDGSFCPIVMCGDFNSVPGSPLYSFIK 365

Homo sapiens (taxid: 9606)

>sp|Q24239|ANGEL_DROME Protein angel OS=Drosophila melanogaster GN=angel PE=1 SV=2

 Score = 49.3 bits (116), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 13/175 (7%)

Query: 61  WFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDA---GYVNFKLARTNNRG 117
           W  R Q +L  LL     I+CLQE    +  ++ +   R+ +     YV  K  +T  R 
Sbjct: 98  WQRRQQNLLRELLKLDPDILCLQEMQFDHLPVL-VQRLRMGNGKKLAYVYKK--KTGCRT 154

Query: 118 DGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHL 177
           DG         F +++++ +   D    +    +V L   F   +  + ++E ++  THL
Sbjct: 155 DGCAIVYDSSKFELLDHQAVELYDQAVALLNRDNVALFARFRFKKQQEQQKEFVVATTHL 214

Query: 178 LFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFL 232
           LF  ++  S VR  QV +IL+ ++S+  +      PI+L GD+N        +FL
Sbjct: 215 LF--NTKRSDVRCAQVERILEELQSFSTD-----TPIVLTGDFNSLPDSSPIEFL 262

Drosophila melanogaster (taxid: 7227)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	447
225455177	451	PREDICTED: uncharacterized calcium-bindi	0.988	0.980	0.809	0.0
147837828	445	hypothetical protein VITISV_034892 [Viti	0.988	0.993	0.809	0.0
297792837	437	calcium ion binding protein [Arabidopsis	0.970	0.993	0.823	0.0
145334817	436	calcium-binding endonuclease/exonuclease	0.970	0.995	0.819	0.0
224118484	451	predicted protein [Populus trichocarpa]	0.964	0.955	0.835	0.0
449438851	447	PREDICTED: uncharacterized calcium-bindi	0.982	0.982	0.808	0.0
259490803	436	calcium binding protein [Lepidium latifo	0.970	0.995	0.803	0.0
356518677	450	PREDICTED: uncharacterized calcium-bindi	0.993	0.986	0.791	0.0
255560600	456	carbon catabolite repressor protein, put	0.988	0.969	0.811	0.0
356507540	450	PREDICTED: uncharacterized calcium-bindi	0.988	0.982	0.792	0.0

>gi|225455177|ref|XP_002270121.1| PREDICTED: uncharacterized calcium-binding protein At1g02270 [Vitis vinifera] gi|302144002|emb|CBI23107.3| unnamed protein product [Vitis vinifera]

 Score =  763 bits (1969), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/442 (80%), Positives = 395/442 (89%)

Query: 6   KGRISRIGSYAISSSIRDHQQQPCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRN 65
           KGR+SRIG+YAI+SS+RDH   PCI+CTTFNILAPIYKRL++ED NCRESDCR YW  RN
Sbjct: 9   KGRVSRIGNYAIASSLRDHHHHPCISCTTFNILAPIYKRLNHEDTNCRESDCRTYWLSRN 68

Query: 66  QRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLTAVH 125
           + ILDWL+ ERSSIICLQEFWVGNEELV++YEKRL DAGY+NFKLARTNNRGDGLLT+VH
Sbjct: 69  RAILDWLIDERSSIICLQEFWVGNEELVNLYEKRLGDAGYINFKLARTNNRGDGLLTSVH 128

Query: 126 KDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSL 185
           KDYFRV+N+R LLFNDFGDRVAQLLHVEL+ PF  CR+ +  QEILIVNTHLLFPHDS+L
Sbjct: 129 KDYFRVLNHRALLFNDFGDRVAQLLHVELVAPFPHCRSSNTHQEILIVNTHLLFPHDSTL 188

Query: 186 SLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAH 245
            ++RL QVYKILQ+VESYQKE+ L P+PIILCGDWNGSK GHVYKFLRSQGFVSSYDTAH
Sbjct: 189 CIIRLQQVYKILQYVESYQKENKLNPMPIILCGDWNGSKSGHVYKFLRSQGFVSSYDTAH 248

Query: 246 QYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRASLT 305
           QYTDAD HKWVSHRNHRGNICGVDFIWLLNPN+YRKLLK SWSEAVFGMFK LLRRASLT
Sbjct: 249 QYTDADEHKWVSHRNHRGNICGVDFIWLLNPNRYRKLLKTSWSEAVFGMFKYLLRRASLT 308

Query: 306 ETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDY 365
           E DAFAFLKADN GD ITYSGFCEAL QLNLTGH HGL+DEE  DLWVQADIDGNGV+DY
Sbjct: 309 EDDAFAFLKADNHGDCITYSGFCEALRQLNLTGHCHGLSDEEINDLWVQADIDGNGVLDY 368

Query: 366 KEFQQRIWKTTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYS 425
           KEFQ+RIW  TWS QR++  +E  D  +K   EQ IGFSVKNAVLFP EVEKG WPENYS
Sbjct: 369 KEFQKRIWNPTWSQQRDENINEAWDEVMKGPKEQAIGFSVKNAVLFPSEVEKGMWPENYS 428

Query: 426 LSDHARLTVVFSPIRMPCSRLS 447
           LSDHARLTVVFSP+RMPC++++
Sbjct: 429 LSDHARLTVVFSPVRMPCAQIT 450

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147837828|emb|CAN73791.1| hypothetical protein VITISV_034892 [Vitis vinifera]

 Score =  762 bits (1968), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/442 (80%), Positives = 395/442 (89%)

Query: 6   KGRISRIGSYAISSSIRDHQQQPCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRN 65
           KGR+SRIG+YAI+SS+RDH   PCI+CTTFNILAPIYKRL++ED NCRESDCR YW  RN
Sbjct: 3   KGRVSRIGNYAIASSLRDHHHHPCISCTTFNILAPIYKRLNHEDTNCRESDCRTYWLSRN 62

Query: 66  QRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLTAVH 125
           + ILDWL+ ERSSIICLQEFWVGNEELV++YEKRL DAGY+NFKLARTNNRGDGLLT+VH
Sbjct: 63  RAILDWLIDERSSIICLQEFWVGNEELVNLYEKRLGDAGYINFKLARTNNRGDGLLTSVH 122

Query: 126 KDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSL 185
           KDYFRV+N+R LLFNDFGDRVAQLLHVEL+ PF  CR+ +  QEILIVNTHLLFPHDS+L
Sbjct: 123 KDYFRVLNHRALLFNDFGDRVAQLLHVELVAPFPHCRSSNTHQEILIVNTHLLFPHDSTL 182

Query: 186 SLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAH 245
            ++RL QVYKILQ+VESYQKE+ L P+PIILCGDWNGSK GHVYKFLRSQGFVSSYDTAH
Sbjct: 183 CIIRLQQVYKILQYVESYQKENKLNPMPIILCGDWNGSKSGHVYKFLRSQGFVSSYDTAH 242

Query: 246 QYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRASLT 305
           QYTDAD HKWVSHRNHRGNICGVDFIWLLNPN+YRKLLK SWSEAVFGMFK LLRRASLT
Sbjct: 243 QYTDADEHKWVSHRNHRGNICGVDFIWLLNPNRYRKLLKTSWSEAVFGMFKYLLRRASLT 302

Query: 306 ETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDY 365
           E DAFAFLKADN GD ITYSGFCEAL QLNLTGH HGL+DEE  DLWVQADIDGNGV+DY
Sbjct: 303 EDDAFAFLKADNHGDCITYSGFCEALRQLNLTGHCHGLSDEEINDLWVQADIDGNGVLDY 362

Query: 366 KEFQQRIWKTTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYS 425
           KEFQ+RIW  TWS QR++  +E  D  +K   EQ IGFSVKNAVLFP EVEKG WPENYS
Sbjct: 363 KEFQKRIWNPTWSQQRDENINEAWDEVMKGPKEQAIGFSVKNAVLFPSEVEKGMWPENYS 422

Query: 426 LSDHARLTVVFSPIRMPCSRLS 447
           LSDHARLTVVFSP+RMPC++++
Sbjct: 423 LSDHARLTVVFSPVRMPCAQIT 444

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297792837|ref|XP_002864303.1| calcium ion binding protein [Arabidopsis lyrata subsp. lyrata] gi|297310138|gb|EFH40562.1| calcium ion binding protein [Arabidopsis lyrata subsp. lyrata]

 Score =  759 bits (1960), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/443 (82%), Positives = 398/443 (89%), Gaps = 9/443 (2%)

Query: 5   MKGRISRIGSYAISSSIRD-HQQQPCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFG 63
           MKGRIS+IGSYAISSSIRD HQQQPCI+CTTFNILAPIYKRLS++DQ+ RESD RAYW G
Sbjct: 1   MKGRISKIGSYAISSSIRDQHQQQPCISCTTFNILAPIYKRLSHKDQSLRESDNRAYWLG 60

Query: 64  RNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLTA 123
           RN RILDWLLYERSSIICLQEFWVGNEELV++YEKRL DAGY+++KL RTNNRGDGLLTA
Sbjct: 61  RNHRILDWLLYERSSIICLQEFWVGNEELVNLYEKRLGDAGYLSYKLGRTNNRGDGLLTA 120

Query: 124 VHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDS 183
           VHKDYFRVVN RDLLFND GDRVAQLLHVEL+ P+SQ    D  QE+LIVNTHLLFPHDS
Sbjct: 121 VHKDYFRVVNSRDLLFNDCGDRVAQLLHVELVPPYSQY---DAHQEVLIVNTHLLFPHDS 177

Query: 184 SLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDT 243
           +LS+VRL QVYKILQ+VESYQKE NL P+PIILCGDWNGSKRGHVYKFLRSQGFVSSYDT
Sbjct: 178 TLSIVRLQQVYKILQYVESYQKEVNLSPMPIILCGDWNGSKRGHVYKFLRSQGFVSSYDT 237

Query: 244 AHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRAS 303
           AH+YTD+DAHKWVSHRNHRGNIC VDFIWLLNPN+YRKLLK SWSEAVFGMF+ LLRRAS
Sbjct: 238 AHRYTDSDAHKWVSHRNHRGNICAVDFIWLLNPNRYRKLLKTSWSEAVFGMFRYLLRRAS 297

Query: 304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVV 363
           LT  DAFAFLK DNDGD+IT+ GFCE L QLNLTGH +GL  +E KDLW+QADIDGNG++
Sbjct: 298 LTAEDAFAFLKTDNDGDHITFMGFCETLRQLNLTGHCNGLTTKEIKDLWIQADIDGNGLL 357

Query: 364 DYKEFQQRIWKTTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPEN 423
           DYKEFQQRIW  TWS+QR     + EDG  K + EQT+GFSVKNAVLFPPEVEKG WPEN
Sbjct: 358 DYKEFQQRIWNQTWSEQR-----DAEDGEAKGNQEQTVGFSVKNAVLFPPEVEKGMWPEN 412

Query: 424 YSLSDHARLTVVFSPIRMPCSRL 446
           YSLSDHARLTVVFSPIRMPCS+L
Sbjct: 413 YSLSDHARLTVVFSPIRMPCSQL 435

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145334817|ref|NP_001078754.1| calcium-binding endonuclease/exonuclease/phosphatase family protein [Arabidopsis thaliana] gi|27311783|gb|AAO00857.1| putative protein [Arabidopsis thaliana] gi|30387507|gb|AAP31919.1| At5g54130 [Arabidopsis thaliana] gi|51970738|dbj|BAD44061.1| putative protein [Arabidopsis thaliana] gi|332009070|gb|AED96453.1| calcium-binding endonuclease/exonuclease/phosphatase family protein [Arabidopsis thaliana]

 Score =  757 bits (1954), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/442 (81%), Positives = 395/442 (89%), Gaps = 8/442 (1%)

Query: 5   MKGRISRIGSYAISSSIRDHQQQPCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGR 64
           MKGRIS+IGSYAISSSIRD  QQPCI+CTTFNILAPIYKRLS++DQ+ RESD RAYW GR
Sbjct: 1   MKGRISKIGSYAISSSIRDQHQQPCISCTTFNILAPIYKRLSHKDQSLRESDNRAYWLGR 60

Query: 65  NQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLTAV 124
           N RI+DWLLYERSSIICLQEFWVGNEELV++YEKRL DAGY+++KL RTNNRGDGLLTAV
Sbjct: 61  NHRIIDWLLYERSSIICLQEFWVGNEELVNLYEKRLGDAGYLSYKLGRTNNRGDGLLTAV 120

Query: 125 HKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSS 184
           HKDYFRVVN RDLLFND GDRVAQLLHVEL+ P+SQ    D  QE+LIVNTHLLFPHDS+
Sbjct: 121 HKDYFRVVNSRDLLFNDCGDRVAQLLHVELVPPYSQY---DAHQEVLIVNTHLLFPHDST 177

Query: 185 LSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTA 244
           LS+VRL QVYKILQ+VESYQKE NL P+PIILCGDWNGSKRGHVYKFLRSQGFVSSYDTA
Sbjct: 178 LSIVRLQQVYKILQYVESYQKEVNLSPMPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTA 237

Query: 245 HQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRASL 304
           H+YTD+DAHKWVSHRNHRGNIC VDFIWLLNPN+YRKLLK SWSEAVFGMF+ LLRRASL
Sbjct: 238 HRYTDSDAHKWVSHRNHRGNICAVDFIWLLNPNRYRKLLKTSWSEAVFGMFRYLLRRASL 297

Query: 305 TETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVD 364
           T  DAFAFLK DNDGD+IT+ GFCE L QLNLTGH +GL  +E KDLW QADIDGNG++D
Sbjct: 298 TAEDAFAFLKTDNDGDHITFMGFCETLRQLNLTGHCNGLTTKEIKDLWTQADIDGNGLLD 357

Query: 365 YKEFQQRIWKTTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENY 424
           YKEFQQRIW  TWS+QR     + EDG  K + EQT+GFSVKNAVLFPPEVEKG WPENY
Sbjct: 358 YKEFQQRIWNQTWSEQR-----DAEDGEAKGNQEQTVGFSVKNAVLFPPEVEKGMWPENY 412

Query: 425 SLSDHARLTVVFSPIRMPCSRL 446
           SLSDHARLTVVFSPIRMPCS+L
Sbjct: 413 SLSDHARLTVVFSPIRMPCSQL 434

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224118484|ref|XP_002317830.1| predicted protein [Populus trichocarpa] gi|222858503|gb|EEE96050.1| predicted protein [Populus trichocarpa]

 Score =  750 bits (1937), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/439 (83%), Positives = 396/439 (90%), Gaps = 8/439 (1%)

Query: 13  GSYAISSSI--RDHQQQPCITCTTFNILAPIYKRLS---NEDQNCRESDCRAYWFGRNQR 67
           GSYAISSS+  RDH+QQPCITCTTFNILAPIYKRL+   ++DQN RESD RAYW  RNQR
Sbjct: 14  GSYAISSSMSMRDHRQQPCITCTTFNILAPIYKRLNINNDKDQNSRESDYRAYWLVRNQR 73

Query: 68  ILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLTAVHKD 127
           ILD LL ERSSIICLQEFW+GNEELV+MYEKRL DAGY+NFKLARTNNRGDGLL AV KD
Sbjct: 74  ILDSLLRERSSIICLQEFWLGNEELVNMYEKRLGDAGYLNFKLARTNNRGDGLLIAVRKD 133

Query: 128 YFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSL 187
           YFRV+N+R+LLFND GDRVAQLLHVEL  P S CRN D RQEILIVNTHLLFPHDSSLSL
Sbjct: 134 YFRVINHRELLFNDCGDRVAQLLHVELAAPCSPCRNNDTRQEILIVNTHLLFPHDSSLSL 193

Query: 188 VRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQY 247
           VRL+QVYKILQ+VESYQKE+ L P PI+LCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQY
Sbjct: 194 VRLNQVYKILQYVESYQKENKLSPTPIMLCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQY 253

Query: 248 TDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRASLTET 307
           TDADAHKWVSH NHRGNICGVDFIWLLNPN+YRKLLK SWSEAVFGMFK LLRRASLTE 
Sbjct: 254 TDADAHKWVSHLNHRGNICGVDFIWLLNPNRYRKLLKTSWSEAVFGMFKYLLRRASLTEE 313

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
           DAFAFLKAD+D D ITYSGFCEAL+QLNLTGH +GL+DEETKDLWVQADIDGNGV+DYKE
Sbjct: 314 DAFAFLKADSDSDCITYSGFCEALQQLNLTGHCYGLSDEETKDLWVQADIDGNGVLDYKE 373

Query: 368 FQQRIWKTTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLS 427
           FQQRIW  TWS+++   +DE +D  +K   EQTIGFSV+NAVLFPPEVEKG WPENYSLS
Sbjct: 374 FQQRIWNPTWSEEK---DDEIQDDNLKGREEQTIGFSVENAVLFPPEVEKGMWPENYSLS 430

Query: 428 DHARLTVVFSPIRMPCSRL 446
           DHARLTVVFSPIRMPCS+L
Sbjct: 431 DHARLTVVFSPIRMPCSQL 449

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449438851|ref|XP_004137201.1| PREDICTED: uncharacterized calcium-binding protein At1g02270-like [Cucumis sativus] gi|449483236|ref|XP_004156530.1| PREDICTED: uncharacterized calcium-binding protein At1g02270-like [Cucumis sativus]

 Score =  746 bits (1926), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/444 (80%), Positives = 398/444 (89%), Gaps = 5/444 (1%)

Query: 4   KMKGRISRIGSYAISSSIRDHQ-QQPCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWF 62
           KMKGRIS IGSYAI+SSI+DH  Q+P ITCTTFNILAPIY RL+ +D +CRESD R YW 
Sbjct: 6   KMKGRISMIGSYAIASSIKDHHHQRPSITCTTFNILAPIYNRLNQQDPSCRESDYRTYWL 65

Query: 63  GRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLT 122
            RNQRILDWLLYE+SSIICLQEFWVGN+ELV++YE RL +AGY++FKLARTNNRGDGLLT
Sbjct: 66  ARNQRILDWLLYEKSSIICLQEFWVGNQELVNIYENRLGNAGYISFKLARTNNRGDGLLT 125

Query: 123 AVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHD 182
           AVHKDYFRVVNYR+LLFND GDRVAQLLHVEL  PFS CRN D+RQEILIVNTHLLFPHD
Sbjct: 126 AVHKDYFRVVNYRELLFNDCGDRVAQLLHVELAVPFSHCRNNDIRQEILIVNTHLLFPHD 185

Query: 183 SSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYD 242
           SSL LVRL+QVYKILQ+VESYQKE+ L P+PIILCGDWNGSKRGHVYKFLRSQGFVSSYD
Sbjct: 186 SSLCLVRLNQVYKILQYVESYQKENKLNPMPIILCGDWNGSKRGHVYKFLRSQGFVSSYD 245

Query: 243 TAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRA 302
           TAHQYTDAD+ KWVSHRNHRGNICGVDFIWLLNPN YR+LLKASWSEA+FGMFK LLRRA
Sbjct: 246 TAHQYTDADSRKWVSHRNHRGNICGVDFIWLLNPNGYRRLLKASWSEAIFGMFKYLLRRA 305

Query: 303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGV 362
           SLT  DAFAFLKADNDGDYITYSGFCE L QLNLTGH HGL+ EE  DLWVQAD DGNG+
Sbjct: 306 SLTADDAFAFLKADNDGDYITYSGFCEGLRQLNLTGHLHGLSVEEINDLWVQADSDGNGI 365

Query: 363 VDYKEFQQRIWKTTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPE 422
           +D+ EF QRIW +T +++R++ ++E E    K + EQTIGFSV+NAVLFP EVEKGRWPE
Sbjct: 366 LDHNEF-QRIWNSTGTEKRDEKSNEIES---KENQEQTIGFSVENAVLFPAEVEKGRWPE 421

Query: 423 NYSLSDHARLTVVFSPIRMPCSRL 446
           +YSLSDHARLTVVF+PIRMPCS+L
Sbjct: 422 DYSLSDHARLTVVFAPIRMPCSQL 445

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|259490803|gb|ACW82436.1| calcium binding protein [Lepidium latifolium]

 Score =  741 bits (1913), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/442 (80%), Positives = 391/442 (88%), Gaps = 8/442 (1%)

Query: 5   MKGRISRIGSYAISSSIRDHQQQPCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGR 64
           MKGRIS+IGSYAISSSIRD  QQPCI+CTTFNILAPIYKRLS++DQ+ RESD RAYW GR
Sbjct: 1   MKGRISKIGSYAISSSIRDQHQQPCISCTTFNILAPIYKRLSHKDQSLRESDNRAYWLGR 60

Query: 65  NQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLTAV 124
           N RI+DWLLYERSSIICLQEFWVGNEELV++YEKRL DAGY+++KL RTNNRGDGLLTAV
Sbjct: 61  NHRIVDWLLYERSSIICLQEFWVGNEELVNLYEKRLGDAGYLSYKLGRTNNRGDGLLTAV 120

Query: 125 HKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSS 184
           HKDYFRVVN RDLLFND GDRVAQLLH EL+ P+SQ    D  QE+LIVNTHLLFPHDS+
Sbjct: 121 HKDYFRVVNSRDLLFNDCGDRVAQLLHAELVPPYSQY---DAHQEVLIVNTHLLFPHDST 177

Query: 185 LSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTA 244
           LS+VRL QVYKILQ+VESYQKE NL P+PIILCGDWNGSKRGHVYKFLRSQGFVSSYDTA
Sbjct: 178 LSIVRLQQVYKILQYVESYQKEVNLSPMPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTA 237

Query: 245 HQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRASL 304
           H+YTD+DAHKWVSHRNHRGNIC VDFIWLLNPN+YRKLLK SWSEAVFGMF+ LLRRASL
Sbjct: 238 HRYTDSDAHKWVSHRNHRGNICAVDFIWLLNPNRYRKLLKTSWSEAVFGMFRYLLRRASL 297

Query: 305 TETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVD 364
           T  DAFAFLK DNDGD+IT+ GFCE L QLNLTGH +GL  +E KDLW+QADIDGNG++D
Sbjct: 298 TAEDAFAFLKTDNDGDHITFMGFCETLRQLNLTGHCNGLTTKEIKDLWIQADIDGNGLLD 357

Query: 365 YKEFQQRIWKTTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENY 424
           YKEF+QRIW   WS+QR     + ED   K + EQT+GFSVKNAVLFPPEV KG WP+NY
Sbjct: 358 YKEFRQRIWNQPWSEQR-----DAEDREAKGNQEQTVGFSVKNAVLFPPEVGKGIWPKNY 412

Query: 425 SLSDHARLTVVFSPIRMPCSRL 446
           SLSDHARLTVVFSPI MPCS+L
Sbjct: 413 SLSDHARLTVVFSPITMPCSQL 434

Source: Lepidium latifolium

Species: Lepidium latifolium

Genus: Lepidium

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356518677|ref|XP_003528005.1| PREDICTED: uncharacterized calcium-binding protein At1g02270-like [Glycine max]

 Score =  738 bits (1906), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/450 (79%), Positives = 401/450 (89%), Gaps = 6/450 (1%)

Query: 1   MRT----KMKGRISRIGSYAISSSIRDHQQQPCITCTTFNILAPIYKRLSNEDQNCRESD 56
           MRT    K  GRISRIGS+AISSSI+++QQQPCITCTTFNILAPIYKR+++ED +CRESD
Sbjct: 1   MRTDRWAKSMGRISRIGSFAISSSIKENQQQPCITCTTFNILAPIYKRINHEDPSCRESD 60

Query: 57  CRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNR 116
            RAYW  RN RILDWLL ERSSIICLQEFWVGNEELV++YEKRL DAGYV+FKL RTNNR
Sbjct: 61  YRAYWLARNHRILDWLLNERSSIICLQEFWVGNEELVNLYEKRLGDAGYVSFKLGRTNNR 120

Query: 117 GDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTH 176
           GDGLL AV K+YF ++NY++L FNDFGDRVAQLLHVEL  PFSQ RN ++RQEILIVNTH
Sbjct: 121 GDGLLIAVQKEYFNILNYKELHFNDFGDRVAQLLHVELASPFSQWRNSNIRQEILIVNTH 180

Query: 177 LLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQG 236
           LLFPHDS+LSLVRL QVYKILQ+VESYQ +  LKP+PI+LCGDWNGSKRGHVYKFLRSQG
Sbjct: 181 LLFPHDSTLSLVRLQQVYKILQYVESYQNDFQLKPMPIMLCGDWNGSKRGHVYKFLRSQG 240

Query: 237 FVSSYDTAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFK 296
           FVSSYDTAHQYTDADAHKWVSHRNHRGNIC VDFIWLLNP+KYRKLLKASWSEAVFGMFK
Sbjct: 241 FVSSYDTAHQYTDADAHKWVSHRNHRGNICAVDFIWLLNPDKYRKLLKASWSEAVFGMFK 300

Query: 297 CLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQAD 356
            LLRRASLTE+DAF+FLK DN+ D ITY GFCEAL+QL+LTGH HGL++EE KDLW+QAD
Sbjct: 301 YLLRRASLTESDAFSFLKVDNE-DCITYFGFCEALKQLSLTGHCHGLSEEEIKDLWLQAD 359

Query: 357 IDGNGVVDYKEFQQRIWKTTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVE 416
           +DG GV+D+KEF Q+IW +T  D+ ++ N + +DG    + EQTIGFSVKNAVLFPPEVE
Sbjct: 360 VDGKGVLDFKEFLQQIWSSTAPDRDDNKNGDQDDG-SNDAQEQTIGFSVKNAVLFPPEVE 418

Query: 417 KGRWPENYSLSDHARLTVVFSPIRMPCSRL 446
           KGRWPE+YSLSDHARLTVVF PIRMPCS+L
Sbjct: 419 KGRWPEDYSLSDHARLTVVFLPIRMPCSQL 448

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255560600|ref|XP_002521314.1| carbon catabolite repressor protein, putative [Ricinus communis] gi|223539499|gb|EEF41088.1| carbon catabolite repressor protein, putative [Ricinus communis]

 Score =  738 bits (1905), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/445 (81%), Positives = 389/445 (87%), Gaps = 3/445 (0%)

Query: 4   KMKGRISRIGSYAISSSI--RDHQQQPCITCTTFNILAPIYKRLSNEDQNCR-ESDCRAY 60
           K KGRISRIGSYAISSS+  RDH+QQPCITCTTFNILAPIYKRL+  +     ESDCRAY
Sbjct: 9   KNKGRISRIGSYAISSSMSMRDHRQQPCITCTTFNILAPIYKRLNLNNNKNSRESDCRAY 68

Query: 61  WFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGL 120
           W  RN RILD LL ERSSIICLQEFW GNEELV+MYEKRL DAGY+NF+L RTNNRGDGL
Sbjct: 69  WLARNHRILDSLLRERSSIICLQEFWSGNEELVNMYEKRLGDAGYINFQLPRTNNRGDGL 128

Query: 121 LTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFP 180
           LTA+ KDYFRV+NYR++ FNDFGDRVAQLLHVEL  PFS CRN D  QEILIVNTHLLFP
Sbjct: 129 LTAIRKDYFRVINYREVHFNDFGDRVAQLLHVELDAPFSPCRNNDTCQEILIVNTHLLFP 188

Query: 181 HDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSS 240
           HDSSL +VRLHQVYKILQHVESYQKE  L P PIILCGDWNGSKRGHVYKFLRSQGFVSS
Sbjct: 189 HDSSLCIVRLHQVYKILQHVESYQKECKLSPRPIILCGDWNGSKRGHVYKFLRSQGFVSS 248

Query: 241 YDTAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLR 300
           YD AHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPN Y KLLK SWSEAVF MFK LLR
Sbjct: 249 YDAAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNGYCKLLKTSWSEAVFDMFKYLLR 308

Query: 301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGN 360
           RASLTE DAFAFLKAD DGD ITY GFC+AL QL LTGH+HGL  EETKDLW+QADIDG+
Sbjct: 309 RASLTEEDAFAFLKADKDGDCITYVGFCDALRQLKLTGHRHGLCAEETKDLWLQADIDGS 368

Query: 361 GVVDYKEFQQRIWKTTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRW 420
           G++DYKEFQQRIW    ++Q++++ +EDEDG  +   EQTIGFSV+NAVLFPPE EKGRW
Sbjct: 369 GLLDYKEFQQRIWNPASAEQKDEITNEDEDGIPRDRQEQTIGFSVENAVLFPPEAEKGRW 428

Query: 421 PENYSLSDHARLTVVFSPIRMPCSR 445
           PENYSLSDHARLTVVFSPIRMPCS+
Sbjct: 429 PENYSLSDHARLTVVFSPIRMPCSQ 453

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356507540|ref|XP_003522522.1| PREDICTED: uncharacterized calcium-binding protein At1g02270-like [Glycine max]

 Score =  736 bits (1899), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/444 (79%), Positives = 396/444 (89%), Gaps = 2/444 (0%)

Query: 3   TKMKGRISRIGSYAISSSIRDHQQQPCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWF 62
            K  GRISRIGS+AISSSI+++QQQPCITCTTFNILAPIYKR+++ED +CRESD RAYW 
Sbjct: 7   AKSMGRISRIGSFAISSSIKENQQQPCITCTTFNILAPIYKRINHEDPSCRESDYRAYWL 66

Query: 63  GRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLT 122
            RN RILDWLL +RSSIICLQEFWVGNEELV++YEK L DAGYV+FKL RTNNRGDGLL 
Sbjct: 67  ARNHRILDWLLNDRSSIICLQEFWVGNEELVNLYEKSLGDAGYVSFKLGRTNNRGDGLLI 126

Query: 123 AVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHD 182
           AV ++YF ++NY++L FNDFGDRVAQLLHVEL  P SQ RN ++RQEILIVNTHL+FPHD
Sbjct: 127 AVQREYFNILNYKELHFNDFGDRVAQLLHVELASPISQWRNSNIRQEILIVNTHLIFPHD 186

Query: 183 SSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYD 242
           S+LSLVRL QVYKILQ+VESYQ +  LKP+PI+LCGDWNGSKRGHVYKFLRSQGFVSSYD
Sbjct: 187 STLSLVRLQQVYKILQYVESYQNDFQLKPMPIVLCGDWNGSKRGHVYKFLRSQGFVSSYD 246

Query: 243 TAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRA 302
           TAH YTDADAHKWVSHRNHRGNIC VDFIWLLNP+KYRKLLKASWSEAVFGMFK LLRRA
Sbjct: 247 TAHHYTDADAHKWVSHRNHRGNICAVDFIWLLNPDKYRKLLKASWSEAVFGMFKYLLRRA 306

Query: 303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGV 362
            LTE+DAFAFLK DN+ D ITYSGFCEAL+QL+LTGH HGL+DEE KDLWVQAD+DGNGV
Sbjct: 307 ILTESDAFAFLKVDNE-DCITYSGFCEALKQLSLTGHCHGLSDEEIKDLWVQADVDGNGV 365

Query: 363 VDYKEFQQRIWKTTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPE 422
           +DYK+F Q+IW +T  D  ++ N + +DG    + EQTIGFSVKNAVLFPPEVEKGRWPE
Sbjct: 366 LDYKKFLQQIWSSTAPDIDDNKNGDQDDG-SNDAQEQTIGFSVKNAVLFPPEVEKGRWPE 424

Query: 423 NYSLSDHARLTVVFSPIRMPCSRL 446
           +YSLSDHARLTVVFSPIRMPCS+L
Sbjct: 425 DYSLSDHARLTVVFSPIRMPCSQL 448

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	447
TAIR|locus:2166547	436	AT5G54130 [Arabidopsis thalian	0.970	0.995	0.819	7.3e-201
TAIR|locus:2204863	484	AT1G02270 "AT1G02270" [Arabido	0.982	0.907	0.619	4.1e-152
TAIR|locus:504956231	454	AT1G73875 "AT1G73875" [Arabido	0.425	0.418	0.265	6.1e-07
UNIPROTKB|F1NGS9	569	PDE12 "Uncharacterized protein	0.223	0.175	0.283	7.1e-05
TAIR|locus:2832132	754	AT5G11350 "AT5G11350" [Arabido	0.360	0.213	0.267	0.00012
FB|FBgn0016762	354	angel "angel" [Drosophila mela	0.362	0.457	0.262	0.00014
ZFIN|ZDB-GENE-030131-6498	569	angel2 "angel homolog 2 (Droso	0.364	0.286	0.251	0.00014

TAIR|locus:2166547 AT5G54130 [Arabidopsis thaliana (taxid:3702)]

 Score = 1944 (689.4 bits), Expect = 7.3e-201, P = 7.3e-201
 Identities = 362/442 (81%), Positives = 395/442 (89%)

Query:     5 MKGRISRIGSYAISSSIRDHQQQPCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGR 64
             MKGRIS+IGSYAISSSIRD  QQPCI+CTTFNILAPIYKRLS++DQ+ RESD RAYW GR
Sbjct:     1 MKGRISKIGSYAISSSIRDQHQQPCISCTTFNILAPIYKRLSHKDQSLRESDNRAYWLGR 60

Query:    65 NQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLTAV 124
             N RI+DWLLYERSSIICLQEFWVGNEELV++YEKRL DAGY+++KL RTNNRGDGLLTAV
Sbjct:    61 NHRIIDWLLYERSSIICLQEFWVGNEELVNLYEKRLGDAGYLSYKLGRTNNRGDGLLTAV 120

Query:   125 HKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSS 184
             HKDYFRVVN RDLLFND GDRVAQLLHVEL+ P+SQ    D  QE+LIVNTHLLFPHDS+
Sbjct:   121 HKDYFRVVNSRDLLFNDCGDRVAQLLHVELVPPYSQY---DAHQEVLIVNTHLLFPHDST 177

Query:   185 LSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTA 244
             LS+VRL QVYKILQ+VESYQKE NL P+PIILCGDWNGSKRGHVYKFLRSQGFVSSYDTA
Sbjct:   178 LSIVRLQQVYKILQYVESYQKEVNLSPMPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTA 237

Query:   245 HQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRASL 304
             H+YTD+DAHKWVSHRNHRGNIC VDFIWLLNPN+YRKLLK SWSEAVFGMF+ LLRRASL
Sbjct:   238 HRYTDSDAHKWVSHRNHRGNICAVDFIWLLNPNRYRKLLKTSWSEAVFGMFRYLLRRASL 297

Query:   305 TETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVD 364
             T  DAFAFLK DNDGD+IT+ GFCE L QLNLTGH +GL  +E KDLW QADIDGNG++D
Sbjct:   298 TAEDAFAFLKTDNDGDHITFMGFCETLRQLNLTGHCNGLTTKEIKDLWTQADIDGNGLLD 357

Query:   365 YKEFQQRIWKTTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENY 424
             YKEFQQRIW  TWS+QR     + EDG  K + EQT+GFSVKNAVLFPPEVEKG WPENY
Sbjct:   358 YKEFQQRIWNQTWSEQR-----DAEDGEAKGNQEQTVGFSVKNAVLFPPEVEKGMWPENY 412

Query:   425 SLSDHARLTVVFSPIRMPCSRL 446
             SLSDHARLTVVFSPIRMPCS+L
Sbjct:   413 SLSDHARLTVVFSPIRMPCSQL 434

GO:0005509 "calcium ion binding" evidence=IEA

TAIR|locus:2204863 AT1G02270 "AT1G02270" [Arabidopsis thaliana (taxid:3702)]

 Score = 1484 (527.5 bits), Expect = 4.1e-152, P = 4.1e-152
 Identities = 273/441 (61%), Positives = 344/441 (78%)

Query:     5 MKGRISR-IGSYAISSSIRDHQQQPCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFG 63
             + GR ++ +    ++S++     +  I+CTTFNILAPIYKR+  ++ + RESD R  W  
Sbjct:    45 LSGRNNKPLSVMRLNSNLASSMVESNISCTTFNILAPIYKRVDQKNHSTRESDFRTLWLA 104

Query:    64 RNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLTA 123
             RNQRILD LL++RSS+ICLQE WVGNEELV+MY  +LS +GY  ++LARTN+RGDGLLTA
Sbjct:   105 RNQRILDLLLHQRSSVICLQEVWVGNEELVNMYHHQLSSSGYTIYQLARTNSRGDGLLTA 164

Query:   124 VHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDS 183
             +HKD+F+VVNYR+LLFNDFGDRVAQLLHV+ + PF      D++QE++IVNTHLLFPHDS
Sbjct:   165 IHKDHFKVVNYRELLFNDFGDRVAQLLHVKTVIPFPLNGKQDVQQEVIIVNTHLLFPHDS 224

Query:   184 SLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDT 243
             SLS+VRLHQVYKIL+++E+YQKE+ L  +PIILCGDWNGSKRGHVYKFLRSQGF+SSYD 
Sbjct:   225 SLSIVRLHQVYKILEYLEAYQKENKLNHMPIILCGDWNGSKRGHVYKFLRSQGFISSYDD 284

Query:   244 AHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRAS 303
             AHQYTD+DAH+WVSHRNHRGNICGVDFIWL NP+  RK L+ SW EAVF + K  L +AS
Sbjct:   285 AHQYTDSDAHRWVSHRNHRGNICGVDFIWLCNPSDSRKPLRTSWVEAVFSIIKYQLHKAS 344

Query:   304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVV 363
             + E DAF FL A N  D +TYS FC AL+++NLTG  HGL+ EETK+LWV+AD+DGNGV 
Sbjct:   345 IAEDDAFTFLGAKNHSDSLTYSDFCLALQKVNLTGIPHGLSFEETKELWVRADLDGNGVF 404

Query:   364 DYKEFQQRIWKTTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPEN 423
             DY+E + +IW  T  +Q  +  +   +   +   ++ IG  V  A+LFP E EKG WPEN
Sbjct:   405 DYEELK-KIWNMTMVNQPGNCKESVMESKKEEGEDEAIGLKVNKAILFPQEAEKGLWPEN 463

Query:   424 YSLSDHARLTVVFSPIRMPCS 444
             Y++SDHA LTV FSP++M CS
Sbjct:   464 YNISDHACLTVQFSPVKMLCS 484

GO:0003824 "catalytic activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=IDA

GO:0009409 "response to cold" evidence=IEP

TAIR|locus:504956231 AT1G73875 "AT1G73875" [Arabidopsis thaliana (taxid:3702)]

 Score = 145 (56.1 bits), Expect = 6.1e-07, P = 6.1e-07
 Identities = 56/211 (26%), Positives = 98/211 (46%)

Query:    61 WFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGL 120
             W  R   I   +    +SI+CLQE      +  D  +  L + G+     +RT    DG 
Sbjct:   130 WSRRKHLICKEISRYNASILCLQEV-----DRFDDLDVLLKNRGFRGVHKSRTGEASDGC 184

Query:   121 LTAVHKDYFRVVNYRDLLFNDFGDR--VAQLLHVELI---DPFSQCR--NGDLRQEILIV 173
                  ++ F +++++ + F+ FG R  VAQL  +E+    DP S+ R  + D R+ +++ 
Sbjct:   185 AIFWKENLFELLDHQHIEFDKFGMRNNVAQLCVLEMNCEEDPKSKLRVRSSDPRR-LVVG 243

Query:   174 NTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLR 233
             N H+LF  +     ++L QV   L+  ++Y+       IP+ + GD N + +  +Y F+ 
Sbjct:   244 NIHVLF--NPKRGDIKLGQVRLFLE--KAYKLSQEWGNIPVAIAGDLNSTPQSAIYDFIA 299

Query:   234 SQGFVSSYDTAHQY---TDADAHKWVSHRNH 261
             S    +      Q    T+ +  K  S RNH
Sbjct:   300 SADLDTQLHDRRQISGQTEVEP-KERSFRNH 329

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1NGS9 PDE12 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 103 (41.3 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
 Identities = 30/106 (28%), Positives = 51/106 (48%)

Query:   165 DLRQEILIVNTHLLFPHDSSLS-LVRLHQVYKILQHVESYQKEHNLKP-IPIILCGDWNG 222
             D  +++ + NTHL + H  +L   +RL Q+   L H++    +  L P IP+I CGD+N 
Sbjct:   403 DPSKKLCVANTHLYW-HPKALGGNIRLIQIAVALSHIKYVACD--LYPNIPLIFCGDFNS 459

Query:   223 SKRGHVYKFLRSQGFVSSY-DTAHQYTDADAHKWVSHRNHRGNICG 267
             +     Y F+ + G    + D A    +   +  +SH     + CG
Sbjct:   460 TPSSGTYGFINTGGIAEDHEDWASNGEEERCNMPLSHPFKLQSACG 505

GO:0005739 "mitochondrion" evidence=IEA

TAIR|locus:2832132 AT5G11350 "AT5G11350" [Arabidopsis thaliana (taxid:3702)]

 Score = 133 (51.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
 Identities = 49/183 (26%), Positives = 82/183 (44%)

Query:    61 WFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGL 120
             W  R  +++  L    + I+CLQE     ++  D+ E+ +   GY      RT N  DG 
Sbjct:   214 WGWRKSKLVFELSLWSADIMCLQEV----DKFQDL-EEEMKHRGYSAIWKMRTGNAVDGC 268

Query:   121 LTAVHKDYFRVVNYRDLLFNDFG--DRVAQLLHVELI---------DPFSQCRNGDLRQE 169
                   + F++V+   + FN  G  D VAQ+  +E +          P  +   G  R  
Sbjct:   269 AIFWRSNRFKLVHEESIQFNQLGLRDNVAQICVLETLLTSHTKENETPPPESSAGSHR-- 326

Query:   170 ILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVY 229
             ++I N H+LF  +      +L QV  +L    +  K  +    PI+LCGD+N + +  +Y
Sbjct:   327 VVICNIHVLF--NPKRGDFKLGQVRTLLDKAHAVSKLWD--DAPIVLCGDFNCTPKSPLY 382

Query:   230 KFL 232
              F+
Sbjct:   383 NFI 385

GO:0003824 "catalytic activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

FB|FBgn0016762 angel "angel" [Drosophila melanogaster (taxid:7227)]

 Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
 Identities = 46/175 (26%), Positives = 80/175 (45%)

Query:    61 WFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDA---GYVNFKLARTNNRG 117
             W  R Q +L  LL     I+CLQE    +  ++ +   R+ +     YV  K  +T  R 
Sbjct:    98 WQRRQQNLLRELLKLDPDILCLQEMQFDHLPVL-VQRLRMGNGKKLAYVYKK--KTGCRT 154

Query:   118 DGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHL 177
             DG         F +++++ +   D    +    +V L   F   +  + ++E ++  THL
Sbjct:   155 DGCAIVYDSSKFELLDHQAVELYDQAVALLNRDNVALFARFRFKKQQEQQKEFVVATTHL 214

Query:   178 LFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFL 232
             LF  ++  S VR  QV +IL+ ++S+  +      PI+L GD+N        +FL
Sbjct:   215 LF--NTKRSDVRCAQVERILEELQSFSTD-----TPIVLTGDFNSLPDSSPIEFL 262

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-030131-6498 angel2 "angel homolog 2 (Drosophila)" [Danio rerio (taxid:7955)]

 Score = 125 (49.1 bits), Expect = 0.00014, P = 0.00014
 Identities = 46/183 (25%), Positives = 78/183 (42%)

Query:    61 WFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGY-VNFKLARTNNRGDG 119
             W  R   I+  L    + I+CLQE  V  +      +  L   GY   FK  RT  + DG
Sbjct:   229 WRNRFPNIIKELEQYSADIMCLQE--VQEDHYKQQIKPSLESLGYHCEFK-RRTGLKPDG 285

Query:   120 LLTAVHKDYFRVVNYRDLLFNDFG------DRVAQLLHVELIDPFSQCRNGDLRQEILIV 173
                   ++ F +V+   + +   G      D V  ++ +  IDP     N      I + 
Sbjct:   286 CAVIFKRERFSLVSCHPVEYFRRGVPLMDRDNVGLIVLLRPIDPHVSLSN------ICVA 339

Query:   174 NTHLLF-PHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFL 232
             NTHLL+ P       ++L Q+  +L  +    +  +    P++LCGD+N      +Y+F+
Sbjct:   340 NTHLLYNPRRGD---IKLAQLAMLLAEISRVSQLPDSSVCPVLLCGDFNSVPWSPLYRFI 396

Query:   233 RSQ 235
             + +
Sbjct:   397 KDR 399


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.137   0.433    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      447       447   0.00091  118 3  11 22  0.36    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  630 (67 KB)
  Total size of DFA:  333 KB (2167 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  35.87u 0.13s 36.00t   Elapsed:  00:00:02
  Total cpu time:  35.87u 0.13s 36.00t   Elapsed:  00:00:02
  Start:  Fri May 10 06:38:02 2013   End:  Fri May 10 06:38:04 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	447
cd09097	329	cd09097, Deadenylase_CCR4, C-terminal deadenylase	2e-11
cd09096	280	cd09096, Deadenylase_nocturnin, C-terminal deadeny	3e-09
PLN03144	606	PLN03144, PLN03144, Carbon catabolite repressor pr	4e-07
cd09083	252	cd09083, EEP-1, Exonuclease-Endonuclease-Phosphata	3e-05
cd00051	63	cd00051, EFh, EF-hand, calcium binding motif; A di	8e-05
pfam13499	60	pfam13499, EF_hand_5, EF-hand domain pair	7e-04
COG5239	378	COG5239, CCR4, mRNA deadenylase, exonuclease subun	8e-04
cd08372	241	cd08372, EEP, Exonuclease-Endonuclease-Phosphatase	0.001
cd10313	350	cd10313, Deadenylase_CCR4a, C-terminal deadenylase	0.002
PTZ00184	149	PTZ00184, PTZ00184, calmodulin; Provisional	0.003

>gnl|CDD|197331 cd09097, Deadenylase_CCR4, C-terminal deadenylase domain of CCR4 and related domains

 Score = 64.2 bits (157), Expect = 2e-11
 Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 42/213 (19%)

Query: 61  WFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRG--- 117
           W  R Q IL  +L   + I+CLQE  V  ++  D +   L   GY      ++  +    
Sbjct: 27  WDYRKQNILKEILSYNADILCLQE--VETDQYEDFFLPELKQHGYDGVFKPKSRAKTMSE 84

Query: 118 ------DGLLTAVHKDYFRVVNYRDLLFN-------------DFGDRV------AQLLHV 152
                 DG         F++V    + FN             D  +RV      A ++ +
Sbjct: 85  AERKHVDGCAIFFKTSKFKLVEKHLIEFNQLAMANADAEGSEDMLNRVMTKDNIALIVVL 144

Query: 153 ELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKP- 211
           E  +       G+  Q +++ NTH+ +  +   S V+L Q   +L+ +E   ++ +  P 
Sbjct: 145 EARET---SYEGNKGQLLIVANTHIHWDPE--FSDVKLVQTMMLLEELEKIAEKFSRYPY 199

Query: 212 -----IPIILCGDWNGSKRGHVYKFLRSQGFVS 239
                IP+++CGD+N      VY+ L S G VS
Sbjct: 200 EDSADIPLVVCGDFNSLPDSGVYELL-SNGSVS 231

This subfamily contains the C-terminal catalytic domain of the deadenylases, Saccharomyces cerevisiae Ccr4p and two vertebrate homologs (CCR4a and CCR4b), and related domains. CCR4 belongs to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds. CCR4 is the major deadenylase subunit of the CCR4-NOT transcription complex, which contains two deadenylase subunits and several noncatalytic subunits. The other deadenylase subunit, Caf1 (called Pop2 in yeast), is a DEDD-type protein and does not belong in this superfamily. Saccharomyces cerevisiae CCR4 (or Ccr4p) is a 3'-5' poly(A) RNA and ssDNA exonuclease. It is the catalytic subunit of the yeast mRNA deadenylase (Ccr4p/Pop2p/Not complex). This complex participates in various ways in mRNA metabolism, including transcription initiation and elongation, and mRNA degradation. Ccr4p degrades both poly(A) and single-stranded DNA. There are two vertebrate homologs of Ccr4p, CCR4a (also called CCR4-NOT transcription complex subunit 6 or CNOT6) and CCR4b (also called CNOT6-like or CNOT6L), which independently associate with other components to form distinct CCR4-NOT multisubunit complexes. The nuclease domain of CNOT6 and CNOT6L exhibits Mg2+-dependent deadenylase activity, with specificity for poly (A) RNA as substrate. CCR4a is a component of P-bodies and is necessary for foci formation. CCR4b regulates p27/Kip1 mRNA levels, thereby influencing cell cycle progression. They both contribute to the prevention of cell death by regulating insulin-like growth factor-binding protein 5. Length = 329

>gnl|CDD|197330 cd09096, Deadenylase_nocturnin, C-terminal deadenylase domain of nocturnin and related domains

 Score = 57.4 bits (139), Expect = 3e-09
 Identities = 52/207 (25%), Positives = 82/207 (39%), Gaps = 34/207 (16%)

Query: 61  WFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMY----EKRLSDAGYVNFKLA----- 111
           W  R   IL+ +L     I+CLQE        VD Y    +  LS  GY           
Sbjct: 29  WEERKYLILEEILTYDPDILCLQE--------VDHYKDTLQPLLSRLGYQGTFFPKPDSP 80

Query: 112 ----RTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLR 167
                 NN  DG      KD F +VN   +  +    +  Q   V +     +C+     
Sbjct: 81  CLYIENNNGPDGCALFFRKDRFELVNTEKIRLSAMTLKTNQ---VAIACTL-RCKETG-- 134

Query: 168 QEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGH 227
           +EI +  THL     +    +R  Q   +LQ+++S+ +      IP+I+CGD+N      
Sbjct: 135 REICLAVTHL--KARTGWERLRSEQGKDLLQNLQSFIEG---AKIPLIICGDFNAEPTEP 189

Query: 228 VYKFLRSQGFVSSYDTAHQYTDADAHK 254
           VYK   +     + ++A++   AD   
Sbjct: 190 VYKTFSNSSL--NLNSAYKLLSADGQS 214

This subfamily contains the C-terminal catalytic domain of the deadenylase, nocturnin, and related domains. Nocturnin is a poly(A)-specific 3' exonuclease that specifically degrades the 3' poly(A) tail of RNA in a process known as deadenylation. This nuclease activity is manganese dependent. Nocturnin is expressed in the cytoplasm of Xenopus laevis retinal photoreceptor cells in a rhythmic fashion, and it has been proposed that it participates in posttranscriptional regulation of the circadian clock or its outputs, and that the mRNA target(s) of this deadenylase are circadian clock-related. In mouse, the nocturnin gene, mNoc, is expressed in a circadian pattern in a range of tissues including retina, spleen, heart, kidney, and liver. It is highly expressed in bone-marrow stromal cells, adipocytes and hepatocytes. In mammals, nocturnin plays a role in regulating mesenchymal stem-cell lineage allocation, perhaps through regulating PPAR-gamma (peroxisome proliferator-activated receptor-gamma) nuclear translocation. This subfamily belongs to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds. Length = 280

>gnl|CDD|178689 PLN03144, PLN03144, Carbon catabolite repressor protein 4 homolog; Provisional

 Score = 52.0 bits (125), Expect = 4e-07
 Identities = 58/228 (25%), Positives = 95/228 (41%), Gaps = 55/228 (24%)

Query: 31  TCTTFNILAPIYKRLSNEDQNCRESDCRAY---WFGRNQRILDWLLYERSSIICLQEFWV 87
           T  ++NIL+ +Y   +  D     S C  +   W  R Q +L  ++  R+ I+CLQE  V
Sbjct: 256 TVLSYNILSDLY---ATSDMY---SYCPPWALSWTYRRQNLLREIVGYRADILCLQE--V 307

Query: 88  GNEELVDMYEKRLSDAGYVNFKLARTN-------NRGDGLLTAVHKDYFRVVNYRDLLFN 140
            ++   + +   L   GY      +T           DG  T   +D F +V   ++ FN
Sbjct: 308 QSDHFEEFFAPELDKHGYQALYKKKTTEVYTGNTYVIDGCATFFRRDRFSLVKKYEVEFN 367

Query: 141 DFGDRVAQLLHVELIDPFSQCR---------------------------NGDLRQEILIV 173
               + AQ L  E + P +Q +                           NG  RQ + + 
Sbjct: 368 ----KAAQSL-TEALIPSAQKKAALNRLLKDNVALIVVLEAKFGNQGADNGGKRQLLCVA 422

Query: 174 NTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWN 221
           NTH+    +  L  V+L QV+ +L+ +E   K      IP+++CGD+N
Sbjct: 423 NTHIHANQE--LKDVKLWQVHTLLKGLE---KIAASADIPMLVCGDFN 465

Length = 606

>gnl|CDD|197317 cd09083, EEP-1, Exonuclease-Endonuclease-Phosphatase domain; uncharacterized family 1

 Score = 45.3 bits (108), Expect = 3e-05
 Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 9/77 (11%)

Query: 168 QEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGH 227
           +E  + NTH    H    +  R      IL+ ++          +P+IL GD+N      
Sbjct: 126 KEFYVFNTH--LDHVGEEA--REESAKLILERIKEIAG-----DLPVILTGDFNAEPDSE 176

Query: 228 VYKFLRSQGFVSSYDTA 244
            YK L S G   + DTA
Sbjct: 177 PYKTLTSGGLKDARDTA 193

This family of uncharacterized proteins belongs to a superfamily that includes the catalytic domain (exonuclease/endonuclease/phosphatase, EEP, domain) of a diverse set of proteins including the ExoIII family of apurinic/apyrimidinic (AP) endonucleases, inositol polyphosphate 5-phosphatases (INPP5), neutral sphingomyelinases (nSMases), deadenylases (such as the vertebrate circadian-clock regulated nocturnin), bacterial cytolethal distending toxin B (CdtB), deoxyribonuclease 1 (DNase1), the endonuclease domain of the non-LTR retrotransposon LINE-1, and related domains. These diverse enzymes share a common catalytic mechanism of cleaving phosphodiester bonds. Their substrates range from nucleic acids to phospholipids and perhaps, proteins. Length = 252

>gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

 Score = 40.2 bits (95), Expect = 8e-05
 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 6/65 (9%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
           +AF     D DG  I+      AL+ L       GL++EE  ++  + D DG+G +D++E
Sbjct: 4   EAFRLFDKDGDG-TISADELKAALKSLGE-----GLSEEEIDEMIREVDKDGDGKIDFEE 57

Query: 368 FQQRI 372
           F + +
Sbjct: 58  FLELM 62

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63

>gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair

 Score = 37.3 bits (87), Expect = 7e-04
 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%)

Query: 314 KADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQ 370
             D DGD YI      + L+ L L      + +E  +  + + D DG+G + ++EF +
Sbjct: 2   LLDKDGDGYIDVEELRKLLKALGLKLTDEEV-EELIEADFNEIDKDGDGRISFEEFLE 58

Length = 60

>gnl|CDD|227564 COG5239, CCR4, mRNA deadenylase, exonuclease subunit and related nucleases [RNA processing and modification]

 Score = 40.9 bits (96), Expect = 8e-04
 Identities = 62/303 (20%), Positives = 106/303 (34%), Gaps = 73/303 (24%)

Query: 30  ITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGN 89
            T  T+N+LA  Y       +    S     W  R++ +L  LLY  + I+CLQE  V  
Sbjct: 31  FTIMTYNVLAQTYAT----RKMYPYSGWALKWSYRSRLLLQELLYYNADILCLQE--VDA 84

Query: 90  EELVDMYEKRLSDAGY--VNFKLAR----------TNNRG-------------DGLLTAV 124
           E+  D ++ +L   GY  +     R          T   G              GL+ AV
Sbjct: 85  EDFEDFWKDQLGKLGYDGIFIPKERKVKWMIDYDTTKVDGCAIFLKRFIDSSKLGLILAV 144

Query: 125 HKD------YFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLL 178
                    Y+       +L N    R+ +  ++  +  F    N +      + NTHL 
Sbjct: 145 THLFWHPYGYYERFRQTYILLN----RIGEKDNIAWVCLFVGLFNKEPGDTPYVANTHL- 199

Query: 179 FPHDSSLSLVRLHQVYKILQHVESYQKEHN-----------LKPIPIILCGDWNGSKRGH 227
            P D     V+L Q   + + ++   KE                + I++ GD+N  +   
Sbjct: 200 -PWDPKYRDVKLIQCSLLYRELKKVLKEELNDDKEEGDIKSYPEVDILITGDFNSLRASL 258

Query: 228 VYKFLRSQGFVSSYDTAHQ-----------------YTDADAHKWVSHRNHRGNICGV-D 269
           VYKFL +   +  +++ +                      ++   +   N      GV D
Sbjct: 259 VYKFLVTS-QIQLHESLNGRDFSLYSVGYKFVHPENLKSDNSKGELGFTNWTPGFKGVID 317

Query: 270 FIW 272
           +I+
Sbjct: 318 YIF 320

Length = 378

>gnl|CDD|197306 cd08372, EEP, Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily

 Score = 40.2 bits (94), Expect = 0.001
 Identities = 41/193 (21%), Positives = 74/193 (38%), Gaps = 29/193 (15%)

Query: 67  RILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRG-DGLLTAVH 125
            I  W+      I+CLQE  V + +   +   +L   GY  ++   +   G +G+     
Sbjct: 17  GIARWVRELDPDIVCLQE--VKDSQYSAVALNQLLPEGYHQYQSGPSRKEGYEGVAILSK 74

Query: 126 KDYFRVVNYRDLLFN--DFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDS 183
              F++V      F   D G+R A ++  ++ D           +E+ +VN HL      
Sbjct: 75  TPKFKIVEKHQYKFGEGDSGERRAVVVKFDVHD-----------KELCVVNAHL--QAGG 121

Query: 184 SLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGF------ 237
           + + VR  Q+ ++L   E  ++       P+++CGD+N        +   S         
Sbjct: 122 TRADVRDAQLKEVL---EFLKRLRQPNSAPVVICGDFNVRPSEVDSENPSSMLRLFVALN 178

Query: 238 --VSSYDTAHQYT 248
              S     H YT
Sbjct: 179 LVDSFETLPHAYT 191

This large superfamily includes the catalytic domain (exonuclease/endonuclease/phosphatase or EEP domain) of a diverse set of proteins including the ExoIII family of apurinic/apyrimidinic (AP) endonucleases, inositol polyphosphate 5-phosphatases (INPP5), neutral sphingomyelinases (nSMases), deadenylases (such as the vertebrate circadian-clock regulated nocturnin), bacterial cytolethal distending toxin B (CdtB), deoxyribonuclease 1 (DNase1), the endonuclease domain of the non-LTR retrotransposon LINE-1, and related domains. These diverse enzymes share a common catalytic mechanism of cleaving phosphodiester bonds; their substrates range from nucleic acids to phospholipids and perhaps proteins. Length = 241

>gnl|CDD|197340 cd10313, Deadenylase_CCR4a, C-terminal deadenylase domain of CCR4a, also known as CCR4-NOT transcription complex subunit 6

 Score = 40.0 bits (93), Expect = 0.002
 Identities = 58/227 (25%), Positives = 89/227 (39%), Gaps = 49/227 (21%)

Query: 61  WFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNF----KLARTNNR 116
           W  R + I+  +L   + II LQE  V  E+    +   L + GY  F      ART + 
Sbjct: 27  WDYRKKAIMQEILSCNADIISLQE--VETEQYYSFFLVELKERGYNGFFSPKSRARTMSE 84

Query: 117 G-----DGLLTAVHKDYFRVVNYRDLLFNDFG-----------DRV--------AQLLHV 152
                 DG       + F +V    + FN              +RV        A LL +
Sbjct: 85  QERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMANSEGSEAMLNRVMTKDNIGVAVLLEL 144

Query: 153 --ELID-PFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESY--QKEH 207
             ELI+    +   G  +Q IL+ N H+ +  D   S V+L Q    L  V++   +   
Sbjct: 145 RKELIEMSSGKPHLGMEKQLILVANAHMHW--DPEYSDVKLVQTMMFLSEVKNIIDKASR 202

Query: 208 NLKP--------IPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQ 246
           +LK         IP++LC D N      V ++L + G     +T H+
Sbjct: 203 SLKSSVLGETGTIPLVLCADLNSLPDSGVVEYLSTGGV----ETNHK 245

This subfamily contains the C-terminal catalytic domain of the deadenylase, CCR4a, also known as CCR4-NOT transcription complex subunit 6 (CNOT6). CCR4 belongs to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds. CCR4 is the major deadenylase subunit of the CCR4-NOT transcription complex, which contains two deadenylase subunits and several noncatalytic subunits. The other deadenylase subunit, Caf1, is a DEDD-type protein and does not belong in this superfamily. There are two vertebrate CCR4 proteins, CCR4a and CCR4b (also called CNOT6-like or CNOT6L). CCR4a associates with other components, such as CNOT1-3 and Caf1, to form a CCR4-NOT multisubunit complex, which regulates transcription and mRNA degradation. The nuclease domain of CCR4a exhibits Mg2+-dependent deadenylase activity with specificity for poly (A) RNA as substrate. CCR4a is a component of P-bodies and is necessary for foci formation of various P-body components. It also plays a role in cellular responses to DNA damage, by regulating Chk2 activity. Length = 350

>gnl|CDD|185504 PTZ00184, PTZ00184, calmodulin; Provisional

 Score = 37.8 bits (88), Expect = 0.003
 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 6/59 (10%)

Query: 311 AFLKADNDGDYITYSGFCEALEQLN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 368
           AF   D DG+     GF  A E  + +T     L DEE  ++  +AD+DG+G ++Y+EF
Sbjct: 89  AFKVFDRDGN-----GFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 142

Length = 149

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	447
PLN03144	606	Carbon catabolite repressor protein 4 homolog; Pro	99.98
KOG2338	495	consensus Transcriptional effector CCR4-related pr	99.97
PRK11756	268	exonuclease III; Provisional	99.92
TIGR03395	283	sphingomy sphingomyelin phosphodiesterase. Members	99.91
COG0708	261	XthA Exonuclease III [DNA replication, recombinati	99.9
COG5239	378	CCR4 mRNA deadenylase, exonuclease subunit and rel	99.86
KOG3873	422	consensus Sphingomyelinase family protein [Signal	99.85
COG3568	259	ElsH Metal-dependent hydrolase [General function p	99.85
PRK13911	250	exodeoxyribonuclease III; Provisional	99.85
TIGR00195	254	exoDNase_III exodeoxyribonuclease III. The model b	99.84
TIGR00633	255	xth exodeoxyribonuclease III (xth). This family is	99.83
PRK05421	263	hypothetical protein; Provisional	99.79
PTZ00297	1452	pantothenate kinase; Provisional	99.75
smart00476	276	DNaseIc deoxyribonuclease I. Deoxyribonuclease I c	99.74
PF03372	249	Exo_endo_phos: Endonuclease/Exonuclease/phosphatas	99.71
KOG0620	361	consensus Glucose-repressible alcohol dehydrogenas	99.68
KOG2756	349	consensus Predicted Mg2+-dependent phosphodiestera	99.63
PRK15251	271	cytolethal distending toxin subunit CdtB; Provisio	99.54
COG2374	798	Predicted extracellular nuclease [General function	99.38
cd05022	89	S-100A13 S-100A13: S-100A13 domain found in protei	99.35
COG3021	309	Uncharacterized protein conserved in bacteria [Fun	99.29
COG5126	160	FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S	99.29
cd05027	88	S-100B S-100B: S-100B domain found in proteins sim	99.25
PF13499	66	EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A	99.24
KOG0027	151	consensus Calmodulin and related proteins (EF-Hand	99.19
cd05026	93	S-100Z S-100Z: S-100Z domain found in proteins sim	99.12
cd05029	88	S-100A6 S-100A6: S-100A6 domain found in proteins	99.09
COG5126	160	FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S	99.08
cd05025	92	S-100A1 S-100A1: S-100A1 domain found in proteins	99.06
cd05031	94	S-100A10_like S-100A10_like: S-100A10 domain found	99.04
KOG0037	221	consensus Ca2+-binding protein, EF-Hand protein su	99.04
KOG0027	151	consensus Calmodulin and related proteins (EF-Hand	99.03
smart00027	96	EH Eps15 homology domain. Pair of EF hand motifs t	99.03
cd00052	67	EH Eps15 homology domain; found in proteins implic	99.01
KOG0028	172	consensus Ca2+-binding protein (centrin/caltractin	98.98
cd05023	89	S-100A11 S-100A11: S-100A11 domain found in protei	98.96
cd00213	88	S-100 S-100: S-100 domain, which represents the la	98.92
KOG0041	244	consensus Predicted Ca2+-binding protein, EF-Hand	98.91
PF13833	54	EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A	98.91
PTZ00183	158	centrin; Provisional	98.81
cd00051	63	EFh EF-hand, calcium binding motif; A diverse supe	98.76
PTZ00184	149	calmodulin; Provisional	98.75
cd05030	88	calgranulins Calgranulins: S-100 domain found in p	98.72
KOG0028	172	consensus Ca2+-binding protein (centrin/caltractin	98.71
PF14658	66	EF-hand_9: EF-hand domain	98.71
cd00252	116	SPARC_EC SPARC_EC; extracellular Ca2+ binding doma	98.69
KOG0031	171	consensus Myosin regulatory light chain, EF-Hand p	98.67
PTZ00184	149	calmodulin; Provisional	98.65
KOG0037	221	consensus Ca2+-binding protein, EF-Hand protein su	98.63
KOG0030	152	consensus Myosin essential light chain, EF-Hand pr	98.63
PTZ00183	158	centrin; Provisional	98.63
KOG0036	463	consensus Predicted mitochondrial carrier protein	98.59
KOG0031	171	consensus Myosin regulatory light chain, EF-Hand p	98.59
KOG0030	152	consensus Myosin essential light chain, EF-Hand pr	98.58
KOG0034	187	consensus Ca2+/calmodulin-dependent protein phosph	98.57
smart00128	310	IPPc Inositol polyphosphate phosphatase, catalytic	98.49
cd05024	91	S-100A10 S-100A10: A subgroup of the S-100A10 doma	98.42
KOG0036	463	consensus Predicted mitochondrial carrier protein	98.26
KOG0377	631	consensus Protein serine/threonine phosphatase RDG	98.25
PF00036	29	EF-hand_1: EF hand; InterPro: IPR018248 Many calci	98.23
PF00036	29	EF-hand_1: EF hand; InterPro: IPR018248 Many calci	98.23
KOG0038	189	consensus Ca2+-binding kinase interacting protein	98.07
PF13405	31	EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J	98.02
PLN02964	644	phosphatidylserine decarboxylase	98.02
PLN02964	644	phosphatidylserine decarboxylase	98.02
PF12763	104	EF-hand_4: Cytoskeletal-regulatory complex EF hand	97.98
KOG0044	193	consensus Ca2+ sensor (EF-Hand superfamily) [Signa	97.84
KOG4223	325	consensus Reticulocalbin, calumenin, DNA supercoil	97.82
PF14788	51	EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QA	97.76
KOG0044	193	consensus Ca2+ sensor (EF-Hand superfamily) [Signa	97.68
PF14529	119	Exo_endo_phos_2: Endonuclease-reverse transcriptas	97.67
PF13202	25	EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ	97.66
PF13202	25	EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ	97.61
KOG0046	627	consensus Ca2+-binding actin-bundling protein (fim	97.5
PRK12309	391	transaldolase/EF-hand domain-containing protein; P	97.49
KOG0566	1080	consensus Inositol-1,4,5-triphosphate 5-phosphatas	97.39
KOG4223	325	consensus Reticulocalbin, calumenin, DNA supercoil	97.37
PF10591	113	SPARC_Ca_bdg: Secreted protein acidic and rich in	97.35
PF13405	31	EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J	97.04
KOG4065	144	consensus Uncharacterized conserved protein [Funct	97.0
KOG0040	2399	consensus Ca2+-binding actin-bundling protein (spe	96.92
KOG1294	335	consensus Apurinic/apyrimidinic endonuclease and r	96.77
KOG4251	362	consensus Calcium binding protein [General functio	96.62
smart00054	29	EFh EF-hand, calcium binding motif. EF-hands are c	96.11
PF09279	83	EF-hand_like: Phosphoinositide-specific phospholip	95.79
KOG0377	631	consensus Protein serine/threonine phosphatase RDG	95.73
smart00054	29	EFh EF-hand, calcium binding motif. EF-hands are c	95.65
KOG0034	187	consensus Ca2+/calmodulin-dependent protein phosph	95.49
KOG2643	489	consensus Ca2+ binding protein, contains EF-hand m	95.27
KOG2243	5019	consensus Ca2+ release channel (ryanodine receptor	95.2
PF13833	54	EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A	95.18
PTZ00312	356	inositol-1,4,5-triphosphate 5-phosphatase; Provisi	93.77
PF13499	66	EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A	93.76
KOG1029	1118	consensus Endocytic adaptor protein intersectin [S	93.61
KOG2643	489	consensus Ca2+ binding protein, contains EF-hand m	92.81
PF08726	69	EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPr	92.61
KOG0042	680	consensus Glycerol-3-phosphate dehydrogenase [Ener	92.11
COG5411	460	Phosphatidylinositol 5-phosphate phosphatase [Sign	91.85
PF05042	174	Caleosin: Caleosin related protein; InterPro: IPR0	91.54
KOG1976	391	consensus Inositol polyphosphate 5-phosphatase, ty	91.5
KOG4666	412	consensus Predicted phosphate acyltransferase, con	90.79
KOG4578	421	consensus Uncharacterized conserved protein, conta	90.71
PF05517	154	p25-alpha: p25-alpha ; InterPro: IPR008907 This fa	90.61
KOG3866	442	consensus DNA-binding protein of the nucleobindin	90.53
cd05022	89	S-100A13 S-100A13: S-100A13 domain found in protei	90.5
KOG1029	1118	consensus Endocytic adaptor protein intersectin [S	90.38
KOG1955	737	consensus Ral-GTPase effector RALBP1 [Intracellula	90.17
KOG3555	434	consensus Ca2+-binding proteoglycan Testican [Gene	89.68
cd05026	93	S-100Z S-100Z: S-100Z domain found in proteins sim	88.99
PLN03191	621	Type I inositol-1,4,5-trisphosphate 5-phosphatase	88.92
cd00252	116	SPARC_EC SPARC_EC; extracellular Ca2+ binding doma	88.44
cd05030	88	calgranulins Calgranulins: S-100 domain found in p	88.28
cd05023	89	S-100A11 S-100A11: S-100A11 domain found in protei	88.0
KOG4666	412	consensus Predicted phosphate acyltransferase, con	87.34
KOG2562	493	consensus Protein phosphatase 2 regulatory subunit	87.14
KOG4251	362	consensus Calcium binding protein [General functio	86.65
cd05029	88	S-100A6 S-100A6: S-100A6 domain found in proteins	86.62
cd05031	94	S-100A10_like S-100A10_like: S-100A10 domain found	85.89
PF14788	51	EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QA	85.89
cd05024	91	S-100A10 S-100A10: A subgroup of the S-100A10 doma	85.63
smart00027	96	EH Eps15 homology domain. Pair of EF hand motifs t	85.01
PRK12309	391	transaldolase/EF-hand domain-containing protein; P	84.78
cd05025	92	S-100A1 S-100A1: S-100A1 domain found in proteins	84.56
KOG2562	493	consensus Protein phosphatase 2 regulatory subunit	83.6
cd00051	63	EFh EF-hand, calcium binding motif; A diverse supe	83.2
cd05027	88	S-100B S-100B: S-100B domain found in proteins sim	82.65
cd00052	67	EH Eps15 homology domain; found in proteins implic	81.82
KOG0169	746	consensus Phosphoinositide-specific phospholipase	81.65

>PLN03144 Carbon catabolite repressor protein 4 homolog; Provisional

Probab=99.98  E-value=2e-31  Score=270.29  Aligned_cols=198  Identities=24%  Similarity=0.387  Sum_probs=149.2

Q ss_pred             CCceeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhhhcCCc
Q 013259           27 QPCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYV  106 (447)
Q Consensus        27 ~~~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~  106 (447)
                      ..+||||||||+++.|++.+.+ ++|  +...+.|.+|+..|++.|..++|||||||||  ..+++.+.+...|..+||.
T Consensus       252 ~~~frVmSYNILAd~ya~~dly-~yc--p~~aL~W~yRk~lIl~EI~~~~aDIICLQEV--~~~~~~d~~~p~L~~~GY~  326 (606)
T PLN03144        252 AGTFTVLSYNILSDLYATSDMY-SYC--PPWALSWTYRRQNLLREIVGYRADILCLQEV--QSDHFEEFFAPELDKHGYQ  326 (606)
T ss_pred             CCCEEEEEeeeccccccCcccc-cCC--CccccCHHHHHHHHHHHHHhcCCCEEEEeec--CHHHHHHHHHhhhhhcCce
Confidence            5689999999999988876533 455  4578899999999999999999999999999  4556777888889999999


Q ss_pred             EEEecCCCC-------CCceEEEEEecCCceEeeeEEEEecCCC-----Cchh------hhhhh--cccccccccccC--
Q 013259          107 NFKLARTNN-------RGDGLLTAVHKDYFRVVNYRDLLFNDFG-----DRVA------QLLHV--ELIDPFSQCRNG--  164 (447)
Q Consensus       107 ~~~~~~~~~-------~~~G~ai~~rs~~~~i~~~~~~~~~~~~-----~~~~------~~~~l--~~~~~~~~~~~~--  164 (447)
                      .++..+++.       ..+|+|||||+++|.+++...+.|....     ....      ....+  .....+...+..  
T Consensus       327 Gv~~~Kt~~~~~~~~~~~DGcAIFyr~drFeLv~~~~ief~~~~lslt~~~~~s~~~~~~l~Rl~kdNVAliv~Le~k~~  406 (606)
T PLN03144        327 ALYKKKTTEVYTGNTYVIDGCATFFRRDRFSLVKKYEVEFNKAAQSLTEALIPSAQKKAALNRLLKDNVALIVVLEAKFG  406 (606)
T ss_pred             EEEeCCCCccccccccCCceeEEEEECcceEEEEeeeeeccchhhccCccccccccchhhhhhhccCcEEEEEEEEEecc
Confidence            988766532       4679999999999999999888664321     1000      00000  001111111111  


Q ss_pred             -------CCCCeEEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCCchhHhhhh
Q 013259          165 -------DLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRS  234 (447)
Q Consensus       165 -------~~g~~l~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~  234 (447)
                             ..++.|+|+||||+|.+  .....|+.|+..|++.++++...   .+.|+|||||||+.|++.+|+.|..
T Consensus       407 ~~~~~~~~~~~~l~VaNTHL~~~p--~~~dvRl~Q~~~Ll~~l~~~~~~---~~~PvIlcGDFNS~P~S~vy~lLt~  478 (606)
T PLN03144        407 NQGADNGGKRQLLCVANTHIHANQ--ELKDVKLWQVHTLLKGLEKIAAS---ADIPMLVCGDFNSVPGSAPHCLLAT  478 (606)
T ss_pred             cccccCCCCccEEEEEEeeeccCC--ccchhHHHHHHHHHHHHHHHhhc---CCCceEEeccCCCCCCChhhhhhhc
Confidence                   23457999999998855  45678999999999999887543   4789999999999999999998853

>KOG2338 consensus Transcriptional effector CCR4-related protein [Transcription]

Probab=99.97  E-value=2.4e-29  Score=242.23  Aligned_cols=376  Identities=29%  Similarity=0.365  Sum_probs=235.0

Q ss_pred             ceeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhhhcCCcEE
Q 013259           29 CITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNF  108 (447)
Q Consensus        29 ~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~  108 (447)
                      .|+||||||+++.+... ....+...+...+.|..|...|+..+..++|||||||||+  .+++...+.+.+..+||..+
T Consensus       116 ~ftvmSYNILAQ~l~~~-~~r~~~~~s~~~L~W~~R~~~Ll~EL~~~dpDIlCLQEVq--~d~~~~~~~~~~~~lGy~~~  192 (495)
T KOG2338|consen  116 DFTVMSYNILAQDLLRD-IRRLYFPESGPALKWLRRSQNLLNELKHYDPDVLCLQEVQ--EDHYPEFWQPLLGKLGYTGF  192 (495)
T ss_pred             ceEEEEehHhHHHHHHH-hHHhhccCChhhcchhHHhHHHHHHHhhcCCCeeeehhhh--hhhhHHHHHHHHhhcCceEE
Confidence            79999999999865221 1111234677899999999999999999999999999994  45677788888988999998


Q ss_pred             EecCCCCCCceEEEEEecCCceEeeeEEEEecCCCCchhhhhhhcccccccccccCC-CCCeEEEEEecccCCCCCCCch
Q 013259          109 KLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGD-LRQEILIVNTHLLFPHDSSLSL  187 (447)
Q Consensus       109 ~~~~~~~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~g~~l~v~n~HL~~~~~~~~~~  187 (447)
                      +..+...+..||||+|++.+|.++....+.+.+.....+...++.....+ .++... .++.+.|+||||.+++  ....
T Consensus       193 ~~r~t~~KthG~ai~w~~~~F~lv~~~~l~y~~~~~~l~n~~NV~lvv~l-~f~~~~~~sq~ilVanTHLl~np--~~~~  269 (495)
T KOG2338|consen  193 FKRRTGTKTHGVAILWHSAKFKLVNHSELNYFDSGSALANRDNVGLVVSL-EFRLVDESSQGILVANTHLLFNP--SRSD  269 (495)
T ss_pred             EEeccCCCCceEEEEEecccceecccchhhcccccchhhcccceeEEEEE-EecccCcccCceEEEeeeeeecC--cccc
Confidence            88778889999999999999999998888776543322222222111110 121222 3568999999999976  4567


Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCCchhHhhhhCCCcccccccccCCCCCCCceeecccCCCcccc
Q 013259          188 VRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRNHRGNICG  267 (447)
Q Consensus       188 ~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~g~~d~~~~~~~~~~~~~~tw~~~~~~~~~~~r  267 (447)
                      .|++|...|++.++++.+..+ ..-|+++|||||+.|.++.|..|.+.++.-.....+.  ......|.......| ...
T Consensus       270 vrL~Q~~iiL~~~~~~~~~~~-~~~pi~l~GDfNt~p~~~~y~fl~~~~l~~~~~~~~~--~e~s~~~~~~~~~~g-e~g  345 (495)
T KOG2338|consen  270 VRLAQVYIILAELEKMSKSSK-SHWPIFLCGDFNTEPDSPPYLFLTSGPLIYDGRAAHT--IEDSHRYVFSESRLG-EEG  345 (495)
T ss_pred             hhhHHHHHHHHHHHHHHhhcc-cCCCeEEecCCCCCCCCCcchhhhcCCceeccccccc--ccccccccccccccC-ccc
Confidence            799999999999999887543 4679999999999999999999988888744433331  122222322211111 111


Q ss_pred             ccceeccCcchhhhhhhhhhhHHHHhHHHHHHHhhhhhHHHHhhhhc-CCCCCCcccHHHHHHHHHHhccCCCCCCCCHH
Q 013259          268 VDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRASLTETDAFAFLK-ADNDGDYITYSGFCEALEQLNLTGHKHGLADE  346 (447)
Q Consensus       268 IDyI~~~~~~~~~~~~~~sw~~~v~~~~~~~~~~~~~~l~~~F~~~D-~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~  346 (447)
                      .               ...|..+++....-......-.-.++|...- ++.. =..+..|+....+++++..++..+.. 
T Consensus       346 ~---------------d~~~~~~~~s~~k~~~~~~s~~~~e~~t~~g~~~~~-~~~~~~~h~~~~~~~s~~s~g~~~~~-  408 (495)
T KOG2338|consen  346 E---------------DDEEESAAFSRGKGQLSQASIPKPEIFTATGDKNHL-VELTYSEHESLKVNVSLYSHGYGLVH-  408 (495)
T ss_pred             c---------------cchhhhhhhccCccccccccCCCccccccccccchh-HHHHHHHhhhhhcccceeeccccccc-
Confidence            1               1124444444333333111122222333221 1111 12334444442222222112233332 


Q ss_pred             HHHHHHHHcCCCCCceeehHHHHHHHhccCcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCC-CC
Q 013259          347 ETKDLWVQADIDGNGVVDYKEFQQRIWKTTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPEN-YS  425 (447)
Q Consensus       347 ~~~~~~~~~D~~~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~  425 (447)
                       .+...-  |.+..|..+|.+-.....+-......+...+-.  +.+   ....++++..-....+.+++++-||.+ +=
T Consensus       409 -~~~~~~--~~gep~vt~~~~~~~g~~dyif~~~~~~~~~~~--~~~---~~~~ikl~~~l~ip~~~e~~k~~~p~~~~~  480 (495)
T KOG2338|consen  409 -TENAWL--DRGEPGVTNYALTWKGTLDYIFYSPGDCKQSNR--EFE---EDEAIKLKGLLRIPSPQEMWKAGQPPNGRY  480 (495)
T ss_pred             -hhhccc--cCCCcceecHHhhhccceeeEEeccCcccccch--hhh---cccceeEEEEecCCCHHHhhccCCCCCCCC
Confidence             222222  777888888876553333322222222111111  111   133566777777778888989999988 55


Q ss_pred             CCCCcceeEEeeec
Q 013259          426 LSDHARLTVVFSPI  439 (447)
Q Consensus       426 ~~~~~~l~~~~~~~  439 (447)
                      -|||-.|.++|++.
T Consensus       481 ~SDH~aL~~~~~~~  494 (495)
T KOG2338|consen  481 GSDHIALVAQFSLV  494 (495)
T ss_pred             cccceEeeEeeEee
Confidence            69999999999873

>PRK11756 exonuclease III; Provisional

Probab=99.92  E-value=1.7e-24  Score=205.34  Aligned_cols=204  Identities=16%  Similarity=0.168  Sum_probs=128.4

Q ss_pred             eeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhhhcCCcEEE
Q 013259           30 ITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFK  109 (447)
Q Consensus        30 lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~~  109 (447)
                      |||+||||++.                     ..|...++++|.+.+||||||||++.....+..   ..+...||.+++
T Consensus         1 mri~T~Nv~g~---------------------~~~~~~i~~~i~~~~pDIi~LQE~~~~~~~~~~---~~~~~~gy~~~~   56 (268)
T PRK11756          1 MKFVSFNINGL---------------------RARPHQLEAIIEKHQPDVIGLQETKVHDEMFPL---EEVEALGYHVFY   56 (268)
T ss_pred             CEEEEEEcCCH---------------------HHHHHHHHHHHHhcCCCEEEEEecccccccCCH---HHHHhcCCEEEE
Confidence            69999999852                     135788999999999999999999644332221   123346887765


Q ss_pred             ecCCCCCCceEEEEEecCCceEeeeEEEEecCCC-CchhhhhhhcccccccccccCCCCCeEEEEEecccCCCCCC---C
Q 013259          110 LARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFG-DRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSS---L  185 (447)
Q Consensus       110 ~~~~~~~~~G~ai~~rs~~~~i~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~g~~l~v~n~HL~~~~~~~---~  185 (447)
                      ..  .....|+||+  |+ +|+..... .++... ......         ..+.+...++.+.|+|+|+..+....   .
T Consensus        57 ~~--~~~~~Gvail--Sr-~p~~~~~~-~~~~~~~~~~~r~---------l~~~i~~~~g~~~v~n~y~P~~~~~~~~~~  121 (268)
T PRK11756         57 HG--QKGHYGVALL--SK-QTPIAVRK-GFPTDDEEAQRRI---------IMATIPTPNGNLTVINGYFPQGESRDHPTK  121 (268)
T ss_pred             eC--CCCCCEEEEE--EC-CChHHeEE-CCCCccccccCCE---------EEEEEEcCCCCEEEEEEEecCCCCCCcchh
Confidence            42  3445799999  66 56654332 222111 111111         11223333445999999985432111   1


Q ss_pred             chhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCCc--------------------------hhHhhhhCCCcc
Q 013259          186 SLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGH--------------------------VYKFLRSQGFVS  239 (447)
Q Consensus       186 ~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~--------------------------~~~~l~~~g~~d  239 (447)
                      ...|.++...|.+.+.+..+    .+.|+|||||||+.|.+.                          .++.|...||+|
T Consensus       122 ~~~r~~~~~~l~~~l~~~~~----~~~pvIl~GDfN~~~~~~D~~~~~~~~~~~~~~~~~~~~~~er~~~~~l~~~~l~D  197 (268)
T PRK11756        122 FPAKRQFYQDLQNYLETELS----PDNPLLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWLDRLMDWGLVD  197 (268)
T ss_pred             HHHHHHHHHHHHHHHHHHhc----cCCCEEEEeecccCCChhhcCCcccChHHhcccCCccCCHHHHHHHHHHHhCCcEe
Confidence            12466777777777766533    567999999999987654                          445566779999


Q ss_pred             cccccccCCCCCCCceeecccC---CCccccccceeccCcc
Q 013259          240 SYDTAHQYTDADAHKWVSHRNH---RGNICGVDFIWLLNPN  277 (447)
Q Consensus       240 ~~~~~~~~~~~~~~tw~~~~~~---~~~~~rIDyI~~~~~~  277 (447)
                      +|+..++... ...||..++..   .+...||||||+++..
T Consensus       198 ~~R~~~p~~~-~~~T~~~~~~~~~~~~~g~RIDyi~~s~~~  237 (268)
T PRK11756        198 TFRQLNPDVN-DRFSWFDYRSKGFDDNRGLRIDLILATQPL  237 (268)
T ss_pred             ehhhhCCCCC-CcccCcCCcccccccCCceEEEEEEeCHHH
Confidence            9999887522 24566554421   1345799999997543

>TIGR03395 sphingomy sphingomyelin phosphodiesterase

Probab=99.91  E-value=1.1e-23  Score=199.49  Aligned_cols=218  Identities=15%  Similarity=0.162  Sum_probs=137.4

Q ss_pred             eeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHh-hhcCCcEE
Q 013259           30 ITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRL-SDAGYVNF  108 (447)
Q Consensus        30 lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l-~~~gy~~~  108 (447)
                      ||||||||+...+.           ......|..|.++|++.+...+|||||||||+.  ....+.+...| ..++|...
T Consensus         1 lkVmtyNv~~l~~~-----------~~~~~g~~~R~~~i~~~~~~~~~DVV~LQEv~~--~~~~~~l~~~L~~~yp~~~~   67 (283)
T TIGR03395         1 IKILSHNVYMLSTN-----------LYPNWGQMERADLIASADYIKNQDVVILNEAFD--TSASKRLLDNLREEYPYQTD   67 (283)
T ss_pred             CeEEEEEeeeeccc-----------ccCCccHhHHHHHHHHhhcccCCCEEEEecccc--hHHHHHHHHHHHhhCCceEe
Confidence            69999999963111           112234778999999999999999999999953  23233344444 34666543


Q ss_pred             EecCC--------------CCCCceEEEEEecCCceEeeeEEEEecCCCCchhhhhhhcccccccccccCCCCCeEEEEE
Q 013259          109 KLART--------------NNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVN  174 (447)
Q Consensus       109 ~~~~~--------------~~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~v~n  174 (447)
                      ..++.              .....|++|+  |+ +||.......|+.....- ..    ....+..+++..+|..+.|+|
T Consensus        68 ~~g~~~~g~~~~~g~~~~~~~~~~G~~iL--Sr-~Pi~~~~~~~f~~~~~~d-~~----~~kg~l~a~i~~~g~~~~v~~  139 (283)
T TIGR03395        68 VIGRSKKGWDKTLGNYSSSALEDGGVAIV--SK-WPIEEKIQYIFNKGCGAD-NL----SNKGFAYVKINKNGKKFHVIG  139 (283)
T ss_pred             ecccccccchhccccccccCccCCEEEEE--EC-CCccccEEEEccCCCCCc-cc----cCCceEEEEEecCCeEEEEEE
Confidence            22221              1234599999  99 899988777775322110 00    011223355566788999999


Q ss_pred             ecccCCCCC----CCchhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCCchhHhhhhC-CCcccccccccCCC
Q 013259          175 THLLFPHDS----SLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQ-GFVSSYDTAHQYTD  249 (447)
Q Consensus       175 ~HL~~~~~~----~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~-g~~d~~~~~~~~~~  249 (447)
                      |||.+....    .....|..|+..|.+++....   ...+.|+|||||||+.|.+..|+.|... +..+..     +. 
T Consensus       140 THL~~~~~~~~~~~~~~~R~~Q~~~i~~~i~~~~---~~~~~pvIl~GDfN~~~~s~~~~~ml~~l~~~~p~-----~~-  210 (283)
T TIGR03395       140 THLQAQDSMCSKLGPASIRANQLNEIQDFIDSKN---IPKDETVLIGGDLNVNKGSNEYHDMFKTLNVSEPR-----YV-  210 (283)
T ss_pred             eCCCCCcccccccccHHHHHHHHHHHHHHHhhcc---CCCCceEEEEeeCCCCCCCHHHHHHHHHhcccCCC-----cC-
Confidence            999774321    125679999999998886421   1146789999999999999999877543 222111     11 


Q ss_pred             CCCCceeeccc-------CCCccccccceeccCcc
Q 013259          250 ADAHKWVSHRN-------HRGNICGVDFIWLLNPN  277 (447)
Q Consensus       250 ~~~~tw~~~~~-------~~~~~~rIDyI~~~~~~  277 (447)
                      ....||....|       ..+...+|||||+++..
T Consensus       211 g~~~T~d~~~N~~a~~~~~~~~~~~lDyvl~~~~~  245 (283)
T TIGR03395       211 GVPATWDATTNSIAKYYYPKEEPEYLDYIFVSKSH  245 (283)
T ss_pred             CCCCCcCCCcCchhhhhcCCCCcceEEEEEEECCC
Confidence            12345544322       12335599999998553

Members of this family are bacterial proteins that act as sphingomyelin phosphodiesterase (EC 3.1.4.12), also called sphingomyelinase. Some members of this family have been shown to act as hemolysins.

>COG0708 XthA Exonuclease III [DNA replication, recombination, and repair]

Probab=99.90  E-value=1.1e-23  Score=191.74  Aligned_cols=205  Identities=23%  Similarity=0.383  Sum_probs=129.4

Q ss_pred             eeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhhhcCCcEEE
Q 013259           30 ITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFK  109 (447)
Q Consensus        30 lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~~  109 (447)
                      |||+||||.+.                     ..|.+.+.+++.+.+||||||||++..++++..   ..+...||+.++
T Consensus         1 mkI~SwNVNgi---------------------Rar~~~~~~~l~~~~pDVlclQEtK~~~~~fp~---~~~~~~GY~~~~   56 (261)
T COG0708           1 MKIASWNVNGL---------------------RARLKKLLDWLEEEQPDVLCLQETKAQDEQFPR---EELEALGYHHVF   56 (261)
T ss_pred             CeeEEEehhhH---------------------HHHHHHHHHHHHHhCCCEEEEEecccCcccCCH---hHHhhCCceEEE
Confidence            69999999963                     147888999999999999999999877766653   334457995544


Q ss_pred             ecCCCCCCceEEEEEecCCceEeeeEEEEecC--CCCchhhhhhhcccccccccccCCCCCeEEEEEecccCCCCCCCch
Q 013259          110 LARTNNRGDGLLTAVHKDYFRVVNYRDLLFND--FGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSL  187 (447)
Q Consensus       110 ~~~~~~~~~G~ai~~rs~~~~i~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~v~n~HL~~~~~~~~~~  187 (447)
                      .... .+..||||++|..   +.+ ....++.  ..+..++.+...             -..|.|+|+  |.|++.....
T Consensus        57 ~~gq-KgysGVailsr~~---~~~-v~~g~~~~~~~d~e~R~I~a~-------------~~~~~v~~~--Y~PnG~~~~~  116 (261)
T COG0708          57 NHGQ-KGYSGVAILSKKP---PDD-VRRGFPGEEEDDEEGRVIEAE-------------FDGFRVINL--YFPNGSSIGL  116 (261)
T ss_pred             ecCc-CCcceEEEEEccC---chh-hhcCCCCCccccccCcEEEEE-------------ECCEEEEEE--EcCCCCCCCC
Confidence            4222 5557999995444   221 1122222  111112221111             123899999  7776543233


Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCC-----------------------chhHhhhhCCCccccccc
Q 013259          188 VRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRG-----------------------HVYKFLRSQGFVSSYDTA  244 (447)
Q Consensus       188 ~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s-----------------------~~~~~l~~~g~~d~~~~~  244 (447)
                      .|..+-....+.+..++.+....+.|+|||||||..|..                       ..++.|...||+|+|+..
T Consensus       117 ~k~~yKl~f~~~l~~~l~~l~~~~~~~vl~GD~NIap~~iDv~~~~~~~~n~~~~~f~~eeR~~~~~ll~~G~~D~~R~~  196 (261)
T COG0708         117 EKFDYKLRFLDALRNYLEELLKKGKPVVLCGDFNIAPEEIDVANPKKRWLNEGNSGFLPEERAWFRRLLNAGFVDTFRLF  196 (261)
T ss_pred             cchHHHHHHHHHHHHHHHHHhhcCCCEEEecccccCCchhcccCchhhhhcCCCCCCCHHHHHHHHHHHHcchhhhhHhh
Confidence            444444444444444444333367899999999987541                       135567788999999999


Q ss_pred             ccCCCCCCCceeecccC---CCccccccceeccCcchhh
Q 013259          245 HQYTDADAHKWVSHRNH---RGNICGVDFIWLLNPNKYR  280 (447)
Q Consensus       245 ~~~~~~~~~tw~~~~~~---~~~~~rIDyI~~~~~~~~~  280 (447)
                      ++..+.  +||.+++..   ...+.||||+++++..+.+
T Consensus       197 ~p~~~~--YTwW~YR~~~~~~n~G~RID~~l~S~~L~~~  233 (261)
T COG0708         197 HPEPEK--YTWWDYRANAARRNRGWRIDYILVSPALADR  233 (261)
T ss_pred             CCCCCc--ccccccccchhhhcCceeEEEEEeCHHHHHH
Confidence            876443  666655522   2346799999997765443

>COG5239 CCR4 mRNA deadenylase, exonuclease subunit and related nucleases [RNA processing and modification]

Probab=99.86  E-value=1.5e-21  Score=181.05  Aligned_cols=198  Identities=24%  Similarity=0.338  Sum_probs=139.8

Q ss_pred             ceeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhhhcCCcEE
Q 013259           29 CITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNF  108 (447)
Q Consensus        29 ~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~  108 (447)
                      .++|||||++++.|+++.-+    +.+...+.|.+|.+.|++.|..++|||+|||||+  ...+.+.+.+.|...||...
T Consensus        30 ~ftimTYN~Laq~y~~r~~y----~~s~~aL~W~~R~~~L~~EL~~Yn~Di~CLQEvd--~~~~~~fw~~~l~~~gY~~i  103 (378)
T COG5239          30 DFTIMTYNVLAQTYATRKMY----PYSGWALKWSYRSRLLLQELLYYNADILCLQEVD--AEDFEDFWKDQLGKLGYDGI  103 (378)
T ss_pred             eeEEEehhhhhhhhcccccc----CCchhhhhhHHHHHHHHHHHhccCCceeeeehhh--hhHHHHHHHHHhcccccceE
Confidence            59999999999999988865    3345688999999999999999999999999994  45688899999999999988


Q ss_pred             EecCCC--------C--CCceEEEEEec----CCceEeeeEEEEe--cCCC-----------Cchhhhhhhccccccccc
Q 013259          109 KLARTN--------N--RGDGLLTAVHK----DYFRVVNYRDLLF--NDFG-----------DRVAQLLHVELIDPFSQC  161 (447)
Q Consensus       109 ~~~~~~--------~--~~~G~ai~~rs----~~~~i~~~~~~~~--~~~~-----------~~~~~~~~l~~~~~~~~~  161 (447)
                      +..+.+        .  ...||+|+++.    .++-++-.....|  +-..           +++.....+.+...+...
T Consensus       104 f~~k~~k~~~m~~~d~t~~dGc~if~k~~~~~sk~~li~~~~~~f~~p~~~~er~r~t~~~lnri~e~~~~~w~~l~~~l  183 (378)
T COG5239         104 FIPKERKVKWMIDYDTTKVDGCAIFLKRFIDSSKLGLILAVTHLFWHPYGYYERFRQTYILLNRIGEKDNIAWVCLFVGL  183 (378)
T ss_pred             EecCCCcccccccccccccceEEEEEEeccccchhhhhhhhhHhhcccceeehhhhHHHHHHHHHhhhhhcchhheeeee
Confidence            876554        1  34699999866    2222222111111  1100           111111222211122233


Q ss_pred             ccCCCCCeEEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHHHcCC-----------CCCcEEEeecCCCccCCchhH
Q 013259          162 RNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNL-----------KPIPIILCGDWNGSKRGHVYK  230 (447)
Q Consensus       162 ~~~~~g~~l~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~~~-----------~~~pvIl~GDFN~~p~s~~~~  230 (447)
                      ....+|..+.++|||++|.+  ......+-|...+.+.+++...+..+           +..++.+|||||+...+.+|.
T Consensus       184 ~n~e~gd~~~va~Th~~w~~--~~~dvk~iq~s~l~~~~k~~~~e~~~~d~~~~d~k~~~~~~~l~~gd~ns~~~s~vy~  261 (378)
T COG5239         184 FNKEPGDTPYVANTHLPWDP--KYRDVKLIQCSLLYRELKKVLKEELNDDKEEGDIKSYPEVDILITGDFNSLRASLVYK  261 (378)
T ss_pred             ccCCCCCceeEEeccccccC--CCCchheehhhHHHHHHHHHhhhcCCcchhccccccCcccccccCCCccceecceehh
Confidence            44557899999999999954  34566788888888888887765422           122679999999999998888


Q ss_pred             hhhh
Q 013259          231 FLRS  234 (447)
Q Consensus       231 ~l~~  234 (447)
                      .|..
T Consensus       262 ~l~~  265 (378)
T COG5239         262 FLVT  265 (378)
T ss_pred             hhhh
Confidence            8765

>KOG3873 consensus Sphingomyelinase family protein [Signal transduction mechanisms]

Probab=99.85  E-value=1.1e-21  Score=181.18  Aligned_cols=224  Identities=19%  Similarity=0.180  Sum_probs=156.2

Q ss_pred             CceeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHh-hhcCCc
Q 013259           28 PCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRL-SDAGYV  106 (447)
Q Consensus        28 ~~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l-~~~gy~  106 (447)
                      -.+||+|.|+|+..|.+..              ...|+..+.+.+.....||+.|||||... ++ ..|++.. ..|+|.
T Consensus         7 ~~lriltlN~Wgip~~Sk~--------------R~~Rm~~~g~~l~~E~yDiv~LQEvWs~e-D~-~~L~~~~ss~yPys   70 (422)
T KOG3873|consen    7 LELRILTLNIWGIPYVSKD--------------RRHRMDAIGDELASEKYDIVSLQEVWSQE-DF-EYLQSGCSSVYPYS   70 (422)
T ss_pred             heeeeeEeeccccccccch--------------hHHHHHHHhHHHhhcccchhhHHHHHHHH-HH-HHHHHhccccCchH
Confidence            3599999999986443322              22588999999999999999999998543 33 3344433 347887


Q ss_pred             EEEecCCCCCCceEEEEEecCCceEeeeEEEEecCCC--CchhhhhhhcccccccccccCCCCCeEEEEEecccCCCC--
Q 013259          107 NFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFG--DRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHD--  182 (447)
Q Consensus       107 ~~~~~~~~~~~~G~ai~~rs~~~~i~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~g~~l~v~n~HL~~~~~--  182 (447)
                      .++.  ++--+.|+++|  |+ +||+++....++-.+  ..+-....... ..+..+.+..+|..+.++||||+++-+  
T Consensus        71 h~FH--SGimGaGL~vf--SK-~PI~~t~~~~y~lNG~p~~i~rGDWf~G-K~Vgl~~l~~~g~~v~~yntHLHAeY~rq  144 (422)
T KOG3873|consen   71 HYFH--SGIMGAGLCVF--SK-HPILETLFHRYSLNGYPHAIHRGDWFGG-KGVGLTVLLVGGRMVNLYNTHLHAEYDRQ  144 (422)
T ss_pred             Hhhh--cccccCceEEe--ec-CchhhhhhhccccCCccceeeecccccc-ceeEEEEEeeCCEEeeeeehhcccccccc
Confidence            7664  34457899999  99 899988776665432  11111111111 111234455577889999999988643  


Q ss_pred             -CCCchhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCCchhHhhhhCCCcccccccccC--------------
Q 013259          183 -SSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQY--------------  247 (447)
Q Consensus       183 -~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~g~~d~~~~~~~~--------------  247 (447)
                       ..+...|..|+..+.++++...+    ...-||+|||||..|.+-.++.|...|++|+|...+..              
T Consensus       145 ~D~YL~HR~~QAwdlaqfi~~t~q----~~~vVI~~GDLN~~P~dl~~~ll~~a~l~daw~~~h~~q~e~~~~r~s~~~~  220 (422)
T KOG3873|consen  145 NDEYLCHRVAQAWDLAQFIRATRQ----NADVVILAGDLNMQPQDLGHKLLLSAGLVDAWTSLHLDQCESDSFRLSEDKE  220 (422)
T ss_pred             CchhhhHHHHHHHHHHHHHHHHhc----CCcEEEEecCCCCCccccceeeeeccchhhhHhhhchhhhcCcccccchhhh
Confidence             23566799999999999998765    56679999999999999999999989999999876532              


Q ss_pred             ------CCCCCCceeecccCCCc--cccccceeccCcc
Q 013259          248 ------TDADAHKWVSHRNHRGN--ICGVDFIWLLNPN  277 (447)
Q Consensus       248 ------~~~~~~tw~~~~~~~~~--~~rIDyI~~~~~~  277 (447)
                            ++....+|+........  .+||||||+++..
T Consensus       221 l~~g~tcd~~~N~y~~aqk~~ddp~~~RiDYvl~k~~~  258 (422)
T KOG3873|consen  221 LVEGNTCDSPLNCYTSAQKREDDPLGKRIDYVLVKPGD  258 (422)
T ss_pred             hhcCCcccCcchhhhHHHhCCCCccceeeeEEEEcCcc
Confidence                  12234556643222222  5699999997653

>COG3568 ElsH Metal-dependent hydrolase [General function prediction only]

Probab=99.85  E-value=4.4e-21  Score=174.27  Aligned_cols=206  Identities=16%  Similarity=0.100  Sum_probs=127.6

Q ss_pred             ceeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcEEEEcccccC----hhhHHHHHHHHhhhcC
Q 013259           29 CITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVG----NEELVDMYEKRLSDAG  104 (447)
Q Consensus        29 ~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DII~LQEv~~~----~~~~~~~l~~~l~~~g  104 (447)
                      .++|+||||+...            ..   ..+..+.+.+++.|.+..+|||||||+...    ...+.++........+
T Consensus         9 ~~~v~TyNih~~~------------~~---~d~r~~~~r~~~~i~~~~~Div~LQEv~~~~~~~r~~~~~~~~~~~~~~~   73 (259)
T COG3568           9 RFKVLTYNIHKGF------------GA---FDRRFDLPRIAEVIREVGADIVALQEVDGAFGRHRDGLLDLPHLLGRLGL   73 (259)
T ss_pred             eeEEEEEEEEEcc------------Cc---cCceecHHHHHHHHHhhccCeeeeecccccccccccccchhHHHHHHhcC
Confidence            3899999999531            11   123456899999999999999999999631    1222232222222223


Q ss_pred             CcEEEecC-----CCCCCceEEEEEecCCceEeeeEEEEecCC---CCchhhhhhhcccccccccccCC-CCCeEEEEEe
Q 013259          105 YVNFKLAR-----TNNRGDGLLTAVHKDYFRVVNYRDLLFNDF---GDRVAQLLHVELIDPFSQCRNGD-LRQEILIVNT  175 (447)
Q Consensus       105 y~~~~~~~-----~~~~~~G~ai~~rs~~~~i~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~-~g~~l~v~n~  175 (447)
                      ..+.+...     ......|++|+  |+ +|+.......++..   ..+.+..           +.+.. .|++|.|+|+
T Consensus        74 ~~~~~~~~~~~a~~~~~~~GnaiL--S~-~pi~~v~~~~lp~~~~~~~Rgal~-----------a~~~~~~g~~l~V~~~  139 (259)
T COG3568          74 APYWWSGAAFGAVYGEGQHGNAIL--SR-LPIRDVENLALPDPTGLEPRGALL-----------AEIELPGGKPLRVINA  139 (259)
T ss_pred             CccccchhhhhhhcccceeeeEEE--ec-CcccchhhccCCCCCCCCCceeEE-----------EEEEcCCCCEEEEEEE
Confidence            22222111     23345699999  66 88888888877753   2232222           22333 4789999999


Q ss_pred             cccCCCCCCCchhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCCchhHhhhhCCC--cccccc-cccCCCCCC
Q 013259          176 HLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGF--VSSYDT-AHQYTDADA  252 (447)
Q Consensus       176 HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~g~--~d~~~~-~~~~~~~~~  252 (447)
                      ||.+     ....|..|+..|++.+.-     . ...|+|+|||||..|.++.|+.....-+  ..+... .........
T Consensus       140 HL~l-----~~~~R~~Q~~~L~~~~~l-----~-~~~p~vl~GDFN~~p~s~~yr~~~~~~~~~~~~~~~~~~~a~~~~~  208 (259)
T COG3568         140 HLGL-----SEESRLRQAAALLALAGL-----P-ALNPTVLMGDFNNEPGSAEYRLAARSPLNAQAALTGAFAPAVGRTI  208 (259)
T ss_pred             eccc-----cHHHHHHHHHHHHhhccC-----c-ccCceEEEccCCCCCCCccceeccCCchhhccccccccCcccCccc
Confidence            9953     446699999999882211     1 2239999999999999999966543311  111111 111111223


Q ss_pred             CceeecccCCCccccccceeccCcch
Q 013259          253 HKWVSHRNHRGNICGVDFIWLLNPNK  278 (447)
Q Consensus       253 ~tw~~~~~~~~~~~rIDyI~~~~~~~  278 (447)
                      .+|+++.+    ..+|||||+++...
T Consensus       209 ~tfps~~p----~lriD~Ifvs~~~~  230 (259)
T COG3568         209 RTFPSNTP----LLRLDRIFVSKELA  230 (259)
T ss_pred             CCCCCCCc----cccccEEEecCccc
Confidence            57887775    34899999987543

>PRK13911 exodeoxyribonuclease III; Provisional

Probab=99.85  E-value=1.6e-20  Score=174.66  Aligned_cols=200  Identities=20%  Similarity=0.307  Sum_probs=121.0

Q ss_pred             eeEEecccccccccCCCCCCCCCCCCCccCChhhHH-HHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhhhcCCcEE
Q 013259           30 ITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRN-QRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNF  108 (447)
Q Consensus        30 lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~-~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~  108 (447)
                      |||+||||.+.            +         .|. +.+.++|.+++||||||||++.....+.      +...||..+
T Consensus         1 mki~swNVNgi------------r---------~~~~~~~~~~l~~~~~DIiclQEtK~~~~~~~------~~~~gY~~~   53 (250)
T PRK13911          1 MKLISWNVNGL------------R---------ACMTKGFMDFFNSVDADVFCIQESKMQQEQNT------FEFKGYFDF   53 (250)
T ss_pred             CEEEEEEeCCh------------h---------HhhhhhHHHHHHhcCCCEEEEEeecccccccc------cccCCceEE
Confidence            69999999963            1         133 3688999999999999999976554331      233588766


Q ss_pred             EecCCCCCCceEEEEEecCCceEeeeEEEEecCC-CCchhhhhhhcccccccccccCCCCCeEEEEEecccCCCCCCCch
Q 013259          109 KLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDF-GDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSL  187 (447)
Q Consensus       109 ~~~~~~~~~~G~ai~~rs~~~~i~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~g~~l~v~n~HL~~~~~~~~~~  187 (447)
                      .......+..|+||++|.....+.    ..+... .+..++.+.         +    .-+.++|+|+  |.|+.. ...
T Consensus        54 ~~~~~~kgy~GVAi~~k~~~~~v~----~~~~~~~~d~eGR~I~---------~----~~~~~~l~nv--Y~Pn~~-~~~  113 (250)
T PRK13911         54 WNCAIKKGYSGVVTFTKKEPLSVS----YGINIEEHDKEGRVIT---------C----EFESFYLVNV--YTPNSQ-QAL  113 (250)
T ss_pred             EEecccCccceEEEEEcCCchheE----EcCCCCcccccCCEEE---------E----EECCEEEEEE--EecCCC-CCC
Confidence            543333455699999665422221    111110 111122111         1    1236999999  777654 223


Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCC--------------------chhHhhhhCCCcccccccccC
Q 013259          188 VRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRG--------------------HVYKFLRSQGFVSSYDTAHQY  247 (447)
Q Consensus       188 ~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s--------------------~~~~~l~~~g~~d~~~~~~~~  247 (447)
                      .|..+-....+.+.++++.. ..+.|+|+|||||..+..                    ..++.+...||+|+|+..++.
T Consensus       114 ~r~~~K~~~~~~~~~~l~~l-~~~~~~Ii~GD~Nva~~~~D~~~~~~~~~~~gf~~~er~~f~~~l~~gl~D~~R~~~p~  192 (250)
T PRK13911        114 SRLSYRMSWEVEFKKFLKAL-ELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFSELLNAGFIDTFRYFYPN  192 (250)
T ss_pred             cchHHHHHHHHHHHHHHHhc-ccCCCEEEEccccCCCChhhccChhhcCCCCCcCHHHHHHHHHHHhcCCeehhhhhCCC
Confidence            36555544444444444433 245799999999987642                    125556667999999998865


Q ss_pred             CCCCCCceeecc---cCCCccccccceeccCcch
Q 013259          248 TDADAHKWVSHR---NHRGNICGVDFIWLLNPNK  278 (447)
Q Consensus       248 ~~~~~~tw~~~~---~~~~~~~rIDyI~~~~~~~  278 (447)
                      .. ...||.+++   ...+...|||||++++...
T Consensus       193 ~~-~~yTww~~~~~~~~~n~g~RIDyilvs~~~~  225 (250)
T PRK13911        193 KE-KAYTWWSYMQQARDKNIGWRIDYFLCSNPLK  225 (250)
T ss_pred             CC-CCCccCCCcCCccccCCcceEEEEEEChHHh
Confidence            32 235665433   1223456999999976543

>TIGR00195 exoDNase_III exodeoxyribonuclease III

Probab=99.84  E-value=2.1e-20  Score=175.86  Aligned_cols=200  Identities=19%  Similarity=0.309  Sum_probs=122.0

Q ss_pred             eeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhhhcCCcEEE
Q 013259           30 ITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFK  109 (447)
Q Consensus        30 lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~~  109 (447)
                      |||+||||++.            +         .+...++++|...+||||||||+......+.   ...+...||..++
T Consensus         1 mri~t~Ni~g~------------~---------~~~~~~~~~l~~~~~DIi~LQE~~~~~~~~~---~~~~~~~g~~~~~   56 (254)
T TIGR00195         1 MKIISWNVNGL------------R---------ARLHKGLAWLKENQPDVLCLQETKVQDEQFP---LEPFHKEGYHVFF   56 (254)
T ss_pred             CEEEEEEcCcH------------H---------HhHHHHHHHHHhcCCCEEEEEecccchhhCC---HHHhhcCCcEEEE
Confidence            79999999852            1         1345689999999999999999964332221   2333446887765


Q ss_pred             ecCCCCCCceEEEEEecCCceEeeeEEEEecCCCCchhhhhhhcccccccccccCCCCCeEEEEEecccCCCC--CCCch
Q 013259          110 LARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHD--SSLSL  187 (447)
Q Consensus       110 ~~~~~~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~v~n~HL~~~~~--~~~~~  187 (447)
                      ...  ....|+||++|...+.+..  .+.... .+..+..+.         +..    ..+.++|+|+.....  .....
T Consensus        57 ~~~--~g~~Gvailsr~~~~~~~~--~~~~~~-~~~~~r~i~---------~~~----~~~~l~~~~~p~~~~~~~~~~~  118 (254)
T TIGR00195        57 SGQ--KGYSGVAIFSKEEPLSVRR--GFGVEE-EDAEGRIIM---------AEF----DSFLVINGYFPNGSRDDSEKLP  118 (254)
T ss_pred             ecC--CCcceEEEEEcCCcceEEE--CCCCcc-cccCCCEEE---------EEE----CCEEEEEEEccCCCCCCCccHH
Confidence            533  4456999996543222211  111111 011111111         111    248999998854211  11223


Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCC--------------------chhHhhhhCCCcccccccccC
Q 013259          188 VRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRG--------------------HVYKFLRSQGFVSSYDTAHQY  247 (447)
Q Consensus       188 ~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s--------------------~~~~~l~~~g~~d~~~~~~~~  247 (447)
                      .|..+...+.+.+..+..    .+.|+|+|||||..+..                    ..++.+...|++|+|+..++.
T Consensus       119 ~r~~~~~~l~~~~~~~~~----~~~pvIi~GDfN~~~~~~d~~~~~~~~~~~~~~~~e~~~~~~l~~~~l~D~~r~~~~~  194 (254)
T TIGR00195       119 YKLQWLEALQNYLEKLVD----KDKPVLICGDMNIAPTEIDLHSPDENRNHTGFLPEEREWLDRLLEAGLVDTFRKFNPD  194 (254)
T ss_pred             HHHHHHHHHHHHHHHHHh----cCCcEEEEeecccCCChhhccChhhcCCCcCcChHHHHHHHHHHHcCCEeeecccCCC
Confidence            466666666666666533    46799999999998864                    246777778999999887764


Q ss_pred             CCCCCCceeecccC---CCccccccceeccCcc
Q 013259          248 TDADAHKWVSHRNH---RGNICGVDFIWLLNPN  277 (447)
Q Consensus       248 ~~~~~~tw~~~~~~---~~~~~rIDyI~~~~~~  277 (447)
                        ....||..++..   .+...||||||+++..
T Consensus       195 --~~~~T~~~~~~~~~~~~~g~RID~i~~s~~~  225 (254)
T TIGR00195       195 --EGAYSWWDYRTKARDRNRGWRIDYFLVSEPL  225 (254)
T ss_pred             --CCCCcccCCcCCccccCCceEEEEEEECHHH
Confidence              235677654421   1235699999996543

The model brings in reverse transcriptases at scores below 50, model also contains eukaryotic apurinic/apyrimidinic endonucleases which group in the same family

>TIGR00633 xth exodeoxyribonuclease III (xth)

Probab=99.83  E-value=4.1e-20  Score=174.04  Aligned_cols=201  Identities=20%  Similarity=0.306  Sum_probs=119.1

Q ss_pred             eeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHH-HHHHhhCCCcEEEEcccccChhhHHHHHHHHhhhcCCcEE
Q 013259           30 ITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRI-LDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNF  108 (447)
Q Consensus        30 lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i-~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~  108 (447)
                      |||+||||+...                     .+.+.+ +++|.+.+||||||||+......+   ....+...||.++
T Consensus         1 lri~t~Nv~g~~---------------------~~~~~~~~~~l~~~~~DIv~LQE~~~~~~~~---~~~~~~~~g~~~~   56 (255)
T TIGR00633         1 MKIISWNVNGLR---------------------ARLHKLFLDWLKEEQPDVLCLQETKVADEQF---PAELFEELGYHVF   56 (255)
T ss_pred             CEEEEEecccHH---------------------HHhhccHHHHHHhcCCCEEEEEeccCchhhC---CHhHhccCCceEE
Confidence            699999999631                     134555 899999999999999996432111   1222344688776


Q ss_pred             EecCCCCCCceEEEEEecCCceEeeeEE-EEecCCCCchhhhhhhcccccccccccCCCCCeEEEEEecccCCCC--CCC
Q 013259          109 KLARTNNRGDGLLTAVHKDYFRVVNYRD-LLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHD--SSL  185 (447)
Q Consensus       109 ~~~~~~~~~~G~ai~~rs~~~~i~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~v~n~HL~~~~~--~~~  185 (447)
                      +.........|+||+  ++ +++..... +.... .+..+..+.             ...+.+.|+++|+..+..  ...
T Consensus        57 ~~~~~~~~~~G~ail--sr-~~~~~~~~~~~~~~-~~~~~r~l~-------------~~~~~~~i~~vy~p~~~~~~~~~  119 (255)
T TIGR00633        57 FHGAKSKGYSGVAIL--SK-VEPLDVRYGFGGEE-HDEEGRVIT-------------AEFDGFTVVNVYVPNGGSRGLER  119 (255)
T ss_pred             EeecccCCcceEEEE--Ec-CCcceEEECCCCCc-ccCCCcEEE-------------EEECCEEEEEEEccCCCCCCchh
Confidence            654433345799999  44 34443221 11111 011111110             112469999998854321  111


Q ss_pred             chhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCC--------------------chhHhhhhCCCcccccccc
Q 013259          186 SLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRG--------------------HVYKFLRSQGFVSSYDTAH  245 (447)
Q Consensus       186 ~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s--------------------~~~~~l~~~g~~d~~~~~~  245 (447)
                      ...|..+...+.+.+.+...    .+.|+|+|||||+.+..                    ..++.+...|+.|+|+..+
T Consensus       120 ~~~r~~~~~~l~~~~~~~~~----~~~~~Il~GDFN~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~  195 (255)
T TIGR00633       120 LEYKLQFWDALFQYYEKELD----AGKPVIICGDMNVAHTEIDLGNPKENKGNAGFTPEEREWFDELLEAGLVDTFRHFN  195 (255)
T ss_pred             HHHHHHHHHHHHHHHHHHHh----cCCcEEEEeecccCCChHHccChhhcCCCCCcCHHHHHHHHHHHHcCCEecchhhC
Confidence            23466666666665544322    46699999999997642                    2366666789999998776


Q ss_pred             cCCCCCCCceeeccc---CCCccccccceeccCc
Q 013259          246 QYTDADAHKWVSHRN---HRGNICGVDFIWLLNP  276 (447)
Q Consensus       246 ~~~~~~~~tw~~~~~---~~~~~~rIDyI~~~~~  276 (447)
                      +... ...||...+.   ..+...||||||+++.
T Consensus       196 ~~~~-~~~T~~~~~~~~~~~~~~~rID~i~~s~~  228 (255)
T TIGR00633       196 PDTE-GAYTWWDYRSGARDRNRGWRIDYFLVSEP  228 (255)
T ss_pred             CCCC-CcCcCcCCccCccccCCceEEEEEEECHH
Confidence            5432 2456665442   1123468999999643

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PRK05421 hypothetical protein; Provisional

Probab=99.79  E-value=1.4e-18  Score=163.74  Aligned_cols=154  Identities=19%  Similarity=0.095  Sum_probs=89.7

Q ss_pred             CCceeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhhhcCCc
Q 013259           27 QPCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYV  106 (447)
Q Consensus        27 ~~~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~  106 (447)
                      .++||||||||+...            ..        +....++.| ..+|||||||||+... ...    ......++.
T Consensus        41 ~~~lri~t~NI~~~~------------~~--------~~~~~l~~l-~~~~DiI~LQEv~~~~-~~~----~~~~~~~~~   94 (263)
T PRK05421         41 EERLRLLVWNIYKQQ------------RA--------GWLSVLKNL-GKDADLVLLQEAQTTP-ELV----QFATANYLA   94 (263)
T ss_pred             CCceeEEEEEccccc------------cc--------cHHHHHHHh-ccCCCEEEEEecccCc-chH----HHhhcccch
Confidence            457899999999631            00        123455555 8899999999996432 111    222222333


Q ss_pred             EEE--ecCCCCCCceEEEEEecCCceEeeeEEEEecCCCCchhhhhhhcccccccccccCC-CCCeEEEEEecccCCCCC
Q 013259          107 NFK--LARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGD-LRQEILIVNTHLLFPHDS  183 (447)
Q Consensus       107 ~~~--~~~~~~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~g~~l~v~n~HL~~~~~~  183 (447)
                      +.+  ........+|+||+  |+ +|+.....+........        .......+.+.. +++.+.|+||||.++.. 
T Consensus        95 ~~~~~~~~~~~~~~GvaiL--SR-~pi~~~~~~~~~~~~~~--------~~r~~l~a~~~~~~g~~l~v~ntHl~~~~~-  162 (263)
T PRK05421         95 ADQAPAFVLPQHPSGVMTL--SK-AHPVYCCPLREREPWLR--------LPKSALITEYPLPNGRTLLVVNIHAINFSL-  162 (263)
T ss_pred             HHhccccccCCCccceeEe--ee-cccceeeccCCCCcccc--------CcceeEEEEEEeCCCCEEEEEEECccccCc-
Confidence            222  11123346799999  88 78876544411111000        000111122222 45679999999965321 


Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCC
Q 013259          184 SLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRG  226 (447)
Q Consensus       184 ~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s  226 (447)
                       ....|..|+..+.+.+..       ...|+|||||||+.+..
T Consensus       163 -~~~~r~~q~~~l~~~~~~-------~~~p~Il~GDFN~~~~~  197 (263)
T PRK05421        163 -GVDVYSKQLEPIGDQIAH-------HSGPVILAGDFNTWSRK  197 (263)
T ss_pred             -ChHHHHHHHHHHHHHHHh-------CCCCEEEEcccccCccc
Confidence             235588888888777654       35699999999997643

>PTZ00297 pantothenate kinase; Provisional

Probab=99.75  E-value=2e-17  Score=184.76  Aligned_cols=220  Identities=15%  Similarity=0.205  Sum_probs=129.2

Q ss_pred             CceeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhC-CCcEEEEcccccCh---------hhHHHHHH
Q 013259           28 PCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYE-RSSIICLQEFWVGN---------EELVDMYE   97 (447)
Q Consensus        28 ~~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~-~~DII~LQEv~~~~---------~~~~~~l~   97 (447)
                      ..||||||||+.+.     .   .+.      .|  ..+++...|... +|||||||||....         ..+...+.
T Consensus         9 ~~l~VlTyNv~~~~-----~---~~~------~~--~~~ri~~~i~~l~~~DIv~lQEvf~~~~~~~~~~~~~~~~~~~~   72 (1452)
T PTZ00297          9 AQARVLSYNFNILP-----R---GCG------GF--QHERIETFLASVDAYDVVLLQEVYAASVLPYFLQKQLCFQKMLV   72 (1452)
T ss_pred             CceEEEEEEccccC-----C---Ccc------cc--cHHHHHHHHHhccCCCEEEEecccccccccccccccchhhHHHH
Confidence            47999999998641     0   011      11  247777788884 78999999996321         11344556


Q ss_pred             HHhhhcCCcEEEecCCCC----------CCceEEEEEecCCceEeeeEEEEecCCCCchhhhhhhcccccccccccCC--
Q 013259           98 KRLSDAGYVNFKLARTNN----------RGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGD--  165 (447)
Q Consensus        98 ~~l~~~gy~~~~~~~~~~----------~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--  165 (447)
                      ..+...||.++...+...          ...|+||+  || |||.....+.++........     ..+.+..+.+..  
T Consensus        73 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~AIL--SR-~PI~~~~~~~l~~~~~~~~~-----~~RG~L~a~I~vp~  144 (1452)
T PTZ00297         73 DELKARGFHHYVISKQPSYLTMLRYNVCSDNGLIIA--SR-FPIWQRGSYTFRNHERGEQS-----VRRGCLFAEVEVPL  144 (1452)
T ss_pred             HHHHhcCCceeEeecCccccccccCccccCCEEEEE--EC-CChhhceeeecCcccccccc-----cccceEEEEEEccc
Confidence            667677888776544331          45699999  99 99999999888753211000     000111123322  


Q ss_pred             ---CCCeEEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHHHc-----CCCCCcEEEeecCCCc----c----CCchh
Q 013259          166 ---LRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEH-----NLKPIPIILCGDWNGS----K----RGHVY  229 (447)
Q Consensus       166 ---~g~~l~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~-----~~~~~pvIl~GDFN~~----p----~s~~~  229 (447)
                         +++.+.|+||||.+..+   ...|.+|+..+.++++......     ...+.|+|||||||+.    +    .+..|
T Consensus       145 ~~g~~~~v~v~~tHL~~~~~---~~~R~~Q~~ql~~~i~~~i~~~~~~~~~~~~~PvILaGDFN~~~~~~~~~~~~s~e~  221 (1452)
T PTZ00297        145 AEGGSQRIVFFNVHLRQEDS---LPSTSSQVQETRRFVESVIANVYEQNNDGAEIPFVIAGDFNINGIDPHNGGHPTKRF  221 (1452)
T ss_pred             cCCCCceEEEEEeCCCCCCC---cchHHHHHHHHHHHHHHhhhhhcccccCCCCCCEEEEeeCCCccccccccCCccHHH
Confidence               23589999999976432   2348889998888877522211     1245699999999965    2    33455


Q ss_pred             Hhhh------hCCCcccccccccCCCCCCC--ceeecccC----CCccccccceecc
Q 013259          230 KFLR------SQGFVSSYDTAHQYTDADAH--KWVSHRNH----RGNICGVDFIWLL  274 (447)
Q Consensus       230 ~~l~------~~g~~d~~~~~~~~~~~~~~--tw~~~~~~----~~~~~rIDyI~~~  274 (447)
                      +.|.      ..++.+.+...+....++++  +|.....+    .....||||||++
T Consensus       222 ~~ml~~l~~~~~~l~dv~~~~~~~~~~T~p~~~~fP~~~p~~~~~~~~~riD~Ifv~  278 (1452)
T PTZ00297        222 QELLNELQDLGSGVREVIYDETGQHPPTRPPILFFPEQSKLERYSSTPQRQDYFFVT  278 (1452)
T ss_pred             HHHHHHhhhccccHhHHhHhhcCCCCCCCCccccccccCccccccCCCcceeEEEEe
Confidence            4443      22455555444433222222  22121111    1112489999965

>smart00476 DNaseIc deoxyribonuclease I

Probab=99.74  E-value=1.6e-16  Score=148.57  Aligned_cols=169  Identities=15%  Similarity=0.091  Sum_probs=106.0

Q ss_pred             CceeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhhh---cC
Q 013259           28 PCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSD---AG  104 (447)
Q Consensus        28 ~~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~---~g  104 (447)
                      ..|||+||||+.+.              +....|..|...|++.|+  .+|||++|||...+......+...|..   .+
T Consensus        16 ~~l~I~SfNIr~fg--------------d~k~~~~~r~~~i~~il~--~~DIiglQEV~d~q~~~l~~ll~~Ln~~~~~~   79 (276)
T smart00476       16 ASLRICAFNIQSFG--------------DSKMSNATLMSIIVKILS--RYDIALVQEVRDSDLSAVPKLMDQLNSDSPNT   79 (276)
T ss_pred             CcEEEEEEECcccC--------------CccccHHHHHHHHHHHhc--cCCEEEEEEeecchhHHHHHHHHHHhhcCCCC
Confidence            36999999999641              223468899999999998  789999999964332222222222322   36


Q ss_pred             CcEEEecCCCC--CCceEEEEEecCCceEeeeEEEEecCCCCchhhhhhhcccccccccccCC-CCCeEEEEEecccCCC
Q 013259          105 YVNFKLARTNN--RGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGD-LRQEILIVNTHLLFPH  181 (447)
Q Consensus       105 y~~~~~~~~~~--~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~g~~l~v~n~HL~~~~  181 (447)
                      |.++..++.+.  .++-.+++||++++.+++...+  ++.+.......  .....++..+... .++.|.++|+|+..  
T Consensus        80 Y~~v~s~r~gr~~~~E~~a~~Yr~drv~v~~~~~f--~d~~~~~~~~F--~ReP~~~~F~~~~~~~~~F~li~~H~~p--  153 (276)
T smart00476       80 YSYVSSEPLGRNSYKEQYLFLYRSDLVSVLDSYLY--DDGCECGNDVF--SREPFVVKFSSPSTAVKEFVIVPLHTTP--  153 (276)
T ss_pred             ceEEecCCCCCCCCCEEEEEEEecceEEEccccee--cCCCCCccccc--cccceEEEEEeCCCCCccEEEEEecCCh--
Confidence            77776554432  3467999999999998877554  44221000000  0001111122222 34689999999954  


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccC
Q 013259          182 DSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKR  225 (447)
Q Consensus       182 ~~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~  225 (447)
                           ..+.+++..|.+.+....+++  ...|+||+||||+.+.
T Consensus       154 -----~~~~~e~~aL~~v~~~~~~~~--~~~~villGDFNa~~~  190 (276)
T smart00476      154 -----EAAVAEIDALYDVYLDVRQKW--GTEDVIFMGDFNAGCS  190 (276)
T ss_pred             -----HHHHHHHHHHHHHHHHHHHhh--ccCCEEEEccCCCCCC
Confidence                 235667777776555544443  5789999999999764

Deoxyribonuclease I catalyzes the endonucleolytic cleavage of double-stranded DNA. The enzyme is secreted outside the cell and also involved in apoptosis in the nucleus.

>PF03372 Exo_endo_phos: Endonuclease/Exonuclease/phosphatase family Subset of Pfam family Subset of Pfam family; InterPro: IPR005135 This domain is found in a large number of proteins including magnesium dependent endonucleases and phosphatases involved in intracellular signalling []

Probab=99.71  E-value=8.2e-17  Score=149.45  Aligned_cols=150  Identities=21%  Similarity=0.236  Sum_probs=79.8

Q ss_pred             HHHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhhhcCC-cEEEecCCCC----CCceEEEEEecCCceEeeeEEEE
Q 013259           64 RNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGY-VNFKLARTNN----RGDGLLTAVHKDYFRVVNYRDLL  138 (447)
Q Consensus        64 R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy-~~~~~~~~~~----~~~G~ai~~rs~~~~i~~~~~~~  138 (447)
                      +...|++.|...+||||||||++.  ......+...+....+ ..........    ...|++|++|.............
T Consensus        17 ~~~~i~~~i~~~~~Dii~LQEv~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~r~~~~~~~~~~~~~   94 (249)
T PF03372_consen   17 KRREIAQWIAELDPDIIALQEVRN--DDLSELLEEQLRGYLGYYGSFWPGNSPPSDAGGYGVAILSRSPIFSSVSYVFSL   94 (249)
T ss_dssp             HHHHHHHHHHHHT-SEEEEEEEES--HHHHHHHHHHHHTCTTHEEEEEETSSSTTCSSSEEEEEEESSCCCEEEEEEEEE
T ss_pred             HHHHHHHHHHhcCCCEEEEecchh--hhhhhhhhhhcccccccccceeccccccccccCceEEEEEcccccccccccccc
Confidence            456699999999999999999952  2333444445544333 3333222221    35799999776532222222221


Q ss_pred             ecCCCCchhhhhhhcccccccccccCCCCCeEEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHHHcCCCCCcEEEee
Q 013259          139 FNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCG  218 (447)
Q Consensus       139 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~G  218 (447)
                      ..................    ......+.+|+|+|+|+.+     ....|..+...+.+.+....+..  ...|+||||
T Consensus        95 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~i~v~~~H~~~-----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~iv~G  163 (249)
T PF03372_consen   95 FSKPGIRIFRRSSKSKGI----VPVSINGKPITVVNVHLPS-----SNDERQEQWRELLARIQKIYADN--PNEPVIVMG  163 (249)
T ss_dssp             ESSSTTCEEEEEEEEEEE----EEEEEETEEEEEEEEETTS-----HHHHHHHHHHHHHHHHHHHHHTS--SCCEEEEEE
T ss_pred             cccccccccccccccccc----ccccccceEEEeeeccccc-----cchhhhhhhhhhhhhhhhccccc--ccceEEEEe
Confidence            211111110000000000    0000016789999999955     22345555667777777666532  233799999


Q ss_pred             cCCCccCC
Q 013259          219 DWNGSKRG  226 (447)
Q Consensus       219 DFN~~p~s  226 (447)
                      |||+.+.+
T Consensus       164 DfN~~~~~  171 (249)
T PF03372_consen  164 DFNSRPDS  171 (249)
T ss_dssp             E-SS-BSS
T ss_pred             ecccCCcc
Confidence            99998865

Proteins this domain is found in include: AP endonuclease proteins (4.2.99.18 from EC), DNase I proteins (3.1.21.1 from EC), Synaptojanin an inositol-1,4,5-trisphosphate phosphatase (3.1.3.56 from EC) and Sphingomyelinase (3.1.4.12 from EC).; PDB: 2J63_A 2JC4_A 3TEB_B 3MTC_A 3N9V_B 1ZWX_A 2F1N_A 1Y21_A 1NTF_A 2IMQ_X ....

>KOG0620 consensus Glucose-repressible alcohol dehydrogenase transcriptional effector CCR4 and related proteins [Transcription]

Probab=99.68  E-value=1.2e-16  Score=154.48  Aligned_cols=202  Identities=25%  Similarity=0.419  Sum_probs=135.5

Q ss_pred             CCCCceeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhhhcC
Q 013259           25 QQQPCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAG  104 (447)
Q Consensus        25 ~~~~~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~g  104 (447)
                      ++..+++|+|||++++.|.....+. +|  ......|.+|...+.+.|...+||+||||||    +.+.+.+...|...|
T Consensus        15 ~~~~~~~v~s~n~l~~~~~~~~~~~-~~--~~~~~~w~~r~~~~~~ei~~~~ad~icLqev----~~~~~~~~p~l~~~g   87 (361)
T KOG0620|consen   15 PQGETFTVLSYNILSQLYATSKLYM-YC--PSWALSWEYRRQLLLEEILNYNADILCLQEV----DRYHDFFSPELEASG   87 (361)
T ss_pred             cCCceEEeechhhhhhhhcccCCCc-cc--chhhccHHHHHHHHHHHHhCCCcceeecchh----hHHHHHccchhhhcC
Confidence            3344899999999998877766543 33  3456789999999999999999999999999    467788888888889


Q ss_pred             CcEEEecCC------CCCCceEEEEEecCCceEeeeEEEEecCCCC-----chhhhhh---hccccc-ccccccCCCCCe
Q 013259          105 YVNFKLART------NNRGDGLLTAVHKDYFRVVNYRDLLFNDFGD-----RVAQLLH---VELIDP-FSQCRNGDLRQE  169 (447)
Q Consensus       105 y~~~~~~~~------~~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~-----~~~~~~~---l~~~~~-~~~~~~~~~g~~  169 (447)
                      |...+..++      .....||||+++..+|.++....+.++....     .......   +..... ++.+... .+..
T Consensus        88 Y~g~~~~k~~~~~~~~~~~dGcaiffk~s~f~li~~~~i~~n~~~~~~~~~~~~~~~~~~~~d~~~~~l~~L~~~-~~~~  166 (361)
T KOG0620|consen   88 YSGIFIEKTRMGEVELEKIDGCAIFFKPSLFQLIHSSAIELNQLALSRLPPNIAQLNRLTTLDNSGNKLVSLKAE-LGNM  166 (361)
T ss_pred             CcceeecccccchhhcccCceeeeeecchHHhhhhhhhhhhHHHHHhhcchhHHHHHhhhccccccchhhhhhhh-cCCc
Confidence            999887764      4557899999999999998766665543321     1110000   000000 0001111 1222


Q ss_pred             EE----EEEecccCCCCCCCchhhHHHHHHHHHHHH----HHHHH-------cCCCCCcEEEeecCCCccCCchhHhhhh
Q 013259          170 IL----IVNTHLLFPHDSSLSLVRLHQVYKILQHVE----SYQKE-------HNLKPIPIILCGDWNGSKRGHVYKFLRS  234 (447)
Q Consensus       170 l~----v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~----~~~~~-------~~~~~~pvIl~GDFN~~p~s~~~~~l~~  234 (447)
                      +.    ++|+|+.+..  .....++-|+..+...+.    +....       .+....|+++|||||+.|.++.|..+..
T Consensus       167 ~~~~~~~~n~h~~~~~--~~~~vkl~qv~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~gdfNs~p~~~v~~~~~~  244 (361)
T KOG0620|consen  167 VSLPHLLLNTHILWDL--PYEDVKLFQVLTLLLELAPLSPEILKIYREGNLATRIASFPLLLCGDFNSTPLSPVYALLAS  244 (361)
T ss_pred             eeeccccccceeccCC--CccchHHHHHHHHhhcccccchhhhhhhccccccccccccceeeeccccCCCCccceeeccc
Confidence            22    4788888744  445668888887766532    11110       1224689999999999999998888744


Q ss_pred             CC
Q 013259          235 QG  236 (447)
Q Consensus       235 ~g  236 (447)
                      .+
T Consensus       245 ~~  246 (361)
T KOG0620|consen  245 GI  246 (361)
T ss_pred             CC
Confidence            33

>KOG2756 consensus Predicted Mg2+-dependent phosphodiesterase TTRAP [Signal transduction mechanisms]

Probab=99.63  E-value=4.3e-15  Score=132.30  Aligned_cols=207  Identities=15%  Similarity=0.137  Sum_probs=132.9

Q ss_pred             CceeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhhhcCCcE
Q 013259           28 PCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVN  107 (447)
Q Consensus        28 ~~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~  107 (447)
                      .-+.++||||...     +..           ....|+++++..|+-++|||||||||-   +...+.+.+ +. .-|..
T Consensus        98 ~~~S~~~WnidgL-----dln-----------~l~~RMrAv~H~i~l~sPdiiflQEV~---p~~y~~~~K-~~-s~y~i  156 (349)
T KOG2756|consen   98 SMFSLITWNIDGL-----DLN-----------NLSERMRAVCHYLALYSPDVIFLQEVI---PPYYSYLKK-RS-SNYEI  156 (349)
T ss_pred             cEEEEEEeecccc-----ccc-----------hHHHHHHHHHHHHHhcCCCEEEEeecC---chhhHHHHH-hh-hheeE
Confidence            4578888888863     211           123589999999999999999999993   233455555 22 13444


Q ss_pred             EEecCCCCCCceEEEEEecCCceEeeeEEEEecCCCCchhhhhhhcccccccccccCCCCCeEEEEEecccCCCCCCCch
Q 013259          108 FKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSL  187 (447)
Q Consensus       108 ~~~~~~~~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~v~n~HL~~~~~~~~~~  187 (447)
                      ++.  .....++.+++.+++ +.+.+...+.|+...   .       .+....+...+.|.++.+.|+||.++..  ..+
T Consensus       157 ~~~--~~~~~~~~~~l~~s~-~~Vks~~~i~F~NS~---M-------~R~L~I~Ev~v~G~Kl~l~tsHLEStr~--h~P  221 (349)
T KOG2756|consen  157 ITG--HEEGYFTAIMLKKSR-VKVKSQEIIPFPNSK---M-------MRNLLIVEVNVSGNKLCLMTSHLESTRG--HAP  221 (349)
T ss_pred             EEe--ccceeeeeeeeehhh-cCccccceeccCcch---h-------hheeEEEEEeecCceEEEEeccccCCCC--CCh
Confidence            443  222334666666666 888877777776532   1       1111224556678899999999998653  345


Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCCchhHhhhhCCCcccccccccCCCCCCCceeecccC--CCc-
Q 013259          188 VRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRNH--RGN-  264 (447)
Q Consensus       188 ~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~g~~d~~~~~~~~~~~~~~tw~~~~~~--~~~-  264 (447)
                      .|..|....++.++...+..  ++..||++||+|--.. ..-+.=...+++|+|..+.... ....||....+.  .|. 
T Consensus       222 ~r~~qF~~~~~k~~EaIe~l--PnA~ViFGGD~NlrD~-ev~r~~lPD~~vDvWE~lg~p~-~~~FTwDT~~N~nl~G~~  297 (349)
T KOG2756|consen  222 ERMNQFKMVLKKMQEAIESL--PNATVIFGGDTNLRDR-EVTRCGLPDNIVDVWEFLGKPK-HCQFTWDTQMNSNLGGTA  297 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHhC--CCceEEEcCcccchhh-hcccCCCCchHHHHHHHhCCCC-cCceeeecccCcccchhH
Confidence            68888887777777766654  7788999999997322 2222112447788888876332 345778765532  121 


Q ss_pred             --cccccceecc
Q 013259          265 --ICGVDFIWLL  274 (447)
Q Consensus       265 --~~rIDyI~~~  274 (447)
                        ..|+|.||.+
T Consensus       298 a~k~RfDRi~~r  309 (349)
T KOG2756|consen  298 ACKLRFDRIFFR  309 (349)
T ss_pred             HHHHHHHHHhhh
Confidence              2388998874

>PRK15251 cytolethal distending toxin subunit CdtB; Provisional

Probab=99.54  E-value=4.5e-14  Score=129.74  Aligned_cols=197  Identities=14%  Similarity=0.055  Sum_probs=109.0

Q ss_pred             CceeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhC-CCcEEEEcccccChhh------HHHH-----
Q 013259           28 PCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYE-RSSIICLQEFWVGNEE------LVDM-----   95 (447)
Q Consensus        28 ~~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~-~~DII~LQEv~~~~~~------~~~~-----   95 (447)
                      ..++|+|||+++...             ....+|..   .+...|... ++||+++||+..-...      ....     
T Consensus        23 ~~~~~~twn~qg~s~-------------~~~~kw~~---~v~~l~~~~~~~DIla~QEags~p~~a~~~~~~~~~~g~~~   86 (271)
T PRK15251         23 EDYKVATWNLQGSSA-------------STESKWNV---NVRQLLSGENPADILMVQEAGSLPSSAVPTGRHVQPGGVGI   86 (271)
T ss_pred             ccceEEEeecCCCCC-------------CChhhhhh---hHHHHhcCCCCCCEEEEEecCCCcccccccccccccccccc
Confidence            359999999996311             11123432   355566654 6999999999411100      0000     


Q ss_pred             -HHH---Hhh---hcCCcEEEecCCC--CCCceEEEEEecCCceEeeeEEEEecCCCCchhhhhhhcccccccccccCCC
Q 013259           96 -YEK---RLS---DAGYVNFKLARTN--NRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDL  166 (447)
Q Consensus        96 -l~~---~l~---~~gy~~~~~~~~~--~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  166 (447)
                       ..+   .+.   +-++.|+|..+-.  ....|+||+  || ++..+...+.++....+...           ..++  +
T Consensus        87 ~v~ey~w~l~~~srpgm~YiY~~aiD~~ggr~glAIl--Sr-~~a~~~~~l~~p~~~~Rpil-----------gi~i--~  150 (271)
T PRK15251         87 PIDEYTWNLGTRSRPNQVYIYYSRVDVGANRVNLAIV--SR-RRADEVIVLRPPTVASRPII-----------GIRI--G  150 (271)
T ss_pred             CcccEEEEccCccCCCceEEEEecccCCCCceeEEEE--ec-ccccceEEecCCCCcccceE-----------EEEe--c
Confidence             000   010   1234444443322  344699999  88 67766665554422211111           1222  2


Q ss_pred             CCeEEEEEecccCCCCCCCchhhHHHHHHHHHHHH-HHHHHcCCCCCcEEEeecCCCccCCchhHhhhhCCCcccccccc
Q 013259          167 RQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVE-SYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAH  245 (447)
Q Consensus       167 g~~l~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~-~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~g~~d~~~~~~  245 (447)
                        .+.++++|+.+..    ...|.++++.+.+... ..      +..|++||||||..|++..+..+.+. +......  
T Consensus       151 --~~~ffstH~~a~~----~~da~aiV~~I~~~f~~~~------~~~pw~I~GDFNr~P~sl~~~l~~~~-~~~~~~i--  215 (271)
T PRK15251        151 --NDVFFSIHALANG----GTDAGAIVRAVHNFFRPNM------RHINWMIAGDFNRSPDRLESTLDTEH-LRNRVNI--  215 (271)
T ss_pred             --CeEEEEeeecCCC----CccHHHHHHHHHHHHhhcc------CCCCEEEeccCCCCCcchhhhhcchh-cccccEE--
Confidence              3799999997642    2337788888877775 21      45799999999999999866665321 2211111  


Q ss_pred             cCCCCCCCceeecccCCCccccccceeccCcchhh
Q 013259          246 QYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYR  280 (447)
Q Consensus       246 ~~~~~~~~tw~~~~~~~~~~~rIDyI~~~~~~~~~  280 (447)
                        ..++.+|++       ...+||||+..+.....
T Consensus       216 --v~p~~pT~~-------s~~~IDYiv~~~s~~~~  241 (271)
T PRK15251        216 --VAPTEPTQR-------SGGTLDYAVTGNSNQTF  241 (271)
T ss_pred             --eCCCCCCCC-------CCCeeEEEEecCccccc
Confidence              123334443       13479999986554433

>COG2374 Predicted extracellular nuclease [General function prediction only]

Probab=99.38  E-value=5.1e-12  Score=128.07  Aligned_cols=255  Identities=13%  Similarity=0.154  Sum_probs=151.4

Q ss_pred             cCCCCceeEEecccccccccCCCCCC------CCCCCCCccCChhhHHHHHHHHHhhCCCcEEEEcccccCh----h--h
Q 013259           24 HQQQPCITCTTFNILAPIYKRLSNED------QNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGN----E--E   91 (447)
Q Consensus        24 ~~~~~~lrV~T~NV~~~~~~~~~~~~------~~~~~~~~~~~~~~R~~~i~~~I~~~~~DII~LQEv~~~~----~--~   91 (447)
                      ....+.|||.+|||++.. +..+...      ..|+...........+..++..|...++|||+|-|+.+..    .  .
T Consensus       458 ~~v~G~LkiasfNVlNyf-~~~~~~g~~~~~~~d~rga~~~~e~~~Q~~k~v~ai~~ldaDV~GL~Eien~~~~~~s~~a  536 (798)
T COG2374         458 PDVGGSLKIASFNVLNYF-NKLSGDGGGASTFSDCRGANTTEEFARQRAKIVTAILTLDADVLGLMEIENNGYGTDSGDA  536 (798)
T ss_pred             cccCceeeeeeeehhhhh-ccCCCCCCCccccccccCccchhHHHHHHHHHHHHHhhcchhhheeeeeeccCCCCCcHHH
Confidence            344678999999999742 1111111      1234444444566677889999999999999999996331    1  2


Q ss_pred             ---HHHHHHHHhhhc-CCcEEEecCCC---CCCceEEEEEecCCceEeeeEEEEecCCCCchhhhhhhc-cccccccccc
Q 013259           92 ---LVDMYEKRLSDA-GYVNFKLARTN---NRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVE-LIDPFSQCRN  163 (447)
Q Consensus        92 ---~~~~l~~~l~~~-gy~~~~~~~~~---~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~  163 (447)
                         ....|.+.+..- -|.++...+..   ....+++++|+..+..+.....+.-.+.-..+.....-. ........+.
T Consensus       537 i~~lV~~lna~~G~~~~y~~v~p~~~~~lgtD~I~vg~iY~~~~V~~~g~~~~~~~~a~~~v~~~~~~n~R~~laqtF~~  616 (798)
T COG2374         537 IAQLVNALNAKAGAGTRYAFVAPGRNGGLGTDAIRVGFIYKPSAVSLVGKAAIVDNDAFLGVGEIDDNNARPPLAQTFQD  616 (798)
T ss_pred             HHHHHHHHHhhcCCCceEEEEecCccCCcCCCceeEEEEeccceEEecccccccccccccccccccccccCcchhhhhhh
Confidence               233333334333 35544433321   122478999998876666544332111111000000000 0000112344


Q ss_pred             CCCCCeEEEEEecccCCCC------------CCCchhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCCchhHh
Q 013259          164 GDLRQEILIVNTHLLFPHD------------SSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKF  231 (447)
Q Consensus       164 ~~~g~~l~v~n~HL~~~~~------------~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~  231 (447)
                      ...+.+|+++..||.+...            ..+...|.+|++.|..+++.....  ..+.|++|.||||+...+.+++.
T Consensus       617 ~~~~ekfvvVvNHfkSKgs~~p~~gd~~dgQg~~~~~R~~~AqaL~~~la~~~~~--~~d~~~viLGD~N~y~~edpI~~  694 (798)
T COG2374         617 LSGGEKFVVVVNHFKSKGSDCPVDGDTQDGQGNSNQTRVRAAQALAAFLATNPTG--KADADIVILGDFNDYAFEDPIQA  694 (798)
T ss_pred             ccCCcEEEEEEeeecccCCCCCCcccccccccchhhHHHHHHHHHHHHHhhCccc--ccCCCEEEEeccchhhhccHHHH
Confidence            4567789999999987432            134667999999999999864322  25778999999999999999999


Q ss_pred             hhhCCCcccccccccCCCCCCCceeecccCCCccccccceeccCcchhhhhhhhhh
Q 013259          232 LRSQGFVSSYDTAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASW  287 (447)
Q Consensus       232 l~~~g~~d~~~~~~~~~~~~~~tw~~~~~~~~~~~rIDyI~~~~~~~~~~~~~~sw  287 (447)
                      |...|+...-...+..  ++.++|...    |+...|||++++..-.++......|
T Consensus       695 l~~aGy~~l~~~~~~~--~~~YSY~f~----G~~gtLDhaLas~sl~~~v~~a~ew  744 (798)
T COG2374         695 LEGAGYMNLAARFHDA--GDRYSYVFN----GQSGTLDHALASASLAAQVSGATEW  744 (798)
T ss_pred             HhhcCchhhhhhccCC--CCceEEEEC----CccchHhhhhhhhhhhhhccCceee
Confidence            9988876433333211  223333333    4466899999976655555444445

>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13

Probab=99.35  E-value=1.9e-12  Score=99.74  Aligned_cols=68  Identities=26%  Similarity=0.304  Sum_probs=62.1

Q ss_pred             HhhhhhHHHHhhhhcC-CCCCCcccHHHHHHHHHH-hccCCCCCCCCH-HHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          300 RRASLTETDAFAFLKA-DNDGDYITYSGFCEALEQ-LNLTGHKHGLAD-EETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~-~~~~G~i~~~el~~~l~~-~g~~~~~~~~~~-~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ......|+.+|+.||+ +++ |+|+.+||+.+|.. +|     ..+++ +++++||+.+|.|+||.|+|+||+.+|.
T Consensus         4 E~ai~~l~~~F~~fd~~~~~-g~i~~~ELk~ll~~elg-----~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~   74 (89)
T cd05022           4 EKAIETLVSNFHKASVKGGK-ESLTASEFQELLTQQLP-----HLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIG   74 (89)
T ss_pred             HHHHHHHHHHHHHHhCCCCC-CeECHHHHHHHHHHHhh-----hhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHH
Confidence            3456789999999999 999 99999999999999 88     77888 9999999999999999999999997663

S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu

>COG3021 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.29  E-value=1.4e-11  Score=114.39  Aligned_cols=197  Identities=15%  Similarity=0.081  Sum_probs=113.9

Q ss_pred             CCCceeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhhhcCC
Q 013259           26 QQPCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGY  105 (447)
Q Consensus        26 ~~~~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy  105 (447)
                      .+..++++++|+++..     .                -...++..+...++|+|.+||..   ........ .+. ..|
T Consensus        85 ~~~~~~~l~~N~r~~n-----~----------------~~~k~Lsl~~~~~~D~v~~~E~~---~~~~~~~~-~l~-~~y  138 (309)
T COG3021          85 DQRLLWNLQKNVRFDN-----A----------------SVAKLLSLIQQLDADAVTTPEGV---QLWTAKVG-ALA-AQY  138 (309)
T ss_pred             cchhhhhhhhhccccC-----c----------------CHHHHHHHHhhhCcchhhhHHHH---HHhHhHHH-HHH-HhC
Confidence            3567999999988631     1                14667777888889999999983   12222222 222 234


Q ss_pred             cEEEecCCCCCCceEEEEEecCCceEeeeEEEEecCCCCchhhhhhhcccccccccccCCCCCeEEEEEeccc-CCCCCC
Q 013259          106 VNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLL-FPHDSS  184 (447)
Q Consensus       106 ~~~~~~~~~~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~v~n~HL~-~~~~~~  184 (447)
                      .++.....+....+.+++  +++.++...+.-..... .+.+.          ........|..+.|++.|.. ++-.  
T Consensus       139 P~~~~~~~~~~~~~~a~~--sr~~~~~~~~~e~~~~~-pk~~~----------~t~~~~~~g~~l~v~~lh~~~~~~~--  203 (309)
T COG3021         139 PAFILCQHPTGVFTLAIL--SRRPCCPLTEAEPWLRL-PKSAL----------ATAYPLPDGTELTVVALHAVNFPVG--  203 (309)
T ss_pred             CceeecCCCCCeeeeeec--cccccccccccCccccC-Cccce----------eEEEEcCCCCEEEEEeeccccccCC--
Confidence            433322233356788888  66432321111111110 11111          11223446899999999996 4332  


Q ss_pred             CchhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCCchhHhhhhCCCcccccccccCCCCCCCceeecccCCCc
Q 013259          185 LSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRNHRGN  264 (447)
Q Consensus       185 ~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~g~~d~~~~~~~~~~~~~~tw~~~~~~~~~  264 (447)
                      ....| +|...+.+.+..       -..|+|++||||+.|+|..++.+...+..+++...+.   ....+|+..... -.
T Consensus       204 ~~~~~-~ql~~l~~~i~~-------~~gpvIlaGDfNa~pWS~~~~R~~~l~~~~~~~~aG~---~~~~~~p~~~~r-~~  271 (309)
T COG3021         204 TDPQR-AQLLELGDQIAG-------HSGPVILAGDFNAPPWSRTAKRMAALGGLRAAPRAGL---WEVRFTPDERRR-AF  271 (309)
T ss_pred             ccHHH-HHHHHHHHHHHc-------CCCCeEEeecCCCcchhHHHHHHHHhcccccchhccC---CccccCHHHHhh-cc
Confidence            22334 666666666655       3579999999999999999999877666665555541   122333333211 11


Q ss_pred             cccccceeccC
Q 013259          265 ICGVDFIWLLN  275 (447)
Q Consensus       265 ~~rIDyI~~~~  275 (447)
                      ...|||||+++
T Consensus       272 g~PIDhvf~rg  282 (309)
T COG3021         272 GLPIDHVFYRG  282 (309)
T ss_pred             CCCcceeeecC
Confidence            34699999976

>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]

Probab=99.29  E-value=1.3e-11  Score=104.60  Aligned_cols=80  Identities=29%  Similarity=0.483  Sum_probs=70.4

Q ss_pred             HHHHhHHHHHH--HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehH
Q 013259          289 EAVFGMFKCLL--RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYK  366 (447)
Q Consensus       289 ~~v~~~~~~~~--~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~  366 (447)
                      .+++.++....  ....++++.+|+.||+|++ |+|+..||+.+|+.+|     ..++++++++|++.+|.|+||.|+|+
T Consensus        75 ~~Fl~~ms~~~~~~~~~Eel~~aF~~fD~d~d-G~Is~~eL~~vl~~lg-----e~~~deev~~ll~~~d~d~dG~i~~~  148 (160)
T COG5126          75 PEFLTVMSVKLKRGDKEEELREAFKLFDKDHD-GYISIGELRRVLKSLG-----ERLSDEEVEKLLKEYDEDGDGEIDYE  148 (160)
T ss_pred             HHHHHHHHHHhccCCcHHHHHHHHHHhCCCCC-ceecHHHHHHHHHhhc-----ccCCHHHHHHHHHhcCCCCCceEeHH
Confidence            34555555555  3457899999999999999 9999999999999999     99999999999999999999999999


Q ss_pred             HHHHHHhc
Q 013259          367 EFQQRIWK  374 (447)
Q Consensus       367 EF~~~~~~  374 (447)
                      ||++.+..
T Consensus       149 eF~~~~~~  156 (160)
T COG5126         149 EFKKLIKD  156 (160)
T ss_pred             HHHHHHhc
Confidence            99977654

>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B

Probab=99.25  E-value=1.9e-11  Score=94.39  Aligned_cols=67  Identities=22%  Similarity=0.335  Sum_probs=61.0

Q ss_pred             HhhhhhHHHHhhhhc-CCCCCC-cccHHHHHHHHHH-----hccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          300 RRASLTETDAFAFLK-ADNDGD-YITYSGFCEALEQ-----LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D-~~~~~G-~i~~~el~~~l~~-----~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ......+.++|+.|| +|++ | +|+.+||+.+|+.     +|     ...++++++.+|+.+|.|+||+|+|+||+.++
T Consensus         4 e~~~~~l~~aF~~fD~~dgd-G~~I~~~eL~~ll~~~~~~~lg-----~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li   77 (88)
T cd05027           4 EKAMVALIDVFHQYSGREGD-KHKLKKSELKELINNELSHFLE-----EIKEQEVVDKVMETLDSDGDGECDFQEFMAFV   77 (88)
T ss_pred             HHHHHHHHHHHHHhcccCCC-cCEECHHHHHHHHHHHhHHHhc-----CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            345678999999998 7999 9 5999999999999     88     77899999999999999999999999999665

S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i

>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E

Probab=99.24  E-value=2e-11  Score=89.49  Aligned_cols=61  Identities=30%  Similarity=0.565  Sum_probs=53.3

Q ss_pred             HHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHH----HHHHHHHcCCCCCceeehHHHHHHH
Q 013259          306 ETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEE----TKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       306 l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~----~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      |+++|+.+|+|++ |+|+.+||+.+++.++     ...++++    ++.+++.+|.|+||.|+|+||+.+|
T Consensus         2 l~~~F~~~D~d~~-G~i~~~el~~~~~~~~-----~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~   66 (66)
T PF13499_consen    2 LKEAFKKFDKDGD-GYISKEELRRALKHLG-----RDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM   66 (66)
T ss_dssp             HHHHHHHHSTTSS-SEEEHHHHHHHHHHTT-----SHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred             HHHHHHHHcCCcc-CCCCHHHHHHHHHHhc-----ccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence            6889999999999 9999999999999998     5554544    5556999999999999999999764

...

>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=99.19  E-value=8.5e-11  Score=101.29  Aligned_cols=65  Identities=32%  Similarity=0.550  Sum_probs=61.7

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ..+++++|+.||+|++ |+||.+||+.+|..+|     .+++.++++.|++.+|.|+||.|+|+||+++|.
T Consensus        84 ~~el~eaF~~fD~d~~-G~Is~~el~~~l~~lg-----~~~~~~e~~~mi~~~d~d~dg~i~f~ef~~~m~  148 (151)
T KOG0027|consen   84 SEELKEAFRVFDKDGD-GFISASELKKVLTSLG-----EKLTDEECKEMIREVDVDGDGKVNFEEFVKMMS  148 (151)
T ss_pred             HHHHHHHHHHHccCCC-CcCcHHHHHHHHHHhC-----CcCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHh
Confidence            4599999999999999 9999999999999999     999999999999999999999999999997664

>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z

Probab=99.12  E-value=1.9e-10  Score=90.13  Aligned_cols=70  Identities=17%  Similarity=0.174  Sum_probs=57.6

Q ss_pred             HhhhhhHHHHhhhhc-CCCCCC-cccHHHHHHHHHH-hccCCC-CCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          300 RRASLTETDAFAFLK-ADNDGD-YITYSGFCEALEQ-LNLTGH-KHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D-~~~~~G-~i~~~el~~~l~~-~g~~~~-~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ......+.++|+.|| +|++ | +||.+||+.+|.. ++  +. ....++.+++++|+++|.|+||.|+|+||+.+|
T Consensus         6 e~a~~~~~~~F~~~dd~dgd-g~~Is~~EL~~ll~~~~~--~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~   79 (93)
T cd05026           6 EGAMDTLIRIFHNYSGKEGD-RYKLSKGELKELLQRELT--DFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLV   79 (93)
T ss_pred             HHHHHHHHHHHHHHHccCCC-CCEECHHHHHHHHHHHhH--HhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            455678889999999 7899 8 5999999999976 22  00 034578899999999999999999999999665

S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac

>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6

Probab=99.09  E-value=2.3e-10  Score=88.39  Aligned_cols=67  Identities=15%  Similarity=0.224  Sum_probs=59.6

Q ss_pred             HhhhhhHHHHhhhhcC-CC-CCCcccHHHHHHHHHH---hccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          300 RRASLTETDAFAFLKA-DN-DGDYITYSGFCEALEQ---LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~-~~-~~G~i~~~el~~~l~~---~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ......|-.+|+.+|. |+ + |+|+.+||+.+|..   +|     .++++++++++|+.+|.|++|+|+|+||+.+|
T Consensus         6 e~~~~~~i~~F~~y~~~~~~~-g~Is~~EL~~~l~~~~~lg-----~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm   77 (88)
T cd05029           6 DQAIGLLVAIFHKYSGREGDK-NTLSKKELKELIQKELTIG-----SKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFL   77 (88)
T ss_pred             HHHHHHHHHHHHHHHccCCCC-CEECHHHHHHHHHHHHhcC-----CCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHH
Confidence            3456678889999998 77 6 99999999999973   68     88999999999999999999999999999666

S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact

>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]

Probab=99.08  E-value=1.1e-10  Score=98.88  Aligned_cols=121  Identities=18%  Similarity=0.212  Sum_probs=94.2

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhccC---
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTT---  376 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~~---  376 (447)
                      ..+..+++++|..+|+|++ |.|+.+||..+|+.+|     .++++.++.+||..+|. ++|.|+|.||+..|-...   
T Consensus        16 ~~qi~~lkeaF~l~D~d~~-G~I~~~el~~ilr~lg-----~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~~   88 (160)
T COG5126          16 EEQIQELKEAFQLFDRDSD-GLIDRNELGKILRSLG-----FNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLKRG   88 (160)
T ss_pred             HHHHHHHHHHHHHhCcCCC-CCCcHHHHHHHHHHcC-----CCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhccC
Confidence            5677899999999999999 9999999999999999     89999999999999999 999999999997774322   


Q ss_pred             --------cccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCcceeE
Q 013259          377 --------WSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  434 (447)
Q Consensus       377 --------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  434 (447)
                              ++.-.|.+..|.|.-++...-...+|-+.+..-     |.+  -...++.+.||.++-
T Consensus        89 ~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~~dee-----v~~--ll~~~d~d~dG~i~~  147 (160)
T COG5126          89 DKEEELREAFKLFDKDHDGYISIGELRRVLKSLGERLSDEE-----VEK--LLKEYDEDGDGEIDY  147 (160)
T ss_pred             CcHHHHHHHHHHhCCCCCceecHHHHHHHHHhhcccCCHHH-----HHH--HHHhcCCCCCceEeH
Confidence                    234556777777777666555556665544433     222  234677788888763

>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1

Probab=99.06  E-value=4.4e-10  Score=88.09  Aligned_cols=71  Identities=18%  Similarity=0.253  Sum_probs=58.9

Q ss_pred             HhhhhhHHHHhhhhc-CCCCCC-cccHHHHHHHHHH-hccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          300 RRASLTETDAFAFLK-ADNDGD-YITYSGFCEALEQ-LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D-~~~~~G-~i~~~el~~~l~~-~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ......++++|+.|| .|++ | +|+.+||+.+|+. +|.. -...+++++++.+|+.+|.|++|.|+|+||+.++
T Consensus         5 e~~~~~l~~~F~~fDd~dg~-G~~Is~~El~~~l~~~lg~~-~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~   78 (92)
T cd05025           5 ETAMETLINVFHAHSGKEGD-KYKLSKKELKDLLQTELSDF-LDAQKDADAVDKIMKELDENGDGEVDFQEFVVLV   78 (92)
T ss_pred             HHHHHHHHHHHHHHhcccCC-CCeECHHHHHHHHHHHHHHH-ccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHH
Confidence            345578999999997 9999 9 4999999999985 5510 0034688999999999999999999999999655

S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.

>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10

Probab=99.04  E-value=5.6e-10  Score=87.86  Aligned_cols=68  Identities=15%  Similarity=0.201  Sum_probs=59.9

Q ss_pred             hhhhhHHHHhhhhcC-CC-CCCcccHHHHHHHHHH-----hccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          301 RASLTETDAFAFLKA-DN-DGDYITYSGFCEALEQ-----LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~-~~-~~G~i~~~el~~~l~~-----~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      .....++.+|..||. |+ + |+|+.+||+.+|+.     +|     ..+++++++.+++.+|.+++|.|+|+||+.++.
T Consensus         5 ~~~~~l~~~F~~~D~~dg~d-G~Is~~El~~~l~~~~g~~lg-----~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~   78 (94)
T cd05031           5 HAMESLILTFHRYAGKDGDK-NTLSRKELKKLMEKELSEFLK-----NQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVA   78 (94)
T ss_pred             HHHHHHHHHHHHHhccCCCC-CeECHHHHHHHHHHHhHHHhh-----ccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            345678999999997 97 8 99999999999986     45     678999999999999999999999999997764


Q ss_pred             c
Q 013259          374 K  374 (447)
Q Consensus       374 ~  374 (447)
                      .
T Consensus        79 ~   79 (94)
T cd05031          79 G   79 (94)
T ss_pred             H
Confidence            4

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.04  E-value=1.5e-10  Score=101.13  Aligned_cols=101  Identities=16%  Similarity=0.171  Sum_probs=91.5

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc-----cCc
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK-----TTW  377 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~-----~~~  377 (447)
                      ...+...|...|+|+. |+|+.+||+.+|.+.+    +.+++.+.++.||..||.+.+|+|+|.||. .||.     +.+
T Consensus        56 ~~~~~~~f~~vD~d~s-g~i~~~eLq~aLsn~~----~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~-~Lw~~i~~Wr~v  129 (221)
T KOG0037|consen   56 FPQLAGWFQSVDRDRS-GRILAKELQQALSNGT----WSPFSIETCRLMISMFDRDNSGTIGFKEFK-ALWKYINQWRNV  129 (221)
T ss_pred             cHHHHHHHHhhCcccc-ccccHHHHHHHhhcCC----CCCCCHHHHHHHHHHhcCCCCCccCHHHHH-HHHHHHHHHHHH
Confidence            3467789999999999 9999999999998754    377999999999999999999999999999 7776     566


Q ss_pred             ccccccCCCcccccccccccccccceEEeccc
Q 013259          378 SDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAV  409 (447)
Q Consensus       378 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  409 (447)
                      +.+.|.+.+|.|+..|...++..+||.+++..
T Consensus       130 F~~~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~  161 (221)
T KOG0037|consen  130 FRTYDRDRSGTIDSSELRQALTQLGYRLSPQF  161 (221)
T ss_pred             HHhcccCCCCcccHHHHHHHHHHcCcCCCHHH
Confidence            78999999999999999999999999988776

>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=99.03  E-value=5.9e-10  Score=96.00  Aligned_cols=119  Identities=19%  Similarity=0.284  Sum_probs=87.8

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhccCcc--
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTTWS--  378 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~~~~--  378 (447)
                      ....+++++|..||+|++ |+|+..||..+|+.+|     ..+++.++..++.++|.+++|.|+|+||+.+|......  
T Consensus         5 ~~~~el~~~F~~fD~d~~-G~i~~~el~~~lr~lg-----~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~   78 (151)
T KOG0027|consen    5 EQILELKEAFQLFDKDGD-GKISVEELGAVLRSLG-----QNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKT   78 (151)
T ss_pred             HHHHHHHHHHHHHCCCCC-CcccHHHHHHHHHHcC-----CCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccc
Confidence            345689999999999999 9999999999999999     88999999999999999999999999999766432221  


Q ss_pred             -------------cccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCcce
Q 013259          379 -------------DQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARL  432 (447)
Q Consensus       379 -------------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  432 (447)
                                   .-.|.+..|.|...|...-...+|.+.+     ..++..  .....|.+.||.+
T Consensus        79 ~~~~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~~-----~~e~~~--mi~~~d~d~dg~i  138 (151)
T KOG0027|consen   79 DEEASSEELKEAFRVFDKDGDGFISASELKKVLTSLGEKLT-----DEECKE--MIREVDVDGDGKV  138 (151)
T ss_pred             cccccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCcCC-----HHHHHH--HHHhcCCCCCCeE
Confidence                         2335555566666665555555664444     112222  2335556667765

>smart00027 EH Eps15 homology domain

Probab=99.03  E-value=7.5e-10  Score=87.52  Aligned_cols=65  Identities=23%  Similarity=0.301  Sum_probs=59.5

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      .....++++|+.+|+|++ |+|+.+||+.+|+.+|       ++++++++++..+|.+++|.|+|+||+.++.
T Consensus         7 ~~~~~l~~~F~~~D~d~~-G~Is~~el~~~l~~~~-------~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~   71 (96)
T smart00027        7 EDKAKYEQIFRSLDKNQD-GTVTGAQAKPILLKSG-------LPQTLLAKIWNLADIDNDGELDKDEFALAMH   71 (96)
T ss_pred             HHHHHHHHHHHHhCCCCC-CeEeHHHHHHHHHHcC-------CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            355688999999999999 9999999999999987       7889999999999999999999999996663

Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.

>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction

Probab=99.01  E-value=7.7e-10  Score=81.14  Aligned_cols=59  Identities=25%  Similarity=0.350  Sum_probs=54.6

Q ss_pred             HHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          307 TDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       307 ~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      +++|+.+|+|++ |.|+.+||+.+|..+|       +++++++.++..+|.+++|.|+|+||+..+.
T Consensus         2 ~~~F~~~D~~~~-G~i~~~el~~~l~~~g-------~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~   60 (67)
T cd00052           2 DQIFRSLDPDGD-GLISGDEARPFLGKSG-------LPRSVLAQIWDLADTDKDGKLDKEEFAIAMH   60 (67)
T ss_pred             hHHHHHhCCCCC-CcCcHHHHHHHHHHcC-------CCHHHHHHHHHHhcCCCCCcCCHHHHHHHHH
Confidence            578999999999 9999999999999988       5889999999999999999999999996653

The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.

>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]

Probab=98.98  E-value=2.4e-09  Score=88.80  Aligned_cols=78  Identities=24%  Similarity=0.339  Sum_probs=69.0

Q ss_pred             HHHhHHHHHH--HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHH
Q 013259          290 AVFGMFKCLL--RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE  367 (447)
Q Consensus       290 ~v~~~~~~~~--~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~E  367 (447)
                      .+..++...+  +....++..+|+.+|.|++ |+||..+|+.+.+.||     .+++++++..||.++|.|+||-|+-+|
T Consensus        90 ~f~~~mt~k~~e~dt~eEi~~afrl~D~D~~-Gkis~~~lkrvakeLg-----enltD~El~eMIeEAd~d~dgevneeE  163 (172)
T KOG0028|consen   90 DFRRVMTVKLGERDTKEEIKKAFRLFDDDKT-GKISQRNLKRVAKELG-----ENLTDEELMEMIEEADRDGDGEVNEEE  163 (172)
T ss_pred             HHHHHHHHHHhccCcHHHHHHHHHcccccCC-CCcCHHHHHHHHHHhC-----ccccHHHHHHHHHHhcccccccccHHH
Confidence            3444444444  5688899999999999999 9999999999999999     999999999999999999999999999


Q ss_pred             HHHHHh
Q 013259          368 FQQRIW  373 (447)
Q Consensus       368 F~~~~~  373 (447)
                      |...|.
T Consensus       164 F~~imk  169 (172)
T KOG0028|consen  164 FIRIMK  169 (172)
T ss_pred             HHHHHh
Confidence            996553

>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11

Probab=98.96  E-value=2.1e-09  Score=83.15  Aligned_cols=74  Identities=16%  Similarity=0.179  Sum_probs=58.2

Q ss_pred             HhhhhhHHHHhhh-hcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          300 RRASLTETDAFAF-LKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       300 ~~~~~~l~~~F~~-~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ......|..+|+. +|+++++|+|+.+||+.+|....-.-.....++.+++++|+.+|.|+||.|+|+||+.+|.
T Consensus         5 e~~i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~   79 (89)
T cd05023           5 ERCIESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIG   79 (89)
T ss_pred             HHHHHHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHH
Confidence            3456688899999 8888982399999999999875200000346778999999999999999999999997663

S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S

>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif

Probab=98.92  E-value=2.6e-09  Score=82.98  Aligned_cols=71  Identities=25%  Similarity=0.288  Sum_probs=58.6

Q ss_pred             hhhhhHHHHhhhhcC--CCCCCcccHHHHHHHHHH-hccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          301 RASLTETDAFAFLKA--DNDGDYITYSGFCEALEQ-LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~--~~~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      .....++++|..||+  |++ |+|+.+||+.+++. +|.. .+...+.++++.++..+|.+++|.|+|+||+.++.
T Consensus         5 ~~~~~l~~~F~~~D~~~~~~-G~Is~~el~~~l~~~~g~~-~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~   78 (88)
T cd00213           5 KAIETIIDVFHKYSGKEGDK-DTLSKKELKELLETELPNF-LKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIG   78 (88)
T ss_pred             HHHHHHHHHHHHHhhccCCC-CcCcHHHHHHHHHHHhhhh-ccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHH
Confidence            456678999999999  899 99999999999986 5500 00224589999999999999999999999997663

Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th

>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]

Probab=98.91  E-value=1.9e-09  Score=92.38  Aligned_cols=82  Identities=20%  Similarity=0.315  Sum_probs=70.7

Q ss_pred             HHHhHHHHHHHhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHH
Q 013259          290 AVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ  369 (447)
Q Consensus       290 ~v~~~~~~~~~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~  369 (447)
                      .++.-+...-+.+++.+..+|+.+|.+.| |+|+..||+.+|.++|     .+-|.--++.||+++|.|.||+|+|-||+
T Consensus        85 n~yteF~eFsrkqIk~~~~~Fk~yDe~rD-gfIdl~ELK~mmEKLg-----apQTHL~lK~mikeVded~dgklSfrefl  158 (244)
T KOG0041|consen   85 NVYTEFSEFSRKQIKDAESMFKQYDEDRD-GFIDLMELKRMMEKLG-----APQTHLGLKNMIKEVDEDFDGKLSFREFL  158 (244)
T ss_pred             chhhhhhHHHHHHHHHHHHHHHHhccccc-ccccHHHHHHHHHHhC-----CchhhHHHHHHHHHhhcccccchhHHHHH
Confidence            34444443447788899999999999999 9999999999999999     88888889999999999999999999999


Q ss_pred             HHHhccCcc
Q 013259          370 QRIWKTTWS  378 (447)
Q Consensus       370 ~~~~~~~~~  378 (447)
                       +++++...
T Consensus       159 -LIfrkaaa  166 (244)
T KOG0041|consen  159 -LIFRKAAA  166 (244)
T ss_pred             -HHHHHHhc
Confidence             77665543

>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A

Probab=98.91  E-value=3.8e-09  Score=73.86  Aligned_cols=49  Identities=33%  Similarity=0.518  Sum_probs=46.3

Q ss_pred             CcccHHHHHHHHHHhccCCCCCC-CCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          320 DYITYSGFCEALEQLNLTGHKHG-LADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       320 G~i~~~el~~~l~~~g~~~~~~~-~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      |.|+.+||+.+|..+|     .. +++++++.++..+|.|++|.|+|+||+.++.
T Consensus         3 G~i~~~~~~~~l~~~g-----~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~   52 (54)
T PF13833_consen    3 GKITREEFRRALSKLG-----IKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQ   52 (54)
T ss_dssp             SEEEHHHHHHHHHHTT-----SSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHH
T ss_pred             CEECHHHHHHHHHHhC-----CCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Confidence            9999999999998889     88 9999999999999999999999999997663

...

>PTZ00183 centrin; Provisional

Probab=98.81  E-value=4.4e-09  Score=91.18  Aligned_cols=120  Identities=17%  Similarity=0.216  Sum_probs=85.7

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhcc-----
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT-----  375 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~-----  375 (447)
                      .....+.++|..+|.+++ |+|+..||..+|+.+|     ..++.+++..++..+|.+++|.|+|+||+..+...     
T Consensus        14 ~~~~~~~~~F~~~D~~~~-G~i~~~e~~~~l~~~g-----~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~   87 (158)
T PTZ00183         14 DQKKEIREAFDLFDTDGS-GTIDPKELKVAMRSLG-----FEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERD   87 (158)
T ss_pred             HHHHHHHHHHHHhCCCCC-CcccHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCC
Confidence            344678899999999999 9999999999999998     77889999999999999999999999999765321     


Q ss_pred             ------CcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          376 ------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       376 ------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                            ..+...+.+..|.++..+........|..++     ..++..  +...++.+++|.|+
T Consensus        88 ~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~l~-----~~~~~~--~~~~~d~~~~g~i~  144 (158)
T PTZ00183         88 PREEILKAFRLFDDDKTGKISLKNLKRVAKELGETIT-----DEELQE--MIDEADRNGDGEIS  144 (158)
T ss_pred             cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCC-----HHHHHH--HHHHhCCCCCCcCc
Confidence                  1123444555555555444433333342222     222333  45677888888765

>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

Probab=98.76  E-value=4e-08  Score=70.12  Aligned_cols=61  Identities=31%  Similarity=0.583  Sum_probs=56.8

Q ss_pred             HHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          306 ETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       306 l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      +..+|..+|.+++ |.|+.+|+..++..++     ...+.+.+..++..+|.+++|.|+|+||+..+
T Consensus         2 ~~~~f~~~d~~~~-g~l~~~e~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~   62 (63)
T cd00051           2 LREAFRLFDKDGD-GTISADELKAALKSLG-----EGLSEEEIDEMIREVDKDGDGKIDFEEFLELM   62 (63)
T ss_pred             HHHHHHHhCCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence            5678999999999 9999999999999999     88999999999999999999999999998543

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.

>PTZ00184 calmodulin; Provisional

Probab=98.75  E-value=6.8e-09  Score=88.91  Aligned_cols=121  Identities=16%  Similarity=0.230  Sum_probs=85.0

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhcc-----
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT-----  375 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~-----  375 (447)
                      ...+.++..|..+|.+++ |.|+.+||..++..+|     ..++.+++..++..+|.+++|.|+|+||+..+...     
T Consensus         8 ~~~~~~~~~F~~~D~~~~-G~i~~~e~~~~l~~~~-----~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~   81 (149)
T PTZ00184          8 EQIAEFKEAFSLFDKDGD-GTITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDTD   81 (149)
T ss_pred             HHHHHHHHHHHHHcCCCC-CcCCHHHHHHHHHHhC-----CCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCc
Confidence            345678899999999999 9999999999999988     77888999999999999999999999999766421     


Q ss_pred             ------CcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCcceeE
Q 013259          376 ------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  434 (447)
Q Consensus       376 ------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  434 (447)
                            ..+...|.+..|.+..++........|+.++...     +..  ....++.+++|.++.
T Consensus        82 ~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~-----~~~--~~~~~d~~~~g~i~~  139 (149)
T PTZ00184         82 SEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEE-----VDE--MIREADVDGDGQINY  139 (149)
T ss_pred             HHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCCCCCHHH-----HHH--HHHhcCCCCCCcCcH
Confidence                  1223334445555555554433333343322221     111  335677788888653

>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12

Probab=98.72  E-value=3.4e-08  Score=76.48  Aligned_cols=68  Identities=18%  Similarity=0.278  Sum_probs=57.9

Q ss_pred             HhhhhhHHHHhhhhcCC--CCCCcccHHHHHHHHH-HhccCCCCCCCC----HHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          300 RRASLTETDAFAFLKAD--NDGDYITYSGFCEALE-QLNLTGHKHGLA----DEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~--~~~G~i~~~el~~~l~-~~g~~~~~~~~~----~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ......+...|+.++..  .+ |+|+.+||+.+|. .+|     ..++    +++++.+|+.+|.|++|.|+|+||+.+|
T Consensus         4 e~~i~~~~~~f~~y~~~~~~~-~~Is~~El~~ll~~~~g-----~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~   77 (88)
T cd05030           4 EKAIETIINVFHQYSVRKGHP-DTLYKKEFKQLVEKELP-----NFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLV   77 (88)
T ss_pred             HHHHHHHHHHHHHHhccCCCc-ccCCHHHHHHHHHHHhh-----HhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHH
Confidence            34566788899999975  36 9999999999997 566     5566    8999999999999999999999999766


Q ss_pred             h
Q 013259          373 W  373 (447)
Q Consensus       373 ~  373 (447)
                      .
T Consensus        78 ~   78 (88)
T cd05030          78 I   78 (88)
T ss_pred             H
Confidence            4

Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.

>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]

Probab=98.71  E-value=3.8e-08  Score=81.76  Aligned_cols=68  Identities=19%  Similarity=0.315  Sum_probs=62.5

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      .+...++.+|..||.+++ |+|+.+||+.+++.+|     ..+..+++.+|+..+|+++.|.|+|++|+..|-.
T Consensus        30 ~q~q~i~e~f~lfd~~~~-g~iD~~EL~vAmralG-----FE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~   97 (172)
T KOG0028|consen   30 EQKQEIKEAFELFDPDMA-GKIDVEELKVAMRALG-----FEPKKEEILKLLADVDKEGSGKITFEDFRRVMTV   97 (172)
T ss_pred             HHHhhHHHHHHhhccCCC-CcccHHHHHHHHHHcC-----CCcchHHHHHHHHhhhhccCceechHHHHHHHHH
Confidence            455788999999999999 9999999999999999     6789999999999999999999999999977643

>PF14658 EF-hand_9: EF-hand domain

Probab=98.71  E-value=5.5e-08  Score=69.19  Aligned_cols=60  Identities=20%  Similarity=0.335  Sum_probs=55.9

Q ss_pred             HHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCC-CCCHHHHHHHHHHcCCCCC-ceeehHHHHHHHh
Q 013259          308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKH-GLADEETKDLWVQADIDGN-GVVDYKEFQQRIW  373 (447)
Q Consensus       308 ~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~-~~~~~~~~~~~~~~D~~~~-g~i~~~EF~~~~~  373 (447)
                      .+|..||.++. |.|...+|...|+.++     . .+++.+++.+.+++|.++. |.|+|+.|+..|.
T Consensus         2 ~~F~~fD~~~t-G~V~v~~l~~~Lra~~-----~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~   63 (66)
T PF14658_consen    2 TAFDAFDTQKT-GRVPVSDLITYLRAVT-----GRSPEESELQDLINELDPEGRDGSVNFDTFLAIMR   63 (66)
T ss_pred             cchhhcCCcCC-ceEeHHHHHHHHHHHc-----CCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHH
Confidence            37999999999 9999999999999998     6 8999999999999999998 9999999997663

>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP)

Probab=98.69  E-value=4.3e-08  Score=79.47  Aligned_cols=62  Identities=15%  Similarity=0.183  Sum_probs=54.9

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .....+.-+|..+|.|+| |+|+.+||..++  ++       ..+..+..+|..+|.|+||.|+++||...+
T Consensus        45 ~~~~~l~w~F~~lD~d~D-G~Ls~~EL~~~~--l~-------~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl  106 (116)
T cd00252          45 MCKDPVGWMFNQLDGNYD-GKLSHHELAPIR--LD-------PNEHCIKPFFESCDLDKDGSISLDEWCYCF  106 (116)
T ss_pred             HHHHHHHHHHHHHCCCCC-CcCCHHHHHHHH--cc-------chHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence            355678889999999999 999999999876  45       567889999999999999999999999766

SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.

>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]

Probab=98.67  E-value=1.1e-07  Score=78.38  Aligned_cols=94  Identities=23%  Similarity=0.287  Sum_probs=78.9

Q ss_pred             cccceeccCcchhhhhhhhhhhHHHHhHHHHHH--HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCC
Q 013259          267 GVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLL--RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLA  344 (447)
Q Consensus       267 rIDyI~~~~~~~~~~~~~~sw~~~v~~~~~~~~--~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~  344 (447)
                      -||.++-..+.+.       .-..++.++...+  ......|..+|+.||.+++ |.|..+.|+++|..+|     .+++
T Consensus        69 elDaM~~Ea~gPI-------Nft~FLTmfGekL~gtdpe~~I~~AF~~FD~~~~-G~I~~d~lre~Ltt~g-----Dr~~  135 (171)
T KOG0031|consen   69 ELDAMMKEAPGPI-------NFTVFLTMFGEKLNGTDPEEVILNAFKTFDDEGS-GKIDEDYLRELLTTMG-----DRFT  135 (171)
T ss_pred             HHHHHHHhCCCCe-------eHHHHHHHHHHHhcCCCHHHHHHHHHHhcCccCC-CccCHHHHHHHHHHhc-----ccCC
Confidence            3777764322211       2346688888888  5677899999999999999 9999999999999999     9999


Q ss_pred             HHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          345 DEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       345 ~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ++||+.|++.+=.|..|.|+|.+|+..|-
T Consensus       136 ~eEV~~m~r~~p~d~~G~~dy~~~~~~it  164 (171)
T KOG0031|consen  136 DEEVDEMYREAPIDKKGNFDYKAFTYIIT  164 (171)
T ss_pred             HHHHHHHHHhCCcccCCceeHHHHHHHHH
Confidence            99999999999999999999999996663

>PTZ00184 calmodulin; Provisional

Probab=98.65  E-value=1.1e-07  Score=81.23  Aligned_cols=65  Identities=26%  Similarity=0.543  Sum_probs=60.0

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ...+..+|+.+|.+++ |+|+.+||+.++..+|     ..++.++++.++..+|.+++|.|+|+||+..+.
T Consensus        83 ~~~~~~~F~~~D~~~~-g~i~~~e~~~~l~~~~-----~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  147 (149)
T PTZ00184         83 EEEIKEAFKVFDRDGN-GFISAAELRHVMTNLG-----EKLTDEEVDEMIREADVDGDGQINYEEFVKMMM  147 (149)
T ss_pred             HHHHHHHHHhhCCCCC-CeEeHHHHHHHHHHHC-----CCCCHHHHHHHHHhcCCCCCCcCcHHHHHHHHh
Confidence            3567889999999999 9999999999999998     779999999999999999999999999997664

>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.63  E-value=6.8e-08  Score=84.69  Aligned_cols=66  Identities=24%  Similarity=0.189  Sum_probs=61.3

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      .....+++|+.+|+|++ |.|+..||+.+|..+|     ..++++-++.+++.+|..++|.|.|++|++.+.
T Consensus       122 ~i~~Wr~vF~~~D~D~S-G~I~~sEL~~Al~~~G-----y~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv  187 (221)
T KOG0037|consen  122 YINQWRNVFRTYDRDRS-GTIDSSELRQALTQLG-----YRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCV  187 (221)
T ss_pred             HHHHHHHHHHhcccCCC-CcccHHHHHHHHHHcC-----cCCCHHHHHHHHHHhccccCCceeHHHHHHHHH
Confidence            44577899999999999 9999999999999999     889999999999999988899999999998763

>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]

Probab=98.63  E-value=1.2e-07  Score=76.82  Aligned_cols=79  Identities=19%  Similarity=0.358  Sum_probs=65.0

Q ss_pred             HHHHhHHHHHHHh----hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceee
Q 013259          289 EAVFGMFKCLLRR----ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVD  364 (447)
Q Consensus       289 ~~v~~~~~~~~~~----~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~  364 (447)
                      +.++.|.++....    .-++..+-++.||++++ |+|...||+.+|..+|     ..++++|+++++.-. .|++|.|+
T Consensus        69 E~fLpm~q~vaknk~q~t~edfvegLrvFDkeg~-G~i~~aeLRhvLttlG-----ekl~eeEVe~Llag~-eD~nG~i~  141 (152)
T KOG0030|consen   69 EEFLPMYQQVAKNKDQGTYEDFVEGLRVFDKEGN-GTIMGAELRHVLTTLG-----EKLTEEEVEELLAGQ-EDSNGCIN  141 (152)
T ss_pred             HHHHHHHHHHHhccccCcHHHHHHHHHhhcccCC-cceeHHHHHHHHHHHH-----hhccHHHHHHHHccc-cccCCcCc
Confidence            4555665555422    33466777899999999 9999999999999999     999999999999765 67889999


Q ss_pred             hHHHHHHHhc
Q 013259          365 YKEFQQRIWK  374 (447)
Q Consensus       365 ~~EF~~~~~~  374 (447)
                      |+.|++.++.
T Consensus       142 YE~fVk~i~~  151 (152)
T KOG0030|consen  142 YEAFVKHIMS  151 (152)
T ss_pred             HHHHHHHHhc
Confidence            9999987753

>PTZ00183 centrin; Provisional

Probab=98.63  E-value=1.7e-07  Score=81.12  Aligned_cols=66  Identities=23%  Similarity=0.363  Sum_probs=60.9

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ...++.+|+.+|.+++ |+|+..||..++..+|     ..+++++++.++..+|.+++|.|+|+||+..+..
T Consensus        89 ~~~l~~~F~~~D~~~~-G~i~~~e~~~~l~~~~-----~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  154 (158)
T PTZ00183         89 REEILKAFRLFDDDKT-GKISLKNLKRVAKELG-----ETITDEELQEMIDEADRNGDGEISEEEFYRIMKK  154 (158)
T ss_pred             HHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence            3568899999999999 9999999999999999     8899999999999999999999999999976644

>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]

Probab=98.59  E-value=3.2e-08  Score=94.18  Aligned_cols=126  Identities=18%  Similarity=0.198  Sum_probs=99.2

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhcc-----
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT-----  375 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~-----  375 (447)
                      .....++.+|+.||.+++ |.++..+|.+++..++.    .+...+-.+.++..+|.|.||.+||+||.+++..+     
T Consensus        11 er~~r~~~lf~~lD~~~~-g~~d~~~l~k~~~~l~~----~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~~E~~l~   85 (463)
T KOG0036|consen   11 ERDIRIRCLFKELDSKND-GQVDLDQLEKGLEKLDH----PKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDNKELELY   85 (463)
T ss_pred             HHHHHHHHHHHHhccCCC-CceeHHHHHHHHHhcCC----CCCchHHHHHHHHhcccCcCCcccHHHHHHHHHHhHHHHH
Confidence            345678899999999999 99999999999999971    24777889999999999999999999999998653     


Q ss_pred             CcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCcceeEEeeecc
Q 013259          376 TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTVVFSPIR  440 (447)
Q Consensus       376 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  440 (447)
                      .++...|.+..|.++-.|......++|.+++...+.. -++        .+++||.-++.+.+-|
T Consensus        86 ~~F~~iD~~hdG~i~~~Ei~~~l~~~gi~l~de~~~k-~~e--------~~d~~g~~~I~~~e~r  141 (463)
T KOG0036|consen   86 RIFQSIDLEHDGKIDPNEIWRYLKDLGIQLSDEKAAK-FFE--------HMDKDGKATIDLEEWR  141 (463)
T ss_pred             HHHhhhccccCCccCHHHHHHHHHHhCCccCHHHHHH-HHH--------HhccCCCeeeccHHHH
Confidence            3457788889999999999888999998876665321 111        2455666666665543

>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]

Probab=98.59  E-value=1.5e-07  Score=77.67  Aligned_cols=100  Identities=21%  Similarity=0.293  Sum_probs=75.3

Q ss_pred             HHHhHHHHHHHhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHH
Q 013259          290 AVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ  369 (447)
Q Consensus       290 ~v~~~~~~~~~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~  369 (447)
                      .++.|+.   +.++.+++++|..+|+|+| |.|..++|+.++..+|     ...++++++.||++.    .|-|+|.-|+
T Consensus        21 nvFamf~---q~QIqEfKEAF~~mDqnrD-G~IdkeDL~d~~aSlG-----k~~~d~elDaM~~Ea----~gPINft~FL   87 (171)
T KOG0031|consen   21 NVFAMFD---QSQIQEFKEAFNLMDQNRD-GFIDKEDLRDMLASLG-----KIASDEELDAMMKEA----PGPINFTVFL   87 (171)
T ss_pred             hHHHHhh---HHHHHHHHHHHHHHhccCC-CcccHHHHHHHHHHcC-----CCCCHHHHHHHHHhC----CCCeeHHHHH
Confidence            4455443   5678899999999999999 9999999999999999     889999999999886    6899999999


Q ss_pred             HHHhccCcc-----------cccccCCCcccccccccccccccc
Q 013259          370 QRIWKTTWS-----------DQRNDLNDEDEDGFVKSSLEQTIG  402 (447)
Q Consensus       370 ~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~g  402 (447)
                      .++-.+...           ...|....|.|++.....-+.+.|
T Consensus        88 TmfGekL~gtdpe~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~g  131 (171)
T KOG0031|consen   88 TMFGEKLNGTDPEEVILNAFKTFDDEGSGKIDEDYLRELLTTMG  131 (171)
T ss_pred             HHHHHHhcCCCHHHHHHHHHHhcCccCCCccCHHHHHHHHHHhc
Confidence            766443332           334555555555544443344444

>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]

Probab=98.58  E-value=5.9e-08  Score=78.62  Aligned_cols=96  Identities=16%  Similarity=0.139  Sum_probs=77.8

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCC--CCceeehHHHHHHHhccCcc
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADID--GNGVVDYKEFQQRIWKTTWS  378 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~--~~g~i~~~EF~~~~~~~~~~  378 (447)
                      +...+++++|..||..+| |+|+..++..+|+.+|     .++++.++.+.+.+++.+  +--+|+|++|+- |+.... 
T Consensus         8 d~~~e~ke~F~lfD~~gD-~ki~~~q~gdvlRalG-----~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLp-m~q~va-   79 (152)
T KOG0030|consen    8 DQMEEFKEAFLLFDRTGD-GKISGSQVGDVLRALG-----QNPTNAEVLKVLGQPKRREMNVKRLDFEEFLP-MYQQVA-   79 (152)
T ss_pred             chHHHHHHHHHHHhccCc-ccccHHHHHHHHHHhc-----CCCcHHHHHHHHcCcccchhhhhhhhHHHHHH-HHHHHH-
Confidence            344789999999999999 9999999999999999     999999999999999888  446899999994 433222 


Q ss_pred             cccccCCCcccccccccccccccceE
Q 013259          379 DQRNDLNDEDEDGFVKSSLEQTIGFS  404 (447)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~~~~~~g~~  404 (447)
                      ...++...+++-+..++.|....|+.
T Consensus        80 knk~q~t~edfvegLrvFDkeg~G~i  105 (152)
T KOG0030|consen   80 KNKDQGTYEDFVEGLRVFDKEGNGTI  105 (152)
T ss_pred             hccccCcHHHHHHHHHhhcccCCcce
Confidence            34555666777777777777777754

>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]

Probab=98.57  E-value=2.1e-07  Score=81.85  Aligned_cols=67  Identities=25%  Similarity=0.382  Sum_probs=55.8

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCC--HH----HHHHHHHHcCCCCCceeehHHHHHHHhcc
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLA--DE----ETKDLWVQADIDGNGVVDYKEFQQRIWKT  375 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~--~~----~~~~~~~~~D~~~~g~i~~~EF~~~~~~~  375 (447)
                      ..++=+|+.+|.+++ |+|+.+||+.++..+-  +  ...+  ++    -++.+|.++|.|+||+|+|+||.+.++..
T Consensus       104 ~Kl~faF~vYD~~~~-G~I~reel~~iv~~~~--~--~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~~  176 (187)
T KOG0034|consen  104 EKLRFAFRVYDLDGD-GFISREELKQILRMMV--G--ENDDMSDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVEKQ  176 (187)
T ss_pred             HHHHHHHHHhcCCCC-CcCcHHHHHHHHHHHH--c--cCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHcC
Confidence            477779999999999 9999999999999873  0  3333  33    36778999999999999999999888765

>smart00128 IPPc Inositol polyphosphate phosphatase, catalytic domain homologues

Probab=98.49  E-value=6.7e-07  Score=86.16  Aligned_cols=61  Identities=20%  Similarity=0.079  Sum_probs=38.4

Q ss_pred             cCCCCCeEEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHH-Hc-CCCCCcEEEeecCCCccC
Q 013259          163 NGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQK-EH-NLKPIPIILCGDWNGSKR  225 (447)
Q Consensus       163 ~~~~g~~l~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~-~~-~~~~~pvIl~GDFN~~p~  225 (447)
                      ....+..++++|+||.+..  .....|..+...++..+.--.. .. ......+|++||||---+
T Consensus       133 ~~~~~~~~~fv~~HL~a~~--~~~~~R~~~~~~I~~~~~f~~~~~~~~~~~d~~f~~GDlNyRi~  195 (310)
T smart00128      133 FKLSDTSFCFVNSHLAAGA--SNVEQRNQDYKTILRALSFPERAELSQFDHDVVFWFGDLNFRLD  195 (310)
T ss_pred             EEEcCcEEEEEeecccccc--chhhhhHHHHHHHHHhcCCCCCccccccccceEEEecCcceeec
Confidence            3345678999999997743  2345688888877654421000 00 013567999999997543

Mg(2+)-dependent/Li(+)-sensitive enzymes.

>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10

Probab=98.42  E-value=1e-06  Score=67.42  Aligned_cols=69  Identities=13%  Similarity=0.195  Sum_probs=53.7

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHH-hc-cCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQ-LN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~-~g-~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ......|..+|+.+- .+. +.++..||+.+|+. ++ +-  ...-.++.++++|+.+|.|+||.|+|.||+.++
T Consensus         4 E~ai~~lI~~FhkYa-G~~-~tLsk~Elk~Ll~~Elp~~l--~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv   74 (91)
T cd05024           4 EHSMEKMMLTFHKFA-GEK-NYLNRDDLQKLMEKEFSEFL--KNQNDPMAVDKIMKDLDDCRDGKVGFQSFFSLI   74 (91)
T ss_pred             HHHHHHHHHHHHHHc-CCC-CcCCHHHHHHHHHHHhHHHH--cCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            345567788999987 334 79999999999965 22 00  033467889999999999999999999999655

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]

Probab=98.26  E-value=3e-06  Score=80.96  Aligned_cols=74  Identities=23%  Similarity=0.376  Sum_probs=67.1

Q ss_pred             HHHHHHHhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          294 MFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       294 ~~~~~~~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      .+...+......+.++|+.+|.++| |.|+.+|+.+.|+.+|     .++++++++++++.+|+++++.|+++||...++
T Consensus        72 eF~~Y~~~~E~~l~~~F~~iD~~hd-G~i~~~Ei~~~l~~~g-----i~l~de~~~k~~e~~d~~g~~~I~~~e~rd~~l  145 (463)
T KOG0036|consen   72 EFKRYLDNKELELYRIFQSIDLEHD-GKIDPNEIWRYLKDLG-----IQLSDEKAAKFFEHMDKDGKATIDLEEWRDHLL  145 (463)
T ss_pred             HHHHHHHHhHHHHHHHHhhhccccC-CccCHHHHHHHHHHhC-----CccCHHHHHHHHHHhccCCCeeeccHHHHhhhh
Confidence            3444566778899999999999999 9999999999999999     889999999999999999999999999987663

>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]

Probab=98.25  E-value=3.9e-06  Score=80.54  Aligned_cols=69  Identities=23%  Similarity=0.380  Sum_probs=61.2

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ....|..+|+.+|+|++ |.||.+||+.+.+.++ ++....++++++.++-+.+|.|+||.||++||+++.
T Consensus       545 ~ks~LetiF~~iD~D~S-G~isldEF~~a~~l~~-sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAF  613 (631)
T KOG0377|consen  545 NKSSLETIFNIIDADNS-GEISLDEFRTAWKLLS-SHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAF  613 (631)
T ss_pred             chhhHHHHHHHhccCCC-CceeHHHHHHHHHHHH-hhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHH
Confidence            45678899999999999 9999999999998875 233467999999999999999999999999999766

>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand

Probab=98.23  E-value=1.7e-06  Score=51.60  Aligned_cols=26  Identities=35%  Similarity=0.740  Sum_probs=24.0

Q ss_pred             HHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          347 ETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       347 ~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      |++++|+.+|+|+||.|+++||+..|
T Consensus         1 E~~~~F~~~D~d~dG~I~~~Ef~~~~   26 (29)
T PF00036_consen    1 ELKEAFREFDKDGDGKIDFEEFKEMM   26 (29)
T ss_dssp             HHHHHHHHHSTTSSSEEEHHHHHHHH
T ss_pred             CHHHHHHHHCCCCCCcCCHHHHHHHH
Confidence            58899999999999999999999765

This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....

>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand

Probab=98.23  E-value=1.3e-06  Score=52.03  Aligned_cols=29  Identities=28%  Similarity=0.458  Sum_probs=26.7

Q ss_pred             hHHHHhhhhcCCCCCCcccHHHHHHHHHHh
Q 013259          305 TETDAFAFLKADNDGDYITYSGFCEALEQL  334 (447)
Q Consensus       305 ~l~~~F~~~D~~~~~G~i~~~el~~~l~~~  334 (447)
                      +++++|+.+|+|+| |+|+.+||+.+|+.|
T Consensus         1 E~~~~F~~~D~d~d-G~I~~~Ef~~~~~~L   29 (29)
T PF00036_consen    1 ELKEAFREFDKDGD-GKIDFEEFKEMMKKL   29 (29)
T ss_dssp             HHHHHHHHHSTTSS-SEEEHHHHHHHHHHT
T ss_pred             CHHHHHHHHCCCCC-CcCCHHHHHHHHHhC
Confidence            47889999999999 999999999999864

This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....

>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]

Probab=98.07  E-value=1.7e-05  Score=64.92  Aligned_cols=81  Identities=27%  Similarity=0.477  Sum_probs=60.8

Q ss_pred             HHHhHHHHHHHhhhh--hHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHH----HHHHHHcCCCCCcee
Q 013259          290 AVFGMFKCLLRRASL--TETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEET----KDLWVQADIDGNGVV  363 (447)
Q Consensus       290 ~v~~~~~~~~~~~~~--~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~~~~~D~~~~g~i  363 (447)
                      .+++|+.-.-.....  .+.=+|+.+|-|+| ++|...+|...+..+--    ..++++|+    ++++.+.|.|+||++
T Consensus        92 dFlDmfSV~sE~APrdlK~~YAFkIYDfd~D-~~i~~~DL~~~l~~lTr----~eLs~eEv~~i~ekvieEAD~DgDgkl  166 (189)
T KOG0038|consen   92 DFLDMFSVFSEMAPRDLKAKYAFKIYDFDGD-EFIGHDDLEKTLTSLTR----DELSDEEVELICEKVIEEADLDGDGKL  166 (189)
T ss_pred             HHHHHHHHHHhhChHHhhhhheeEEeecCCC-CcccHHHHHHHHHHHhh----ccCCHHHHHHHHHHHHHHhcCCCCCcc
Confidence            445554433322222  33447999999999 99999999999988730    34788775    678899999999999


Q ss_pred             ehHHHHHHHhcc
Q 013259          364 DYKEFQQRIWKT  375 (447)
Q Consensus       364 ~~~EF~~~~~~~  375 (447)
                      +|.||-.++.+.
T Consensus       167 ~~~eFe~~i~ra  178 (189)
T KOG0038|consen  167 SFAEFEHVILRA  178 (189)
T ss_pred             cHHHHHHHHHhC
Confidence            999999877654

>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B

Probab=98.02  E-value=5.8e-06  Score=50.31  Aligned_cols=30  Identities=23%  Similarity=0.486  Sum_probs=26.6

Q ss_pred             hHHHHhhhhcCCCCCCcccHHHHHHHHH-Hhc
Q 013259          305 TETDAFAFLKADNDGDYITYSGFCEALE-QLN  335 (447)
Q Consensus       305 ~l~~~F~~~D~~~~~G~i~~~el~~~l~-~~g  335 (447)
                      +++++|+.+|+|++ |+|+.+||+.+|+ .+|
T Consensus         1 ~l~~~F~~~D~d~d-G~I~~~el~~~l~~~lG   31 (31)
T PF13405_consen    1 RLREAFKMFDKDGD-GFIDFEELRAILRKSLG   31 (31)
T ss_dssp             HHHHHHHHH-TTSS-SEEEHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHCCCCC-CcCcHHHHHHHHHHhcC
Confidence            47889999999999 9999999999999 576

...

>PLN02964 phosphatidylserine decarboxylase

Probab=98.02  E-value=1e-05  Score=84.07  Aligned_cols=64  Identities=22%  Similarity=0.433  Sum_probs=58.8

Q ss_pred             hHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          305 TETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       305 ~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      .+.++|+.+|.|++ |.|+.+||..+|..+|     ...++++++.+|+.+|.|++|.|+++||.+.|..
T Consensus       180 fi~~mf~~~D~Dgd-G~IdfdEFl~lL~~lg-----~~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~  243 (644)
T PLN02964        180 FARRILAIVDYDED-GQLSFSEFSDLIKAFG-----NLVAANKKEELFKAADLNGDGVVTIDELAALLAL  243 (644)
T ss_pred             HHHHHHHHhCCCCC-CeEcHHHHHHHHHHhc-----cCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence            47889999999999 9999999999999988     7789999999999999999999999999977644

>PLN02964 phosphatidylserine decarboxylase

Probab=98.02  E-value=9.9e-06  Score=84.16  Aligned_cols=65  Identities=14%  Similarity=0.324  Sum_probs=56.7

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHH---HHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEE---TKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~---~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ..+.++++++|..+|+|++ |+|    |+.+++.+|+    ..+++++   ++.+|+.+|.|++|.|+|+||+.+|.
T Consensus       139 ~kqi~elkeaF~lfD~dgd-G~i----Lg~ilrslG~----~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~  206 (644)
T PLN02964        139 TQEPESACESFDLLDPSSS-NKV----VGSIFVSCSI----EDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIK  206 (644)
T ss_pred             HHHHHHHHHHHHHHCCCCC-CcC----HHHHHHHhCC----CCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence            5566899999999999999 997    9999999982    2577776   89999999999999999999997664

>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A

Probab=97.98  E-value=2.7e-05  Score=61.84  Aligned_cols=64  Identities=23%  Similarity=0.361  Sum_probs=56.0

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ........+|..+|. ++ |+|+.++.+.+|.+.|       ++.+.+.+|....|.|+||.++++||+-+|.
T Consensus         7 ~e~~~y~~~F~~l~~-~~-g~isg~~a~~~f~~S~-------L~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~   70 (104)
T PF12763_consen    7 EEKQKYDQIFQSLDP-QD-GKISGDQAREFFMKSG-------LPRDVLAQIWNLADIDNDGKLDFEEFAIAMH   70 (104)
T ss_dssp             CHHHHHHHHHHCTSS-ST-TEEEHHHHHHHHHHTT-------SSHHHHHHHHHHH-SSSSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCC-CC-CeEeHHHHHHHHHHcC-------CCHHHHHHHHhhhcCCCCCcCCHHHHHHHHH
Confidence            355677889999984 68 9999999999999977       8999999999999999999999999996663

...

>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=97.84  E-value=5e-05  Score=67.05  Aligned_cols=69  Identities=20%  Similarity=0.347  Sum_probs=52.8

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHh-ccCCC-----CCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQL-NLTGH-----KHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~-g~~~~-----~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      +.+.=+|+.+|.|++ |+|+..|+-.+++.+ -+.+.     ...-.++-+.++++.+|.|+||.|+++||+..+.
T Consensus       100 ekl~w~F~lyD~dgd-G~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~  174 (193)
T KOG0044|consen  100 EKLKWAFRLYDLDGD-GYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCK  174 (193)
T ss_pred             HHhhhhheeecCCCC-ceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhh
Confidence            344556999999999 999999998887764 11111     1222455689999999999999999999997663

>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=97.82  E-value=2e-05  Score=73.41  Aligned_cols=64  Identities=19%  Similarity=0.317  Sum_probs=51.4

Q ss_pred             HHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhcc
Q 013259          307 TDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT  375 (447)
Q Consensus       307 ~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~  375 (447)
                      ++-|+.-|.|++ |.++.+||-.+|.--.    ...+.+--++.-|...|+|+||+|+++||+.-|+..
T Consensus       166 e~rFk~AD~d~d-g~lt~EEF~aFLHPEe----~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~  229 (325)
T KOG4223|consen  166 EERFKAADQDGD-GSLTLEEFTAFLHPEE----HPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSH  229 (325)
T ss_pred             HHHHhhcccCCC-CcccHHHHHhccChhh----cchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhc
Confidence            456999999999 9999999999874321    133445557889999999999999999999877653

>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A

Probab=97.76  E-value=8.7e-05  Score=49.82  Aligned_cols=46  Identities=20%  Similarity=0.379  Sum_probs=38.1

Q ss_pred             cccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHH
Q 013259          321 YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQR  371 (447)
Q Consensus       321 ~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~  371 (447)
                      +++..|++.+|+.++     ..++++.+..+|+++|++++|+++.+||+..
T Consensus         1 kmsf~Evk~lLk~~N-----I~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~F   46 (51)
T PF14788_consen    1 KMSFKEVKKLLKMMN-----IEMDDEYARQLFQECDKSQSGRLEGEEFEEF   46 (51)
T ss_dssp             EBEHHHHHHHHHHTT---------HHHHHHHHHHH-SSSSSEBEHHHHHHH
T ss_pred             CCCHHHHHHHHHHHc-----cCcCHHHHHHHHHHhcccCCCCccHHHHHHH
Confidence            468899999999999     7899999999999999999999999999854

...

>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=97.68  E-value=0.00012  Score=64.72  Aligned_cols=66  Identities=24%  Similarity=0.316  Sum_probs=55.4

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ....-...+|+.||+|++ |.|+..||-.+|..+-     ..-.++.+.=.|+.+|.|+||.|+++|++..+
T Consensus        61 d~~~y~~~vF~~fD~~~d-g~i~F~Efi~als~~~-----rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv  126 (193)
T KOG0044|consen   61 DASKYAELVFRTFDKNKD-GTIDFLEFICALSLTS-----RGTLEEKLKWAFRLYDLDGDGYITKEEMLKIV  126 (193)
T ss_pred             CHHHHHHHHHHHhcccCC-CCcCHHHHHHHHHHHc-----CCcHHHHhhhhheeecCCCCceEcHHHHHHHH
Confidence            444556778999999999 9999999888887764     44667778888999999999999999998665

>PF14529 Exo_endo_phos_2: Endonuclease-reverse transcriptase ; PDB: 2EI9_A 1WDU_B

Probab=97.67  E-value=6.1e-05  Score=61.60  Aligned_cols=88  Identities=20%  Similarity=0.355  Sum_probs=38.3

Q ss_pred             EEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCC------------chhHhhhhCCC
Q 013259          170 ILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRG------------HVYKFLRSQGF  237 (447)
Q Consensus       170 l~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s------------~~~~~l~~~g~  237 (447)
                      |+|+|+  |.|+..        ....+.+.+.++....  ...++||+||||.....            ...+.+...++
T Consensus         1 i~i~~v--Y~pp~~--------~~~~~~~~l~~~~~~~--~~~~~Ii~GDFN~~~~~w~~~~~~~~~~~~l~~~~~~~~l   68 (119)
T PF14529_consen    1 ITIISV--YAPPSS--------EREEFFDQLRQLLKNL--PPAPIIIGGDFNAHHPNWDSSNTNSRRGEQLLDWLDSHNL   68 (119)
T ss_dssp             EEEEEE--E--TTS---------CHHHHHHHHHHHHCC--TTSSEEEEEE-----GGGT-SCHHHHHHHHHHHHHHHCTE
T ss_pred             CEEEEE--ECCCCc--------cHHHHHHHHHHHHHhC--CCCCEEEEeECCCCchhhhhccccchhHHHHHHHhhhcee
Confidence            578888  777643        2233344444444432  22389999999995321            11223333344


Q ss_pred             cccccccccCCCCCCCceeecccCCCccccccceeccCcchh
Q 013259          238 VSSYDTAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKY  279 (447)
Q Consensus       238 ~d~~~~~~~~~~~~~~tw~~~~~~~~~~~rIDyI~~~~~~~~  279 (447)
                      .+.    +.  ....+||.....    ..+||+||++.....
T Consensus        69 ~~~----~~--~~~~~T~~~~~~----~s~iD~~~~s~~~~~  100 (119)
T PF14529_consen   69 VDL----NP--PGRPPTFISNSH----GSRIDLILTSDNLLS  100 (119)
T ss_dssp             EE---------TT---SEEECCC----EE--EEEEEECCGCC
T ss_pred             eee----ec--CCCCCcccCCCC----CceEEEEEECChHHh
Confidence            322    11  122356655442    578999999866543

>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A

Probab=97.66  E-value=4.7e-05  Score=43.62  Aligned_cols=25  Identities=28%  Similarity=0.469  Sum_probs=22.6

Q ss_pred             HHHHhhhhcCCCCCCcccHHHHHHHH
Q 013259          306 ETDAFAFLKADNDGDYITYSGFCEAL  331 (447)
Q Consensus       306 l~~~F~~~D~~~~~G~i~~~el~~~l  331 (447)
                      |+++|+.+|.|+| |.|+.+||+.++
T Consensus         1 l~~~F~~~D~d~D-G~is~~E~~~~~   25 (25)
T PF13202_consen    1 LKDAFQQFDTDGD-GKISFEEFQRLV   25 (25)
T ss_dssp             HHHHHHHHTTTSS-SEEEHHHHHHHH
T ss_pred             CHHHHHHHcCCCC-CcCCHHHHHHHC
Confidence            5679999999999 999999999864

...

>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A

Probab=97.61  E-value=9.2e-05  Score=42.41  Aligned_cols=24  Identities=42%  Similarity=0.735  Sum_probs=21.6

Q ss_pred             HHHHHHHcCCCCCceeehHHHHHH
Q 013259          348 TKDLWVQADIDGNGVVDYKEFQQR  371 (447)
Q Consensus       348 ~~~~~~~~D~~~~g~i~~~EF~~~  371 (447)
                      ++++|+.+|.|+||.|+++||.+.
T Consensus         1 l~~~F~~~D~d~DG~is~~E~~~~   24 (25)
T PF13202_consen    1 LKDAFQQFDTDGDGKISFEEFQRL   24 (25)
T ss_dssp             HHHHHHHHTTTSSSEEEHHHHHHH
T ss_pred             CHHHHHHHcCCCCCcCCHHHHHHH
Confidence            467999999999999999999864

...

>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]

Probab=97.50  E-value=0.00019  Score=70.75  Aligned_cols=71  Identities=21%  Similarity=0.353  Sum_probs=60.4

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      +....++.+.|..+| |++ |+|+..||..++.+.++.  ......++++.++...+.|.+|.|+|+||+..+..
T Consensus        15 q~El~~l~~kF~~~d-~~~-G~v~~~~l~~~f~k~~~~--~g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~~   85 (627)
T KOG0046|consen   15 QEELRELKEKFNKLD-DQK-GYVTVYELPDAFKKAKLP--LGYFVREEIKEILGEVGVDADGRVEFEEFVGIFLN   85 (627)
T ss_pred             HHHHHHHHHHHHhhc-CCC-CeeehHHhHHHHHHhccc--ccchhHHHHHHHHhccCCCcCCccCHHHHHHHHHh
Confidence            556778999999999 999 999999999999987631  12356899999999999999999999999975544

>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional

Probab=97.49  E-value=0.00014  Score=71.84  Aligned_cols=52  Identities=15%  Similarity=0.365  Sum_probs=45.7

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ....++.+|+.+|.|++ |+|+.+||.      |            ++.+|..+|.|+||.|+++||...+
T Consensus       332 ~~~~l~~aF~~~D~dgd-G~Is~~E~~------~------------~~~~F~~~D~d~DG~Is~eEf~~~~  383 (391)
T PRK12309        332 FTHAAQEIFRLYDLDGD-GFITREEWL------G------------SDAVFDALDLNHDGKITPEEMRAGL  383 (391)
T ss_pred             hhHHHHHHHHHhCCCCC-CcCcHHHHH------H------------HHHHHHHhCCCCCCCCcHHHHHHHH
Confidence            44578889999999999 999999983      3            4679999999999999999999766

>KOG0566 consensus Inositol-1,4,5-triphosphate 5-phosphatase (synaptojanin), INP51/INP52/INP53 family [Intracellular trafficking, secretion, and vesicular transport]

Probab=97.39  E-value=0.00064  Score=71.63  Aligned_cols=164  Identities=16%  Similarity=0.072  Sum_probs=79.9

Q ss_pred             ceeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhC-------CCcE--EEEccccc--------C---
Q 013259           29 CITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYE-------RSSI--ICLQEFWV--------G---   88 (447)
Q Consensus        29 ~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~-------~~DI--I~LQEv~~--------~---   88 (447)
                      .+-|.||||.+-    ..        .        ...-+.+||...       -|||  |+||||-.        .   
T Consensus       538 ~IfvgTfNvNG~----s~--------~--------~k~~L~~WLfp~s~~~~~~~aDIyviG~eEvVeLnag~iv~As~t  597 (1080)
T KOG0566|consen  538 SIFVGTFNVNGR----SA--------A--------FKDDLSDWLFPISRGKEFSPADIYVIGFEEVVELNAGNIVSASTT  597 (1080)
T ss_pred             EEEEEeeeccCc----cc--------c--------chhhHHhhccccccCCcCCcCcEEEEeehhhhhcCccceeccChH
Confidence            467889999951    00        0        123455555433       3775  67899920        0   


Q ss_pred             -hhhHHHHHHHHhhhcCCcEEEecCCCCCCceE--EEEEecCCceEeeeEEEEecCCC--Cchhhhhhhccccccccccc
Q 013259           89 -NEELVDMYEKRLSDAGYVNFKLARTNNRGDGL--LTAVHKDYFRVVNYRDLLFNDFG--DRVAQLLHVELIDPFSQCRN  163 (447)
Q Consensus        89 -~~~~~~~l~~~l~~~gy~~~~~~~~~~~~~G~--ai~~rs~~~~i~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~  163 (447)
                       ..-|...+...|..+.-.|+...  ...-.|+  .+|+|....|.+......-..++  +..+.       ...+..+.
T Consensus       598 k~~~Wee~i~~~Ln~~~~kYvlL~--s~QlvGv~L~iF~r~~~~p~Ik~V~~~tkKTGfGG~tgN-------KGAVAIrf  668 (1080)
T KOG0566|consen  598 KRRFWEEKILKTLNRYKNKYVLLR--SEQLVGVCLLLFIRPDHAPYIKDVAGDTKKTGFGGATGN-------KGAVAIRF  668 (1080)
T ss_pred             HHHHHHHHHHHHhcCCCCceEEEe--hhhhheeeEEEEEcccccchhhhcccceeecccccccCC-------CceEEEEE
Confidence             12255566666664433333321  1222354  45556665555543322221111  10000       00011233


Q ss_pred             CCCCCeEEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCc
Q 013259          164 GDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGS  223 (447)
Q Consensus       164 ~~~g~~l~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~  223 (447)
                      ......|+++|.||.++..  ....|..-...+.+-|.=-....-....-|+.|||||-.
T Consensus       669 ~~~~TsfCFv~SHlAAG~s--nv~ERn~DY~tI~r~l~Fp~Gr~I~~HD~ifW~GDFNYR  726 (1080)
T KOG0566|consen  669 VYHATSFCFVCSHLAAGQS--NVEERNEDYKTIARKLRFPRGRMIFSHDYIFWLGDFNYR  726 (1080)
T ss_pred             EeccccEEEEecccccccc--hHhhhhhhHHHHHHhccccCCccccCCceEEEeccccee
Confidence            3456789999999977442  334455444444433321000000134569999999964

>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=97.37  E-value=0.00019  Score=67.10  Aligned_cols=69  Identities=16%  Similarity=0.280  Sum_probs=58.2

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      .+....+..+|..+|.+++ |+|+.+||+.-+...-     .....+++.+-+...|.|.||.|+|+|+...++.
T Consensus        73 ee~~~rl~~l~~~iD~~~D-gfv~~~El~~wi~~s~-----k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~  141 (325)
T KOG4223|consen   73 EESQERLGKLVPKIDSDSD-GFVTESELKAWIMQSQ-----KKYVVEEAARRWDEYDKNKDGFITWEEYLPQTYG  141 (325)
T ss_pred             chhHHHHHHHHhhhcCCCC-CceeHHHHHHHHHHHH-----HHHHHHHHHHHHHHhccCccceeeHHHhhhhhhh
Confidence            4567788999999999999 9999999998776543     4455667788888999999999999999987765

>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins

Probab=97.35  E-value=9.5e-05  Score=59.87  Aligned_cols=60  Identities=13%  Similarity=0.200  Sum_probs=44.8

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHH
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ  369 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~  369 (447)
                      ....+.=.|..+|.|+| |.|+..||+.+...+.       ..+..++.+++.+|.|+||.|++.|+.
T Consensus        52 ~~~~~~W~F~~LD~n~d-~~L~~~El~~l~~~l~-------~~e~C~~~F~~~CD~n~d~~Is~~EW~  111 (113)
T PF10591_consen   52 CKRVVHWKFCQLDRNKD-GVLDRSELKPLRRPLM-------PPEHCARPFFRSCDVNKDGKISLDEWC  111 (113)
T ss_dssp             GHHHHHHHHHHH--T-S-SEE-TTTTGGGGSTTS-------TTGGGHHHHHHHH-TT-SSSEEHHHHH
T ss_pred             hhhhhhhhHhhhcCCCC-CccCHHHHHHHHHHHh-------hhHHHHHHHHHHcCCCCCCCCCHHHHc
Confidence            44455556999999999 9999999998865443       667789999999999999999999996

SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.

>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B

Probab=97.04  E-value=0.00092  Score=40.45  Aligned_cols=27  Identities=22%  Similarity=0.550  Sum_probs=22.8

Q ss_pred             HHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          347 ETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       347 ~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      +++.+|+.+|.|+||.|+++||...+.
T Consensus         1 ~l~~~F~~~D~d~dG~I~~~el~~~l~   27 (31)
T PF13405_consen    1 RLREAFKMFDKDGDGFIDFEELRAILR   27 (31)
T ss_dssp             HHHHHHHHH-TTSSSEEEHHHHHHHHH
T ss_pred             CHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence            478899999999999999999996653

...

>KOG4065 consensus Uncharacterized conserved protein [Function unknown]

Probab=97.00  E-value=0.0019  Score=50.79  Aligned_cols=62  Identities=23%  Similarity=0.418  Sum_probs=46.2

Q ss_pred             HhhhhcCCCCCCcccHHHHHHHHHHhc---cC-CCCCC-CCHHHHHHHH----HHcCCCCCceeehHHHHHH
Q 013259          309 AFAFLKADNDGDYITYSGFCEALEQLN---LT-GHKHG-LADEETKDLW----VQADIDGNGVVDYKEFQQR  371 (447)
Q Consensus       309 ~F~~~D~~~~~G~i~~~el~~~l~~~g---~~-~~~~~-~~~~~~~~~~----~~~D~~~~g~i~~~EF~~~  371 (447)
                      .|...|-|++ |+|+--||..++.-.-   -. +++.+ .++.|++.|+    +.-|.|+||.|+|.||++.
T Consensus        72 YF~MHDldkn-n~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgEflK~  142 (144)
T KOG4065|consen   72 YFSMHDLDKN-NFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGEFLKR  142 (144)
T ss_pred             hhhhhccCcC-CcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHHHHhh
Confidence            5889999999 9999999999886431   01 22444 4566665555    5568999999999999864

>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]

Probab=96.92  E-value=0.0016  Score=71.36  Aligned_cols=69  Identities=14%  Similarity=0.214  Sum_probs=60.0

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCC--CHH-----HHHHHHHHcCCCCCceeehHHHHHHHhcc
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGL--ADE-----ETKDLWVQADIDGNGVVDYKEFQQRIWKT  375 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~--~~~-----~~~~~~~~~D~~~~g~i~~~EF~~~~~~~  375 (447)
                      ..++.-+|+.||++.+ |.++..+|+.||+.+|     ..+  .++     +++.+|..+|++.+|.|+..||+++|..+
T Consensus      2252 L~EFs~~fkhFDkek~-G~Ldhq~F~sCLrslg-----Y~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~~ 2325 (2399)
T KOG0040|consen 2252 LKEFSMMFKHFDKEKN-GRLDHQHFKSCLRSLG-----YDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMISK 2325 (2399)
T ss_pred             HHHHHHHHHHhchhhc-cCCcHHHHHHHHHhcC-----CCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHHhc
Confidence            3466678999999999 9999999999999998     555  233     79999999999999999999999999775


Q ss_pred             Cc
Q 013259          376 TW  377 (447)
Q Consensus       376 ~~  377 (447)
                      ..
T Consensus      2326 ET 2327 (2399)
T KOG0040|consen 2326 ET 2327 (2399)
T ss_pred             cc
Confidence            54

>KOG1294 consensus Apurinic/apyrimidinic endonuclease and related enzymes [Replication, recombination and repair]

Probab=96.77  E-value=0.0028  Score=61.02  Aligned_cols=109  Identities=21%  Similarity=0.320  Sum_probs=61.9

Q ss_pred             CCeEEEEEecccCCCCCCCchhhHHHH--HHHHHHHHHHHHHcC---CCCCcEEEeecCCCccCCc--------------
Q 013259          167 RQEILIVNTHLLFPHDSSLSLVRLHQV--YKILQHVESYQKEHN---LKPIPIILCGDWNGSKRGH--------------  227 (447)
Q Consensus       167 g~~l~v~n~HL~~~~~~~~~~~R~~q~--~~l~~~l~~~~~~~~---~~~~pvIl~GDFN~~p~s~--------------  227 (447)
                      -..+.++++|+..-   .....++...  ...-..++....+..   ....|++.|||.|..+...              
T Consensus       166 ~e~~~l~~~y~p~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~v~~gd~nvs~~~i~~~~~~~~~~~~~~  242 (335)
T KOG1294|consen  166 FEIFILINTYVPNI---GGGLVNLVYRILDRWDKEIEEKRKKQSSSKNLKAPVVICGDLNVSHEEIDPSKPLVSPAGNTL  242 (335)
T ss_pred             ecceeeccccCccc---ccccchhhhhhhhhhHHHHHHHhhhccccccccCcceeccccccchhhccccccccccccCCc
Confidence            45677888866321   1222233222  223333333333322   2235899999999864311              


Q ss_pred             -----------hh-HhhhhCC-CcccccccccCCCCCCCceeecc--cCCCccccccceeccCcch
Q 013259          228 -----------VY-KFLRSQG-FVSSYDTAHQYTDADAHKWVSHR--NHRGNICGVDFIWLLNPNK  278 (447)
Q Consensus       228 -----------~~-~~l~~~g-~~d~~~~~~~~~~~~~~tw~~~~--~~~~~~~rIDyI~~~~~~~  278 (447)
                                 .+ ..+.+.| ++|+|...+......+..|....  ...+...++||+.++.+..
T Consensus       243 ~~~~~t~e~R~~~~~~~~~~~~~iDt~r~~~~~~~~~~t~Wk~~~~~r~~~~~~r~dy~~Vsk~~~  308 (335)
T KOG1294|consen  243 SNAGFTPEERDSFFAELLEKGPLIDTYRELHKDQKKAYTFWKYMPNGRQRGHGERCDYILVSKPGP  308 (335)
T ss_pred             CCCCCCHHHhhhHHHhhccCCcceeehhhhcCCccccccchhhccccccCCCCCceeEEEecCcCC
Confidence                       12 3344555 88999888776554566676543  2335567999999987654

>KOG4251 consensus Calcium binding protein [General function prediction only]

Probab=96.62  E-value=0.0013  Score=58.76  Aligned_cols=65  Identities=22%  Similarity=0.318  Sum_probs=49.7

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHH-HHhccCCCCCCC--CHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEAL-EQLNLTGHKHGL--ADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l-~~~g~~~~~~~~--~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ....|..+|...|.|.| |+||..|+++-+ +++.     ..+  ..++-+..|+..|.|+||.|+++||.--.
T Consensus        99 srrklmviFsKvDVNtD-rkisAkEmqrwImekta-----EHfqeameeSkthFraVDpdgDGhvsWdEykvkF  166 (362)
T KOG4251|consen   99 SRRKLMVIFSKVDVNTD-RKISAKEMQRWIMEKTA-----EHFQEAMEESKTHFRAVDPDGDGHVSWDEYKVKF  166 (362)
T ss_pred             HHHHHHHHHhhcccCcc-ccccHHHHHHHHHHHHH-----HHHHHHHhhhhhheeeeCCCCCCceehhhhhhHH
Confidence            44577889999999999 999999998755 4433     222  22345667889999999999999996433

>smart00054 EFh EF-hand, calcium binding motif

Probab=96.11  E-value=0.0072  Score=34.78  Aligned_cols=28  Identities=25%  Similarity=0.475  Sum_probs=25.1

Q ss_pred             hHHHHhhhhcCCCCCCcccHHHHHHHHHH
Q 013259          305 TETDAFAFLKADNDGDYITYSGFCEALEQ  333 (447)
Q Consensus       305 ~l~~~F~~~D~~~~~G~i~~~el~~~l~~  333 (447)
                      +++++|..+|.+++ |.|+..||..+++.
T Consensus         1 ~~~~~f~~~d~~~~-g~i~~~e~~~~~~~   28 (29)
T smart00054        1 ELKEAFRLFDKDGD-GKIDFEEFKDLLKA   28 (29)
T ss_pred             CHHHHHHHHCCCCC-CcEeHHHHHHHHHh
Confidence            36789999999999 99999999999875

EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.

>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C

Probab=95.79  E-value=0.023  Score=43.20  Aligned_cols=66  Identities=20%  Similarity=0.328  Sum_probs=53.3

Q ss_pred             hHHHHhhhhcCCCCCCcccHHHHHHHHHHh-ccCCCCCCCCHHHHHHHHHHcCCC----CCceeehHHHHHHHhccC
Q 013259          305 TETDAFAFLKADNDGDYITYSGFCEALEQL-NLTGHKHGLADEETKDLWVQADID----GNGVVDYKEFQQRIWKTT  376 (447)
Q Consensus       305 ~l~~~F~~~D~~~~~G~i~~~el~~~l~~~-g~~~~~~~~~~~~~~~~~~~~D~~----~~g~i~~~EF~~~~~~~~  376 (447)
                      ++..+|..+-. +. +.||.++|+..|+.- |.    ...+.++++.+|..+..+    ..+.+++++|..+|..+.
T Consensus         1 ei~~if~~ys~-~~-~~mt~~~f~~FL~~eQ~~----~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S~~   71 (83)
T PF09279_consen    1 EIEEIFRKYSS-DK-EYMTAEEFRRFLREEQGE----PRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFSDE   71 (83)
T ss_dssp             HHHHHHHHHCT-TS-SSEEHHHHHHHHHHTSS-----TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHSTT
T ss_pred             CHHHHHHHHhC-CC-CcCCHHHHHHHHHHHhcc----ccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCCCc
Confidence            46788999954 67 899999999999865 30    246899999999998655    468999999999887654

It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....

>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]

Probab=95.73  E-value=0.056  Score=52.74  Aligned_cols=84  Identities=18%  Similarity=0.323  Sum_probs=59.6

Q ss_pred             HHHHhHHHHHHHhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh-ccCCCCC--------------------------
Q 013259          289 EAVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQL-NLTGHKH--------------------------  341 (447)
Q Consensus       289 ~~v~~~~~~~~~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~-g~~~~~~--------------------------  341 (447)
                      +..+..+...+.+...+|...|+.+|.+++ |+|+......+|+++ |+.=.|.                          
T Consensus       449 eSAlk~Lrerl~s~~sdL~~eF~~~D~~ks-G~lsis~Wa~~mE~i~~L~LPWr~L~~kla~~s~d~~v~Y~~~~~~l~~  527 (631)
T KOG0377|consen  449 ESALKELRERLRSHRSDLEDEFRKYDPKKS-GKLSISHWAKCMENITGLNLPWRLLRPKLANGSDDGKVEYKSTLDNLDT  527 (631)
T ss_pred             HHHHHHHHHHHHhhhhHHHHHHHhcChhhc-CeeeHHHHHHHHHHHhcCCCcHHHhhhhccCCCcCcceehHhHHHHhhh
Confidence            344445555556677789999999999999 999999999999863 3220000                          


Q ss_pred             -CCCH--------------HHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          342 -GLAD--------------EETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       342 -~~~~--------------~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                       .+.+              ..++.+|+.+|.|++|.|+.+||.. +|.
T Consensus       528 e~~~~ea~~slvetLYr~ks~LetiF~~iD~D~SG~isldEF~~-a~~  574 (631)
T KOG0377|consen  528 EVILEEAGSSLVETLYRNKSSLETIFNIIDADNSGEISLDEFRT-AWK  574 (631)
T ss_pred             hhHHHHHHhHHHHHHHhchhhHHHHHHHhccCCCCceeHHHHHH-HHH
Confidence             0001              1246788899999999999999984 443

>smart00054 EFh EF-hand, calcium binding motif

Probab=95.65  E-value=0.013  Score=33.62  Aligned_cols=26  Identities=35%  Similarity=0.685  Sum_probs=22.8

Q ss_pred             HHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          347 ETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       347 ~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      +++.+++.+|.+++|.|+++||...+
T Consensus         1 ~~~~~f~~~d~~~~g~i~~~e~~~~~   26 (29)
T smart00054        1 ELKEAFRLFDKDGDGKIDFEEFKDLL   26 (29)
T ss_pred             CHHHHHHHHCCCCCCcEeHHHHHHHH
Confidence            36789999999999999999998655

EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.

>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]

Probab=95.49  E-value=0.041  Score=48.65  Aligned_cols=62  Identities=16%  Similarity=0.310  Sum_probs=48.5

Q ss_pred             hHHHHhhhhcCCCCCCc-ccHHHHHHHHHHhccCCCCCCC-CHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          305 TETDAFAFLKADNDGDY-ITYSGFCEALEQLNLTGHKHGL-ADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       305 ~l~~~F~~~D~~~~~G~-i~~~el~~~l~~~g~~~~~~~~-~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      -...+|..||.+++ |. |+.+++-.+|..+-     .+- .++.++-.++.+|.+++|.|+.+|+.+.+
T Consensus        67 ~~~rI~~~f~~~~~-~~~v~F~~Fv~~ls~f~-----~~~~~~~Kl~faF~vYD~~~~G~I~reel~~iv  130 (187)
T KOG0034|consen   67 LADRIIDRFDTDGN-GDPVDFEEFVRLLSVFS-----PKASKREKLRFAFRVYDLDGDGFISREELKQIL  130 (187)
T ss_pred             HHHHHHHHHhccCC-CCccCHHHHHHHHhhhc-----CCccHHHHHHHHHHHhcCCCCCcCcHHHHHHHH
Confidence            44567888888888 77 99999888887764     333 33478888999999999999999998655

>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]

Probab=95.27  E-value=0.014  Score=56.77  Aligned_cols=71  Identities=18%  Similarity=0.178  Sum_probs=47.6

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHH------hccCCCCCCCCHH-----HHH--HHHHHcCCCCCceeehH
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQ------LNLTGHKHGLADE-----ETK--DLWVQADIDGNGVVDYK  366 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~------~g~~~~~~~~~~~-----~~~--~~~~~~D~~~~g~i~~~  366 (447)
                      .......+-+|+.||.||+ |-|+.+||....+-      +|.. |...++..     ++.  -...-|.++++++++++
T Consensus       229 S~p~~~F~IAFKMFD~dgn-G~IdkeEF~~v~~li~sQ~~~g~~-hrd~~tt~~s~~~~~nsaL~~yFFG~rg~~kLs~d  306 (489)
T KOG2643|consen  229 SIPERNFRIAFKMFDLDGN-GEIDKEEFETVQQLIRSQTSVGVR-HRDHFTTGNSFKVEVNSALLTYFFGKRGNGKLSID  306 (489)
T ss_pred             ccCcccceeeeeeeecCCC-CcccHHHHHHHHHHHHhcccccee-cccCccccceehhhhhhhHHHHhhccCCCccccHH
Confidence            4556677789999999999 99999999887643      2311 00011111     121  13455788999999999


Q ss_pred             HHHHHH
Q 013259          367 EFQQRI  372 (447)
Q Consensus       367 EF~~~~  372 (447)
                      ||++.+
T Consensus       307 eF~~F~  312 (489)
T KOG2643|consen  307 EFLKFQ  312 (489)
T ss_pred             HHHHHH
Confidence            998766

>KOG2243 consensus Ca2+ release channel (ryanodine receptor) [Signal transduction mechanisms]

Probab=95.20  E-value=0.039  Score=60.26  Aligned_cols=81  Identities=26%  Similarity=0.405  Sum_probs=63.9

Q ss_pred             hhHHHHhHHHHHHHhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehH
Q 013259          287 WSEAVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYK  366 (447)
Q Consensus       287 w~~~v~~~~~~~~~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~  366 (447)
                      .++.++..++..+.-+...-...|+.+|.||. |.||..||.++|...      ...++.+++-++.....|.+...+|+
T Consensus      4040 nvemilkffdmflklkdltssdtfkeydpdgk-giiskkdf~kame~~------k~ytqse~dfllscae~dend~~~y~ 4112 (5019)
T KOG2243|consen 4040 NVEMILKFFDMFLKLKDLTSSDTFKEYDPDGK-GIISKKDFHKAMEGH------KHYTQSEIDFLLSCAEADENDMFDYE 4112 (5019)
T ss_pred             cHHHHHHHHHHHHHHhhccccccchhcCCCCC-ccccHHHHHHHHhcc------ccchhHHHHHHHHhhccCccccccHH
Confidence            34555555555554444444567999999999 999999999999864      34789999999999999999999999


Q ss_pred             HHHHHHhc
Q 013259          367 EFQQRIWK  374 (447)
Q Consensus       367 EF~~~~~~  374 (447)
                      +|+.....
T Consensus      4113 dfv~rfhe 4120 (5019)
T KOG2243|consen 4113 DFVDRFHE 4120 (5019)
T ss_pred             HHHHHhcC
Confidence            99977643

>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A

Probab=95.18  E-value=0.024  Score=39.03  Aligned_cols=32  Identities=19%  Similarity=0.395  Sum_probs=28.2

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHH
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQ  333 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~  333 (447)
                      -...++..+|..+|.|++ |+|+.+||..+|..
T Consensus        22 ~s~~e~~~l~~~~D~~~~-G~I~~~EF~~~~~~   53 (54)
T PF13833_consen   22 LSEEEVDRLFREFDTDGD-GYISFDEFISMMQR   53 (54)
T ss_dssp             SCHHHHHHHHHHHTTSSS-SSEEHHHHHHHHHH
T ss_pred             CCHHHHHHHHHhcccCCC-CCCCHHHHHHHHHh
Confidence            345679999999999999 99999999999864

...

>PTZ00312 inositol-1,4,5-triphosphate 5-phosphatase; Provisional

Probab=93.77  E-value=0.085  Score=49.06  Aligned_cols=62  Identities=18%  Similarity=0.228  Sum_probs=37.2

Q ss_pred             cCCCCCeEEEEEecccCCCCC---------CCchhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCCch
Q 013259          163 NGDLRQEILIVNTHLLFPHDS---------SLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHV  228 (447)
Q Consensus       163 ~~~~g~~l~v~n~HL~~~~~~---------~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~  228 (447)
                      ....+..|.++|+||.....+         -+...|..-...+++.+....    .+..|+++.||||.--+...
T Consensus        75 w~i~~t~fdfVNiHLFHDaSNl~A~~tSPSiYS~~RqrAL~~iL~r~~~~~----~~~~~lF~fGDfNyRld~~~  145 (356)
T PTZ00312         75 LRLGTVVVNVLNVHLYNDDDNRVAAASSPSLYTGQRQEALLEAIAECSAFI----SPSDPLFIFGDFNVRLDGHN  145 (356)
T ss_pred             EEECCEEEEEEEeeccCCcchhhHHhcCCchhHHHHHHHHHHHHHHHhhcc----CCCCcEEEeccceeeecccc
Confidence            344567899999999763211         123334444444444333322    26789999999998655433

>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E

Probab=93.76  E-value=0.088  Score=37.78  Aligned_cols=27  Identities=22%  Similarity=0.454  Sum_probs=23.9

Q ss_pred             HHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          348 TKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       348 ~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ++.+|+.+|.|++|.|+.+||...+..
T Consensus         2 l~~~F~~~D~d~~G~i~~~el~~~~~~   28 (66)
T PF13499_consen    2 LKEAFKKFDKDGDGYISKEELRRALKH   28 (66)
T ss_dssp             HHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHcCCccCCCCHHHHHHHHHH
Confidence            678999999999999999999976633

...

>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=93.61  E-value=0.086  Score=54.87  Aligned_cols=66  Identities=23%  Similarity=0.386  Sum_probs=58.8

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ......+++|..+|+..+ |++|-..-+.+|..-|       ++...+-.|..--|.|+||+++-+||+-.|+.
T Consensus       192 ~~klKY~QlFNa~Dktrs-G~Lsg~qaR~aL~qS~-------Lpq~~LA~IW~LsDvd~DGkL~~dEfilam~l  257 (1118)
T KOG1029|consen  192 HNKLKYRQLFNALDKTRS-GYLSGQQARSALGQSG-------LPQNQLAHIWTLSDVDGDGKLSADEFILAMHL  257 (1118)
T ss_pred             hhhhHHHHHhhhcccccc-cccccHHHHHHHHhcC-------CchhhHhhheeeeccCCCCcccHHHHHHHHHH
Confidence            455678999999999999 9999999999998866       88889999999999999999999999876643

>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]

Probab=92.81  E-value=0.046  Score=53.37  Aligned_cols=50  Identities=20%  Similarity=0.240  Sum_probs=42.9

Q ss_pred             CcccHHHHHHHHHHh-ccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          320 DYITYSGFCEALEQL-NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       320 G~i~~~el~~~l~~~-g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      +.|+..+|+++.... |     ..+++.-++-+|.-||.|+||.++.+||+..|-+
T Consensus       403 ~~i~~~~f~raa~~vtG-----veLSdhVvdvvF~IFD~N~Dg~LS~~EFl~Vmk~  453 (489)
T KOG2643|consen  403 ASIDEKTFQRAAKVVTG-----VELSDHVVDVVFTIFDENNDGTLSHKEFLAVMKR  453 (489)
T ss_pred             CCCCHHHHHHHHHHhcC-----cccccceeeeEEEEEccCCCCcccHHHHHHHHHH
Confidence            778999998887654 7     7788888888999999999999999999976643

>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes

Probab=92.61  E-value=0.05  Score=39.49  Aligned_cols=57  Identities=21%  Similarity=0.303  Sum_probs=38.5

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCC-------CceeehHHHHHHH
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDG-------NGVVDYKEFQQRI  372 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~-------~g~i~~~EF~~~~  372 (447)
                      ..+.+.++|+.+ .++. ++||..||++.|.            .++++-+++.+..-.       .|..||..|+..|
T Consensus         4 s~eqv~~aFr~l-A~~K-pyVT~~dLr~~l~------------pe~aey~~~~Mp~~~~~~~~~~~~~~DY~~f~~~l   67 (69)
T PF08726_consen    4 SAEQVEEAFRAL-AGGK-PYVTEEDLRRSLT------------PEQAEYCISRMPPYEGPDGDAIPGAYDYESFTNSL   67 (69)
T ss_dssp             TCHHHHHHHHHH-CTSS-SCEEHHHHHHHS-------------CCCHHHHHCCSEC--SSS----TTEEECHHHHCCC
T ss_pred             CHHHHHHHHHHH-HcCC-CcccHHHHHHHcC------------cHHHHHHHHHCcccCCCCcCCCCCCcCHHHHHHHH
Confidence            456788999999 7788 9999999998853            222344444433222       2789999998543

EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.

>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=92.11  E-value=0.23  Score=50.30  Aligned_cols=64  Identities=30%  Similarity=0.440  Sum_probs=57.8

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ...+.-|..+|.|+. |+++..++.++|+..+     .+.+++.+.+++++.|.+.+|.+...||.+.+.
T Consensus       593 ~~~~~rf~~lD~~k~-~~~~i~~v~~vlk~~~-----~~~d~~~~~~~l~ea~~~~~g~v~l~e~~q~~s  656 (680)
T KOG0042|consen  593 LRRKTRFAFLDADKK-AYQAIADVLKVLKSEN-----VGWDEDRLHEELQEADENLNGFVELREFLQLMS  656 (680)
T ss_pred             HHHHHHHHhhcchHH-HHHHHHHHHHHHHHhc-----CCCCHHHHHHHHHHHHHhhcceeeHHHHHHHHH
Confidence            345567999999999 9999999999999988     789999999999999999999999999997663

>COG5411 Phosphatidylinositol 5-phosphate phosphatase [Signal transduction mechanisms]

Probab=91.85  E-value=0.37  Score=47.48  Aligned_cols=56  Identities=20%  Similarity=0.090  Sum_probs=35.2

Q ss_pred             CCCeEEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCc
Q 013259          166 LRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGS  223 (447)
Q Consensus       166 ~g~~l~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~  223 (447)
                      ....++++|.||.+..  .....|....+.+..-|.--....-.....++++||||..
T Consensus       163 ~~t~~cFv~shlaag~--~N~eeR~~Dy~~I~~~i~f~~g~~I~~hdti~w~GDlNyR  218 (460)
T COG5411         163 ERTSFCFVNSHLAAGV--NNIEERIFDYRSIASNICFSRGLRIYDHDTIFWLGDLNYR  218 (460)
T ss_pred             ecCCcEEEecchhccc--ccHHHHHHHHHHHHHheecCCCceecccceEEEecccCce
Confidence            4567999999998754  3456677777777665532100000123459999999953

>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin

Probab=91.54  E-value=0.76  Score=39.64  Aligned_cols=69  Identities=12%  Similarity=0.192  Sum_probs=56.7

Q ss_pred             hHHHHhhhhcCCCCCCcccHHHHHHHHHHhccC-----------------------------------------------
Q 013259          305 TETDAFAFLKADNDGDYITYSGFCEALEQLNLT-----------------------------------------------  337 (447)
Q Consensus       305 ~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~-----------------------------------------------  337 (447)
                      .|++-...||.|+| |.|..-|--..++.+|+.                                               
T Consensus         8 ~LQqHvaFFDrd~D-GiI~P~dTy~GFraLGf~~~~s~~aa~~I~~~lSy~T~~~w~p~P~f~Iyi~nIhk~kHGSDSg~   86 (174)
T PF05042_consen    8 VLQQHVAFFDRDKD-GIIYPWDTYQGFRALGFGILLSLLAAFIIHGALSYPTQPSWIPDPFFRIYIKNIHKGKHGSDSGA   86 (174)
T ss_pred             HHhhhhceeCCCCC-eeECHHHHHHHHHHhCCCHHHHHHHHHHHHcccCCccCCCCCCCCceeEEeecccccccCCCccc
Confidence            45566678999999 999999999999998876                                               


Q ss_pred             -CCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          338 -GHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       338 -~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                       +.--.+.++..++|+..+++.+.+.+++.|..+++..
T Consensus        87 YD~eGrFvp~kFe~iF~kya~~~~d~LT~~E~~~m~~~  124 (174)
T PF05042_consen   87 YDTEGRFVPQKFEEIFSKYAKTGPDALTLRELWRMLKG  124 (174)
T ss_pred             cccCCcCCHHHHHHHHHHhCCCCCCCcCHHHHHHHHHh
Confidence             1223477788999999999988899999999965533

Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.

>KOG1976 consensus Inositol polyphosphate 5-phosphatase, type I [Lipid transport and metabolism]

Probab=91.50  E-value=0.24  Score=46.15  Aligned_cols=71  Identities=21%  Similarity=0.256  Sum_probs=47.2

Q ss_pred             ccccCCCCCeEEEEEecccCC---------CCCCCchhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCCc-hh
Q 013259          160 QCRNGDLRQEILIVNTHLLFP---------HDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGH-VY  229 (447)
Q Consensus       160 ~~~~~~~g~~l~v~n~HL~~~---------~~~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~-~~  229 (447)
                      ..+....+..+.++|.||..-         +...++..|..++..+++.+..-.    .....++|.||||..-++. ..
T Consensus       161 ~~r~~I~~k~fdfVN~hLFhD~snla~~~sspt~ys~~R~~al~~vL~el~~~~----~~~~~~fVfGdfNfrLds~s~l  236 (391)
T KOG1976|consen  161 LARFRIHGKEFDFVNLHLFHDVSNLATKNSSPTKYSSKREQALEMVLKELDEEG----LRNDAIFVFGDFNFRLDSTSLL  236 (391)
T ss_pred             ceeEEEcCceeeeeehhhhcchhhhhhhcCChhhhhhhHHHHHHHHHHHHHhhc----cCceEEEEecccccccchHHHH
Confidence            456667789999999999331         012345668788888877665432    2556799999999976653 33


Q ss_pred             Hhhhh
Q 013259          230 KFLRS  234 (447)
Q Consensus       230 ~~l~~  234 (447)
                      ..|..
T Consensus       237 n~l~a  241 (391)
T KOG1976|consen  237 NYLAA  241 (391)
T ss_pred             HHHhc
Confidence            44433

>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]

Probab=90.79  E-value=0.25  Score=46.48  Aligned_cols=64  Identities=11%  Similarity=0.035  Sum_probs=52.7

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHH-hccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQ-LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ....|+-+|+.|+.+.| |.+...+|.-+|+. +|       +.+-.+-.++...+...+|+|.|.+|.+.+.
T Consensus       294 t~~iiq~afk~f~v~eD-g~~ge~~ls~ilq~~lg-------v~~l~v~~lf~~i~q~d~~ki~~~~f~~fa~  358 (412)
T KOG4666|consen  294 TPVIIQYAFKRFSVAED-GISGEHILSLILQVVLG-------VEVLRVPVLFPSIEQKDDPKIYASNFRKFAA  358 (412)
T ss_pred             cHHHHHHHHHhcccccc-cccchHHHHHHHHHhcC-------cceeeccccchhhhcccCcceeHHHHHHHHH
Confidence            44566778999999999 99999999999876 46       4555577789999999999999999987663

>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]

Probab=90.71  E-value=0.29  Score=46.10  Aligned_cols=97  Identities=11%  Similarity=0.126  Sum_probs=68.7

Q ss_pred             ccceeccCcchhhhhhhhhhhHHHHhHHHHHH-Hh---------h----hhhHHHHhhhhcCCCCCCcccHHHHH---HH
Q 013259          268 VDFIWLLNPNKYRKLLKASWSEAVFGMFKCLL-RR---------A----SLTETDAFAFLKADNDGDYITYSGFC---EA  330 (447)
Q Consensus       268 IDyI~~~~~~~~~~~~~~sw~~~v~~~~~~~~-~~---------~----~~~l~~~F~~~D~~~~~G~i~~~el~---~~  330 (447)
                      .|-.=++.-.+..++.++.+...+++.+...| ..         .    ...+.=-|..+|+|.+ +.|...|.+   .+
T Consensus       283 ~dp~kvR~l~gC~e~KKteFL~~Ll~aL~Tdmv~s~~~as~gr~~e~DeeRvv~w~F~qLdkN~n-n~i~rrEwKpFK~~  361 (421)
T KOG4578|consen  283 VDPKKVRRLNGCPEKKKTEFLTSLLDALKTDMVMSGINASNGRKSEPDEERVVHWYFNQLDKNSN-NDIERREWKPFKRV  361 (421)
T ss_pred             cccccccccCCCCcchhhHHHHHHHHHHhhhhhhhcccccCCcccCCChhheeeeeeeeeccccc-CccchhhcchHHHH
Confidence            45555666666667777777777777666555 11         0    1112224999999999 999999954   44


Q ss_pred             HHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          331 LEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       331 l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      |.+-.       -...-.+++++..|.|+|-+|+++|+..-|
T Consensus       362 l~k~s-------~~rkC~rk~~~yCDlNkDKkISl~Ew~~CL  396 (421)
T KOG4578|consen  362 LLKKS-------KPRKCSRKFFKYCDLNKDKKISLDEWRGCL  396 (421)
T ss_pred             HHhhc-------cHHHHhhhcchhcccCCCceecHHHHhhhh
Confidence            54422       455678899999999999999999998544

>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []

Probab=90.61  E-value=1.2  Score=38.23  Aligned_cols=63  Identities=10%  Similarity=0.275  Sum_probs=45.3

Q ss_pred             HHHhhhh---cCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          307 TDAFAFL---KADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       307 ~~~F~~~---D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      +++|..|   -..+. ..++..-|.++|+..||-+  ..++..+++-+|..+-..+..+|+|++|+..|
T Consensus         2 ~~~F~~f~~fG~~~~-~~m~~~~F~Kl~kD~~i~d--~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL   67 (154)
T PF05517_consen    2 EAVFKAFASFGKKNG-TEMDSKNFAKLCKDCGIID--KKLTSTDVDIIFSKVKAKGARKITFEQFLEAL   67 (154)
T ss_dssp             HHHHHHHHCSSTSTS-SEEEHHHHHHHHHHTSS----SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHH
T ss_pred             HHHHHHHHHhcCCcc-ccccHHHHHHHHHHcCCCC--CCCchHHHHHHHHHhhcCCCcccCHHHHHHHH
Confidence            4455444   34444 6899999999999876432  34899999999999866667789999999777

It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.

>KOG3866 consensus DNA-binding protein of the nucleobindin family [General function prediction only]

Probab=90.53  E-value=0.36  Score=45.09  Aligned_cols=65  Identities=12%  Similarity=0.226  Sum_probs=47.6

Q ss_pred             hHHHHhhhhcCCCCCCcccHHHHHHHHHH----hccCCCCCCCCHHHH-----------HHHHHHcCCCCCceeehHHHH
Q 013259          305 TETDAFAFLKADNDGDYITYSGFCEALEQ----LNLTGHKHGLADEET-----------KDLWVQADIDGNGVVDYKEFQ  369 (447)
Q Consensus       305 ~l~~~F~~~D~~~~~G~i~~~el~~~l~~----~g~~~~~~~~~~~~~-----------~~~~~~~D~~~~g~i~~~EF~  369 (447)
                      .-+..|...|.|+| |+++..||..++..    +-   . ..-.++++           +.+|+++|.|.|..|+.+||+
T Consensus       245 dPKTFF~LHD~NsD-GfldeqELEaLFtkELEKvY---d-pkNeeDDM~EmeEErlRMREHVMk~vDtNqDRlvtleEFL  319 (442)
T KOG3866|consen  245 DPKTFFALHDLNSD-GFLDEQELEALFTKELEKVY---D-PKNEEDDMKEMEEERLRMREHVMKQVDTNQDRLVTLEEFL  319 (442)
T ss_pred             CcchheeeeccCCc-ccccHHHHHHHHHHHHHHhc---C-CCCcchHHHHHHHHHHHHHHHHHHhcccchhhhhhHHHHH
Confidence            33557999999999 99999999888653    21   0 11222222           457899999999999999999


Q ss_pred             HHHhc
Q 013259          370 QRIWK  374 (447)
Q Consensus       370 ~~~~~  374 (447)
                      ..--+
T Consensus       320 ~~t~~  324 (442)
T KOG3866|consen  320 NDTDN  324 (442)
T ss_pred             hhhhh
Confidence            76533

>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13

Probab=90.50  E-value=0.67  Score=35.70  Aligned_cols=30  Identities=17%  Similarity=0.325  Sum_probs=27.6

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHh
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQL  334 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~  334 (447)
                      .++.++|+.+|.|+| |.|+.+||..++..+
T Consensus        47 ~~v~~mi~~~D~d~D-G~I~F~EF~~l~~~l   76 (89)
T cd05022          47 EGLEEKMKNLDVNQD-SKLSFEEFWELIGEL   76 (89)
T ss_pred             HHHHHHHHHhCCCCC-CCCcHHHHHHHHHHH
Confidence            689999999999999 999999999888765

S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu

>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=90.38  E-value=0.82  Score=47.99  Aligned_cols=49  Identities=22%  Similarity=0.388  Sum_probs=43.4

Q ss_pred             CCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          316 DNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       316 ~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      -+. |+|+-..-+.++-.-|       ++..-+-+|..-.|.|+||++|..||.-.|
T Consensus        27 p~~-gfitg~qArnfflqS~-------LP~~VLaqIWALsDldkDGrmdi~EfSIAm   75 (1118)
T KOG1029|consen   27 PGQ-GFITGDQARNFFLQSG-------LPTPVLAQIWALSDLDKDGRMDIREFSIAM   75 (1118)
T ss_pred             CCC-CccchHhhhhhHHhcC-------CChHHHHHHHHhhhcCccccchHHHHHHHH
Confidence            445 9999999999998877       788889999999999999999999998555

>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]

Probab=90.17  E-value=0.52  Score=46.83  Aligned_cols=60  Identities=22%  Similarity=0.371  Sum_probs=53.4

Q ss_pred             hHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          305 TETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       305 ~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      -+..-|+.+-.|-. |+|+-.--+.++.+-.       +.-+|+..|....|.|.||-++..||+..+
T Consensus       232 YYvnQFrtvQpDp~-gfisGsaAknFFtKSk-------lpi~ELshIWeLsD~d~DGALtL~EFcAAf  291 (737)
T KOG1955|consen  232 YYVNQFRTVQPDPH-GFISGSAAKNFFTKSK-------LPIEELSHIWELSDVDRDGALTLSEFCAAF  291 (737)
T ss_pred             HHHhhhhcccCCcc-cccccHHHHhhhhhcc-------CchHHHHHHHhhcccCccccccHHHHHhhH
Confidence            34556888889999 9999999999998854       888999999999999999999999999777

>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]

Probab=89.68  E-value=0.33  Score=46.05  Aligned_cols=60  Identities=17%  Similarity=0.129  Sum_probs=49.9

Q ss_pred             hHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          305 TETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       305 ~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ++.=+|..+|.|.| |.|+..||+.+-  ++       -.+.-|+.+|...|...||.|+-+|+..-.+.
T Consensus       251 s~gWMFnklD~N~D-l~Ld~sEl~~I~--ld-------knE~CikpFfnsCD~~kDg~iS~~EWC~CF~k  310 (434)
T KOG3555|consen  251 SLGWMFNKLDTNYD-LLLDQSELRAIE--LD-------KNEACIKPFFNSCDTYKDGSISTNEWCYCFQK  310 (434)
T ss_pred             hhhhhhhccccccc-cccCHHHhhhhh--cc-------CchhHHHHHHhhhcccccCccccchhhhhhcc
Confidence            44557999999999 999999998763  22       45778999999999999999999999954443

>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z

Probab=88.99  E-value=0.5  Score=36.71  Aligned_cols=33  Identities=12%  Similarity=0.277  Sum_probs=28.8

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLN  335 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g  335 (447)
                      ....+.++++.+|.|++ |.|+.+||..++..+.
T Consensus        51 ~~~~v~~i~~elD~n~d-G~Idf~EF~~l~~~l~   83 (93)
T cd05026          51 DPMLVDKIMNDLDSNKD-NEVDFNEFVVLVAALT   83 (93)
T ss_pred             CHHHHHHHHHHhCCCCC-CCCCHHHHHHHHHHHH
Confidence            34579999999999999 9999999999987763

S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac

>PLN03191 Type I inositol-1,4,5-trisphosphate 5-phosphatase 2; Provisional

Probab=88.92  E-value=0.35  Score=49.97  Aligned_cols=58  Identities=22%  Similarity=0.231  Sum_probs=34.3

Q ss_pred             CCeEEEEEecccCCCCCCCchhhHHHHHHHHHHHH--HHHHHc----CCCCCcEEEeecCCCcc
Q 013259          167 RQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVE--SYQKEH----NLKPIPIILCGDWNGSK  224 (447)
Q Consensus       167 g~~l~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~--~~~~~~----~~~~~pvIl~GDFN~~p  224 (447)
                      +..|+++|+||.++........|..+...|+..+.  ......    -.....+|++||||---
T Consensus       419 ~Ts~cFVn~HLAAg~~~~~~~rRN~D~~~I~~~l~F~~~~~~~~~~~I~dhD~vFWlGDLNYRI  482 (621)
T PLN03191        419 QSRLCFVCSHLTSGHKDGAEQRRNADVYEIIRRTRFSSVLDTDQPQTIPSHDQIFWFGDLNYRL  482 (621)
T ss_pred             CcEEEEEEeccccccccchHHHHHHHHHHHHhccccCcccccCCCccccccceEEEecCccccc
Confidence            46799999999876543334456666666654321  000000    01234699999999743

>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP)

Probab=88.44  E-value=0.45  Score=38.62  Aligned_cols=29  Identities=17%  Similarity=0.232  Sum_probs=25.3

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHH
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALE  332 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~  332 (447)
                      ...+..+|..+|.|+| |+||.+|++.++.
T Consensus        79 e~~~~~f~~~~D~n~D-g~IS~~Ef~~cl~  107 (116)
T cd00252          79 EHCIKPFFESCDLDKD-GSISLDEWCYCFI  107 (116)
T ss_pred             HHHHHHHHHHHCCCCC-CCCCHHHHHHHHh
Confidence            3456779999999999 9999999999983

SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.

>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12

Probab=88.28  E-value=1.2  Score=34.07  Aligned_cols=32  Identities=13%  Similarity=0.244  Sum_probs=28.4

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhc
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLN  335 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g  335 (447)
                      ...+..+|+.+|.|++ |.|+.+||..++..+.
T Consensus        50 ~~~v~~i~~~~D~d~d-G~I~f~eF~~~~~~~~   81 (88)
T cd05030          50 QKAIDKIFEDLDTNQD-GQLSFEEFLVLVIKVG   81 (88)
T ss_pred             HHHHHHHHHHcCCCCC-CcCcHHHHHHHHHHHH
Confidence            5678999999999999 9999999999887653

Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.

>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11

Probab=88.00  E-value=1.2  Score=34.35  Aligned_cols=32  Identities=13%  Similarity=0.177  Sum_probs=28.1

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhc
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLN  335 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g  335 (447)
                      ...+.++++.+|.|+| |.|+.+||..++..+.
T Consensus        51 ~~~~~~ll~~~D~d~D-G~I~f~EF~~l~~~l~   82 (89)
T cd05023          51 PGVLDRMMKKLDLNSD-GQLDFQEFLNLIGGLA   82 (89)
T ss_pred             HHHHHHHHHHcCCCCC-CcCcHHHHHHHHHHHH
Confidence            3578899999999999 9999999999887653

S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S

>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]

Probab=87.34  E-value=0.94  Score=42.81  Aligned_cols=63  Identities=8%  Similarity=0.081  Sum_probs=53.3

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHh-ccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQL-NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~-g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ..++..|..||.+++ |.++..|--..+.-+ |     ...+.+.++--++.|+.+.||.+.-.+|.-.+
T Consensus       259 d~l~~~f~LFde~~t-g~~D~re~v~~lavlc~-----p~~t~~iiq~afk~f~v~eDg~~ge~~ls~il  322 (412)
T KOG4666|consen  259 DKLAPTFMLFDEGTT-GNGDYRETVKTLAVLCG-----PPVTPVIIQYAFKRFSVAEDGISGEHILSLIL  322 (412)
T ss_pred             hhhhhhhheecCCCC-CcccHHHHhhhheeeeC-----CCCcHHHHHHHHHhcccccccccchHHHHHHH
Confidence            567889999999999 999988877766554 5     77888999999999999999999999887333

>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]

Probab=87.14  E-value=1.2  Score=44.22  Aligned_cols=66  Identities=11%  Similarity=0.176  Sum_probs=50.6

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHH-------hccCCCCCCCC-HHHHHHHHHHcCCCCCceeehHHHHH
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQ-------LNLTGHKHGLA-DEETKDLWVQADIDGNGVVDYKEFQQ  370 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~-------~g~~~~~~~~~-~~~~~~~~~~~D~~~~g~i~~~EF~~  370 (447)
                      +.....+.=+|+.+|.+++ |.|+..||+-+.+.       +|.    +.+. ++-+.+|+.++-....++|+..+|..
T Consensus       347 k~t~~SleYwFrclDld~~-G~Lt~~el~~fyeeq~~rm~~~~~----e~l~fed~l~qi~DMvkP~~~~kItLqDlk~  420 (493)
T KOG2562|consen  347 KDTPASLEYWFRCLDLDGD-GILTLNELRYFYEEQLQRMECMGQ----EALPFEDALCQIRDMVKPEDENKITLQDLKG  420 (493)
T ss_pred             CCCccchhhheeeeeccCC-CcccHHHHHHHHHHHHHHHHhcCC----CcccHHHHHHHHHHHhCccCCCceeHHHHhh
Confidence            5666788889999999999 99999999766432       341    2222 55567788888877789999999974

>KOG4251 consensus Calcium binding protein [General function prediction only]

Probab=86.65  E-value=1.1  Score=40.57  Aligned_cols=61  Identities=18%  Similarity=0.328  Sum_probs=51.3

Q ss_pred             HHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       308 ~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      +.=..+|.|.| |.++..||...+.-+.     ..+.-.++..+|..-|.+++.+++.+|.++.-|-
T Consensus       285 EFeElIDsNhD-GivTaeELe~y~dP~n-----~~~alne~~~~ma~~d~n~~~~Ls~eell~r~~~  345 (362)
T KOG4251|consen  285 EFEELIDSNHD-GIVTAEELEDYVDPQN-----FRLALNEVNDIMALTDANNDEKLSLEELLERDWL  345 (362)
T ss_pred             HHHHHhhcCCc-cceeHHHHHhhcCchh-----hhhhHHHHHHHHhhhccCCCcccCHHHHHHHHhh
Confidence            33357899999 9999999999876666     5577788999999999999999999999876654

>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6

Probab=86.62  E-value=0.86  Score=34.99  Aligned_cols=33  Identities=12%  Similarity=0.210  Sum_probs=28.7

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLN  335 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g  335 (447)
                      ...++.++|+.+|.|++ |.|+.+||-..+..+.
T Consensus        49 t~~ev~~m~~~~D~d~d-G~Idf~EFv~lm~~l~   81 (88)
T cd05029          49 QDAEIAKLMEDLDRNKD-QEVNFQEYVTFLGALA   81 (88)
T ss_pred             CHHHHHHHHHHhcCCCC-CCCcHHHHHHHHHHHH
Confidence            55688999999999999 9999999988887653

S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact

>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10

Probab=85.89  E-value=0.52  Score=36.61  Aligned_cols=33  Identities=12%  Similarity=0.277  Sum_probs=29.6

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLN  335 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g  335 (447)
                      ....+..+|+.+|.|++ |.|+.+||..++..++
T Consensus        49 s~~ei~~~~~~~D~~~d-g~I~f~eF~~l~~~~~   81 (94)
T cd05031          49 DPMAVDKIMKDLDQNRD-GKVNFEEFVSLVAGLS   81 (94)
T ss_pred             cHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHHH
Confidence            44678899999999999 9999999999998877

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A

Probab=85.89  E-value=1.1  Score=30.22  Aligned_cols=30  Identities=13%  Similarity=0.073  Sum_probs=24.8

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHh
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQL  334 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~  334 (447)
                      .-...+|+..|+.++ |.+..+|+.++.+.+
T Consensus        21 ~yA~~LFq~~D~s~~-g~Le~~Ef~~Fy~~L   50 (51)
T PF14788_consen   21 EYARQLFQECDKSQS-GRLEGEEFEEFYKRL   50 (51)
T ss_dssp             HHHHHHHHHH-SSSS-SEBEHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcccCC-CCccHHHHHHHHHHh
Confidence            345669999999999 999999999988764

...

>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10

Probab=85.63  E-value=1.3  Score=34.11  Aligned_cols=33  Identities=12%  Similarity=0.181  Sum_probs=28.7

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLN  335 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g  335 (447)
                      ....+.++|+.+|.|+| |.|+..|+-.++..+.
T Consensus        46 d~~~vd~im~~LD~n~D-g~vdF~EF~~Lv~~l~   78 (91)
T cd05024          46 DPMAVDKIMKDLDDCRD-GKVGFQSFFSLIAGLL   78 (91)
T ss_pred             CHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHHH
Confidence            45679999999999999 9999999998876653

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>smart00027 EH Eps15 homology domain

Probab=85.01  E-value=1.2  Score=34.63  Aligned_cols=29  Identities=14%  Similarity=0.232  Sum_probs=24.4

Q ss_pred             HHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          346 EETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       346 ~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      .++..+|..+|.|++|.|+++|+...+..
T Consensus        10 ~~l~~~F~~~D~d~~G~Is~~el~~~l~~   38 (96)
T smart00027       10 AKYEQIFRSLDKNQDGTVTGAQAKPILLK   38 (96)
T ss_pred             HHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            34677899999999999999999976643

Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.

>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional

Probab=84.78  E-value=1  Score=44.78  Aligned_cols=51  Identities=14%  Similarity=0.145  Sum_probs=39.4

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhccCcccccccCCCcccccccc
Q 013259          341 HGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTTWSDQRNDLNDEDEDGFVK  394 (447)
Q Consensus       341 ~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (447)
                      ....+.++..+|+.+|.|+||.|+++||+.   ...++...|.+..|.++.+|.
T Consensus       329 ~~~~~~~l~~aF~~~D~dgdG~Is~~E~~~---~~~~F~~~D~d~DG~Is~eEf  379 (391)
T PRK12309        329 GEAFTHAAQEIFRLYDLDGDGFITREEWLG---SDAVFDALDLNHDGKITPEEM  379 (391)
T ss_pred             cChhhHHHHHHHHHhCCCCCCcCcHHHHHH---HHHHHHHhCCCCCCCCcHHHH
Confidence            556778899999999999999999999973   233456666677777766654

>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1

Probab=84.56  E-value=2.6  Score=32.46  Aligned_cols=33  Identities=12%  Similarity=0.197  Sum_probs=28.7

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLN  335 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g  335 (447)
                      ....+.++|+.+|.|++ |.|+.+||..++..+.
T Consensus        50 s~~~v~~i~~~~D~d~~-G~I~f~eF~~l~~~~~   82 (92)
T cd05025          50 DADAVDKIMKELDENGD-GEVDFQEFVVLVAALT   82 (92)
T ss_pred             CHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHHH
Confidence            44678999999999999 9999999999887653

S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.

>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]

Probab=83.60  E-value=1.4  Score=43.71  Aligned_cols=60  Identities=23%  Similarity=0.308  Sum_probs=45.6

Q ss_pred             HHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHc----CCCCCceeehHHHHHHHhc
Q 013259          306 ETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQA----DIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       306 l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~----D~~~~g~i~~~EF~~~~~~  374 (447)
                      +..-|-.+|+|+| |.|+.++|+..-.        .-++.--++.+|.++    -.-.+|+++|++|+-.+..
T Consensus       280 iy~kFweLD~Dhd-~lidk~~L~ry~d--------~tlt~~ivdRIFs~v~r~~~~~~eGrmdykdFv~FilA  343 (493)
T KOG2562|consen  280 IYCKFWELDTDHD-GLIDKEDLKRYGD--------HTLTERIVDRIFSQVPRGFTVKVEGRMDYKDFVDFILA  343 (493)
T ss_pred             HHHHHhhhccccc-cccCHHHHHHHhc--------cchhhHHHHHHHhhccccceeeecCcccHHHHHHHHHH
Confidence            3334889999999 9999999987633        336677788999843    3446899999999976643

>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

Probab=83.20  E-value=1.9  Score=29.39  Aligned_cols=31  Identities=16%  Similarity=0.216  Sum_probs=25.7

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHH
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCEAL  331 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l  331 (447)
                      ......+..+|..+|.+++ |.|+.+||..++
T Consensus        32 ~~~~~~~~~~~~~~~~~~~-~~l~~~ef~~~~   62 (63)
T cd00051          32 GLSEEEIDEMIREVDKDGD-GKIDFEEFLELM   62 (63)
T ss_pred             CCCHHHHHHHHHHhCCCCC-CeEeHHHHHHHh
Confidence            3445567789999999999 999999998765

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.

>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B

Probab=82.65  E-value=2.7  Score=32.24  Aligned_cols=32  Identities=13%  Similarity=0.190  Sum_probs=27.8

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL  334 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~  334 (447)
                      ...++.++++.+|.|++ |.|+.+||..++..+
T Consensus        49 ~~~~v~~~i~~~D~n~d-G~v~f~eF~~li~~~   80 (88)
T cd05027          49 EQEVVDKVMETLDSDGD-GECDFQEFMAFVAMV   80 (88)
T ss_pred             CHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHH
Confidence            44568999999999999 999999998887654

S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i

>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction

Probab=81.82  E-value=1.9  Score=30.51  Aligned_cols=32  Identities=13%  Similarity=0.221  Sum_probs=27.4

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL  334 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~  334 (447)
                      ....+.++|+.+|.+++ |.|+.+|+..++..+
T Consensus        31 ~~~~~~~i~~~~d~~~~-g~i~~~ef~~~~~~~   62 (67)
T cd00052          31 PRSVLAQIWDLADTDKD-GKLDKEEFAIAMHLI   62 (67)
T ss_pred             CHHHHHHHHHHhcCCCC-CcCCHHHHHHHHHHH
Confidence            34568889999999999 999999999887654

The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.

>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]

Probab=81.65  E-value=2.1  Score=45.24  Aligned_cols=66  Identities=18%  Similarity=0.293  Sum_probs=58.1

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ....-+..+|+..|++++ |.++..+...++..+.     ..+.+..+..++++.|..+++++...+|++.-
T Consensus       133 ~~~~wi~~~~~~ad~~~~-~~~~~~~~~~~~~~~n-----~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~  198 (746)
T KOG0169|consen  133 RREHWIHSIFQEADKNKN-GHMSFDEVLDLLKQLN-----VQLSESKARRLFKESDNSQTGKLEEEEFVKFR  198 (746)
T ss_pred             hHHHHHHHHHHHHccccc-cccchhhHHHHHHHHH-----HhhhHHHHHHHHHHHHhhccceehHHHHHHHH
Confidence            344567788999999999 9999999999999988     66889999999999999999999999998644

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	447
4b8c_D	727	Nuclease Module Of The Yeast Ccr4-Not Complex Lengt		6e-05

>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex Length = 727

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 97/235 (41%), Gaps = 41/235 (17%)
Query: 61  WFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLART------- 113
           W  R  ++ + +L   S ++CLQE  V ++   + +   L   GY     A+        
Sbjct: 423 WDYRRNKLKEQILSYDSDLLCLQE--VESKTFEEYWVPLLDKHGYTGIFHAKARAKTMHS 480
Query: 114 --NNRGDGLLTAVHKDYFRVVNYRDLLFN-------------DFGDRVAQLLHVELIDPF 158
             + + DG      +D F+++    + F+             D+ +R     +V L    
Sbjct: 481 KDSKKVDGCCIFFKRDQFKLITKDAMDFSGAWMKHKKFQRTEDYLNRAMNKDNVALFLKL 540
Query: 159 SQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKE---HN----LKP 211
               +GD    I  V THL +  D   + V+  QV  +L H+E+  KE   HN    +K 
Sbjct: 541 QHIPSGD---TIWAVTTHLHW--DPKFNDVKTFQVGVLLDHLETLLKEETSHNFRQDIKK 595
Query: 212 IPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRNHRGNIC 266
            P+++CGD+N      VY+ + + G V      HQ  +     ++S +N   N+ 
Sbjct: 596 FPVLICGDFNSYINSAVYELINT-GRVQ----IHQEGNGRDFGYMSEKNFSHNLA 645

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	447
3ngq_A	398	CCR4-NOT transcription complex subunit 6-like; alp	2e-25
3mpr_A	298	Putative endonuclease/exonuclease/phosphatase FAM	6e-17
3g6s_A	267	Putative endonuclease/exonuclease/phosphatase fami	2e-14
3l1w_A	257	Uncharacterized protein; APC29019.2, conserved pro	5e-11
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	3e-10
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	3e-10
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	8e-10
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	3e-09
3i41_A	317	Beta-hemolysin; beta toxin, sphingomyelinase, toxi	4e-09
1wlz_A	105	DJBP, CAP-binding protein complex interacting prot	8e-09
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	9e-09
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	1e-08
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	2e-08
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	4e-08
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	7e-08
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	1e-07
3li6_A	66	Calcium-binding protein; calcium signaling protein	1e-07
2ddr_A	306	Sphingomyelin phosphodiesterase; DNAse I like fold	1e-07
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	1e-07
1zwx_A	301	SMCL, sphingomyelinase-C; dnase1-like fold, beta-h	2e-07
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	2e-07
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	4e-04
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	3e-07
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	4e-07
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	5e-07
3cs1_A	219	Flagellar calcium-binding protein; myristoylated,	5e-07
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	6e-07
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	8e-07
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	5e-05
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	8e-07
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	8e-05
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	1e-06
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	8e-06
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	1e-06
1c7v_A	81	CAVP, calcium vector protein; EF-hand family, calc	1e-06
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	1e-06
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	2e-06
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	2e-06
2b1u_A	71	Calmodulin-like protein 5; CLSP, calmodulin-like S	2e-06
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	2e-06
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	4e-04
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	2e-06
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	2e-05
2d58_A	107	Allograft inflammatory factor 1; EF-hand, metal bi	3e-06
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	3e-06
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	3e-06
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	3e-06
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	2e-05
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	3e-06
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	4e-06
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	9e-05
3teb_A	266	Endonuclease/exonuclease/phosphatase; PSI-biology,	5e-06
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	5e-06
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	5e-06
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	8e-04
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	5e-06
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	5e-05
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	6e-06
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	4e-05
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	6e-06
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	6e-06
1yx7_A	83	Calsensin, LAN3-6 antigen; calcium-binding protein	8e-06
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	8e-06
2jnf_A	158	Troponin C; stretch activated muscle contraction,	8e-06
2jnf_A	158	Troponin C; stretch activated muscle contraction,	3e-05
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	1e-05
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	2e-05
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	7e-05
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	1e-05
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	9e-04
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	1e-05
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	1e-05
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	1e-05
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	1e-05
2hps_A	186	Coelenterazine-binding protein with bound coelent;	1e-05
2hps_A	186	Coelenterazine-binding protein with bound coelent;	2e-05
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	1e-05
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	1e-05
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	2e-05
2l4h_A	214	Calcium and integrin-binding protein 1; metal bind	1e-05
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	1e-05
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	2e-05
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	2e-05
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	2e-05
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	6e-05
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	2e-05
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	2e-05
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	2e-05
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	2e-05
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	6e-05
1k9u_A	78	Polcalcin PHL P 7; pollen allergen, calcium-bindin	2e-05
1qx2_A	76	Vitamin D-dependent calcium-binding protein, INTE;	2e-05
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	2e-05
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	9e-04
3fwb_A	161	Cell division control protein 31; gene gating, com	2e-05
3fwb_A	161	Cell division control protein 31; gene gating, com	3e-05
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	3e-05
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	5e-04
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	3e-05
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	3e-05
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	7e-04
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	8e-04
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	3e-05
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	3e-05
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	5e-05
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	8e-05
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	6e-05
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	6e-05
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	8e-05
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	1e-04
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	1e-04
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	1e-04
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	8e-04
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	1e-04
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	2e-04
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	2e-04
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	2e-04
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	3e-04
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	4e-04
1y1x_A	191	Leishmania major homolog of programmed cell death	5e-04
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	9e-04
1iq3_A	110	Ralbp1-interacting protein (partner of ralbp1); EF	9e-04

>3ngq_A CCR4-NOT transcription complex subunit 6-like; alpha/beta sandwich fold, hydrolase; HET: 1PS; 1.80A {Homo sapiens} PDB: 3ngo_A 3ngn_A Length = 398

 Score =  106 bits (265), Expect = 2e-25
 Identities = 52/310 (16%), Positives = 104/310 (33%), Gaps = 48/310 (15%)

Query: 25  QQQPCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQE 84
                 T   +N+L   Y         C        W  R + I++ ++   + II LQE
Sbjct: 27  LPSASFTVMCYNVLCDKYATRQLYG-YCPSWALN--WEYRKKGIMEEIVNCDADIISLQE 83

Query: 85  FWVGNEELVDMYEKRLSDAGYVNFKLART---------NNRGDGLLTAVHKDYFRVVNYR 135
             V  E+   ++   L + GY  F   ++             DG       + F +V   
Sbjct: 84  --VETEQYFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKH 141

Query: 136 DLLFNDFGDR---------------------VAQLLHVELIDPFSQCRNGDLRQEILIVN 174
            + FN                          V   +H EL     +  +   +Q +++ N
Sbjct: 142 TVEFNQVAMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGAGMKPIHAADKQLLIVAN 201

Query: 175 THLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKP---------IPIILCGDWNGSKR 225
            H+ +  D   S V+L Q    +  V++  ++ + +P         IP++LC D N    
Sbjct: 202 AHMHW--DPEYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPD 259

Query: 226 GHVYKFLRSQGFVSSYD--TAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLL 283
             V ++L + G   ++      +Y +   +   + +N            L +  +   + 
Sbjct: 260 SGVVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMP 319

Query: 284 KASWSEAVFG 293
             +++    G
Sbjct: 320 YTNYTFDFKG 329

>3mpr_A Putative endonuclease/exonuclease/phosphatase FAM protein; structural genomics, PSI-2, protein structure initiative; HET: MSE PEG; 1.90A {Bacteroides thetaiotaomicron} Length = 298

 Score = 80.1 bits (197), Expect = 6e-17
 Identities = 42/244 (17%), Positives = 78/244 (31%), Gaps = 28/244 (11%)

Query: 34  TFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELV 93
           ++N+        +  D           W  R   I   + Y    I   QE        +
Sbjct: 11  SYNLRNANGSDSARGDG----------WGQRYPVIAQMVQYHDFDIFGTQE---CFLHQL 57

Query: 94  DMYEKRLSDAGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVE 153
              ++ L    Y+        ++G+        D F +V   D   ++  D  ++     
Sbjct: 58  KDMKEALPGYDYIGVGRDDGKDKGEHSAIFYRTDKFDIVEKGDFWLSETPDVPSKGWDAV 117

Query: 154 L--IDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKP 211
           L  I  +   +  D   E L  N H+    D      R+   + + + ++   +  NL  
Sbjct: 118 LPRICSWGHFKCKDTGFEFLFFNLHM----DHIGKKARVESAFLVQEKMKELGRGKNL-- 171

Query: 212 IPIILCGDWNGSKRGHVYKFLRSQG-FVSSYDTAHQYTDADA--HKWVSHRNHRGNICGV 268
            P IL GD+N  +    Y    S+G    SY+        +   + +  +      I   
Sbjct: 172 -PAILTGDFNVDQTHQSYDAFVSKGVLCDSYEKCDYRYALNGTFNNFDPNSFTESRI--- 227

Query: 269 DFIW 272
           D I+
Sbjct: 228 DHIF 231

>3g6s_A Putative endonuclease/exonuclease/phosphatase family protein; alpha-beta protein, structural genomics, PSI-2; 2.50A {Bacteroides vulgatus atcc 8482} Length = 267

 Score = 72.3 bits (177), Expect = 2e-14
 Identities = 40/246 (16%), Positives = 75/246 (30%), Gaps = 33/246 (13%)

Query: 34  TFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELV 93
           TFNI                  D    W  R  R+  ++      I+ +QE         
Sbjct: 8   TFNIR------------YDNPQDSLNNWQYRKDRVCQFIKDHELDIVGMQEVLHNQ---F 52

Query: 94  DMYEKRLSDAGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVE 153
                 L +   +          G+       KD + V++       +  D V  +    
Sbjct: 53  QDLRAGLPEYDGIGVGRDDGKTAGEYAPLFYRKDKYEVLDSNTFWLAENPDSVGMMGWDA 112

Query: 154 LIDPFSQC---RNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLK 210
           +    +     ++    +  + VNTH     D      R      I++ ++    E    
Sbjct: 113 VCVRIATWAKFKDKATGKIFMAVNTHF----DHVGEEARRQSALLIIRKIKEIVGER--- 165

Query: 211 PIPIILCGDWNGSKRGHVYKFLRSQG--FVSSYDTAHQYTDADA--HKWVSHRNHRGNIC 266
             P ++ GD+N +     Y+ + +       +Y TA + T  D   H +           
Sbjct: 166 --PAVVTGDFNVTDASDAYETITTNEFVMKDAYKTAARVTGVDYTFHDFARIPAEDCEK- 222

Query: 267 GVDFIW 272
            +DFI+
Sbjct: 223 -IDFIF 227

>3l1w_A Uncharacterized protein; APC29019.2, conserved protein, enterococcus faecalis V583, PSI-2, MCSG, structural genomics; 1.60A {Enterococcus faecalis} Length = 257

 Score = 61.9 bits (150), Expect = 5e-11
 Identities = 39/244 (15%), Positives = 85/244 (34%), Gaps = 35/244 (14%)

Query: 34  TFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELV 93
           T+N+            +   E D    W  R + +   + +   S+ C+QE  V   ++ 
Sbjct: 5   TYNV------------RVDTEYDQDWQWSFRKEAVCQLINFHDWSLCCIQE--VRPNQVR 50

Query: 94  DMYEKRLSDAGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVE 153
           D+  K  +    ++ +    + +G+GL    ++   + ++      ++   + +      
Sbjct: 51  DL--KAYTTFTCLSAE-REGDGQGEGLAILYNEQKVQAIDTGYFWLSETPQQPSIHPEAG 107

Query: 154 LIDPFSQC--RNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKP 211
                     +        L++N HL    D   +  RL  +  IL+ +     ++    
Sbjct: 108 CPRIALWGLFKETTQNTPFLVINVHL----DHISAHARLAGMTVILEELHDKIAQY---- 159

Query: 212 IPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDA---DAHKWVSHRNHRGNICGV 268
            P +L GD+N      V++ L  + F  S + A  Y          +         I   
Sbjct: 160 -PTLLMGDFNAESGEEVHQ-LVQKKFQDSKNLATHYGPRGTFQNFTYTKPWAELEEI--- 214

Query: 269 DFIW 272
           D+I+
Sbjct: 215 DYIY 218

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A Length = 109

 Score = 56.5 bits (137), Expect = 3e-10
 Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 3/61 (4%)

Query: 311 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 369
            F   D D   +I        L+  +       L+ +ETK L    D DG+G +  +EF 
Sbjct: 46  VFHILDKDKSGFIEEDELGSILKGFSSDARD--LSAKETKTLMAAGDKDGDGKIGVEEFS 103

Query: 370 Q 370
            
Sbjct: 104 T 104

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A Length = 108

 Score = 56.1 bits (136), Expect = 3e-10
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 3/63 (4%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
           D F F+  D  G Y+        L++      +  L + ETK L   AD DG+G +   E
Sbjct: 45  DIFRFIDNDQSG-YLDGDELKYFLQKFQSDARE--LTESETKSLMDAADNDGDGKIGADE 101

Query: 368 FQQ 370
           FQ+
Sbjct: 102 FQE 104

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A Length = 108

 Score = 55.0 bits (133), Expect = 8e-10
 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 3/63 (4%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
           + F  L  D  G +I        L++         L   ETK     AD DG+G +  +E
Sbjct: 45  EIFRILDNDQSG-FIEEDELKYFLQRFESGARV--LTASETKTFLAAADHDGDGKIGAEE 101

Query: 368 FQQ 370
           FQ+
Sbjct: 102 FQE 104

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A Length = 110

 Score = 53.3 bits (129), Expect = 3e-09
 Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 6/82 (7%)

Query: 292 FGMFKCLLRRASLTETD---AFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEET 348
              F  L+   +++  D    F  + AD  G +I        L+     G    L D ET
Sbjct: 27  HKKFFALVGLKAMSANDVKKVFKAIDADASG-FIEEEELKFVLKSFAADGRD--LTDAET 83

Query: 349 KDLWVQADIDGNGVVDYKEFQQ 370
           K     AD DG+G +   EF+ 
Sbjct: 84  KAFLKAADKDGDGKIGIDEFET 105

>3i41_A Beta-hemolysin; beta toxin, sphingomyelinase, toxin; 1.75A {Staphylococcus aureus} PDB: 3i46_A 3i48_A 3i5v_A* 3k55_A Length = 317

 Score = 57.0 bits (137), Expect = 4e-09
 Identities = 30/265 (11%), Positives = 68/265 (25%), Gaps = 43/265 (16%)

Query: 34  TFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELV 93
           + N+         N  Q             R   I      + + ++   E +  +    
Sbjct: 34  SHNVYMLSTVLYPNWGQY-----------KRADLIGQSSYIKNNDVVIFNEAF--DNGAS 80

Query: 94  DMYEKRLSDAGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVE 153
           D     +    Y         ++     T          +    + + +      +    
Sbjct: 81  DKLLSNVKK-EYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVAIVSKY-----PIKEKI 134

Query: 154 LIDPFSQCRNGDLR--------------QEILIVNTHLLFPH----DSSLSLVRLHQVYK 195
               F      D                + + ++ TH               +R  Q+ +
Sbjct: 135 QH-VFKSGCGFDNDSNKGFVYTKIEKNGKNVHVIGTHTQSEDSRCGAGHDRKIRAEQMKE 193

Query: 196 ILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYK-FLRSQGFVSSYDTAHQYT-DADAH 253
           I   V+      +     + + GD N +K    +K  L++          H  T D  ++
Sbjct: 194 ISDFVKKKNIPKD---ETVYIGGDLNVNKGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSN 250

Query: 254 KWVSHRNHRGNICGVDFIWLLNPNK 278
               +    G    +D+I+    +K
Sbjct: 251 SIAKYNYPNGKPEHLDYIFTDKDHK 275

>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 Length = 105

 Score = 52.1 bits (125), Expect = 8e-09
 Identities = 12/59 (20%), Positives = 20/59 (33%), Gaps = 6/59 (10%)

Query: 311 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 368
            F   D      I+   F     +         L DE+   LW +  ++  G + Y +F
Sbjct: 29  EFENFDTMKTNTISREEFRAICNRRVQI-----LTDEQFDRLWNEMPVNAKGRLKYPDF 82

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A Length = 108

 Score = 51.8 bits (125), Expect = 9e-09
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 3/63 (4%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
            AF  +  D  G +I        L+  + +     L D ETK      D DG+G++   E
Sbjct: 45  KAFYVIDQDKSG-FIEEDELKLFLQNFSPSARA--LTDAETKAFLADGDKDGDGMIGVDE 101

Query: 368 FQQ 370
           F  
Sbjct: 102 FAA 104

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 Length = 109

 Score = 51.4 bits (124), Expect = 1e-08
 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 3/63 (4%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
           + F  L  D  G +I        L+  +  G    L D ETK L    D D +G +   E
Sbjct: 45  EVFEILDKDQSG-FIEEEELKGVLKGFSAHGRD--LNDTETKALLAAGDSDHDGKIGADE 101

Query: 368 FQQ 370
           F +
Sbjct: 102 FAK 104

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 Length = 109

 Score = 51.5 bits (124), Expect = 2e-08
 Identities = 16/61 (26%), Positives = 22/61 (36%), Gaps = 3/61 (4%)

Query: 311 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 369
           AF   D D   +I        L+  +       L D ETK      D DG+G +   E+ 
Sbjct: 47  AFFVIDQDKSGFIEEDELKLFLQVFSAGARA--LTDAETKAFLKAGDSDGDGAIGVDEWA 104

Query: 370 Q 370
            
Sbjct: 105 A 105

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 87

 Score = 49.4 bits (119), Expect = 4e-08
 Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 6/61 (9%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
           + F  +  DN G  IT+    + L+++   G +  L + E KDL   ADID +G +DY E
Sbjct: 27  ELFKMIDTDNSG-TITFDELKDGLKRV---GSE--LMESEIKDLMDAADIDKSGTIDYGE 80

Query: 368 F 368
           F
Sbjct: 81  F 81

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} PDB: 2kqy_A Length = 109

 Score = 49.6 bits (119), Expect = 7e-08
 Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 3/63 (4%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
             F  L  D  G +I        L+  + +     L   ETK      D DG+G +  +E
Sbjct: 46  KVFGILDQDKSG-FIEEEELQLFLKNFSSSAR--VLTSAETKAFLAAGDTDGDGKIGVEE 102

Query: 368 FQQ 370
           FQ 
Sbjct: 103 FQS 105

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} Length = 91

 Score = 48.5 bits (116), Expect = 1e-07
 Identities = 9/59 (15%), Positives = 22/59 (37%), Gaps = 8/59 (13%)

Query: 311 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 368
            F   D +    +    F     +L +          + + ++ + D D +G + ++EF
Sbjct: 32  VFAACDANRSGRLEREEFRALCTELRVR-------PADAEAVFQRLDADRDGAITFQEF 83

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66

 Score = 47.6 bits (114), Expect = 1e-07
 Identities = 13/61 (21%), Positives = 26/61 (42%), Gaps = 6/61 (9%)

Query: 311 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 369
            F + D +GD  ++Y      + +           ++  + ++   D DGNG +D  EF 
Sbjct: 5   LFKEIDVNGDGAVSYEEVKAFVSKKR-----AIKNEQLLQLIFKSIDADGNGEIDQNEFA 59

Query: 370 Q 370
           +
Sbjct: 60  K 60

>2ddr_A Sphingomyelin phosphodiesterase; DNAse I like folding, riken structural genomics/proteomics initiative, RSGI, structural genomics, hydrolase; 1.40A {Bacillus cereus} SCOP: d.151.1.3 PDB: 2dds_A 2ddt_A* 2uyr_X Length = 306

 Score = 52.0 bits (124), Expect = 1e-07
 Identities = 39/275 (14%), Positives = 78/275 (28%), Gaps = 56/275 (20%)

Query: 34  TFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELV 93
           T N+         N  Q             R   I      +   ++ L E +  N    
Sbjct: 14  THNVYMLSTNLYPNWGQT-----------ERADLIGAADYIKNQDVVILNEVF-DNSASD 61

Query: 94  DMYEKRLSDAGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVE 153
            +      +       L R++                + NY      D G  VA +    
Sbjct: 62  RLLGNLKKEYPNQTAVLGRSSGSE---------WDKTLGNYSSSTPEDGG--VAIVSKWP 110

Query: 154 LID----PFSQCRNGDLR--------------QEILIVNTHL----LFPHDSSLSLVRLH 191
           + +     F++    D                + + ++ THL         +S + VR +
Sbjct: 111 IAEKIQYVFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQAEDSMCGKTSPASVRTN 170

Query: 192 QVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRS-QGFVSSYD------TA 244
           Q+ +I   +++    +N     +++ GD N +K                + +      T 
Sbjct: 171 QLKEIQDFIKNKNIPNN---EYVLIGGDMNVNKINAENNNDSEYASMFKTLNASVPSYTG 227

Query: 245 HQYT-DADAHKWVSHRNHRGNICGVDFIWLLNPNK 278
           H  T DA  +    +         +D+I     + 
Sbjct: 228 HTATWDATTNSIAKYNFPDSPAEYLDYIIASKDHA 262

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 Length = 67

 Score = 47.5 bits (114), Expect = 1e-07
 Identities = 14/59 (23%), Positives = 23/59 (38%), Gaps = 6/59 (10%)

Query: 311 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 368
            F K D + D  ++   F E                E+    + + D+DGNG ++  EF
Sbjct: 6   VFEKFDKNKDGKLSLDEFREVALAF---SPY--FTQEDIVKFFEEIDVDGNGELNADEF 59

>1zwx_A SMCL, sphingomyelinase-C; dnase1-like fold, beta-hairpin, hydrolase; 1.90A {Listeria ivanovii} SCOP: d.151.1.3 Length = 301

 Score = 51.6 bits (123), Expect = 2e-07
 Identities = 29/236 (12%), Positives = 66/236 (27%), Gaps = 33/236 (13%)

Query: 64  RNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLTA 123
           R   I      + + ++ L E +  +          L +  Y +       ++     T 
Sbjct: 34  RADLIAQADYMKNNDVVILNEAF--DTSASHRLLNNLREM-YPHQTPVIGRSKHGWDKTE 90

Query: 124 VHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLR--------------QE 169
            +   F + +    + + +      ++       F +    D                + 
Sbjct: 91  GNYSNFALEDGGVAVVSQW-----PIVEKSQH-IFQRGGGADRLSNKGFAYVKIMKNGKP 144

Query: 170 ILIVNTHLLFPHDSSL----SLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKR 225
             I+ TH               +R  Q+ +I   +       +     I + GD N +  
Sbjct: 145 YHIIGTHTQADDSLISKDTSRAIRAEQMQEIQTFIAKKNIPKDE---IIFIGGDLNVNYG 201

Query: 226 GHVYKFLRSQGFVSSYD--TAHQYT-DADAHKWVSHRNHRGNICGVDFIWLLNPNK 278
              Y  +     VSS         T D   +  +     +     +D+I++ N + 
Sbjct: 202 TDEYHDMLKLLNVSSPANFNGQMATWDPTTNSMLKESYPKAAPEYLDYIFVENGHA 257

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} Length = 204

 Score = 50.4 bits (121), Expect = 2e-07
 Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 12/90 (13%)

Query: 311 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 369
            F + D DG   +    F + L +L L      L   E + +  + D +G+G +D +EF 
Sbjct: 42  FFRQLDRDGSRSLDADEFRQGLAKLGLV-----LDQAEAEGVCRKWDRNGSGTLDLEEFL 96

Query: 370 QRIWKTTWSDQRNDLN------DEDEDGFV 393
           + +       +   +       D   DG V
Sbjct: 97  RALRPPMSQAREAVIAAAFAKLDRSGDGVV 126

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} Length = 204

 Score = 40.4 bits (95), Expect = 4e-04
 Identities = 16/66 (24%), Positives = 21/66 (31%), Gaps = 4/66 (6%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHG--LADEETKDLWVQADI-DGNGVVD 364
            AFA L    DG  +T                + G    DE  +      D  + +G V 
Sbjct: 113 AAFAKLDRSGDG-VVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVT 171

Query: 365 YKEFQQ 370
             EFQ 
Sbjct: 172 LAEFQD 177

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A Length = 147

 Score = 48.8 bits (116), Expect = 3e-07
 Identities = 12/65 (18%), Positives = 22/65 (33%), Gaps = 6/65 (9%)

Query: 311 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 369
            +++ D +G+  I        LE+L   G        E K L  +          Y +F 
Sbjct: 53  KYMEFDLNGNGDIDIMSLKRMLEKL---GVP--KTHLELKRLIREVSSGSEETFSYSDFL 107

Query: 370 QRIWK 374
           + +  
Sbjct: 108 RMMLG 112

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} Length = 92

 Score = 46.8 bits (112), Expect = 4e-07
 Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 9/82 (10%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
           +AF     D +G YI+ S     +  L   G K  L DEE + +  +AD+DG+G V+Y+E
Sbjct: 13  EAFKVFDKDQNG-YISASELRHVMINL---GEK--LTDEEVEQMIKEADLDGDGQVNYEE 66

Query: 368 FQQRIWKTTWSDQRNDLNDEDE 389
           F + +            N    
Sbjct: 67  FVKMMMTV---RGGGGGNGWSR 85

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B Length = 166

 Score = 48.7 bits (117), Expect = 5e-07
 Identities = 24/84 (28%), Positives = 29/84 (34%), Gaps = 14/84 (16%)

Query: 292 FGMFKCLLRRASLTETD-------AFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLA 344
           F +F  +     L   D       AF  L  D  G  I  S   E L      G +    
Sbjct: 77  FTVFLTMFGE-KLKGADPEDVIMGAFKVLDPDGKG-SIKKSFLEELLTTG---GGR--FT 129

Query: 345 DEETKDLWVQADIDGNGVVDYKEF 368
            EE K++W     D  G VDYK  
Sbjct: 130 PEEIKNMWAAFPPDVAGNVDYKNI 153

>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi} Length = 219

 Score = 49.5 bits (118), Expect = 5e-07
 Identities = 21/93 (22%), Positives = 34/93 (36%), Gaps = 11/93 (11%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
             F  + A  +   +    F  A+ +L       G   E+   L+ + D +G G V + E
Sbjct: 134 VMFDEIDASGNM-LVDEEEFKRAVPKLEA----WGAKVEDPAALFKELDKNGTGSVTFDE 188

Query: 368 FQQRIWKTTWSDQRNDLNDEDEDGFVKSSLEQT 400
           F        W+       D D D   +S+LE  
Sbjct: 189 F------AAWASAVKLDADGDPDNVPESALEHH 215

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} Length = 143

 Score = 47.5 bits (114), Expect = 6e-07
 Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 14/84 (16%)

Query: 292 FGMFKCLLRRASLTETD-------AFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLA 344
           F MF  +     L  TD       AFA    +  G +I      E L  +   G +    
Sbjct: 58  FTMFLTMFGE-KLNGTDPEDVIRNAFACFDEEASG-FIHEDHLRELLTTM---GDR--FT 110

Query: 345 DEETKDLWVQADIDGNGVVDYKEF 368
           DEE  +++ +A ID  G  +Y EF
Sbjct: 111 DEEVDEMYREAPIDKKGNFNYVEF 134

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A Length = 191

 Score = 48.4 bits (116), Expect = 8e-07
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
            AF     DNDG  IT +     L   N  G+         K +    D + +G +D+ E
Sbjct: 126 CAFRVFDVDNDG-EITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHE 184

Query: 368 FQQ 370
           F +
Sbjct: 185 FSE 187

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A Length = 191

 Score = 43.0 bits (102), Expect = 5e-05
 Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 7/61 (11%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
             F  L  D  G YIT     + LE+    G K          L  Q D DG+G +DY E
Sbjct: 56  STFLVLDEDGKG-YITKEQLKKGLEKD---GLK---LPYNFDLLLDQIDSDGSGKIDYTE 108

Query: 368 F 368
           F
Sbjct: 109 F 109

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} Length = 180

 Score = 48.1 bits (115), Expect = 8e-07
 Identities = 11/59 (18%), Positives = 22/59 (37%), Gaps = 8/59 (13%)

Query: 311 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 368
            F K D + +  +++      L  +       G+   +   +    DI+  G + Y EF
Sbjct: 44  LFYKLDTNHNGSLSHREIYTVLASV-------GIKKWDINRILQALDINDRGNITYTEF 95

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} Length = 180

 Score = 42.3 bits (100), Expect = 8e-05
 Identities = 12/71 (16%), Positives = 25/71 (35%), Gaps = 16/71 (22%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGV----- 362
            AF  +  D DG YI+ S     +    L        + +  + ++       G+     
Sbjct: 112 AAFNKIDKDEDG-YISKSDIVSLVHDKVLD-------NNDIDNFFLSVHSIKKGIPREHI 163

Query: 363 ---VDYKEFQQ 370
              + ++EF+ 
Sbjct: 164 INKISFQEFKD 174

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134

 Score = 46.8 bits (112), Expect = 1e-06
 Identities = 20/94 (21%), Positives = 33/94 (35%), Gaps = 15/94 (15%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
             F  +  + DG  ++Y      + +           ++  + ++   D DGNG +D  E
Sbjct: 4   ALFKEIDVNGDG-AVSYEEVKAFVSKK---RAI--KNEQLLQLIFKSIDADGNGEIDQNE 57

Query: 368 F---QQRIWKTTWSDQRNDLN------DEDEDGF 392
           F      I     SD +  L       D D DG 
Sbjct: 58  FAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGK 91

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134

 Score = 44.4 bits (106), Expect = 8e-06
 Identities = 11/63 (17%), Positives = 25/63 (39%), Gaps = 10/63 (15%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
             +  +  D DG  +T        ++            E+  +  ++AD +G+G +  +E
Sbjct: 79  VLYKLMDVDGDG-KLTKEEVTSFFKKHG---------IEKVAEQVMKADANGDGYITLEE 128

Query: 368 FQQ 370
           F +
Sbjct: 129 FLE 131

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 145

 Score = 46.8 bits (112), Expect = 1e-06
 Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 13/84 (15%)

Query: 292 FGMFKCLLRRASLTETD-------AFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLA 344
              FK + R+   T T+       AF  L  + +G  I  +   + L  L   G    L 
Sbjct: 57  LATFKTVYRKPIKTPTEQSKEMLDAFRALDKEGNG-TIQEAELRQLLLNL---GDA--LT 110

Query: 345 DEETKDLWVQADIDGNGVVDYKEF 368
             E ++L  +  + G+G ++Y+ F
Sbjct: 111 SSEVEELMKEVSVSGDGAINYESF 134

>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A Length = 81

 Score = 45.2 bits (108), Expect = 1e-06
 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 5/61 (8%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
            AF    A+ DG  I +  F   ++++   G +  L D E ++   +AD DGNGV+D  E
Sbjct: 12  RAFKVFDANGDG-VIDFDEFKFIMQKV---GEE-PLTDAEVEEAMKEADEDGNGVIDIPE 66

Query: 368 F 368
           F
Sbjct: 67  F 67

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} Length = 77

 Score = 44.8 bits (107), Expect = 1e-06
 Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 6/61 (9%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
           +AF     +  G  I Y     A+  L   G    +   E  +L  + D +GNG + + +
Sbjct: 11  EAFDLFDTNKTG-SIDYHELKVAMRAL---GFD--VKKPEILELMNEYDREGNGYIGFDD 64

Query: 368 F 368
           F
Sbjct: 65  F 65

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} Length = 166

 Score = 46.7 bits (112), Expect = 2e-06
 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 8/63 (12%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
            AF +   D  G YIT     +A E+  +        D   ++L    D D +G +DY E
Sbjct: 103 AAFTYFDKDGSG-YITPDELQQACEEFGVE-------DVRIEELMRDVDQDNDGRIDYNE 154

Query: 368 FQQ 370
           F  
Sbjct: 155 FVA 157

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} Length = 166

 Score = 46.7 bits (112), Expect = 2e-06
 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 12/82 (14%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
           + F  + AD  G  IT+      L+++   G    L + E  DL   AD+D +G +DYKE
Sbjct: 31  EMFNMIDADKSG-QITFEELKAGLKRV---GAN--LKESEILDLMQAADVDNSGTIDYKE 84

Query: 368 FQQRIWKTTWSDQRNDLNDEDE 389
           F         +   N +  ED 
Sbjct: 85  F------IAATLHLNKIEREDH 100

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} Length = 71

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 6/61 (9%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
            AF     D DG +IT      A+  L   G    L  EE   +  +AD+D +G V+Y+E
Sbjct: 10  VAFRAFDQDGDG-HITVDELRRAMAGL---GQP--LPQEELDAMIREADVDQDGRVNYEE 63

Query: 368 F 368
           F
Sbjct: 64  F 64

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Length = 179

 Score = 46.8 bits (112), Expect = 2e-06
 Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 16/96 (16%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
           +AF     D +G YI+ +     +  L   G K  L DEE  ++  +ADIDG+G V+Y+E
Sbjct: 88  EAFRVFDKDGNG-YISAAELRHVMTNL---GEK--LTDEEVDEMIREADIDGDGQVNYEE 141

Query: 368 F----QQRIWKTTWSDQRNDLN------DEDEDGFV 393
           F      +      + ++  +        +    F 
Sbjct: 142 FVQMMTAKGGGGGAAARKEVIRNKIRAIGKMARVFS 177

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Length = 179

 Score = 40.2 bits (95), Expect = 4e-04
 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 6/61 (9%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
           +AF+    D DG  IT       +  L   G      + E +D+  + D DGNG +D+ E
Sbjct: 15  EAFSLFDKDGDG-TITTKELGTVMRSL---GQN--PTEAELQDMINEVDADGNGTIDFPE 68

Query: 368 F 368
           F
Sbjct: 69  F 69

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 188

 Score = 46.8 bits (112), Expect = 2e-06
 Identities = 22/100 (22%), Positives = 34/100 (34%), Gaps = 22/100 (22%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
            AF++   D  G YIT     +A +   L        D    D+  + D D +G +DY E
Sbjct: 86  SAFSYFDKDGSG-YITLDEIQQACKDFGLD-------DIHIDDMIKEIDQDNDGQIDYGE 137

Query: 368 F------QQRIWKTTWSDQRNDLN--------DEDEDGFV 393
           F      ++          R  LN        D   +  +
Sbjct: 138 FAAMMRKRKGNGGIGRRTMRKTLNLRDALGLVDNGSNQVI 177

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 188

 Score = 44.5 bits (106), Expect = 2e-05
 Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 12/91 (13%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
           + F  +  DN G  IT+    + L+++   G +  L + E KDL   ADID +G +DY E
Sbjct: 14  ELFKMIDTDNSG-TITFDELKDGLKRV---GSE--LMESEIKDLMDAADIDKSGTIDYGE 67

Query: 368 FQQRIWKTTWSDQRNDLN------DEDEDGF 392
           F          ++  +L       D+D  G+
Sbjct: 68  FIAATVHLNKLEREENLVSAFSYFDKDGSGY 98

>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} Length = 107

 Score = 45.1 bits (107), Expect = 3e-06
 Identities = 11/61 (18%), Positives = 18/61 (29%), Gaps = 6/61 (9%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
           + +     + +G  I        LE+L   G        E K L  +          Y +
Sbjct: 36  EKYMEFDLNGNG-DIDIMSLKRMLEKL---GVP--KTHLELKKLIGEVSSGSGETFSYPD 89

Query: 368 F 368
           F
Sbjct: 90  F 90

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} Length = 94

 Score = 44.6 bits (106), Expect = 3e-06
 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 11/84 (13%)

Query: 292 FGMFKCLLRRASLTET-----DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADE 346
            G           T++     +AF     D +G YI+ +     +  L   G K  L DE
Sbjct: 12  SGENLYFQSLMKDTDSEEEIREAFRVEDKDGNG-YISAAELRHVMTNL---GEK--LTDE 65

Query: 347 ETKDLWVQADIDGNGVVDYKEFQQ 370
           E  ++  +ADIDG+G V+Y+EF Q
Sbjct: 66  EVDEMIREADIDGDGQVNYEEFVQ 89

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A Length = 90

 Score = 44.1 bits (105), Expect = 3e-06
 Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 12/74 (16%)

Query: 301 RASLTET------DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQ 354
           RA L+E        AF    AD  G  I+       +  L   G       EE   +  +
Sbjct: 11  RAFLSEEMIAEFKAAFDMFDADGGG-DISTKELGTVMRML---GQN--PTKEELDAIIEE 64

Query: 355 ADIDGNGVVDYKEF 368
            D DG+G +D++EF
Sbjct: 65  VDEDGSGTIDFEEF 78

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} Length = 191

 Score = 46.5 bits (111), Expect = 3e-06
 Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 8/63 (12%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
            AF    +D  G  IT            +        DE    +  + D + +G VD++E
Sbjct: 127 AAFQQFDSDGSG-KITNEELGRLFGVTEVD-------DETWHQVLQECDKNNDGEVDFEE 178

Query: 368 FQQ 370
           F +
Sbjct: 179 FVE 181

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} Length = 191

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 14/67 (20%), Positives = 21/67 (31%), Gaps = 7/67 (10%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHK------HGLADEETKDLWVQADIDGNG 361
             F  L  + DG  +      E   +L                + E   +    D D NG
Sbjct: 44  QIFRQLDNNGDG-QLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNG 102

Query: 362 VVDYKEF 368
            ++Y EF
Sbjct: 103 YIEYSEF 109

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} Length = 196

 Score = 46.5 bits (111), Expect = 3e-06
 Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 13/83 (15%)

Query: 292 FGMFKCLLRRASLTETDAFA-FLKA-----DNDGDYITYSGFCEALEQLNLTGHKHGLAD 345
           F MF  +     +  TD     + A     + DG          +L      G K   + 
Sbjct: 108 FTMFLTIFGD-RIAGTDEEDVIVNAFNLFDEGDG-KCKEETLKRSLTTW---GEK--FSQ 160

Query: 346 EETKDLWVQADIDGNGVVDYKEF 368
           +E      +A IDGNG++D K+F
Sbjct: 161 DEVDQALSEAPIDGNGLIDIKKF 183

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176

 Score = 45.9 bits (109), Expect = 4e-06
 Identities = 14/62 (22%), Positives = 21/62 (33%), Gaps = 8/62 (12%)

Query: 310 FAFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 368
                 D + D  I    F   L  L       G++  E  + + Q D +GNG +   E 
Sbjct: 106 GIVGMCDKNADGQINADEFAAWLTAL-------GMSKAEAAEAFNQVDTNGNGELSLDEL 158

Query: 369 QQ 370
             
Sbjct: 159 LT 160

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176

 Score = 42.0 bits (99), Expect = 9e-05
 Identities = 9/102 (8%), Positives = 29/102 (28%), Gaps = 18/102 (17%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDL-----------WVQAD 356
             F     D +G  +  + F +  + +            E + L             +A 
Sbjct: 11  KRFDRWDFDGNG-ALERADFEKEAQHI-AEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAG 68

Query: 357 IDGNGVVDYKEFQQRIWKTTWSDQRNDLNDEDEDGFVKSSLE 398
           +  +G +  ++F          +   +  +   +  +   ++
Sbjct: 69  VGSDGSLTEEQF-----IRVTENLIFEQGEASFNRVLGPVVK 105

>3teb_A Endonuclease/exonuclease/phosphatase; PSI-biology, MCSG, midwest center for structural genomics; 2.99A {Leptotrichia buccalis c-1013-b} Length = 266

 Score = 47.2 bits (112), Expect = 5e-06
 Identities = 35/245 (14%), Positives = 72/245 (29%), Gaps = 55/245 (22%)

Query: 60  YWFGRNQR-----ILDWLLYERSSIICLQEFWVGNEELVDMYE-----------KRLSDA 103
            W   NQ      +   +  ++  +I +QE        +   +           + L   
Sbjct: 13  AWLEENQMEKIDILARTIAEKQYDVIAMQEVNQLMNNKIIFDDIREENYAWVLLETLQKY 72

Query: 104 GYVNFKLARTNNR--------GDGLLT---AVHKDYFRVVNYRDLLFNDFGDRVAQLLHV 152
              ++ L  +N+         G  ++T      +D F     +         R    + +
Sbjct: 73  TDTDYYLHWSNSHIGFGKYNEGVAVITRHKIKAEDEFYCTFAQS--VRTISARRI--VSI 128

Query: 153 ELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPI 212
            +             Q+I   + H+  P+  +        +  IL   ++          
Sbjct: 129 TINYE---------GQDIEFYSCHMNLPNCETED--MGKNIQTILNRTQNSN-------- 169

Query: 213 PIILCGDWNGS--KRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRNHRGNICG--V 268
             IL GD+N         Y+ + SQG   +Y  A +  D       S      +     +
Sbjct: 170 LKILMGDFNTDAIGNVAAYENILSQGLFDTYVMAEK-KDDGITVDKSIHGWDNDKAKKRL 228

Query: 269 DFIWL 273
           D+I+ 
Sbjct: 229 DYIFS 233

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A Length = 86

 Score = 43.4 bits (103), Expect = 5e-06
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 9/62 (14%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQL-NLTGHKHGLADEETKDLWVQADIDGNGVVDYK 366
             F     + DG  I+ S   +AL+ L ++T        +E + +  + D DG+G + + 
Sbjct: 15  RIFKRFDTNGDG-KISSSELGDALKTLGSVT-------PDEVRRMMAEIDTDGDGFISFD 66

Query: 367 EF 368
           EF
Sbjct: 67  EF 68

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 47.8 bits (114), Expect = 5e-06
 Identities = 28/136 (20%), Positives = 45/136 (33%), Gaps = 18/136 (13%)

Query: 243 TAHQYTDADAHKWV------SHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFK 296
           +A Q   A  H W+                      +      +KL +A    A+  M  
Sbjct: 285 SAQQ---ALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQA----ALLYMAS 337

Query: 297 CLLRRASLTE-TDAFAFLKADNDGDYITYSGFCEALEQLN---LTGHKHGLADEETKDLW 352
            L  +    E TD F  +  + DG  +      +   +L+   +        + E   + 
Sbjct: 338 KLTSQEETKELTDIFRHIDKNGDG-QLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAIL 396

Query: 353 VQADIDGNGVVDYKEF 368
             AD D NG +DY EF
Sbjct: 397 GAADFDRNGYIDYSEF 412

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 40.5 bits (95), Expect = 8e-04
 Identities = 15/77 (19%), Positives = 30/77 (38%), Gaps = 11/77 (14%)

Query: 297 CLLRRASLTET---DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWV 353
            + R++ L++     AF     D +G  I+                   L  +  K++  
Sbjct: 416 AMDRKSLLSKDKLESAFQKFDQDGNG-KISVDELASVFGL-------DHLESKTWKEMIS 467

Query: 354 QADIDGNGVVDYKEFQQ 370
             D + +G VD++EF +
Sbjct: 468 GIDSNNDGDVDFEEFCK 484

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} Length = 211

 Score = 46.3 bits (110), Expect = 5e-06
 Identities = 17/89 (19%), Positives = 29/89 (32%), Gaps = 11/89 (12%)

Query: 311 AFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQ 370
            F+     G   T   F   L    L    +  A++    ++   D + +G VD+ EF  
Sbjct: 27  TFMMEYPSG-LQTLHEFKTLLGLQGL----NQKANKHIDQVYNTFDTNKDGFVDFLEFIA 81

Query: 371 RIWKTTWSDQRNDLN------DEDEDGFV 393
            +           L       D D +G +
Sbjct: 82  AVNLIMQEKMEQKLKWYFKLYDADGNGSI 110

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} Length = 211

 Score = 43.2 bits (102), Expect = 5e-05
 Identities = 14/75 (18%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 298 LLRRASLTETDAFAFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEE-TKDLWVQA 355
           L+ +  + +   + F   D DG+  I  +   +    +     +  L+ EE    ++ + 
Sbjct: 85  LIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKI 144

Query: 356 DIDGNGVVDYKEFQQ 370
           DI+ +G +  +EF  
Sbjct: 145 DINNDGELTLEEFIN 159

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166

 Score = 45.5 bits (108), Expect = 6e-06
 Identities = 23/91 (25%), Positives = 32/91 (35%), Gaps = 13/91 (14%)

Query: 286 SWSEAVFGMFKCLLRRASLTETDAFAFLKA-----DNDGD-YITYSGFCEALEQLNLTGH 339
           +  E V G  K L  +       A  FL A     D DGD  +T +    AL        
Sbjct: 73  TREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAF----- 127

Query: 340 KHGLADEETKDLWVQADIDGNGVVDYKEFQQ 370
             G+ ++  +      D DG+G V   E   
Sbjct: 128 --GVPEDLARQAAAALDTDGDGKVGETEIVP 156

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166

 Score = 42.8 bits (101), Expect = 4e-05
 Identities = 22/109 (20%), Positives = 34/109 (31%), Gaps = 26/109 (23%)

Query: 309 AFAFLKADNDGDYITYSGFCEALEQLNLTGHK----------HGLADEETKDLWVQADID 358
            F     D +G +I  S F  A + +                +G A+   + L   AD D
Sbjct: 9   RFTTFDQDGNG-HIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRD 67

Query: 359 GNGVVDYKEFQQRIWKTTWSDQRNDLN--------------DEDEDGFV 393
           G+  +  +EF          D+ +                 D D DG V
Sbjct: 68  GDQRITREEFVT-GAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAV 115

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A Length = 150

 Score = 45.2 bits (107), Expect = 6e-06
 Identities = 9/59 (15%), Positives = 22/59 (37%), Gaps = 6/59 (10%)

Query: 311 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 368
            +++ D + +  I        +E+L   G        E K +  +     +  + Y++F
Sbjct: 55  KYMEFDLNNEGEIDLMSLKRMMEKL---GVP--KTHLEMKKMISEVTGGVSDTISYRDF 108

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 47.4 bits (113), Expect = 6e-06
 Identities = 31/179 (17%), Positives = 59/179 (32%), Gaps = 27/179 (15%)

Query: 243 TAHQYTDADAHKWVSHRNHRGNICGVDFIW-----LLNPNKYRKLLKASWSEAVFGMFKC 297
           +A     A  H+W+           V  +      +      +KL +A    A+  M   
Sbjct: 275 SARD---ALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQA----ALLYMGSK 327

Query: 298 LLRRASLTE-TDAFAFLKADNDGDYITYSGFCEALEQLNLTGHK------HGLADEETKD 350
           L  +    E T  F  +  + DG  +  +   E  ++L     +          + E   
Sbjct: 328 LTSQDETKELTAIFHKMDKNGDG-QLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQ 386

Query: 351 LWVQADIDGNGVVDYKEF------QQRIWKTTWSDQRNDLNDEDEDGFV-KSSLEQTIG 402
           +    D D NG ++Y EF      ++ +      ++   + D D  G +  + L    G
Sbjct: 387 VLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFG 445

>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A Length = 83

 Score = 43.0 bits (102), Expect = 8e-06
 Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 310 FAFLKADNDGD-YITYSGFCEALEQL-NLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
            AF K D +GD Y+T       +  L            E +  L   AD + +G +  +E
Sbjct: 11  AAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEE 70

Query: 368 F 368
           F
Sbjct: 71  F 71

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Length = 195

 Score = 45.5 bits (108), Expect = 8e-06
 Identities = 12/63 (19%), Positives = 21/63 (33%), Gaps = 6/63 (9%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
             F     D  G  IT   +    +     G     + E+ +  +   D+D  G +D  E
Sbjct: 117 AVFDIFDKDGSG-TITLDEWKAYGKIS---GIS--PSQEDCEATFRHCDLDNAGDLDVDE 170

Query: 368 FQQ 370
             +
Sbjct: 171 MTR 173

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A Length = 158

 Score = 44.9 bits (107), Expect = 8e-06
 Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 8/83 (9%)

Query: 308 DAFA-FLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYK 366
            AF  F   +  G  ++       LE L   G +        + L  + D  GNG +D+ 
Sbjct: 17  TAFRDFETPEGSG-RVSTDQIGIILEVL---GIQ--QTKSTIRQLIDEFDPFGNGDIDFD 70

Query: 367 EFQQRIWKTTWSDQRNDLNDEDE 389
            F+  I      ++ N    + E
Sbjct: 71  SFKI-IGARFLGEEVNPEQMQQE 92

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A Length = 158

 Score = 43.3 bits (103), Expect = 3e-05
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 6/61 (9%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
           +AF     + +G YI+     E L +L        L+ E+   +  + D DG+G VD++E
Sbjct: 95  EAFRLYDKEGNG-YISTDVMREILAEL---DET--LSSEDLDAMIDEIDADGSGTVDFEE 148

Query: 368 F 368
           F
Sbjct: 149 F 149

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323

 Score = 46.3 bits (110), Expect = 1e-05
 Identities = 12/65 (18%), Positives = 26/65 (40%), Gaps = 5/65 (7%)

Query: 306 ETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDY 365
               +AF   D  G  ++     + LE  ++       A ++ +  +   D+D +  + Y
Sbjct: 255 LRILYAFADFDKSG-QLSKEEVQKVLEDAHI----PESARKKFEHQFSVVDVDDSKSLSY 309

Query: 366 KEFQQ 370
           +EF  
Sbjct: 310 QEFVM 314

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323

 Score = 45.6 bits (108), Expect = 2e-05
 Identities = 13/89 (14%), Positives = 27/89 (30%), Gaps = 18/89 (20%)

Query: 311 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 369
            FL +   G    ++    + L +         + +   K L+V  + D  G + Y    
Sbjct: 127 LFLSSAVSGSGKFSFQDLKQVLAKYA-----DTIPEGPLKKLFVMVENDTKGRMSYITLV 181

Query: 370 QRIWKTTWSDQRNDLN------DEDEDGF 392
                   ++    L       D + +G 
Sbjct: 182 ------AVANDLAALVADFRKIDTNSNGT 204

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323

 Score = 43.6 bits (103), Expect = 7e-05
 Identities = 11/63 (17%), Positives = 22/63 (34%), Gaps = 7/63 (11%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
             F  +  +++G  ++   F E   +L                L+  AD D +  V + E
Sbjct: 192 ADFRKIDTNSNG-TLSRKEFREHFVRLGFD------KKSVQDALFRYADEDESDDVGFSE 244

Query: 368 FQQ 370
           +  
Sbjct: 245 YVH 247

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 46.6 bits (111), Expect = 1e-05
 Identities = 29/135 (21%), Positives = 48/135 (35%), Gaps = 17/135 (12%)

Query: 243 TAHQYTDADAHKWVSHRNHRGN-----ICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKC 297
           TA +   A   +W+    +  N             +      +KL +A    A+  +   
Sbjct: 295 TAEE---ALNSRWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQA----AILFIGSK 347

Query: 298 LLRRASLTE-TDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHG---LADEETKDLWV 353
           L       E TD F  L  + DG  +      E    L    ++ G     +EE  ++  
Sbjct: 348 LTTLEERKELTDIFKKLDKNGDG-QLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILK 406

Query: 354 QADIDGNGVVDYKEF 368
           + D D NG ++Y EF
Sbjct: 407 EVDFDKNGYIEYSEF 421

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 40.5 bits (95), Expect = 9e-04
 Identities = 14/75 (18%), Positives = 26/75 (34%), Gaps = 10/75 (13%)

Query: 296 KCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQA 355
           + L     L    AF     D  G  IT                   ++++   D+  +A
Sbjct: 429 QILFSEERLRR--AFNLFDTDKSG-KITKEELANLFG-------LTSISEKTWNDVLGEA 478

Query: 356 DIDGNGVVDYKEFQQ 370
           D + + ++D+ EF  
Sbjct: 479 DQNKDNMIDFDEFVS 493

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208

 Score = 45.2 bits (107), Expect = 1e-05
 Identities = 10/74 (13%), Positives = 23/74 (31%), Gaps = 8/74 (10%)

Query: 298 LLRRASLTETDAFAFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQAD 356
               + +       +   D+DGD  +        ++          +  E     + +AD
Sbjct: 120 RGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAF-------DVPQEAAYTFFEKAD 172

Query: 357 IDGNGVVDYKEFQQ 370
            D +G ++  E   
Sbjct: 173 TDKSGKLERTELVH 186

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208

 Score = 45.2 bits (107), Expect = 1e-05
 Identities = 6/68 (8%), Positives = 22/68 (32%), Gaps = 11/68 (16%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDL-------WVQADIDGN 360
             F     D+DG  +         +++          DE+ + +       ++   ++  
Sbjct: 40  KRFDTFDLDSDG-KMEMDEVLYWPDRM---RQLVNATDEQVEKMRDAVRVFFLHKGVEPV 95

Query: 361 GVVDYKEF 368
             +  +++
Sbjct: 96  NGLLREDW 103

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... Length = 162

 Score = 44.5 bits (106), Expect = 1e-05
 Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 22/108 (20%)

Query: 301 RASLTE------TDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQ 354
           RA L+E        AF    AD  G  I+       +  L   G       EE   +  +
Sbjct: 11  RAFLSEEMIAEFKAAFDMFDADGGG-DISTKELGTVMRML---GQN--PTKEELDAIIEE 64

Query: 355 ADIDGNGVVDYKEF----QQRIWKTTWSDQRNDLN------DEDEDGF 392
            D DG+G +D++EF     +++ +        +L       D++ DGF
Sbjct: 65  VDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGF 112

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... Length = 162

 Score = 44.1 bits (105), Expect = 1e-05
 Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 6/61 (9%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
           + F     + DG +I      E L      G    + +E+ +DL   +D + +G +D+ E
Sbjct: 100 NCFRIFDKNADG-FIDIEELGEILRAT---GEH--VTEEDIEDLMKDSDKNNDGRIDFDE 153

Query: 368 F 368
           F
Sbjct: 154 F 154

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A Length = 186

 Score = 44.7 bits (106), Expect = 1e-05
 Identities = 15/103 (14%), Positives = 31/103 (30%), Gaps = 18/103 (17%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKD----LWVQADIDGNGVV 363
                +    DG +I+   +     ++           EET+     +  Q  +     +
Sbjct: 18  TRMQRVDVTGDG-FISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRI 76

Query: 364 DYKEF-------------QQRIWKTTWSDQRNDLNDEDEDGFV 393
             +E              +++      S    D  D D+DG+V
Sbjct: 77  SVEEAAVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYV 119

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A Length = 186

 Score = 44.0 bits (104), Expect = 2e-05
 Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 11/91 (12%)

Query: 286 SWSEAVFGMFKCLLRRASLTETDA-----FAFLKADNDGD-YITYSGFCEALEQLNLTGH 339
           S  EA       LL+     +  A       +   D D D Y++   F   L+ +     
Sbjct: 77  SVEEAAVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVG---- 132

Query: 340 KHGLADEETKDLWVQADIDGNGVVDYKEFQQ 370
              L D++    +   D + NG +   EF  
Sbjct: 133 -PDLTDDKAITCFNTLDFNKNGQISRDEFLV 162

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191

 Score = 44.8 bits (106), Expect = 1e-05
 Identities = 16/83 (19%), Positives = 27/83 (32%), Gaps = 12/83 (14%)

Query: 311 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 369
            F   D D +  IT   +    +     G     + E+ ++ +   DID +G +D  E  
Sbjct: 114 LFDIVDKDQNGAITLDEWKAYTKAA---GII--QSSEDCEETFRVCDIDESGQLDVDEM- 167

Query: 370 QRIWKTTWSDQRNDLNDEDEDGF 392
            R     W        D   +  
Sbjct: 168 TRQHLGFWYT-----MDPACEKL 185

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} Length = 197

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 4/61 (6%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
             F F   D +G  I+         + ++  +   L D+    L  + D++G+G +D+ E
Sbjct: 133 IPFKFFDIDGNG-KISVEELKRIFGRDDI-ENP--LIDKAIDSLLQEVDLNGDGEIDFHE 188

Query: 368 F 368
           F
Sbjct: 189 F 189

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} Length = 197

 Score = 44.5 bits (106), Expect = 2e-05
 Identities = 11/61 (18%), Positives = 26/61 (42%), Gaps = 6/61 (9%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
           + F  L  DN G  ++     + L+++   G++      +   +    D + +G + Y +
Sbjct: 61  NIFIALDVDNSG-TLSSQEILDGLKKI---GYQ--KIPPDIHQVLRDIDSNASGQIHYTD 114

Query: 368 F 368
           F
Sbjct: 115 F 115

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A Length = 214

 Score = 44.9 bits (106), Expect = 1e-05
 Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%)

Query: 294 MFKCLLRRASLTETDAFAFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDL- 351
           +       A+      +AF   D D D  +        +  L   G    L+  E K L 
Sbjct: 117 LLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLI 176

Query: 352 ---WVQADIDGNGVVDYKEFQQRIWKT 375
                ++DID +G ++  EFQ  I ++
Sbjct: 177 DNILEESDIDRDGTINLSEFQHVISRS 203

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263

 Score = 45.2 bits (107), Expect = 1e-05
 Identities = 13/88 (14%), Positives = 24/88 (27%), Gaps = 4/88 (4%)

Query: 311 AFLKADNDGD-YITYSGFCEALEQL--NLTGH-KHGLADEETKDLWVQADIDGNGVVDYK 366
            + K D D   +I        L+ L              E T  +    D + +G ++  
Sbjct: 108 TWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELT 167

Query: 367 EFQQRIWKTTWSDQRNDLNDEDEDGFVK 394
           E  + +        +          F K
Sbjct: 168 EMARLLPVQENFLLKFQGIKMCGKEFNK 195

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... Length = 156

 Score = 43.7 bits (104), Expect = 2e-05
 Identities = 19/84 (22%), Positives = 31/84 (36%), Gaps = 15/84 (17%)

Query: 292 FGMFKCLLRRASLTETD-------AFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLA 344
           F MF  +     L+ TD       AFA          +      + LE +   G      
Sbjct: 69  FTMFLSIFSD-KLSGTDSEETIRNAFAMFDEQETK-KLNIEYIKDLLENM---GDN--FN 121

Query: 345 DEETKDLWVQADIDGNGVVDYKEF 368
            +E +  + +A ++G G  DY +F
Sbjct: 122 KDEMRMTFKEAPVEG-GKFDYVKF 144

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} Length = 198

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 15/89 (16%), Positives = 31/89 (34%), Gaps = 11/89 (12%)

Query: 311 AFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQ 370
            F+     G  +T   F +     NL       A++  + ++   D + +G +D+ E+  
Sbjct: 22  KFMTECPSG-QLTLYEFKQFFGLKNL----SPSANKYVEQMFETFDFNKDGYIDFMEYVA 76

Query: 371 RIWKTTWSDQRNDLN------DEDEDGFV 393
            +           L       D D +G +
Sbjct: 77  ALSLVLKGKVDQKLRWYFKLYDVDGNGCI 105

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A Length = 169

 Score = 43.7 bits (104), Expect = 2e-05
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 6/69 (8%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
            AF     DN G  IT        ++L   G    L +EE +++  +AD + +  +D  E
Sbjct: 105 KAFRLFDDDNSG-TITIKDLRRVAKEL---GEN--LTEEELQEMIAEADRNDDNEIDEDE 158

Query: 368 FQQRIWKTT 376
           F + + KT+
Sbjct: 159 FIRIMKKTS 167

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A Length = 169

 Score = 42.6 bits (101), Expect = 6e-05
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 17/96 (17%)

Query: 300 RRASLTET------DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWV 353
            R  LTE       +AF     D  G  I       A+  L   G +     EE K +  
Sbjct: 18  GRVGLTEEQKQEIREAFDLFDTDGSG-TIDAKELKVAMRAL---GFE--PKKEEIKKMIS 71

Query: 354 QADIDGNGVVDYKEFQQRIWKTTWSDQRNDLNDEDE 389
           + D DG+G +D++EF   +     + +  + +  +E
Sbjct: 72  EIDKDGSGTIDFEEFLTMM-----TAKMGERDSREE 102

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} Length = 135

 Score = 43.1 bits (102), Expect = 2e-05
 Identities = 15/84 (17%), Positives = 34/84 (40%), Gaps = 6/84 (7%)

Query: 294 MFKCLLRRASLTET-DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLW 352
           M + +     ++E    F+ L        IT          L +     G++ E+ + + 
Sbjct: 29  MAEKMDVEEFVSELCKGFSLLADPERH-LITAESLRRNSGILGI----EGMSKEDAQGMV 83

Query: 353 VQADIDGNGVVDYKEFQQRIWKTT 376
            + D+DG+G ++  EF   + + +
Sbjct: 84  REGDLDGDGALNQTEFCVLMVRLS 107

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A Length = 148

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 6/67 (8%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
            AF     ++ G  ++       L  L   G K  L D E  +L    ++D NG +DYK+
Sbjct: 87  KAFQVFDKESTG-KVSVGDLRYMLTGL---GEK--LTDAEVDELLKGVEVDSNGEIDYKK 140

Query: 368 FQQRIWK 374
           F + + +
Sbjct: 141 FIEDVLR 147

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A Length = 450

 Score = 45.7 bits (108), Expect = 2e-05
 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 6/61 (9%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
           +AF     D +G YI+ +     +  L   G K  L DEE  ++  +ADIDG+G V+Y+E
Sbjct: 389 EAFRVFDKDGNG-YISAAELRHVMTNL---GEK--LTDEEVDEMIREADIDGDGQVNYEE 442

Query: 368 F 368
           F
Sbjct: 443 F 443

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A Length = 143

 Score = 43.2 bits (103), Expect = 2e-05
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 6/61 (9%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
            AF     D  G  I++       ++L   G    L DEE +++  +AD DG+G V  +E
Sbjct: 83  KAFKLFDDDETG-KISFKNLKRVAKEL---GEN--LTDEELQEMIDEADRDGDGEVSEQE 136

Query: 368 F 368
           F
Sbjct: 137 F 137

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A Length = 143

 Score = 42.1 bits (100), Expect = 6e-05
 Identities = 17/82 (20%), Positives = 35/82 (42%), Gaps = 11/82 (13%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
           +AF    AD  G  I       A+  L   G +     EE K +  + D +G G +++ +
Sbjct: 10  EAFDLFDADGTG-TIDVKELKVAMRAL---GFE--PKKEEIKKMISEIDKEGTGKMNFGD 63

Query: 368 FQQRIWKTTWSDQRNDLNDEDE 389
           F   +     + + ++ + ++E
Sbjct: 64  FLTVM-----TQKMSEKDTKEE 80

>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 Length = 78

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 7/61 (11%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
             F     + DG  I+ S   +AL  L   G     + +E + +  + D DG+G +D+ E
Sbjct: 7   RIFKRFDTNGDG-KISLSELTDALRTL---GST---SADEVQRMMAEIDTDGDGFIDFNE 59

Query: 368 F 368
           F
Sbjct: 60  F 60

>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A Length = 76

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 4/70 (5%)

Query: 308 DAF-AFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYK 366
            AF  F   + D + I+       ++ L   G           ++  + D +G+G V ++
Sbjct: 9   GAFEVFAAKEGDPNQISKEELKLVMQTL---GPSLLKGMSTLDEMIEEVDKNGDGEVSFE 65

Query: 367 EFQQRIWKTT 376
           EF   + K +
Sbjct: 66  EFLVMMKKIS 75

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... Length = 148

 Score = 43.2 bits (103), Expect = 2e-05
 Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 6/59 (10%)

Query: 311 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 368
           AF   D DG+  I+ +     +  L   G K  L D+E  ++  +ADIDG+G ++Y+EF
Sbjct: 88  AFKVFDRDGNGLISAAELRHVMTNL---GEK--LTDDEVDEMIREADIDGDGHINYEEF 141

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... Length = 148

 Score = 38.6 bits (91), Expect = 9e-04
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 10/63 (15%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQL--NLTGHKHGLADEETKDLWVQADIDGNGVVDY 365
           +AFA    D DG  IT       +  L  N T       + E +D+  + D DGNG +D+
Sbjct: 14  EAFALFDKDGDG-TITTKELGTVMRSLGQNPT-------EAELQDMINEVDADGNGTIDF 65

Query: 366 KEF 368
            EF
Sbjct: 66  PEF 68

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A Length = 161

 Score = 43.3 bits (103), Expect = 2e-05
 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 6/61 (9%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
            AF     D+ G  I+        ++L   G    L DEE + +  + D+DG+G ++  E
Sbjct: 100 RAFQLFDDDHTG-KISIKNLRRVAKEL---GET--LTDEELRAMIEEFDLDGDGEINENE 153

Query: 368 F 368
           F
Sbjct: 154 F 154

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A Length = 161

 Score = 43.3 bits (103), Expect = 3e-05
 Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 11/82 (13%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
           +AF+    +NDG ++ Y     A++ L   G +  L   E  DL  + D +G  ++ Y +
Sbjct: 27  EAFSLFDMNNDG-FLDYHELKVAMKAL---GFE--LPKREILDLIDEYDSEGRHLMKYDD 80

Query: 368 FQQRIWKTTWSDQRNDLNDEDE 389
           F          ++    +  DE
Sbjct: 81  FY-----IVMGEKILKRDPLDE 97

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... Length = 161

 Score = 43.3 bits (103), Expect = 3e-05
 Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 6/61 (9%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
           D F     + DG YI        L+     G    + +++ ++L    D + +G +DY E
Sbjct: 99  DLFRMFDKNADG-YIDLEELKIMLQAT---GET--ITEDDIEELMKDGDKNNDGRIDYDE 152

Query: 368 F 368
           F
Sbjct: 153 F 153

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... Length = 161

 Score = 39.5 bits (93), Expect = 5e-04
 Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 17/97 (17%)

Query: 308 DAFA-FLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYK 366
            AF  F+    DG  I+     + +  L   G       EE +++  + D DG+G VD+ 
Sbjct: 22  AAFDIFVLGAEDG-SISTKELGKVMRML---GQN--PTPEELQEMIDEVDEDGSGTVDFD 75

Query: 367 EF----QQRIWKTTWSDQRNDLN------DEDEDGFV 393
           EF     + +   +      +L+      D++ DG++
Sbjct: 76  EFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYI 112

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174

 Score = 43.6 bits (103), Expect = 3e-05
 Identities = 15/110 (13%), Positives = 33/110 (30%), Gaps = 18/110 (16%)

Query: 286 SWSEAVFGMFKCLLRRASLTETDAF---AFLKADNDGD-YITYSGFCEALEQLNLTGHKH 341
             +  +  M + +    + +  +      F   D + D  I+   +      L       
Sbjct: 71  DETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGML------- 123

Query: 342 GLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTTWSDQRNDLNDEDEDG 391
           GL        +   D + +G++  +EF        +      +ND D   
Sbjct: 124 GLDKTMAPASFDAIDTNNDGLLSLEEF-VIAGSDFF------MNDGDSTN 166

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 Length = 204

 Score = 44.0 bits (104), Expect = 3e-05
 Identities = 13/88 (14%), Positives = 32/88 (36%), Gaps = 12/88 (13%)

Query: 312 FLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQR 371
           FL+    G  +    F    +  +     +  A +  + ++   D +G+  +D+ E+   
Sbjct: 31  FLEECPSG-TLFMHEFKRFFKVPD-----NEEATQYVEAMFRAFDTNGDNTIDFLEYVAA 84

Query: 372 IWKTTWSDQRNDLN------DEDEDGFV 393
           +         + L       D+D +G +
Sbjct: 85  LNLVLRGTLEHKLKWTFKIYDKDRNGCI 112

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 Length = 204

 Score = 39.8 bits (93), Expect = 7e-04
 Identities = 21/111 (18%), Positives = 38/111 (34%), Gaps = 9/111 (8%)

Query: 295 FKCLLRRASLTETDAFA---FLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKD 350
           FK   +     E   +    F   D +GD  I +  +  AL  +       G  + + K 
Sbjct: 45  FKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVL-----RGTLEHKLKW 99

Query: 351 LWVQADIDGNGVVDYKEFQQRIWKTTWSDQRNDLNDEDEDGFVKSSLEQTI 401
            +   D D NG +D +E    +       +   +  E E      + E+ +
Sbjct: 100 TFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVV 150

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 Length = 204

 Score = 39.4 bits (92), Expect = 8e-04
 Identities = 15/86 (17%), Positives = 29/86 (33%), Gaps = 13/86 (15%)

Query: 298 LLRRASLTETDAFAFLKADNDGD-YITYS------------GFCEALEQLNLTGHKHGLA 344
           L+ R +L     + F   D D +  I                   ++E       K    
Sbjct: 87  LVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTP 146

Query: 345 DEETKDLWVQADIDGNGVVDYKEFQQ 370
           +E    +++  D +G+G +   EF +
Sbjct: 147 EEVVDRIFLLVDENGDGQLSLNEFVE 172

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C Length = 151

 Score = 43.0 bits (102), Expect = 3e-05
 Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 7/63 (11%)

Query: 311 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 369
            F   D +G+  +  +     L  L   G K  + +EE + + +    D NG ++Y+ F 
Sbjct: 92  GFRVFDKEGNGKVMGAELRHVLTTL---GEK--MTEEEVETV-LAGHEDSNGCINYEAFL 145

Query: 370 QRI 372
           + I
Sbjct: 146 KHI 148

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A Length = 153

 Score = 42.1 bits (100), Expect = 5e-05
 Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 5/61 (8%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
           DAF     + DG  I+ S   EA+    L GH+  +   + +++    D++G+G VD++E
Sbjct: 92  DAFREFDTNGDG-EISTSELREAMR--ALLGHQ--VGHRDIEEIIRDVDLNGDGRVDFEE 146

Query: 368 F 368
           F
Sbjct: 147 F 147

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A Length = 153

 Score = 41.8 bits (99), Expect = 8e-05
 Identities = 20/96 (20%), Positives = 36/96 (37%), Gaps = 17/96 (17%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
           +AF     D DG YI        +  +   G+     + E  +L  Q +++  G VD+ +
Sbjct: 15  EAFREFDKDKDG-YINCRDLGNCMRTM---GYM--PTEMELIELSQQINMNLGGHVDFDD 68

Query: 368 F-----QQRIWKTTWSDQRNDLN------DEDEDGF 392
           F      + + +T       +L       D + DG 
Sbjct: 69  FVELMGPKLLAETADMIGVKELRDAFREFDTNGDGE 104

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 44.3 bits (105), Expect = 6e-05
 Identities = 26/142 (18%), Positives = 47/142 (33%), Gaps = 24/142 (16%)

Query: 243 TAHQYTDADAHKWVSHRNHRGN------ICGVDFIWLLNPNKYRKLLKASWSEAVFGMFK 296
           TA Q      H W+   +                  +      +KL +A    A+  M  
Sbjct: 270 TATQ---CLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQA----ALLYMAS 322

Query: 297 CLLRRASLTE-TDAFAFLKADNDGDYITYSGFCEALEQL---------NLTGHKHGLADE 346
            L       + T+ F  L  +NDG  +          +          +L  ++    ++
Sbjct: 323 KLTTLDETKQLTEIFRKLDTNNDG-MLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIED 381

Query: 347 ETKDLWVQADIDGNGVVDYKEF 368
           +   L    D+DG+G ++Y EF
Sbjct: 382 QIDSLMPLLDMDGSGSIEYSEF 403

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185

 Score = 42.6 bits (100), Expect = 6e-05
 Identities = 9/62 (14%), Positives = 17/62 (27%), Gaps = 8/62 (12%)

Query: 310 FAFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 368
           F F   D  GD  +    F    +          L   +   ++      G    D   +
Sbjct: 109 FLFKGMDVSGDGIVDLEEFQNYCKNF-------QLQCADVPAVYNVITDGGKVTFDLNRY 161

Query: 369 QQ 370
           ++
Sbjct: 162 KE 163

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272

 Score = 43.1 bits (101), Expect = 8e-05
 Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 4/64 (6%)

Query: 311 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHG---LADEETKDLWVQADIDGNGVVDYK 366
            + K D D   YI+ +     L+ L L   K       DE T  +    D + +G +D  
Sbjct: 109 IWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLN 168

Query: 367 EFQQ 370
           +  +
Sbjct: 169 DLAR 172

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* Length = 183

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 20/89 (22%), Positives = 33/89 (37%), Gaps = 5/89 (5%)

Query: 294 MFKCLLRRASLTETDAFAFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDL- 351
           +       A+      +AF   D D D  +        +  L   G    L+  E K L 
Sbjct: 86  LLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLI 145

Query: 352 ---WVQADIDGNGVVDYKEFQQRIWKTTW 377
                ++DID +G ++  EFQ  I ++  
Sbjct: 146 DNILEESDIDRDGTINLSEFQHVISRSPD 174

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Length = 191

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 10/62 (16%), Positives = 17/62 (27%), Gaps = 8/62 (12%)

Query: 310 FAFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 368
           F F   D  GD  I    +              G+   +    +      G  +V  + F
Sbjct: 113 FMFDVNDTSGDNIIDKHEYSTVYMSY-------GIPKSDCDAAFDTLSDGGKTMVTREIF 165

Query: 369 QQ 370
            +
Sbjct: 166 AR 167

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Length = 191

 Score = 39.4 bits (92), Expect = 8e-04
 Identities = 17/109 (15%), Positives = 34/109 (31%), Gaps = 26/109 (23%)

Query: 310 FAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETK----------DLWVQADIDG 359
             F   ++DG  I +  F  A++++           +  +           L   AD + 
Sbjct: 19  NTFYDCNHDG-VIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENE 77

Query: 360 NGVVDYKEF---------------QQRIWKTTWSDQRNDLNDEDEDGFV 393
           +  V  +E+                   W T + +   D+ND   D  +
Sbjct: 78  DEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNII 126

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* Length = 155

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 9/75 (12%)

Query: 310 FAFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLW----VQADIDGNGVVD 364
           FAF   D D D YI+     + L+   + G+   L D + + +     + AD DG+G + 
Sbjct: 79  FAFRIYDMDKDGYISNGELFQVLK--MMVGNN--LKDTQLQQIVDKTIINADKDGDGRIS 134

Query: 365 YKEFQQRIWKTTWSD 379
           ++EF   +       
Sbjct: 135 FEEFCAVVGGLDIHK 149

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 142

 Score = 40.9 bits (97), Expect = 2e-04
 Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 15/84 (17%)

Query: 292 FGMFKCLLRRASLTETD-------AFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLA 344
           F  F  ++ R  + +T        AF     +  G YI  +   +AL  L   G +  L 
Sbjct: 61  FPEFLSMMGR-RMKQTTSEDILRQAFRTFDPEGTG-YIPKAALQDALLNL---GDR--LK 113

Query: 345 DEETKDLWVQADIDGNGVVDYKEF 368
             E  +     + +  G + Y  F
Sbjct: 114 PHEFAEFLGITETE-KGQIRYDNF 136

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 142

 Score = 40.2 bits (95), Expect = 2e-04
 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 6/61 (9%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
           +AF    ++  G +IT  G    L+Q    G +  +      +++ +AD  GNG + + E
Sbjct: 10  EAFELFDSERTG-FITKEGLQTVLKQF---GVR--VEPAAFNEMFNEADATGNGKIQFPE 63

Query: 368 F 368
           F
Sbjct: 64  F 64

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... Length = 156

 Score = 41.0 bits (97), Expect = 2e-04
 Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 13/97 (13%)

Query: 292 FGMFKCLLRRASLTETDAFA-FLKA----DNDGD-YITYSGFCEALEQLNLTGHKHGLAD 345
           F  F          E   FA +++A    D +G  +I+ +     L  L   G +  L+D
Sbjct: 65  FEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTAL---GER--LSD 119

Query: 346 EETKDLWVQADI--DGNGVVDYKEFQQRIWKTTWSDQ 380
           E+  ++    D+  D  G V Y++F +++    + D+
Sbjct: 120 EDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAGPYPDK 156

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 1f54_A 1f55_A Length = 147

 Score = 39.8 bits (94), Expect = 3e-04
 Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 23/98 (23%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQL--NLTGHKHGLADEETKDLWVQADIDGNGVVDY 365
           +AFA    DN G  I+ S     +  L  + +       + E  DL  + D+DGN  +++
Sbjct: 15  EAFALFDKDNSG-SISASELATVMRSLGLSPS-------EAEVADLMNEIDVDGNHAIEF 66

Query: 366 KEF----QQRIWKTTWSDQRNDLN------DEDEDGFV 393
            EF     +++      D   +L       D++ DG +
Sbjct: 67  SEFLALMSRQLKCN---DSEQELLEAFKVFDKNGDGLI 101

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A Length = 226

 Score = 41.0 bits (96), Expect = 4e-04
 Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 6/78 (7%)

Query: 298 LLRRASLTETDAFAFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDL----W 352
               A + +   F+F   D     +I      + +    L      L D   +D+    +
Sbjct: 114 FHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVAT-LAESGMNLKDTVIEDIIDKTF 172

Query: 353 VQADIDGNGVVDYKEFQQ 370
            +AD   +G +D +E++ 
Sbjct: 173 EEADTKHDGKIDKEEWRS 190

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Length = 191

 Score = 40.0 bits (94), Expect = 5e-04
 Identities = 15/92 (16%), Positives = 36/92 (39%), Gaps = 10/92 (10%)

Query: 311 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 369
            F K D+ GD  +  +    AL      G++  ++++  + L  + D    G + + ++ 
Sbjct: 98  GFRKRDSSGDGRLDSNEVRAALLSS---GYQ--VSEQTFQALMRKFDRQRRGSLGFDDYV 152

Query: 370 QR-IWKTTWSDQ-RNDLNDEDEDGFVKSSLEQ 399
           +  I+     +       D +  G V  + + 
Sbjct: 153 ELSIFVCRVRNVFA--FYDRERTGQVTFTFDT 182

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A Length = 207

 Score = 39.4 bits (92), Expect = 9e-04
 Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 6/82 (7%)

Query: 294 MFKCLLRRASLTETDAFAFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDL- 351
                   A + E   FAF   D     +I      E +  L L   +  L+++  + + 
Sbjct: 99  SLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVAL-LHESELVLSEDMIEVMV 157

Query: 352 ---WVQADIDGNGVVDYKEFQQ 370
              +VQAD   +G +D  E++ 
Sbjct: 158 DKAFVQADRKNDGKIDIDEWKD 179

>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 110

 Score = 37.8 bits (88), Expect = 9e-04
 Identities = 15/59 (25%), Positives = 23/59 (38%), Gaps = 8/59 (13%)

Query: 310 FAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 368
           F  L+ D    +I+ S    A         K  L+  E   +W  +D D +G +   EF
Sbjct: 28  FRSLQPDPSS-FISGS---VAKNFF----TKSKLSIPELSYIWELSDADCDGALTLPEF 78

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	447
3ngq_A	398	CCR4-NOT transcription complex subunit 6-like; alp	99.96
3g6s_A	267	Putative endonuclease/exonuclease/phosphatase fami	99.95
3mpr_A	298	Putative endonuclease/exonuclease/phosphatase FAM	99.95
3l1w_A	257	Uncharacterized protein; APC29019.2, conserved pro	99.95
4gew_A	362	5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosy	99.93
4fva_A	256	5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosy	99.93
3teb_A	266	Endonuclease/exonuclease/phosphatase; PSI-biology,	99.92
4gz1_A	256	Tyrosyl-DNA phosphodiesterase 2; protein-DNA compl	99.92
4f1h_A	250	Tyrosyl-DNA phosphodiesterase 2; hydrolase-DNA com	99.92
4b8c_D	727	Glucose-repressible alcohol dehydrogenase transcr	99.91
3i41_A	317	Beta-hemolysin; beta toxin, sphingomyelinase, toxi	99.91
1zwx_A	301	SMCL, sphingomyelinase-C; dnase1-like fold, beta-h	99.91
2jc4_A	256	Exodeoxyribonuclease III; hydrolase, repair phosph	99.88
1ako_A	268	Exonuclease III; AP-endonuclease, DNA repair; 1.70	99.88
2ddr_A	306	Sphingomyelin phosphodiesterase; DNAse I like fold	99.88
3g91_A	265	MTH0212, exodeoxyribonuclease; double-strand speci	99.86
2jc5_A	259	Exodeoxyribonuclease; hydrolase, repair phosphodie	99.86
2voa_A	257	AF_EXO, XTHA, exodeoxyribonuclease III; EXOIII, AP	99.86
1vyb_A	238	ORF2 contains A reverse transcriptase domain; endo	99.85
2o3h_A	285	DNA-(apurinic or apyrimidinic site) lyase; APE, en	99.83
1hd7_A	318	DNA-(apurinic or apyrimidinic site) lyase; DNA rep	99.83
2j63_A	467	AP-endonuclease; base excision repair, lyase; 2.48	99.83
2a40_B	260	Deoxyribonuclease-1; WAVE, WH2, WAsp, actin, DNAse	99.8
1wdu_A	245	TRAS1 ORF2P; four-layered alpha/beta sandwich, RNA	99.8
2ei9_A	240	Non-LTR retrotransposon R1BMKS ORF2 protein; four	99.71
2f1n_A	262	CDT B, cytolethal distending toxin subunit B; E.co	99.62
1sr4_B	261	CDT B, cytolethal distending toxin protein B; bact	99.57
2imq_X	282	Salivary nitrophorin; ferrous heme, beta-sandwich,	99.49
2lv7_A	100	Calcium-binding protein 7; metal binding protein;	99.49
3n22_A	98	Protein S100-A2; EF-hand, calcium-binding, zinc-bi	99.36
3nso_A	101	Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta	99.36
3i5g_C	159	Myosin catalytic light chain LC-1, mantle muscle;	99.33
2lmt_A	148	Calmodulin-related protein 97A; spermatogenesis, m	99.31
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	99.3
1fi6_A	92	EH domain protein REPS1; EPS15 homology domain, EF	99.29
2lnk_A	113	Protein S100-A4; EF-hand, calcium binding, all alp	99.29
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	99.29
3u0k_A	440	Rcamp; fluorescent protein, calcium binding, EF-ha	99.29
4eto_A	93	Protein S100-A4; calcium-binding protein, EF-hand,	99.28
1wlz_A	105	DJBP, CAP-binding protein complex interacting prot	99.28
2y5i_A	99	S100Z, S100 calcium binding protein Z; metal-bindi	99.27
1qjt_A	99	EH1, epidermal growth factor receptor substrate su	99.27
4drw_A	121	Protein S100-A10/annexin A2 chimeric protein; atyp	99.27
3zwh_A	104	Protein S100-A4; Ca-binding protein-motor protein	99.27
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	99.26
2b1u_A	71	Calmodulin-like protein 5; CLSP, calmodulin-like S	99.26
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	99.26
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	99.26
2wcb_A	95	Protein S100-A12; calcium signalling, HOST-parasit	99.26
1c07_A	95	Protein (epidermal growth factor receptor pathway	99.25
3rm1_A	92	Protein S100-B; alpha-helical, EF hand, metal bind	99.25
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	99.25
1j55_A	95	S-100P protein; metal binding protein; 2.00A {Homo	99.24
3i5g_B	153	Myosin regulatory light chain LC-2, mantle muscle;	99.23
3nxa_A	100	Protein S100-A16; S100 family, calcium binding pro	99.23
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	99.21
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	99.21
2h2k_A	106	Protein S100-A13; calcium binding protein, metal b	99.2
1eh2_A	106	EPS15; calcium binding, signaling domain, NPF bind	99.2
1i9z_A	347	Synaptojanin, phosphatidylinositol phosphate phosp	99.18
1iq3_A	110	Ralbp1-interacting protein (partner of ralbp1); EF	99.18
2lhi_A	176	Calmodulin, serine/threonine-protein phosphatase c	99.18
2jq6_A	139	EH domain-containing protein 1; metal binding prot	99.17
2kgr_A	111	Intersectin-1; structure, alternative splicing, ca	99.17
3li6_A	66	Calcium-binding protein; calcium signaling protein	99.17
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	99.17
2kax_A	92	Protein S100-A5; EF-hand, calcium binding protien,	99.17
1j7q_A	86	CAVP, calcium vector protein; EF-hand family, calc	99.17
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	99.17
2lmt_A	148	Calmodulin-related protein 97A; spermatogenesis, m	99.17
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	99.16
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	99.15
2d58_A	107	Allograft inflammatory factor 1; EF-hand, metal bi	99.14
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	99.14
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	99.14
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	99.13
1k2h_A	93	S100A1, S-100 protein, alpha chain; non-covalent h	99.13
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	99.13
1xk4_C	113	Calgranulin B; S100 family, heterotetramer, metal	99.12
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	99.12
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	99.12
3fwb_A	161	Cell division control protein 31; gene gating, com	99.12
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	99.11
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	99.11
1k9u_A	78	Polcalcin PHL P 7; pollen allergen, calcium-bindin	99.11
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	99.11
1psr_A	100	Psoriasin, S100A7; EF-hand protein, MAD phasing, p	99.11
3u0k_A	440	Rcamp; fluorescent protein, calcium binding, EF-ha	99.1
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	99.1
1a4p_A	96	S100A10; S100 family, EF-hand protein, ligand of a	99.1
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	99.1
2lhi_A	176	Calmodulin, serine/threonine-protein phosphatase c	99.1
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	99.09
1k8u_A	90	S100A6, calcyclin, CACY; calcium regulatory protei	99.09
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	99.09
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	99.08
1xk4_A	93	Calgranulin A; S100 family, heterotetramer, metal	99.08
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	99.07
1cb1_A	78	Calbindin D9K; calcium-binding protein; NMR {Sus s	99.06
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	99.06
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	99.06
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	99.06
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	99.06
1qx2_A	76	Vitamin D-dependent calcium-binding protein, INTE;	99.06
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	99.06
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	99.05
1c7v_A	81	CAVP, calcium vector protein; EF-hand family, calc	99.04
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	99.04
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	99.04
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	99.04
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	99.04
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	99.04
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.03
2jnf_A	158	Troponin C; stretch activated muscle contraction,	99.03
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	99.03
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	99.03
3fwb_A	161	Cell division control protein 31; gene gating, com	99.02
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	99.02
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	99.02
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	99.02
1yx7_A	83	Calsensin, LAN3-6 antigen; calcium-binding protein	99.01
1y1x_A	191	Leishmania major homolog of programmed cell death	99.01
3a8r_A	179	Putative uncharacterized protein; EF-hand, membran	99.01
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	99.0
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	99.0
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	98.99
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	98.99
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	98.99
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	98.99
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	98.98
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	98.98
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	98.98
3i5g_C	159	Myosin catalytic light chain LC-1, mantle muscle;	98.98
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	98.98
1h8b_A	75	ACT-EF34, alpha-actinin 2, skeletal muscle isoform	98.98
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	98.98
2jnf_A	158	Troponin C; stretch activated muscle contraction,	98.97
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	98.97
3fia_A	121	Intersectin-1; EH 1 domain, NESG, structural genom	98.97
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	98.96
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	98.96
1qls_A	99	S100C protein, calgizzarin; metal-binding protein/	98.96
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	98.96
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	98.95
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	98.95
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	98.95
1snl_A	103	Nucleobindin 1, calnuc; EF-hand, calcium-binding,	98.95
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	98.95
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	98.94
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	98.94
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	98.94
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	98.94
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	98.94
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	98.94
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	98.93
2xsw_A	357	72 kDa inositol polyphosphate 5-phosphatase; inosi	98.92
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	98.92
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	98.91
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	98.91
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	98.91
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	98.91
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	98.9
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	98.9
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	98.9
2i7a_A	174	Calpain 13; calcium-dependent cytoplasmic cysteine	98.89
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	98.88
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	98.86
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	98.86
3i5g_B	153	Myosin regulatory light chain LC-2, mantle muscle;	98.86
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	98.85
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	98.85
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	98.85
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	98.85
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	98.84
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	98.84
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	98.84
3cs1_A	219	Flagellar calcium-binding protein; myristoylated,	98.83
1y1x_A	191	Leishmania major homolog of programmed cell death	98.83
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	98.83
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	98.83
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	98.82
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	98.82
3a4u_B	143	Multiple coagulation factor deficiency protein 2;	98.81
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	98.81
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	98.81
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	98.81
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	98.8
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	98.8
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	98.78
2lvv_A	226	Flagellar calcium-binding protein TB-24; EF-hand,	98.78
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	98.78
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	98.78
2l4h_A	214	Calcium and integrin-binding protein 1; metal bind	98.77
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	98.77
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	98.77
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	98.76
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	98.76
2hps_A	186	Coelenterazine-binding protein with bound coelent;	98.75
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	98.75
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	98.75
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	98.74
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	98.73
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	98.73
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	98.71
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	98.71
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	98.71
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	98.7
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	98.7
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	98.7
2lvv_A	226	Flagellar calcium-binding protein TB-24; EF-hand,	98.7
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	98.7
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	98.7
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	98.69
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	98.68
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	98.67
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	98.67
2i7a_A	174	Calpain 13; calcium-dependent cytoplasmic cysteine	98.67
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	98.66
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	98.65
2kld_A	123	Polycystin-2; PC2, PKD2, calcium binding domain, E	98.64
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	98.63
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	98.63
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	98.63
3bow_A	714	Calpain-2 catalytic subunit; cysteine protease, in	98.63
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	98.62
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	98.61
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	98.6
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	98.59
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	98.59
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	98.59
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	98.59
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	98.59
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	98.59
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	98.58
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	98.58
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	98.57
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	98.57
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	98.57
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	98.56
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	98.55
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	98.55
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	98.53
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	98.53
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	98.52
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	98.51
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	98.51
3cs1_A	219	Flagellar calcium-binding protein; myristoylated,	98.5
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	98.49
3bow_A	714	Calpain-2 catalytic subunit; cysteine protease, in	98.49
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	98.48
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	98.47
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	98.47
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	98.44
4a9c_A	316	Phosphatidylinositol-3,4,5-trisphosphate 5-phosph;	98.43
2hps_A	186	Coelenterazine-binding protein with bound coelent;	98.41
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	98.4
3mtc_A	313	Type II inositol-1,4,5-trisphosphate 5-phosphatas;	98.4
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	98.4
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	98.37
1djx_A	624	PLC-D1, phosphoinositide-specific phospholipase C,	98.34
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	98.32
1sjj_A	863	Actinin; 3-helix bundle, calponin homology domain,	98.29
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	98.28
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	98.28
1sra_A	151	Sparc; extracellular matrix protein, calcium-bindi	98.23
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	98.21
2l4h_A	214	Calcium and integrin-binding protein 1; metal bind	98.15
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	98.12
2zkm_X	799	1-phosphatidylinositol-4,5-bisphosphate phosphodie	98.1
3a4u_B	143	Multiple coagulation factor deficiency protein 2;	98.09
1djx_A	624	PLC-D1, phosphoinositide-specific phospholipase C,	98.0
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	97.91
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	97.9
3a8r_A	179	Putative uncharacterized protein; EF-hand, membran	97.9
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	97.89
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	97.87
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	97.85
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	97.84
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	97.8
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	97.74
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	97.73
1eg3_A	261	Dystrophin; EF-hand like domain, WW domain, struct	97.69
1nub_A	229	Basement membrane protein BM-40; extracellular mod	97.68
1eg3_A	261	Dystrophin; EF-hand like domain, WW domain, struct	97.54
2zkm_X	799	1-phosphatidylinositol-4,5-bisphosphate phosphodie	97.53
3ohm_B	885	1-phosphatidylinositol-4,5-bisphosphate phosphodi	97.52
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	97.41
1sjj_A	863	Actinin; 3-helix bundle, calponin homology domain,	97.27
1tuz_A	118	Diacylglycerol kinase alpha; transferase, HR532, n	97.23
3qr0_A	816	Phospholipase C-beta (PLC-beta); PH domain, EF han	97.02
3ohm_B	885	1-phosphatidylinositol-4,5-bisphosphate phosphodi	96.84
3qr0_A	816	Phospholipase C-beta (PLC-beta); PH domain, EF han	96.56
2qpt_A	550	EH domain-containing protein-2; protein-nucleotide	96.06
4drw_A	121	Protein S100-A10/annexin A2 chimeric protein; atyp	95.63
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	95.54
2kld_A	123	Polycystin-2; PC2, PKD2, calcium binding domain, E	95.49
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	94.9
2lv7_A	100	Calcium-binding protein 7; metal binding protein;	94.88
3li6_A	66	Calcium-binding protein; calcium signaling protein	94.81
1c07_A	95	Protein (epidermal growth factor receptor pathway	94.22
2b1u_A	71	Calmodulin-like protein 5; CLSP, calmodulin-like S	93.98
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	93.96
1iq3_A	110	Ralbp1-interacting protein (partner of ralbp1); EF	93.65
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	93.58
1xk4_C	113	Calgranulin B; S100 family, heterotetramer, metal	93.5
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	93.47
1fi6_A	92	EH domain protein REPS1; EPS15 homology domain, EF	93.16
2kgr_A	111	Intersectin-1; structure, alternative splicing, ca	93.13
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	93.03
1yx7_A	83	Calsensin, LAN3-6 antigen; calcium-binding protein	92.89
1k9u_A	78	Polcalcin PHL P 7; pollen allergen, calcium-bindin	92.84
1wlz_A	105	DJBP, CAP-binding protein complex interacting prot	92.62
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	92.55
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	92.42
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	92.18
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	92.01
1qx2_A	76	Vitamin D-dependent calcium-binding protein, INTE;	92.0
1c7v_A	81	CAVP, calcium vector protein; EF-hand family, calc	91.72
3rm1_A	92	Protein S100-B; alpha-helical, EF hand, metal bind	91.32
4eto_A	93	Protein S100-A4; calcium-binding protein, EF-hand,	91.11
3n22_A	98	Protein S100-A2; EF-hand, calcium-binding, zinc-bi	90.98
3zwh_A	104	Protein S100-A4; Ca-binding protein-motor protein	90.85
3nxa_A	100	Protein S100-A16; S100 family, calcium binding pro	90.74
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	90.53
1j7q_A	86	CAVP, calcium vector protein; EF-hand family, calc	89.95
3nso_A	101	Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta	89.74
1snl_A	103	Nucleobindin 1, calnuc; EF-hand, calcium-binding,	89.47
1cb1_A	78	Calbindin D9K; calcium-binding protein; NMR {Sus s	89.41
2jq6_A	139	EH domain-containing protein 1; metal binding prot	89.05
1k2h_A	93	S100A1, S-100 protein, alpha chain; non-covalent h	88.9
1xk4_A	93	Calgranulin A; S100 family, heterotetramer, metal	88.8
2d58_A	107	Allograft inflammatory factor 1; EF-hand, metal bi	88.63
2l5y_A	150	Stromal interaction molecule 2; EF-hand, SAM domai	88.61
1qjt_A	99	EH1, epidermal growth factor receptor substrate su	88.42
1a4p_A	96	S100A10; S100 family, EF-hand protein, ligand of a	88.42
2kax_A	92	Protein S100-A5; EF-hand, calcium binding protien,	88.19
1qls_A	99	S100C protein, calgizzarin; metal-binding protein/	87.98
1eh2_A	106	EPS15; calcium binding, signaling domain, NPF bind	87.93
1j55_A	95	S-100P protein; metal binding protein; 2.00A {Homo	87.82
1wlm_A	151	Protein CGI-38; structural genomics, NPPSFA, natio	87.46
2wcb_A	95	Protein S100-A12; calcium signalling, HOST-parasit	87.12
2h2k_A	106	Protein S100-A13; calcium binding protein, metal b	87.11
2y5i_A	99	S100Z, S100 calcium binding protein Z; metal-bindi	87.02
2lnk_A	113	Protein S100-A4; EF-hand, calcium binding, all alp	87.02
1pul_A	125	Hypothetical protein C32E8.3 in chromosome I; alph	87.01
1tuz_A	118	Diacylglycerol kinase alpha; transferase, HR532, n	86.85
4fl4_A	88	Glycoside hydrolase family 9; structural genomics,	86.35
1k8u_A	90	S100A6, calcyclin, CACY; calcium regulatory protei	86.3
1psr_A	100	Psoriasin, S100A7; EF-hand protein, MAD phasing, p	86.05
1sra_A	151	Sparc; extracellular matrix protein, calcium-bindi	86.04
2jrf_A	184	Tubulin polymerization-promoting protein family me	85.26
4dh2_B	82	Dockerin type 1; cellulosome, cohesin, type I cohe	83.63
3fia_A	121	Intersectin-1; EH 1 domain, NESG, structural genom	83.13
2kav_A	129	Sodium channel protein type 2 subunit alpha; volta	80.59
2k60_A	150	Protein (stromal interaction molecule 1); EF-hand,	80.5

>3ngq_A CCR4-NOT transcription complex subunit 6-like; alpha/beta sandwich fold, hydrolase; HET: 1PS; 1.80A {Homo sapiens} PDB: 3ngo_A 3ngn_A

Probab=99.96  E-value=7.4e-30  Score=251.16  Aligned_cols=200  Identities=21%  Similarity=0.343  Sum_probs=144.1

Q ss_pred             CceeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhhhcCCcE
Q 013259           28 PCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVN  107 (447)
Q Consensus        28 ~~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~  107 (447)
                      ..||||||||+++.|+....+ ++|  +.....|..|...|+++|...+|||||||||+  ..++.+.+...|..+||..
T Consensus        30 ~~~~V~syNIl~d~~~~~~~~-~~~--p~~~~~W~~R~~~i~~~i~~~~pDIi~lQEv~--~~q~~~~l~~~L~~~gY~~  104 (398)
T 3ngq_A           30 ASFTVMCYNVLCDKYATRQLY-GYC--PSWALNWEYRKKGIMEEIVNCDADIISLQEVE--TEQYFTLFLPALKERGYDG  104 (398)
T ss_dssp             EEEEEEEEECCCGGGCCTTTC-TTS--CHHHHSHHHHHHHHHHHHHHHCCSEEEEEEEE--HHHHHHTHHHHHHHTTEEE
T ss_pred             CCEEEEEEccCcCcCCccccc-cCC--ChhhcCHHHHHHHHHHHHHhcCCCEEEEeccc--HHHHHHHHHHHHHhCCceE
Confidence            479999999999888765432 344  23567899999999999999999999999994  2344456677788899998


Q ss_pred             EEecCCC---------CCCceEEEEEecCCceEeeeEEEEecCCCCc-----------------hhhhhhhccccccccc
Q 013259          108 FKLARTN---------NRGDGLLTAVHKDYFRVVNYRDLLFNDFGDR-----------------VAQLLHVELIDPFSQC  161 (447)
Q Consensus       108 ~~~~~~~---------~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~-----------------~~~~~~l~~~~~~~~~  161 (447)
                      ++..+..         ..+.|+|||||+.+|++++...++|++.+..                 ++....++........
T Consensus       105 v~~~k~r~~~~~~~~~~~~eG~AIfyr~~~f~ll~~~~i~ls~~~~~~s~~~~~~~~Ri~t~~nval~~~L~~~~~~~~~  184 (398)
T 3ngq_A          105 FFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQVAMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGA  184 (398)
T ss_dssp             EEEESCTTSCCCHHHHHTCEEEEEEEETTTEEEEEEEEEEHHHHHHHTCTTCHHHHHTTTTCCCEEEEEEEEECGGGC--
T ss_pred             EEecCCCccccccccccCcceeEEEEECCcceEEeeeEEecCCCcccccccchhhhcceeeccceeEEEEEEEccccccc
Confidence            8764432         3568999999999999999999999764321                 1111111110000000


Q ss_pred             c----cCCCCCeEEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHHHcC---------CCCCcEEEeecCCCccCCch
Q 013259          162 R----NGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHN---------LKPIPIILCGDWNGSKRGHV  228 (447)
Q Consensus       162 ~----~~~~g~~l~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~~---------~~~~pvIl~GDFN~~p~s~~  228 (447)
                      .    ....++.|.|+||||.+.+  .....|+.|+..|++.++++.++..         ....|+|||||||+.|++.+
T Consensus       185 ~~~~~~~~~~~~l~V~nTHL~~~p--~~~~vRl~Q~~~Ll~~l~~~~~~~~~~~~~~~~~~~~~PvIl~GDFNs~P~s~v  262 (398)
T 3ngq_A          185 GMKPIHAADKQLLIVANAHMHWDP--EYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGV  262 (398)
T ss_dssp             ---------CCEEEEEEEECCCCT--TCHHHHHHHHHHHHHHHHHHHCC-------------CCCEEEEEECSCCTTSHH
T ss_pred             ccccccCCCCcEEEEEEeCcCCCC--CCHHHHHHHHHHHHHHHHHHHHHhhcccccccccCCCCceEEEeeCCCCCCCHH
Confidence            0    0124678999999999854  4567899999999999998764321         14579999999999999999


Q ss_pred             hHhhhh
Q 013259          229 YKFLRS  234 (447)
Q Consensus       229 ~~~l~~  234 (447)
                      |+.|..
T Consensus       263 y~~L~~  268 (398)
T 3ngq_A          263 VEYLSN  268 (398)
T ss_dssp             HHHHHH
T ss_pred             HHHHhc
Confidence            999864

>3g6s_A Putative endonuclease/exonuclease/phosphatase family protein; alpha-beta protein, structural genomics, PSI-2; 2.50A {Bacteroides vulgatus atcc 8482}

Probab=99.95  E-value=3e-28  Score=229.43  Aligned_cols=222  Identities=17%  Similarity=0.239  Sum_probs=154.1

Q ss_pred             CceeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhhhcCCcE
Q 013259           28 PCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVN  107 (447)
Q Consensus        28 ~~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~  107 (447)
                      .+||||||||++..            ..++...|..|...|++.|.+.+|||||||||.  . .....+...|  .+|.+
T Consensus         2 ~~l~v~t~Ni~~~~------------~~~~~~~~~~r~~~i~~~i~~~~~DIv~LQEv~--~-~~~~~l~~~l--~~y~~   64 (267)
T 3g6s_A            2 TDVRWATFNIRYDN------------PQDSLNNWQYRKDRVCQFIKDHELDIVGMQEVL--H-NQFQDLRAGL--PEYDG   64 (267)
T ss_dssp             EEEEEEEEECCCCC------------GGGGGGSGGGTHHHHHHHHHHTTCSEEEEESBC--H-HHHHHHHHHC--TTEEE
T ss_pred             CcEEEEEEEeccCC------------CCccccCHHHHHHHHHHHHHHcCCCEEEEecCC--H-HHHHHHHHhc--cCCcE
Confidence            36999999999641            123355788999999999999999999999994  2 2234445444  36776


Q ss_pred             EEecCCC--CCCceEEEEEecCCceEeeeEEEEecCCCCchh-hhhhhcccccc--cccccCCCCCeEEEEEecccCCCC
Q 013259          108 FKLARTN--NRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVA-QLLHVELIDPF--SQCRNGDLRQEILIVNTHLLFPHD  182 (447)
Q Consensus       108 ~~~~~~~--~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~-~~~~l~~~~~~--~~~~~~~~g~~l~v~n~HL~~~~~  182 (447)
                      +...+..  ..+.+++|+||+++++++....+.++..+.... ..+.....+..  ........+..+.|+|+||.+.  
T Consensus        65 ~~~~~~~~~~~g~~~ail~~~s~~~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~v~~~Hl~~~--  142 (267)
T 3g6s_A           65 IGVGRDDGKTAGEYAPLFYRKDKYEVLDSNTFWLAENPDSVGMMGWDAVCVRIATWAKFKDKATGKIFMAVNTHFDHV--  142 (267)
T ss_dssp             ECCCTTTSSSSSCBCCEEEETTTEEEEEEEEEESSSCTTSTTCCCTTCSSCCEEEEEEEEETTTCCEEEEEEEECCSS--
T ss_pred             EEecCCCCCcCCceeEEEEEccceEEEecccEecCCCCCccccccccccCcceEEEEEEEEcCCCCEEEEEEeCCCCC--
Confidence            6544432  244569999997779999999988876543222 00000000111  1122224678999999999653  


Q ss_pred             CCCchhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCCchhHhhhhCC--CcccccccccCCCCCCCceeeccc
Q 013259          183 SSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQG--FVSSYDTAHQYTDADAHKWVSHRN  260 (447)
Q Consensus       183 ~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~g--~~d~~~~~~~~~~~~~~tw~~~~~  260 (447)
                        ....|..|+..+.+.+.++.     .+.|+|||||||+.|.+..++.|...|  +.|+|...... .....||+...+
T Consensus       143 --~~~~R~~q~~~l~~~l~~~~-----~~~pvIl~GDfN~~~~~~~~~~l~~~~~~l~d~~~~~~~~-~~~~~T~~~~~~  214 (267)
T 3g6s_A          143 --GEEARRQSALLIIRKIKEIV-----GERPAVVTGDFNVTDASDAYETITTNEFVMKDAYKTAARV-TGVDYTFHDFAR  214 (267)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHT-----TTSCEEEEEECSSCTTSHHHHHHHSSSSCCEEHHHHCSEE-EECSCSBCTTTT
T ss_pred             --CHHHHHHHHHHHHHHHHHhc-----CCCCEEEEeECCCCCCCHHHHHhhcCCcchhhhHhhhccc-cCCCCCEeCCCC
Confidence              35679999999988888753     367999999999999999999998876  99999876531 122457766543


Q ss_pred             C-CCccccccceeccCc
Q 013259          261 H-RGNICGVDFIWLLNP  276 (447)
Q Consensus       261 ~-~~~~~rIDyI~~~~~  276 (447)
                      . .....||||||+++.
T Consensus       215 ~~~~~~~riD~I~~s~~  231 (267)
T 3g6s_A          215 IPAEDCEKIDFIFVTPQ  231 (267)
T ss_dssp             SCGGGCCCCEEEEECTT
T ss_pred             CCCCCCCcEeEEEeCCC
Confidence            2 122468999999764

>3mpr_A Putative endonuclease/exonuclease/phosphatase FAM protein; structural genomics, PSI-2, protein structure initiative; HET: MSE PEG; 1.90A {Bacteroides thetaiotaomicron}

Probab=99.95  E-value=2.2e-28  Score=234.47  Aligned_cols=227  Identities=19%  Similarity=0.268  Sum_probs=153.8

Q ss_pred             CCceeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhhhcCCc
Q 013259           27 QPCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYV  106 (447)
Q Consensus        27 ~~~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~  106 (447)
                      +.+||||||||++..     .     ........|..|...|++.|.+.+|||||||||.  . .....+...|.  +|.
T Consensus         4 ~~~lrV~t~Ni~~~~-----~-----~~~~~~~~w~~r~~~i~~~i~~~~~DIv~LQEv~--~-~~~~~l~~~l~--~y~   68 (298)
T 3mpr_A            4 PTSLTVASYNLRNAN-----G-----SDSARGDGWGQRYPVIAQMVQYHDFDIFGTQECF--L-HQLKDMKEALP--GYD   68 (298)
T ss_dssp             CEEEEEEEEECCCCC-----H-----HHHHHTCCHHHHHHHHHHHHHHTTCSEEEEESBC--H-HHHHHHHHHST--TEE
T ss_pred             CCcEEEEEEEeccCC-----C-----CCcccccCHHHHHHHHHHHHHHcCCCEEEEeCCC--H-HHHHHHHHhCC--CCc
Confidence            357999999998631     0     0001145799999999999999999999999994  2 23444555553  566


Q ss_pred             EEEecCCC--CCCceEEEEEecCCceEeeeEEEEecCCCCchhhhhhhccccc--ccccccCCCCCeEEEEEecccCCCC
Q 013259          107 NFKLARTN--NRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDP--FSQCRNGDLRQEILIVNTHLLFPHD  182 (447)
Q Consensus       107 ~~~~~~~~--~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~g~~l~v~n~HL~~~~~  182 (447)
                      ++...+..  ..+.++||+||+++||++....+.++..+............+.  ........+++.|.|+|+||.+   
T Consensus        69 ~~~~~~~~g~~~g~~~aily~~sr~~i~~~~~~~l~~~p~~~~~~~~~~~~R~~~~~~~~~~~~g~~~~v~~~Hl~~---  145 (298)
T 3mpr_A           69 YIGVGRDDGKDKGEHSAIFYRTDKFDIVEKGDFWLSETPDVPSKGWDAVLPRICSWGHFKCKDTGFEFLFFNLHMDH---  145 (298)
T ss_dssp             EECCCTTTSSSSSCBCCEEEETTTEEEEEEEEEESSSSTTSSCCCTTCSSCCEEEEEEEEETTTCCEEEEEEEECCS---
T ss_pred             EEEEecCCCCCCCceeEEEEecCceEEEeccEEEccCCCCccCcccccccCceeEEEEEEEcCCCCEEEEEEecCCC---
Confidence            65544432  2455699999988899999999988765432221000000011  1112222568899999999954   


Q ss_pred             CCCchhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCCchhHhhhhCC-CcccccccccCCCCCCCceeecccC
Q 013259          183 SSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQG-FVSSYDTAHQYTDADAHKWVSHRNH  261 (447)
Q Consensus       183 ~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~g-~~d~~~~~~~~~~~~~~tw~~~~~~  261 (447)
                       .....|..|+..+.+.+.++...   .+.|+|||||||+.|.+..++.|...| +.|+|....... ....||+.....
T Consensus       146 -~~~~~R~~q~~~l~~~i~~~~~~---~~~pvIl~GDfN~~~~~~~~~~l~~~g~l~D~~~~~~~~~-~~~~T~~~~~~~  220 (298)
T 3mpr_A          146 -IGKKARVESAFLVQEKMKELGRG---KNLPAILTGDFNVDQTHQSYDAFVSKGVLCDSYEKCDYRY-ALNGTFNNFDPN  220 (298)
T ss_dssp             -SCHHHHHHHHHHHHHHHHHTTTT---SCCCEEEEEECSSCTTSHHHHHHHTTSSSEEHHHHCSEEE-CSSCSBCTTCTT
T ss_pred             -CCHHHHHHHHHHHHHHHHHHhcC---CCCcEEEEEeCCCCCCCHHHHHHhcCCcchhhHhhhcccC-CCCCCccCCCCC
Confidence             34577999999998888774311   367999999999999999999998876 899987765311 123566554422


Q ss_pred             CCccccccceeccCc
Q 013259          262 RGNICGVDFIWLLNP  276 (447)
Q Consensus       262 ~~~~~rIDyI~~~~~  276 (447)
                      .....+|||||+++.
T Consensus       221 ~~~~~rID~Il~s~~  235 (298)
T 3mpr_A          221 SFTESRIDHIFVSPS  235 (298)
T ss_dssp             CCCSCCCEEEEECTT
T ss_pred             CCCCceEEEEEeCCC
Confidence            123568999999864

>3l1w_A Uncharacterized protein; APC29019.2, conserved protein, enterococcus faecalis V583, PSI-2, MCSG, structural genomics; 1.60A {Enterococcus faecalis}

Probab=99.95  E-value=3.6e-27  Score=220.70  Aligned_cols=214  Identities=16%  Similarity=0.274  Sum_probs=148.0

Q ss_pred             eeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhhhcCCcEEE
Q 013259           30 ITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFK  109 (447)
Q Consensus        30 lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~~  109 (447)
                      ||||||||++..            ..+....|..|...|++.|...+|||||||||.  . .....+...   .||.++.
T Consensus         1 lrv~t~Ni~~~~------------~~~~~~~w~~r~~~i~~~i~~~~~DIv~LQEv~--~-~~~~~l~~~---l~y~~~~   62 (257)
T 3l1w_A            1 MKIATYNVRVDT------------EYDQDWQWSFRKEAVCQLINFHDWSLCCIQEVR--P-NQVRDLKAY---TTFTCLS   62 (257)
T ss_dssp             CEEEEEECCCCC------------GGGGGGSHHHHHHHHHHHHHHHCCSEEEEEEEC--H-HHHHHHHHH---SSSEEEE
T ss_pred             CEEEEEEeccCC------------CCccccChHHHHHHHHHHHHHcCCCEEEEeCCC--H-HHHHHHHhc---CCCcEEE
Confidence            699999999641            123456799999999999999999999999994  2 222333332   4888776


Q ss_pred             ecCCC-CCCceEEEEEecCCceEeeeEEEEecCCCCchhhhhhhcccccc--cccccCCCCCeEEEEEecccCCCCCCCc
Q 013259          110 LARTN-NRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPF--SQCRNGDLRQEILIVNTHLLFPHDSSLS  186 (447)
Q Consensus       110 ~~~~~-~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~g~~l~v~n~HL~~~~~~~~~  186 (447)
                      ..+.. ..+.|+||++|+.+|+++....+.++..++...........+..  .......++..+.|+|+||.+.    ..
T Consensus        63 ~~~~~~~~~~g~ail~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~v~~~Hl~~~----~~  138 (257)
T 3l1w_A           63 AEREGDGQGEGLAILYNEQKVQAIDTGYFWLSETPQQPSIHPEAGCPRIALWGLFKETTQNTPFLVINVHLDHI----SA  138 (257)
T ss_dssp             EESSSSSCSCEEEEEECTTTEEEEEEEEEESSSSTTSSCCCTTCSSCCEEEEEEEEETTCSSCEEEEEEECCSS----CH
T ss_pred             ecccCCCCCceEEEEEEcceEEEEecCeEECcCCCCcccccccccccceeEEEEEEEcCCCCEEEEEEeCCCCC----CH
Confidence            55543 46789999999888999999999887544322110000000111  1122223578999999999653    34


Q ss_pred             hhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCCchhHhhhhCCCcccccccccCCCCCCCceeecccCC--Cc
Q 013259          187 LVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRNHR--GN  264 (447)
Q Consensus       187 ~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~g~~d~~~~~~~~~~~~~~tw~~~~~~~--~~  264 (447)
                      ..|..|+..+.+.+.+...    .+ |+|||||||+.|.+..++.|. .++.|+|...+..  ....||+.+.+..  ..
T Consensus       139 ~~r~~q~~~l~~~i~~~~~----~~-pvil~GDfN~~~~~~~~~~l~-~~l~d~~~~~~~~--~~~~t~~~~~~~~~~~~  210 (257)
T 3l1w_A          139 HARLAGMTVILEELHDKIA----QY-PTLLMGDFNAESGEEVHQLVQ-KKFQDSKNLATHY--GPRGTFQNFTYTKPWAE  210 (257)
T ss_dssp             HHHHHHHHHHHHHTHHHHH----HS-CEEEEEECCCCTTSHHHHHHT-TTCEEGGGTSEEE--SCSCCBCTTCTTCCGGG
T ss_pred             HHHHHHHHHHHHHHHHHcC----CC-CEEEEeeCCCCCCcHHHHHhh-hhccchhhhhccc--CCCCcccCCcccCCCCC
Confidence            6799999999998884332    23 999999999999999999884 4899998876543  2345665543211  12


Q ss_pred             cccccceec
Q 013259          265 ICGVDFIWL  273 (447)
Q Consensus       265 ~~rIDyI~~  273 (447)
                      ..||||||+
T Consensus       211 ~~riD~i~~  219 (257)
T 3l1w_A          211 LEEIDYIYV  219 (257)
T ss_dssp             CBCCEEEEE
T ss_pred             CCceeEEEE
Confidence            368999998

>4gew_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; 2.35A {Caenorhabditis elegans} PDB: 4f1i_A

Probab=99.93  E-value=1.4e-25  Score=220.17  Aligned_cols=214  Identities=15%  Similarity=0.107  Sum_probs=142.6

Q ss_pred             cccCCCCceeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhh
Q 013259           22 RDHQQQPCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLS  101 (447)
Q Consensus        22 ~~~~~~~~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~  101 (447)
                      .+...+..||||||||++.     +           ...+..|...|+++|++.+|||||||||...   ....+...+.
T Consensus       112 ~~~~~~~~lkVlSWNI~Gl-----~-----------~~~~~~R~~~I~~~I~~~~PDIV~LQEv~~~---~~~~l~~~~~  172 (362)
T 4gew_A          112 AEDLKGFEVSVMSWNIDGL-----D-----------GRSLLTRMKAVAHIVKNVNPDILFLQEVVDR---DLAPIDKLQS  172 (362)
T ss_dssp             -CTTTTCEEEEEEEECCTT-----C-----------CTTHHHHHHHHHHHHHHHCCSEEEEEEECST---TCHHHHGGGG
T ss_pred             CCCCCCCeEEEEEEEeCCC-----C-----------CcCHHHHHHHHHHHHHHcCCCEEEEEcCChh---HhHHHHHhcC
Confidence            4445566799999999853     1           1236679999999999999999999999532   2233444332


Q ss_pred             hcCCcEEEecCCCCCCceEEEEEecCCceEeeeEEEEecCCCCchhhhhhhcccccccccccCCCCCeEEEEEecccCCC
Q 013259          102 DAGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPH  181 (447)
Q Consensus       102 ~~gy~~~~~~~~~~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~v~n~HL~~~~  181 (447)
                        +|.+++.  ....+.|+||++|++ +++.....+.++........          ..+.+...|..|.|+|+||.++.
T Consensus       173 --~y~~~~~--~~~~~~G~aIlsk~~-i~~~~~~~~~~~~~~~~r~~----------l~~~i~~~g~~l~v~ntHL~s~~  237 (362)
T 4gew_A          173 --LYKIYYS--NKGCQYYTAILVSKM-FDVEKHDVIHFQNSGMYRTL----------QILEGSIGGLKVFLLNTHLESTR  237 (362)
T ss_dssp             --TEEEEES--STTSSSEEEEEEETT-EEEEEEEEEECTTCSSCCEE----------EEEEEEETTEEEEEEEEECCCSG
T ss_pred             --CceEEeC--CCCCCceEEEEEecc-CccccccccCCCCCcccceE----------EEEEEEECCEEEEEEEecCCccc
Confidence              4555443  345567999998877 77777666665543211110          01233346789999999997643


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCCchhHhhhhCCCcccccccccCCCCCCCceeecccC
Q 013259          182 DSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRNH  261 (447)
Q Consensus       182 ~~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~g~~d~~~~~~~~~~~~~~tw~~~~~~  261 (447)
                        .....|..|+..+...+..+...  ..+.|+|||||||..|.+...   ...|+.|+|...+... ....||....+.
T Consensus       238 --~~~~~R~~Q~~~l~~~~~~~~~~--~~~~pvIl~GDFN~~p~~~~~---~~~gl~Da~~~~~~~~-~~~~Tw~~~~n~  309 (362)
T 4gew_A          238 --EHRPQRCAQFGFCMDKVREIIAQ--NPGALVFFGGDLNLRDEEVSR---VPDGVKDAWEAAGSDN-KTKFTWDTFKND  309 (362)
T ss_dssp             --GGHHHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECCCCGGGCCC---CCTTCEEHHHHTTCCG-GGCCSEETTTCT
T ss_pred             --cchhHHHHHHHHHHHHhHhhhhc--CCCCCeEEeecCCCCCcccch---hcchHHHHHHHhCCCC-CCCcCcccccCc
Confidence              23456888999888887776543  267899999999998876432   2458999998875432 234567544321


Q ss_pred             -----CCccccccceeccCcc
Q 013259          262 -----RGNICGVDFIWLLNPN  277 (447)
Q Consensus       262 -----~~~~~rIDyI~~~~~~  277 (447)
                           .+...||||||+++..
T Consensus       310 ~~~~~~~~~~RIDyIf~s~~l  330 (362)
T 4gew_A          310 NKQGFHGAKMRFDRLYWSGPL  330 (362)
T ss_dssp             TSCCSSCCEECCEEEEEESSC
T ss_pred             ccccCCCCCcceEEEEEcCCc
Confidence                 1224589999998653

>4fva_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; HET: EDO; 2.07A {Caenorhabditis elegans}

Probab=99.93  E-value=3e-25  Score=206.60  Aligned_cols=211  Identities=15%  Similarity=0.113  Sum_probs=139.6

Q ss_pred             CCCCceeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhhhcC
Q 013259           25 QQQPCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAG  104 (447)
Q Consensus        25 ~~~~~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~g  104 (447)
                      ....+||||||||++.     .           ...|..|.+.|+++|++.+|||||||||...  . ...+...+   +
T Consensus         9 ~~~~~l~v~s~Ni~g~-----~-----------~~~~~~r~~~i~~~i~~~~pDIi~LQEv~~~--~-~~~l~~~~---~   66 (256)
T 4fva_A            9 LKGFEVSVMSWNIDGL-----D-----------GRSLLTRMKAVAHIVKNVNPDILFLQEVVDR--D-LAPIDKLQ---S   66 (256)
T ss_dssp             CTTCEEEEEEEECCTT-----C-----------CTTHHHHHHHHHHHHHHHCCSEEEEEEECST--T-CHHHHGGG---G
T ss_pred             CCCCEEEEEEEecCCC-----C-----------CcCHHHHHHHHHHHHHHcCCCEEEEEecChh--H-hHHHHHhc---C
Confidence            3445799999999852     1           1246789999999999999999999999532  2 23333322   3


Q ss_pred             CcEEEecCCCCCCceEEEEEecCCceEeeeEEEEecCCCCchhhhhhhcccccccccccCCCCCeEEEEEecccCCCCCC
Q 013259          105 YVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSS  184 (447)
Q Consensus       105 y~~~~~~~~~~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~v~n~HL~~~~~~~  184 (447)
                      |.+++ ........|++|+++++ +++.....+.++........          ..+.+...+..+.|+|+||.++.  .
T Consensus        67 ~~~~~-~~~~~~~~g~~il~~~~-~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~g~~~~v~~~Hl~~~~--~  132 (256)
T 4fva_A           67 LYKIY-YSNKGCQYYTAILVSKM-FDVEKHDVIHFQNSGMYRTL----------QILEGSIGGLKVFLLNTHLESTR--E  132 (256)
T ss_dssp             TEEEE-ESSTTSSSEEEEEEETT-CEEEEEEEEECTTCSSCCEE----------EEEEEEETTEEEEEEEEECCCSG--G
T ss_pred             CceEe-ecCCCCCcceEEEEeec-ccceecccccCCCCccccee----------EEEEEEeCCeEEEEEEecCCCCC--c
Confidence            33332 23445667999999888 88887777776654321111          11233346789999999997643  2


Q ss_pred             CchhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCCchhHhhhhCCCcccccccccCCCCCCCceeecccC---
Q 013259          185 LSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRNH---  261 (447)
Q Consensus       185 ~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~g~~d~~~~~~~~~~~~~~tw~~~~~~---  261 (447)
                      ....|..|+..+.+.+.......  .+.|+|||||||..+.+....   ..++.|+|...+... ....||....+.   
T Consensus       133 ~~~~~~~q~~~~~~~~~~~~~~~--~~~~vIl~GDfN~~~~~~~~~---~~~~~d~~~~~~~~~-~~~~T~~~~~~~~~~  206 (256)
T 4fva_A          133 HRPQRCAQFGFCMDKVREIIAQN--PGALVFFGGDLNLRDEEVSRV---PDGVKDAWEAAGSDN-KTKFTWDTFKNDNKQ  206 (256)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECCCCGGGCCCC---CTTCEEHHHHTTCCG-GGCCSEETTTCCSSC
T ss_pred             chHHHHHHHHHHHHHhhhhhhcc--CCCcEEEeccCCCCcchhhhh---hcchhhHHHHhCCCC-CCCcccccccCcccc
Confidence            34557788888887777665542  678999999999987654432   357888887765432 234566543321   


Q ss_pred             --CCccccccceeccCcc
Q 013259          262 --RGNICGVDFIWLLNPN  277 (447)
Q Consensus       262 --~~~~~rIDyI~~~~~~  277 (447)
                        .+...||||||+++..
T Consensus       207 ~~~~~~~RiD~I~~~~~~  224 (256)
T 4fva_A          207 GFHGAKMRFDRLYWSGPL  224 (256)
T ss_dssp             SCCSCEECCEEEEEESSC
T ss_pred             cCCCCCcCeEEEEEcCCc
Confidence              1223589999997653

>3teb_A Endonuclease/exonuclease/phosphatase; PSI-biology, MCSG, midwest center for structural genomics; 2.99A {Leptotrichia buccalis c-1013-b}

Probab=99.92  E-value=3.3e-25  Score=208.06  Aligned_cols=213  Identities=14%  Similarity=0.086  Sum_probs=140.3

Q ss_pred             CceeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcEEEEcccccChh-----------hHHHHH
Q 013259           28 PCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNE-----------ELVDMY   96 (447)
Q Consensus        28 ~~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DII~LQEv~~~~~-----------~~~~~l   96 (447)
                      .+||||||||++..                ...+..+...|++.|.+.+|||||||||.....           .+...+
T Consensus         2 ~~l~v~t~Ni~~~~----------------~~~~~~~~~~i~~~i~~~~~DIi~LQEv~~~~~~~~~~~~~~~d~~~~~~   65 (266)
T 3teb_A            2 NAMKILTVNVHAWL----------------EENQMEKIDILARTIAEKQYDVIAMQEVNQLMNNKIIFDDIREENYAWVL   65 (266)
T ss_dssp             -CEEEEEEECCTTC----------------STTHHHHHHHHHHHHHHHTCSEEEEEEEEEETTSCEEETTEETTCHHHHH
T ss_pred             CceEEEEEeccccc----------------CcchhHHHHHHHHHHHhcCCCEEEEEEccccccccccccccccccHHHHH
Confidence            46999999998531                113456889999999999999999999952221           233334


Q ss_pred             HHHhhhcC---CcEEEe---cCCCCCCceEEEEEecCCceEeeeEEEEecCCCCchhhhhhhcccccccccccCCCCCeE
Q 013259           97 EKRLSDAG---YVNFKL---ARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEI  170 (447)
Q Consensus        97 ~~~l~~~g---y~~~~~---~~~~~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~l  170 (447)
                      ...|...+   |.+++.   ........|+||+  ++ +|++....+.++..+.......     ..+..+.+...+..+
T Consensus        66 ~~~l~~~~~~~y~~~~~~~~~~~~~~~~g~ail--sr-~~~~~~~~~~~~~~~~~~~~~~-----r~~~~~~~~~~~~~~  137 (266)
T 3teb_A           66 LETLQKYTDTDYYLHWSNSHIGFGKYNEGVAVI--TR-HKIKAEDEFYCTFAQSVRTISA-----RRIVSITINYEGQDI  137 (266)
T ss_dssp             HHHHTTTCCSCCEEEEEEEEECSTTEEEEEEEE--ES-SCCSEEEEEECSSCCCTTCTTC-----CEEEEEEEEETTEEE
T ss_pred             HHHHHHhCCCCeEEEEeccccCccccCCeEEEE--EC-ceecCceeEEeCCCCCCCCccc-----ceEEEEEEEeCCeEE
Confidence            55555544   765422   1123344699999  77 8998888888876432221100     111123334467899


Q ss_pred             EEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCcc--CCchhHhhhhCCCcccccccccCC
Q 013259          171 LIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSK--RGHVYKFLRSQGFVSSYDTAHQYT  248 (447)
Q Consensus       171 ~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p--~s~~~~~l~~~g~~d~~~~~~~~~  248 (447)
                      .|+|+||.+...  ....|..|+..+.+.+..        +.|+|||||||+.|  .+..++.|...|+.|+|...+...
T Consensus       138 ~v~~~Hl~~~~~--~~~~r~~q~~~l~~~~~~--------~~~~il~GDfN~~~~~~~~~~~~l~~~~l~d~~~~~~~~~  207 (266)
T 3teb_A          138 EFYSCHMNLPNC--ETEDMGKNIQTILNRTQN--------SNLKILMGDFNTDAIGNVAAYENILSQGLFDTYVMAEKKD  207 (266)
T ss_dssp             EEEEEECCCTTC--TTCCHHHHHHHHHTSSCS--------CCEEEEEEECCCCTTTCHHHHHHHHTTTCEEHHHHCSEEC
T ss_pred             EEEEecCCCccC--ChHHHHHHHHHHHHHHhc--------CCcEEEEeECCCCCCCCCcHHHhhccccccchHHhhcccc
Confidence            999999977532  234588888888766542        67999999999999  889999998889999998765431


Q ss_pred             CCCCCceeeccc---CCCccccccceeccCc
Q 013259          249 DADAHKWVSHRN---HRGNICGVDFIWLLNP  276 (447)
Q Consensus       249 ~~~~~tw~~~~~---~~~~~~rIDyI~~~~~  276 (447)
                        ...||.....   ......||||||+++.
T Consensus       208 --~~~t~~~~~~~~~~~~~~~riD~i~~s~~  236 (266)
T 3teb_A          208 --DGITVDKSIHGWDNDKAKKRLDYIFSNKE  236 (266)
T ss_dssp             --CCCCEECC------CTTEECCEEEEESSC
T ss_pred             --CCccccCccCCcCcCCcCCeeEEEEeCCC
Confidence              2234421111   1122468999999764

>4gz1_A Tyrosyl-DNA phosphodiesterase 2; protein-DNA complex, DNA repair, 5'-DNA END processing, endonuclease/exonuclease/phosphatase domain; HET: DNA EPE; 1.50A {Mus musculus} PDB: 4gyz_A* 4gz0_A* 4gz2_A*

Probab=99.92  E-value=3.5e-25  Score=205.97  Aligned_cols=208  Identities=15%  Similarity=0.113  Sum_probs=135.6

Q ss_pred             CCceeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhhhcCCc
Q 013259           27 QPCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYV  106 (447)
Q Consensus        27 ~~~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~  106 (447)
                      ..+||||||||++.     +           ...|..|...|++.|++.+|||||||||.  . .....+...+.  .|.
T Consensus         7 ~~~l~v~swNi~g~-----~-----------~~~~~~r~~~i~~~i~~~~pDIi~LQEv~--~-~~~~~l~~~~~--~~~   65 (256)
T 4gz1_A            7 SSTISFITWNIDGL-----D-----------GCNLPERARGVCSCLALYSPDVVFLQEVI--P-PYCAYLKKRAA--SYT   65 (256)
T ss_dssp             GGEEEEEEEECCTT-----C-----------CTTHHHHHHHHHHHHHHHCCSEEEEEEEC--H-HHHHHHHHHCT--TEE
T ss_pred             CCcEEEEEEEcCCC-----c-----------CcCHHHHHHHHHHHHHHcCCCEEEEEcCC--H-HHHHHHHhhcc--ccc
Confidence            35899999999853     1           12467899999999999999999999993  2 23333333222  232


Q ss_pred             EEEecCCCCCCceEEEEEecCCceEeeeEEEEecCCCCchhhhhhhcccccccccccCCCCCeEEEEEecccCCCCCCCc
Q 013259          107 NFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLS  186 (447)
Q Consensus       107 ~~~~~~~~~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~v~n~HL~~~~~~~~~  186 (447)
                      +..   ....+.|.+++++..++++.......++........          ....+...+..+.|+|+||.++.  ...
T Consensus        66 ~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~v~~~Hl~~~~--~~~  130 (256)
T 4gz1_A           66 IIT---GNEEGYFTAILLKKGRVKFKSQEIIPFPNTKMMRNL----------LCVNVSLGGNEFCLMTSHLESTR--EHS  130 (256)
T ss_dssp             EEE---SCSSSSEEEEEEETTTEEEEEEEEEECTTCSSCCEE----------EEEEEEETTEEEEEEECBCCCSG--GGH
T ss_pred             eee---ccccCCceEEEEEeccccceecccccCCcccccceE----------EEEEEEeCCEEEEEEeecccccc--cch
Confidence            222   334556777777776677776666655443211111          11223346789999999997643  334


Q ss_pred             hhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCCchhHhhhhCCCcccccccccCCCCCCCceeeccc-----C
Q 013259          187 LVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRN-----H  261 (447)
Q Consensus       187 ~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~g~~d~~~~~~~~~~~~~~tw~~~~~-----~  261 (447)
                      ..|..|+..+.+.+++.     ..+.|+|||||||..+.+..+..+...++.++|...+.... ...+|....+     .
T Consensus       131 ~~~~~q~~~~~~~l~~~-----~~~~pvIl~GDfN~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  204 (256)
T 4gz1_A          131 AERIRQLKTVLGKMQEA-----PDSTTVIFAGDTNLRDQEVIKCGGLPDNVFDAWEFLGKPKH-CQYTWDTKANNNLRIP  204 (256)
T ss_dssp             HHHHHHHHHHHHHHHHS-----CTTSEEEEEEECCCCHHHHHHHTCSCTTEEEHHHHTTCCGG-GSCSEETTTCCTTCCS
T ss_pred             hhhhHHHHHHhhhhhhc-----cCcceEEEeCccCCCcchhhhhhhccchhhhHHHHhcCCCC-CCcccccCCCCccccC
Confidence            56788888887777653     25679999999999988877777777788888877654321 1233332221     1


Q ss_pred             CCccccccceeccCc
Q 013259          262 RGNICGVDFIWLLNP  276 (447)
Q Consensus       262 ~~~~~rIDyI~~~~~  276 (447)
                      .....||||||+++.
T Consensus       205 ~~~~~riD~I~~~~~  219 (256)
T 4gz1_A          205 AAYKHRFDRIFFRAE  219 (256)
T ss_dssp             SCCEECCEEEEEECC
T ss_pred             CCCCccEEEEEEECC
Confidence            122458999999764

>4f1h_A Tyrosyl-DNA phosphodiesterase 2; hydrolase-DNA complex; HET: DNA; 1.66A {Danio rerio} PDB: 4fpv_A* 4f1h_B*

Probab=99.92  E-value=5.2e-25  Score=203.00  Aligned_cols=208  Identities=14%  Similarity=0.103  Sum_probs=133.8

Q ss_pred             CceeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhhhcCCcE
Q 013259           28 PCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVN  107 (447)
Q Consensus        28 ~~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~  107 (447)
                      .+||||||||++.     +           ...|..|...|++.|++.+|||||||||.  . .....+..   ..++.+
T Consensus         2 ~~l~v~t~Ni~g~-----~-----------~~~~~~r~~~i~~~i~~~~pDIi~LQEv~--~-~~~~~l~~---~~~~~~   59 (250)
T 4f1h_A            2 SKLSIISWNVDGL-----D-----------TLNLADRARGLCSYLALYTPDVVFLQELI--P-AYVQYLKK---RAVSYL   59 (250)
T ss_dssp             CCEEEEEEECCTT-----C-----------CTTHHHHHHHHHHHHHHHCCSEEEEEEEC--H-HHHHHHHH---HCTTEE
T ss_pred             CeEEEEEEEeCCC-----C-----------CcCHHHHHHHHHHHHHHcCCCEEEEEeCC--H-HHHHHHHH---hccCce
Confidence            4799999999853     1           12467899999999999999999999994  2 22333333   234444


Q ss_pred             EEecCCCCCCceEEEEEecCCceEeeeEEEEecCCCCchhhhhhhcccccccccccCCCCCeEEEEEecccCCCCCCCch
Q 013259          108 FKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSL  187 (447)
Q Consensus       108 ~~~~~~~~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~v~n~HL~~~~~~~~~~  187 (447)
                      ++. .......|.+++.+++ +++.....+.++........          ........+..+.|+++|+.+..  ....
T Consensus        60 ~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~v~~~hl~~~~--~~~~  125 (250)
T 4f1h_A           60 FFE-GSDDGYFTGIMLRKSR-VKFLESEIICFPTTQMMRNL----------LIAQVTFSGQKLYLMTSHLESCK--NQSQ  125 (250)
T ss_dssp             EEE-SCSSSSEEEEEEETTT-CEEEEEEEEECTTCSSCCEE----------EEEEEEETTEEEEEEECBCCCSG--GGHH
T ss_pred             eec-ccccccCceeEEeecc-ccceecccccccCccccceE----------EEEEEecCCcEEEEecccccccc--ccHH
Confidence            333 2223333455554455 89998888876654321111          11233346789999999997643  3345


Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCCchhHhhhhCCCcccccccccCCCCCCCceeeccc-----CC
Q 013259          188 VRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRN-----HR  262 (447)
Q Consensus       188 ~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~g~~d~~~~~~~~~~~~~~tw~~~~~-----~~  262 (447)
                      .|..|+..+.+.+++.     ....|+|||||||+.+.+..+..+...++.++|...+... ....+|....+     ..
T Consensus       126 ~r~~q~~~~~~~l~~~-----~~~~pvIl~GDfN~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  199 (250)
T 4f1h_A          126 ERTKQLRVVLQKIKEA-----PEDAIVIFAGDTNLRDAEVANVGGLPAGVCDVWEQLGKQE-HCRYTWDTKANSNKTVPY  199 (250)
T ss_dssp             HHHHHHHHHHHHHHHS-----CTTEEEEEEEECCCCHHHHHTTTSSCTTEEEHHHHTTCCG-GGCCSEETTTCCSSCCSS
T ss_pred             HHHHHHHHHHHHHHhc-----CCCCCEEEEEecCCCCcchhhhhhccccchHHHHHhcCCc-cCCcccccccCCCCCcCC
Confidence            6888888888877652     2567999999999988877777776777888877665322 11233332211     11


Q ss_pred             CccccccceeccCcc
Q 013259          263 GNICGVDFIWLLNPN  277 (447)
Q Consensus       263 ~~~~rIDyI~~~~~~  277 (447)
                      ....||||||+++..
T Consensus       200 ~~~~riD~I~~~~~~  214 (250)
T 4f1h_A          200 VSRCRFDRIFLRSAK  214 (250)
T ss_dssp             CCEECCEEEEEECCT
T ss_pred             CCCccEEEEEEeCcc
Confidence            224589999997643

>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}

Probab=99.91  E-value=4.9e-26  Score=243.30  Aligned_cols=201  Identities=21%  Similarity=0.370  Sum_probs=51.8

Q ss_pred             CceeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhhhcCCcE
Q 013259           28 PCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVN  107 (447)
Q Consensus        28 ~~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~  107 (447)
                      ..++++||||+++.|.....+ .+|  +.....|..|+..|++.|..++|||||||||+  ...+.+.+...|..+||.+
T Consensus       393 ~~~~~ls~Nil~~~~~~~~~~-~~~--p~~~~~w~~R~~~i~~~I~~~~pDIIcLQEV~--~~~~~~~l~~~l~~~gY~~  467 (727)
T 4b8c_D          393 RTFTVLSYNTLCQHYATPKMY-RYT--PSWALSWDYRRNKLKEQILSYDSDLLCLQEVE--SKTFEEYWVPLLDKHGYTG  467 (727)
T ss_dssp             ---------CCCGGGCCTTTC-CSS--CHHHHSHHHHHHHHHHHHHHSCCSSEEEC-CC--HHHHHTTTCC-------CE
T ss_pred             cceeeeeccccccccCccccc-ccc--chhhhhhhhhhhHHHHHHHHcCCCeEEEEecC--HHHHHHHHHHHHHhCCccE
Confidence            368999999998777654322 233  23456899999999999999999999999994  3344455566677789998


Q ss_pred             EEecCC---------CCCCceEEEEEecCCceEeeeEEEEecCCCCc----------hhhhhhhcccccccccccCCCCC
Q 013259          108 FKLART---------NNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDR----------VAQLLHVELIDPFSQCRNGDLRQ  168 (447)
Q Consensus       108 ~~~~~~---------~~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~----------~~~~~~l~~~~~~~~~~~~~~g~  168 (447)
                      ++..+.         +..+.|+|||||+.+|++++...+.|++....          ............++..+....|.
T Consensus       468 ~~~~~~~~~~~~~~~~~~~~G~AI~y~~srf~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~i~~~~~l~~~~~g~  547 (727)
T 4b8c_D          468 IFHAKARAKTMHSKDSKKVDGCCIFFKRDQFKLITKDAMDFSGAWMKHKKFQRTEDYLNRAMNKDNVALFLKLQHIPSGD  547 (727)
T ss_dssp             EC----------------CCCCEEEC------------------------------------------------------
T ss_pred             EEeccCCcccccccCCCCcccEEEEEEcccceEeeeeEEeechhhhhchhhcccHHHHhhcccCCcEEEEEEEeecCCCc
Confidence            774332         34578999999988899999988877542111          00000000011111222334678


Q ss_pred             eEEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHHHcC-------CCCCcEEEeecCCCccCCchhHhhhhC
Q 013259          169 EILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHN-------LKPIPIILCGDWNGSKRGHVYKFLRSQ  235 (447)
Q Consensus       169 ~l~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~~-------~~~~pvIl~GDFN~~p~s~~~~~l~~~  235 (447)
                      .|+|+||||.+.+  .....|..|+..++++++++.+...       ..+.|+|||||||+.|.+.+|+.|...
T Consensus       548 ~l~V~ntHL~~~p--~~~~~R~~Qa~~l~~~l~~~~~~~~~~~~~~~~~~~pvIl~GDFNs~P~s~~~~~l~~~  619 (727)
T 4b8c_D          548 TIWAVTTHLHWDP--KFNDVKTFQVGVLLDHLETLLKEETSHNFRQDIKKFPVLICGDFNSYINSAVYELINTG  619 (727)
T ss_dssp             --------------------------------------------------------------------------
T ss_pred             eEEEEEeccccCC--CCCchHHHHHHHHHHHHHHHHHHhcccccccccCCCceEEecccCCCCCCcceEeeecC
Confidence            8999999998844  3456799999999998888754321       246799999999999999999998543

>3i41_A Beta-hemolysin; beta toxin, sphingomyelinase, toxin; 1.75A {Staphylococcus aureus} PDB: 3i46_A 3i48_A 3i5v_A* 3k55_A

Probab=99.91  E-value=5.1e-24  Score=205.80  Aligned_cols=223  Identities=13%  Similarity=0.114  Sum_probs=137.6

Q ss_pred             CCCCceeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhh-hc
Q 013259           25 QQQPCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLS-DA  103 (447)
Q Consensus        25 ~~~~~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~-~~  103 (447)
                      ..+.+||||||||+++.+.           ......|..|...|+..+...+|||||||||+..  .....+...|. .+
T Consensus        25 ~~~~~lrV~T~Ni~~~~~~-----------~~~~~~~~~R~~~i~~~~~~~~pDIv~LQEv~~~--~~~~~l~~~L~~~~   91 (317)
T 3i41_A           25 KDDTDLKLVSHNVYMLSTV-----------LYPNWGQYKRADLIGQSSYIKNNDVVIFNEAFDN--GASDKLLSNVKKEY   91 (317)
T ss_dssp             ---CCCCEEEEEEEECCTT-----------TSTTSCHHHHHHHHHHCSTTSSCSEEEEEEECSH--HHHHHHHHHTTTTC
T ss_pred             CCCCceEEEEEecccCccc-----------cCCCccHHHHHHHHHHHhhccCCCEEEEEeeccH--HHHHHHHHHHHHhC
Confidence            3456899999999974211           1122357889999999888899999999999532  11233334444 35


Q ss_pred             CCcEEEecCCCC--------------CCceEEEEEecCCceEeeeEEEEecCCCCchhhhhhhcccccccccccCCCCCe
Q 013259          104 GYVNFKLARTNN--------------RGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQE  169 (447)
Q Consensus       104 gy~~~~~~~~~~--------------~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~  169 (447)
                      +|.+...+....              ...|++|+  |+ +|++....+.++.....-..     ....+..+.+...|..
T Consensus        92 py~~~~~g~~~~~~~~~~~~y~~~~~~~~G~~il--Sr-~Pi~~~~~~~~~~~~~~d~~-----~~r~~~~~~i~~~g~~  163 (317)
T 3i41_A           92 PYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVAIV--SK-YPIKEKIQHVFKSGCGFDND-----SNKGFVYTKIEKNGKN  163 (317)
T ss_dssp             CEECCCTTSCSTTCSEEEESCCSSCSBCCCCEEE--ES-SCEEEEEEEECSCCCSSGGG-----BCCEEEEEEEEETTEE
T ss_pred             CcccccCCccccCccCcccccccccccCCccEEE--eC-CCCccceeEECCCCCCcccc-----cCcceEEEEEEECCEE
Confidence            554322211110              11489999  88 89999888877653211000     0011112333446789


Q ss_pred             EEEEEecccCCCCC----CCchhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCCchhHhhhhC-CCccccccc
Q 013259          170 ILIVNTHLLFPHDS----SLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQ-GFVSSYDTA  244 (447)
Q Consensus       170 l~v~n~HL~~~~~~----~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~-g~~d~~~~~  244 (447)
                      |.|+|+||.++...    .....|..|+..|.++++...   ...+.|+|||||||+.|.+..++.|... ++.+.- ..
T Consensus       164 v~v~~~Hl~~~~~~~~~~~~~~~R~~q~~~l~~~i~~~~---~~~~~pvIl~GDfN~~~~s~~~~~l~~~l~l~~~~-~~  239 (317)
T 3i41_A          164 VHVIGTHTQSEDSRCGAGHDRKIRAEQMKEISDFVKKKN---IPKDETVYIGGDLNVNKGTPEFKDMLKNLNVNDVL-YA  239 (317)
T ss_dssp             EEEEEEECCCCCSSSCTTHHHHHHHHHHHHHHHHHHHHT---CCTTSCEEEEEECCCCTTSHHHHHHHHHHTBCCCE-EE
T ss_pred             EEEEEECCCCCCCCCcccccHHHHHHHHHHHHHHHHHhc---cCCCCeEEEEeECCCCCCCHHHHHHHHhcCCCCcc-cC
Confidence            99999999875421    235779999999999887752   1247799999999999999999988754 444321 11


Q ss_pred             ccCCCCCCCceeeccc-------CCCccccccceeccCcc
Q 013259          245 HQYTDADAHKWVSHRN-------HRGNICGVDFIWLLNPN  277 (447)
Q Consensus       245 ~~~~~~~~~tw~~~~~-------~~~~~~rIDyI~~~~~~  277 (447)
                      .     ...||....+       ..+...+|||||+++..
T Consensus       240 g-----~~~t~d~~~n~~~~~~~p~~~~~rLDyIlvs~~~  274 (317)
T 3i41_A          240 G-----HNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDH  274 (317)
T ss_dssp             E-----CSCSBCTTTCHHHHHHCTTCCCBCCEEEEEBTTS
T ss_pred             C-----CCcccCCCCCccccccCCCCCCcceEEEEEeCCc
Confidence            0     0123322211       11223589999998764

>1zwx_A SMCL, sphingomyelinase-C; dnase1-like fold, beta-hairpin, hydrolase; 1.90A {Listeria ivanovii} SCOP: d.151.1.3

Probab=99.91  E-value=5.3e-24  Score=203.89  Aligned_cols=218  Identities=14%  Similarity=0.129  Sum_probs=135.2

Q ss_pred             CCCceeEEecccccccccCCCCCCCCCCCCCccCCh--hhHHHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhh-h
Q 013259           26 QQPCITCTTFNILAPIYKRLSNEDQNCRESDCRAYW--FGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLS-D  102 (447)
Q Consensus        26 ~~~~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~--~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~-~  102 (447)
                      .+..||||||||++...   .          ....|  ..|.+.++..|...+|||||||||+..  .....+...|. .
T Consensus         7 ~~~~lrv~t~Ni~~~~~---~----------~~~~~~~~~r~~~i~~~~~~~~~DIv~LQEv~~~--~~~~~l~~~l~~~   71 (301)
T 1zwx_A            7 YPGNFKITSHNVYLFSR---N----------IYPNWGQMHRADLIAQADYMKNNDVVILNEAFDT--SASHRLLNNLREM   71 (301)
T ss_dssp             CCCSCEEEEEEEEECCT---T----------TSTTSCHHHHHHHHHTSGGGSSCSEEEEEEECSH--HHHHHHHHHTTTT
T ss_pred             CCCceEEEEEECccCCc---c----------ccCCCCHHHHHHHHHHhhccCCCCEEEEeccccH--HHHHHHHHHHhhc
Confidence            34579999999997410   0          01124  568888888888999999999999522  21223333343 3


Q ss_pred             cCCcEEEecCC--------------CCCCceEEEEEecCCceEeeeEEEEecCCCCchhhhhhhcccccccccccCCCCC
Q 013259          103 AGYVNFKLART--------------NNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQ  168 (447)
Q Consensus       103 ~gy~~~~~~~~--------------~~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~  168 (447)
                      ++|.+.+....              .....|+||+  |+ +|+.....+.++........     ....+..+.+...|+
T Consensus        72 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~G~ail--Sr-~pi~~~~~~~~~~~~~~~~~-----~~r~~~~~~~~~~g~  143 (301)
T 1zwx_A           72 YPHQTPVIGRSKHGWDKTEGNYSNFALEDGGVAVV--SQ-WPIVEKSQHIFQRGGGADRL-----SNKGFAYVKIMKNGK  143 (301)
T ss_dssp             CCEECCCTTSCSTTCSEEEC-----CCBCCCCEEE--ES-SCEEEEEEEECSCCCGGGGG-----BCCEEEEEEEEETTE
T ss_pred             CCccccccCCccccccccccccccccccCCCEEEE--ec-CCcccceEEEecCCCCcccc-----cCCCeEEEEEEECCE
Confidence            55543322211              1133699999  88 89998888877743211000     001111233334578


Q ss_pred             eEEEEEecccCCCCC----CCchhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCCchhHhhhhC-CCc--ccc
Q 013259          169 EILIVNTHLLFPHDS----SLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQ-GFV--SSY  241 (447)
Q Consensus       169 ~l~v~n~HL~~~~~~----~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~-g~~--d~~  241 (447)
                      .|.|+||||.++...    .....|..|+..|.+++++..   ...+.|+|||||||+.|.+..|+.|... ++.  |+|
T Consensus       144 ~~~v~~~Hl~~~~~~~~~~~~~~~R~~q~~~l~~~i~~~~---~~~~~pvIl~GDfN~~~~~~~~~~l~~~~~~~~~d~~  220 (301)
T 1zwx_A          144 PYHIIGTHTQADDSLISKDTSRAIRAEQMQEIQTFIAKKN---IPKDEIIFIGGDLNVNYGTDEYHDMLKLLNVSSPANF  220 (301)
T ss_dssp             EEEEEEEECCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHT---CCTTSEEEEEEECCCCTTSHHHHHHHHHHTBCCCTTC
T ss_pred             EEEEEEecCCCCCCCCCccccHHHHHHHHHHHHHHHHHhC---CCCCCeEEEEeeCCCCCCcHHHHHHHHHcCCCCCccc
Confidence            999999999775321    134568899999888887641   1246799999999999999999888653 554  555


Q ss_pred             cccccCCCCCCCceee-------cccCCCccccccceeccCc
Q 013259          242 DTAHQYTDADAHKWVS-------HRNHRGNICGVDFIWLLNP  276 (447)
Q Consensus       242 ~~~~~~~~~~~~tw~~-------~~~~~~~~~rIDyI~~~~~  276 (447)
                      ..       ...||..       ...+.....||||||+++.
T Consensus       221 ~g-------~~~T~~~~~n~~~~~t~~~~~~~rID~I~~~~~  255 (301)
T 1zwx_A          221 NG-------QMATWDPTTNSMLKESYPKAAPEYLDYIFVENG  255 (301)
T ss_dssp             CT-------TSCSBCTTTCHHHHHHCTTSCCBCCEEEEEBTT
T ss_pred             cC-------CCceECCccCccccccCCCCCcceEeEEEEeCC
Confidence            42       1234421       0000122568999999865

>2jc4_A Exodeoxyribonuclease III; hydrolase, repair phosphodiesterase, DNA repair, exonuclease, endonuclease; HET: 1PE; 1.90A {Neisseria meningitidis}

Probab=99.88  E-value=2e-22  Score=187.86  Aligned_cols=198  Identities=14%  Similarity=0.139  Sum_probs=123.6

Q ss_pred             eeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhhhcCCcEEE
Q 013259           30 ITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFK  109 (447)
Q Consensus        30 lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~~  109 (447)
                      ||||||||++                     |..|.+.|++.|++.+||||||||+......+.   ...+...||.+++
T Consensus         1 lrv~t~Nv~~---------------------~~~~~~~i~~~i~~~~~DIv~LQE~~~~~~~~~---~~~~~~~gy~~~~   56 (256)
T 2jc4_A            1 MKITTWNVNS---------------------LNVRLPQVQNLLADNPPDILVLQELKLDQDKFP---AAALQMMGWHCVW   56 (256)
T ss_dssp             CEEEEEECSC---------------------HHHHHHHHHHHHHSSCCSEEEEECCCSCGGGSC---HHHHHTTTCEEEE
T ss_pred             CEEEEEEcCC---------------------cHHHHHHHHHHHHhcCCCEEEEEeeccchhcCC---HhHHhhcCCeEEE
Confidence            6999999995                     234778999999999999999999975443221   2334457898766


Q ss_pred             ecCCCCCCceEEEEEecCCceEeeeEEEEecCCC-CchhhhhhhcccccccccccCCCCCeEEEEEecccCCCCCC--Cc
Q 013259          110 LARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFG-DRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSS--LS  186 (447)
Q Consensus       110 ~~~~~~~~~G~ai~~rs~~~~i~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~g~~l~v~n~HL~~~~~~~--~~  186 (447)
                      .+  .....|+||++|.   |+..... .++... +.....+         .+.+    +.+.|+|+|+.+.....  ..
T Consensus        57 ~~--~~~~~G~ailsr~---~~~~~~~-~~~~~~~~~~~~~~---------~~~~----~~~~v~~~h~~~~~~~~~~~~  117 (256)
T 2jc4_A           57 SG--QKTYNGVAIVSRS---VPQDVHF-GLPALPDDPQRRVI---------AATV----SGVRVINVYCVNGEALDSPKF  117 (256)
T ss_dssp             EC--CSSSCCEEEEESS---CCEEEEE-SCTTSTTCCSCCEE---------EEEE----TTEEEEEEECCCCCSTTSHHH
T ss_pred             CC--CCcceEEEEEECC---ChHHhee-cCCCCccCCcCcEE---------EEEe----CCEEEEEEEecCCCCCCcHhH
Confidence            43  3345699999543   5443322 132210 1111111         0111    36999999995533211  11


Q ss_pred             hhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCCc--------------------hhHhhhhCCCccccccccc
Q 013259          187 LVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGH--------------------VYKFLRSQGFVSSYDTAHQ  246 (447)
Q Consensus       187 ~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~--------------------~~~~l~~~g~~d~~~~~~~  246 (447)
                      ..|..|+..+.+.+.+...    .+.|+|||||||+.+.+.                    .++.|...|+.|+|+..++
T Consensus       118 ~~r~~~~~~l~~~~~~~~~----~~~~~il~GDFN~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~D~~~~~~~  193 (256)
T 2jc4_A          118 KYKEQWFAALTEFVRDEMT----RHGKLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWFQNLLDLGLTDSLRQVHP  193 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHT----TCSSEEEEEECCCCCSGGGBSSGGGGTTCTTSCHHHHHHHHHHHTTTCEEHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHHhc----CCCCEEEEeECCCCCchhhccChhHhCCCCCcCHHHHHHHHHHHhcCcEEhhhhhCC
Confidence            2355677777777766532    578999999999988752                    2455667799999987664


Q ss_pred             CCCCCCCceeecccC---CCccccccceeccCc
Q 013259          247 YTDADAHKWVSHRNH---RGNICGVDFIWLLNP  276 (447)
Q Consensus       247 ~~~~~~~tw~~~~~~---~~~~~rIDyI~~~~~  276 (447)
                      ..  ...||..+...   .....||||||+++.
T Consensus       194 ~~--~~~T~~~~~~~~~~~~~~~rID~i~~s~~  224 (256)
T 2jc4_A          194 EG--AFYTWFDYRGAMFQRKLGLRIDHILVSPA  224 (256)
T ss_dssp             SS--CCCCBCCTTTTHHHHTCCBCCEEEEECHH
T ss_pred             CC--CceeeEcCCCCccccCcEEEEEEEEECHH
Confidence            32  24677554311   112458999999653

>1ako_A Exonuclease III; AP-endonuclease, DNA repair; 1.70A {Escherichia coli} SCOP: d.151.1.1

Probab=99.88  E-value=6.8e-23  Score=192.43  Aligned_cols=204  Identities=17%  Similarity=0.196  Sum_probs=125.3

Q ss_pred             eeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhhhcCCcEEE
Q 013259           30 ITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFK  109 (447)
Q Consensus        30 lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~~  109 (447)
                      ||||||||++.                     ..|...|++.|.+.+||||||||+......+.   ...+...||.+++
T Consensus         1 lrv~t~Nv~~~---------------------~~~~~~i~~~i~~~~~Dii~LQE~~~~~~~~~---~~~l~~~gy~~~~   56 (268)
T 1ako_A            1 MKFVSFNINGL---------------------RARPHQLEAIVEKHQPDVIGLQETKVHDDMFP---LEEVAKLGYNVFY   56 (268)
T ss_dssp             CEEEEEECSCG---------------------GGCHHHHHHHHHHHCCSEEEEECCCCCGGGCC---HHHHHHTTCEEEE
T ss_pred             CEEEEEehhHH---------------------HHHHHHHHHHHHHcCCCEEEEEeccCChhhCC---HhHhccCCCcEEE
Confidence            69999999852                     12568899999999999999999975443321   2233346888776


Q ss_pred             ecCCCCCCceEEEEEecCCceEeeeEEEEecCCCCchhhhhhhcccccccccccCCCCCeEEEEEecccCCCCCC---Cc
Q 013259          110 LARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSS---LS  186 (447)
Q Consensus       110 ~~~~~~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~v~n~HL~~~~~~~---~~  186 (447)
                      ..  .....|+||++|.   ++.... ..++.......        ..+..+.+...++.+.|+|+|+.++....   ..
T Consensus        57 ~~--~~~~~G~ailsr~---~~~~~~-~~~~~~~~~~~--------~~~~~~~~~~~~~~~~v~~~Hl~~~~~~~~~~~~  122 (268)
T 1ako_A           57 HG--QKGHYGVALLTKE---TPIAVR-RGFPGDDEEAQ--------RRIIMAEIPSLLGNVTVINGYFPQGESRDHPIKF  122 (268)
T ss_dssp             EE--ETTEEEEEEEESS---CCSEEE-ESSTTCCHHHH--------TTEEEEEEEETTEEEEEEEEECCCCCBTTCTTHH
T ss_pred             eC--CCCcceEEEEEec---Ccceee-eCCCCcccccC--------CCEEEEEEEcCCCeEEEEEEEecCCCCcccchhH
Confidence            53  2345799999544   443322 11221100000        00111223334568999999997643211   12


Q ss_pred             hhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCCchh--------------------------HhhhhCCCccc
Q 013259          187 LVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVY--------------------------KFLRSQGFVSS  240 (447)
Q Consensus       187 ~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~--------------------------~~l~~~g~~d~  240 (447)
                      ..|..|+..+.+.+.+..    ..+.|+|||||||+.|.+..+                          +.+...|+.|+
T Consensus       123 ~~r~~~~~~l~~~~~~~~----~~~~~~Il~GDFN~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~gl~D~  198 (268)
T 1ako_A          123 PAKAQFYQNLQNYLETEL----KRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWGLVDT  198 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHC----CTTSCEEEEEECCCCCSGGGBCSCHHHHHHHHHHTBTTSCHHHHHHHHHHHHTTEEEH
T ss_pred             HHHHHHHHHHHHHHHHhh----hCCCCEEEEeECCCCCchhcccCcccChhhhccCCCcCcCHHHHHHHHHHhcCCCEEe
Confidence            357778877777776542    257899999999998876443                          33556789999


Q ss_pred             ccccccCCCCCCCceeecccC---CCccccccceeccCc
Q 013259          241 YDTAHQYTDADAHKWVSHRNH---RGNICGVDFIWLLNP  276 (447)
Q Consensus       241 ~~~~~~~~~~~~~tw~~~~~~---~~~~~rIDyI~~~~~  276 (447)
                      |+..++.. ....||..+...   .+...||||||+++.
T Consensus       199 ~~~~~~~~-~~~~T~~~~~~~~~~~~~~~riD~il~s~~  236 (268)
T 1ako_A          199 FRHANPQT-ADRFSWFDYRSKGFDDNRGLRIDLLLASQP  236 (268)
T ss_dssp             HHHHSTTC-CSCCSBCCTTTTHHHHTCCBCCEEEEEEHH
T ss_pred             EhhhCCCC-CCCeeEeCCcCCccccCceEEEEEEEeCHH
Confidence            98776432 123566554311   012369999999653

>2ddr_A Sphingomyelin phosphodiesterase; DNAse I like folding, riken structural genomics/proteomics initiative, RSGI, structural genomics, hydrolase; 1.40A {Bacillus cereus} SCOP: d.151.1.3 PDB: 2dds_A 2ddt_A* 2uyr_X

Probab=99.88  E-value=2.1e-22  Score=193.12  Aligned_cols=220  Identities=14%  Similarity=0.131  Sum_probs=130.2

Q ss_pred             CCCceeEEecccccccccCCCCCCCCCCCCCccCCh--hhHHHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhh-h
Q 013259           26 QQPCITCTTFNILAPIYKRLSNEDQNCRESDCRAYW--FGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLS-D  102 (447)
Q Consensus        26 ~~~~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~--~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~-~  102 (447)
                      .+..||||||||++..     ..        ....|  ..|...++..+...+|||||||||+..  .....+...|. .
T Consensus         6 ~~~~lrv~t~Ni~~~~-----~~--------~~~~~~~~~r~~~~~~~~~~~~~DIv~LQEv~~~--~~~~~l~~~l~~~   70 (306)
T 2ddr_A            6 QNDTLKVMTHNVYMLS-----TN--------LYPNWGQTERADLIGAADYIKNQDVVILNEVFDN--SASDRLLGNLKKE   70 (306)
T ss_dssp             -CCEEEEEEEEEEECC-----TT--------TCTTSCHHHHHHHHHHCSTTCSCSEEEEEEECCH--HHHHHHHHHHTTT
T ss_pred             CCCEEEEEEEECccCc-----cc--------ccCCCCHHHHHHHHHHHhhccCCCEEEEEeecCH--HHHHHHHHHHhhh
Confidence            3457999999999741     00        01124  457888888888899999999999532  21223333333 2


Q ss_pred             cCCcEEEecC---------------CCCCCceEEEEEecCCceEeeeEEEEecCCCCchhhhhhhcccccccccccCCCC
Q 013259          103 AGYVNFKLAR---------------TNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLR  167 (447)
Q Consensus       103 ~gy~~~~~~~---------------~~~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g  167 (447)
                      ++|.+.+...               ......|++|+  |+ +|+.....+.++........     ....+..+.+...+
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ail--Sr-~pi~~~~~~~~~~~~~~~~~-----~~r~~~~~~i~~~g  142 (306)
T 2ddr_A           71 YPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIV--SK-WPIAEKIQYVFAKGCGPDNL-----SNKGFVYTKIKKND  142 (306)
T ss_dssp             CCEECCCTTSCCSTTSSEEEESCCTTCSSCCCCEEE--ES-SCEEEEEEEECSCCC----C-----CCCEEEEEEEEETT
T ss_pred             CCceeeccCcccccccccccccccccCccCCeEEEE--EC-CCcccccEEEcCCCCCcchh-----cCCCeEEEEEEeCC
Confidence            4443211111               11234699999  88 89998877777542100000     00011112333357


Q ss_pred             CeEEEEEecccCCCCC----CCchhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCcc------CCchhHhhhhC-C
Q 013259          168 QEILIVNTHLLFPHDS----SLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSK------RGHVYKFLRSQ-G  236 (447)
Q Consensus       168 ~~l~v~n~HL~~~~~~----~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p------~s~~~~~l~~~-g  236 (447)
                      +.+.|+|+||.++...    .....|..|+..+.+++....   ...+.|+|||||||+.+      .+..++.|... +
T Consensus       143 ~~~~v~~~Hl~~~~~~~~~~~~~~~R~~q~~~l~~~i~~~~---~~~~~pvil~GDfN~~~~~~d~~~s~~~~~l~~~~~  219 (306)
T 2ddr_A          143 RFVHVIGTHLQAEDSMCGKTSPASVRTNQLKEIQDFIKNKN---IPNNEYVLIGGDMNVNKINAENNNDSEYASMFKTLN  219 (306)
T ss_dssp             EEEEEEEEECCCC-------CHHHHHHHHHHHHHHHHHHHT---CCTTSCEEEEEECCCCCTTTSSCTTSHHHHHHHHHT
T ss_pred             EEEEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHHhc---CCCCCEEEEEeeCCCCcccccccCCHHHHHHHHhcC
Confidence            8999999999876321    245678999999888887641   11467999999999999      88888877652 4


Q ss_pred             CcccccccccCCCCCCCceeec-------ccCCCccccccceeccCcc
Q 013259          237 FVSSYDTAHQYTDADAHKWVSH-------RNHRGNICGVDFIWLLNPN  277 (447)
Q Consensus       237 ~~d~~~~~~~~~~~~~~tw~~~-------~~~~~~~~rIDyI~~~~~~  277 (447)
                      +.+.  ...    ....||...       ..+.....||||||+++..
T Consensus       220 ~~~~--~~~----g~~~T~~~~~n~~~~~t~~~~~~~rID~I~~s~~~  261 (306)
T 2ddr_A          220 ASVP--SYT----GHTATWDATTNSIAKYNFPDSPAEYLDYIIASKDH  261 (306)
T ss_dssp             BCCC--EEE----ECSCSBCTTTCHHHHHHCTTSCCBCCEEEEEBTTS
T ss_pred             CCCc--ccC----CCCcccCCCCCccccccCCCCCcceeeEEEEeCCC
Confidence            4431  111    123455321       0011235689999998653

>3g91_A MTH0212, exodeoxyribonuclease; double-strand specific 3'-5' exonuclease, AP endonuclease; HET: PG4; 1.23A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fzi_A 3g0a_A 3g1k_A 3g2c_A 3g3c_A* 3g3y_A* 3g4t_A* 3g00_A 3g0r_A* 3g2d_A* 3g38_A 3g8v_A* 3ga6_A

Probab=99.86  E-value=1.4e-21  Score=183.65  Aligned_cols=202  Identities=18%  Similarity=0.227  Sum_probs=121.8

Q ss_pred             ceeEEecccccccccCCCCCCCCCCCCCccCChhhHHH-HHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhhhcCCcE
Q 013259           29 CITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQ-RILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVN  107 (447)
Q Consensus        29 ~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~-~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~  107 (447)
                      .|||+||||.+..                     .+.+ .++++|++.+||||||||++.....+...   .....||..
T Consensus         3 ~l~i~s~Nv~g~~---------------------~~~~~~l~~~i~~~~~DIv~LQEt~~~~~~~~~~---~~~~~gy~~   58 (265)
T 3g91_A            3 VLKIISWNVNGLR---------------------AVHRKGFLKWFMEEKPDILCLQEIKAAPEQLPRK---LRHVEGYRS   58 (265)
T ss_dssp             EEEEEEEECSCHH---------------------HHHHHTHHHHHHHHCCSEEEEECCCSCGGGSCHH---HHCCTTCEE
T ss_pred             ccEEEEEEcCCch---------------------hhhhhhHHHHHHhcCCCEEEEEeccccccccChh---hhcccCCcE
Confidence            5999999998531                     1223 48999999999999999997554343322   222468987


Q ss_pred             EEecCCCCCCceEEEEEecCCceEeeeEEEEecCC-CCchhhhhhhcccccccccccCCCCCeEEEEEecccCCCCC-CC
Q 013259          108 FKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDF-GDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDS-SL  185 (447)
Q Consensus       108 ~~~~~~~~~~~G~ai~~rs~~~~i~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~g~~l~v~n~HL~~~~~~-~~  185 (447)
                      ++......+..|+||++|.....+...    +... .+..+..+             ......+.|+|+|+...... ..
T Consensus        59 ~~~~~~~~~~~Gvail~k~~~~~~~~~----~~~~~~d~~gr~i-------------~~~~~~~~i~~vy~p~~~~~~~~  121 (265)
T 3g91_A           59 FFTPAERKGYSGVAMYTKVPPSSLREG----FGVERFDTEGRIQ-------------IADFDDFLLYNIYFPNGAMSEER  121 (265)
T ss_dssp             EEECBSSTTSCCEEEEESSCCSEEECC----CSCHHHHSBSCEE-------------EEECSSCEEEEEECCCCTTCHHH
T ss_pred             EEccCCCCCcCEEEEEEecChHHhccC----CCCcccCCcCCEE-------------EEEeCCEEEEEEEecCCCCCchh
Confidence            766554455569999965543222111    1000 00001100             01235799999988432211 01


Q ss_pred             chhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCC--------------------chhHhhhhCCCcccccccc
Q 013259          186 SLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRG--------------------HVYKFLRSQGFVSSYDTAH  245 (447)
Q Consensus       186 ~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s--------------------~~~~~l~~~g~~d~~~~~~  245 (447)
                      ...|..+...+.+.+.....    .+.|+|||||||..+..                    ..++.+...|++|+|+..+
T Consensus       122 ~~~r~~~~~~l~~~~~~~~~----~~~~~ii~GDfN~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~D~~r~~~  197 (265)
T 3g91_A          122 LKYKLEFYDAFLEDVNRERD----SGRNVIICGDFNTAHREIDLARPKENSNVSGFLPVERAWIDKFIENGYVDTFRMFN  197 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCCCCSGGGBSCTGGGTTSTTSCHHHHHHHHHHHHTTEEETHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHc----CCCCEEEECccccCCchhhccCHhhcCCCCccCHHHHHHHHHHHhcCcEEeeHhhC
Confidence            12244556666666666543    46899999999987642                    2345555779999998877


Q ss_pred             cCCCCCCCceeecccC---CCccccccceeccCcc
Q 013259          246 QYTDADAHKWVSHRNH---RGNICGVDFIWLLNPN  277 (447)
Q Consensus       246 ~~~~~~~~tw~~~~~~---~~~~~rIDyI~~~~~~  277 (447)
                      +..  ..+||......   .+...||||||+++..
T Consensus       198 p~~--~~yT~~~~~~~~~~~~~~~rID~il~s~~~  230 (265)
T 3g91_A          198 SDP--GQYTWWSYRTRARERNVGWRLDYFFVNEEF  230 (265)
T ss_dssp             CCS--CCCSBCCSSTTTTTTTCCBCCEEEEEEGGG
T ss_pred             CCC--CCCCCcCCCCCccccCceEEEEEEEECHHH
Confidence            543  25667655422   1224589999997654

>2jc5_A Exodeoxyribonuclease; hydrolase, repair phosphodiesterase, DNA repair, exonuclease, endonuclease; HET: BCN DIO GOL; 1.50A {Neisseria meningitidis}

Probab=99.86  E-value=9.9e-22  Score=183.49  Aligned_cols=197  Identities=14%  Similarity=0.194  Sum_probs=117.0

Q ss_pred             eeEEecccccccccCCCCCCCCCCCCCccCChhhHHH-HHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhhhcCCcEE
Q 013259           30 ITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQ-RILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNF  108 (447)
Q Consensus        30 lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~-~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~  108 (447)
                      |||+||||++..                     .+.+ .|++.|++.+||||||||++.....+...   .....||.++
T Consensus         2 l~v~t~Ni~~~~---------------------~~~~~~i~~~i~~~~~DIi~LQE~~~~~~~~~~~---l~~~~gy~~~   57 (259)
T 2jc5_A            2 LKIISANVNGIR---------------------SAYKKGFYEYIAASGADIVCVQELKAQEADLSAD---MKNPHGMHGH   57 (259)
T ss_dssp             EEEEEEECSSHH---------------------HHHHTTHHHHHHHTTCSEEEEECCCCCGGGCCHH---HHSGGGCEEE
T ss_pred             cEEEEEeeccHH---------------------HHHHhHHHHHHHhcCCCEEEEEEecchhhccChh---hccccCCeEE
Confidence            899999998531                     1223 49999999999999999997544332222   2223578876


Q ss_pred             EecCCCCCCceEEEEEecCCceEeeeEEEEecCCC-CchhhhhhhcccccccccccCCCCCeEEEEEecccCCCCCCCch
Q 013259          109 KLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFG-DRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSL  187 (447)
Q Consensus       109 ~~~~~~~~~~G~ai~~rs~~~~i~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~g~~l~v~n~HL~~~~~~~~~~  187 (447)
                      +.........|+||++|.   ++..... .++... +..+..         ..+.    .+.+.|+|+|+.+...   ..
T Consensus        58 ~~~~~~~~~~G~ailsr~---~~~~~~~-~~~~~~~~~~~r~---------~~~~----~~~~~v~~~h~~~~~~---~~  117 (259)
T 2jc5_A           58 WHCAEKRGYSGVAVYSKR---KPDNVQI-GMGIEEFDREGRF---------VRCD----FGRLSVISLYLPSGSS---AE  117 (259)
T ss_dssp             EECCSSTTCCCEEEEESS---CCSEEEE-SCSCHHHHTTCCE---------EEEE----ETTEEEEEEECCCCTT---CH
T ss_pred             EeccCCCCcceEEEEEec---CceeEEe-CCCCCccCCCCeE---------EEEE----cCCEEEEEEeccCCCC---Cc
Confidence            654333345799999544   4443222 121100 000000         0111    2479999999966432   22


Q ss_pred             hhH----HHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCCc--------------------hhHhh-hhCCCccccc
Q 013259          188 VRL----HQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGH--------------------VYKFL-RSQGFVSSYD  242 (447)
Q Consensus       188 ~R~----~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~--------------------~~~~l-~~~g~~d~~~  242 (447)
                      .|.    .|+..+.+.+.+..+    .+.|+|||||||+.+.+.                    .+..+ ...|+.|+|+
T Consensus       118 ~r~~~~~~~~~~l~~~~~~~~~----~~~~~Il~GDFN~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~d~~~  193 (259)
T 2jc5_A          118 ERQQVKYRFLDAFYPMLEAMKN----EGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWR  193 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH----TCSEEEEEEECCCCCSGGGBSCSTTCTTSTTSCHHHHHHHHHHHHTTCCEEHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHh----cCCCEEEEeeCCCCCchhhccChhhcCCCCCcCHHHHHHHHHHhccCCcEEeeH
Confidence            344    455666666655432    478999999999986541                    12333 3679999998


Q ss_pred             ccccCCCCCCCceeecccC---CCccccccceeccCc
Q 013259          243 TAHQYTDADAHKWVSHRNH---RGNICGVDFIWLLNP  276 (447)
Q Consensus       243 ~~~~~~~~~~~tw~~~~~~---~~~~~rIDyI~~~~~  276 (447)
                      ..++.  ....||+...+.   .+...||||||+++.
T Consensus       194 ~~~~~--~~~~T~~~~~~~~~~~~~~~rID~i~~s~~  228 (259)
T 2jc5_A          194 TLYPD--VPGYTWWSNRGQAYAKDVGWRIDYQMVTPE  228 (259)
T ss_dssp             HHCTT--CCCCCEESCSSHHHHTTCEECCEEEEECHH
T ss_pred             hhCCC--CCCccEECCcCCCccCCCeeEEEEEEECHH
Confidence            76543  223677665421   112368999999643

>2voa_A AF_EXO, XTHA, exodeoxyribonuclease III; EXOIII, AP endonuclease, lyase; 1.7A {Archaeoglobus fulgidus}

Probab=99.86  E-value=5.1e-21  Score=178.61  Aligned_cols=198  Identities=18%  Similarity=0.225  Sum_probs=115.4

Q ss_pred             eeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhhhcCCcEEE
Q 013259           30 ITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFK  109 (447)
Q Consensus        30 lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~~  109 (447)
                      |||+||||++.     .                .+.+.+++.|++.+||||||||++.....+..   ..+...||.+++
T Consensus         2 lrv~t~Nv~g~-----~----------------~~~~~i~~~i~~~~~Dii~lQE~~~~~~~~~~---~~~~~~gy~~~~   57 (257)
T 2voa_A            2 LKIATFNVNSI-----R----------------SRLHIVIPWLKENKPDILCMQETKVENRKFPE---ADFHRIGYHVVF   57 (257)
T ss_dssp             EEEEEEECSCG-----G----------------GTHHHHHHHHHHHCCSEEEEECCCCCGGGCCH---HHHHTTTCEEEE
T ss_pred             eEEEEEecCCh-----H----------------HHHHHHHHHHhhcCCCEEEEEEeecchhhcCH---HHhhhCCCcEEE
Confidence            89999999852     0                13578999999999999999999654333221   123346887765


Q ss_pred             ecCCCCCCceEEEEEecCCceEeeeEEEEecCCCCchhhhhhhcccccccccccCCCCCeEEEEEecccCCCCCCCc--h
Q 013259          110 LARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLS--L  187 (447)
Q Consensus       110 ~~~~~~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~v~n~HL~~~~~~~~~--~  187 (447)
                      .+  .....|+||++|.   |+.... ..++..+......+.         +.+    +.+.|+|+|+.........  .
T Consensus        58 ~~--~~~~~G~ailsr~---~~~~~~-~~~~~~~~~~~r~l~---------~~~----~~~~v~~~h~p~~~~~~~~~~~  118 (257)
T 2voa_A           58 SG--SKGRNGVAIASLE---EPEDVS-FGLDSEPKDEDRLIR---------AKI----AGIDVINTYVPQGFKIDSEKYQ  118 (257)
T ss_dssp             EE--ETTEEEEEEEESS---CCEEEE-ESCSSSSCCGGGEEE---------EEE----TTEEEEEEECCCCSCTTSHHHH
T ss_pred             cC--CCCccEEEEEEcc---ChHHhe-ecCCCCccccCcEEE---------EEE----CCEEEEEEEeCCCCCCCcHHHH
Confidence            42  2233699999544   444322 122211100111110         111    3799999999432210111  1


Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCCc--------------------hhHhhhhCCCcccccccccC
Q 013259          188 VRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGH--------------------VYKFLRSQGFVSSYDTAHQY  247 (447)
Q Consensus       188 ~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~--------------------~~~~l~~~g~~d~~~~~~~~  247 (447)
                      .|..++..+.+.+.+..    ..+.|+|||||||+.+.+.                    .++.+...|+.|+|+..++.
T Consensus       119 ~r~~~~~~l~~~~~~~~----~~~~p~Il~GDFN~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~D~~~~~~p~  194 (257)
T 2voa_A          119 YKLQWLERLYHYLQKTV----DFRSFAVWCGDMNVAPEPIDVHSPDKLKNHVCFHEDARRAYKKILELGFVDVLRKIHPN  194 (257)
T ss_dssp             HHHHHHHHHHHHHHHHC----CTTSCEEEEEECSCCCSGGGBSCGGGCTTSTTTCHHHHHHHHHHHTTTCEEHHHHHSTT
T ss_pred             HHHHHHHHHHHHHHHHh----cCCCCEEEEeeCCCCCchhhccChhHhCCCCCCCHHHHHHHHHHHHcCcEeeehhhCCC
Confidence            23334455555554431    2567999999999876531                    24445567899999876543


Q ss_pred             CCCCCCceeec-ccC---CCccccccceeccCc
Q 013259          248 TDADAHKWVSH-RNH---RGNICGVDFIWLLNP  276 (447)
Q Consensus       248 ~~~~~~tw~~~-~~~---~~~~~rIDyI~~~~~  276 (447)
                      .  ...||... ...   .....||||||+++.
T Consensus       195 ~--~~~T~~~~~~~~~~~~~~~~rID~i~~s~~  225 (257)
T 2voa_A          195 E--RIYTFYDYRVKGAIERGLGWRGDAILATPP  225 (257)
T ss_dssp             C--CCCSBCCTTSTTTTTTTCCBCCEEEEECHH
T ss_pred             C--CCcceeccccCCceecCceEEEEEEEECHH
Confidence            2  34677665 321   122469999999654

>1vyb_A ORF2 contains A reverse transcriptase domain; endonuclease, APE-1 type, retrotransposition, retrotransposon, transferase; 1.8A {Homo sapiens} SCOP: d.151.1.1 PDB: 2v0s_A 2v0r_A

Probab=99.85  E-value=7.8e-21  Score=174.94  Aligned_cols=194  Identities=16%  Similarity=0.200  Sum_probs=116.1

Q ss_pred             CceeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhhhcCCcE
Q 013259           28 PCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVN  107 (447)
Q Consensus        28 ~~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~  107 (447)
                      .+|||+||||++.     .       .       ..|...+++.|++.+||||||||++.....+.     .+...||.+
T Consensus         6 ~~lri~t~Nv~g~-----~-------~-------~~~~~~~~~~i~~~~~DIv~LQE~~~~~~~~~-----~l~~~~y~~   61 (238)
T 1vyb_A            6 SHITILTLNINGL-----N-------S-------AIKRHRLASWIKSQDPSVCCIQETHLTCRDTH-----RLKIKGWRK   61 (238)
T ss_dssp             CCEEEEEEECSCC-----C-------S-------HHHHHHHHHHHHHHCCSEEEEECCCCCTTSGG-----GCCCTTCCE
T ss_pred             CcceEEEEecccC-----C-------c-------hhhHHHHHHHHHHcCCCEEEEecccCCCCCch-----hHhhCCCCe
Confidence            4699999999852     1       0       13567899999999999999999964432221     122347776


Q ss_pred             EEecCCCCCCceEEEEEecCCceEeeeEEEEecCCCCchhhhhhhcccccccccccCCCCCeEEEEEecccCCCCCCCch
Q 013259          108 FKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSL  187 (447)
Q Consensus       108 ~~~~~~~~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~v~n~HL~~~~~~~~~~  187 (447)
                      .+.........|+||++|.+ +++.... ... +...+   .+.         +.+...+..+.|+|+|+....    . 
T Consensus        62 ~~~~~~~~~~~Gvail~r~~-~~~~~~~-~~~-~~~~r---~i~---------~~~~~~~~~~~v~~~y~p~~~----~-  121 (238)
T 1vyb_A           62 IYQANGKQKKAGVAILVSDK-TDFKPTK-IKR-DKEGH---YIM---------VKGSIQQEELTILNIYAPNTG----A-  121 (238)
T ss_dssp             EEEECCSSSSCCEEEEECTT-CCCEEEE-EEE-CTTSS---EEE---------EEEEETTEEEEEEEEECCSSS----H-
T ss_pred             EEEccCCCCCceEEEEEeCC-CCccccc-eeE-cCCCc---EEE---------EEEEeCCCcEEEEEEecCCCC----c-
Confidence            54333333456999998766 3332111 111 11111   110         112235688999999984321    1 


Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCCch-------------h-HhhhhCCCcccccccccCCCCCCC
Q 013259          188 VRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHV-------------Y-KFLRSQGFVSSYDTAHQYTDADAH  253 (447)
Q Consensus       188 ~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~-------------~-~~l~~~g~~d~~~~~~~~~~~~~~  253 (447)
                        ..+...+.+.+.+.      .+.|+|||||||+.+.+..             + +.+...|+.|+|+..++.  ....
T Consensus       122 --~~~~~~l~~~l~~~------~~~~~Il~GDFN~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~~--~~~~  191 (238)
T 1vyb_A          122 --PRFIKQVLSDLQRD------LDSHTLIMGDFNTPLSTLDRSTRQKVNKDTQELNSALHQADLIDIYRTLHPK--STEY  191 (238)
T ss_dssp             --HHHHHHHHHHTTTT------CCTTEEEEEECSSCSSGGGBTTCCCCCHHHHHHHHHHHHTTEEEHHHHHCTT--CCCC
T ss_pred             --HHHHHHHHHHHHhc------cCCCEEEEccCCCCCCccccCCCCCCcHHHHHHHHHHhhCCCEEhhHhhCCC--CCce
Confidence              12333333333221      4679999999999765421             2 234466899998876543  2347


Q ss_pred             ceeecccCCCccccccceeccCcc
Q 013259          254 KWVSHRNHRGNICGVDFIWLLNPN  277 (447)
Q Consensus       254 tw~~~~~~~~~~~rIDyI~~~~~~  277 (447)
                      ||.....  +...||||||+++..
T Consensus       192 T~~~~~~--~~~~rID~i~~s~~~  213 (238)
T 1vyb_A          192 TFFSAPH--HTYSKIDHIVGSKAL  213 (238)
T ss_dssp             SEEETTT--TEEECCEEEEEEGGG
T ss_pred             eEEcCCC--CcccceEEEEeCHHH
Confidence            8876553  235699999997553

>2o3h_A DNA-(apurinic or apyrimidinic site) lyase; APE, endonuclease; 1.90A {Homo sapiens} PDB: 1bix_A 1dew_A* 1de8_B* 1de9_A* 2o3c_A

Probab=99.83  E-value=1.5e-20  Score=178.33  Aligned_cols=205  Identities=15%  Similarity=0.170  Sum_probs=116.1

Q ss_pred             CCCceeEEecccccccccCCCCCCCCCCCCCccCChhhHHHH-HHHHHhhCCCcEEEEcccccChhhHHHHHHHHhhhcC
Q 013259           26 QQPCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQR-ILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAG  104 (447)
Q Consensus        26 ~~~~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~-i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~g  104 (447)
                      ...+||||||||++..                     .+... |++.|.+.+||||||||++.....+...   +....|
T Consensus        25 ~~~~l~v~t~Ni~~~~---------------------~~~~~~i~~~i~~~~~DIi~LQE~~~~~~~~~~~---l~~~~g   80 (285)
T 2o3h_A           25 KPATLKIASWNVDGLR---------------------AWIKKKGLDWVKEEAPDILCLQETKCSENKLPAE---LQELPG   80 (285)
T ss_dssp             CBCCEEEEEEECSSHH---------------------HHHHTTHHHHHHHHCCSEEEEECCCCCTTSCCGG---GGGCGG
T ss_pred             CccceEEEEEecccCh---------------------hhhhhhHHHHHHhcCCCEEEEEEeecchhhccHH---HHhccC
Confidence            3457999999999531                     01222 8999999999999999996543222111   112357


Q ss_pred             C-cEEEec-CCCCCCceEEEEEecCCceEeeeEEEEecCC-CCchhhhhhhcccccccccccCCCCCeEEEEEecccCCC
Q 013259          105 Y-VNFKLA-RTNNRGDGLLTAVHKDYFRVVNYRDLLFNDF-GDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPH  181 (447)
Q Consensus       105 y-~~~~~~-~~~~~~~G~ai~~rs~~~~i~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~g~~l~v~n~HL~~~~  181 (447)
                      | ..++.. .......|+||++|...+.+..    .++.. .+.....+         .+    ..+.+.|+|+|+....
T Consensus        81 y~~~~~~~~~~~~g~~Gvailsr~~~~~~~~----~~~~~~~~~~~r~l---------~~----~~~~~~v~~~h~p~~~  143 (285)
T 2o3h_A           81 LSHQYWSAPSDKEGYSGVGLLSRQCPLKVSY----GIGDEEHDQEGRVI---------VA----EFDSFVLVTAYVPNAG  143 (285)
T ss_dssp             GCEEEEECBC--CCSCCEEEEESSCCSEEEE----SCSCGGGSSBCCEE---------EE----ECSSCEEEEEECCCCC
T ss_pred             CcEEEEecccCCcccceEEEEEccChHHeee----ccCCcccCCCCcEE---------EE----EeCCEEEEEEEcCCCC
Confidence            7 344333 2222335999996554333221    11100 00001100         01    1357999999984322


Q ss_pred             CC-CCchhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCC--------------------chh-HhhhhCCCcc
Q 013259          182 DS-SLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRG--------------------HVY-KFLRSQGFVS  239 (447)
Q Consensus       182 ~~-~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s--------------------~~~-~~l~~~g~~d  239 (447)
                      .. .....|..|+..+.+.++.+.     ...|+|||||||+.+..                    ..+ +.+...||.|
T Consensus       144 ~~~~~~~~r~~~~~~l~~~l~~~~-----~~~p~Il~GDFN~~~~~~D~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~D  218 (285)
T 2o3h_A          144 RGLVRLEYRQRWDEAFRKFLKGLA-----SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLAD  218 (285)
T ss_dssp             GGGTTHHHHHHHHHHHHHHHHHHH-----TTSCEEEEEECSCCCSGGGBSCTTTCTTSTTSCHHHHHHHHHHHHHTTCEE
T ss_pred             CcchhHHHHHHHHHHHHHHHHhhc-----cCCCEEEEEECCCCCchhhccChhhcCCCCCcCHHHHHHHHHHHhcCCCEE
Confidence            11 112236677777777777653     24799999999986421                    122 4444569999


Q ss_pred             cccccccCCCCCCCceeecccC---CCccccccceeccCcc
Q 013259          240 SYDTAHQYTDADAHKWVSHRNH---RGNICGVDFIWLLNPN  277 (447)
Q Consensus       240 ~~~~~~~~~~~~~~tw~~~~~~---~~~~~rIDyI~~~~~~  277 (447)
                      +|+..++.. ....||....+.   .....||||||+++..
T Consensus       219 ~~~~~~~~~-~~~~T~~~~~~~~~~~~~~~rID~i~~s~~~  258 (285)
T 2o3h_A          219 SFRHLYPNT-PYAYTFWTYMMNARSKNVGWRLDYFLLSHSL  258 (285)
T ss_dssp             HHHHHCTTC-CSCCSBCCSSTTHHHHTCCBCCEEEEECGGG
T ss_pred             EEEecCCCC-CCcEeEecCcCCccccCceeEEEEEEECHHH
Confidence            988765421 113677665421   0113589999997543

>1hd7_A DNA-(apurinic or apyrimidinic site) lyase; DNA repair, endonuclease, APE1, HAP1, REF-1; 1.95A {Homo sapiens} SCOP: d.151.1.1 PDB: 1e9n_A 3u8u_A 2isi_A

Probab=99.83  E-value=2.1e-20  Score=180.53  Aligned_cols=205  Identities=15%  Similarity=0.162  Sum_probs=113.2

Q ss_pred             CCCceeEEecccccccccCCCCCCCCCCCCCccCChhhHHH-HHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhhhcC
Q 013259           26 QQPCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQ-RILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAG  104 (447)
Q Consensus        26 ~~~~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~-~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~g  104 (447)
                      ....||||||||++..                     .+.. .|+++|...+||||||||+......+...+.   ...|
T Consensus        58 ~~~~lrv~t~Nv~g~~---------------------~~~~~~i~~~i~~~~~DIi~LQE~~~~~~~~~~~l~---~~~g  113 (318)
T 1hd7_A           58 KPATLKICSWNVDGLR---------------------AWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQ---ELPG  113 (318)
T ss_dssp             CBCCEEEEEEECSSHH---------------------HHHHTTHHHHHHHHCCSEEEEECCCCCC--------------C
T ss_pred             CCCceEEEEEecCcch---------------------hhhhhhHHHHHHhhCCCEEEEEEccCchhhccHHHH---hcCC
Confidence            3456999999999531                     0112 3899999999999999999654332222222   2357


Q ss_pred             C-cEEEec-CCCCCCceEEEEEecCCceEeeeEEEEecCC-CCchhhhhhhcccccccccccCCCCCeEEEEEecccCCC
Q 013259          105 Y-VNFKLA-RTNNRGDGLLTAVHKDYFRVVNYRDLLFNDF-GDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPH  181 (447)
Q Consensus       105 y-~~~~~~-~~~~~~~G~ai~~rs~~~~i~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~g~~l~v~n~HL~~~~  181 (447)
                      | ..++.. ....+..|+||++|..   +..... .++.. .+.....+         .+    ..+.+.|+|+|+....
T Consensus       114 y~~~~~~~~~~~~g~~Gvailsr~~---~~~~~~-~~~~~~~~~~~r~l---------~~----~~~~~~v~~vh~p~~~  176 (318)
T 1hd7_A          114 LSHQYWSAPSDKEGYSGVGLLSRQC---PLKVSY-GIGDEEHDQEGRVI---------VA----EFDSFVLVTAYVPNAG  176 (318)
T ss_dssp             CCEEEEECC-----CCCEEEEESSC---CSEEEE-SCSCGGGSSSSCEE---------EE----ECSSCEEEEEECCCCC
T ss_pred             CceEEEecCCCCCccceEEEEEcCC---ceeEEe-cCCCcccCCCCcEE---------EE----EcCCEEEEEEEcCCCC
Confidence            8 444433 1122335999995544   332211 11100 00101110         01    1257999999984322


Q ss_pred             CC-CCchhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCCc--------------------hh-HhhhhCCCcc
Q 013259          182 DS-SLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGH--------------------VY-KFLRSQGFVS  239 (447)
Q Consensus       182 ~~-~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~--------------------~~-~~l~~~g~~d  239 (447)
                      .. .....|..|+..|.+.+..+..     ..|+|||||||+.+.+.                    .+ ..+...||.|
T Consensus       177 ~~~~~~~~r~~~~~~l~~~l~~~~~-----~~pvIl~GDFN~~~~~~D~~~~~~~~~~~g~~~~~~~~~~~~ll~~~l~D  251 (318)
T 1hd7_A          177 RGLVRLEYRQRWDEAFRKFLKGLAS-----RKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLAD  251 (318)
T ss_dssp             GGGTTHHHHHHHHHHHHHHHHHHHH-----HSCEEEEEECSCCCSGGGBSCHHHHTTSTTSCHHHHHHHHHHHHHTTCEE
T ss_pred             CccccHHHHHHHHHHHHHHHHhccc-----CCCEEEEeeCCCCChhhhccChhhcCCCCCcCHHHHHHHHHHHhhCCCEE
Confidence            11 1123366777888887776543     26899999999876431                    12 4455669999


Q ss_pred             cccccccCCCCCCCceeecccC---CCccccccceeccCcc
Q 013259          240 SYDTAHQYTDADAHKWVSHRNH---RGNICGVDFIWLLNPN  277 (447)
Q Consensus       240 ~~~~~~~~~~~~~~tw~~~~~~---~~~~~rIDyI~~~~~~  277 (447)
                      +|+..++.. ....||....+.   .....||||||+++..
T Consensus       252 ~~r~~~p~~-~~~~T~~~~~~~~~~~~~~~rID~il~s~~~  291 (318)
T 1hd7_A          252 SFRHLYPNT-PYAYTFWTYMMNARSKNVGWRLDYFLLSHSL  291 (318)
T ss_dssp             HHHHHCTTC-TTCCSBCCSGGGHHHHTCCBCCEEEEECGGG
T ss_pred             eehhhCCCC-CCCcceECCcCCCcccCCceEEEEEEECHHH
Confidence            998765431 123677655421   1123589999997543

>2j63_A AP-endonuclease; base excision repair, lyase; 2.48A {Leishmania major}

Probab=99.83  E-value=6.7e-20  Score=184.32  Aligned_cols=228  Identities=14%  Similarity=0.088  Sum_probs=120.5

Q ss_pred             CCceeEEecccccccccCCCCCCCCCCCCCccCChhhH-HHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhh-hcC
Q 013259           27 QPCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGR-NQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLS-DAG  104 (447)
Q Consensus        27 ~~~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R-~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~-~~g  104 (447)
                      ...|||+||||++..            .      |..| ...|+++|.+.+||||||||++.....+..  ...+. ..|
T Consensus       147 ~~~LKI~TwNVnGl~------------~------~~kr~~~~i~~~I~~~~pDIVcLQEtk~~~~~~~~--~~~la~~~G  206 (467)
T 2j63_A          147 SRMYKFITWNVAGLR------------G------LLKKNASALRAFMEAEKPDVLCLQETKLNVDEADA--NATLGVVDG  206 (467)
T ss_dssp             TTEEEEEEEECSCHH------------H------HHHHCTTHHHHHHHHHCCSEEEEECCCCCTTCHHH--HHTSSCCTT
T ss_pred             CCCeEEEEEEcCCCc------------c------cccccHHHHHHHHHHcCCCEEEEEecccchhccch--HHHHhhcCC
Confidence            456999999998531            0      1111 157999999999999999999754433322  12233 358


Q ss_pred             CcEEEecCC-CCCCceEEEEEecCCce--Ee--eeEEEEecCCCCch---h------hhhhhcccccccccccCCCC---
Q 013259          105 YVNFKLART-NNRGDGLLTAVHKDYFR--VV--NYRDLLFNDFGDRV---A------QLLHVELIDPFSQCRNGDLR---  167 (447)
Q Consensus       105 y~~~~~~~~-~~~~~G~ai~~rs~~~~--i~--~~~~~~~~~~~~~~---~------~~~~l~~~~~~~~~~~~~~g---  167 (447)
                      |.+++.... .....|+|||+|...++  +.  ....+.++..+...   +      .....+  ..+..+.+...+   
T Consensus       207 Y~~~~~~~~~~~g~~GVAIlsR~pi~~~~l~~~~~~~~~~p~~~~~~~~~gs~~~~~~~~D~e--gR~I~a~~~~~g~~~  284 (467)
T 2j63_A          207 YSFVDHPCAFKRGYSGTRTYMKNSTTVKGLHARCTRGFALPSEPQADAAAGSRVLVEGAGDEE--GRVLTTFLSPDPDSA  284 (467)
T ss_dssp             EEEEEECCSSSTTSCCEEEEEECCCCCCTSCCEEEESSCCCCC-----------CCCCCCCTT--CCEEEEEECSSCCC-
T ss_pred             ceEEEecccCCCCcceEEEEEeCCccccccceeeeeccccccccccccccccccccccccCCC--CcEEEEEEEeCCccc
Confidence            877665432 23446999997765320  00  11111111100000   0      000000  001112333334   


Q ss_pred             ---CeEEEEEecccCCCC-CCCchhhHHHH-HHHHHHHHHHHHH--------------cCCCCCcEEEeecCCCccCCch
Q 013259          168 ---QEILIVNTHLLFPHD-SSLSLVRLHQV-YKILQHVESYQKE--------------HNLKPIPIILCGDWNGSKRGHV  228 (447)
Q Consensus       168 ---~~l~v~n~HL~~~~~-~~~~~~R~~q~-~~l~~~l~~~~~~--------------~~~~~~pvIl~GDFN~~p~s~~  228 (447)
                         ..|.|+|+|+..... ......|+.+. ..+.+++.++...              ....+.|+|||||||..|.+..
T Consensus       285 ~~~~~~~vinvYlP~~~~~~~r~~~K~~~~~~~L~~~l~~l~~~~~~~~~~r~~~a~g~~~~~~pvIL~GDFN~~p~~~D  364 (467)
T 2j63_A          285 SSSSRIALVNTYVANSGMGLTRLPYRVQSFDPSMREYLHRLDTWATENAAVPSAAAMGSGSSPHGFIWAGDLNVAERDYD  364 (467)
T ss_dssp             ---CCEEEEEEECCCCCTTSTTHHHHHHTHHHHHHHHHHHHHHHHTTTTC----------CCSCEEEEEEECCCCCSTTS
T ss_pred             ccCceEEEEEEECCCCCcchHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhhhcccccCCcEEEeccccCCCchhh
Confidence               789999998843221 11111232222 4455555554310              0013579999999998765321


Q ss_pred             -----------------------hHh-hhhCCCcccccccccCCCCCCCceeecccC---CCccccccceeccCcc
Q 013259          229 -----------------------YKF-LRSQGFVSSYDTAHQYTDADAHKWVSHRNH---RGNICGVDFIWLLNPN  277 (447)
Q Consensus       229 -----------------------~~~-l~~~g~~d~~~~~~~~~~~~~~tw~~~~~~---~~~~~rIDyI~~~~~~  277 (447)
                                             +.. |...||.|+|+..++... ..+||..++..   .+...||||||+++..
T Consensus       365 ~~~~~~~~~~~~~~gf~~~er~~~~~lL~~~gL~DafR~~~p~~~-~~yTw~s~r~~~~~~n~g~RIDyIlvS~~l  439 (467)
T 2j63_A          365 RYYAGTFKSMQECSGFAPEERMSFRETMQRTNSVDIFRQLYPQAG-PVYSFWSQRINGRPRNLGWRLDYFVVSSRL  439 (467)
T ss_dssp             BCCCSCHHHHTTSTTSCHHHHHHHHHHHHHTTEEEHHHHHCTTBC-SCCSBCCTTTTTTTTTCCBCCEEEEEEGGG
T ss_pred             hccccchhhcccccccCHHHHHHHHHHHhhCCCEEehHhhCCCCC-CCccccCCCCCcccCCCCceeEEEEEcHHH
Confidence                                   222 335689999988765321 23676655421   1235699999997653

>2a40_B Deoxyribonuclease-1; WAVE, WH2, WAsp, actin, DNAse I, ARP2/3, structural protein; HET: HIC NAG ATP; 1.80A {Bos taurus} SCOP: d.151.1.1 PDB: 1dnk_A* 2a3z_B* 2a41_B* 2a42_B* 2d1k_B* 2dnj_A* 3cjc_D* 3dni_A* 1atn_D*

Probab=99.80  E-value=9.8e-19  Score=163.80  Aligned_cols=205  Identities=15%  Similarity=0.140  Sum_probs=113.6

Q ss_pred             eeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhC--CCcEEEEcccccChhhHHHHHHHHhhh---cC
Q 013259           30 ITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYE--RSSIICLQEFWVGNEELVDMYEKRLSD---AG  104 (447)
Q Consensus        30 lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~--~~DII~LQEv~~~~~~~~~~l~~~l~~---~g  104 (447)
                      |||+||||+++.     .       .    .|  |...+++.|.+.  +|||||||||..........+...|..   .+
T Consensus         1 lrv~s~NI~~~g-----~-------~----~~--~~~~~~~~i~~~~~~~DIv~LQEv~~~~~~~~~~l~~~L~~~~~~~   62 (260)
T 2a40_B            1 LKIAAFNIRTFG-----E-------T----KM--SNATLASYIVRIVRRYDIVLIQEVRDSHLVAVGKLLDYLNQDDPNT   62 (260)
T ss_dssp             CEEEEEEEEEES-----H-------H----HH--HSHHHHHHHHHHHTTCSEEEEEEECCTTSHHHHHHHHHHTSSSTTS
T ss_pred             CEEEEEehhhhC-----C-------C----cc--chHHHHHHHHHHhccCCEEEEEEEEcCchhHHHHHHHHHHhccCCC
Confidence            699999999631     0       0    01  223444444442  899999999964322223344444532   34


Q ss_pred             CcEEEecCCC--CCCceEEEEEecCCceEeeeEEEEecCCCCchh-hhhhhcccccccccccCC-CCCeEEEEEecccCC
Q 013259          105 YVNFKLARTN--NRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVA-QLLHVELIDPFSQCRNGD-LRQEILIVNTHLLFP  180 (447)
Q Consensus       105 y~~~~~~~~~--~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~-~g~~l~v~n~HL~~~  180 (447)
                      |.++...+.+  ..+.+++++||+.++.+....  .++..+.... ......  .......... .+++|+|+|+||.+.
T Consensus        63 y~~v~~~~~~~~~~~~~~~~ly~~~~v~~~~~~--~~~~~~~~~~~~~~~R~--p~~~~~~~~~~~g~~~~vi~~Hl~~~  138 (260)
T 2a40_B           63 YHYVVSEPLGRNSYKERYLFLFRPNKVSVLDTY--QYDDGCESCGNDSFSRE--PAVVKFSSHSTKVKEFAIVALHSAPS  138 (260)
T ss_dssp             CEEEECCCBCSSSCCBEEEEEECTTTCEEEEEE--ECCTTSTTTHHHHCSSC--CEEEEEECTTSSSSEEEEEECCCCGG
T ss_pred             cEEEEcccCCCCCCcEEEEEEEcCceeEecCce--eccCCCcCCCCCceeeC--CEEEEEEeCCCCCceEEEEEecCCCC
Confidence            7766554332  245679999998888877653  3443211110 000000  0011122222 278999999999642


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccC---CchhHhh---hhCCCcccccccccCCCCCCCc
Q 013259          181 HDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKR---GHVYKFL---RSQGFVSSYDTAHQYTDADAHK  254 (447)
Q Consensus       181 ~~~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~---s~~~~~l---~~~g~~d~~~~~~~~~~~~~~t  254 (447)
                      .       +.+|++.+.+.+..+.+..  ++.|+|||||||+.+.   +..++.+   ...++...   ..   .....+
T Consensus       139 ~-------~~~q~~~l~~~~~~~~~~~--~~~~vil~GDfN~~~~~~~~~~~~~l~~~~~~~~~~~---~~---~~~~t~  203 (260)
T 2a40_B          139 D-------AVAEINSLYDVYLDVQQKW--HLNDVMLMGDFNADCSYVTSSQWSSIRLRTSSTFQWL---IP---DSADTT  203 (260)
T ss_dssp             G-------HHHHHHHHHHHHHHHHHHH--CCCCEEEEEECCCSTTTSCGGGGGGCHHHHSTTEEES---SC---TTCCCB
T ss_pred             C-------cHHHHHHHHHHHHHHHHhC--CCCCEEEEecCCCCCcccccchhhheeeeccCCceEc---cc---CCCCCc
Confidence            2       3456777777776654432  4679999999999887   6555543   33344311   00   011111


Q ss_pred             eeecccCCCccccccceeccCcc
Q 013259          255 WVSHRNHRGNICGVDFIWLLNPN  277 (447)
Q Consensus       255 w~~~~~~~~~~~rIDyI~~~~~~  277 (447)
                      +   .   +..++|||||+++..
T Consensus       204 ~---~---~~~~~lD~I~~s~~~  220 (260)
T 2a40_B          204 A---T---STNCAYDRIVVAGSL  220 (260)
T ss_dssp             S---S---SCCCCCEEEEEESHH
T ss_pred             c---c---CCCCCcccEEEcchH
Confidence            1   1   224689999997653

>1wdu_A TRAS1 ORF2P; four-layered alpha/beta sandwich, RNA binding protein; 2.40A {Bombyx mori} SCOP: d.151.1.1

Probab=99.80  E-value=4e-19  Score=164.87  Aligned_cols=190  Identities=14%  Similarity=0.103  Sum_probs=102.8

Q ss_pred             CCCceeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhhhcCC
Q 013259           26 QQPCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGY  105 (447)
Q Consensus        26 ~~~~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy  105 (447)
                      ....|||+||||+..            +         .+.+.++++|++.+||||||||++.......   .   ...||
T Consensus        16 ~~~~lri~s~Nv~~~------------~---------~~~~~l~~~i~~~~~DIv~lQE~~~~~~~~~---~---~~~gy   68 (245)
T 1wdu_A           16 NGPPYRVLQANLQRK------------K---------LATAELAIEAATRKAAIALIQEPYVGGAKSM---K---GFRGV   68 (245)
T ss_dssp             --CCEEEEEEECTTC------------H---------HHHHHHHHHHHHHTCSEEEEESCCC---------C---CCSSC
T ss_pred             cCcceeeeeeecccc------------H---------HHHHHHHHHHhhcCCCEEEEEcccccCCccc---c---CCCcc
Confidence            345799999999952            1         2467899999999999999999964322211   1   12478


Q ss_pred             cEEEecCCCCCCceEEEEEecCCceEeeeEEEEecCCCCchhhhhhhcccccccccccCCCCCeEEEEEecccCCCCCCC
Q 013259          106 VNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSL  185 (447)
Q Consensus       106 ~~~~~~~~~~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~v~n~HL~~~~~~~~  185 (447)
                      .++..........|+||+++++++++..     ++....+...           .+.+...++.+.|+|+|+....    
T Consensus        69 ~~~~~~~~~~~~~GvaIl~~~~~~~~~~-----~~~~~~~~~~-----------~~~i~~~~~~~~v~~vy~p~~~----  128 (245)
T 1wdu_A           69 RVFQSTAQGDGTVKAAIAVFDHDLDVIQ-----YPQLTTNNIV-----------VVGIRTRAWEITLVSYYFEPDK----  128 (245)
T ss_dssp             EEEECCCCTTCCCCEEEEECCSSCEEEE-----CTTTCCSSEE-----------EEEEECSSCEEEEEEEECCTTS----
T ss_pred             eEeccccccCCCCCeEEEEECCCcceEE-----ecccccCCEE-----------EEEEEcCCCcEEEEEEEeCCCC----
Confidence            7654332223356999998765577632     1111111111           0122234678999999984321    


Q ss_pred             chhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCCch-----------hHhhhhCCCcccccccccCCCCCCCc
Q 013259          186 SLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHV-----------YKFLRSQGFVSSYDTAHQYTDADAHK  254 (447)
Q Consensus       186 ~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~-----------~~~l~~~g~~d~~~~~~~~~~~~~~t  254 (447)
                      .  +.....    .+..+.+..  ...|+|||||||+.+....           .+.+...|+.    ..+   +...+|
T Consensus       129 ~--~~~~~~----~l~~~~~~~--~~~~~Ii~GDfN~~~~~~~~~~~~~~~~~l~~~~~~~~l~----~~~---~~~~~T  193 (245)
T 1wdu_A          129 P--IESYLE----QIKRVERKM--GPKRLIFGGDANAKSTWWGSKEDDARGDQLMGTLGELGLH----ILN---EGDVPT  193 (245)
T ss_dssp             C--SHHHHH----HHHHHHHTT--CSSSEEEEEECCCCCGGGTCSSCCHHHHHHHHHHHHHTCE----ECC---CSCCCS
T ss_pred             C--HHHHHH----HHHHHHHHh--CCCcEEEEeccccCcccCCCCCcCcchHHHHHHHHHCCcE----Eec---CCCCCc
Confidence            1  111222    222222222  4579999999999764211           1112222332    111   123467


Q ss_pred             eeecccCCCccccccceeccCcc
Q 013259          255 WVSHRNHRGNICGVDFIWLLNPN  277 (447)
Q Consensus       255 w~~~~~~~~~~~rIDyI~~~~~~  277 (447)
                      |..+........||||||+++..
T Consensus       194 ~~~~~~~~~~~~rID~i~~s~~~  216 (245)
T 1wdu_A          194 FDTIRGGKRYQSRVDVTFCTEDM  216 (245)
T ss_dssp             EEC-----CCEECCEEEEECGGG
T ss_pred             EECCCCCCCCCCEEEEEEeChHH
Confidence            77654311235799999997643

>2ei9_A Non-LTR retrotransposon R1BMKS ORF2 protein; four layered alpha beta sandwich, gene regulation; 2.00A {Bombyx mori}

Probab=99.71  E-value=2.7e-17  Score=151.94  Aligned_cols=172  Identities=8%  Similarity=0.058  Sum_probs=101.4

Q ss_pred             ceeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhhhcCCcEE
Q 013259           29 CITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNF  108 (447)
Q Consensus        29 ~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~  108 (447)
                      .|||+||||...            +         .|.+.++++|.+.+||||||||++.              ..||. +
T Consensus         7 ~mki~s~Nvn~~------------r---------~~~~~l~~~l~~~~~DIl~LQEt~~--------------~~gy~-~   50 (240)
T 2ei9_A            7 RLRIGQINLGGA------------E---------DATRELPSIARDLGLDIVLVQEQYS--------------MVGFL-A   50 (240)
T ss_dssp             EEEEEEEECTTC------------H---------HHHHTHHHHHHHHTCSEEEEESCCT--------------TSSSE-E
T ss_pred             cceEEEEecCcc------------H---------HHHHHHHHHHHHcCCCEEEeecceE--------------cCCce-E
Confidence            599999999952            1         2567799999999999999999931              12676 2


Q ss_pred             EecCCCCCCceEEEEEecCCceEeeeEEEEecCCCCchhhhhhhcccccccccccCCCCCeEEEEEecccCCCCCCCchh
Q 013259          109 KLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLV  188 (447)
Q Consensus       109 ~~~~~~~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~v~n~HL~~~~~~~~~~~  188 (447)
                       .   .....|+||+++++..++...     ....+.....           ..+  .+..++|+|+|+  |+.. ....
T Consensus        51 -~---~~~~~gvail~~~~~~~~~~~-----~~~~~~~~~~-----------i~i--~~~~i~i~svY~--P~~~-~~~~  105 (240)
T 2ei9_A           51 -Q---CGAHPKAGVYIRNRVLPCAVL-----HHLSSTHITV-----------VHI--GGWDLYMVSAYF--QYSD-PIDP  105 (240)
T ss_dssp             -C---CSSSCSEEEEESSTTSCEEEC-----GGGCCSSEEE-----------EEE--TTTTEEEEEEEC--CTTS-CSHH
T ss_pred             -e---ccCCCCEEEEEecCCcceeee-----cccCCCCEEE-----------EEE--eeccEEEEEEEc--CCCC-chhH
Confidence             1   224679999988754555321     1111111111           111  235799999977  3322 1122


Q ss_pred             hHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCCc----------------hhHhhhhCCCccccccc--ccCCCC
Q 013259          189 RLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGH----------------VYKFLRSQGFVSSYDTA--HQYTDA  250 (447)
Q Consensus       189 R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~----------------~~~~l~~~g~~d~~~~~--~~~~~~  250 (447)
                      +       .++++.+....  .+.|+|||||||+.+...                ..+.|  .++.++++..  ++  +.
T Consensus       106 ~-------~~~l~~l~~~~--~~~~~Ii~GDfN~~~~~w~~~~~~~~~~~~~r~~~~~~l--~~~~d~~~l~~~~~--~~  172 (240)
T 2ei9_A          106 Y-------LHRLGNILDRL--RGARVVICADTNAHSPLWHSLPRHYVGRGQEVADRRAKM--EDFIGARRLVVHNA--DG  172 (240)
T ss_dssp             H-------HHHHHHHHHHT--TTSCEEEEEECCCCCGGGTCCHHHHSSSCHHHHHHHHHH--HHHHHHTTCEECCC--TT
T ss_pred             H-------HHHHHHHHHhc--CCCcEEEEEecccccccccCCCCCCCCcchhhHHHHHHH--HHHHHhcCCEecCC--CC
Confidence            2       22333322221  246999999999976421                11122  1566666643  32  12


Q ss_pred             CCCceeecccCCCccccccceeccCcch
Q 013259          251 DAHKWVSHRNHRGNICGVDFIWLLNPNK  278 (447)
Q Consensus       251 ~~~tw~~~~~~~~~~~rIDyI~~~~~~~  278 (447)
                      ..+||..++.    ..||||+|+++...
T Consensus       173 ~~~T~~s~~~----~~rID~~l~s~~l~  196 (240)
T 2ei9_A          173 HLPTFSTANG----ESYVDVTLSTRGVR  196 (240)
T ss_dssp             CCCSEEETTE----EECCEEEEECTTCC
T ss_pred             CCceEeCCCC----ceEEEEEEecCccc
Confidence            3577876542    57999999987644

>2f1n_A CDT B, cytolethal distending toxin subunit B; E.coli, DNAse I, microbatch; 1.73A {Escherichia coli} SCOP: d.151.1.1

Probab=99.62  E-value=1.8e-16  Score=143.19  Aligned_cols=191  Identities=10%  Similarity=0.075  Sum_probs=109.0

Q ss_pred             CceeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCC-CcEEEEcccccC--------h---hhHHHH
Q 013259           28 PCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYER-SSIICLQEFWVG--------N---EELVDM   95 (447)
Q Consensus        28 ~~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~-~DII~LQEv~~~--------~---~~~~~~   95 (447)
                      ..+||||||+++..             .....+|.   ..|.+.|...+ +|||+|||+...        .   ..-.+ 
T Consensus        14 ~~~kV~TwNiqgs~-------------~~teskw~---~~v~~lI~~~~~~DIvaLQEag~~p~sa~~t~R~~~~~g~~-   76 (262)
T 2f1n_A           14 TDFRVATWNLQGAS-------------ATTESKWN---INVRQLISGENAVDILAVQEAGSPPSTAVDTGRVIPSPGIP-   76 (262)
T ss_dssp             GGCCEEEEEEEECT-------------TSCHHHHH---THHHHHHSSTTCCSEEEEEEECSCCTTCEECCCCCCCSSCC-
T ss_pred             ceeEEEEEEcCCCC-------------CCCccccc---ccHHHHHccCCCCCEEEEeecCCcCcccccccccccCCCcC-
Confidence            46999999999631             00111232   23556888877 999999999522        0   00011 


Q ss_pred             HHHHhhhcC------CcEEEecCC--CCCCceEEEEEecCCceEeeeEEEEecCCCCchhhhhhhcccccccccccCCCC
Q 013259           96 YEKRLSDAG------YVNFKLART--NNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLR  167 (447)
Q Consensus        96 l~~~l~~~g------y~~~~~~~~--~~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g  167 (447)
                      ..+.....|      +.|+|..+-  .....|+||+  |+ +++.  ..+.++.....  .       ++....++    
T Consensus        77 v~E~~w~lGt~srp~~~yiY~~~~D~~~~r~nlAIl--Sr-~~ad--ev~vLp~~~~~--~-------Rp~lgiri----  138 (262)
T 2f1n_A           77 VRELIWNLSTNSRPQQVYIYFSAVDALGGRVNLALV--SN-RRAD--EVFVLSPVRQG--G-------RPLLGIRI----  138 (262)
T ss_dssp             CEEEEEECCSSSSSCEEEEEEECSCSSSCSSCEEEE--ES-SCCS--EEEEECCSSTT--C-------CCEEEEEE----
T ss_pred             HHHHHHHhCCCCCCceEEEEEeeccCCCCceeeEEE--Ec-cccc--ceEECCCCCCC--C-------CceEEEEE----
Confidence            222233344      555555443  2345699999  76 6666  33434432211  1       11111122    


Q ss_pred             CeEEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHHHcCCCC-----CcEEEeecCCCccCCchhHhhhhCCCccccc
Q 013259          168 QEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKP-----IPIILCGDWNGSKRGHVYKFLRSQGFVSSYD  242 (447)
Q Consensus       168 ~~l~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~~~~~-----~pvIl~GDFN~~p~s~~~~~l~~~g~~d~~~  242 (447)
                      +.+.++|+|+.+..    ...|.+|+..+.+++...      +.     .|+||+||||..|.+...+++..  ....+.
T Consensus       139 ~~~~ff~tHa~a~~----g~da~a~v~~I~~~~~~~------~~~~~~~~pwii~GDFNr~P~sl~~~l~~~--~~~~~~  206 (262)
T 2f1n_A          139 GNDAFFTAHAIAMR----NNDAPALVEEVYNFFRDS------RDPVHQALNWMILGDFNREPADLEMNLTVP--VRRASE  206 (262)
T ss_dssp             TTEEEEEEECCSSS----SCSHHHHHHHHHHHHHTC------SSHHHHTCEEEEEEECSSCHHHHHTTSCHH--HHHTEE
T ss_pred             CCEEEEEEEecCCC----CccHHHHHHHHHHHHhcC------cccccCCCcEEEEecCCCCCcchhhhhhcc--cccceE
Confidence            35899999997753    233777877777776541      23     59999999999999887765432  111122


Q ss_pred             ccccCCCCCCCceeecccCCCccccccceeccCc
Q 013259          243 TAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNP  276 (447)
Q Consensus       243 ~~~~~~~~~~~tw~~~~~~~~~~~rIDyI~~~~~  276 (447)
                      ...    ++.+|+   .+    ..+|||+|+.++
T Consensus       207 ~~~----p~~~T~---~s----~~~LDY~~~~~~  229 (262)
T 2f1n_A          207 IIS----PAAATQ---TS----QRTLDYAVAGNS  229 (262)
T ss_dssp             EEC----CSSCSB---TT----SCCCEEEEEEES
T ss_pred             EcC----CCCCCC---CC----CCeEeEEEEcCC
Confidence            221    222332   11    347999998754

>1sr4_B CDT B, cytolethal distending toxin protein B; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi} SCOP: d.151.1.1 PDB: 2f2f_B

Probab=99.57  E-value=1.6e-15  Score=138.81  Aligned_cols=196  Identities=13%  Similarity=0.043  Sum_probs=100.9

Q ss_pred             ceeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhh-CCCcEEEEcccccChhh-HH-HHH-H-------
Q 013259           29 CITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLY-ERSSIICLQEFWVGNEE-LV-DMY-E-------   97 (447)
Q Consensus        29 ~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~-~~~DII~LQEv~~~~~~-~~-~~l-~-------   97 (447)
                      .+|||||||++..            ..+. .+   +...++++|.. .+||||+|||+...... .. ..+ +       
T Consensus         4 ~~kv~TwNi~g~~------------~~~~-~k---~~~~i~~~i~~~~~~DIlaLQEa~~~p~~~~~~~r~~~~~g~~v~   67 (261)
T 1sr4_B            4 DFKVATWNLQGSS------------AVNE-SK---WNINVRQLLSGEQGADILMVQEAGSLPSSAVRTSRVIQHGGTPIE   67 (261)
T ss_dssp             GSCEEEEECCCCS------------SSSH-HH---HHHHHHHHHCSTTCCSEEEEESCCSCCTTCEECSCCCCCSSSCCE
T ss_pred             ccEEEEEEcCCCC------------CCCh-hh---hhhHHHHHHcCCCCCCEEEEecCCCCCCccccchhhhcccCCchh
Confidence            6999999999620            1110 11   22368999999 78999999999532111 00 000 0       


Q ss_pred             HHhhhc------CCcEEEecC--CCCCCceEEEEEecCCceEeeeEEEEecC--CCCchhhhhhhcccccccccccCCCC
Q 013259           98 KRLSDA------GYVNFKLAR--TNNRGDGLLTAVHKDYFRVVNYRDLLFND--FGDRVAQLLHVELIDPFSQCRNGDLR  167 (447)
Q Consensus        98 ~~l~~~------gy~~~~~~~--~~~~~~G~ai~~rs~~~~i~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~g  167 (447)
                      +.+-..      ++.++|..+  .+....|+||+  || +++.+...+..+.  ...+...           .++  .++
T Consensus        68 e~~w~lg~~~r~~~~yiy~~~~d~~~g~~g~AIl--SR-~~~~~v~~l~~~~~~~~~R~~l-----------~i~--i~g  131 (261)
T 1sr4_B           68 EYTWNLGTRSRPNMVYIYYSRLDVGANRVNLAIV--SR-RQADEAFIVHSDSSVLQSRPAV-----------GIR--IGT  131 (261)
T ss_dssp             EEEEESSCSSSCCEEEEEEECCCTTTSCSCEEEE--ES-SCCSEEEEECCCCCSSCCCCEE-----------EEE--ETT
T ss_pred             hhhhhcccccCCCceEEEEEeecCCCCccceEEE--Ec-cchhceEEcCCCCCCCcCcceE-----------EEE--ECC
Confidence            000001      334444333  23345699999  66 4654433333222  1112111           111  223


Q ss_pred             CeEEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHHHcCCCC---CcEEEeecCCCccCCchhHhhhhCCCc-ccccc
Q 013259          168 QEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKP---IPIILCGDWNGSKRGHVYKFLRSQGFV-SSYDT  243 (447)
Q Consensus       168 ~~l~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~~~~~---~pvIl~GDFN~~p~s~~~~~l~~~g~~-d~~~~  243 (447)
                        +.|+++|+.+..    ...+..++..|.+++.....   .+.   .|+||+||||..|.+ ....|....+. ..+..
T Consensus       132 --~~f~s~Hl~~~~----~~ea~~~v~~I~~~~~~~~~---~~~~~~~~~ii~GDFN~~p~~-~~~~L~~~~~~~~~~~~  201 (261)
T 1sr4_B          132 --DVFFTVHALATG----GSDAVSLIRNIFTTFNSSSS---PPERRVYSWMVVGDFNRAPAN-LEVALRQEPAVSENTII  201 (261)
T ss_dssp             --EEEEEEECCTTT----TTTHHHHHHHHHHHHHC------CGGGGGCEEEEEEECSSCHHH-HHHHHTTSHHHHHTCEE
T ss_pred             --eEEEEeCCCCCC----CchHHHHHHHHHHHHHhccc---CCcccCCcEEEEeeCCCChhH-HHHHhhccccccceeEe
Confidence              999999996632    12355566665555543200   012   699999999999766 34444221001 01111


Q ss_pred             cccCCCCCCCceeecccCCCccccccceeccCcc
Q 013259          244 AHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPN  277 (447)
Q Consensus       244 ~~~~~~~~~~tw~~~~~~~~~~~rIDyI~~~~~~  277 (447)
                      ..    +..+|+++       ...||||++++..
T Consensus       202 ~~----p~~~T~~s-------~~~LDyi~~~~~~  224 (261)
T 1sr4_B          202 IA----PTEPTHRS-------GNILDYAILHDAH  224 (261)
T ss_dssp             EC----CSSCSBTT-------SCCCEEEEEECTT
T ss_pred             cC----CCcCcCCC-------CCcccEEEecCCC
Confidence            11    22334432       2469999997655

>2imq_X Salivary nitrophorin; ferrous heme, beta-sandwich, transport protein; HET: HEM; 1.30A {Cimex lectularius} SCOP: d.151.1.2 PDB: 1ntf_A* 1y21_A* 1yjh_A* 1si6_X*

Probab=99.49  E-value=2.8e-15  Score=141.61  Aligned_cols=170  Identities=11%  Similarity=0.024  Sum_probs=90.1

Q ss_pred             CceeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcE--EEEcccccCh------hhHHHHHHHH
Q 013259           28 PCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSI--ICLQEFWVGN------EELVDMYEKR   99 (447)
Q Consensus        28 ~~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DI--I~LQEv~~~~------~~~~~~l~~~   99 (447)
                      -.|+|+||||.+..     .       ...       ....+..+...+|||  |||||+....      ..+.+.+.+.
T Consensus         7 ~~i~V~T~Nv~~~~-----~-------~~~-------l~~wl~~~~~~~pDI~viglQEv~~~~~~~~~~~~w~~~l~~~   67 (282)
T 2imq_X            7 LSVHTVSWNSGHER-----A-------PTN-------LEELLGLNSGETPDVIAVAVQGFGFQTDKPQQGPACVKNFQSL   67 (282)
T ss_dssp             EEEEEEEEEEETCC-----C-------CSC-------CHHHHTCTTSCCCSEEEEEEEESCTTTCTTCCHHHHHHHHHHH
T ss_pred             cEEEEEEEeCCCCc-----C-------chh-------HHHHhcccccCCCCEEEEEeeeeccccccchhhHHHHHHHHHh
Confidence            46999999998631     0       111       122222244678996  5999996432      1345667777


Q ss_pred             hhhcCCcEEEecCCCCCCceEEEEEecCCceEeeeEEEE-ecC-CCCchhhhhhhcccccccccccCCCCCeEEEEEecc
Q 013259          100 LSDAGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLL-FND-FGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHL  177 (447)
Q Consensus       100 l~~~gy~~~~~~~~~~~~~G~ai~~rs~~~~i~~~~~~~-~~~-~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~v~n~HL  177 (447)
                      |..++|..+........+..++|++|...++.+...... +.. .+.+.+           +..++...+..|+++|+||
T Consensus        68 L~~~~Y~~v~~~~~~~~G~~l~vf~k~~~~~~i~~~~~~~~~g~~g~kGa-----------v~~r~~~~~~~~~fvn~HL  136 (282)
T 2imq_X           68 LTSKGYTKLKNTITETMGLTVYCLEKHLDQNTLKNETIIVTVDDQKKSGG-----------IVTSFTIYNKRFSFTTSRM  136 (282)
T ss_dssp             HHHTTEEEEEEEECSSEEEEEEEEGGGCCTTTCCCEEEEEECSTTSCSEE-----------EEEEEEETTEEEEEEEEEC
T ss_pred             cCCCceEEEEeccCceeEEEEEEEEccccCccceeeeeccccccccCCce-----------EEEEEEECCEEEEEEEECC
Confidence            776666655431112223344555454433333322221 111 011111           1123334578999999999


Q ss_pred             cCCCCCCCchhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccC---CchhHhhhh
Q 013259          178 LFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKR---GHVYKFLRS  234 (447)
Q Consensus       178 ~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~---s~~~~~l~~  234 (447)
                      .+...  ....|..++..+.+.+...     ....|+|+|||||..++   +.+.+.+..
T Consensus       137 ~~~~~--~~~~R~~~~~~I~~~~~~~-----~~~~~vi~~GDfN~r~~~~~~~~~~~i~~  189 (282)
T 2imq_X          137 SDEDV--TSTNTKYAYDTRLDYSKKD-----DPSDFLFWIGDLNVRVETNATHAKSLVDQ  189 (282)
T ss_dssp             CTTCC--CTTSSSSSCCGGGCTTSSS-----SCCSEEEEEEECSCCBCSCHHHHHHHHHT
T ss_pred             CCCCc--hHHHHHHHHHHHHHhhhcc-----CccceEEEecccccccCCCHHHHHHHHhh
Confidence            77421  1234555666555443221     24568999999997655   334444433

>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}

Probab=99.49  E-value=3e-14  Score=112.57  Aligned_cols=66  Identities=23%  Similarity=0.374  Sum_probs=61.6

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ....+++++|+.||+|++ |+|+.+||+.+|+.+|     ..+++++++.+|+.+|.|+||.|+|+||+++|
T Consensus        33 ~~~~el~~~F~~~D~d~~-G~I~~~El~~~l~~lg-----~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m   98 (100)
T 2lv7_A           33 DELEEIREAFKVFDRDGN-GFISKQELGTAMRSLG-----YMPNEVELEVIIQRLDMDGDGQVDFEEFVTLL   98 (100)
T ss_dssp             GGHHHHHHHHHHTCSSCS-SCBCHHHHHHHHHHHT-----CCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHT
T ss_pred             HHHHHHHHHHHHHcCCCC-CcCCHHHHHHHHHHhC-----CCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHh
Confidence            455678999999999999 9999999999999999     88999999999999999999999999999654

>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A

Probab=99.36  E-value=9.7e-13  Score=103.58  Aligned_cols=69  Identities=13%  Similarity=0.122  Sum_probs=60.6

Q ss_pred             HhhhhhHHHHhhhhc-CCCCCCcccHHHHHHHHHH-----hccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          300 RRASLTETDAFAFLK-ADNDGDYITYSGFCEALEQ-----LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D-~~~~~G~i~~~el~~~l~~-----~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      .....+|+++|+.|| +|++.|+|+.+||+.+|+.     +|     ..++++++++||+++|.|+||.|+|+||+.+|.
T Consensus         6 e~~i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg-----~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~   80 (101)
T 3nso_A            6 EQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTP-----TEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLA   80 (101)
T ss_dssp             HHHHHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCC-----CTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcC-----CCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHH
Confidence            455678999999998 7874499999999999986     45     778999999999999999999999999997663

>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C

Probab=99.33  E-value=3.4e-12  Score=109.88  Aligned_cols=71  Identities=17%  Similarity=0.389  Sum_probs=64.8

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCC--CCCceeehHHHHHHHhccCcc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADI--DGNGVVDYKEFQQRIWKTTWS  378 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~--~~~g~i~~~EF~~~~~~~~~~  378 (447)
                      ....++++|+.||+|++ |+|+.+||+.+|..+|     .++++++++.||+.+|.  |+||.|+|+||+++|+.....
T Consensus        83 ~~~~l~~aF~~fD~d~~-G~I~~~el~~~l~~~g-----~~ls~~e~~~l~~~~D~~~d~dG~I~~~EF~~~m~~~p~p  155 (159)
T 3i5g_C           83 AADEFMEAFKTFDREGQ-GLISSAEIRNVLKMLG-----ERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVMAGPFP  155 (159)
T ss_dssp             CHHHHHHHHHHHCTTSS-SEECHHHHHHHHHHSS-----SCCCHHHHHHHHHHTTCCCCSSCCEEHHHHHHHHHHCSCC
T ss_pred             hHHHHHHHHHHHhcCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCcCCCCCCeEeHHHHHHHHHCCCCC
Confidence            34579999999999999 9999999999999999     89999999999999995  889999999999988876554

>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A

Probab=99.31  E-value=4.1e-12  Score=107.85  Aligned_cols=66  Identities=27%  Similarity=0.484  Sum_probs=61.8

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ....++.+|+.||+|++ |+|+.+||+.+|..+|     ..+++++++.+|+.+|.|+||.|+|+||+++|.
T Consensus        81 ~~~~l~~aF~~~D~d~~-G~I~~~El~~~l~~~g-----~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~m~  146 (148)
T 2lmt_A           81 TEEEMREAFKIFDRDGD-GFISPAELRFVMINLG-----EKVTDEEIDEMIREADFDGDGMINYEEFVWMIS  146 (148)
T ss_dssp             THHHHHHHHHHHHSSCS-SEECHHHHHHHHHHHT-----CCCCHHHHHHHHHHHCCSCCSSEEHHHHHHHHT
T ss_pred             cHHHHHHHHHHHCCCCc-CcCcHHHHHHHHHHcC-----ccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence            34578999999999999 9999999999999999     889999999999999999999999999997664

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}

Probab=99.30  E-value=7.7e-12  Score=97.52  Aligned_cols=68  Identities=31%  Similarity=0.510  Sum_probs=62.7

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ......++++|+.||+|++ |+|+.+||+.+|+.+|     ..+++++++.+++.+|.|++|.|+|+||+..+.
T Consensus        25 ~~~~~~l~~~F~~~D~d~~-G~I~~~El~~~l~~~g-----~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~   92 (94)
T 2kz2_A           25 TDSEEEIREAFRVEDKDGN-GYISAAELRHVMTNLG-----EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT   92 (94)
T ss_dssp             CSCHHHHHHHHHHHCTTCC-SCBCHHHHHHHHHHHT-----CCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHCCCCc-CcCCHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            3456789999999999999 9999999999999999     889999999999999999999999999997653

>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6

Probab=99.29  E-value=6.1e-12  Score=97.67  Aligned_cols=64  Identities=20%  Similarity=0.303  Sum_probs=59.3

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ....++++|+.||+|++ |+|+.+||+.+|+.+|       ++++++++++..+|.|+||.|+|+||+.+|.
T Consensus         7 ~~~~~~~~F~~~D~d~d-G~I~~~el~~~l~~~g-------~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~   70 (92)
T 1fi6_A            7 QRQYYVNQFKTIQPDLN-GFIPGSAAKEFFTKSK-------LPILELSHIWELSDFDKDGALTLDEFCAAFH   70 (92)
T ss_dssp             HHHHHHHHHTTTCCSTT-CEEEHHHHHHHHHHHS-------SCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHcC-------CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence            45678999999999999 9999999999999988       7899999999999999999999999997664

>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A

Probab=99.29  E-value=3.9e-12  Score=102.23  Aligned_cols=69  Identities=17%  Similarity=0.200  Sum_probs=61.0

Q ss_pred             HhhhhhHHHHhhhhc-CCCCCC-cccHHHHHHHHHH-----hccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          300 RRASLTETDAFAFLK-ADNDGD-YITYSGFCEALEQ-----LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D-~~~~~G-~i~~~el~~~l~~-----~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ......++++|+.|| +|++ | +|+.+||+.+|+.     +|     ..++++++++||+.+|.|+||.|+|+||+.+|
T Consensus        18 ~~~~~~l~~aF~~fD~~dgd-GG~Is~~EL~~~l~~~l~~~lg-----~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m   91 (113)
T 2lnk_A           18 EKALDVMVSTFHKYSGKEGD-KFKLNKSELKELLTRELPSFLG-----KRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFL   91 (113)
T ss_dssp             HHHHHHHHHHHHHTTTTTSC-TTCBCHHHHHHHHHHHCGGGGT-----TCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHcccCCC-CCEECHHHHHHHHHHHcchhcC-----CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence            345668999999999 8999 7 9999999999986     66     67899999999999999999999999999766


Q ss_pred             hc
Q 013259          373 WK  374 (447)
Q Consensus       373 ~~  374 (447)
                      ..
T Consensus        92 ~~   93 (113)
T 2lnk_A           92 SC   93 (113)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5

Probab=99.29  E-value=6.7e-12  Score=90.83  Aligned_cols=62  Identities=21%  Similarity=0.400  Sum_probs=58.9

Q ss_pred             hHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          305 TETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       305 ~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .++++|+.+|+|++ |+|+.+||+.++..+|     ..+++++++.++..+|.|++|.|+|+||+..+
T Consensus         2 ~l~~~F~~~D~d~~-G~i~~~el~~~l~~~~-----~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~   63 (67)
T 1tiz_A            2 SAKRVFEKFDKNKD-GKLSLDEFREVALAFS-----PYFTQEDIVKFFEEIDVDGNGELNADEFTSCI   63 (67)
T ss_dssp             THHHHHHHHCTTSS-SCEEHHHHHHHHHHTC-----TTSCHHHHHHHHHHHCCSSSSEECHHHHHHHH
T ss_pred             HHHHHHHHHCCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHH
Confidence            57889999999999 9999999999999999     88999999999999999999999999999665

>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}

Probab=99.29  E-value=8.5e-13  Score=128.11  Aligned_cols=121  Identities=15%  Similarity=0.231  Sum_probs=96.9

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhcc----
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT----  375 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~----  375 (447)
                      .++..+|+++|+.||+|++ |+|+.+||+.+|+.+|     ..+++++++++|+.+|.|+||.|+|+||+..+...    
T Consensus       298 ~EEI~ELREaF~~fDkDgd-G~IS~eELk~aLrsLG-----~~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~~  371 (440)
T 3u0k_A          298 EEQIAEFKEAFSLFDKDGD-GTITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDT  371 (440)
T ss_dssp             HHHHHHHHHHHHHHCTTCS-SEECHHHHHHHHHHTT-----CCCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHTC----
T ss_pred             HHHHHHHHHHHHHHcCCCC-CEECHHHHHHHHHHcC-----CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCC
Confidence            4567799999999999999 9999999999999999     88999999999999999999999999999766432    


Q ss_pred             -------CcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          376 -------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       376 -------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                             ..|...|.+..|.++.+|.......+|..++...     +..  ....+|.+.||.++
T Consensus       372 d~eeeLreAFk~fDkDgdG~IS~eELr~vL~~lGe~LSdeE-----Ide--Lfke~D~DgDGkIs  429 (440)
T 3u0k_A          372 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE-----VDE--MIREADIDGDGQVN  429 (440)
T ss_dssp             --CHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHH-----HHH--HHHHHCTTCSSSEE
T ss_pred             ChHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHH-----HHH--HHHHhCCCCCCcEe
Confidence                   1244567777788887777666666776554433     222  34567889999875

>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*

Probab=99.28  E-value=6e-12  Score=97.77  Aligned_cols=73  Identities=16%  Similarity=0.135  Sum_probs=58.4

Q ss_pred             HhhhhhHHHHhhhhc-CCCCCCcccHHHHHHHHHH-hccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          300 RRASLTETDAFAFLK-ADNDGDYITYSGFCEALEQ-LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D-~~~~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ......++++|+.|| +|+++|+|+.+||+.+|+. +|-. ...++++++++++|+.+|.|+||.|+|+||+.+|.
T Consensus         6 e~~~~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~-l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~   80 (93)
T 4eto_A            6 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSF-LGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLS   80 (93)
T ss_dssp             HHHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGG-C---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhh-ccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHH
Confidence            456678999999998 5773289999999999986 5500 00456899999999999999999999999997663

>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7

Probab=99.28  E-value=1.2e-11  Score=98.35  Aligned_cols=79  Identities=16%  Similarity=0.280  Sum_probs=68.3

Q ss_pred             HHHhHHHHHHHhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHH
Q 013259          290 AVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ  369 (447)
Q Consensus       290 ~v~~~~~~~~~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~  369 (447)
                      .+...+...+......++.+|+.||+|++ |+|+.+||+.+|..+|     ..+++++++.++..+|.|++|.|+|+||+
T Consensus        10 ~~~~~l~~~~~~~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~g-----~~~~~~e~~~l~~~~d~~~~g~i~~~eF~   83 (105)
T 1wlz_A           10 DILARLHKAVTSHYHAITQEFENFDTMKT-NTISREEFRAICNRRV-----QILTDEQFDRLWNEMPVNAKGRLKYPDFL   83 (105)
T ss_dssp             HHHHHHHHHHHHTHHHHHHHHHHHCTTCS-SCBCHHHHHHHHHHHT-----CCCCHHHHHHHHTTSCBCTTSCBCHHHHH
T ss_pred             HHHHHHHHHHHchHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHcCCCCCCCCcHHHHH
Confidence            34444444555567789999999999999 9999999999999999     88999999999999999999999999999


Q ss_pred             HHHhc
Q 013259          370 QRIWK  374 (447)
Q Consensus       370 ~~~~~  374 (447)
                      ..+..
T Consensus        84 ~~~~~   88 (105)
T 1wlz_A           84 SRFSS   88 (105)
T ss_dssp             HHHC-
T ss_pred             HHHhc
Confidence            76644

>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}

Probab=99.27  E-value=7.5e-12  Score=98.50  Aligned_cols=68  Identities=16%  Similarity=0.147  Sum_probs=60.6

Q ss_pred             HhhhhhHHHHhhhhc-CCCCCC-cccHHHHHHHHHH-----hccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          300 RRASLTETDAFAFLK-ADNDGD-YITYSGFCEALEQ-----LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D-~~~~~G-~i~~~el~~~l~~-----~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ......++++|+.|| +|++ | +|+.+||+.+|+.     +|     ..+++++++.+|+.+|.|+||.|+|+||+.+|
T Consensus         6 ~~~~~~l~~~F~~fDd~dg~-gG~I~~~El~~~l~~~~~~~lg-----~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~   79 (99)
T 2y5i_A            6 EGAMDALITVFHNYSGSEGD-KYKLSKGELKELLNAELTDFLM-----SQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLV   79 (99)
T ss_dssp             HHHHHHHHHHHHHHHTSSSS-TTEECHHHHHHHHHHHSGGGGT-----TSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccCCC-cCcCCHHHHHHHHHHHhhhhcc-----ccccHHHHHHHHHHHCCCCCCcCcHHHHHHHH
Confidence            345678999999998 8998 7 9999999999987     56     67899999999999999999999999999766


Q ss_pred             h
Q 013259          373 W  373 (447)
Q Consensus       373 ~  373 (447)
                      .
T Consensus        80 ~   80 (99)
T 2y5i_A           80 A   80 (99)
T ss_dssp             H
T ss_pred             H
Confidence            3

>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6

Probab=99.27  E-value=4.8e-12  Score=99.63  Aligned_cols=67  Identities=21%  Similarity=0.258  Sum_probs=61.6

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ......++++|+.||+|++ |+|+.+||+.+|+.+|       ++++++++++..+|.|+||.|+|+||+.+|..
T Consensus         7 ~~~~~~~~~~F~~~D~d~d-G~Is~~el~~~l~~~~-------l~~~~l~~i~~~~D~d~dG~i~~~EF~~~~~~   73 (99)
T 1qjt_A            7 SSGNPVYEKYYRQVEAGNT-GRVLALDAAAFLKKSG-------LPDLILGKIWDLADTDGKGVLSKQEFFVALRL   73 (99)
T ss_dssp             TTTCTHHHHHHHHHCCTTS-SCCCSHHHHHHHHTSS-------SCHHHHHHHHHHHCCSSSSSCCSHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHCCCCC-CcCCHHHHHHHHHHcC-------CCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH
Confidence            4567789999999999999 9999999999999988       78999999999999999999999999977743

>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}

Probab=99.27  E-value=1.7e-12  Score=105.51  Aligned_cols=66  Identities=20%  Similarity=0.223  Sum_probs=59.6

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHH-----hccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQ-----LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~-----~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ......|..+|+.||.| + |+||.+||+.+|+.     +|     ...+++++++||+.+|.|+||+|+|+||+.+|
T Consensus        11 E~~ie~l~~~F~~yd~d-d-G~Is~~EL~~~l~~~~~~~l~-----~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm   81 (121)
T 4drw_A           11 EHAMETMMFTFHKFAGD-K-GYLTKEDLRVLMEKEFPGFLE-----NQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLI   81 (121)
T ss_dssp             HHHHHHHHHTTGGGSCT-T-CSCCHHHHHHHTTTSCHHHHT-----TSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCC-C-CEEcHHHHHHHHHHHhhhhcc-----cCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHH
Confidence            34567889999999988 8 99999999999986     67     77899999999999999999999999999766

>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}

Probab=99.27  E-value=9.2e-12  Score=98.64  Aligned_cols=73  Identities=16%  Similarity=0.130  Sum_probs=59.4

Q ss_pred             HhhhhhHHHHhhhhc-CCCCCCcccHHHHHHHHHH-hccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          300 RRASLTETDAFAFLK-ADNDGDYITYSGFCEALEQ-LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D-~~~~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      .....+|+++|+.|| .|++.|+|+.+||+.+|+. +|-. -...++++++++||+++|.|+||.|+|+||+.+|.
T Consensus         9 e~~~~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~-l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~   83 (104)
T 3zwh_A            9 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSW-LGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLS   83 (104)
T ss_dssp             HHHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGG-SCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchh-ccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHH
Confidence            456678999999998 6773279999999999986 5400 00457899999999999999999999999997663

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}

Probab=99.26  E-value=1e-11  Score=92.67  Aligned_cols=66  Identities=20%  Similarity=0.366  Sum_probs=61.3

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ....++.+|+.+|+|++ |+|+.+||+.+|+.+|     ..+++++++.++..+|.|++|.|+|+||+..+.
T Consensus         5 ~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~   70 (77)
T 2joj_A            5 QKQEIKEAFDLFDTNKT-GSIDYHELKVAMRALG-----FDVKKPEILELMNEYDREGNGYIGFDDFLDIMT   70 (77)
T ss_dssp             HHHHHHHHHHHHCCSSS-SEEEHHHHHHHHHHHT-----CCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHT
T ss_pred             HHHHHHHHHHHhCCCCC-CCCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence            45678999999999999 9999999999999999     889999999999999999999999999997653

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}

Probab=99.26  E-value=6.1e-12  Score=92.23  Aligned_cols=65  Identities=29%  Similarity=0.412  Sum_probs=60.6

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ....++.+|+.+|.|++ |+|+.+||+.+|..+|     ..+++++++.++..+|.|++|.|+|+||+..+
T Consensus         4 ~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~~-----~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~   68 (71)
T 2b1u_A            4 GLEDLQVAFRAFDQDGD-GHITVDELRRAMAGLG-----QPLPQEELDAMIREADVDQDGRVNYEEFARML   68 (71)
T ss_dssp             THHHHHHHHTTSCCSSS-SEEEHHHHHHHGGGTT-----CSSCHHHHHHHHHHCCSSSSSEEETTHHHHHH
T ss_pred             cHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            34678999999999999 9999999999999999     88999999999999999999999999999655

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A

Probab=99.26  E-value=1e-12  Score=110.82  Aligned_cols=119  Identities=13%  Similarity=0.172  Sum_probs=92.1

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc-------
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK-------  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~-------  374 (447)
                      ....++++|..||+|++ |+|+.+||+.+|+.+|     ..+++++++.++..+|.|++|.|+|+||+..+..       
T Consensus         4 ~~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~   77 (143)
T 2obh_A            4 QKQEIREAFDLFDADGT-GTIDVKELKVAMRALG-----FEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDT   77 (143)
T ss_dssp             HHHHHHHHHHTTCTTCC-SEEEGGGHHHHHHHTT-----CCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHcC-----CCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHHHHhccccH
Confidence            45678999999999999 9999999999999999     8899999999999999999999999999976632       


Q ss_pred             ----cCcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          375 ----TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       375 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                          ...+...|.+..|.+...|.......+|..++...     +..  ....+|.+.+|.++
T Consensus        78 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~-----~~~--~~~~~D~d~dG~I~  133 (143)
T 2obh_A           78 KEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEE-----LQE--MIDEADRDGDGEVS  133 (143)
T ss_dssp             HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHH-----HHH--HHHHHCTTSSSSBC
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHH-----HHH--HHHHhCCCCCCcEe
Confidence                22345567777787877776555555564433322     222  33467888888875

>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A

Probab=99.26  E-value=7.1e-12  Score=97.89  Aligned_cols=67  Identities=10%  Similarity=0.126  Sum_probs=60.2

Q ss_pred             hhhhhHHHHhhhhc-CCCCCC-cccHHHHHHHHHH-----hccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          301 RASLTETDAFAFLK-ADNDGD-YITYSGFCEALEQ-----LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       301 ~~~~~l~~~F~~~D-~~~~~G-~i~~~el~~~l~~-----~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      .....++++|+.|| +|++ | +|+.+||+.+|+.     +|     ..+++++++++|+.+|.|+||.|+|+||+.+|.
T Consensus         9 ~~~~~l~~~F~~fD~~dg~-gg~I~~~El~~~l~~~~~~~lg-----~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~   82 (95)
T 2wcb_A            9 EHLEGIVNIFHQYSVRKGH-FDTLSKGELKQLLTKELANTIK-----NIKDKAVIDEIFQGLDANQDEQVDFQEFISLVA   82 (95)
T ss_dssp             HHHHHHHHHHHHHHTSSSS-TTEEEHHHHHHHHHHHTHHHHH-----HCCCHHHHHHHHTTSSSSTTSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCC-CCccCHHHHHHHHHHHhhhhcc-----ccccHHHHHHHHHHHcCCCCCcCcHHHHHHHHH
Confidence            44668999999999 8999 7 9999999999986     67     678999999999999999999999999997663

>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=99.25  E-value=7.1e-12  Score=97.94  Aligned_cols=65  Identities=14%  Similarity=0.199  Sum_probs=59.5

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ....++++|+.||+|++ |+|+.+||+.+|+.+|       ++++++++++..+|.|+||.|+|+||+.+|..
T Consensus         8 ~~~~~~~~F~~~D~d~d-G~I~~~el~~~l~~~g-------~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~   72 (95)
T 1c07_A            8 EKAKYDEIFLKTDKDMD-GFVSGLEVREIFLKTG-------LPSTLLAHIWSLCDTKDCGKLSKDQFALAFHL   72 (95)
T ss_dssp             HHHHHHHHHHHHCTTCS-SEECHHHHHHHHHTTT-------CCHHHHHHHHHHHCTTCSSSEETTTHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCC-CcEeHHHHHHHHHHcC-------CCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH
Confidence            45678999999999999 9999999999999988       78999999999999999999999999976633

>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...

Probab=99.25  E-value=1.3e-11  Score=95.82  Aligned_cols=67  Identities=19%  Similarity=0.285  Sum_probs=60.1

Q ss_pred             HhhhhhHHHHhhhhcCCCCCC---cccHHHHHHHHHH-----hccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHH
Q 013259          300 RRASLTETDAFAFLKADNDGD---YITYSGFCEALEQ-----LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQR  371 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G---~i~~~el~~~l~~-----~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~  371 (447)
                      ......++++|+.|| +++ |   +|+.+||+.+|+.     +|     ..+++++++++|+.+|.|+||.|+|+||+.+
T Consensus         5 e~~~~~l~~~F~~~D-~~d-G~~g~Is~~EL~~~l~~~~~~~lg-----~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~   77 (92)
T 3rm1_A            5 EKAVVALIDVFHQYS-GRE-GDKHKLKKSELKELINNELSHFLE-----EIKEQEVVDKVMETLDSNGDGECDFQEFMAF   77 (92)
T ss_dssp             HHHHHHHHHHHHHHH-TSS-SSTTSBCHHHHHHHHHHHCTTTSC-----CCCSHHHHHHHHHHHCTTSSSSBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHc-cCC-CCcCeECHHHHHHHHHHHhhhhcc-----CcccHHHHHHHHHHHcCCCCCCCcHHHHHHH
Confidence            345678999999999 776 6   9999999999999     88     8899999999999999999999999999966


Q ss_pred             Hh
Q 013259          372 IW  373 (447)
Q Consensus       372 ~~  373 (447)
                      |.
T Consensus        78 ~~   79 (92)
T 3rm1_A           78 VA   79 (92)
T ss_dssp             HH
T ss_pred             HH
Confidence            63

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A

Probab=99.25  E-value=1.8e-11  Score=94.42  Aligned_cols=68  Identities=22%  Similarity=0.337  Sum_probs=62.8

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ......++.+|..+|+|++ |+|+.+||+.+|+.+|     ..+++++++.++..+|.|++|.|+|+||+..+.
T Consensus        16 ~~~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~   83 (90)
T 1avs_A           16 EEMIAEFKAAFDMFDADGG-GDISTKELGTVMRMLG-----QNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMV   83 (90)
T ss_dssp             HHHHHHHHHHHHHHCTTCS-SEECHHHHHHHHHHTT-----CCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence            4456788999999999999 9999999999999999     889999999999999999999999999997664

>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A

Probab=99.24  E-value=8.8e-12  Score=97.36  Aligned_cols=69  Identities=20%  Similarity=0.277  Sum_probs=55.3

Q ss_pred             HhhhhhHHHHhhhhc-CCCCCCcccHHHHHHHHHH-----hccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          300 RRASLTETDAFAFLK-ADNDGDYITYSGFCEALEQ-----LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D-~~~~~G~i~~~el~~~l~~-----~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ......++++|+.|| +|+++|+|+.+||+.+|+.     +|     ..+++++++++|+.+|.|+||.|+|+||+.+|.
T Consensus         5 ~~~~~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg-----~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~   79 (95)
T 1j55_A            5 ETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQ-----SGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVA   79 (95)
T ss_dssp             HHHHHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC-----------CHHHHHHHHHCSSSSSSEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcc-----cccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHH
Confidence            345678999999999 7883289999999999987     45     668889999999999999999999999997663

>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B

Probab=99.23  E-value=4.6e-12  Score=108.31  Aligned_cols=66  Identities=21%  Similarity=0.394  Sum_probs=61.0

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ....|+++|+.||+|++ |+|+.+||+.+|..+|     .++++++++.||+.+|.+ ||.|+|+||+++|..
T Consensus        83 ~~~~l~~aF~~fD~d~~-G~I~~~el~~~l~~~g-----~~ls~~ei~~~~~~~D~~-dG~I~y~EF~~~m~~  148 (153)
T 3i5g_B           83 PEDALRNAFSMFDEDGQ-GFIPEDYLKDLLENMG-----DNFSKEEIKNVWKDAPLK-NKQFNYNKMVDIKGK  148 (153)
T ss_dssp             CHHHHHHHHHTTCSSCS-SCCCHHHHHHHHHSSS-----SCCCHHHHHHHHTTCCEE-TTEECHHHHHHHHHC
T ss_pred             cHHHHHHHHhccccCCC-CeEeHHHHHHHHHHcC-----CcCCHHHHHHHHHHhCCC-cCEEcHHHHHHHhcC
Confidence            34679999999999999 9999999999999999     899999999999999988 999999999976643

>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A

Probab=99.23  E-value=2.7e-11  Score=95.33  Aligned_cols=69  Identities=20%  Similarity=0.270  Sum_probs=58.0

Q ss_pred             HhhhhhHHHHhhhhcCC---CCCCcccHHHHHHHHHHhccCCCCCCC----CHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          300 RRASLTETDAFAFLKAD---NDGDYITYSGFCEALEQLNLTGHKHGL----ADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~---~~~G~i~~~el~~~l~~~g~~~~~~~~----~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .....+|+++|+.||.+   ++ |+|+.+||+.+|+.++  +  ..+    +++++++||+++|.|+||.|+|+||+.+|
T Consensus         7 e~~i~~l~~~F~~fD~~~g~~~-G~Is~~EL~~~l~~~~--~--~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m   81 (100)
T 3nxa_A            7 EKAVIVLVENFYKYVSKYSLVK-NKISKSSFREMLQKEL--N--HMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLI   81 (100)
T ss_dssp             HHHHHHHHHHHHHTSCTTCSCT-TCBCHHHHHHHHHHHS--T--TTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCcCCCCC-CeEcHHHHHHHHHHHc--c--ccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHH
Confidence            45667899999999996   37 9999999999998754  0  223    37899999999999999999999999766


Q ss_pred             h
Q 013259          373 W  373 (447)
Q Consensus       373 ~  373 (447)
                      .
T Consensus        82 ~   82 (100)
T 3nxa_A           82 G   82 (100)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A

Probab=99.21  E-value=4.4e-11  Score=100.69  Aligned_cols=65  Identities=26%  Similarity=0.433  Sum_probs=61.1

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ....++.+|+.||+|++ |+|+.+||+.+|..+|     ..+++++++.+|+.+|.|+||.|+|+||+.+|
T Consensus        77 ~~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~~~~~~~~~~D~d~dG~I~~~eF~~~~  141 (143)
T 2obh_A           77 TKEEILKAFKLFDDDET-GKISFKNLKRVAKELG-----ENLTDEELQEMIDEADRDGDGEVSEQEFLRIM  141 (143)
T ss_dssp             HHHHHHHHHHHHCTTCS-SSBCHHHHHHHHHHTT-----CCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence            45678999999999999 9999999999999999     88999999999999999999999999999765

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}

Probab=99.21  E-value=3.2e-11  Score=93.38  Aligned_cols=67  Identities=31%  Similarity=0.544  Sum_probs=62.0

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ....++.+|+.+|.|++ |+|+.+||+.+|..+|     ..+++++++.++..+|.|++|.|+|+||+..+..
T Consensus         7 ~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~   73 (92)
T 2kn2_A            7 AEEELKEAFKVFDKDQN-GYISASELRHVMINLG-----EKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMT   73 (92)
T ss_dssp             HHHHHHHHHHHHCTTCS-SEECHHHHHHHHHHTT-----CCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCC-CeEcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence            34578999999999999 9999999999999999     8899999999999999999999999999976644

>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A

Probab=99.20  E-value=1.6e-11  Score=97.70  Aligned_cols=70  Identities=17%  Similarity=0.224  Sum_probs=58.3

Q ss_pred             HhhhhhHHHHhhhhc-CCCCCCcccHHHHHHHHHH-hccCCCCCCC-CHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          300 RRASLTETDAFAFLK-ADNDGDYITYSGFCEALEQ-LNLTGHKHGL-ADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D-~~~~~G~i~~~el~~~l~~-~g~~~~~~~~-~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ......++++|+.|| +|+++|+|+.+||+.+|+. +|     ..+ ++++++++|+.+|.|+||.|+|+||+.+|..
T Consensus        18 e~~~~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg-----~~~~~~~ev~~li~~~D~d~dG~Idf~EF~~~~~~   90 (106)
T 2h2k_A           18 EESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLP-----HLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGE   90 (106)
T ss_dssp             HHHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCT-----TTTTTCCCHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcC-----cCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH
Confidence            345678999999999 7985379999999999986 66     444 3478999999999999999999999976643

>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A

Probab=99.20  E-value=2.7e-11  Score=96.37  Aligned_cols=64  Identities=19%  Similarity=0.303  Sum_probs=58.9

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ....++++|+.||+ ++ |+|+.+|++.+|+.+|       ++++++.+++..+|.|+||.|+|+||+.+|..
T Consensus        13 e~~~~~~~F~~~D~-~d-G~Is~~el~~~l~~~g-------l~~~el~~i~~~~D~d~dG~id~~EF~~~m~~   76 (106)
T 1eh2_A           13 DKAKYDAIFDSLSP-VN-GFLSGDKVKPVLLNSK-------LPVDILGRVWELSDIDHDGMLDRDEFAVAMFL   76 (106)
T ss_dssp             HHHHHHHHHTTSCC-SS-SCCBHHHHHHHHHTTT-------CCHHHHHHHHHHHCSSCSSBCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCC-CC-CeEcHHHHHHHHHHcC-------CCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence            45678999999999 99 9999999999999988       88999999999999999999999999977744

>1i9z_A Synaptojanin, phosphatidylinositol phosphate phosphatase; spsynaptojanin, IPP5C, IP3, IP2,, hydrolase; HET: 2IP; 1.80A {Schizosaccharomyces pombe} SCOP: d.151.1.2 PDB: 1i9y_A*

Probab=99.18  E-value=5.7e-11  Score=114.61  Aligned_cols=167  Identities=14%  Similarity=0.095  Sum_probs=87.4

Q ss_pred             CceeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhh---CCCcE--EEEccccc-Ch-----------h
Q 013259           28 PCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLY---ERSSI--ICLQEFWV-GN-----------E   90 (447)
Q Consensus        28 ~~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~---~~~DI--I~LQEv~~-~~-----------~   90 (447)
                      -.+.|+||||.+..           +.           ..|.++|..   ..|||  |||||+.. ..           .
T Consensus        25 ~~i~v~TwNv~g~~-----------~~-----------~~l~~~L~~~~~~~~DI~viglQEiv~l~~~~~~~~~~~~~~   82 (347)
T 1i9z_A           25 VKIFVASYNLNGCS-----------AT-----------TKLENWLFPENTPLADIYVVGFQEIVQLTPQQVISADPAKRR   82 (347)
T ss_dssp             EEEEEEEEECTTCC-----------CC-----------SCCHHHHSCSSSCCCSEEEEEEECSSCCC-----CCCHHHHH
T ss_pred             cEEEEEeEecCCCC-----------Cc-----------hhHHHHhccccCCCCCEEEEEeEEeecCchhhhcccCchhHH
Confidence            36999999998631           00           125566764   68999  99999842 11           1


Q ss_pred             hHHHHHHHHhhh---cCCcEEEecCCCCCCceEEEEEecCCceEeeeEEEEecCCCCchhhhhhhcccccccccccCCCC
Q 013259           91 ELVDMYEKRLSD---AGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLR  167 (447)
Q Consensus        91 ~~~~~l~~~l~~---~gy~~~~~~~~~~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g  167 (447)
                      .+...+...|..   .++.|.......-.+.+++||+|....+-+..........+- .+....    ...+..++...+
T Consensus        83 ~w~~~i~~~L~~~~~~~~~Y~~v~s~~l~g~~L~Vfvr~~~~~~i~~v~~~~v~tG~-~g~~gn----KGav~vr~~~~~  157 (347)
T 1i9z_A           83 EWESCVKRLLNGKCTSGPGYVQLRSGQLVGTALMIFCKESCLPSIKNVEGTVKKTGL-GGVSGN----KGAVAIRFDYED  157 (347)
T ss_dssp             HHHHHHHHHHHHTCCSSCCEEEEEEEEETTEEEEEEEEGGGGGGEEEEEEEEEECCC-C----C----CEEEEEEEEETT
T ss_pred             HHHHHHHHHHhhcccCCCceeEEEEeeccceEEEEEEehHhhhhccceeeeeEeccC-CCccCC----CceEEEEEEECC
Confidence            245556666753   123333222222345688888776643322111111111110 000000    001113334457


Q ss_pred             CeEEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCc
Q 013259          168 QEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGS  223 (447)
Q Consensus       168 ~~l~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~  223 (447)
                      ..|+++|+||.+..  .....|..+...+++.+.-.....-....++|+|||||..
T Consensus       158 ~~l~fvn~HLaa~~--~~~~~R~~d~~~I~~~l~f~~~~~i~~~d~v~~~GDlNyR  211 (347)
T 1i9z_A          158 TGLCFITSHLAAGY--TNYDERDHDYRTIASGLRFRRGRSIFNHDYVVWFGDFNYR  211 (347)
T ss_dssp             EEEEEEEEECCCCS--SCHHHHHHHHHHHHHHCCCGGGCCTTSSSEEEEEEECCCC
T ss_pred             eEEEEEEecCCCCC--ccHHHHHHHHHHHHHhhccCcccccccCccEEEecccccc
Confidence            88999999997743  2334588887777654421000000134689999999943

>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=99.18  E-value=7.3e-12  Score=100.50  Aligned_cols=65  Identities=20%  Similarity=0.241  Sum_probs=58.7

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ....++++|+.||+|++ |+|+.+||+.+|+.+|       ++++++++|+..+|.|+||.|+|+||+.+|..
T Consensus        20 ~~~~~~~~F~~~D~d~d-G~Is~~el~~~l~~~g-------l~~~el~~i~~~~D~d~dG~I~~~EF~~~m~~   84 (110)
T 1iq3_A           20 QREYYVNQFRSLQPDPS-SFISGSVAKNFFTKSK-------LSIPELSYIWELSDADCDGALTLPEFCAAFHL   84 (110)
T ss_dssp             SHHHHHHHHHHHCCSSS-SEEEHHHHHHHCCSSS-------CSSCCHHHHHHHHCSSSCSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCC-CeEcHHHHHHHHHHcC-------CCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence            44578899999999999 9999999999998877       67788999999999999999999999977643

>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}

Probab=99.18  E-value=2.2e-11  Score=106.69  Aligned_cols=66  Identities=21%  Similarity=0.400  Sum_probs=60.9

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ....++.+|+.||+|++ |+|+.+||+.+|..+|     ..+++++++.||+.+| |+||+|+|+||+++|..
T Consensus        82 ~~~~l~~aF~~fD~d~~-G~I~~~el~~~l~~~g-----~~~~~~ei~~l~~~~d-d~dG~I~~~EF~~~m~k  147 (176)
T 2lhi_A           82 SEQELLEAFKVFDKNGD-GLISAAELKHVLTSIG-----EKLTDAEVDDMLREVS-DGSGEINIQQFAALLSK  147 (176)
T ss_dssp             HHHHHHHHHHHHCSSCS-SSBCHHHHHHHHHTTT-----CCCCHHHHHHHHHHHH-TTSSCBCTTHHHHHHTC
T ss_pred             cHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHcC-----cccchHHHHHHHHhhc-CCCCeEeHHHHHHHHHh
Confidence            34578999999999999 9999999999999999     8999999999999999 99999999999976643

>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A

Probab=99.17  E-value=4.8e-11  Score=99.12  Aligned_cols=64  Identities=22%  Similarity=0.275  Sum_probs=58.8

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ....++++|+.|| |++ |+|+.+||+.+|+.+|       ++++++++|+..+|.|+||.|+|+||+.+|..
T Consensus        49 e~~~l~~~F~~fD-d~d-G~Is~~El~~~l~~~g-------l~~~el~~I~~~~D~d~dG~Ld~~EF~~am~l  112 (139)
T 2jq6_A           49 DKPTYDEIFYTLS-PVN-GKITGANAKKEMVKSK-------LPNTVLGKIWKLADVDKDGLLDDEEFALANHL  112 (139)
T ss_dssp             THHHHHHHHHHSC-CSS-SEEEHHHHHHHHHHTT-------CCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhC-CCC-CeECHHHHHHHHHHhC-------cCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            3457899999999 999 9999999999999988       88999999999999999999999999977744

>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}

Probab=99.17  E-value=5.6e-11  Score=95.57  Aligned_cols=64  Identities=19%  Similarity=0.246  Sum_probs=58.1

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ....++++|+.||+|++ |+|+.+||+.+|+  +     ..+++++++++++.+|.|+||.|+|+||+.+|.
T Consensus        12 ~~~~l~~~F~~~D~d~d-G~I~~~El~~~l~--~-----~~~~~~~~~~i~~~~D~d~dG~I~~~EF~~~~~   75 (111)
T 2kgr_A           12 SRLKYRQLFNSHDKTMS-GHLTGPQARTILM--Q-----SSLPQAQLASIWNLSDIDQDGKLTAEEFILAMH   75 (111)
T ss_dssp             HHHHHHHHHHTTSCSSC-CEEEHHHHHHHHH--T-----TCCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCC-CcCcHHHHHHHHH--h-----CCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHH
Confidence            45678999999999999 9999999999998  4     558999999999999999999999999997663

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}

Probab=99.17  E-value=8.1e-12  Score=90.19  Aligned_cols=61  Identities=18%  Similarity=0.280  Sum_probs=56.9

Q ss_pred             HHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          306 ETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       306 l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ++++|+.+|.|++ |+|+.+||+.+|+.+|     ..+++++++.++..+|.|++|.|+|+||+..+
T Consensus         2 l~~~F~~~D~d~~-G~i~~~e~~~~l~~~~-----~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~   62 (66)
T 3li6_A            2 AEALFKEIDVNGD-GAVSYEEVKAFVSKKR-----AIKNEQLLQLIFKSIDADGNGEIDQNEFAKFY   62 (66)
T ss_dssp             CCHHHHHHCTTCS-SSCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHH
T ss_pred             HHHHHHHHCCCCC-CcccHHHHHHHHHHcc-----CCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence            4578999999999 9999999999999998     77899999999999999999999999999665

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...

Probab=99.17  E-value=8.6e-12  Score=105.61  Aligned_cols=119  Identities=17%  Similarity=0.241  Sum_probs=91.2

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhcc------
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT------  375 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~------  375 (447)
                      ....++++|..+|.|++ |.|+.+||+.+|+.+|     ..+++.+++.++..+|.|++|.|+|+||+..+...      
T Consensus         8 ~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~   81 (148)
T 1exr_A            8 QIAEFKEAFALFDKDGD-GTITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDS   81 (148)
T ss_dssp             HHHHHHHHHHHHCTTCS-SEECHHHHHHHHHHHT-----CCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHcC-----CCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhcccCCCc
Confidence            45678999999999999 9999999999999999     88999999999999999999999999999766321      


Q ss_pred             -----CcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          376 -----TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       376 -----~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                           ..+...|.+..|.+...|........|..++...     +..  ....+|.+.+|.|+
T Consensus        82 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~-----~~~--~~~~~d~d~dg~i~  137 (148)
T 1exr_A           82 EEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDE-----VDE--MIREADIDGDGHIN  137 (148)
T ss_dssp             HHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHH-----HHH--HHHHHCSSSSSSBC
T ss_pred             HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHH-----HHH--HHHHhCCCCCCcEe
Confidence                 2345667777787777776555555554333222     222  23457778888765

>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A

Probab=99.17  E-value=3.3e-11  Score=93.47  Aligned_cols=69  Identities=14%  Similarity=0.197  Sum_probs=58.7

Q ss_pred             hhhhhHHHHhhhhc-CCCCCC-cccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          301 RASLTETDAFAFLK-ADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       301 ~~~~~l~~~F~~~D-~~~~~G-~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      .....++++|+.|| +|++ | +|+.+||+.+|+..+  +.+. +++++++.+|+.+|.|+||.|+|+||+..+.
T Consensus         7 ~~~~~l~~~F~~~D~~d~d-G~~I~~~El~~~l~~~~--~~~~-~~~~~i~~~~~~~D~d~dG~I~f~EF~~~~~   77 (92)
T 2kax_A            7 KALTTMVTTFHKYSGREGS-KLTLSRKELKELIKKEL--CLGE-MKESSIDDLMKSLDKNSDQEIDFKEYSVFLT   77 (92)
T ss_dssp             HHHHHHHHHHHHHHTTSSC-SSEEEHHHHHHHHHHHS--CCTT-TCCTTHHHHHHHHTTTCSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhCCC-CCeeCHHHHHHHHHHHc--CCCC-CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            45568999999999 9999 9 999999999998732  0003 7888999999999999999999999997663

>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A

Probab=99.17  E-value=4.8e-11  Score=91.11  Aligned_cols=65  Identities=11%  Similarity=0.042  Sum_probs=60.3

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHH---HHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEE---TKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~---~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ....++++|..||.|++ |+|+.+||+.+|+.+|     ..+++++   ++.++..+|.|++|.|+| ||+..+.
T Consensus        12 ~~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~   79 (86)
T 1j7q_A           12 EKDECMKIFDIFDRNAE-NIAPVSDTMDMLTKLG-----QTYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCS   79 (86)
T ss_dssp             HHHHHHHHHHHHSTTTT-SCBCHHHHHHHHHHTS-----CCCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHHc-----CCCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHH
Confidence            45678999999999999 9999999999999999     8899999   999999999999999999 9997663

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}

Probab=99.17  E-value=5.5e-11  Score=91.99  Aligned_cols=65  Identities=15%  Similarity=0.302  Sum_probs=60.0

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ......++.+|+.+|.|++ |+|+.+||+.+|+.+|       ++.++++.++..+|.|+||.|+|+||+..+
T Consensus        23 ~~~~~~l~~~F~~~D~d~~-G~I~~~El~~~l~~~g-------~~~~~~~~~~~~~D~d~dg~I~~~EF~~~~   87 (91)
T 2pmy_A           23 GEELARLRSVFAACDANRS-GRLEREEFRALCTELR-------VRPADAEAVFQRLDADRDGAITFQEFARGF   87 (91)
T ss_dssp             HHHHHHHHHHHHHHCTTCS-SSEEHHHHHHHHHHTT-------CCHHHHHHHHHHHCTTCSSEECHHHHTHHH
T ss_pred             HHHHHHHHHHHHHHCCCCC-CCCcHHHHHHHHHHcC-------cCHHHHHHHHHHhCCCCCCCEeHHHHHHHH
Confidence            4556789999999999999 9999999999999988       789999999999999999999999999655

>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A

Probab=99.17  E-value=3.8e-12  Score=108.04  Aligned_cols=120  Identities=14%  Similarity=0.142  Sum_probs=96.2

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc------
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK------  374 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~------  374 (447)
                      .+..+++++|..||+|++ |+|+.+||+.+|+.+|     ..++++++..++..+|.+++|.|+|.||+..+..      
T Consensus         7 eqi~el~~~F~~~D~d~~-G~I~~~El~~~l~~~~-----~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~   80 (148)
T 2lmt_A            7 EQIAEFKDAFVQFDKEGT-GKIATRELGTLMRTLG-----QNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETD   80 (148)
T ss_dssp             HHHHHHHHHHHHHHCSSC-CEEEGGGHHHHHHHHT-----CCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTT
T ss_pred             HHHHHHHHHHHHHcCCCC-CeECHHHHHHHHHhcC-----CCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccC
Confidence            356789999999999999 9999999999999999     8899999999999999999999999999976632      


Q ss_pred             -----cCcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          375 -----TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       375 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                           ...+...|.+..|.++..|.......+|..++...     +..  ....+|.+.+|.++
T Consensus        81 ~~~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e-----~~~--l~~~~D~d~dG~I~  137 (148)
T 2lmt_A           81 TEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEE-----IDE--MIREADFDGDGMIN  137 (148)
T ss_dssp             THHHHHHHHHHHHSSCSSEECHHHHHHHHHHHTCCCCHHH-----HHH--HHHHHCCSCCSSEE
T ss_pred             cHHHHHHHHHHHCCCCcCcCcHHHHHHHHHHcCccccHHH-----HHH--HHHHhCCCCCCeEe
Confidence                 12345667788888888887666666775544333     222  34568889999875

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}

Probab=99.16  E-value=2.4e-11  Score=104.71  Aligned_cols=132  Identities=17%  Similarity=0.235  Sum_probs=95.8

Q ss_pred             hhHHHHhHHHHHH-HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeeh
Q 013259          287 WSEAVFGMFKCLL-RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDY  365 (447)
Q Consensus       287 w~~~v~~~~~~~~-~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~  365 (447)
                      ....++..+...+ ......++++|..+|.|++ |+|+.+||+.+|..+|     ..++++++..++..+|.|++|.|+|
T Consensus         9 ~~~~~~~~~~~~l~~~~~~~l~~~F~~~D~~~~-G~i~~~e~~~~l~~~~-----~~~~~~~~~~~~~~~d~~~~g~i~~   82 (166)
T 2aao_A            9 FKKMALRVIAESLSEEEIAGLKEMFNMIDADKS-GQITFEELKAGLKRVG-----ANLKESEILDLMQAADVDNSGTIDY   82 (166)
T ss_dssp             HHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCC-SSBCHHHHHHHGGGGT-----CCCCHHHHHHHHHHHCTTCCSSBCH
T ss_pred             HHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCC-CeEeHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCeEcH
Confidence            3455556666555 5567789999999999999 9999999999999999     8899999999999999999999999


Q ss_pred             HHHHHHHhc----------cCcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          366 KEFQQRIWK----------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       366 ~EF~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                      +||+..+..          ...+...|.+..|.+...|........|+.       +.++..  ....+|.+.+|.|+
T Consensus        83 ~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~-------~~~~~~--~~~~~d~~~dg~i~  151 (166)
T 2aao_A           83 KEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFGVE-------DVRIEE--LMRDVDQDNDGRID  151 (166)
T ss_dssp             HHHHHHHTTCHHHHTTHHHHHHHHHHCTTCSSSBCHHHHHHHTCC---------------CC--HHHHHCTTCSSSBC
T ss_pred             HHHHHHHHHHhhcccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCC-------HHHHHH--HHHHhCCCCCCcEe
Confidence            999976632          222345566777777777665555555532       222222  33467778888875

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...

Probab=99.15  E-value=1.3e-10  Score=98.20  Aligned_cols=67  Identities=25%  Similarity=0.491  Sum_probs=62.2

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      .....++.+|+.+|+|++ |+|+.+||+.+|..+|     ..+++++++.++..+|.|+||.|+|+||+.+|.
T Consensus        80 ~~~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~  146 (148)
T 1exr_A           80 DSEEELIEAFKVFDRDGN-GLISAAELRHVMTNLG-----EKLTDDEVDEMIREADIDGDGHINYEEFVRMMV  146 (148)
T ss_dssp             HHHHHHHHHHHHHSTTCS-SCBCHHHHHHHHHHTT-----CCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred             CcHHHHHHHHHHhCCCCC-CcCCHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence            345678899999999999 9999999999999999     889999999999999999999999999997764

>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}

Probab=99.14  E-value=9.3e-11  Score=93.60  Aligned_cols=67  Identities=13%  Similarity=0.132  Sum_probs=62.2

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      .....++.+|..+|+|++ |+|+.+||+.+|..+|     ..+++++++.++..+|.|++|.|+|+||+..+.
T Consensus        29 ~~~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~~~~~l~~~~D~d~dg~i~~~eF~~~~~   95 (107)
T 2d58_A           29 SKLEGFKEKYMEFDLNGN-GDIDIMSLKRMLEKLG-----VPKTHLELKKLIGEVSSGSGETFSYPDFLRMML   95 (107)
T ss_dssp             HHHHHHHHHHTTSCCCTT-SCEEHHHHHHHHHHTT-----CCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence            455688999999999999 9999999999999999     889999999999999999999999999996653

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}

Probab=99.14  E-value=5.8e-11  Score=99.11  Aligned_cols=67  Identities=19%  Similarity=0.326  Sum_probs=61.7

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCC-CCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKH-GLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~-~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ....++.+|+.||+|++ |+|+.+||+.+|..+|     . .+++++++.+++.+|.|+||.|+|+||+..|..
T Consensus        38 ~~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~~e~~~~~~~~D~d~dG~I~~~EF~~~~~~  105 (135)
T 3h4s_E           38 FVSELCKGFSLLADPER-HLITAESLRRNSGILG-----IEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMVR  105 (135)
T ss_dssp             HHHHHHHHHHHHSBTTT-TBBCHHHHHHHGGGGT-----CCCCCHHHHHHHHHHHCSSCSSSBCHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHCCCCC-CcCCHHHHHHHHHHhC-----CCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence            45678999999999999 9999999999999998     6 799999999999999999999999999976643

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A

Probab=99.14  E-value=1e-10  Score=89.21  Aligned_cols=68  Identities=21%  Similarity=0.396  Sum_probs=60.8

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ......++.+|+.+|.|++ |+|+.+||+.+|..+|      .+++++++.++..+|.|++|.|+|+||+..+..
T Consensus         7 ~~~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~g------~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~   74 (86)
T 2opo_A            7 PQDIADRERIFKRFDTNGD-GKISSSELGDALKTLG------SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARA   74 (86)
T ss_dssp             HHHHHHHHHHHHHHCTTCS-SEEEHHHHHHHHHTTT------TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             HhhHHHHHHHHHHHCCCCC-CCcCHHHHHHHHHHcC------CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            3456788999999999999 9999999999999876      378999999999999999999999999976643

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4

Probab=99.13  E-value=8.5e-11  Score=93.97  Aligned_cols=66  Identities=24%  Similarity=0.417  Sum_probs=61.4

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh---ccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQL---NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~---g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .....++.+|+.+|+|++ |+|+.+||+.+|..+   |     ..+++++++.+++.+|.|+||.|+|+||+..|
T Consensus        38 ~~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~~~~g-----~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~  106 (109)
T 5pal_A           38 KTDAQVKEVFEILDKDQS-GFIEEEELKGVLKGFSAHG-----RDLNDTETKALLAAGDSDHDGKIGADEFAKMV  106 (109)
T ss_dssp             CCHHHHHHHHHHHCTTCS-SEECHHHHHTHHHHHCTTC-----CCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHH
T ss_pred             CcHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHHHHcC-----CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            345678999999999999 999999999999998   7     88999999999999999999999999999765

>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A

Probab=99.13  E-value=6.7e-11  Score=91.71  Aligned_cols=68  Identities=19%  Similarity=0.285  Sum_probs=61.9

Q ss_pred             HhhhhhHHHHhhhhc-CCCCCC-cccHHHHHHHHHH-----hccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          300 RRASLTETDAFAFLK-ADNDGD-YITYSGFCEALEQ-----LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D-~~~~~G-~i~~~el~~~l~~-----~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ......++.+|+.|| +|++ | +|+.+||+.+|+.     +|     ..+++++++.++..+|.|+||.|+|+||+..+
T Consensus         5 ~~~~~~l~~~F~~~D~~d~~-G~~I~~~el~~~l~~~~~~~~g-----~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~   78 (93)
T 1k2h_A            5 ETAMETLINVFHAHSGKEGD-KYKLSKKELKDLLQTELSSFLD-----VQKDADAVDKIMKELDENGDGEVDFQEFVVLV   78 (93)
T ss_dssp             HHHHHHHHHHHHHHHTTSSC-CSSCCHHHHHHHHHHHTHHHHH-----CCCCHHHHHHHHHHHHHCTTSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcccCCC-cCccCHHHHHHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            345668899999999 7999 9 9999999999998     89     88999999999999999999999999999665


Q ss_pred             h
Q 013259          373 W  373 (447)
Q Consensus       373 ~  373 (447)
                      .
T Consensus        79 ~   79 (93)
T 1k2h_A           79 A   79 (93)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}

Probab=99.13  E-value=6.2e-12  Score=112.23  Aligned_cols=133  Identities=8%  Similarity=0.062  Sum_probs=87.8

Q ss_pred             hHHHHhHHHHHH-HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehH
Q 013259          288 SEAVFGMFKCLL-RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYK  366 (447)
Q Consensus       288 ~~~v~~~~~~~~-~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~  366 (447)
                      +..++..+...+ ......++++|..+|.|++ |.|+.+||+.+|..+|     ..+++++++.++..+|.|++|.|+|+
T Consensus        40 k~~~l~~i~~~l~~~e~~~l~~~F~~~D~d~~-G~Is~~El~~~l~~~g-----~~~~~~~~~~l~~~~D~d~~g~I~~~  113 (197)
T 3pm8_A           40 KKIALTIIAKHLCDVEINNLRNIFIALDVDNS-GTLSSQEILDGLKKIG-----YQKIPPDIHQVLRDIDSNASGQIHYT  113 (197)
T ss_dssp             HHHHHHHHHHHCCHHHHHHHHHHHHHHCTTCS-SEECHHHHHHHHHHHC---------CHHHHHHHHC-------CEEHH
T ss_pred             HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC-CcCCHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCeEcHH
Confidence            455566666566 5677899999999999999 9999999999999999     77899999999999999999999999


Q ss_pred             HHHHHHhc----------cCcccccccCCCccccccccccccccc--ceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          367 EFQQRIWK----------TTWSDQRNDLNDEDEDGFVKSSLEQTI--GFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       367 EF~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                      ||+..+..          ...+...|.+..|.+..+|........  |..++..     ++..  ....+|.+.+|.|+
T Consensus       114 EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~~-----~~~~--l~~~~D~d~dG~Is  185 (197)
T 3pm8_A          114 DFLAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDK-----AIDS--LLQEVDLNGDGEID  185 (197)
T ss_dssp             HHHHTTCCHHHHCSHHHHHHHHHHHCTTCSSEECHHHHHHHHC----CCHHHHH-----HHHH--HHHHHCTTCSSSEE
T ss_pred             HHHHHHHHHHhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCCHH-----HHHH--HHHHHcCCCCCcCc
Confidence            99965532          233455677777777777765444444  3222221     1222  33467888888876

>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*

Probab=99.12  E-value=1e-10  Score=94.42  Aligned_cols=67  Identities=13%  Similarity=0.156  Sum_probs=59.1

Q ss_pred             hhhhhHHHHhhhhcC-CCCCC-cccHHHHHHHHH-HhccCCCCCC-----CCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          301 RASLTETDAFAFLKA-DNDGD-YITYSGFCEALE-QLNLTGHKHG-----LADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~-~~~~G-~i~~~el~~~l~-~~g~~~~~~~-----~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .....++++|+.||. |++ | +|+.+||+.+|+ .+|     ..     +++++++.+|+.+|.|+||.|+|+||+.+|
T Consensus         9 ~~~~~l~~~F~~fD~~dgd-G~~Is~~El~~~l~~~lg-----~~~~~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~   82 (113)
T 1xk4_C            9 RNIETIINTFHQYSVKLGH-PDTLNQGEFKELVRKDLQ-----NFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLM   82 (113)
T ss_dssp             HHHHHHHHHHHHHHTTSSS-TTSBCHHHHHHHHHHHTT-----TTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcCCC-CCEECHHHHHHHHHHHhh-----hhhcccccCHHHHHHHHHHhCCCCCCCEeHHHHHHHH
Confidence            345688999999995 999 9 999999999999 777     42     588999999999999999999999999766


Q ss_pred             h
Q 013259          373 W  373 (447)
Q Consensus       373 ~  373 (447)
                      .
T Consensus        83 ~   83 (113)
T 1xk4_C           83 A   83 (113)
T ss_dssp             H
T ss_pred             H
Confidence            3

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=99.12  E-value=2.5e-11  Score=92.82  Aligned_cols=65  Identities=31%  Similarity=0.480  Sum_probs=60.0

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ....++++|+.+|+|++ |+|+.+||+.+|+.+|     ..+++++++.++..+|.|++|.|+|+||+..+
T Consensus        21 ~~~~~~~~F~~~D~d~~-G~i~~~el~~~l~~~~-----~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~   85 (87)
T 1s6j_A           21 EIGGLKELFKMIDTDNS-GTITFDELKDGLKRVG-----SELMESEIKDLMDAADIDKSGTIDYGEFIAAT   85 (87)
T ss_dssp             STTTTTTHHHHHCTTCS-SCEEHHHHHHHHHTTT-----SSCCHHHHHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred             HHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            44568899999999999 9999999999999999     88999999999999999999999999998543

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A

Probab=99.12  E-value=1.6e-11  Score=108.97  Aligned_cols=135  Identities=16%  Similarity=0.133  Sum_probs=94.9

Q ss_pred             hHHHHhHHHHHH-HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehH
Q 013259          288 SEAVFGMFKCLL-RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYK  366 (447)
Q Consensus       288 ~~~v~~~~~~~~-~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~  366 (447)
                      ...++..+...+ ......++++|..+|.|++ |+|+.+||+.+|+.+|     ..++ ++++.++..+|.|++|.|+|+
T Consensus        35 ~~~~l~~~~~~l~~~~~~~l~~~F~~~D~d~~-G~i~~~El~~~l~~~g-----~~~~-~~~~~l~~~~D~d~~g~i~~~  107 (191)
T 3k21_A           35 QKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGK-GYITKEQLKKGLEKDG-----LKLP-YNFDLLLDQIDSDGSGKIDYT  107 (191)
T ss_dssp             HHHHHHHHHHHCCCHHHHHHHHHHHHHCTTCS-SEECHHHHHHHHHHTT-----CCCC-TTHHHHHHHHCTTCSSSEEHH
T ss_pred             HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC-CCCcHHHHHHHHHHcC-----CCcH-HHHHHHHHHhCCCCCCeEeHH
Confidence            345555555555 5677899999999999999 9999999999999999     6677 889999999999999999999


Q ss_pred             HHHHHHhcc---------CcccccccCCCcccccccccccccc--cceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          367 EFQQRIWKT---------TWSDQRNDLNDEDEDGFVKSSLEQT--IGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       367 EF~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                      ||+..+...         ..+...|.+..|.+..+|.......  .|..++....  .++..  ....+|.+.+|.|+
T Consensus       108 EF~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~l~~~~~--~~~~~--~~~~~D~d~dG~Is  181 (191)
T 3k21_A          108 EFIAAALDRKQLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDV--NRVKR--MIRDVDKNNDGKID  181 (191)
T ss_dssp             HHHHHHSCGGGCCHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHSSSCSCCCHHHH--HHHHH--HHHHHCSSSSSSBC
T ss_pred             HHHHHHHhhhhccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcCCCCCCCHhHH--HHHHH--HHHHhcCCCCCeEC
Confidence            999776432         2234556667777776665443332  2222221100  01112  33467888899875

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A

Probab=99.12  E-value=2.9e-11  Score=103.47  Aligned_cols=120  Identities=16%  Similarity=0.248  Sum_probs=94.4

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc------
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK------  374 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~------  374 (447)
                      .....++++|..+|.|++ |+|+.+||..+|..+|     ..++.++++.++..+|.+++|.|+|+||+..+..      
T Consensus        20 ~~~~~l~~~F~~~D~~~~-G~i~~~e~~~~l~~~~-----~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~   93 (161)
T 3fwb_A           20 EQKQEIYEAFSLFDMNND-GFLDYHELKVAMKALG-----FELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRD   93 (161)
T ss_dssp             HHHHHHHHHHHHHCTTSS-SEECHHHHHHHHHHTT-----CCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHcC-----CCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcCC
Confidence            345688999999999999 9999999999999999     8899999999999999999999999999977643      


Q ss_pred             -----cCcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          375 -----TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       375 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                           ...+...|.+..|.+...|.......+|..++...     +..  ....+|.+.+|.|+
T Consensus        94 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~-----~~~--~~~~~d~~~~g~i~  150 (161)
T 3fwb_A           94 PLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEE-----LRA--MIEEFDLDGDGEIN  150 (161)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHH-----HHH--HHHTTCSSSSSSEE
T ss_pred             cHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhCCCCCHHH-----HHH--HHHHhCCCCCCcCc
Confidence                 22345667777888888777666666665433322     222  34567888888875

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=99.11  E-value=3e-11  Score=106.90  Aligned_cols=118  Identities=18%  Similarity=0.206  Sum_probs=87.2

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhcc-----
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT-----  375 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~-----  375 (447)
                      .....++++|..+|.|++ |.|+.+||+.+|..+|     ..++++++..++..+|.|++|.|+|+||+..+...     
T Consensus         7 ~~~~~l~~~F~~~D~d~d-G~I~~~E~~~~l~~~g-----~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~   80 (188)
T 1s6i_A            7 EEIGGLKELFKMIDTDNS-GTITFDELKDGLKRVG-----SELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLER   80 (188)
T ss_dssp             TTTCSHHHHHHTTSSSSS-SCEEHHHHHHHHTTTT-----CCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCC
T ss_pred             HHHHHHHHHHHHHCCCCC-CcCCHHHHHHHHHHcC-----CCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCH
Confidence            345689999999999999 9999999999999999     88999999999999999999999999999766321     


Q ss_pred             -----CcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          376 -----TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       376 -----~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                           ..+...|.+..|.+...|.......+|+       .+.++..  ....+|.+.+|.|+
T Consensus        81 ~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~g~-------~~~~~~~--~~~~~D~d~dG~Is  134 (188)
T 1s6i_A           81 EENLVSAFSYFDKDGSGYITLDEIQQACKDFGL-------DDIHIDD--MIKEIDQDNDGQID  134 (188)
T ss_dssp             CCSTHHHHHHTTTTCSSEEEHHHHHHTTTTTTC-------CTTHHHH--HHHHHCSSSSSEEE
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCC-------CHHHHHH--HHHHHCCCCCCcEe
Confidence                 1234456666666666665544444441       1122222  33456777777665

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4

Probab=99.11  E-value=1.2e-10  Score=93.04  Aligned_cols=66  Identities=23%  Similarity=0.375  Sum_probs=61.2

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh---ccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQL---NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~---g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .....++.+|+.||+|++ |+|+.+||+.+|..+   |     ..+++++++.+++.+|.|+||.|+|+||+..+
T Consensus        39 ~~~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~~~~~g-----~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~  107 (109)
T 1bu3_A           39 KSADDIKKAFFVIDQDKS-GFIEEDELKLFLQVFSAGA-----RALTDAETKAFLKAGDSDGDGAIGVDEWAALV  107 (109)
T ss_dssp             SCHHHHHHHHHHHCTTCS-SSEEHHHHHTHHHHHSTTC-----CCCCHHHHHHHHHHHCTTCSSEECHHHHHHHH
T ss_pred             hhHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHHcccC-----CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence            355688999999999999 999999999999998   7     78999999999999999999999999999654

>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10

Probab=99.11  E-value=1.4e-10  Score=86.61  Aligned_cols=64  Identities=23%  Similarity=0.401  Sum_probs=58.4

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ..++.+|+.+|.|++ |+|+.+||+.+|+.+| .     +++++++.++..+|.|++|.|+|+||+..+..
T Consensus         3 ~~l~~~F~~~D~~~~-G~i~~~el~~~l~~~g-~-----~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~   66 (78)
T 1k9u_A            3 DDMERIFKRFDTNGD-GKISLSELTDALRTLG-S-----TSADEVQRMMAEIDTDGDGFIDFNEFISFCNA   66 (78)
T ss_dssp             CHHHHHHHHHCTTCS-SEECHHHHHHHHHHHH-T-----CCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCC-CcCcHHHHHHHHHHhC-C-----CCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence            468899999999999 9999999999999886 2     78999999999999999999999999976643

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A

Probab=99.11  E-value=2.4e-11  Score=105.01  Aligned_cols=120  Identities=17%  Similarity=0.195  Sum_probs=93.7

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc------
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK------  374 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~------  374 (447)
                      .....++++|..+|.|++ |+|+.+||+.+|..+|     ..++.++++.++..+|.|++|.|+|+||+..+..      
T Consensus        25 ~~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~~-----~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~   98 (169)
T 3qrx_A           25 EQKQEIREAFDLFDTDGS-GTIDAKELKVAMRALG-----FEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERD   98 (169)
T ss_dssp             HHHHHHHHHHHHHCTTCC-SEECHHHHHHHHHHTS-----CCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHcC-----CCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccC
Confidence            355788999999999999 9999999999999999     8899999999999999999999999999976632      


Q ss_pred             -----cCcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          375 -----TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       375 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                           ...+...|.+..|.+...|........|..++...     +..  ....+|.+.+|.|+
T Consensus        99 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~-----~~~--~~~~~D~~~dg~i~  155 (169)
T 3qrx_A           99 SREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEE-----LQE--MIAEADRNDDNEID  155 (169)
T ss_dssp             HHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHH-----HHH--HHHHHCCSSSSCBC
T ss_pred             cHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHH-----HHH--HHHHhCCCCCCCEe
Confidence                 22345667777888887776665556664333322     222  34567788888875

>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A

Probab=99.11  E-value=2.6e-11  Score=95.62  Aligned_cols=67  Identities=18%  Similarity=0.272  Sum_probs=58.5

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHH-----hccCCCCC--CCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQ-----LNLTGHKH--GLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~-----~g~~~~~~--~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ......++++|+.||.+ + |+|+.+||+.+|+.     +|     .  .+++++++.+|+.+|.|+||.|+|+||+.+|
T Consensus         6 ~~~~~~l~~~F~~fD~~-~-g~Is~~El~~~l~~~~~~~lg-----~~~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~   78 (100)
T 1psr_A            6 ERSIIGMIDMFHKYTRR-D-DKIDKPSLLTMMKENFPNFLS-----ACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLL   78 (100)
T ss_dssp             HHHHHHHHHHHHHTCCT-T-SCBCHHHHHHHHHHHCHHHHH-----HHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCC-C-CeECHHHHHHHHHHHhHhhhc-----cccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            34567899999999976 8 99999999999987     55     4  5788899999999999999999999999766


Q ss_pred             h
Q 013259          373 W  373 (447)
Q Consensus       373 ~  373 (447)
                      .
T Consensus        79 ~   79 (100)
T 1psr_A           79 G   79 (100)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}

Probab=99.10  E-value=1.1e-10  Score=113.42  Aligned_cols=68  Identities=31%  Similarity=0.533  Sum_probs=61.8

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      .....++++|+.||+|++ |+|+.+||+.+|..+|     ..+++++++.+|+.+|.|+||.|+|+||+++|..
T Consensus       372 d~eeeLreAFk~fDkDgd-G~IS~eELr~vL~~lG-----e~LSdeEIdeLfke~D~DgDGkIsyeEFvkmMtS  439 (440)
T 3u0k_A          372 DSEEEIREAFRVFDKDGN-GYISAAELRHVMTNLG-----EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA  439 (440)
T ss_dssp             --CHHHHHHHHHHCTTCS-SEECHHHHHHHHHHHT-----CCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHC-
T ss_pred             ChHHHHHHHHHHHCCCCc-CcCCHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHhCC
Confidence            345678999999999999 9999999999999999     8899999999999999999999999999987643

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A

Probab=99.10  E-value=1.1e-11  Score=104.60  Aligned_cols=118  Identities=8%  Similarity=0.079  Sum_probs=86.5

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHc-CCCCCceeehHHHHHHHhcc------
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQA-DIDGNGVVDYKEFQQRIWKT------  375 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~-D~~~~g~i~~~EF~~~~~~~------  375 (447)
                      ...++++|..+|.|++ |+|+.+||+.+|+.+|     ..+++++++.++..+ |.+++|.|+|+||+..+...      
T Consensus         3 ~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~   76 (148)
T 1m45_A            3 TRANKDIFTLFDKKGQ-GAIAKDSLGDYLRAIG-----YNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDA   76 (148)
T ss_dssp             CCCCTTCHHHHCTTCC-SEEEGGGHHHHHHHTT-----CCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHG
T ss_pred             HHHHHHHHHHHCCCCC-CCCCHHHHHHHHHHhC-----CCCCHHHHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhccc
Confidence            4567889999999999 9999999999999999     889999999999999 99999999999999766433      


Q ss_pred             ----------CcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          376 ----------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       376 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                                ..+...|.+..|.+...|.......+|..++...     +..  ....+|.+.+|.|+
T Consensus        77 ~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~-----~~~--~~~~~d~d~dg~i~  137 (148)
T 1m45_A           77 TTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAE-----VDE--LLKGVEVDSNGEID  137 (148)
T ss_dssp             GGCCCTHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHH-----HHH--HHTTCCCCTTSEEE
T ss_pred             cccccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHH-----HHH--HHHHhCCCCCCeEe
Confidence                      1123456666677776666555555554333222     222  34577888899875

>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A

Probab=99.10  E-value=5.6e-11  Score=92.94  Aligned_cols=67  Identities=18%  Similarity=0.189  Sum_probs=58.9

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHH-----hccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQ-----LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~-----~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ......++++|+.||. ++ |+|+.+||+.+|+.     +|     ..+++++++.+|+.+|.|+||.|+|+||+.+|.
T Consensus         5 ~~~~~~l~~~F~~fD~-~d-g~Is~~El~~~l~~~~~~~lg-----~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~   76 (96)
T 1a4p_A            5 EHAMETMMFTFHKFAG-DK-GYLTKEDLRVLMEKEFPGFLE-----NQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIA   76 (96)
T ss_dssp             HHHHHHHHHHHHHHHG-GG-CSBCHHHHHHHHHHHCHHHHH-----HSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcC-CC-CeECHHHHHHHHHHHcccccc-----cccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            3456789999999994 78 99999999999986     56     668899999999999999999999999997663

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A

Probab=99.10  E-value=1.5e-10  Score=92.43  Aligned_cols=66  Identities=24%  Similarity=0.424  Sum_probs=61.2

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh---ccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQL---NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~---g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .....++.+|+.+|+|++ |+|+.+||+.+|..+   |     ..+++++++.+++.+|.|++|.|+|+||+..+
T Consensus        38 ~~~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~~~~~g-----~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~  106 (109)
T 1rwy_A           38 KSADDVKKVFHILDKDKS-GFIEEDELGSILKGFSSDA-----RDLSAKETKTLMAAGDKDGDGKIGVEEFSTLV  106 (109)
T ss_dssp             SCHHHHHHHHHHHSTTCS-SEECHHHHHTHHHHHCTTC-----CCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHH
T ss_pred             chHHHHHHHHHHHCCCCC-CeEcHHHHHHHHHHHhccC-----CCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHH
Confidence            455688999999999999 999999999999998   6     78999999999999999999999999999765

>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}

Probab=99.10  E-value=5.2e-11  Score=104.21  Aligned_cols=119  Identities=19%  Similarity=0.253  Sum_probs=91.8

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhcc-----
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT-----  375 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~-----  375 (447)
                      .+..+++++|..||+|++ |+|+.+||+.+|+.+|     ..+++.++..++..+|.+++|.|+|+||+..+...     
T Consensus         8 eqi~elk~~F~~~D~d~d-G~I~~~El~~~l~~lg-----~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~~   81 (176)
T 2lhi_A            8 EQIAEFKEAFALFDKDNN-GSISSSELATVMRSLG-----LSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSND   81 (176)
T ss_dssp             TGGGHHHHHHHTTCSSCS-SCBCHHHHHHHHHHHT-----CCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSSH
T ss_pred             HHHHHHHHHHHHHCCCCC-CCCCHHHHHHHHHHcC-----CChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcccCC
Confidence            466789999999999999 9999999999999999     88999999999999999999999999999766332     


Q ss_pred             ------CcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          376 ------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       376 ------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                            ..+...|.+..|.++..|.......+|..++...     +..  ....+| +.||.++
T Consensus        82 ~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~~~~~e-----i~~--l~~~~d-d~dG~I~  137 (176)
T 2lhi_A           82 SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAE-----VDD--MLREVS-DGSGEIN  137 (176)
T ss_dssp             HHHHHHHHHHHHCSSCSSSBCHHHHHHHHHTTTCCCCHHH-----HHH--HHHHHH-TTSSCBC
T ss_pred             cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCcccchHH-----HHH--HHHhhc-CCCCeEe
Confidence                  2234567788888888877666666665544332     111  122345 6677654

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A

Probab=99.09  E-value=8.6e-11  Score=93.95  Aligned_cols=66  Identities=24%  Similarity=0.394  Sum_probs=61.2

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh---ccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQL---NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~---g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .....++.+|+.||+|++ |+|+.+||+.+|..+   |     ..+++++++.+++.+|.|+||.|+|+||+..+
T Consensus        39 ~~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~~~~~-----~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~  107 (109)
T 3fs7_A           39 KTPDQIKKVFGILDQDKS-GFIEEEELQLFLKNFSSSA-----RVLTSAETKAFLAAGDTDGDGKIGVEEFQSLV  107 (109)
T ss_dssp             CCHHHHHHHHHHHSTTCS-SSBCHHHHHTTGGGTCTTS-----CCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred             CcHHHHHHHHHHHCCCCC-CeEeHHHHHHHHHHHhccc-----ccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            455678999999999999 999999999999998   7     88999999999999999999999999999665

>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A

Probab=99.09  E-value=1e-10  Score=90.02  Aligned_cols=67  Identities=16%  Similarity=0.209  Sum_probs=60.8

Q ss_pred             hhhhhHHHHhhhhc-CCCCCC-cccHHHHHHHHHH---hccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          301 RASLTETDAFAFLK-ADNDGD-YITYSGFCEALEQ---LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       301 ~~~~~l~~~F~~~D-~~~~~G-~i~~~el~~~l~~---~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      .....++.+|+.+| +|++ | +|+.+||+.+|+.   +|     ..+++++++.+++.+|.|+||.|+|+||+..+.
T Consensus         7 ~~~~~l~~~F~~~D~~d~~-G~~i~~~el~~~l~~~~~~g-----~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~   78 (90)
T 1k8u_A            7 QAIGLLVAIFHKYSGREGD-KHTLSKKELKELIQKELTIG-----SKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLG   78 (90)
T ss_dssp             HHHHHHHHHHHHHHTSSSC-TTEEEHHHHHHHHHHHSCCG-----GGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCC-CCcCCHHHHHHHHHHhcccC-----CCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHH
Confidence            44568899999999 6999 9 9999999999997   88     778999999999999999999999999997653

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A

Probab=99.08  E-value=1.1e-10  Score=93.17  Aligned_cols=66  Identities=26%  Similarity=0.419  Sum_probs=61.1

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh---ccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQL---NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~---g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .....++.+|+.||+|++ |+|+.+||+.+|..+   |     ..+++++++.++..+|.|++|.|+|+||+..+
T Consensus        38 ~~~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~~~~~g-----~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~  106 (108)
T 2pvb_A           38 KSLDDVKKAFYVIDQDKS-GFIEEDELKLFLQNFSPSA-----RALTDAETKAFLADGDKDGDGMIGVDEFAAMI  106 (108)
T ss_dssp             SCHHHHHHHHHHHCTTCS-SSBCHHHHHTGGGGTCTTS-----CCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHCCCCC-CcCCHHHHHHHHHHHhccC-----CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence            345688999999999999 999999999999998   7     78999999999999999999999999999655

>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A

Probab=99.08  E-value=3.9e-11  Score=93.25  Aligned_cols=66  Identities=14%  Similarity=0.205  Sum_probs=58.7

Q ss_pred             hhhhhHHHHhhhhcC-CCCCC-cccHHHHHHHH-HHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          301 RASLTETDAFAFLKA-DNDGD-YITYSGFCEAL-EQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~-~~~~G-~i~~~el~~~l-~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .....++.+|+.||. |++ | +|+.+||+.+| +.+|     ..++..+++.+++.+|.|+||.|+|+||+..+
T Consensus         7 ~~~~~l~~~F~~~D~~d~d-G~~I~~~El~~~l~~~~g-----~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~   75 (93)
T 1xk4_A            7 KALNSIIDVYHKYSLIKGN-FHAVYRDDLKKLLETESP-----QYIRKKGADVWFKELDINTDGAVNFQEFLILV   75 (93)
T ss_dssp             HHHHHHHHHHHHHHTSSSC-TTCBCHHHHHHHHHHHSC-----HHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcCCC-cCeECHHHHHHHHHHHCc-----ccCCHHHHHHHHHHhCCCCCCCCcHHHHHHHH
Confidence            345678999999999 999 9 99999999999 7787     55666789999999999999999999999665

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...

Probab=99.07  E-value=5.6e-11  Score=101.70  Aligned_cols=120  Identities=18%  Similarity=0.201  Sum_probs=90.7

Q ss_pred             hhhhhHHHHhhhhcCCC-CCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhcc----
Q 013259          301 RASLTETDAFAFLKADN-DGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT----  375 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~-~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~----  375 (447)
                      .....++++|..+|.|+ + |.|+.+||+.+|..+|     ..+++++++.++..+|.|++|.|+|+||+..+...    
T Consensus        15 ~~~~~l~~~F~~~D~~~~~-G~i~~~e~~~~l~~~~-----~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~~   88 (161)
T 1dtl_A           15 EQKNEFKAAFDIFVLGAED-GSISTKELGKVMRMLG-----QNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDD   88 (161)
T ss_dssp             HHHHHHHHHHHHHTTTCGG-GSBCHHHHHHHHHHTT-----CCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHHHcCCCCC-CcCcHHHHHHHHHHcC-----CCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhccc
Confidence            34567899999999999 9 9999999999999999     88999999999999999999999999999766432    


Q ss_pred             ----------CcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          376 ----------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       376 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                                ..+...|.+..|.++..|........|..++...     +..  ....+|.+.+|.|+
T Consensus        89 ~~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~~~-----~~~--~~~~~D~d~dg~i~  149 (161)
T 1dtl_A           89 SKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDD-----IEE--LMKDGDKNNDGRID  149 (161)
T ss_dssp             ---CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHH-----HHH--HHHHHCTTSSSEEE
T ss_pred             ccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHH-----HHH--HHHHhCCCCCCcEe
Confidence                      1234557777777777776665655554333222     111  23456778888765

>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1

Probab=99.06  E-value=6.8e-11  Score=88.28  Aligned_cols=65  Identities=20%  Similarity=0.341  Sum_probs=58.6

Q ss_pred             hhhhHHHHhhhhcC-CCCCC-cccHHHHHHHHHH-hccCCCCCCC-CHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          302 ASLTETDAFAFLKA-DNDGD-YITYSGFCEALEQ-LNLTGHKHGL-ADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       302 ~~~~l~~~F~~~D~-~~~~G-~i~~~el~~~l~~-~g~~~~~~~~-~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ....++.+|+.+|. |++ | +|+.+||+.+|+. +|     ..+ ++++++.++..+|.|++|.|+|+||+..+
T Consensus         5 ~~~~l~~~F~~~D~~d~~-G~~i~~~el~~~l~~~~g-----~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~   73 (78)
T 1cb1_A            5 SPAELKSIFEKYAAKEGD-PNQLSKEELKQLIQAEFP-----SLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLV   73 (78)
T ss_dssp             CHHHHHHHHHHHHTTSSS-TTEECHHHHHHHHHHHCS-----SCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccCCC-cCEeCHHHHHHHHHHHhh-----hhcccHHHHHHHHHHhcCCCCCCCcHHHHHHHH
Confidence            45678999999999 999 9 9999999999986 88     656 88889999999999999999999999655

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A

Probab=99.06  E-value=3.6e-11  Score=104.99  Aligned_cols=120  Identities=16%  Similarity=0.240  Sum_probs=90.9

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc------
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK------  374 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~------  374 (447)
                      .....++++|..+|.|++ |.|+.+||+.+|..+|     ..++.++++.++..+|.|++|.|+|+||+..+..      
T Consensus         8 ~~~~~l~~~F~~~D~d~~-G~i~~~e~~~~l~~~~-----~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~   81 (179)
T 2f2o_A            8 EQIAEFKEAFSLFDKDGD-GTITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTD   81 (179)
T ss_dssp             SHHHHHHHHHHHHCTTCS-SCBCHHHHHHHHHHTT-----CCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHcC-----CCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccCcc
Confidence            455678999999999999 9999999999999999     8899999999999999999999999999976632      


Q ss_pred             -----cCcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          375 -----TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       375 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                           ...+...|.+..|.+...|........|..++...     +..  ....+|.+.+|.|+
T Consensus        82 ~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g~~~~~~~-----~~~--~~~~~D~~~dg~i~  138 (179)
T 2f2o_A           82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE-----VDE--MIREADIDGDGQVN  138 (179)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC--CCCHHH-----HHH--HHHHHCTTCSSSEE
T ss_pred             cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHH-----HHH--HHHHcCCCCCCcCc
Confidence                 22345667777787877776655555554333222     121  23456778888765

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B

Probab=99.06  E-value=4.4e-10  Score=96.77  Aligned_cols=67  Identities=28%  Similarity=0.278  Sum_probs=62.2

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ....++.+|+.+|.|++ |+|+.+||+.+|..+|     ..+++++++.+|..+|.|+||.|+|+||+..|..
T Consensus        93 ~~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~~~~~~~~~~D~d~dg~I~~~eF~~~~~~  159 (166)
T 2mys_B           93 PEDVIMGAFKVLDPDGK-GSIKKSFLEELLTTGG-----GRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITH  159 (166)
T ss_pred             cHHHHHHHHHHhCCCCC-cceeHHHHHHHHHHcC-----CCCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHHh
Confidence            45678999999999999 9999999999999999     8899999999999999999999999999976644

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A

Probab=99.06  E-value=1.5e-10  Score=92.64  Aligned_cols=66  Identities=26%  Similarity=0.396  Sum_probs=61.0

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh---ccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQL---NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~---g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .....++.+|+.+|+|++ |+|+.+||+.+|..+   |     ..+++++++.+++.+|.|++|.|+|+||+..+
T Consensus        39 ~~~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~~~~~g-----~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~  107 (110)
T 1pva_A           39 MSANDVKKVFKAIDADAS-GFIEEEELKFVLKSFAADG-----RDLTDAETKAFLKAADKDGDGKIGIDEFETLV  107 (110)
T ss_dssp             SCHHHHHHHHHHHCTTCS-SSBCHHHHHTGGGGTCTTC-----CCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred             chHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHHhhcC-----CCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHH
Confidence            345678999999999999 999999999999998   6     77999999999999999999999999999765

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}

Probab=99.06  E-value=3.1e-11  Score=108.39  Aligned_cols=119  Identities=9%  Similarity=0.097  Sum_probs=89.2

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCC--CCCHHHHHHHH-------HHcCCCCCceeehHHHHH
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKH--GLADEETKDLW-------VQADIDGNGVVDYKEFQQ  370 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~--~~~~~~~~~~~-------~~~D~~~~g~i~~~EF~~  370 (447)
                      ......++++|..+|.|++ |+|+.+||+.+|..+|     .  .+++++++.++       ..+|.|++|.|+|+||+.
T Consensus        32 ~~~~~~l~~~F~~~D~d~~-G~i~~~El~~~l~~~~-----~~~~~~~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~  105 (208)
T 2hpk_A           32 PKMLSRLYKRFDTFDLDSD-GKMEMDEVLYWPDRMR-----QLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVE  105 (208)
T ss_dssp             ----CHHHHHHHHHCTTCS-SEECHHHHTHHHHHHH-----HHSCCCHHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHH
T ss_pred             HHHHHHHHHHHHHhCCCCC-CCCCHHHHHHHHHHHH-----hhcCCCHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHH
Confidence            3456789999999999999 9999999999999998     6  79999999999       999999999999999997


Q ss_pred             HHh---------c------------cCcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCC
Q 013259          371 RIW---------K------------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDH  429 (447)
Q Consensus       371 ~~~---------~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  429 (447)
                      .+.         .            ...+...|.+..|.++..|.......+|       +.+.++..  ....+|.+.+
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g-------~~~~~~~~--~~~~~D~d~d  176 (208)
T 2hpk_A          106 ANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFD-------VPQEAAYT--FFEKADTDKS  176 (208)
T ss_dssp             HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT-------SCTTHHHH--HHHHHCTTCC
T ss_pred             HHHHHhhhhhhhhccCChHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC-------cCHHHHHH--HHHHhCCCCC
Confidence            654         1            1133455677777777777665555555       22223332  3446788888


Q ss_pred             ccee
Q 013259          430 ARLT  433 (447)
Q Consensus       430 ~~l~  433 (447)
                      |.|+
T Consensus       177 G~I~  180 (208)
T 2hpk_A          177 GKLE  180 (208)
T ss_dssp             SSBC
T ss_pred             CcCc
Confidence            8875

>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A

Probab=99.06  E-value=1.3e-10  Score=86.28  Aligned_cols=65  Identities=18%  Similarity=0.315  Sum_probs=59.3

Q ss_pred             hhhHHHHhhhh-cCCCCCCcccHHHHHHHHHHhccCCCCCCC--CHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          303 SLTETDAFAFL-KADNDGDYITYSGFCEALEQLNLTGHKHGL--ADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       303 ~~~l~~~F~~~-D~~~~~G~i~~~el~~~l~~~g~~~~~~~~--~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ...++.+|+.| |+|++.|+|+.+||+.+|..+|     ..+  ++++++.++..+|.|++|.|+|+||+..+
T Consensus         4 ~~~l~~~F~~~~D~d~~~G~i~~~el~~~l~~~g-----~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~   71 (76)
T 1qx2_A            4 PEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLG-----PSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMM   71 (76)
T ss_dssp             HHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHG-----GGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCCCcCeECHHHHHHHHHHhC-----CCcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence            45789999999 9988559999999999999999     778  88999999999999999999999999665

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=99.06  E-value=1.2e-10  Score=97.37  Aligned_cols=118  Identities=14%  Similarity=0.197  Sum_probs=89.3

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc-------
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK-------  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~-------  374 (447)
                      ....++++|..+|.|++ |+|+.+||+.+|..+|     ..+++++++.++..+|.|++|.|+|+||+..+..       
T Consensus         4 ~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~~-----~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~   77 (142)
T 2bl0_C            4 QVSEFKEAFELFDSERT-GFITKEGLQTVLKQFG-----VRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTS   77 (142)
T ss_dssp             HHHHHHHHHHHHCTTCS-SEEEHHHHHHHHHHHT-----CCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCCh
Confidence            45678999999999999 9999999999999999     8899999999999999999999999999977643       


Q ss_pred             ----cCcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          375 ----TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       375 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                          ...+...|.+..|.+...|.......+|..++...     +..  ....+| +.+|.|+
T Consensus        78 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~-----~~~--~~~~~d-~~dg~i~  132 (142)
T 2bl0_C           78 EDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHE-----FAE--FLGITE-TEKGQIR  132 (142)
T ss_dssp             HHHHHHHHHHTCCSSCSCEEHHHHHHHHHHSSSCCCHHH-----HHH--HHHHHC-CSSSEEC
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHH-----HHH--HHHHhC-CCCCcEe
Confidence                12234556677777777776555555554333222     222  234566 7788765

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A

Probab=99.05  E-value=2.1e-11  Score=110.85  Aligned_cols=120  Identities=11%  Similarity=-0.019  Sum_probs=94.7

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc----c
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----T  375 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~----~  375 (447)
                      ......++++|+.+|+|++ |+|+.+||+.+|+.+|     ..+++++++.+++.+|.|++|.|+|+||+..+..    .
T Consensus        47 ~~e~~~l~~~F~~~D~d~~-G~I~~~El~~~l~~~g-----~~~~~~~~~~l~~~~D~d~dg~I~~~EF~~~~~~~~~l~  120 (220)
T 3sjs_A           47 LDQYTRIYQWFMGVDRDRS-GTLEINELMMGQFPGG-----IRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKFMELAY  120 (220)
T ss_dssp             HHHHHHHHHHHHHHCTTCC-SSBCHHHHHHCCBGGG-----BCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHcC-----CCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHHHHH
Confidence            4556788999999999999 9999999999999999     8899999999999999999999999999976632    4


Q ss_pred             CcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          376 TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       376 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                      ..+...|.+..|.++..|.......+|..++...     +..  ....+| +.+|.|+
T Consensus       121 ~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~-----~~~--l~~~~d-d~dg~I~  170 (220)
T 3sjs_A          121 NLFVMNARARSGTLEPHEILPALQQLGFYINQRT-----SLL--LHRLFA-RGMAFCD  170 (220)
T ss_dssp             HHHHHHCCSSTTEECHHHHHHHHHHHTCCCCHHH-----HHH--HHHHHC---CCSEE
T ss_pred             HHHHHHCCCCCCCCcHHHHHHHHHHhCCCCCHHH-----HHH--HHHHhc-CCCCcCc
Confidence            4556778888898888887766667776544332     222  344667 7778765

>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A

Probab=99.04  E-value=1.3e-10  Score=87.50  Aligned_cols=68  Identities=31%  Similarity=0.437  Sum_probs=59.5

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      .....++ +|+.+|.|++ |+|+.+||+.+|..+|.    ..+++++++.++..+|.|++|.|+|+||+..+..
T Consensus         6 ~~~~~l~-~F~~~D~d~~-G~i~~~el~~~l~~~g~----~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~   73 (81)
T 1c7v_A            6 DEEEILR-AFKVFDANGD-GVIDFDEFKFIMQKVGE----EPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKK   73 (81)
T ss_dssp             -CHHHHH-HHHHHSCSGG-GEECHHHHHHHSSTTTT----CCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHC
T ss_pred             cHHHHHH-HHHHHCCCCC-CcCCHHHHHHHHHHhCC----CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence            3456788 9999999999 99999999999988761    3488999999999999999999999999976654

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A

Probab=99.04  E-value=4.1e-10  Score=95.36  Aligned_cols=67  Identities=13%  Similarity=0.121  Sum_probs=62.4

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      .....++.+|+.||+|++ |+|+.+||+.+|..+|     ..+++++++.++..+|.|++|.|+|+||+..+.
T Consensus        45 ~~~~~l~~~F~~~D~d~d-G~I~~~El~~~l~~~g-----~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~  111 (147)
T 1wy9_A           45 SKLEAFKVKYMEFDLNGN-GDIDIMSLKRMLEKLG-----VPKTHLELKRLIREVSSGSEETFSYSDFLRMML  111 (147)
T ss_dssp             HHHHHHHHHHTTSCCCTT-SSEEHHHHHHHHHHTT-----CCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence            456789999999999999 9999999999999999     889999999999999999999999999996663

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A

Probab=99.04  E-value=1.7e-10  Score=92.04  Aligned_cols=66  Identities=29%  Similarity=0.455  Sum_probs=60.5

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh---ccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQL---NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~---g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .....++.+|+.+|+|++ |+|+.+||+.+|..+   |     ..+++++++.+++.+|.|++|.|+|+||+..+
T Consensus        38 ~~~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~~~~~g-----~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~  106 (108)
T 1rro_A           38 MSASQVKDIFRFIDNDQS-GYLDGDELKYFLQKFQSDA-----RELTESETKSLMDAADNDGDGKIGADEFQEMV  106 (108)
T ss_dssp             SCHHHHHHHHHHHCTTCS-SEECTHHHHTGGGGTCTTS-----CCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHH
T ss_pred             ccHHHHHHHHHHhCCCCC-CcCCHHHHHHHHHHHhhcc-----CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            345678999999999999 999999999999998   6     77999999999999999999999999999655

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}

Probab=99.04  E-value=1.6e-10  Score=96.73  Aligned_cols=67  Identities=24%  Similarity=0.414  Sum_probs=62.3

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ....++.+|+.+|+|++ |+|+.+||+.+|..+|     ..+++++++.++..+|.|+||.|+|+||+..|..
T Consensus        74 ~~~~l~~~F~~~D~d~~-G~I~~~El~~~l~~~g-----~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  140 (143)
T 3j04_B           74 PEDVIRNAFACFDEEAS-GFIHEDHLRELLTTMG-----DRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKH  140 (143)
T ss_dssp             CHHHHHHHHTTSCSSSC-CCCCTTTHHHHHHTSS-----SCCCHHHHHHHHHHTTCCSSSCCCSTHHHHHHHS
T ss_pred             cHHHHHHHHHHHCCCCC-CeEcHHHHHHHHHHcC-----CCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHhc
Confidence            44678999999999999 9999999999999999     8899999999999999999999999999977654

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A

Probab=99.04  E-value=3.9e-10  Score=94.97  Aligned_cols=66  Identities=23%  Similarity=0.405  Sum_probs=61.8

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ....++.+|+.+|+|++ |+|+.+||+.+|..+|     ..+++++++.++..+|.|++|.|+|+||+..|.
T Consensus        81 ~~~~~~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~  146 (148)
T 1m45_A           81 KTEDFVKAFQVFDKEST-GKVSVGDLRYMLTGLG-----EKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVL  146 (148)
T ss_dssp             CTHHHHHHHHTTCSSSS-SEEEHHHHHHHHHHST-----TCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHH
T ss_pred             cHHHHHHHHHHhCCCCC-CcCCHHHHHHHHHHcC-----CCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence            44678999999999999 9999999999999999     889999999999999999999999999997764

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}

Probab=99.04  E-value=1.3e-10  Score=101.89  Aligned_cols=100  Identities=11%  Similarity=0.140  Sum_probs=77.2

Q ss_pred             hHHHHhHHHHHH---HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceee
Q 013259          288 SEAVFGMFKCLL---RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVD  364 (447)
Q Consensus       288 ~~~v~~~~~~~~---~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~  364 (447)
                      ...++..+...+   ......++++|..+|+|++ |+|+.+||+.+|+.+|       +++.+++.++..+|.|++|.|+
T Consensus        20 ~~~~l~~~~~~l~~~~~~~~~l~~~F~~~D~d~~-G~i~~~El~~~l~~~g-------~~~~~~~~~~~~~D~d~~g~i~   91 (180)
T 3mse_B           20 RNIIINIMAHELSVINNHIKYINELFYKLDTNHN-GSLSHREIYTVLASVG-------IKKWDINRILQALDINDRGNIT   91 (180)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCS-SSEEHHHHHHHHHHTT-------CCHHHHHHHHHHHCTTCCSEEC
T ss_pred             HHHHHHHHHHHccCCHHHHHHHHHHHHHhCCCCC-CcCCHHHHHHHHHHcC-------CCHHHHHHHHHHhCCCCCCcCc
Confidence            344555555444   4567899999999999999 9999999999999999       5578999999999999999999


Q ss_pred             hHHHHHHHhcc---------CcccccccCCCccccccccc
Q 013259          365 YKEFQQRIWKT---------TWSDQRNDLNDEDEDGFVKS  395 (447)
Q Consensus       365 ~~EF~~~~~~~---------~~~~~~~~~~~~~~~~~~~~  395 (447)
                      |+||+..+...         ..+...|.+..|.+...|..
T Consensus        92 ~~Ef~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~  131 (180)
T 3mse_B           92 YTEFMAGCYRWKNIESTFLKAAFNKIDKDEDGYISKSDIV  131 (180)
T ss_dssp             HHHHHHHHSCCTTC--CHHHHHHHHHCTTCSSCBCHHHHH
T ss_pred             HHHHHHHHHhcccCCHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence            99999766432         12234455666666665543

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.03  E-value=5.5e-10  Score=113.69  Aligned_cols=134  Identities=15%  Similarity=0.145  Sum_probs=88.9

Q ss_pred             hHHHHhHHHHHH--HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHH----HhccCCCCCCCC----------HHHHHHH
Q 013259          288 SEAVFGMFKCLL--RRASLTETDAFAFLKADNDGDYITYSGFCEALE----QLNLTGHKHGLA----------DEETKDL  351 (447)
Q Consensus       288 ~~~v~~~~~~~~--~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~----~~g~~~~~~~~~----------~~~~~~~  351 (447)
                      ..+++..+...+  ......++++|..+|+|+| |.|+.+||..++.    .+|     ..++          +++++.+
T Consensus       313 ~~~~l~~ia~~l~~~~~~~~l~~~F~~~D~d~d-G~I~~~El~~~l~~~~~~~g-----~~~~~~~~~~~~~~~~~~~~~  386 (486)
T 3mwu_A          313 AQAALLYMASKLTTLDETKQLTEIFRKLDTNND-GMLDRDELVRGYHEFMRLKG-----VDSNSLIQNEGSTIEDQIDSL  386 (486)
T ss_dssp             HHHHHHHHHHHHCCHHHHHHHHHHHHHHCTTCS-SSBCHHHHHHHHHHHHHHHT-----CCGGGHHHHTSSCHHHHHHHH
T ss_pred             HHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC-ceeeHHHHHHHHHHhhhhhc-----ccchhcccccchhhHHHHHHH
Confidence            344455555444  4567899999999999999 9999999965554    446     4444          8899999


Q ss_pred             HHHcCCCCCceeehHHHHHHHhcc----------CcccccccCCCcccccccccccccccceEEeccccCCcccccCCCC
Q 013259          352 WVQADIDGNGVVDYKEFQQRIWKT----------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWP  421 (447)
Q Consensus       352 ~~~~D~~~~g~i~~~EF~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  421 (447)
                      |..+|.|+||.|+|+||+..+...          ..+...|.+..|.++.+|........|..++..     ++..  ..
T Consensus       387 ~~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~-----~~~~--~~  459 (486)
T 3mwu_A          387 MPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQME-----ELES--II  459 (486)
T ss_dssp             HHHHCTTCCSSBCHHHHHHHHSCTTTTCCHHHHHHHHHHHCSSCSSSBCSSCC---------------------------
T ss_pred             HHHhcCCCCCcCcHHHHHHHHHhhhccchHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHH-----HHHH--HH
Confidence            999999999999999999776432          234566778888888888776666666544333     3333  56


Q ss_pred             CCCCCCCCcceeE
Q 013259          422 ENYSLSDHARLTV  434 (447)
Q Consensus       422 ~~~~~~~~~~l~~  434 (447)
                      ..+|.+.||.|+.
T Consensus       460 ~~~D~d~dG~I~~  472 (486)
T 3mwu_A          460 EQVDNNKDGEVDF  472 (486)
T ss_dssp             CCCCSSCSSSBCH
T ss_pred             HHhCCCCCCcEeH
Confidence            7889999998863

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A

Probab=99.03  E-value=7.6e-11  Score=100.62  Aligned_cols=120  Identities=11%  Similarity=0.067  Sum_probs=87.7

Q ss_pred             hhhhhHHHHhhhhc-CCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhccC---
Q 013259          301 RASLTETDAFAFLK-ADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTT---  376 (447)
Q Consensus       301 ~~~~~l~~~F~~~D-~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~~---  376 (447)
                      .....++++|..+| .|++ |+|+.+||+.+|+.+|     ..++.++++.++..+|.|++|.|+|+||+..+....   
T Consensus        10 ~~~~~l~~~F~~~D~~~~~-G~i~~~e~~~~l~~~~-----~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~   83 (158)
T 2jnf_A           10 NQVKLLETAFRDFETPEGS-GRVSTDQIGIILEVLG-----IQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEE   83 (158)
T ss_dssp             HHHHHHHHHHHHSBCSSSC-SSEEHHHHHHHHHHTT-----CSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCC
T ss_pred             HHHHHHHHHHHHhCCCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccc
Confidence            34567899999999 9999 9999999999999999     789999999999999999999999999997663211   


Q ss_pred             ------------cccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          377 ------------WSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       377 ------------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                                  .+...|.+..|.+...|........|..++..     ++..  ....+|.+.+|.|+
T Consensus        84 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~-----~~~~--~~~~~D~d~dg~i~  145 (158)
T 2jnf_A           84 VNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSE-----DLDA--MIDEIDADGSGTVD  145 (158)
T ss_dssp             CCTTTTSSTHHHHHHHHCSSSSSSEEHHHHHHHHHHHCTTCCHH-----HHHH--HHHHHCSSCCSEEC
T ss_pred             cchhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCcCCHH-----HHHH--HHHHhCCCCCCcEe
Confidence                        12344556666666666544444444322221     1222  33467778888765

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C

Probab=99.03  E-value=3.5e-11  Score=101.94  Aligned_cols=119  Identities=15%  Similarity=0.143  Sum_probs=87.9

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCC--CCceeehHHHHHHHhccC--
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADID--GNGVVDYKEFQQRIWKTT--  376 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~--~~g~i~~~EF~~~~~~~~--  376 (447)
                      .....++++|..+|.|++ |+|+.+||+.+|..+|     ..++.++++.++..+|.+  ++|.|+|+||+..+....  
T Consensus         7 ~~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~   80 (151)
T 1w7j_B            7 DQLEEFKEAFELFDRVGD-GKILYSQCGDVMRALG-----QNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKN   80 (151)
T ss_dssp             ----CHHHHHHHHCCSSS-SEEESTTHHHHHHHTT-----CCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC-
T ss_pred             HHHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHcC-----CCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhcc
Confidence            456789999999999999 9999999999999999     889999999999999999  999999999997663321  


Q ss_pred             -----------cccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          377 -----------WSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       377 -----------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                                 .+...|.+..|.+...|.......+|..++..     ++..  ....+| +.+|.|+
T Consensus        81 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~-----~~~~--~~~~~d-~~dg~i~  140 (151)
T 1w7j_B           81 RGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEE-----EVET--VLAGHE-DSNGCIN  140 (151)
T ss_dssp             -------CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHH-----HHHH--HHTTCC-CTTSEEE
T ss_pred             CCCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHH-----HHHH--HHHhcc-CCCCeEe
Confidence                       23455666667777666655555555433322     2222  345678 8888875

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A

Probab=99.03  E-value=4.1e-10  Score=95.70  Aligned_cols=68  Identities=12%  Similarity=0.169  Sum_probs=62.7

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      .....++.+|+.||+|++ |+|+.+||+.+|+.+|     ..+++++++.++..+|.|++|.|+|+||+..+..
T Consensus        47 ~~~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~  114 (150)
T 2jjz_A           47 EKLTAFKEKYMEFDLNNE-GEIDLMSLKRMMEKLG-----VPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLG  114 (150)
T ss_dssp             HHHHHHHHHHTTSCCCTT-SSBCHHHHHHHHHHTT-----CCCCHHHHHHHHHHHHTTSCSSBCHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHhCCCCc-CcCCHHHHHHHHHHcC-----CCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence            445678999999999999 9999999999999999     8899999999999999999999999999976643

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A

Probab=99.02  E-value=7.8e-10  Score=94.42  Aligned_cols=67  Identities=22%  Similarity=0.329  Sum_probs=62.2

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      .....++.+|+.+|.|++ |+|+.+||+.+|..+|     ..+++++++.++..+|.|++|.|+|+||+..|.
T Consensus        93 ~~~~~~~~~F~~~D~d~~-G~i~~~el~~~l~~~~-----~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  159 (161)
T 3fwb_A           93 DPLDEIKRAFQLFDDDHT-GKISIKNLRRVAKELG-----ETLTDEELRAMIEEFDLDGDGEINENEFIAICT  159 (161)
T ss_dssp             CHHHHHHHHHHHHCTTCS-SEECHHHHHHHHHHTT-----CCCCHHHHHHHHHTTCSSSSSSEEHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHcCCCC-CeEeHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence            345678999999999999 9999999999999999     889999999999999999999999999997653

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A

Probab=99.02  E-value=9.4e-10  Score=94.85  Aligned_cols=67  Identities=24%  Similarity=0.357  Sum_probs=61.7

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ....+..+|+.+|+|++ |+|+.+||+.+|..+|     ..+++++++.++..+|.|+||.|+|+||+..+..
T Consensus        99 ~~~~~~~~F~~~D~d~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  165 (169)
T 3qrx_A           99 SREEILKAFRLFDDDNS-GTITIKDLRRVAKELG-----ENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK  165 (169)
T ss_dssp             HHHHHHHHHHHHCTTCS-SSBCHHHHHHHHHHTT-----CCCCHHHHHHHHHHHCCSSSSCBCHHHHHHHHC-
T ss_pred             cHHHHHHHHHHhCCCCC-CcCCHHHHHHHHHHcC-----CCCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence            45678899999999999 9999999999999999     8899999999999999999999999999976643

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...

Probab=99.02  E-value=9.9e-11  Score=100.18  Aligned_cols=121  Identities=17%  Similarity=0.203  Sum_probs=92.4

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc-----
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK-----  374 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~-----  374 (447)
                      ......++++|..+|.|++ |.|+.+||+.+|..+|     ..++.+++..++..+|.|++|.|+|+||+..+..     
T Consensus        16 ~~~~~~l~~~F~~~D~d~~-G~i~~~e~~~~l~~~~-----~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~   89 (162)
T 1top_A           16 EEMIAEFKAAFDMFDADGG-GDISTKELGTVMRMLG-----QNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKED   89 (162)
T ss_dssp             HHHHHHHHHHHHTTTCSCS-SEEEGGGHHHHHHHTT-----CCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCC-CcCCHHHHHHHHHHcC-----CCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhccc
Confidence            4567789999999999999 9999999999999999     7899999999999999999999999999976632     


Q ss_pred             ---------cCcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          375 ---------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       375 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                               ...+...|.+..|.+...|........|..++...     +..  ....+|.+.+|.|+
T Consensus        90 ~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~-----~~~--~~~~~d~~~dg~i~  150 (162)
T 1top_A           90 AKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED-----IED--LMKDSDKNNDGRID  150 (162)
T ss_dssp             HHHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHH-----HHH--HHHHHCTTCSSSBC
T ss_pred             cccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHH-----HHH--HHHHhCCCCCCcCc
Confidence                     22345567777787777776655555553332221     221  33456777888765

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A

Probab=99.02  E-value=7.1e-11  Score=104.14  Aligned_cols=120  Identities=11%  Similarity=0.076  Sum_probs=89.1

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHH-----HHHHHhccCCCCCCCCHH-----HHHHHHHHcCCCCCceeehHHHHHH
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFC-----EALEQLNLTGHKHGLADE-----ETKDLWVQADIDGNGVVDYKEFQQR  371 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~-----~~l~~~g~~~~~~~~~~~-----~~~~~~~~~D~~~~g~i~~~EF~~~  371 (447)
                      ....++++|..+|.|++ |+|+.+||+     .+|+.+|     ..++..     +++.+++.+|.|++|.|+|+||+..
T Consensus        14 ~~~~l~~~F~~~D~d~~-G~i~~~El~~~~~~~~l~~~g-----~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~   87 (191)
T 1uhk_A           14 WIGRHKHMFNFLDVNHN-GKISLDEMVYKASDIVINNLG-----ATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEG   87 (191)
T ss_dssp             HHHHHHHHHHHHCTTCC-SEEEHHHHHHHHHHHHHHTSC-----CCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHH
T ss_pred             HHHHHHHHHhhccCCCC-CcCcHHHHHHHHHHHHHHHcC-----CCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHH
Confidence            45678999999999999 999999999     8888888     667776     6899999999999999999999976


Q ss_pred             Hhcc---------------------CcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCc
Q 013259          372 IWKT---------------------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHA  430 (447)
Q Consensus       372 ~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  430 (447)
                      +...                     ..+...|.+..|.+...|.......+|..++...     +..  ....+|.+.+|
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~-----~~~--~~~~~D~d~dG  160 (191)
T 1uhk_A           88 WKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSED-----CEE--TFRVCDIDESG  160 (191)
T ss_dssp             HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHH-----HHH--HHHHSCCCTTS
T ss_pred             HHHHhcchhhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHH-----HHH--HHHHhCCCCCC
Confidence            5221                     3445567777777777776555555554333222     222  33467888888


Q ss_pred             ceeE
Q 013259          431 RLTV  434 (447)
Q Consensus       431 ~l~~  434 (447)
                      .|+.
T Consensus       161 ~i~~  164 (191)
T 1uhk_A          161 QLDV  164 (191)
T ss_dssp             CEEH
T ss_pred             cCcH
Confidence            8763

>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A

Probab=99.01  E-value=2.2e-10  Score=86.67  Aligned_cols=67  Identities=24%  Similarity=0.323  Sum_probs=58.0

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHH----HHHHcCCCCCceeehHHHHHHH
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKD----LWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~----~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ....++.+|+.+|.|++ |+|+.+||+.++..+|.   ...+++++++.    ++..+|.|+||.|+|+||+..+
T Consensus         5 ~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~D~~~dg~I~~~eF~~~~   75 (83)
T 1yx7_A            5 VKAELEAAFKKLDANGD-GYVTALELQTFMVTLDA---YKALSKDKVKEASAKLIKMADKNSDGKISKEEFLNAN   75 (83)
T ss_dssp             SCTHHHHHHHHHSSSCS-SSCSHHHHHHHHHHHTT---CTTTTTTTTHHHHHHHHTTTCSSSCSCCSHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHHcc---ccCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHhh
Confidence            45678999999999999 99999999999999871   12467778888    9999999999999999999654

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8

Probab=99.01  E-value=5.3e-11  Score=105.50  Aligned_cols=96  Identities=16%  Similarity=0.146  Sum_probs=79.1

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc----cCcc
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTWS  378 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~----~~~~  378 (447)
                      ...++++|..+|.|++ |+|+.+||+.+|..+|     ..+++++++.+++.+|.|++|.|+|+||+..+..    ...+
T Consensus        26 ~~~l~~~F~~~D~d~~-G~I~~~El~~~l~~~~-----~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~F   99 (191)
T 1y1x_A           26 NQELMEWFRAVDTDGS-GAISVPELNAALSSAG-----VPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHFILSMREGF   99 (191)
T ss_dssp             TSCHHHHHHHHCTTCS-SSBCHHHHHHHHCBTT-----BCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCC-CcCcHHHHHHHHHHcC-----CCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHHHHH
Confidence            4678999999999999 9999999999997777     7799999999999999999999999999976532    3445


Q ss_pred             cccccCCCcccccccccccccccceE
Q 013259          379 DQRNDLNDEDEDGFVKSSLEQTIGFS  404 (447)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~~~~~~g~~  404 (447)
                      ...|.+..|.++..|........|..
T Consensus       100 ~~~D~d~~G~i~~~e~~~~l~~~g~~  125 (191)
T 1y1x_A          100 RKRDSSGDGRLDSNEVRAALLSSGYQ  125 (191)
T ss_dssp             HHHCTTSSSCBCHHHHHHHHHTTSCC
T ss_pred             HHhCCCCCCeEcHHHHHHHHHHhCCC
Confidence            66677778888777765555555543

>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}

Probab=99.01  E-value=5.4e-10  Score=97.96  Aligned_cols=68  Identities=16%  Similarity=0.191  Sum_probs=60.5

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHH-HhccCCCCCC-C------CHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALE-QLNLTGHKHG-L------ADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~-~~g~~~~~~~-~------~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .....++.+|+.||+|++ |+|+.+||+.+|. .+|     .. +      ++++++.+|..+|.|+||.|+|+||+..+
T Consensus        95 ~~~~~l~~~F~~~D~d~d-G~Is~~El~~~l~~~~g-----~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~  168 (179)
T 3a8r_A           95 GFDNRLRTFFDMVDKNAD-GRLTAEEVKEIIALSAS-----ANKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALL  168 (179)
T ss_dssp             CHHHHHHHHHHHHCTTCS-SCBCHHHHHHHHHHHHH-----TTHHHHHHHHHHHHHHHHHHHHSTTCCSEECHHHHHHHH
T ss_pred             CHHHHHHHHHHHHCCCCC-CcCCHHHHHHHHHHHhc-----cccccccccchHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            455689999999999999 9999999999999 888     65 5      78899999999999999999999999766


Q ss_pred             hc
Q 013259          373 WK  374 (447)
Q Consensus       373 ~~  374 (447)
                      ..
T Consensus       169 ~~  170 (179)
T 3a8r_A          169 LQ  170 (179)
T ss_dssp             C-
T ss_pred             Hh
Confidence            43

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A

Probab=99.00  E-value=4.2e-11  Score=101.34  Aligned_cols=120  Identities=16%  Similarity=0.197  Sum_probs=90.9

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc------
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK------  374 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~------  374 (447)
                      .....++++|..+|.|++ |+|+.+||+.+|..+|     ..++..++..++..+|.+++|.|+|+||+..+..      
T Consensus         8 ~~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~~-----~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~   81 (153)
T 3ox6_A            8 EEIEELREAFREFDKDKD-GYINCRDLGNCMRTMG-----YMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAET   81 (153)
T ss_dssp             HHHHHHHHHHHHHHHHCS-SSCCHHHHHHHHHHTT-----CCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHcC-----CCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhccc
Confidence            345678999999999999 9999999999999999     7899999999999999999999999999976632      


Q ss_pred             ---------cCcccccccCCCcccccccccccccc-cceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          375 ---------TTWSDQRNDLNDEDEDGFVKSSLEQT-IGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       375 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                               ...+...|.+..|.+...|....... .|..++...     +..  ....+|.+.+|.|+
T Consensus        82 ~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~-----~~~--~~~~~d~~~dg~i~  143 (153)
T 3ox6_A           82 ADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRD-----IEE--IIRDVDLNGDGRVD  143 (153)
T ss_dssp             HHHHCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSCCCHHH-----HHH--HHHHHCSSSSSSBC
T ss_pred             cccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHH-----HHH--HHHHhCCCCCCeEe
Confidence                     12234556677777777776555554 554333222     222  33467778888765

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=99.00  E-value=8.6e-10  Score=92.36  Aligned_cols=67  Identities=22%  Similarity=0.396  Sum_probs=62.1

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ....++.+|+.+|+|++ |+|+.+||+.+|..+|     ..+++++++.++..+|.|++|.|+|+||+..+..
T Consensus        74 ~~~~l~~~F~~~D~d~~-G~i~~~e~~~~l~~~g-----~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  140 (145)
T 2bl0_B           74 QSKEMLDAFRALDKEGN-GTIQEAELRQLLLNLG-----DALTSSEVEELMKEVSVSGDGAINYESFVDMLVT  140 (145)
T ss_dssp             GHHHHHHHHHHHCSSSS-SEEEHHHHHHHHHHSS-----SCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHH
T ss_pred             cHHHHHHHHHHhCCCCC-CeEcHHHHHHHHHHcC-----CCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHHHh
Confidence            34678999999999999 9999999999999999     8899999999999999999999999999977754

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}

Probab=98.99  E-value=7.6e-11  Score=103.99  Aligned_cols=132  Identities=14%  Similarity=0.146  Sum_probs=94.5

Q ss_pred             hhHHHHhHHHHHH--HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh-----------ccCCCCCCCCHHHHHHHHH
Q 013259          287 WSEAVFGMFKCLL--RRASLTETDAFAFLKADNDGDYITYSGFCEALEQL-----------NLTGHKHGLADEETKDLWV  353 (447)
Q Consensus       287 w~~~v~~~~~~~~--~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~-----------g~~~~~~~~~~~~~~~~~~  353 (447)
                      .+..++..+...+  ......++++|..+|.|++ |.|+.+||..+|..+           |     ..++++++..++.
T Consensus        21 ~~~~~l~~~~~~~~~~~~~~~l~~~F~~~D~d~~-G~i~~~e~~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~   94 (191)
T 3khe_A           21 LAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGD-GQLDRKELIEGYRKLMQWKGDTVSDLD-----SSQIEAEVDHILQ   94 (191)
T ss_dssp             HHHHHHHHHHHHSSCTTTTHHHHHHHHHHCTTCS-SEECHHHHHHHHHHHHC-----CCHHH-----HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCHHHHHHHHHHHHHHcCCCC-CCCcHHHHHHHHHHHHhhccccccccc-----chhhHHHHHHHHH
Confidence            3455666666555  4667899999999999999 999999999999987           5     5578899999999


Q ss_pred             HcCCCCCceeehHHHHHHHhc----------cCcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCC
Q 013259          354 QADIDGNGVVDYKEFQQRIWK----------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPEN  423 (447)
Q Consensus       354 ~~D~~~~g~i~~~EF~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  423 (447)
                      .+|.|++|.|+|+||+..+..          ...+...|.+..|.+...|......  |..++.     .++..  ....
T Consensus        95 ~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~--~~~~~~-----~~~~~--~~~~  165 (191)
T 3khe_A           95 SVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFG--VTEVDD-----ETWHQ--VLQE  165 (191)
T ss_dssp             HTCTTCSSSEEHHHHHHHHSCHHHHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTT--SSCCCH-----HHHHH--HHHH
T ss_pred             HhCCCCCCcCCHHHHHHHHHHhcccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHc--cCCCCH-----HHHHH--HHHH
Confidence            999999999999999976632          2234455666677776666543333  222111     11222  2346


Q ss_pred             CCCCCCccee
Q 013259          424 YSLSDHARLT  433 (447)
Q Consensus       424 ~~~~~~~~l~  433 (447)
                      +|.+.+|.|+
T Consensus       166 ~D~~~dg~i~  175 (191)
T 3khe_A          166 CDKNNDGEVD  175 (191)
T ss_dssp             HCTTCSSSEE
T ss_pred             hCCCCCCCCC
Confidence            7778888876

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}

Probab=98.99  E-value=7e-11  Score=105.46  Aligned_cols=119  Identities=18%  Similarity=0.235  Sum_probs=83.6

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhcc-----
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT-----  375 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~-----  375 (447)
                      .....++++|+.+|+|++ |+|+.+||+.+|..+|     ..+++++++.++..+|.|++|.|+|+||+..+...     
T Consensus        34 ~~~~~l~~~F~~~D~d~~-G~i~~~e~~~~l~~~~-----~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~~~~  107 (204)
T 3e3r_A           34 SGIQGLARFFRQLDRDGS-RSLDADEFRQGLAKLG-----LVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAR  107 (204)
T ss_dssp             ------CHHHHHHCTTCC-SSBCHHHHHHHHHTTT-----CCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCCCHHH
T ss_pred             hhHHHHHHHHHHHccCCC-CCcCHHHHHHHHHHcC-----CCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhhcCchH
Confidence            456688999999999999 9999999999999999     88999999999999999999999999999766331     


Q ss_pred             -----CcccccccCCCcccccccccccccccceEEeccccCCcccccCCCC---------CCCCC-CCCcceeE
Q 013259          376 -----TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWP---------ENYSL-SDHARLTV  434 (447)
Q Consensus       376 -----~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---------~~~~~-~~~~~l~~  434 (447)
                           ..+...|.+..|.+...|........         .+|.+..|.+.         ..+|. +.+|.|+.
T Consensus       108 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~---------~~~~~~~~~~~~~~~~~~~~~~~D~~d~dg~Is~  172 (204)
T 3e3r_A          108 EAVIAAAFAKLDRSGDGVVTVDDLRGVYSGR---------AHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTL  172 (204)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHCCCT---------TCHHHHTTSSCHHHHHHHHHHHHSCSSCCSCEEH
T ss_pred             HHHHHHHHHHhCcCCCCeEeHHHHHHHHccc---------cCCccccCCCChHHHHHHHHHHhhccCCCCcCcH
Confidence                 22344455666666655543322221         12333333332         35787 88998763

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...

Probab=98.99  E-value=9.1e-10  Score=93.74  Aligned_cols=66  Identities=20%  Similarity=0.337  Sum_probs=61.4

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ....++.+|+.+|+|++ |+|+.+||+.+|..+|     ..+++++++.+|+.+|.| ||.|+|+||+..|..
T Consensus        85 ~~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~~~~~~~~~~d~~-dg~i~~~eF~~~~~~  150 (156)
T 1wdc_B           85 SEETIRNAFAMFDEQET-KKLNIEYIKDLLENMG-----DNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKG  150 (156)
T ss_dssp             CHHHHHHHHHTTCTTCC-SCEEHHHHHHHHHHSS-----SCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHCcCCC-CccCHHHHHHHHHHhC-----CCCCHHHHHHHHHhcCCC-CCEEeHHHHHHHHhc
Confidence            44678999999999999 9999999999999999     889999999999999999 999999999977754

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A

Probab=98.99  E-value=1.5e-09  Score=90.94  Aligned_cols=65  Identities=20%  Similarity=0.404  Sum_probs=60.3

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .....+..+|+.+|+|++ |+|+.+||+.++..+|     ..+++++++.++..+| |++|.|+|+||+..|
T Consensus        81 ~~~~~~~~~F~~~D~d~~-G~i~~~e~~~~l~~~~-----~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~l  145 (147)
T 4ds7_A           81 DSEQELLEAFKVFDKNGD-GLISAAELKHVLTSIG-----EKLTDAEVDEMLREVS-DGSGEINIKQFAALL  145 (147)
T ss_dssp             HHHHHHHHHHHHHCTTCS-SEECHHHHHHHHHHTT-----CCCCHHHHHHHHHHHS-SSCSSEEHHHHHHHT
T ss_pred             CcHHHHHHHHHHhCCCCC-CeECHHHHHHHHHHcC-----CCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHH
Confidence            345678899999999999 9999999999999999     8899999999999999 999999999999655

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A

Probab=98.98  E-value=6.5e-11  Score=97.64  Aligned_cols=112  Identities=14%  Similarity=0.113  Sum_probs=81.4

Q ss_pred             hHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh---cc------
Q 013259          305 TETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW---KT------  375 (447)
Q Consensus       305 ~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~---~~------  375 (447)
                      +++++|..+|+|++ |+|+.+||..++..+|     ..+++++++.+++.+|.|++|.|+|+||+..+.   ..      
T Consensus         1 ~l~~~F~~~D~~~~-g~i~~~e~~~~l~~~~-----~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~   74 (134)
T 1jfj_A            1 MAEALFKEIDVNGD-GAVSYEEVKAFVSKKR-----AIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDK   74 (134)
T ss_dssp             CHHHHHHHHCTTCS-SEEEHHHHHHHHHTTC-----CSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHH
T ss_pred             CHHHHHHHHCCCCC-CcCCHHHHHHHHHHcC-----CCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCH
Confidence            36789999999999 9999999999999999     788999999999999999999999999997663   11      


Q ss_pred             ----CcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          376 ----TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       376 ----~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                          ..+...|.+..|.+...|........|...         +..  ....+|.+.+|.|+
T Consensus        75 ~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~---------~~~--~~~~~D~~~dg~i~  125 (134)
T 1jfj_A           75 IGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEK---------VAE--QVMKADANGDGYIT  125 (134)
T ss_dssp             HHHHHHHHHHCCSSSSEEEHHHHHHHHTTTTCHH---------HHH--HHHHHHCSSSSEEE
T ss_pred             HHHHHHHHHHCCCCCCccCHHHHHHHHHHhCHHH---------HHH--HHHHhCCCCCCcEe
Confidence                222344555566666555544333333211         111  23456667777765

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*

Probab=98.98  E-value=2.5e-10  Score=96.12  Aligned_cols=117  Identities=15%  Similarity=0.173  Sum_probs=87.5

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHc---CCCCCceeehHHHHHHHhcc---
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQA---DIDGNGVVDYKEFQQRIWKT---  375 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~---D~~~~g~i~~~EF~~~~~~~---  375 (447)
                      ....++++|..+|+|++ |+|+.+||+.+|..+|     ..++.+++..++..+   |.++ |.|+|+||+..+...   
T Consensus         6 ~~~~l~~~F~~~D~~~~-G~i~~~el~~~l~~~~-----~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~   78 (149)
T 2mys_C            6 AADDFKEAFLLFDRTGD-AKITASQVGDIARALG-----QNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANN   78 (149)
T ss_pred             HHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhcc
Confidence            45678999999999999 9999999999999999     789999999999999   9999 999999999766432   


Q ss_pred             ----------CcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          376 ----------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       376 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                                ..+...|.+..|.+...+.......+|..++..     ++..  .... |.+.+|.|+
T Consensus        79 ~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~-----~~~~--~~~~-d~~~dg~i~  138 (149)
T 2mys_C           79 KDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEE-----EVEE--LMKG-QEDSNGCIN  138 (149)
T ss_pred             CCcchHHHHHHHHHHhCCCCCceEcHHHHHHHHHHhCCCCCHH-----HHHH--HHhh-CCCCCCcEe
Confidence                      123455666677777766655555555433222     2222  2234 778888765

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=98.98  E-value=7.7e-10  Score=92.46  Aligned_cols=65  Identities=18%  Similarity=0.311  Sum_probs=60.1

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .....++.+|+.+|+|++ |+|+.+||+.+|..+|     ..+++++++.++..+| |++|.|+|+||+..|
T Consensus        76 ~~~~~~~~~F~~~D~d~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~  140 (142)
T 2bl0_C           76 TSEDILRQAFRTFDPEGT-GYIPKAALQDALLNLG-----DRLKPHEFAEFLGITE-TEKGQIRYDNFINTM  140 (142)
T ss_dssp             CCHHHHHHHHHHTCCSSC-SCEEHHHHHHHHHHSS-----SCCCHHHHHHHHHHHC-CSSSEECSHHHHTTT
T ss_pred             ChHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHcC-----CCCCHHHHHHHHHHhC-CCCCcEeHHHHHHHH
Confidence            355678999999999999 9999999999999999     8899999999999999 999999999999544

>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C

Probab=98.98  E-value=7.2e-11  Score=101.52  Aligned_cols=102  Identities=7%  Similarity=-0.018  Sum_probs=82.3

Q ss_pred             hhhhhHHHHhhhhcC--CCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc----
Q 013259          301 RASLTETDAFAFLKA--DNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----  374 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~--~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~----  374 (447)
                      .+..+++++|..||.  |++ |+|+..||+.+|+.+|     ..++++++++++. .|.+++|.|+|+||+..+..    
T Consensus         6 eqi~elre~F~~fD~~~d~d-G~I~~~El~~~lr~lG-----~~~t~~el~~~~~-~d~~~~g~i~f~eFl~~~~~~~~~   78 (159)
T 3i5g_C            6 DEIEEVREVFDLFDFWDGRD-GDVDAAKVGDLLRCLG-----MNPTEAQVHQHGG-TKKMGEKAYKLEEILPIYEEMSSK   78 (159)
T ss_dssp             HHHHHHHHHHHHHHHHTTSS-SCEEGGGHHHHHHHTT-----CCCCHHHHHTTTC-CSSTTSCEECHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHCcCCCCC-CeECHHHHHHHHHHcC-----CCCCHHHHHHHHc-ccccCCCcccHHHHHHHHHHhhcc
Confidence            456789999999995  899 9999999999999999     8899999999874 58889999999999976532    


Q ss_pred             ---------cCcccccccCCCcccccccccccccccceEEeccc
Q 013259          375 ---------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAV  409 (447)
Q Consensus       375 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  409 (447)
                               ...+...|.+..|.|...|.......+|.+++..-
T Consensus        79 ~~~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~e  122 (159)
T 3i5g_C           79 DTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQ  122 (159)
T ss_dssp             CTTCCHHHHHHHHHHHCTTSSSEECHHHHHHHHHHSSSCCCHHH
T ss_pred             cccchHHHHHHHHHHHhcCCCCcCcHHHHHHHHHHhCCCCCHHH
Confidence                     11245667788888888887777777786655543

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...

Probab=98.98  E-value=1.2e-09  Score=92.97  Aligned_cols=68  Identities=19%  Similarity=0.340  Sum_probs=62.8

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH--cCCCCCceeehHHHHHHHhcc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQ--ADIDGNGVVDYKEFQQRIWKT  375 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~--~D~~~~g~i~~~EF~~~~~~~  375 (447)
                      ....++.+|+.+|.|++ |+|+.+||+.+|..+|     ..+++++++.++..  +|.|++|.|+|+||+..|...
T Consensus        82 ~~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~  151 (156)
T 1wdc_C           82 TFADYMEAFKTFDREGQ-GFISGAELRHVLTALG-----ERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAG  151 (156)
T ss_dssp             CHHHHHHHHHTTCSSSS-SEEEHHHHHHHHHHSS-----SCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHHC
T ss_pred             hHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHcC-----CCCCHHHHHHHHHHhCCCCCCCCcEeHHHHHHHHhcC
Confidence            34678999999999999 9999999999999999     88999999999999  999999999999999877553

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*

Probab=98.98  E-value=9.1e-11  Score=103.86  Aligned_cols=120  Identities=12%  Similarity=0.076  Sum_probs=85.8

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHH-----HHHHHhccCCCCCCCCHH-----HHHHHHHHcCCCCCceeehHHHHH
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFC-----EALEQLNLTGHKHGLADE-----ETKDLWVQADIDGNGVVDYKEFQQ  370 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~-----~~l~~~g~~~~~~~~~~~-----~~~~~~~~~D~~~~g~i~~~EF~~  370 (447)
                      .....++++|..+|.|++ |+|+.+||+     .+|+.+|     ..++..     +++.++..+|.|++|.|+|+||+.
T Consensus        17 ~~~~~l~~~F~~~D~d~~-G~i~~~El~~~~~~~~l~~~g-----~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~   90 (195)
T 1qv0_A           17 RWIKRHKHMFDFLDINGN-GKITLDEIVSKASDDICAKLE-----ATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLD   90 (195)
T ss_dssp             HHHHHHHHHHHHHCTTCS-SCBCHHHHHHHHHHTHHHHTT-----CCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHH
T ss_pred             HHHHHHHHHHhHcCCCCC-CcCcHHHHHHHHHHHHHHHcC-----CCccHHHHHHHHHHHHHHHcCCCCCceEcHHHHHH
Confidence            345678999999999999 999999999     7888888     666666     689999999999999999999997


Q ss_pred             HHhcc---------------------CcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCC
Q 013259          371 RIWKT---------------------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDH  429 (447)
Q Consensus       371 ~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  429 (447)
                      .+...                     ..+...|.+..|.+...|.......+|..++...     +..  ....+|.+.+
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~-----~~~--~~~~~D~d~d  163 (195)
T 1qv0_A           91 GWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQED-----CEA--TFRHCDLDNA  163 (195)
T ss_dssp             HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHH-----HHH--HHHHSCCCTT
T ss_pred             HHHHHHhhhhhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHH-----HHH--HHHHhCCCCC
Confidence            55211                     3455566777777777776555555554333222     222  3456788888


Q ss_pred             ccee
Q 013259          430 ARLT  433 (447)
Q Consensus       430 ~~l~  433 (447)
                      |.|+
T Consensus       164 g~i~  167 (195)
T 1qv0_A          164 GDLD  167 (195)
T ss_dssp             SCEE
T ss_pred             CcCC
Confidence            8876

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A

Probab=98.97  E-value=1.1e-09  Score=93.30  Aligned_cols=67  Identities=25%  Similarity=0.448  Sum_probs=62.4

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      .....++.+|+.+|+|++ |+|+.+||+.+|..+|     ..+++++++.++..+|.|++|.|+|+||+..|.
T Consensus        88 ~~~~~~~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~  154 (158)
T 2jnf_A           88 QMQQELREAFRLYDKEGN-GYISTDVMREILAELD-----ETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMT  154 (158)
T ss_dssp             TTSSTHHHHHHHHCSSSS-SSEEHHHHHHHHHHHC-----TTCCHHHHHHHHHHHCSSCCSEECSHHHHHHTS
T ss_pred             hHHHHHHHHHHHhCCCCC-CeEcHHHHHHHHHHhC-----CcCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            456689999999999999 9999999999999999     889999999999999999999999999997653

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A

Probab=98.97  E-value=5.3e-10  Score=93.85  Aligned_cols=119  Identities=19%  Similarity=0.247  Sum_probs=91.6

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc------
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK------  374 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~------  374 (447)
                      .....++++|..+|.|++ |+|+.+||+.+|..+|     ..++.+++..++..+|.+++|.|+|+||+..+..      
T Consensus         8 ~~~~~l~~~F~~~D~~~~-G~i~~~e~~~~l~~~~-----~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~~   81 (147)
T 4ds7_A            8 EQIAEFKEAFALFDKDNS-GSISASELATVMRSLG-----LSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCND   81 (147)
T ss_dssp             HHHHHHHHHHHHHCTTCS-SEEEHHHHHHHHHHTT-----CCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTHH
T ss_pred             HHHHHHHHHHHHHCCCCC-CCcCHHHHHHHHHHhC-----CCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccCCC
Confidence            456788999999999999 9999999999999999     8899999999999999999999999999976632      


Q ss_pred             -----cCcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          375 -----TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       375 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                           ...+...|.+..|.+...|.......+|..++...     +..  ....+| +.+|.|+
T Consensus        82 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~-----~~~--~~~~~d-~~dg~i~  137 (147)
T 4ds7_A           82 SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAE-----VDE--MLREVS-DGSGEIN  137 (147)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHH-----HHH--HHHHHS-SSCSSEE
T ss_pred             cHHHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHH-----HHH--HHHHhc-CCCCcCc
Confidence                 22345567777788887777666666664433322     221  233556 7788765

>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A

Probab=98.97  E-value=1.1e-09  Score=88.20  Aligned_cols=64  Identities=22%  Similarity=0.280  Sum_probs=58.5

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ....++++|+.+|+ ++ |+|+.+|++.+|.+.|       ++++++.+|+...|.|+||+|+|+||+.+|+.
T Consensus        31 e~~~y~~iF~~lD~-~d-G~Isg~elr~~~~~sg-------Lp~~~L~~Iw~laD~d~dG~Ld~~EF~~aM~L   94 (121)
T 3fia_A           31 ERAKHDQQFHSLKP-IS-GFITGDQARNFFFQSG-------LPQPVLAQIWALADMNNDGRMDQVEFSIAMKL   94 (121)
T ss_dssp             HHHHHHHHHHHTCC-BT-TBEEHHHHHHHHGGGC-------CCHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCC-CC-CeECHHHHHHHHHHcC-------CCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHH
Confidence            45678899999998 89 9999999999999888       88999999999999999999999999977754

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C

Probab=98.96  E-value=7.2e-10  Score=93.69  Aligned_cols=64  Identities=17%  Similarity=0.374  Sum_probs=58.2

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ....++.+|+.+|+|++ |+|+.+||+.+|..+|     ..+++++++.++..+| |++|.|+|+||+..|
T Consensus        85 ~~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~  148 (151)
T 1w7j_B           85 TYEDYLEGFRVFDKEGN-GKVMGAELRHVLTTLG-----EKMTEEEVETVLAGHE-DSNGCINYEAFLKHI  148 (151)
T ss_dssp             ---CCHHHHHTTCTTSS-SEEEHHHHHHHHHHSS-----SCCCHHHHHHHHTTCC-CTTSEEEHHHHHHHT
T ss_pred             cHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHcC-----CCCCHHHHHHHHHhcc-CCCCeEeHHHHHHHH
Confidence            34577889999999999 9999999999999999     8899999999999999 999999999999765

>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A

Probab=98.96  E-value=5.7e-10  Score=87.51  Aligned_cols=66  Identities=20%  Similarity=0.288  Sum_probs=58.3

Q ss_pred             hhhhhHHHHhhhhc-CCCCCC-cccHHHHHHHHHH-h----ccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          301 RASLTETDAFAFLK-ADNDGD-YITYSGFCEALEQ-L----NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       301 ~~~~~l~~~F~~~D-~~~~~G-~i~~~el~~~l~~-~----g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .....++.+|..|| +|++ | +|+.+||+.+|+. +    |     ..+++++++.++..+|.|+||.|+|+||+..+
T Consensus        10 ~~~~~l~~~F~~~Dd~d~~-G~~I~~~el~~~l~~~~~~~~~-----~~~~~~~~~~l~~~~D~~~dg~I~~~EF~~~~   82 (99)
T 1qls_A           10 RCIESLIAIFQKHAGRDGN-NTKISKTEFLIFMNTELAAFTQ-----NQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLI   82 (99)
T ss_dssp             HHHHHHHHHHHHHHTTSSC-TTCBCHHHHHHHHTTTSHHHHH-----HCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCC-cCeeCHHHHHHHHHHHcchhcc-----ccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            34567899999998 9999 9 9999999999984 3    4     45888999999999999999999999999665

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A

Probab=98.96  E-value=2.2e-10  Score=113.70  Aligned_cols=120  Identities=16%  Similarity=0.241  Sum_probs=97.1

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhcc-----
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT-----  375 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~-----  375 (447)
                      .....++++|+.+|.|++ |.|+.+||+.+|..+|     ..++.++++.+++.+|.|++|.|+|+||+..+...     
T Consensus       309 eei~el~~~F~~fD~D~d-G~Is~~EL~~~L~~lg-----~~~s~eel~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~~~~  382 (450)
T 3sg6_A          309 EQIAEFKEAFSLFDKDGD-GTITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTD  382 (450)
T ss_dssp             HHHHHHHHHHHHHCTTCS-SEECHHHHHHHHHHTT-----CCCCHHHHHHHHHTTCTTSSSSEEHHHHHHHHHC------
T ss_pred             HHHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhccCCCCcccHHHHHHHHHhhccccc
Confidence            455789999999999999 9999999999999999     88999999999999999999999999999766432     


Q ss_pred             ------CcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          376 ------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       376 ------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                            ..+...|.+.+|.+...|.......+|..++...     +..  ....+|.+.+|.|+
T Consensus       383 ~~e~l~~aFk~fD~D~dG~Is~eELr~~L~~lG~~ls~ee-----i~~--Lf~~~D~D~DG~Is  439 (450)
T 3sg6_A          383 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE-----VDE--MIREADIDGDGQVN  439 (450)
T ss_dssp             CHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHH-----HHH--HHHHHCTTSSSSEE
T ss_pred             hhhHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHH-----HHH--HHHHhCCCCCCcEe
Confidence                  2456778888898888888777777776554433     222  34567888888875

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A

Probab=98.95  E-value=1.1e-10  Score=101.49  Aligned_cols=98  Identities=12%  Similarity=0.048  Sum_probs=78.7

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc----cCc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTW  377 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~----~~~  377 (447)
                      ....++++|..+|+|++ |+|+.+||+.+|+.+|.    .++++++++.++..+|.|++|.|+|+||+..+..    ...
T Consensus         5 ~~~~l~~~F~~~D~d~~-G~i~~~e~~~~l~~~~~----~~~~~~~~~~l~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~   79 (172)
T 2znd_A            5 DQSFLWNVFQRVDKDRS-GVISDTELQQALSNGTW----TPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNV   79 (172)
T ss_dssp             -CHHHHHHHHHHCTTCS-SCEEHHHHHHHCCCSSS----SCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHhCCCCC-CcCcHHHHHHHHHhcCC----CCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHHHHHHH
Confidence            45678999999999999 99999999999988762    4589999999999999999999999999976522    334


Q ss_pred             ccccccCCCcccccccccccccccceE
Q 013259          378 SDQRNDLNDEDEDGFVKSSLEQTIGFS  404 (447)
Q Consensus       378 ~~~~~~~~~~~~~~~~~~~~~~~~g~~  404 (447)
                      +...|.+..|.++..|........|..
T Consensus        80 F~~~D~d~~G~i~~~el~~~l~~~g~~  106 (172)
T 2znd_A           80 FRTYDRDNSGMIDKNELKQALSGFGYR  106 (172)
T ss_dssp             HHHHCTTCSSEECHHHHHHHHHHTTCC
T ss_pred             HHHHCCCCCCccCHHHHHHHHHHcCCC
Confidence            566677788888777765555555543

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...

Probab=98.95  E-value=1.3e-10  Score=98.95  Aligned_cols=119  Identities=9%  Similarity=0.012  Sum_probs=88.9

Q ss_pred             hhhhhHHHHhhhhcC--CCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhccC--
Q 013259          301 RASLTETDAFAFLKA--DNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTT--  376 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~--~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~~--  376 (447)
                      .....++++|..+|.  |++ |+|+.+||+.+|..+|     ..++.+++..+ ..+|.|++|.|+|+||+..+....  
T Consensus         6 ~~~~~l~~~F~~~D~~~d~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~   78 (156)
T 1wdc_C            6 DEIDDLKDVFELFDFWDGRD-GAVDAFKLGDVCRCLG-----INPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDC   78 (156)
T ss_dssp             HHHHHHHHHHHHHHHHTCSS-SCEEGGGHHHHHHHTT-----CCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHccCCCCC-CCCcHHHHHHHHHHcC-----CCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhc
Confidence            345678999999999  999 9999999999999999     88999999999 999999999999999997664321  


Q ss_pred             ----------cccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCC--CCCCCCccee
Q 013259          377 ----------WSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPEN--YSLSDHARLT  433 (447)
Q Consensus       377 ----------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~  433 (447)
                                .+...|.+..|.+...|.......+|..++...     +..  ....  +|.+.+|.|+
T Consensus        79 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~-----~~~--~~~~~~~D~d~dg~i~  140 (156)
T 1wdc_C           79 EQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDED-----VDE--IIKLTDLQEDLEGNVK  140 (156)
T ss_dssp             CCCCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHH-----HHH--HHHHHTCCCCTTSEEE
T ss_pred             cCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHH-----HHH--HHHHhCCCCCCCCcEe
Confidence                      234556666777777666555555554332221     111  2235  7788888765

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}

Probab=98.95  E-value=2.1e-10  Score=101.28  Aligned_cols=118  Identities=14%  Similarity=0.113  Sum_probs=87.0

Q ss_pred             hhhhHHHHhhhh-cCCCCCCcccHHHHHHHHHHh----ccCCCCCCCCHHHHHHHH-----------HHcCCCCCceeeh
Q 013259          302 ASLTETDAFAFL-KADNDGDYITYSGFCEALEQL----NLTGHKHGLADEETKDLW-----------VQADIDGNGVVDY  365 (447)
Q Consensus       302 ~~~~l~~~F~~~-D~~~~~G~i~~~el~~~l~~~----g~~~~~~~~~~~~~~~~~-----------~~~D~~~~g~i~~  365 (447)
                      ....++++|..+ |.|++ |+|+.+||..++..+    |     ..++.++++.++           ..+|.|+||.|+|
T Consensus        10 ~~~~l~~~F~~~~D~d~d-G~i~~~E~~~~l~~~~~~~g-----~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~~   83 (191)
T 2ccm_A           10 QRNKILRVFNTFYDCNHD-GVIEWDDFELAIKKICNLHS-----WPTDGKKHNEARATLKLIWDGLRKYADENEDEQVTK   83 (191)
T ss_dssp             HHHHHHHHHHHHTCTTCS-SEECHHHHHHHHHHHHHHHT-----CCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEH
T ss_pred             HHHHHHHhccccccCCCC-CeeeHHHHHHHHHHHHHHhC-----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeECH
Confidence            455789999999 99999 999999999999998    8     778888999998           9999999999999


Q ss_pred             HHHHHHHhcc-------------------CcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCC
Q 013259          366 KEFQQRIWKT-------------------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSL  426 (447)
Q Consensus       366 ~EF~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  426 (447)
                      +||+..+...                   ..+...|.+..|.++..|........|  +     .+.++..  .-..+|.
T Consensus        84 ~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g--~-----~~~~~~~--~~~~~D~  154 (191)
T 2ccm_A           84 EEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYG--I-----PKSDCDA--AFDTLSD  154 (191)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTTT--C-----CHHHHHH--HHHHHTT
T ss_pred             HHHHHHHHHHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC--C-----CHHHHHH--HHHHhCC
Confidence            9999765321                   122345666667777666554444444  1     1122222  3456788


Q ss_pred             CCCcceeE
Q 013259          427 SDHARLTV  434 (447)
Q Consensus       427 ~~~~~l~~  434 (447)
                      +.+|.|+.
T Consensus       155 d~dG~i~~  162 (191)
T 2ccm_A          155 GGKTMVTR  162 (191)
T ss_dssp             TTTSCCBH
T ss_pred             CCCCCcCH
Confidence            88898763

>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7

Probab=98.95  E-value=1.6e-09  Score=85.69  Aligned_cols=65  Identities=9%  Similarity=0.174  Sum_probs=55.0

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHH-----hccCCCCCCCCH-----------HHHHHHHHHcCCCCCceeehHH
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQ-----LNLTGHKHGLAD-----------EETKDLWVQADIDGNGVVDYKE  367 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~-----~g~~~~~~~~~~-----------~~~~~~~~~~D~~~~g~i~~~E  367 (447)
                      ..++.+|+.||.|++ |+|+.+||+.++..     +|     ...+.           ..++.+|..+|.|+||.|+|+|
T Consensus        20 ~~~~~~F~~~D~d~d-G~I~~~El~~~l~~~~~~~~g-----~~~~~~~~~~~~e~~~~~~~~~~~~~D~d~dG~Is~~E   93 (103)
T 1snl_A           20 FNPKTFFILHDINSD-GVLDEQELEALFTKELEKVYD-----PKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEE   93 (103)
T ss_dssp             CCHHHHHHHHCSSCC-SEEEHHHHHHHHHHHHHTTSC-----CSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHH
T ss_pred             CCHHHHHHHHcCCCC-CcccHHHHHHHHHHHHHHHhc-----cCCCCccHHHHHHHHHHHHHHHHHHcCCCCCCcCCHHH
Confidence            468899999999999 99999999999986     46     33332           3588999999999999999999


Q ss_pred             HHHHHhc
Q 013259          368 FQQRIWK  374 (447)
Q Consensus       368 F~~~~~~  374 (447)
                      |+..+..
T Consensus        94 F~~~~~~  100 (103)
T 1snl_A           94 FLASTQR  100 (103)
T ss_dssp             HHHHHHC
T ss_pred             HHHHHhc
Confidence            9976643

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=98.95  E-value=4.7e-10  Score=114.75  Aligned_cols=135  Identities=14%  Similarity=0.089  Sum_probs=93.8

Q ss_pred             HHHHhHHHHHH--HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCC---CCCCCCHHHHHHHHHHcCCCCCcee
Q 013259          289 EAVFGMFKCLL--RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTG---HKHGLADEETKDLWVQADIDGNGVV  363 (447)
Q Consensus       289 ~~v~~~~~~~~--~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~---~~~~~~~~~~~~~~~~~D~~~~g~i  363 (447)
                      .+++..+...+  ......++++|..+|+|++ |.|+.+||..+|+.++-.+   .....++++++.+|..+|.|+||.|
T Consensus       338 ~a~l~~i~~~~~~~~~~~~l~~~F~~~D~d~d-G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I  416 (504)
T 3q5i_A          338 QAAILFIGSKLTTLEERKELTDIFKKLDKNGD-GQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYI  416 (504)
T ss_dssp             HHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCS-SEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHHCTTCSSSE
T ss_pred             HHHHHHhhccCCcHHHHHHHHHHHHeeCCCCC-CeEcHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhCCCCCCcE
Confidence            34444444444  4566789999999999999 9999999999999872000   0156888999999999999999999


Q ss_pred             ehHHHHHHHhc----------cCcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          364 DYKEFQQRIWK----------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       364 ~~~EF~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                      +|+||+..+..          ...+...|.+..|.++.+|........+       +...++.+  ....+|.+.||.|+
T Consensus       417 ~~~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~-------~~~~~~~~--~~~~~D~d~dG~I~  487 (504)
T 3q5i_A          417 EYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGLTS-------ISEKTWND--VLGEADQNKDNMID  487 (504)
T ss_dssp             EHHHHHHHHSCHHHHTCHHHHHHHHHHHCTTCCSEECHHHHHHHTTCSC-------CCHHHHHH--HHHTTCSSCSSSEE
T ss_pred             eHHHHHHHHHhhhcccCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhhCC-------CCHHHHHH--HHHHhCCCCCCcEe
Confidence            99999976643          2234556777777777666543322211       11122222  34578899999886

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A

Probab=98.94  E-value=2.2e-09  Score=90.59  Aligned_cols=64  Identities=27%  Similarity=0.482  Sum_probs=60.1

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHH-hccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQ-LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ...++.+|+.+|.|++ |+|+.+||+.+|.. +|     ..+++++++.++..+|.|++|.|+|+||+..|
T Consensus        87 ~~~~~~~F~~~D~d~~-G~i~~~el~~~l~~~~~-----~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~  151 (153)
T 3ox6_A           87 VKELRDAFREFDTNGD-GEISTSELREAMRALLG-----HQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM  151 (153)
T ss_dssp             HHHHHHHHHHHCTTCS-SSBCHHHHHHHHHHHHS-----SCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHT
T ss_pred             HHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHHhc-----CCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHH
Confidence            4678999999999999 99999999999999 89     88999999999999999999999999999654

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A

Probab=98.94  E-value=2.2e-09  Score=93.44  Aligned_cols=67  Identities=31%  Similarity=0.542  Sum_probs=60.1

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ....++.+|+.+|+|++ |+|+.+||+.+|..+|     ..+++++++.++..+|.|+||.|+|+||+..+..
T Consensus        82 ~~~~~~~~F~~~D~d~~-G~I~~~E~~~~l~~~g-----~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  148 (179)
T 2f2o_A           82 SEEEIREAFRVFDKDGN-GYISAAELRHVMTNLG-----EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA  148 (179)
T ss_dssp             HHHHHHHHHHHHCTTCS-SEECHHHHHHHHHHC-------CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHSCC
T ss_pred             cHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence            44678899999999999 9999999999999999     8899999999999999999999999999976643

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*

Probab=98.94  E-value=2.2e-09  Score=90.25  Aligned_cols=65  Identities=17%  Similarity=0.331  Sum_probs=60.5

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ....++.+|+.+|+|++ |+|+.+||+.+|..+|     ..+++++++.++.. |.|++|.|+|+||+..|.
T Consensus        83 ~~~~~~~~F~~~D~d~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~~~~~-d~~~dg~i~~~eF~~~~~  147 (149)
T 2mys_C           83 TFEDFVEGLRVFDKEGN-GTVMGAELRHVLATLG-----EKMTEEEVEELMKG-QEDSNGCINYEAFVKHIM  147 (149)
T ss_pred             hHHHHHHHHHHhCCCCC-ceEcHHHHHHHHHHhC-----CCCCHHHHHHHHhh-CCCCCCcEeHHHHHHHHh
Confidence            45678899999999999 9999999999999999     88999999999999 999999999999997664

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}

Probab=98.94  E-value=2.2e-10  Score=95.96  Aligned_cols=115  Identities=11%  Similarity=0.143  Sum_probs=88.1

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhcc------
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT------  375 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~------  375 (447)
                      ....++++|..+|+|++ |+|+.+||+.+|+.+|     ..++.+++..++..    ++|.|+|+||+..+...      
T Consensus         5 ~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~~~~~----~~g~i~~~eF~~~~~~~~~~~~~   74 (143)
T 3j04_B            5 QIQEFKEAFNMIDQNRD-GFIDKEDLHDMLASMG-----KNPTDEYLEGMMSE----APGPINFTMFLTMFGEKLNGTDP   74 (143)
T ss_dssp             HHHHHHHHHTTTCSSCT-TCCCHHHHHHHHHHTS-----CCCCHHHHHTTTTT----SSSCCCHHHHHHHHHHTTTSSCC
T ss_pred             HHHHHHHHHHHhCCCCC-CCcCHHHHHHHHHHhC-----CCCCHHHHHHHHHh----CCCCcCHHHHHHHHHHHhccCCc
Confidence            45678999999999999 9999999999999999     88999999988876    78999999999776432      


Q ss_pred             -----CcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          376 -----TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       376 -----~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                           ..+...|.+..|.+...|.......+|..++...     +..  ....+|.+.+|.|+
T Consensus        75 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~-----~~~--~~~~~D~d~dg~i~  130 (143)
T 3j04_B           75 EDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEE-----VDE--MYREAPIDKKGNFN  130 (143)
T ss_dssp             HHHHHHHHTTSCSSSCCCCCTTTHHHHHHTSSSCCCHHH-----HHH--HHHHTTCCSSSCCC
T ss_pred             HHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCCCHHH-----HHH--HHHHcCCCCCCcCc
Confidence                 2235667777788887777666666665433322     222  34567888888875

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5

Probab=98.94  E-value=1.7e-10  Score=100.23  Aligned_cols=117  Identities=13%  Similarity=0.104  Sum_probs=84.4

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHH----HHHHhccCCCCCCCCHHHHH-----------HHHHHcCCCCCceeehH
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCE----ALEQLNLTGHKHGLADEETK-----------DLWVQADIDGNGVVDYK  366 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~----~l~~~g~~~~~~~~~~~~~~-----------~~~~~~D~~~~g~i~~~  366 (447)
                      ....++++|..+|.|++ |+|+.+||+.    +++.+|     ..++.+++.           .++..+|.|++|.|+|+
T Consensus         5 ~~~~l~~~F~~~D~d~~-G~i~~~el~~~~~~~l~~~g-----~~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~   78 (176)
T 1nya_A            5 ASDRLKKRFDRWDFDGN-GALERADFEKEAQHIAEAFG-----KDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEE   78 (176)
T ss_dssp             HHHHHHHHHHHCCSSCC-SSBCSHHHHHHHHHHHHHTS-----SCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHH
T ss_pred             HHHHHHHHHHHHcCCCC-CcccHHHHHHHHHHHHHHcC-----CCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHH
Confidence            45678999999999999 9999999999    688889     778888887           88999999999999999


Q ss_pred             HHHHHHhcc------------------CcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCC
Q 013259          367 EFQQRIWKT------------------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSD  428 (447)
Q Consensus       367 EF~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  428 (447)
                      ||+..+...                  ..+...|.+..|.++..|........|  ++     ..++..  ....+|.+.
T Consensus        79 Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g--~~-----~~~~~~--~~~~~D~d~  149 (176)
T 1nya_A           79 QFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG--MS-----KAEAAE--AFNQVDTNG  149 (176)
T ss_dssp             HHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT--CC-----HHHHHH--HHHHHCTTC
T ss_pred             HHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhC--CC-----HHHHHH--HHHHhCCCC
Confidence            999766321                  113345666666666666554444444  11     112222  334577788


Q ss_pred             Cccee
Q 013259          429 HARLT  433 (447)
Q Consensus       429 ~~~l~  433 (447)
                      +|.|+
T Consensus       150 dg~i~  154 (176)
T 1nya_A          150 NGELS  154 (176)
T ss_dssp             SSEEE
T ss_pred             CCCCc
Confidence            88765

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...

Probab=98.94  E-value=2.9e-09  Score=90.89  Aligned_cols=66  Identities=20%  Similarity=0.407  Sum_probs=61.6

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ....++.+|+.+|.|++ |+|+.+||+.+|..+|     ..+++++++.++..+|.|++|.|+|+||+..+.
T Consensus        94 ~~~~~~~~F~~~D~d~~-G~I~~~e~~~~l~~~g-----~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  159 (162)
T 1top_A           94 SEEELANCFRIFDKNAD-GFIDIEELGEILRATG-----EHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMME  159 (162)
T ss_dssp             HHHHHHHHHHHHCTTCS-SCBCHHHHHHHHHTTT-----CCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             cHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence            45678999999999999 9999999999999999     889999999999999999999999999997663

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}

Probab=98.93  E-value=6.8e-10  Score=98.74  Aligned_cols=66  Identities=21%  Similarity=0.284  Sum_probs=61.2

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ....+..+|+.||.|++ |+|+.+||+.+| .+|     ..+++++++.+|..+|.|+||.|+|+||+..|..
T Consensus       124 ~~~~l~~~F~~~D~d~~-G~Is~~El~~~l-~~g-----~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~  189 (196)
T 3dtp_E          124 EEDVIVNAFNLFDEGDG-KCKEETLKRSLT-TWG-----EKFSQDEVDQALSEAPIDGNGLIDIKKFAQILTK  189 (196)
T ss_dssp             CHHHHHHHHHTTCSSSS-CCBHHHHHHHHH-HSS-----SCCCHHHHHHHHHSSCEETTEECHHHHHHHHHSS
T ss_pred             cHHHHHHHHHHHCCCCC-CcCcHHHHHHHH-HcC-----CCCCHHHHHHHHHHcCCCCCCEEeHHHHHHHHHc
Confidence            34678999999999999 999999999999 999     8899999999999999999999999999976644

>2xsw_A 72 kDa inositol polyphosphate 5-phosphatase; inositol signalling, SGC stockholm, structural genomics CONS hydrolase; 1.90A {Homo sapiens}

Probab=98.92  E-value=8.6e-10  Score=106.59  Aligned_cols=143  Identities=13%  Similarity=0.031  Sum_probs=76.6

Q ss_pred             hCCCcE--EEEcccccChhhHHHHHHHHhhhcCCcEEEecCCCCCCceEEEEEecCCceEeeeEEEEecCCCCchhhhhh
Q 013259           74 YERSSI--ICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLH  151 (447)
Q Consensus        74 ~~~~DI--I~LQEv~~~~~~~~~~l~~~l~~~gy~~~~~~~~~~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~~~~~  151 (447)
                      ...|||  |+|||+......+.+.+.+.|. ..|.....  ..-.+.+++||+|....+.+..........+ -.+....
T Consensus        55 ~~~pDI~viGlQEi~~~~~~W~~~l~~~L~-~~Y~~v~s--~~l~g~~l~Vfvr~~~~~~i~~v~~~~v~tG-~~g~~gN  130 (357)
T 2xsw_A           55 DYAQDLYVIGVQEGCSDRREWETRLQETLG-PHYVLLSS--AAHGVLYMSLFIRRDLIWFCSEVECSTVTTR-IVSQIKT  130 (357)
T ss_dssp             CSCCSEEEEEEESCCSCHHHHHHHHHHHHC-TTEEEEEE--EEETTEEEEEEEEGGGGGGBBCCEEEEEEEE-EEETTEE
T ss_pred             cCCCCEEEEEeeeccchHHHHHHHHHHHhC-Ccccchhh--hhhhhEEEEEEEchHHhhcCceeEecccccc-ccccccc
Confidence            457996  8999997555556666666664 24443322  2234567889977664332221111111110 0000000


Q ss_pred             hcccccccccccCCCCCeEEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHHH------------cCCCCCcEEEeec
Q 013259          152 VELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKE------------HNLKPIPIILCGD  219 (447)
Q Consensus       152 l~~~~~~~~~~~~~~g~~l~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~~------------~~~~~~pvIl~GD  219 (447)
                      .    ..+..++...+..|+++|+||.+...  ....|..+...+++.+.--...            ......++|++||
T Consensus       131 K----Gav~vr~~~~~t~~~Fvn~HLaa~~~--~~~~Rn~d~~~I~~~l~f~~~~~~~~~~~~~~~~~~~~~d~vfw~GD  204 (357)
T 2xsw_A          131 K----GALGISFTFFGTSFLFITSHFTSGDG--KVAERLLDYTRTVQALVLPRNVPDTNPYRSSAADVTTRFDEVFWFGD  204 (357)
T ss_dssp             E----EEEEEEEEETTEEEEEEEEECCCSTT--CHHHHHHHHHHHHHHCCCCSSSCCSSGGGCBTTBGGGSSSEEEEEEE
T ss_pred             c----cEEEEEEEECCeEEEEEEEccCCCCc--hHHHHHHHHHHHHHHhcccccccccccccccccccccccceEEEecc
Confidence            0    00112333457889999999987542  3456888887776654210000            0002357999999


Q ss_pred             CCCccCC
Q 013259          220 WNGSKRG  226 (447)
Q Consensus       220 FN~~p~s  226 (447)
                      ||...+.
T Consensus       205 lNyRi~~  211 (357)
T 2xsw_A          205 FNFRLSG  211 (357)
T ss_dssp             CCCCBSS
T ss_pred             cCccccc
Confidence            9987654

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=98.91  E-value=4.4e-10  Score=114.72  Aligned_cols=135  Identities=14%  Similarity=0.123  Sum_probs=92.4

Q ss_pred             HHHHhHHHHHH--HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCC---CCCCCHHHHHHHHHHcCCCCCcee
Q 013259          289 EAVFGMFKCLL--RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGH---KHGLADEETKDLWVQADIDGNGVV  363 (447)
Q Consensus       289 ~~v~~~~~~~~--~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~---~~~~~~~~~~~~~~~~D~~~~g~i  363 (447)
                      .+++..+...+  ......++++|..+|.|++ |.|+.+||..+|..+|....   ....++++++.+|+.+|.|+||.|
T Consensus       329 qa~l~~ia~~~~~~~~~~~l~~~F~~~D~d~d-G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~G~I  407 (494)
T 3lij_A          329 QAALLYMASKLTSQEETKELTDIFRHIDKNGD-GQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYI  407 (494)
T ss_dssp             HHHHHHHHHHSCCHHHHHHHHHHHHHHCTTCS-SEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHCTTCSSSE
T ss_pred             HHHHHHHHHhcccHHHHHHHHHHHHHhCcCCC-CeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHhCCCCCCcC
Confidence            34444444443  4566789999999999999 99999999999999861000   024558899999999999999999


Q ss_pred             ehHHHHHHHhc----------cCcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          364 DYKEFQQRIWK----------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       364 ~~~EF~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                      +|+||+..+..          ...+...|.+..|.++.+|.......       ..+...++..  ....+|.+.||.|+
T Consensus       408 ~~~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~-------~~~~~~~~~~--~~~~~D~d~dG~I~  478 (494)
T 3lij_A          408 DYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGL-------DHLESKTWKE--MISGIDSNNDGDVD  478 (494)
T ss_dssp             EHHHHHHHHSCHHHHTCHHHHHHHHHHHCTTCSSEECHHHHHHHC-C-------CSCCCHHHHH--HHHTTCSSSSSSEE
T ss_pred             cHHHHHHHHHhhhccccHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh-------cCCCHHHHHH--HHHHhCCCCCCcCC
Confidence            99999977643          22345566677777766664332221       1112222332  44578899999886

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A

Probab=98.91  E-value=2.4e-09  Score=89.94  Aligned_cols=63  Identities=24%  Similarity=0.302  Sum_probs=58.8

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ....++.+|+.+|+|++ |+|+.+||+.+|..+|     ..+++++++.++..+  |+||.|+|+||+..|
T Consensus        82 ~~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~l  144 (146)
T 2qac_A           82 NVEELIKMFAHFDNNCT-GYLTKSQMKNILTTWG-----DALTDQEAIDALNAF--SSEDNIDYKLFCEDI  144 (146)
T ss_dssp             CHHHHHHHHHTTCTTCS-SEEEHHHHHHHHHHSS-----SCCCHHHHHHHHHHH--CSSSEEEHHHHHHHH
T ss_pred             hHHHHHHHHHHhCCCCC-CCCCHHHHHHHHHHhC-----CCCCHHHHHHHHHHc--CCCCcCcHHHHHHHH
Confidence            35678999999999999 9999999999999999     889999999999999  999999999999765

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=98.91  E-value=5.1e-10  Score=93.79  Aligned_cols=112  Identities=17%  Similarity=0.173  Sum_probs=85.5

Q ss_pred             HHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhccC---------
Q 013259          306 ETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTT---------  376 (447)
Q Consensus       306 l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~~---------  376 (447)
                      ++++|..+|.|++ |+|+.+||+.+|+.+|     ..++.+++..++..   +++|.|+|+||+..+....         
T Consensus         7 l~~~F~~~D~d~~-G~i~~~e~~~~l~~~~-----~~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~~~~~~~~~~~~~   77 (145)
T 2bl0_B            7 IQECFQIFDKDND-GKVSIEELGSALRSLG-----KNPTNAELNTIKGQ---LNAKEFDLATFKTVYRKPIKTPTEQSKE   77 (145)
T ss_dssp             HHHHHHHHCTTCS-SCEEGGGHHHHHHHTT-----CCCCHHHHHHHHHH---HTSSEECHHHHHHHHTSCCCCGGGGHHH
T ss_pred             HHHHHHHhCCCCc-CccCHHHHHHHHHHhC-----CCCCHHHHHHHHHh---cCCCeEcHHHHHHHHHHHhhcCcccHHH
Confidence            8999999999999 9999999999999999     88999999999988   8899999999997664432         


Q ss_pred             ---cccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          377 ---WSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       377 ---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                         .+...|.+..|.+...|........|..++..     ++..  ....+|.+.+|.|+
T Consensus        78 l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~-----~~~~--~~~~~d~~~dg~i~  130 (145)
T 2bl0_B           78 MLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSS-----EVEE--LMKEVSVSGDGAIN  130 (145)
T ss_dssp             HHHHHHHHCSSSSSEEEHHHHHHHHHHSSSCCCHH-----HHHH--HHTTCCCCTTSEEE
T ss_pred             HHHHHHHhCCCCCCeEcHHHHHHHHHHcCCCCCHH-----HHHH--HHHHcCCCCCCcEe
Confidence               22455667777777777665555555433322     2222  34578888899875

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A

Probab=98.91  E-value=1.4e-10  Score=92.51  Aligned_cols=66  Identities=27%  Similarity=0.425  Sum_probs=61.0

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh---ccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQL---NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~---g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .....++.+|+.+|+|++ |+|+.+||+.+|..+   |     ..+++++++.++..+|.|++|.|+|+||+..+
T Consensus        38 ~~~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~~~~~g-----~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~  106 (108)
T 2kyc_A           38 KSSSQLKEIFRILDNDQS-GFIEEDELKYFLQRFESGA-----RVLTASETKTFLAAADHDGDGKIGAEEFQEMV  106 (108)
T ss_dssp             CCSSSHHHHCSSSCSCCS-SCCCGGGTTTSHHHHSSSC-----CCCCTTTTHHHHTTTCCSSSSCCCSSHHHHHH
T ss_pred             ccHHHHHHHHHHhCCCCC-CeEcHHHHHHHHHHHhhcc-----CCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHH
Confidence            456789999999999999 999999999999998   6     77899999999999999999999999999655

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A

Probab=98.90  E-value=2.5e-09  Score=94.07  Aligned_cols=60  Identities=18%  Similarity=0.276  Sum_probs=57.5

Q ss_pred             HHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       308 ~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      .+|+.+|+|++ |+|+.+||+.+|..+|     ..+++++++.++..+|.|+||.|+|+||+..+.
T Consensus       113 ~~F~~~D~d~~-G~Is~~El~~~l~~~g-----~~~~~~~~~~~~~~~D~d~dG~i~~~eF~~~~~  172 (191)
T 1uhk_A          113 ALFDIVDKDQN-GAITLDEWKAYTKAAG-----IIQSSEDCEETFRVCDIDESGQLDVDEMTRQHL  172 (191)
T ss_dssp             HHHHHHCTTCS-SEECHHHHHHHHHHHT-----SCCSHHHHHHHHHHSCCCTTSCEEHHHHHHHHH
T ss_pred             HHHHHhcCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            89999999999 9999999999999999     889999999999999999999999999997764

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*

Probab=98.90  E-value=2.2e-09  Score=94.79  Aligned_cols=61  Identities=16%  Similarity=0.243  Sum_probs=54.0

Q ss_pred             HHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       308 ~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      .+|+.+|+|++ |+|+.+||+.+|..+|     ..+++++++.++..+|.|+||.|+|+||+..+..
T Consensus       117 ~~F~~~D~d~~-G~I~~~El~~~l~~~g-----~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  177 (195)
T 1qv0_A          117 AVFDIFDKDGS-GTITLDEWKAYGKISG-----ISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHLG  177 (195)
T ss_dssp             HHHHHTC-----CEECHHHHHHHHHHHS-----SCCCHHHHHHHHHHSCCCTTSCEEHHHHHHHHHH
T ss_pred             HHHHHhcCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence            89999999999 9999999999999999     8899999999999999999999999999977743

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5

Probab=98.90  E-value=1.7e-09  Score=90.08  Aligned_cols=63  Identities=24%  Similarity=0.371  Sum_probs=59.6

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ..++.+|+.+|+|++ |+|+.+||+.+|..+|     ..+++++++.++..+|. ++|.|+|+||+..|.
T Consensus        76 ~~~~~~F~~~D~d~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~~~~~~d~-~dg~i~~~eF~~~~~  138 (140)
T 1ggw_A           76 EEFVKGFQVFDKDAT-GMIGVGELRYVLTSLG-----EKLSNEEMDELLKGVPV-KDGMVNYHDFVQMIL  138 (140)
T ss_dssp             HHHHHHHHTTCSSCS-SCCCHHHHHHHHHHHH-----SCSCHHHHHHHHHHTTC-SSCCSTTTHHHHHHH
T ss_pred             HHHHHHHHHhCCCCC-CcEeHHHHHHHHHHcC-----CCCCHHHHHHHHHhccC-CCCcEeHHHHHHHHh
Confidence            678899999999999 9999999999999999     88999999999999999 999999999997664

>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}

Probab=98.89  E-value=1.5e-09  Score=94.69  Aligned_cols=62  Identities=13%  Similarity=0.126  Sum_probs=58.1

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHh----ccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQL----NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~----g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ..++++|+.|| |++ |+|+.+||+.+|+.+    |     ..+++++++.++..+| |+||.|+|+||+..+.
T Consensus        76 ~~l~~aF~~fD-d~~-G~I~~~El~~~l~~l~~~~G-----~~~~~~~~~~l~~~~d-d~dG~I~~~EF~~~~~  141 (174)
T 2i7a_A           76 VHYQHVFQKVQ-TSP-GVLLSSDLWKAIENTDFLRG-----IFISRELLHLVTLRYS-DSVGRVSFPSLVCFLM  141 (174)
T ss_dssp             HHHHHHHHHHC-SBT-TBEEGGGHHHHHHTCGGGTT-----CCCCHHHHHHHHHHHS-CTTSEECHHHHHHHHH
T ss_pred             HHHHHHHHHhc-CCC-CcCCHHHHHHHHHHhHhccC-----CCCCHHHHHHHHHHHc-CCCCeEcHHHHHHHHH
Confidence            46889999999 999 999999999999999    8     8899999999999999 9999999999997664

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A

Probab=98.88  E-value=3.7e-10  Score=96.87  Aligned_cols=116  Identities=15%  Similarity=0.105  Sum_probs=82.7

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHH----HHhccCCCCCCCCHHHHHHH-----------HHHcCCCCCceeehHH
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEAL----EQLNLTGHKHGLADEETKDL-----------WVQADIDGNGVVDYKE  367 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l----~~~g~~~~~~~~~~~~~~~~-----------~~~~D~~~~g~i~~~E  367 (447)
                      ...++++|..+|.|++ |+|+.+||+.+|    +.+|     ..++.++++.+           +..+|.|++|.|+|+|
T Consensus         3 ~~~l~~~F~~~D~d~d-G~i~~~E~~~~l~~~~~~~g-----~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~e   76 (166)
T 3akb_A            3 ERRIAARFTTFDQDGN-GHIDRSDFSGAAKAMLAEFG-----VAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREE   76 (166)
T ss_dssp             HHHHHHHHHHHCTTCS-SEECHHHHHHHHHHHHHHHT-----CCTTSHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHH
T ss_pred             HHHHHHHHhHHcCCCC-CCcCHHHHHHHHHHHHHHcC-----CCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHH
Confidence            4578999999999999 999999999975    4558     77888888755           6999999999999999


Q ss_pred             HHHHHhc-----------------cCcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCc
Q 013259          368 FQQRIWK-----------------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHA  430 (447)
Q Consensus       368 F~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  430 (447)
                      |+..+..                 ...+...|.+..|.+...|........|  ++     ..++..  ....+|.+.+|
T Consensus        77 f~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~--~~-----~~~~~~--~~~~~D~d~dg  147 (166)
T 3akb_A           77 FVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG--VP-----EDLARQ--AAAALDTDGDG  147 (166)
T ss_dssp             HHHTHHHHHHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHTT--CC-----HHHHHH--HHHHHCTTCSS
T ss_pred             HHHHHHHHhccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC--CC-----HHHHHH--HHHHhCCCCCC
Confidence            9965532                 1223455666777777766655444444  11     111222  23457778888


Q ss_pred             cee
Q 013259          431 RLT  433 (447)
Q Consensus       431 ~l~  433 (447)
                      .|+
T Consensus       148 ~i~  150 (166)
T 3akb_A          148 KVG  150 (166)
T ss_dssp             BCC
T ss_pred             cCc
Confidence            875

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}

Probab=98.86  E-value=1.4e-09  Score=96.75  Aligned_cols=68  Identities=21%  Similarity=0.334  Sum_probs=59.5

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh--ccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQL--NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~--g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      .....++.+|+.+|.|++ |+|+.+||+.+|..+  |     ..+++++++.+|..+|.|+||.|+|+||+.+|..
T Consensus       126 ~~~~~l~~~F~~~D~d~~-G~Is~~El~~~l~~~~~~-----~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~  195 (197)
T 3pm8_A          126 LKKEVCLIPFKFFDIDGN-GKISVEELKRIFGRDDIE-----NPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMSK  195 (197)
T ss_dssp             CSHHHHHHHHHHHCTTCS-SEECHHHHHHHHC----C-----CHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHC
T ss_pred             hhHHHHHHHHHHHCCCCC-CCCCHHHHHHHHHhcccC-----CCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHc
Confidence            345688999999999999 999999999999988  5     6688999999999999999999999999976643

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A

Probab=98.86  E-value=8.5e-10  Score=98.15  Aligned_cols=102  Identities=16%  Similarity=0.089  Sum_probs=80.5

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc----cC
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TT  376 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~----~~  376 (447)
                      .+...+++ |..+|+|++ |+|+.+||+.+|+.+|+.+....+++++++.+++.+|.|++|.|+|+||+..+..    ..
T Consensus        30 ~~~~~l~~-F~~~D~d~~-G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~eF~~~~~~~~~~~~  107 (198)
T 1juo_A           30 QTQDPLYG-YFAAVAGQD-GQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQ  107 (198)
T ss_dssp             CCCCTTHH-HHHHHHTTT-TEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHH
T ss_pred             cccHHHHH-HHHHhCCCC-CcCCHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHHH
Confidence            35678888 999999999 9999999999999998321222689999999999999999999999999976532    33


Q ss_pred             cccccccCCCcccccccccccccccceE
Q 013259          377 WSDQRNDLNDEDEDGFVKSSLEQTIGFS  404 (447)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~  404 (447)
                      .+...|.+..|.++..|.......+|..
T Consensus       108 ~F~~~D~d~~G~I~~~el~~~l~~~g~~  135 (198)
T 1juo_A          108 HFISFDTDRSGTVDPQELQKALTTMGFR  135 (198)
T ss_dssp             HHHTTCTTCCSEECHHHHHHHHHHTTCC
T ss_pred             HHHHhCCCCCCcCCHHHHHHHHHHhCCC
Confidence            4566777888888777765555555543

>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B

Probab=98.86  E-value=1.3e-09  Score=92.88  Aligned_cols=116  Identities=12%  Similarity=0.162  Sum_probs=88.0

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc-----
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK-----  374 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~-----  374 (447)
                      ..+..+++++|..||+|++ |+|+.+||+.+|+.+|     ..++++++..++..    ++|.|+|+||+..+..     
T Consensus        12 ~~qi~elk~~F~~~D~d~d-G~I~~~El~~~l~~lg-----~~~~~~~~~~~~~~----~~~~i~f~ef~~~~~~~~~~~   81 (153)
T 3i5g_B           12 QRQMQELKEAFTMIDQDRD-GFIGMEDLKDMFSSLG-----RVPPDDELNAMLKE----CPGQLNFTAFLTLFGEKVSGT   81 (153)
T ss_dssp             HHHHHHHHHHHHHHCCSTT-SCCCHHHHHHHHHHTT-----SCCCHHHHHHHHHT----SSSCCCSHHHHHTTTTTTTTC
T ss_pred             HHHHHHHHHHHHHHCCCCC-CeEcHHHHHHHHHHcC-----CCccHHHHHHHHHh----ccCCccHHHHHHHHHhhhccc
Confidence            4567789999999999999 9999999999999999     88999999888764    4678999999966633     


Q ss_pred             ------cCcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          375 ------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       375 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                            ...+...|.+..|.|...|.......+|.+++..-     +..  ....+|.+ +|.++
T Consensus        82 ~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~e-----i~~--~~~~~D~~-dG~I~  138 (153)
T 3i5g_B           82 DPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEE-----IKN--VWKDAPLK-NKQFN  138 (153)
T ss_dssp             CCHHHHHHHHHTTCSSCSSCCCHHHHHHHHHSSSSCCCHHH-----HHH--HHTTCCEE-TTEEC
T ss_pred             ccHHHHHHHHhccccCCCCeEeHHHHHHHHHHcCCcCCHHH-----HHH--HHHHhCCC-cCEEc
Confidence                  22345667788888888887776777776555443     222  23456666 78654

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A

Probab=98.85  E-value=3.1e-09  Score=95.22  Aligned_cols=67  Identities=25%  Similarity=0.380  Sum_probs=60.7

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh-ccCCCCCCCCHHHHHHH----HHHcCCCCCceeehHHHHHHHhc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL-NLTGHKHGLADEETKDL----WVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~-g~~~~~~~~~~~~~~~~----~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ....++.+|+.+|+|++ |+|+.+||+.+|..+ |     ..+++++++.+    |..+|.|+||.|+|+||+..+..
T Consensus       111 ~~~~l~~~F~~~D~d~d-G~Is~~El~~~l~~~~g-----~~~s~~~~~~l~~~~~~~~D~d~dG~Is~~EF~~~~~~  182 (208)
T 2ct9_A          111 RSNKLHFAFRLYDLDKD-DKISRDELLQVLRMMVG-----VNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLEK  182 (208)
T ss_dssp             HHHHHHHHHHHHCTTCS-SEECHHHHHHHHHHHSC-----TTCCHHHHHHHHHHHHHHHCSSSSSSEEHHHHHHTTTT
T ss_pred             HHHHHHHHHHHHCCCCC-CEEcHHHHHHHHHHHhC-----CCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence            45678899999999999 999999999999997 8     88999999888    99999999999999999966533

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=98.85  E-value=1.1e-09  Score=111.50  Aligned_cols=132  Identities=11%  Similarity=0.104  Sum_probs=89.9

Q ss_pred             hhHHHHhHHHHHH--HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHH----HhccCCCCCCCC-------HHHHHHHHH
Q 013259          287 WSEAVFGMFKCLL--RRASLTETDAFAFLKADNDGDYITYSGFCEALE----QLNLTGHKHGLA-------DEETKDLWV  353 (447)
Q Consensus       287 w~~~v~~~~~~~~--~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~----~~g~~~~~~~~~-------~~~~~~~~~  353 (447)
                      +..+++..+...+  ......++++|..+|+|++ |.|+.+||..++.    .+|     ..++       +++++.+|+
T Consensus       316 l~qa~l~~i~~~~~~~~~~~~l~~~F~~~D~d~d-G~I~~~El~~~l~~~~~~~g-----~~~~~~~~~~~~~~~~~~~~  389 (484)
T 3nyv_A          316 LAQAALLYMGSKLTSQDETKELTAIFHKMDKNGD-GQLDRAELIEGYKELMRMKG-----QDASMLDASAVEHEVDQVLD  389 (484)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCS-SEEEHHHHHHHHHHHHC---------CGGGCSHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhccCcHHHHHHHHHHHHHhCcCCC-ceEeHHHHHHHHHHHhhhcc-----cccccccccccHHHHHHHHH
Confidence            3344555554444  5677899999999999999 9999999955554    456     5566       889999999


Q ss_pred             HcCCCCCceeehHHHHHHHhc----------cCcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCC
Q 013259          354 QADIDGNGVVDYKEFQQRIWK----------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPEN  423 (447)
Q Consensus       354 ~~D~~~~g~i~~~EF~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  423 (447)
                      .+|.|+||.|+|+||+..+..          ...+...|.+..|.++.+|........       .+...++.+  ....
T Consensus       390 ~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~-------~~~~~~~~~--~~~~  460 (484)
T 3nyv_A          390 AVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVS-------DVDSETWKS--VLSE  460 (484)
T ss_dssp             HHTCCTTSEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHT-------TCCHHHHHH--HHHH
T ss_pred             HhCCCCCCeEeHHHHHHHHHhccccCcHHHHHHHHHHHCCCCCCcCCHHHHHHHHHhc-------CCCHHHHHH--HHHH
Confidence            999999999999999976643          234456677777777777654332221       111112222  3456


Q ss_pred             CCCCCCccee
Q 013259          424 YSLSDHARLT  433 (447)
Q Consensus       424 ~~~~~~~~l~  433 (447)
                      +|.+.||.|+
T Consensus       461 ~D~d~dG~i~  470 (484)
T 3nyv_A          461 VDKNNDGEVD  470 (484)
T ss_dssp             HCTTCCSEEE
T ss_pred             hcCCCCCcCC
Confidence            7889999886

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...

Probab=98.85  E-value=2e-09  Score=91.93  Aligned_cols=66  Identities=20%  Similarity=0.407  Sum_probs=59.4

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ....++.+|+.+|+|++ |+|+.+||+.+|..+|     ..+++++++.++..+|.|+||.|+|+||+..|.
T Consensus        93 ~~~~~~~~F~~~D~d~~-G~i~~~El~~~l~~~g-----~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~  158 (161)
T 1dtl_A           93 SEEELSDLFRMFDKNAD-GYIDLEELKIMLQATG-----ETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK  158 (161)
T ss_dssp             HHHHHHHHHHHHCTTCS-SEEEHHHHGGGGTTC-------CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence            44568999999999999 9999999999999998     889999999999999999999999999997663

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8

Probab=98.85  E-value=1.5e-09  Score=93.71  Aligned_cols=96  Identities=17%  Similarity=0.106  Sum_probs=75.4

Q ss_pred             HHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc----cCccccccc
Q 013259          308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTWSDQRND  383 (447)
Q Consensus       308 ~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~----~~~~~~~~~  383 (447)
                      +.|..+|+|++ |+|+.+||+.+|..+|+.+....++.++++.++..+|.|++|.|+|+||+..+..    ...+...|.
T Consensus         5 ~~F~~~D~d~~-G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~F~~~D~   83 (167)
T 1gjy_A            5 YGYFASVAGQD-GQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDS   83 (167)
T ss_dssp             HHHHHHHCCTT-SCBCHHHHHHHHHHHTCSTTSCCCCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             HHHHHHHcCCC-CcCCHHHHHHHHHhhcccCCCCCcCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            36999999999 9999999999999998321122689999999999999999999999999976532    334566677


Q ss_pred             CCCcccccccccccccccceE
Q 013259          384 LNDEDEDGFVKSSLEQTIGFS  404 (447)
Q Consensus       384 ~~~~~~~~~~~~~~~~~~g~~  404 (447)
                      +..|.++..|........|..
T Consensus        84 d~~G~i~~~el~~~l~~~g~~  104 (167)
T 1gjy_A           84 DRSGTVDPQELQKALTTMGFR  104 (167)
T ss_dssp             TCCSEECHHHHHHHHHTTTCC
T ss_pred             CCCCcCCHHHHHHHHHHcCCC
Confidence            778888777765555555543

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A

Probab=98.84  E-value=4.2e-09  Score=95.46  Aligned_cols=63  Identities=13%  Similarity=0.028  Sum_probs=57.8

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ..++.+|+.+|+|++ |+|+.+||+.+|..+|     ..+++++++.+++.+| |+||.|+|+||++.+.
T Consensus       117 ~~l~~~F~~~D~d~~-G~I~~~El~~~l~~~g-----~~~~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~  179 (220)
T 3sjs_A          117 ELAYNLFVMNARARS-GTLEPHEILPALQQLG-----FYINQRTSLLLHRLFA-RGMAFCDLNCWIAICA  179 (220)
T ss_dssp             HHHHHHHHHHCCSST-TEECHHHHHHHHHHHT-----CCCCHHHHHHHHHHHC---CCSEEHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCC-CCCcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHH
Confidence            568899999999999 9999999999999999     8899999999999999 9999999999998774

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}

Probab=98.84  E-value=3.6e-09  Score=94.27  Aligned_cols=67  Identities=24%  Similarity=0.360  Sum_probs=60.9

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh-ccCCCCCCCCHHHHHHHHHH----cCCCCCceeehHHHHHHHhc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL-NLTGHKHGLADEETKDLWVQ----ADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~-g~~~~~~~~~~~~~~~~~~~----~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ....++.+|+.+|.|++ |+|+.+||+.+|..+ |     ..+++++++.++..    +|.|+||.|+|+||+..+..
T Consensus       112 ~~~~l~~~F~~~D~d~d-G~Is~~El~~~l~~~~g-----~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~  183 (202)
T 2bec_A          112 RRNKLHYAFQLYDLDRD-GKISRHEMLQVLRLMVG-----VQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEK  183 (202)
T ss_dssp             HHHHHHHHHHHHCTTCS-SEECHHHHHHHHHHSCC-----SCCCHHHHHHHHHHHHHHHCSSCSSSEEHHHHHHTTTT
T ss_pred             HHHHHHHHHHHhCCCCC-CeEcHHHHHHHHHHhcC-----CCCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence            34578889999999999 999999999999999 9     88999999999998    99999999999999976643

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A

Probab=98.84  E-value=8.9e-09  Score=88.13  Aligned_cols=63  Identities=19%  Similarity=0.231  Sum_probs=58.2

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ...++.+|+.+|+|++ |+|+.+||+.++..+|       +++++++.++..+|.|+||.|+|+||+..+.
T Consensus        97 ~~~~~~~F~~~D~d~~-G~i~~~E~~~~l~~~~-------~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~  159 (166)
T 3akb_A           97 RPFLHAALGVADTDGD-GAVTVADTARALTAFG-------VPEDLARQAAAALDTDGDGKVGETEIVPAFA  159 (166)
T ss_dssp             HHHHHHHHHHHCSSSS-SCCBHHHHHHHHHHTT-------CCHHHHHHHHHHHCTTCSSBCCHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCC-CcCCHHHHHHHHHHhC-------CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            3458999999999999 9999999999999987       8899999999999999999999999997663

>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}

Probab=98.83  E-value=2.7e-09  Score=96.56  Aligned_cols=66  Identities=23%  Similarity=0.316  Sum_probs=60.7

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCC-CCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKH-GLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~-~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ...++.+|+.||.|++ |+|+.+||+.+|..+|     . .+++++++.+|..+|.|+||.|+|+||+..|..
T Consensus       129 ~~~l~~~F~~~D~d~~-G~Is~~El~~~l~~~g-----~~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~~  195 (219)
T 3cs1_A          129 FFELTVMFDEIDASGN-MLVDEEEFKRAVPKLE-----AWGAKVEDPAALFKELDKNGTGSVTFDEFAAWASA  195 (219)
T ss_dssp             HHHHHHHHHTTCSSSS-SEEEHHHHHHHHHHHH-----HHTCCCSCHHHHHHHHCTTSSSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHhc-----ccCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            4578999999999999 9999999999999988     6 688889999999999999999999999977754

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8

Probab=98.83  E-value=5e-09  Score=92.63  Aligned_cols=64  Identities=13%  Similarity=0.184  Sum_probs=60.4

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ..++.+|+.+|.|++ |+|+.+||+.+|..+|     ..+++++++.++..+|.|+||.|+|+||+..+.
T Consensus        93 ~~~~~~F~~~D~d~~-G~i~~~e~~~~l~~~g-----~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~  156 (191)
T 1y1x_A           93 LSMREGFRKRDSSGD-GRLDSNEVRAALLSSG-----YQVSEQTFQALMRKFDRQRRGSLGFDDYVELSI  156 (191)
T ss_dssp             HHHHHHHHHHCTTSS-SCBCHHHHHHHHHTTS-----CCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCC-CeEcHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence            578899999999999 9999999999999999     889999999999999999999999999997764

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A

Probab=98.83  E-value=5.3e-09  Score=90.46  Aligned_cols=64  Identities=14%  Similarity=0.148  Sum_probs=59.0

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ...++.+|+.+|+|++ |+|+.+||+.+|..+|       +++++++.++..+|.|+||.|+|+||+..|..
T Consensus        93 ~~~~~~~F~~~D~d~~-G~i~~~e~~~~l~~~g-------~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~  156 (174)
T 1q80_A           93 EGPLPLFFRAVDTNED-NNISRDEYGIFFGMLG-------LDKTMAPASFDAIDTNNDGLLSLEEFVIAGSD  156 (174)
T ss_dssp             HTHHHHHHHHHCTTSS-SSBCHHHHHHHHHHHT-------CCGGGHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCC-CcccHHHHHHHHHHcC-------CCHHHHHHHHHHhCCCCCceEeHHHHHHHHHH
Confidence            4678999999999999 9999999999999988       78889999999999999999999999977643

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A

Probab=98.83  E-value=6.5e-09  Score=89.99  Aligned_cols=64  Identities=22%  Similarity=0.267  Sum_probs=60.3

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ..++.+|+.+|+|++ |+|+.+||+.+|..+|     ..+++++++.++..+|.|+||.|+|+||+..+.
T Consensus        74 ~~~~~~F~~~D~d~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  137 (172)
T 2znd_A           74 TDWQNVFRTYDRDNS-GMIDKNELKQALSGFG-----YRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCI  137 (172)
T ss_dssp             HHHHHHHHHHCTTCS-SEECHHHHHHHHHHTT-----CCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCC-CccCHHHHHHHHHHcC-----CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            568899999999999 9999999999999999     889999999999999999999999999997664

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A

Probab=98.82  E-value=1.1e-09  Score=94.15  Aligned_cols=96  Identities=11%  Similarity=0.083  Sum_probs=75.5

Q ss_pred             HHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc----cCccccccc
Q 013259          308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTWSDQRND  383 (447)
Q Consensus       308 ~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~----~~~~~~~~~  383 (447)
                      ..|..+|+|++ |+|+.+||+.+|+.+|+.+....+++++++.+++.+|.|++|.|+|+||+..+..    ...+...|.
T Consensus         3 ~~F~~~D~d~~-G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~F~~~D~   81 (165)
T 1k94_A            3 YTYFSAVAGQD-GEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAALNAWKENFMTVDQ   81 (165)
T ss_dssp             HHHHHHHHGGG-TSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             HHHHHHhCCCC-CcCCHHHHHHHHHHhccccCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            46999999999 9999999999999998321122689999999999999999999999999976532    344566677


Q ss_pred             CCCcccccccccccccccceE
Q 013259          384 LNDEDEDGFVKSSLEQTIGFS  404 (447)
Q Consensus       384 ~~~~~~~~~~~~~~~~~~g~~  404 (447)
                      +..|.++..|.......+|..
T Consensus        82 d~~G~i~~~el~~~l~~~g~~  102 (165)
T 1k94_A           82 DGSGTVEHHELRQAIGLMGYR  102 (165)
T ss_dssp             TCCSBCCHHHHHHHHHHTTCC
T ss_pred             CCCceECHHHHHHHHHHhCCC
Confidence            778888777765555555543

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5

Probab=98.82  E-value=1.6e-09  Score=94.70  Aligned_cols=122  Identities=16%  Similarity=0.130  Sum_probs=82.2

Q ss_pred             hhhhHHHHhhhh-cCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHH-----------HHHcCCCCCceeehHHHH
Q 013259          302 ASLTETDAFAFL-KADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDL-----------WVQADIDGNGVVDYKEFQ  369 (447)
Q Consensus       302 ~~~~l~~~F~~~-D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~-----------~~~~D~~~~g~i~~~EF~  369 (447)
                      ....++.+|..+ |.|++ |+|+.+||..+|..++-. ....++.++++.+           ++.+|.|+||.|+|+||+
T Consensus         6 ~~~~l~~~F~~~~D~d~d-G~i~~~E~~~~l~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~   83 (185)
T 2sas_A            6 QKQKIKFTFDFFLDMNHD-GSIQDNDFEDMMTRYKEV-NKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYL   83 (185)
T ss_dssp             HHHHHHHHHHHHTCTTCS-SEECHHHHHHHHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHH
T ss_pred             HHHHHHHHHHHheeCCCC-CeEcHHHHHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHHHH
Confidence            356789999999 99999 999999999999876500 0024788888765           999999999999999999


Q ss_pred             HHHhcc-------------------CcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCc
Q 013259          370 QRIWKT-------------------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHA  430 (447)
Q Consensus       370 ~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  430 (447)
                      ..+...                   ..+...|.+..|.+...|........|+       ...++..  ....+|.+.+|
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g~-------~~~~~~~--~~~~~D~d~dG  154 (185)
T 2sas_A           84 AMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQL-------QCADVPA--VYNVITDGGKV  154 (185)
T ss_dssp             HHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCC-------CCSSHHH--HHHHHHTTTTS
T ss_pred             HHHHHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhCC-------CHHHHHH--HHHHhcCCCCC
Confidence            766321                   1223445566666666665444444441       1222222  23456778888


Q ss_pred             ceeE
Q 013259          431 RLTV  434 (447)
Q Consensus       431 ~l~~  434 (447)
                      .|+.
T Consensus       155 ~i~~  158 (185)
T 2sas_A          155 TFDL  158 (185)
T ss_dssp             CCSH
T ss_pred             cCcH
Confidence            8753

>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C

Probab=98.81  E-value=2.2e-09  Score=90.41  Aligned_cols=69  Identities=14%  Similarity=0.302  Sum_probs=51.8

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccC---CCCCCCCHHHHHHHH----HHcCCCCCceeehHHHHHHH
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLT---GHKHGLADEETKDLW----VQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~---~~~~~~~~~~~~~~~----~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ...++.+|+.||+|++ |+|+.+||+.+|..++-.   .....+++++++.++    +.+|.|+||+|+|+||+..|
T Consensus        67 ~~~l~~~F~~~D~d~d-G~I~~~El~~~l~~~~~~~~~~~g~~~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~  142 (143)
T 3a4u_B           67 QELQLHYFKMHDYDGN-NLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSL  142 (143)
T ss_dssp             HHHHHHHHHHTCTTCS-SCEEHHHHHHTCC-------------CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred             HHHHHHHHHHhCCCCC-CccCHHHHHHHHHHHHhhhccccCCCCCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence            3567889999999999 999999999999876300   000468888887666    99999999999999998543

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*

Probab=98.81  E-value=6e-09  Score=88.19  Aligned_cols=67  Identities=24%  Similarity=0.399  Sum_probs=61.0

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHH-hccCCCCCCCCHHHHHHHHHH----cCCCCCceeehHHHHHHHhc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQ-LNLTGHKHGLADEETKDLWVQ----ADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~~~~~~~----~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ....++.+|+.+|.|++ |+|+.+||+.+|.. +|     ..+++++++.++..    +|.|+||.|+|+||+..+..
T Consensus        73 ~~~~~~~~F~~~D~d~~-G~i~~~e~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  144 (155)
T 3ll8_B           73 KEQKLRFAFRIYDMDKD-GYISNGELFQVLKMMVG-----NNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGG  144 (155)
T ss_dssp             HHHHHHHHHHHHCTTCS-SCBCHHHHHHHHHHHHG-----GGSCHHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHHGG
T ss_pred             HHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHHhc-----cCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence            34678999999999999 99999999999999 58     78999999999999    99999999999999977644

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A

Probab=98.81  E-value=5.6e-09  Score=92.34  Aligned_cols=68  Identities=24%  Similarity=0.325  Sum_probs=57.8

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCH---HHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLAD---EETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~---~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .....++.+|+.+|.|++ |+|+.+||+.+|...+.   +..+++   ++++.+|..+|.|+||.|+|+||+.+|
T Consensus       119 ~~~~~l~~~F~~~D~d~~-G~Is~~El~~~l~~~~~---~~~l~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~  189 (191)
T 3k21_A          119 LSKKLIYCAFRVFDVDND-GEITTAELAHILYNGNK---KGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMM  189 (191)
T ss_dssp             CCHHHHHHHHHHHSTTCS-SCBCHHHHHHHHHHSSS---CSCCCHHHHHHHHHHHHHHCSSSSSSBCHHHHHHHH
T ss_pred             ccHHHHHHHHHHhCCCCC-CcCCHHHHHHHHHhcCC---CCCCCHhHHHHHHHHHHHhcCCCCCeECHHHHHHHH
Confidence            345678899999999999 99999999999988431   156776   468999999999999999999999765

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*

Probab=98.81  E-value=4.5e-09  Score=92.05  Aligned_cols=71  Identities=24%  Similarity=0.412  Sum_probs=59.0

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHH----HHHHcCCCCCceeehHHHHHHHhc
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKD----LWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~----~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ...++.+|+.||.|++ |+|+.+||+.+|..+|.......+++++++.    ++..+|.|+||.|+|+||+..+..
T Consensus        97 ~~~l~~~F~~~D~d~~-G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~  171 (183)
T 1dgu_A           97 DIKSHYAFRIFDFDDD-GTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR  171 (183)
T ss_dssp             HHHHHHHHHHHCTTCS-SEEEHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHCTTSSSEEEHHHHHHHHCS
T ss_pred             HHHHHHHHHHhCCCCC-CcCCHHHHHHHHHHHhcccccCCCCHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence            3578999999999999 9999999999999988100001578888886    999999999999999999976643

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B

Probab=98.80  E-value=2.6e-09  Score=91.86  Aligned_cols=117  Identities=12%  Similarity=0.116  Sum_probs=87.4

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCC-CCCHHHHHHHHHHcCCCCCceeehHHHHHHHhcc---
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKH-GLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT---  375 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~-~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~---  375 (447)
                      ......++.+|..+|.|++ |+|+.+||+.+|+.+|     . .++.+++..++...    +|.|+|+||+..+...   
T Consensus        21 ~~~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~~l~~~~----dg~i~~~eF~~~~~~~~~~   90 (166)
T 2mys_B           21 ETEIEDFKEAFTVIDQNAD-GIIDKDDLRETFAAMG-----RLNVKNEELDAMIKEA----SGPINFTVFLTMFGEKLKG   90 (166)
T ss_pred             HHHHHHHHHHHHHHCCCCC-CcCCHHHHHHHHHHhC-----CCCCCHHHHHHHHHHC----CCCcCHHHHHHHHHHHhcc
Confidence            3456789999999999999 9999999999999999     7 89999999999875    7999999999766431   


Q ss_pred             --------CcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          376 --------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       376 --------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                              ..+...|.+..|.+...|.......+|..++..     ++..  ....+|.+.+|.|+
T Consensus        91 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~-----~~~~--~~~~~D~d~dg~I~  149 (166)
T 2mys_B           91 ADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPE-----EIKN--MWAAFPPDVAGNVD  149 (166)
T ss_pred             CCcHHHHHHHHHHhCCCCCcceeHHHHHHHHHHcCCCCCHH-----HHHH--HHHhcCCCCCCeEe
Confidence                    223455677777777777655555555433222     2222  34567888899875

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5

Probab=98.80  E-value=1.6e-08  Score=87.51  Aligned_cols=62  Identities=19%  Similarity=0.313  Sum_probs=57.9

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ..++.+|+.+|.|++ |+|+.+||+.++..+|       +++++++.+|+.+|.|+||.|+|+||+..+.
T Consensus       102 ~~~~~~F~~~D~d~~-G~I~~~e~~~~l~~~g-------~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~  163 (176)
T 1nya_A          102 PVVKGIVGMCDKNAD-GQINADEFAAWLTALG-------MSKAEAAEAFNQVDTNGNGELSLDELLTAVR  163 (176)
T ss_dssp             HHHHHHHHHTCSSCC-SEEEHHHHHHHHHHTT-------CCHHHHHHHHHHHCTTCSSEEEHHHHHHHHS
T ss_pred             HHHHHHHHHhcCCCC-CCCCHHHHHHHHHHhC-------CCHHHHHHHHHHhCCCCCCCCcHHHHHHHHH
Confidence            568899999999999 9999999999999987       8899999999999999999999999997663

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A

Probab=98.78  E-value=3.3e-09  Score=92.03  Aligned_cols=100  Identities=14%  Similarity=0.132  Sum_probs=78.2

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh-ccCC--CCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc----c
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQL-NLTG--HKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----T  375 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~-g~~~--~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~----~  375 (447)
                      ...++++|..+| |++ |+|+.+||+.+|+.+ |...  .+..+++++++.++..+|.|++|.|+|+||+..+..    .
T Consensus         3 ~~~l~~~F~~~D-d~~-G~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~   80 (173)
T 1alv_A            3 VRQFRRLFAQLA-GDD-MEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQ   80 (173)
T ss_dssp             HHHHHHHHHHHH-GGG-TSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHh-CCC-CCcCHHHHHHHHHHhhhcccccccCCCCHHHHHHHHHHHcCCCCCccCHHHHHHHHHHHHHHH
Confidence            467899999999 999 999999999999987 5110  013578999999999999999999999999966532    3


Q ss_pred             CcccccccCCCcccccccccccccccceE
Q 013259          376 TWSDQRNDLNDEDEDGFVKSSLEQTIGFS  404 (447)
Q Consensus       376 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  404 (447)
                      ..+...|.+..|.++..|.......+|..
T Consensus        81 ~~F~~~D~d~~G~i~~~el~~~l~~~g~~  109 (173)
T 1alv_A           81 AIYKQFDVDRSGTIGSSELPGAFEAAGFH  109 (173)
T ss_dssp             HHHHHHCTTCCSSBCTTTHHHHHHHHTCC
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHHHcCCC
Confidence            44566677788888877766555555544

>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}

Probab=98.78  E-value=4.4e-09  Score=95.70  Aligned_cols=67  Identities=22%  Similarity=0.339  Sum_probs=58.4

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh---ccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhccCc
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQL---NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTTW  377 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~---g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~~~  377 (447)
                      ...++.+|+.||+|++ |+|+.+||+.+|..+   |       ++.++++.+|..+|.|+||.|+|+||+.+|.....
T Consensus       132 ~~~l~~~F~~~D~d~d-G~Is~~El~~~l~~~~~~g-------~~~~e~~~~~~~~D~d~dG~Is~~EF~~~~~~~~~  201 (226)
T 2lvv_A          132 IFELTVMFDTMDKDGS-LLLELQEFKEALPKLKEWG-------VDITDATTVFNEIDTNGSGVVTFDEFSCWAVTKKL  201 (226)
T ss_dssp             HHHHHHHHHHHSCSSC-CEECHHHHHHHHHHHHHHT-------CCCCSCHHHHHHHCCSCSSCEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCC-CeEcHHHHHHHHHHHhhcC-------CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhcCC
Confidence            4588999999999999 999999999999987   6       33345999999999999999999999988765444

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}

Probab=98.78  E-value=1.1e-09  Score=97.42  Aligned_cols=115  Identities=14%  Similarity=0.212  Sum_probs=88.4

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhcc-----
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT-----  375 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~-----  375 (447)
                      .....++++|..||.|++ |+|+..||+.+|..+|     ..++..++..++..+    +|.|+|+||+..+...     
T Consensus        54 ~~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~lg-----~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~~~~~~~~  123 (196)
T 3dtp_E           54 HQVQEFKEAFQLIDQDKD-GFISKNDIRATFDSLG-----RLCTEQELDSMVAEA----PGPINFTMFLTIFGDRIAGTD  123 (196)
T ss_dssp             TTHHHHHHHHHHHCCSCS-SBCCHHHHHHHHHTTS-----CCCCHHHHHHHHTTS----SSCCBHHHHHHHHHHCCCSSC
T ss_pred             HHHHHHHHHHHHHCCCCC-CcCCHHHHHHHHHHhC-----CCCCHHHHHHHHHHc----cCCCcHHHHHHHHHHHhcCCC
Confidence            345678999999999999 9999999999999999     889999999999887    8999999999776432     


Q ss_pred             ------CcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          376 ------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       376 ------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                            ..+...|.+..|.+...|..... .+|..++...     +..  ....+|.+.+|.|+
T Consensus       124 ~~~~l~~~F~~~D~d~~G~Is~~El~~~l-~~g~~~~~~~-----~~~--l~~~~D~d~dG~I~  179 (196)
T 3dtp_E          124 EEDVIVNAFNLFDEGDGKCKEETLKRSLT-TWGEKFSQDE-----VDQ--ALSEAPIDGNGLID  179 (196)
T ss_dssp             CHHHHHHHHHTTCSSSSCCBHHHHHHHHH-HSSSCCCHHH-----HHH--HHHSSCEETTEECH
T ss_pred             cHHHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCCHHH-----HHH--HHHHcCCCCCCEEe
Confidence                  23456677778888887776666 6665433322     222  34567778888765

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}

Probab=98.78  E-value=1e-08  Score=90.23  Aligned_cols=63  Identities=10%  Similarity=0.095  Sum_probs=58.2

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ...++.+|+.+|+|++ |+|+.+||+.++..+|       +++++++.+|+.+|.|+||.|+|+||+..+.
T Consensus       108 ~~~~~~~F~~~D~d~d-G~I~~~E~~~~l~~~g-------~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~  170 (191)
T 2ccm_A          108 TKYMNFMFDVNDTSGD-NIIDKHEYSTVYMSYG-------IPKSDCDAAFDTLSDGGKTMVTREIFARLWT  170 (191)
T ss_dssp             HHHHHHHHHHHCTTCS-SBCCHHHHHHHHHTTT-------CCHHHHHHHHHHHTTTTTSCCBHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHhC-------CCHHHHHHHHHHhCCCCCCCcCHHHHHHHHH
Confidence            3568899999999999 9999999999999887       8899999999999999999999999997664

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A

Probab=98.77  E-value=5e-09  Score=94.56  Aligned_cols=71  Identities=24%  Similarity=0.412  Sum_probs=58.6

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHH----HHHHcCCCCCceeehHHHHHHHhc
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKD----LWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~----~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ...++.+|+.||.|++ |+|+.+||+.+|..+|.......+++++++.    +|..+|.|+||.|+|+||+..+..
T Consensus       128 ~~~l~~~F~~~D~d~d-G~Is~~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~  202 (214)
T 2l4h_A          128 DIKSHYAFRIFDFDDD-GTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR  202 (214)
T ss_dssp             HHHHHHHHHHHCTTCS-SCBCHHHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHHCCSCCSSBCSHHHHHHHHT
T ss_pred             HHHHHHHHHHhCCCCC-CcCCHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence            4578999999999999 9999999999999987100001577777765    999999999999999999977643

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A

Probab=98.77  E-value=5.8e-09  Score=90.49  Aligned_cols=80  Identities=13%  Similarity=0.084  Sum_probs=66.6

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc----cCccc
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTWSD  379 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~----~~~~~  379 (447)
                      ..++.+|+.+|+|++ |+|+.+||+.+|..+|     ..+++++++.++..+| |++|.|+|+||+..+..    ...+.
T Consensus        77 ~~~~~~F~~~D~d~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~~~~~~d-d~dg~i~~~eF~~~~~~~~~~~~~F~  149 (173)
T 1alv_A           77 KKWQAIYKQFDVDRS-GTIGSSELPGAFEAAG-----FHLNEHLYSMIIRRYS-DEGGNMDFDNFISCLVRLDAMFRAFK  149 (173)
T ss_dssp             HHHHHHHHHHCTTCC-SSBCTTTHHHHHHHHT-----CCCCHHHHHHHHHHHT-CSSSCBCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCC-CCCCHHHHHHHHHHcC-----CCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHHHHHHHHHHH
Confidence            578899999999999 9999999999999999     8899999999999999 99999999999976643    22334


Q ss_pred             ccccCCCcccc
Q 013259          380 QRNDLNDEDED  390 (447)
Q Consensus       380 ~~~~~~~~~~~  390 (447)
                      ..|.+..|.+.
T Consensus       150 ~~D~d~~G~i~  160 (173)
T 1alv_A          150 SLDKDGTGQIQ  160 (173)
T ss_dssp             HHSSSCCSEEE
T ss_pred             HhCCCCCCeec
Confidence            44555555443

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5

Probab=98.77  E-value=4.7e-09  Score=87.43  Aligned_cols=92  Identities=11%  Similarity=0.011  Sum_probs=71.9

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhccC-----
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTT-----  376 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~~-----  376 (447)
                      ....++++|..+|.|++ |+|+.+||+.+|+.+|     ..++.+++..++.    +++|.|+|+||+..+....     
T Consensus         3 ~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~   72 (140)
T 1ggw_A            3 DDSPYKQAFSLFDRHGT-GRIPKTSIGDLLRACG-----QNPTLAEITEIES----TLPAEVDMEQFLQVLNRPNGFDMP   72 (140)
T ss_dssp             CCTTTHHHHHHTCSSSS-SEECHHHHHHHHHHTS-----CCCCHHHHHHHHT----TSCSSEEHHHHHHHHCTTSSSSSS
T ss_pred             hHHHHHHHHHHHCCCCC-CcCCHHHHHHHHHHcC-----CCCCHHHHHHHHh----CCCCcCcHHHHHHHHHHHhcccCc
Confidence            34678999999999999 9999999999999999     7899999999987    8899999999997663321     


Q ss_pred             --------cccccccCCCcccccccccccccccce
Q 013259          377 --------WSDQRNDLNDEDEDGFVKSSLEQTIGF  403 (447)
Q Consensus       377 --------~~~~~~~~~~~~~~~~~~~~~~~~~g~  403 (447)
                              .+...|.+..|.+...|.......+|.
T Consensus        73 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~  107 (140)
T 1ggw_A           73 GDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGE  107 (140)
T ss_dssp             CCHHHHHHHHHTTCSSCSSCCCHHHHHHHHHHHHS
T ss_pred             ccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCC
Confidence                    123456666677766665554545553

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}

Probab=98.76  E-value=7.9e-09  Score=92.47  Aligned_cols=61  Identities=16%  Similarity=0.323  Sum_probs=56.8

Q ss_pred             HHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          306 ETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       306 l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ++.+|+.+|+|++ |+|+.+||+.++..+|       +++++++.+|..+|.|+||.|+|+||+..+..
T Consensus       130 ~~~~F~~~D~d~~-G~Is~~El~~~l~~~g-------~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~  190 (208)
T 2hpk_A          130 SNSYYDVLDDDGD-GTVDVDELKTMMKAFD-------VPQEAAYTFFEKADTDKSGKLERTELVHLFRK  190 (208)
T ss_dssp             HHHHHHHHCTTCS-SSBCHHHHHHHHHHTT-------SCTTHHHHHHHHHCTTCCSSBCHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCC-CcCCHHHHHHHHHHhC-------cCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            7889999999999 9999999999999988       78889999999999999999999999976643

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}

Probab=98.76  E-value=1.1e-08  Score=89.82  Aligned_cols=65  Identities=20%  Similarity=0.266  Sum_probs=59.3

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      .....+..+|+.+|.|++ |+|+.+||+.++.  |     ..+++++++.++..+|.|+||.|+|+||+..|.
T Consensus       120 ~~~~~~~~~F~~~D~d~~-G~I~~~E~~~~l~--~-----~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  184 (191)
T 3khe_A          120 LSRERLLAAFQQFDSDGS-GKITNEELGRLFG--V-----TEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQ  184 (191)
T ss_dssp             CCHHHHHHHHHHHCTTCS-SEECHHHHHHHTT--S-----SCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred             chHHHHHHHHHHHCCCCc-CcCCHHHHHHHHc--c-----CCCCHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            345678999999999999 9999999999998  6     779999999999999999999999999997663

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A

Probab=98.75  E-value=1.7e-08  Score=88.39  Aligned_cols=65  Identities=18%  Similarity=0.339  Sum_probs=58.6

Q ss_pred             hhHHHHh--hhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          304 LTETDAF--AFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       304 ~~l~~~F--~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ..+..+|  ..||.|++ |+|+.+||+.+|..+|     ..+++++++.+|+.+|.|+||.|+|+||+..+..
T Consensus       100 ~~~~~~f~~~~fD~d~~-G~I~~~E~~~~l~~~g-----~~~~~~~~~~~~~~~D~d~dG~i~~~ef~~~~~~  166 (186)
T 2hps_A          100 AVIQSLIMYDCIDTDKD-GYVSLPEFKAFLQAVG-----PDLTDDKAITCFNTLDFNKNGQISRDEFLVTVND  166 (186)
T ss_dssp             TTHHHHHHHHHHCTTCS-SEEEHHHHHHHHHHHC-----TTCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHccCCCC-CcCCHHHHHHHHHHhC-----CCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence            4556666  88899999 9999999999999999     8899999999999999999999999999976643

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A

Probab=98.75  E-value=1.4e-08  Score=100.77  Aligned_cols=66  Identities=32%  Similarity=0.552  Sum_probs=61.5

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ....++.+|+.+|+|++ |+|+.+||+.+|..+|     ..+++++++.++..+|.|+||.|+|+||+..|.
T Consensus       383 ~~e~l~~aFk~fD~D~d-G~Is~eELr~~L~~lG-----~~ls~eei~~Lf~~~D~D~DG~IsfdEFv~~L~  448 (450)
T 3sg6_A          383 SEEEIREAFRVFDKDGN-GYISAAELRHVMTNLG-----EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT  448 (450)
T ss_dssp             CHHHHHHHHHHHCTTCS-SEECHHHHHHHHHHHT-----CCCCHHHHHHHHHHHCTTSSSSEEHHHHHHHHC
T ss_pred             hhhHHHHHHHHhCCCCC-CeEeHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            44578999999999999 9999999999999999     889999999999999999999999999997664

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}

Probab=98.75  E-value=1.4e-09  Score=97.05  Aligned_cols=117  Identities=12%  Similarity=0.093  Sum_probs=82.4

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhccC---
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTT---  376 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~~---  376 (447)
                      ......++++|..+|.|++ |+|+.+||+.+ ..+|     ..++   ++.++..+|.|++|.|+|+||+..+....   
T Consensus        25 ~~~~~~l~~~F~~~D~d~d-G~I~~~El~~~-~~lg-----~~~~---~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~~~   94 (202)
T 2bec_A           25 QASLLRLHHRFRALDRNKK-GYLSRMDLQQI-GALA-----VNPL---GDRIIESFFPDGSQRVDFPGFVRVLAHFRPVE   94 (202)
T ss_dssp             HHHHHHHHHHHHHHCSSCS-SCCCHHHHHTC-HHHH-----HSTT---HHHHHHTTSCSSCCCCCHHHHHHHHGGGSCCC
T ss_pred             HHHHHHHHHHHHHHCCCCC-CCcCHHHHHHH-HhcC-----CCcc---HHHHHHHhCCCCCCcCcHHHHHHHHHHhcccc
Confidence            3456678999999999999 99999999999 8888     4444   89999999999999999999997764322   


Q ss_pred             ------------------------cccccccCCCccccccccccccccc-ceEEeccccCCcccccCCCCCC----CCCC
Q 013259          377 ------------------------WSDQRNDLNDEDEDGFVKSSLEQTI-GFSVKNAVLFPPEVEKGRWPEN----YSLS  427 (447)
Q Consensus       377 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~----~~~~  427 (447)
                                              .+...|.+..|.++..|.......+ |..++...     +..  ....    +|.+
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~-----~~~--~~~~~~~~~D~d  167 (202)
T 2bec_A           95 DEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQ-----LEN--IADRTVQEADED  167 (202)
T ss_dssp             HHHHC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHSCCSCCCHHH-----HHH--HHHHHHHHHCSS
T ss_pred             hhcccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCCCCCHHH-----HHH--HHHHHHHHcCCC
Confidence                                    1234455666666666655444444 43322221     111  2233    7888


Q ss_pred             CCccee
Q 013259          428 DHARLT  433 (447)
Q Consensus       428 ~~~~l~  433 (447)
                      .+|.|+
T Consensus       168 ~dG~Is  173 (202)
T 2bec_A          168 GDGAVS  173 (202)
T ss_dssp             CSSSEE
T ss_pred             CCCcCc
Confidence            888875

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A

Probab=98.74  E-value=1.3e-08  Score=92.73  Aligned_cols=73  Identities=21%  Similarity=0.307  Sum_probs=58.2

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhcc-CC------CCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNL-TG------HKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~-~~------~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      .....++.+|+.+|+|++ |+|+.+||..++..++- .|      .....++++++.+|+.+|.|+||.|+|+||++.+.
T Consensus       135 ~~~~~l~~~F~~~D~d~d-G~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~  213 (229)
T 3dd4_A          135 TVQEKLNWAFNLYDINKD-GYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQ  213 (229)
T ss_dssp             CHHHHHHHHHHHHCTTCS-SCCBHHHHHHHHHHHHHHCC-----------CCTHHHHHHHHHCSSCSSBCCHHHHHHHHH
T ss_pred             ChHHHHHHHHHHhCCCCC-CeECHHHHHHHHHHHHHHhccccCCCcchhhHHHHHHHHHHHhcCCCCCcEeHHHHHHHHH
Confidence            345678999999999999 99999999999987610 00      01557788999999999999999999999997774


Q ss_pred             c
Q 013259          374 K  374 (447)
Q Consensus       374 ~  374 (447)
                      .
T Consensus       214 ~  214 (229)
T 3dd4_A          214 K  214 (229)
T ss_dssp             T
T ss_pred             h
Confidence            3

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5

Probab=98.73  E-value=7.3e-09  Score=90.39  Aligned_cols=63  Identities=10%  Similarity=0.159  Sum_probs=57.5

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ..++.+|+.+|+|++ |+|+.+||+.++..+|       ++++++..+|+.+|.|+||.|+|+||+..+..
T Consensus       105 ~~~~~~F~~~D~d~d-G~Is~~E~~~~l~~~g-------~~~~~~~~~~~~~D~d~dG~i~~~ef~~~~~~  167 (185)
T 2sas_A          105 NRIPFLFKGMDVSGD-GIVDLEEFQNYCKNFQ-------LQCADVPAVYNVITDGGKVTFDLNRYKELYYR  167 (185)
T ss_dssp             HHHHHHHHHHCTTSS-SCCCHHHHHHHTTSSC-------CCCSSHHHHHHHHHTTTTSCCSHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCC-CeEcHHHHHHHHHHhC-------CCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence            578899999999999 9999999999998877       66888999999999999999999999976643

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A

Probab=98.73  E-value=1.7e-08  Score=86.71  Aligned_cols=63  Identities=11%  Similarity=0.150  Sum_probs=58.5

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ..++.+|+.+|+|++ |+|+.+||+.+|..+|     ..+++++++.++..+  |++|.|+|+||+..+..
T Consensus        70 ~~~~~~F~~~D~d~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~  132 (165)
T 1k94_A           70 NAWKENFMTVDQDGS-GTVEHHELRQAIGLMG-----YRLSPQTLTTIVKRY--SKNGRIFFDDYVACCVK  132 (165)
T ss_dssp             HHHHHHHHHHCTTCC-SBCCHHHHHHHHHHTT-----CCCCHHHHHHHHHHH--CBTTBCBHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCC-ceECHHHHHHHHHHhC-----CCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHH
Confidence            578899999999999 9999999999999999     889999999999999  89999999999977743

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5

Probab=98.71  E-value=1.2e-08  Score=90.89  Aligned_cols=89  Identities=8%  Similarity=0.038  Sum_probs=72.3

Q ss_pred             hhhhHHHHhhhhcCC-CCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhcc-----
Q 013259          302 ASLTETDAFAFLKAD-NDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT-----  375 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~-~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~-----  375 (447)
                      ...+++++|..||.| ++ |+|+.+||+.+|..+|     ...+.++++.++..+|.|++|.|+|+||+..+...     
T Consensus        20 ~~~el~~~f~~~D~~~~~-G~i~~~e~~~~l~~~~-----~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~   93 (204)
T 1jba_A           20 DAAQLQEWYKKFLEECPS-GTLFMHEFKRFFKVPD-----NEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTL   93 (204)
T ss_dssp             HHHHHHHHHHHHHSSSTT-CCEEHHHHHHHHHCCS-----SSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCC
T ss_pred             CHHHHHHHHHHHHhhCCC-CCcCHHHHHHHHHHhc-----CCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCH
Confidence            456788999999999 89 9999999999999999     77899999999999999999999999999766321     


Q ss_pred             -----CcccccccCCCcccccccccc
Q 013259          376 -----TWSDQRNDLNDEDEDGFVKSS  396 (447)
Q Consensus       376 -----~~~~~~~~~~~~~~~~~~~~~  396 (447)
                           ..+...|.+..|.++..|...
T Consensus        94 ~~~~~~~F~~~D~d~~G~I~~~E~~~  119 (204)
T 1jba_A           94 EHKLKWTFKIYDKDRNGCIDRQELLD  119 (204)
T ss_dssp             THHHHHHHHHHCSSCSSCBCHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence                 123445666666666665543

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8

Probab=98.71  E-value=1.8e-08  Score=86.80  Aligned_cols=79  Identities=11%  Similarity=0.138  Sum_probs=65.4

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc----cCccc
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTWSD  379 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~----~~~~~  379 (447)
                      ..++.+|+.+|.|++ |+|+.+||+.+|..+|     ..+++++++.++..+  |++|.|+|+||+..+..    ...+.
T Consensus        72 ~~~~~~F~~~D~d~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~~~~~~~F~  143 (167)
T 1gjy_A           72 NGWRQHFISFDSDRS-GTVDPQELQKALTTMG-----FRLNPQTVNSIAKRY--STSGKITFDDYIACCVKLRALTDSFR  143 (167)
T ss_dssp             HHHHHHHHHHCTTCC-SEECHHHHHHHHHTTT-----CCCCHHHHHHHHHHT--CBTTBEEHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCC-CcCCHHHHHHHHHHcC-----CCCCHHHHHHHHHHh--CcCCcCcHHHHHHHHHHHHHHHHHHH
Confidence            578899999999999 9999999999999999     889999999999999  88999999999976633    23344


Q ss_pred             ccccCCCcccc
Q 013259          380 QRNDLNDEDED  390 (447)
Q Consensus       380 ~~~~~~~~~~~  390 (447)
                      ..|.+..|.+.
T Consensus       144 ~~D~d~~G~i~  154 (167)
T 1gjy_A          144 RRDSAQQGMVN  154 (167)
T ss_dssp             HHCTTCCSEEE
T ss_pred             HhCCCCCeeEE
Confidence            44555555443

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E

Probab=98.71  E-value=3.5e-09  Score=92.60  Aligned_cols=93  Identities=11%  Similarity=0.003  Sum_probs=70.4

Q ss_pred             hhhhHHHHhhhhcC-CCCCCcccHHHHHHHHHHhccCCCCCC-CCHHHHHHHHHHcCCCCCceeehHHHHHHHhc-----
Q 013259          302 ASLTETDAFAFLKA-DNDGDYITYSGFCEALEQLNLTGHKHG-LADEETKDLWVQADIDGNGVVDYKEFQQRIWK-----  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~-~~~~G~i~~~el~~~l~~~g~~~~~~~-~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~-----  374 (447)
                      ...++.++|+.||. |++ |.|+.+||+.++..+|     .. .++.+++.+++.+|.|++|.|+|+||+..+..     
T Consensus        16 s~~~i~~l~~~fd~~d~~-G~i~~~e~~~~l~~~~-----~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~   89 (183)
T 1s6c_A           16 TKRELQVLYRGFKNEXPS-GVVNEETFKQIYAQFF-----PHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGT   89 (183)
T ss_dssp             CHHHHHHHHHHHHHHCTT-SEECHHHHHHHHHHHS-----TTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCC
T ss_pred             CHHHHHHHHHHHHHhCCC-CcCCHHHHHHHHHHHc-----CCCChHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHcCCC
Confidence            34466777777777 899 9999999999999987     44 78899999999999999999999999976632     


Q ss_pred             -----cCcccccccCCCcccccccccccccc
Q 013259          375 -----TTWSDQRNDLNDEDEDGFVKSSLEQT  400 (447)
Q Consensus       375 -----~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (447)
                           ..++...|.+..|.++..|.......
T Consensus        90 ~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~  120 (183)
T 1s6c_A           90 VHEKLRWTFNLYDINKDGYINKEEMMDIVKA  120 (183)
T ss_dssp             HHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence                 22334556667777776665443333

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E

Probab=98.70  E-value=3.3e-08  Score=86.29  Aligned_cols=72  Identities=14%  Similarity=0.225  Sum_probs=56.9

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh----ccCCCCCCCC----HHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQL----NLTGHKHGLA----DEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~----g~~~~~~~~~----~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .....++.+|+.+|.|++ |+|+.+||+.++..+    |.. ....++    +++++.+|+.+|.|+||.|+|+||+..+
T Consensus        89 ~~~~~~~~~f~~~D~d~~-G~i~~~e~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~  166 (183)
T 1s6c_A           89 TVHEKLRWTFNLYDINKD-GYINKEEMMDIVKAIYDMMGKY-TYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESX  166 (183)
T ss_dssp             CHHHHHHHHHHHHCTTCS-SCEEHHHHHHHHHHHHHHTC------------CHHHHHHHHHHHCTTCSSEECHHHHHHHT
T ss_pred             CHHHHHHHHHHHhCCCCC-CeEcHHHHHHHHHHHHHHhccc-cCcCccHHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence            345678999999999999 999999999999886    510 001133    4889999999999999999999999766


Q ss_pred             hc
Q 013259          373 WK  374 (447)
Q Consensus       373 ~~  374 (447)
                      ..
T Consensus       167 ~~  168 (183)
T 1s6c_A          167 QE  168 (183)
T ss_dssp             TS
T ss_pred             hc
Confidence            43

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A

Probab=98.70  E-value=3.8e-09  Score=97.91  Aligned_cols=124  Identities=14%  Similarity=0.145  Sum_probs=87.6

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh----ccCCCCCCCCHHHHHH----HHHHcCCCCCceeehHHHHHHH
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQL----NLTGHKHGLADEETKD----LWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~----g~~~~~~~~~~~~~~~----~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .....++.+|+.+|.|++ |+|+.+||+.+|..+    |     ..+++++++.    ++..+|.|++|.|+|+||+..+
T Consensus       100 ~~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~~~~~g-----~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~  173 (263)
T 2f33_A          100 KSCEEFMKTWRKYDTDHS-GFIETEELKNFLKDLLEKAN-----KTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLL  173 (263)
T ss_dssp             SCHHHHHHHHTTSSTTTC-SSBCHHHHHHHHHHHHHHHT-----SCCCHHHHHHHHHHHHHHTCSSSSSCBCHHHHHHHS
T ss_pred             cHHHHHHHHHHHHCCCCC-CCcCHHHHHHHHHHHHhhcC-----CCCCHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHH
Confidence            345678999999999999 999999999999988    8     7899998887    9999999999999999999655


Q ss_pred             hc------------------cCcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCC-CCCCCCccee
Q 013259          373 WK------------------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPEN-YSLSDHARLT  433 (447)
Q Consensus       373 ~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~  433 (447)
                      ..                  ...+...|.+..|.+...|.......+|... ...+.+.++..  +... +|.+.+|.|+
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~El~~~l~~~~~~~-~~~~~~~e~~~--~~~~~~D~d~dG~i~  250 (263)
T 2f33_A          174 PVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEKN-KQELDINNIST--YKKNIMALSDGGKLY  250 (263)
T ss_dssp             CTTTCSHHHHHHTCCCHHHHHHHHHHHCCSSSSCEEHHHHHHHHHHHHHHC-TTTCCTTTHHH--HHHHHHTTSBTTEEC
T ss_pred             HHHHHHHHHhcCcchHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHhc-CCCCCHHHHHH--HHHHhhccCCCCeEc
Confidence            32                  1223455667777777766555444444310 01122222222  2222 4778888765

>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}

Probab=98.70  E-value=5.3e-10  Score=101.86  Aligned_cols=119  Identities=11%  Similarity=0.070  Sum_probs=87.5

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHH-HHHHhccCCCCCCCCHHHHHHHHHHc---------CCCCCceeehHHHH
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCE-ALEQLNLTGHKHGLADEETKDLWVQA---------DIDGNGVVDYKEFQ  369 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~-~l~~~g~~~~~~~~~~~~~~~~~~~~---------D~~~~g~i~~~EF~  369 (447)
                      ......++++|..+|.|++ |+|+.+||+. +++.+|     ..++.++++.++..+         |.|++|.|+|+||+
T Consensus        47 ~~~~~~l~~~F~~~D~d~d-G~Is~~El~~~l~~~lg-----~~~~~~~~~~~~~~~f~~~~~~~~D~d~~G~I~~~EF~  120 (226)
T 2lvv_A           47 AESKSRRIELFKQFDTNGT-GKLGFREVLDGCYGILK-----LDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEEDLVEFL  120 (226)
T ss_dssp             HHHHHHHHHHHHHHGGGSC-SCBCSHHHHHHHHHTTC-----CTTTSSSCHHHHHHHHHHHHHHHHHHSCCCCCSCBCHH
T ss_pred             HHHHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHHhC-----CCCCHHHHHHHHHHHHHHhcccCCCCCCCCcCCHHHHH
Confidence            3456789999999999999 9999999999 556668     667777777787777         99999999999999


Q ss_pred             HHH--hc--------cCcccccccCCCccccccccccccccc---ceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          370 QRI--WK--------TTWSDQRNDLNDEDEDGFVKSSLEQTI---GFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       370 ~~~--~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                      ..+  ..        ...+...|.+..|.+...|.......+   |....       ++..  ....+|.+.+|.|+
T Consensus       121 ~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~g~~~~-------e~~~--~~~~~D~d~dG~Is  188 (226)
T 2lvv_A          121 EFRLMLCYIYDIFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDIT-------DATT--VFNEIDTNGSGVVT  188 (226)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSCSSCCEECHHHHHHHHHHHHHHTCCCC-------SCHH--HHHHHCCSCSSCEE
T ss_pred             HHHHHHHhccCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhhcCCCHH-------HHHH--HHHHhCCCCCCcEe
Confidence            743  11        233566777888888877766555444   44332       2222  34567888888876

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A

Probab=98.70  E-value=2.4e-08  Score=88.70  Aligned_cols=78  Identities=13%  Similarity=0.146  Sum_probs=64.5

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc----cCccc
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTWSD  379 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~----~~~~~  379 (447)
                      ..++.+|+.+|+|++ |+|+.+||+.+|..+|     ..+++++++.++..+  |+||.|+|+||+..+..    ...+.
T Consensus       103 ~~~~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~~~~~l~~~~--d~dg~i~~~eF~~~~~~~~~~~~~F~  174 (198)
T 1juo_A          103 NGWRQHFISFDTDRS-GTVDPQELQKALTTMG-----FRLSPQAVNSIAKRY--STNGKITFDDYIACCVKLRALTDSFR  174 (198)
T ss_dssp             HHHHHHHHTTCTTCC-SEECHHHHHHHHHHTT-----CCCCHHHHHHHHHHT--CSSSSEEHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCC-CcCCHHHHHHHHHHhC-----CCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHHHHHHHHHH
Confidence            578899999999999 9999999999999999     889999999999999  89999999999976633    22234


Q ss_pred             ccccCCCccc
Q 013259          380 QRNDLNDEDE  389 (447)
Q Consensus       380 ~~~~~~~~~~  389 (447)
                      ..|.+..|.+
T Consensus       175 ~~D~d~~G~i  184 (198)
T 1juo_A          175 RRDTAQQGVV  184 (198)
T ss_dssp             HTCTTCCSEE
T ss_pred             HhCCCCCCeE
Confidence            4444444444

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}

Probab=98.70  E-value=1.5e-08  Score=88.63  Aligned_cols=63  Identities=16%  Similarity=0.338  Sum_probs=55.9

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCC--------ceeehHHHHHHHhc
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGN--------GVVDYKEFQQRIWK  374 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~--------g~i~~~EF~~~~~~  374 (447)
                      ..++.+|+.+|+|++ |+|+.+||+.+|.  +     ..+++++++.+|..+|.|+|        |.|+|+||+..|..
T Consensus       108 ~~~~~~F~~~D~d~~-G~I~~~El~~~l~--~-----~~~~~~~~~~~~~~~d~~~d~~~~~~~~G~i~~~eF~~~l~~  178 (180)
T 3mse_B          108 TFLKAAFNKIDKDED-GYISKSDIVSLVH--D-----KVLDNNDIDNFFLSVHSIKKGIPREHIINKISFQEFKDYMLS  178 (180)
T ss_dssp             CHHHHHHHHHCTTCS-SCBCHHHHHHHTT--T-----SSCCHHHHHHHHHHHHTC---------CCCBCHHHHHHHHHT
T ss_pred             HHHHHHHHHHCCCCC-CCCCHHHHHHHHc--C-----CCCCHHHHHHHHHHhhhccCcccccccCCeeeHHHHHHHHHh
Confidence            678999999999999 9999999999998  4     55999999999999999988        99999999977643

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A

Probab=98.69  E-value=6.2e-09  Score=90.01  Aligned_cols=119  Identities=11%  Similarity=0.074  Sum_probs=81.0

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHH-H--------HHHHHHcCCCCCceeehHHHHHHH
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEE-T--------KDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~-~--------~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ....++++|..+|.|++ |+|+.+||+.+|..+|- ..+..++..+ +        +.+++.+|  ++|.|+|+||+..+
T Consensus         4 ~~~~l~~~F~~~D~d~~-G~i~~~El~~~l~~~~~-~~g~~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~~~~   79 (174)
T 1q80_A            4 WVQKMKTYFNRIDFDKD-GAITRMDFESMAERFAK-ESEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFINSM   79 (174)
T ss_dssp             HHHHHHHHHHHHCTTCS-SEESHHHHHHHHHHHHH-HSSCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCC-CcEeHHHHHHHHHHHHH-HhCCCCCcHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHHHHH
Confidence            35678999999999999 99999999999988750 0003467766 6        46788999  89999999999766


Q ss_pred             hccC---------------cccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          373 WKTT---------------WSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       373 ~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                      ....               .+...|.+..|.+...|........|+  +     ..++..  ....+|.+.+|.|+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~--~-----~~~~~~--~~~~~D~d~dg~i~  146 (174)
T 1q80_A           80 KEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGL--D-----KTMAPA--SFDAIDTNNDGLLS  146 (174)
T ss_dssp             HHHTTSTTCHHHHHTHHHHHHHHHCTTSSSSBCHHHHHHHHHHHTC--C-----GGGHHH--HHHHHCTTCSSSBC
T ss_pred             HHHcCcccHHHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHcCC--C-----HHHHHH--HHHHhCCCCCceEe
Confidence            4321               234456666777776665544444442  1     112222  33457788888875

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=98.68  E-value=5.6e-09  Score=92.14  Aligned_cols=64  Identities=28%  Similarity=0.480  Sum_probs=58.2

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ...++.+|+.+|+|++ |+|+.+||+.+|..+|       +++++++.+|+.+|.|+||.|+|+||+..|..
T Consensus        81 ~~~l~~~F~~~D~d~d-G~Is~~El~~~l~~~g-------~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~  144 (188)
T 1s6i_A           81 EENLVSAFSYFDKDGS-GYITLDEIQQACKDFG-------LDDIHIDDMIKEIDQDNDGQIDYGEFAAMMRK  144 (188)
T ss_dssp             CCSTHHHHHHTTTTCS-SEEEHHHHHHTTTTTT-------CCTTHHHHHHHHHCSSSSSEEETTHHHHTTSC
T ss_pred             HHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHcC-------CCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence            4578999999999999 9999999999998877       67789999999999999999999999976654

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...

Probab=98.67  E-value=1.5e-08  Score=86.03  Aligned_cols=116  Identities=11%  Similarity=0.160  Sum_probs=83.5

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhcc----
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT----  375 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~----  375 (447)
                      ......++++|..+|.|++ |+|+.+||+.+|+.+|     ..++.+++..++.    +++|.|+|+||+..+...    
T Consensus        14 ~~~~~~l~~~F~~~D~d~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~   83 (156)
T 1wdc_B           14 QKQIQEMKEAFSMIDVDRD-GFVSKEDIKAISEQLG-----RAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSGT   83 (156)
T ss_dssp             HHHHHHHHHHHHHHCTTCS-SSCCHHHHHHHHHHHS-----SCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCSC
T ss_pred             HHHHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHhC-----CCCCHHHHHHHHH----hCCCcCcHHHHHHHHHHHhcCC
Confidence            3456678999999999999 9999999999999999     8899999999985    478999999999766421    


Q ss_pred             -------CcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          376 -------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       376 -------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                             ..+...|.+..|.+...|.......+|..++...     +..  ....+|.+ +|.|+
T Consensus        84 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~-----~~~--~~~~~d~~-dg~i~  140 (156)
T 1wdc_B           84 DSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDE-----MRM--TFKEAPVE-GGKFD  140 (156)
T ss_dssp             CCHHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHH-----HHH--HHHHCCEE-TTEEC
T ss_pred             ChHHHHHHHHHHHCcCCCCccCHHHHHHHHHHhCCCCCHHH-----HHH--HHHhcCCC-CCEEe
Confidence                   2234556677777777666555555554333222     111  23456667 77664

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=98.67  E-value=5.4e-08  Score=98.85  Aligned_cols=66  Identities=24%  Similarity=0.366  Sum_probs=59.4

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      .....++.+|+.||+|++ |+|+.+||+.+|...+       +++++++.+|+.+|.|+||.|+|+||+++|..
T Consensus       415 ~~~~~~~~~F~~~D~d~d-G~I~~~El~~~l~~~~-------~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~  480 (484)
T 3nyv_A          415 LSRERLERAFRMFDSDNS-GKISSTELATIFGVSD-------VDSETWKSVLSEVDKNNDGEVDFDEFQQMLLK  480 (484)
T ss_dssp             HHHHHHHHHHHHHCTTCC-SEEEHHHHHHHHHHTT-------CCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHCCCCC-CcCCHHHHHHHHHhcC-------CCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHh
Confidence            345678999999999999 9999999999998755       88999999999999999999999999977643

>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}

Probab=98.67  E-value=1.2e-08  Score=88.88  Aligned_cols=92  Identities=15%  Similarity=0.059  Sum_probs=71.1

Q ss_pred             cCCCCCCcccHHHHHHHHHHhccCC-CCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc----cCcccccccCCCcc
Q 013259          314 KADNDGDYITYSGFCEALEQLNLTG-HKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTWSDQRNDLNDED  388 (447)
Q Consensus       314 D~~~~~G~i~~~el~~~l~~~g~~~-~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~----~~~~~~~~~~~~~~  388 (447)
                      ++|++ |+|+.+||+.+|+.++..+ .+..+++++++.++..+|.|++|.|+|+||+.++..    +..+...| +..|.
T Consensus        14 ~~~~d-G~I~~~EL~~~l~~l~~~~~~g~~~~~~~~~~l~~~~D~d~~G~I~f~EF~~~~~~~~~l~~aF~~fD-d~~G~   91 (174)
T 2i7a_A           14 LVPRG-SDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLDQEEFARLWKRLVHYQHVFQKVQ-TSPGV   91 (174)
T ss_dssp             SCC-C-CCEEHHHHHHHHHHHHC-----CCCCHHHHHHHHHHHCSSCSSEECHHHHHHHHHHHHHHHHHHHHHC-SBTTB
T ss_pred             cCCCC-CcCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHHHHHHHHHHhc-CCCCc
Confidence            57899 9999999999999982100 016789999999999999999999999999965422    34567778 88899


Q ss_pred             ccccccccccccc----ceEEec
Q 013259          389 EDGFVKSSLEQTI----GFSVKN  407 (447)
Q Consensus       389 ~~~~~~~~~~~~~----g~~~~~  407 (447)
                      ++..|.......+    |+.++.
T Consensus        92 I~~~El~~~l~~l~~~~G~~~~~  114 (174)
T 2i7a_A           92 LLSSDLWKAIENTDFLRGIFISR  114 (174)
T ss_dssp             EEGGGHHHHHHTCGGGTTCCCCH
T ss_pred             CCHHHHHHHHHHhHhccCCCCCH
Confidence            9888877666666    765443

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A

Probab=98.66  E-value=5.2e-08  Score=85.53  Aligned_cols=73  Identities=19%  Similarity=0.305  Sum_probs=59.0

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh----ccC---CCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQL----NLT---GHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~----g~~---~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      .....++.+|+.+|.|++ |+|+.+||..++..+    |..   ......++++++.+|+.+|.|+||.|+|+||+..+.
T Consensus        96 ~~~~~~~~~f~~~D~d~~-G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~ef~~~~~  174 (190)
T 1g8i_A           96 TLDEKLRWAFKLYDLDND-GYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSK  174 (190)
T ss_dssp             CHHHHHHHHHHHHCTTCS-SEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHHHHH
T ss_pred             CHHHHHHHHHHhhcCCCC-CeECHHHHHHHHHHHHHHhCCccCCccccccHHHHHHHHHHHhcCCCCCcEeHHHHHHHHH
Confidence            345678899999999999 999999999999873    300   000347788999999999999999999999997764


Q ss_pred             c
Q 013259          374 K  374 (447)
Q Consensus       374 ~  374 (447)
                      .
T Consensus       175 ~  175 (190)
T 1g8i_A          175 A  175 (190)
T ss_dssp             H
T ss_pred             h
Confidence            3

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}

Probab=98.65  E-value=9.3e-09  Score=88.22  Aligned_cols=65  Identities=28%  Similarity=0.439  Sum_probs=51.7

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ....+..+|+.+|.|++ |+|+.+||+.++..+|       +++++++.++..+|.|++|.|+|+||+..+..
T Consensus        97 ~~~~~~~~F~~~D~d~~-G~i~~~e~~~~l~~~~-------~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  161 (166)
T 2aao_A           97 REDHLFAAFTYFDKDGS-GYITPDELQQACEEFG-------VEDVRIEELMRDVDQDNDGRIDYNEFVAMMQK  161 (166)
T ss_dssp             TTHHHHHHHHHHCTTCS-SSBCHHHHHHHTCC---------------CCHHHHHCTTCSSSBCHHHHHHHHC-
T ss_pred             cHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHcC-------CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence            34578999999999999 9999999999998877       66888999999999999999999999976643

>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A

Probab=98.64  E-value=5.3e-09  Score=85.57  Aligned_cols=59  Identities=17%  Similarity=0.228  Sum_probs=52.2

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ....++++|+.||     |+|+.+||+.+|+.+|     .  ++++++.+++.+|.|+||.|+|+||+.+|
T Consensus        48 ~~~~l~~aF~~fD-----G~I~~~El~~~l~~lG-----~--t~~ei~~~~~~~D~d~dG~I~~~EF~~~~  106 (123)
T 2kld_A           48 TVDDISESLRQGG-----GKLNFDELRQDLKGKG-----H--TDAEIEAIFTKYDQDGDQELTEHEHQQMR  106 (123)
T ss_dssp             ---CCSCSSTTTT-----TCEEHHHHHHHTTTCC-----S--SHHHHHHHHHHHSSSSCCEECSHHHHHCS
T ss_pred             HHHHHHHHHHHhC-----CCCCHHHHHHHHHHhC-----C--CHHHHHHHHHHHcCCCCCcCcHHHHHHHH
Confidence            4467888999998     9999999999999999     5  99999999999999999999999999655

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5

Probab=98.63  E-value=6.6e-08  Score=87.73  Aligned_cols=72  Identities=14%  Similarity=0.238  Sum_probs=58.0

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh----ccCCC---CCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL----NLTGH---KHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~----g~~~~---~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ....++.+|+.+|.|++ |+|+.+||..++..+    |....   ....++++++.+|+.+|.|+||.|+|+||+..+..
T Consensus       123 ~~~~l~~~F~~~D~d~d-G~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~  201 (224)
T 1s1e_A          123 VHEKLRWTFNLYDINKD-GYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQE  201 (224)
T ss_dssp             HHHHHHHHHHHHCTTCC-SEECHHHHHHHHHHHHHHHTTCCCGGGCSSSHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHcCCCC-CeECHHHHHHHHHHHHHHhcccCCCCCCHhHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence            45678899999999999 999999999999876    51000   01223588999999999999999999999977744

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A

Probab=98.63  E-value=3.7e-08  Score=91.62  Aligned_cols=66  Identities=9%  Similarity=0.133  Sum_probs=59.4

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCC----CCCHHHHHH----HHHHcCCCCCceeehHHHHHHHhc
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKH----GLADEETKD----LWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~----~~~~~~~~~----~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ...++.+|+.+|+|++ |+|+.+||+.+|..++     .    .+++++++.    +|..+|.|+||.|+|+||+..|..
T Consensus       195 ~~~~~~~F~~~D~d~~-G~Is~~E~~~~l~~~~-----~~~~~~~~~~~~~~~~~~l~~~~D~d~dG~is~~EF~~~~~~  268 (272)
T 2be4_A          195 KRDFEKIFAHYDVSRT-GALEGPEVDGFVKDMM-----ELVRPSISGGDLDKFRECLLTHCDMNKDGKIQKSELALCLGL  268 (272)
T ss_dssp             HHHHHHHHHHHCTTCC-SEEETHHHHHHHHHHH-----HHHSSSCCHHHHHHHHHHHHHHHCCSTTCEEEHHHHHHHTTC
T ss_pred             HHHHHHHHHHhCCCCC-CeecHHHHHHHHHHHH-----HHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHcc
Confidence            4568899999999999 9999999999999887     4    689999887    999999999999999999976643

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A

Probab=98.63  E-value=4.8e-09  Score=97.23  Aligned_cols=93  Identities=10%  Similarity=0.034  Sum_probs=72.0

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCH------HHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLAD------EETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~------~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      .....++++|..+|+|++ |+|+.+||+.+|+.+|     ..++.      .+++.++..+|.|++|.|+|+||+..+..
T Consensus        13 ~~~~~l~~~F~~~D~d~~-G~i~~~El~~~l~~l~-----~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~Ef~~~~~~   86 (263)
T 2f33_A           13 ITASQFFEIWLHFDADGS-GYLEGKELQNLIQELL-----QARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPT   86 (263)
T ss_dssp             CCHHHHHHHHHHHCTTCS-SSBCSHHHHHHHHHHH-----HHHHHHTCCCCHHHHHHHHHHTTGGGCCBCHHHHHHHTTS
T ss_pred             ccHHHHHHHHHHhCCCCC-CCcCHHHHHHHHHHHH-----hhcCCCccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence            345679999999999999 9999999999999987     44444      78899999999999999999999976532


Q ss_pred             c-------------------CcccccccCCCccccccccccccc
Q 013259          375 T-------------------TWSDQRNDLNDEDEDGFVKSSLEQ  399 (447)
Q Consensus       375 ~-------------------~~~~~~~~~~~~~~~~~~~~~~~~  399 (447)
                      .                   ..+...|.+..|.+...|......
T Consensus        87 ~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~  130 (263)
T 2f33_A           87 EENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLK  130 (263)
T ss_dssp             CTTHHHHHGGGTSSCHHHHHHHHTTSSTTTCSSBCHHHHHHHHH
T ss_pred             hhhHHHHHHHhhccHHHHHHHHHHHHCCCCCCCcCHHHHHHHHH
Confidence            1                   233455666667666665443333

>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L

Probab=98.63  E-value=7.1e-09  Score=110.04  Aligned_cols=98  Identities=19%  Similarity=0.150  Sum_probs=82.9

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh--------ccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQL--------NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~--------g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ...++++|..+| |++ |.|+.+||+.+|..+        |     ..++.++++.|+..+|.|++|.|+|+||+..+..
T Consensus       531 ~~~l~~~F~~~D-d~d-G~Is~~El~~~L~~l~~~~~~~~g-----~~~s~~~~~~l~~~~D~d~~G~I~f~EF~~l~~~  603 (714)
T 3bow_A          531 GDGFRRLFAQLA-GED-AEISAFELQTILRRVLAKREDIKS-----DGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTK  603 (714)
T ss_dssp             CHHHHHHHHHHH-GGG-TSBCHHHHHHHHHHHHTTCTTSCC-----SCCCHHHHHHHHHHHCCSSCSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHc-CCC-CcCCHHHHHHHHHHHhhhcccccC-----CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            678999999999 999 999999999999997        6     7799999999999999999999999999966532


Q ss_pred             ----cCcccccccCCCcccccccccccccccceEEec
Q 013259          375 ----TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKN  407 (447)
Q Consensus       375 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  407 (447)
                          ...+...|.+..|.++..|.......+|..++.
T Consensus       604 ~~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G~~ls~  640 (714)
T 3bow_A          604 IQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPC  640 (714)
T ss_dssp             HHHHHHHHHHHCTTCCSSEEHHHHHHHHHHTTEECCH
T ss_pred             HHHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCH
Confidence                445667788888888888877666667765443

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A

Probab=98.62  E-value=6.4e-08  Score=87.86  Aligned_cols=67  Identities=15%  Similarity=0.238  Sum_probs=58.1

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHH----HhccCCCCCCCCHHHHHHHH----HHcCCCCCceeehHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALE----QLNLTGHKHGLADEETKDLW----VQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~----~~g~~~~~~~~~~~~~~~~~----~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ....++.+|+.+|.|++ |+|+.+||+.++.    .+|     ..+++++++.++    +.+|.|+||.|+|+||+..+.
T Consensus       120 ~~~~l~~~F~~~D~d~~-G~Is~~E~~~~l~~~~~~~g-----~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~EF~~~~~  193 (226)
T 2zfd_A          120 IDDKIHFSFQLYDLKQQ-GFIERQEVKQMVVATLAESG-----MNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVL  193 (226)
T ss_dssp             HHHHHHHHHHHHCTTSS-SSEEHHHHHHHHHHHHHHTT-----CCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCC-CcccHHHHHHHHHHHHHHcC-----CCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            34578999999999999 9999999999996    567     789998886665    499999999999999998775


Q ss_pred             c
Q 013259          374 K  374 (447)
Q Consensus       374 ~  374 (447)
                      .
T Consensus       194 ~  194 (226)
T 2zfd_A          194 R  194 (226)
T ss_dssp             H
T ss_pred             h
Confidence            4

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A

Probab=98.61  E-value=5.1e-09  Score=100.60  Aligned_cols=117  Identities=12%  Similarity=0.070  Sum_probs=90.3

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHH-HHHHcCCCCCceeehHHHHHHHhc----cC
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKD-LWVQADIDGNGVVDYKEFQQRIWK----TT  376 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~-~~~~~D~~~~g~i~~~EF~~~~~~----~~  376 (447)
                      ....+..+|..+|.|++ |+|+.+||+.+|  +|     ..++.+++.. ++..+|.|+||.|+|+||+..+..    ..
T Consensus       186 ~~~~l~~~F~~~D~d~d-G~Is~~El~~~l--~g-----~~~~~~ei~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~l~~  257 (323)
T 1ij5_A          186 DLAALVADFRKIDTNSN-GTLSRKEFREHF--VR-----LGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLLVLRI  257 (323)
T ss_dssp             HHHTSCCCHHHHCTTCC-SEECHHHHHHHH--HH-----TTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCC-CcCcHHHHHHHH--cC-----CCCCHHHHHHHHHHHhcCCCCCEEeHHHHHHHHHHHHHHHH
Confidence            34567788999999999 999999999999  78     7789999999 999999999999999999976632    44


Q ss_pred             cccccccCCCcccccccccccc-cccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          377 WSDQRNDLNDEDEDGFVKSSLE-QTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                      .+...|.+..|.+...|..... ..+|..++..     ++..  ....+|.+.+|.|+
T Consensus       258 ~F~~~D~d~dG~Is~~El~~~l~~~~g~~ls~~-----e~~~--l~~~~D~d~dG~Is  308 (323)
T 1ij5_A          258 LYAFADFDKSGQLSKEEVQKVLEDAHIPESARK-----KFEH--QFSVVDVDDSKSLS  308 (323)
T ss_dssp             HHHHTCSSSCSSEEHHHHHHHHHHTTCCGGGCS-----THHH--HHHHHTTTTCSEEC
T ss_pred             HHHHhCCCCCCCccHHHHHHHHHHHcCCCCCHH-----HHHH--HHHHHCCCCCCcEe
Confidence            5567788888888887766555 5566433222     2222  34467888888865

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}

Probab=98.60  E-value=7.5e-08  Score=86.39  Aligned_cols=72  Identities=17%  Similarity=0.214  Sum_probs=58.0

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCH-HHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLAD-EETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~-~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ....++.+|+.+|.|++ |+|+.+||+.++..++-.+....++. +.++.+|+.+|.|+||.|+|+||+..+..
T Consensus        91 ~~~~l~~~F~~~D~d~~-G~I~~~E~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~  163 (211)
T 2ggz_A           91 MEQKLKWYFKLYDADGN-GSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMAK  163 (211)
T ss_dssp             HHHHHHHHHHHHCTTCS-SSBCHHHHHHHHHHHTTSSCCCSCTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHT
T ss_pred             hHHHHHHHHHHhcCCCC-CcCcHHHHHHHHHHHHhhcCCccccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHh
Confidence            34578899999999999 99999999999998751000023444 45899999999999999999999987753

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5

Probab=98.59  E-value=3.3e-08  Score=87.09  Aligned_cols=62  Identities=24%  Similarity=0.369  Sum_probs=43.5

Q ss_pred             hHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          305 TETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       305 ~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .+..+|..+|.|++ |.|+..||..++..++     ...++++++.+|+.+|.|++|.|+++||...+
T Consensus        64 ~~~~~f~~~D~d~~-g~i~~~Ef~~~~~~~~-----~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~~  125 (193)
T 1bjf_A           64 FAEHVFRTFDANGD-GTIDFREFIIALSVTS-----RGKLEQKLKWAFSMYDLDGNGYISKAEMLEIV  125 (193)
T ss_dssp             HHHHHHHHHCSSCS-SEEEHHHHHHHHHHHT-----SSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred             HHHHHHHHhCCCCC-CcCcHHHHHHHHHHHc-----CCCHHHHHHHHHhhcCCCCCCeECHHHHHHHH
Confidence            45667777777777 7777777777777666     55666667777777777777777777776554

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A

Probab=98.59  E-value=9e-08  Score=85.38  Aligned_cols=66  Identities=18%  Similarity=0.216  Sum_probs=57.4

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHH----HhccCCCCCCCCHHHHHHHH----HHcCCCCCceeehHHHHHHHhc
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALE----QLNLTGHKHGLADEETKDLW----VQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~----~~g~~~~~~~~~~~~~~~~~----~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ...++.+|+.+|.|++ |+|+.+||+.++.    .+|     ..+++++++.++    +.+|.|+||.|+|+||+..+..
T Consensus       110 ~~~l~~~F~~~D~d~~-G~I~~~E~~~~l~~~~~~~g-----~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~  183 (207)
T 2ehb_A          110 HEKVKFAFKLYDLRQT-GFIEREELKEMVVALLHESE-----LVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSL  183 (207)
T ss_dssp             HHHHHHHHHHHCTTCC-SSEEHHHHHHHHHHHHHHHT-----CCCCHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHHHHHcc-----cccCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence            4568899999999999 9999999999996    457     789998876655    5999999999999999987754

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=98.59  E-value=3.8e-08  Score=100.51  Aligned_cols=64  Identities=17%  Similarity=0.318  Sum_probs=58.2

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ....++.+|+.||+|++ |+|+.+||+.+|...+       +++++++++|+.+|.|+||.|+|+||+.+|.
T Consensus       433 ~~~~~~~~F~~~D~d~d-G~Is~~El~~~l~~~~-------~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~  496 (504)
T 3q5i_A          433 SEERLRRAFNLFDTDKS-GKITKEELANLFGLTS-------ISEKTWNDVLGEADQNKDNMIDFDEFVSMMH  496 (504)
T ss_dssp             CHHHHHHHHHHHCTTCC-SEECHHHHHHHTTCSC-------CCHHHHHHHHHTTCSSCSSSEEHHHHHHHHH
T ss_pred             CHHHHHHHHHHhcCCCC-CcCcHHHHHHHHhhCC-------CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence            45688999999999999 9999999999987655       8999999999999999999999999997664

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}

Probab=98.59  E-value=4.1e-08  Score=87.24  Aligned_cols=67  Identities=21%  Similarity=0.182  Sum_probs=58.8

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHH-------hccCCCCCCCCHHHHHHHHHHcCC-CCCceeehHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQ-------LNLTGHKHGLADEETKDLWVQADI-DGNGVVDYKEFQQRIW  373 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~-------~g~~~~~~~~~~~~~~~~~~~~D~-~~~g~i~~~EF~~~~~  373 (447)
                      ....++.+|+.+|.|++ |+|+.+||+.++..       .|     ...++++++.+++.+|. |+||.|+|+||+..+.
T Consensus       107 ~~~~~~~~F~~~D~d~~-G~I~~~El~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~D~~d~dg~Is~~EF~~~~~  180 (204)
T 3e3r_A          107 REAVIAAAFAKLDRSGD-GVVTVDDLRGVYSGRAHPKVRSG-----EWTEDEVLRRFLDNFDSSEKDGQVTLAEFQDYYS  180 (204)
T ss_dssp             HHHHHHHHHHHHCTTCS-SEECHHHHHHHCCCTTCHHHHTT-----SSCHHHHHHHHHHHHSCSSCCSCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCcCCC-CeEeHHHHHHHHccccCCccccC-----CCChHHHHHHHHHHhhccCCCCcCcHHHHHHHHH
Confidence            34578899999999999 99999999999974       45     66788899999999998 9999999999997664


Q ss_pred             c
Q 013259          374 K  374 (447)
Q Consensus       374 ~  374 (447)
                      .
T Consensus       181 ~  181 (204)
T 3e3r_A          181 G  181 (204)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A

Probab=98.59  E-value=7.8e-09  Score=92.41  Aligned_cols=66  Identities=14%  Similarity=0.164  Sum_probs=57.3

Q ss_pred             hhhhHHHHhhhhcCC-CCCCcccHHHHHHHHHHhccCCCCCC-CCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          302 ASLTETDAFAFLKAD-NDGDYITYSGFCEALEQLNLTGHKHG-LADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~-~~~G~i~~~el~~~l~~~g~~~~~~~-~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ...++..+|..||.+ ++ |.|+.+||..+|..++     .. .+.++++.+|+.+|.|++|.|+|+||+..+.
T Consensus        31 ~~~~i~~~f~~~d~~~~~-G~i~~~ef~~~l~~~~-----~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~   98 (207)
T 2d8n_A           31 SEEELCSWYQSFLKDCPT-GRITQQQFQSIYAKFF-----PDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALH   98 (207)
T ss_dssp             CHHHHHHHHHHHHHHCTT-SEEEHHHHHHHHHHTC-----TTSCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHhhCCC-CCCCHHHHHHHHHHhc-----cCCCcHHHHHHHHHHhcCCCCCeEeHHHHHHHHH
Confidence            456788899999998 79 9999999999999887     43 7788899999999999999999999997663

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A

Probab=98.59  E-value=9.5e-08  Score=83.82  Aligned_cols=72  Identities=15%  Similarity=0.270  Sum_probs=59.2

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh----ccC---CCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL----NLT---GHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~----g~~---~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ....++.+|+.+|.|++ |+|+.+||..++..+    |..   ......++++++.+|+.+|.|+||.|+|+||+..+..
T Consensus        97 ~~~~~~~~f~~~D~d~~-G~i~~~ef~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~  175 (190)
T 1fpw_A           97 LEEKLSWAFELYDLNHD-GYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKV  175 (190)
T ss_dssp             STHHHHHHHHHHCSSCS-SEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHHHHHS
T ss_pred             cHHHHHHHHHHhcCCCC-CcCcHHHHHHHHHHHHHHhccccCcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence            45678899999999999 999999999999873    410   0012367889999999999999999999999977754

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A

Probab=98.58  E-value=3.4e-08  Score=80.98  Aligned_cols=58  Identities=16%  Similarity=0.244  Sum_probs=52.5

Q ss_pred             hHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          305 TETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       305 ~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .++.+|+.+|.|++ |+|+.+||+.++..+|     ..+    +..++..+|.|++|.|+|+||++.+
T Consensus        76 ~~~~~f~~~D~d~~-G~i~~~e~~~~l~~~~-----~~~----~~~~~~~~D~~~dg~i~~~ef~~~l  133 (134)
T 1jfj_A           76 GLKVLYKLMDVDGD-GKLTKEEVTSFFKKHG-----IEK----VAEQVMKADANGDGYITLEEFLEFS  133 (134)
T ss_dssp             HHHHHHHHHCCSSS-SEEEHHHHHHHHTTTT-----CHH----HHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred             HHHHHHHHHCCCCC-CccCHHHHHHHHHHhC-----HHH----HHHHHHHhCCCCCCcEeHHHHHHHh
Confidence            48899999999999 9999999999999887     332    8999999999999999999999765

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5

Probab=98.58  E-value=9.6e-08  Score=85.03  Aligned_cols=73  Identities=15%  Similarity=0.242  Sum_probs=58.7

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh----ccCCC--------CCCCCHHHHHHHHHHcCCCCCceeehHHH
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQL----NLTGH--------KHGLADEETKDLWVQADIDGNGVVDYKEF  368 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~----g~~~~--------~~~~~~~~~~~~~~~~D~~~~g~i~~~EF  368 (447)
                      .....++.+|+.+|.|++ |+|+.+||..++..+    |....        ....++++++.+|+.+|.|+||.|+|+||
T Consensus        92 ~~~~~~~~~F~~~D~d~~-G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef  170 (204)
T 1jba_A           92 TLEHKLKWTFKIYDKDRN-GCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEF  170 (204)
T ss_dssp             CCTHHHHHHHHHHCSSCS-SCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHH
T ss_pred             CHHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHHHHHhCCCCccccccccCchhhHHHHHHHHHHHhCCCCCCeEcHHHH
Confidence            345678999999999999 999999999999876    31000        01155678999999999999999999999


Q ss_pred             HHHHhc
Q 013259          369 QQRIWK  374 (447)
Q Consensus       369 ~~~~~~  374 (447)
                      +..+..
T Consensus       171 ~~~~~~  176 (204)
T 1jba_A          171 VEGARR  176 (204)
T ss_dssp             HHHHTT
T ss_pred             HHHHHc
Confidence            977743

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}

Probab=98.57  E-value=1.1e-07  Score=84.23  Aligned_cols=71  Identities=15%  Similarity=0.273  Sum_probs=57.2

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhcc-CCCCCCCCH-HHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNL-TGHKHGLAD-EETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~-~~~~~~~~~-~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ....++.+|+.+|.|++ |+|+.+||..++..++- .+....++. +.++.+|+.+|.|+||.|+|+||+..+.
T Consensus        86 ~~~~~~~~F~~~D~d~~-G~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~  158 (198)
T 2r2i_A           86 VDQKLRWYFKLYDVDGN-GCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQ  158 (198)
T ss_dssp             HHHHHHHHHHHHCTTCS-SCEEHHHHHHHHHHTTGGGGSSSCCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred             hHHHHHHHHHHhcCCCC-CcCcHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            34578899999999999 99999999999998740 000123454 4489999999999999999999997764

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A

Probab=98.57  E-value=2.3e-08  Score=83.89  Aligned_cols=94  Identities=9%  Similarity=0.048  Sum_probs=75.1

Q ss_pred             hhhhhHHHHhhhhcCCC-CCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhcc----
Q 013259          301 RASLTETDAFAFLKADN-DGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT----  375 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~-~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~----  375 (447)
                      .....++++|..+|.|+ + |+|+.+||+.+|+.+|     ..++..+++.++..+|.+    |+|+||+..+...    
T Consensus        11 ~~~~~l~~~F~~~D~d~~~-G~i~~~el~~~l~~~g-----~~~~~~~~~~l~~~~d~~----i~~~eF~~~~~~~~~~~   80 (146)
T 2qac_A           11 EEKVDESDVRIYFNEKSSG-GKISIDNASYNARKLG-----LAPSSIDEKKIKELYGDN----LTYEQYLEYLSICVHDK   80 (146)
T ss_dssp             HHHSCHHHHHHHHHHHCBT-TBEEHHHHHHHHHHTT-----CCCCHHHHHHHHHHHCSE----ECHHHHHHHHHHTCCTT
T ss_pred             HHHHHHHHHHHHhCccCCC-CcccHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCC----CCHHHHHHHHHHHhcCc
Confidence            45668999999999999 9 9999999999999999     889999999999999987    9999999766432    


Q ss_pred             -------CcccccccCCCcccccccccccccccceE
Q 013259          376 -------TWSDQRNDLNDEDEDGFVKSSLEQTIGFS  404 (447)
Q Consensus       376 -------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  404 (447)
                             ..+...|.+..|.+...|.......+|..
T Consensus        81 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~  116 (146)
T 2qac_A           81 DNVEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDA  116 (146)
T ss_dssp             CCHHHHHHHHHTTCTTCSSEEEHHHHHHHHHHSSSC
T ss_pred             chHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhCCC
Confidence                   22345566677777776665555555543

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A

Probab=98.57  E-value=5.7e-08  Score=93.27  Aligned_cols=63  Identities=16%  Similarity=0.219  Sum_probs=59.3

Q ss_pred             hHHHHhhhhcCCCCCCcccHHHHHHHH-HHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          305 TETDAFAFLKADNDGDYITYSGFCEAL-EQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       305 ~l~~~F~~~D~~~~~G~i~~~el~~~l-~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      .+..+|+.||.|++ |+|+.+||+.+| ..+|     ..++++++..+|..+|.|+||.|+|+||+..|.
T Consensus       254 ~l~~~F~~~D~d~d-G~Is~~El~~~l~~~~g-----~~ls~~e~~~l~~~~D~d~dG~Is~~EF~~~~~  317 (323)
T 1ij5_A          254 VLRILYAFADFDKS-GQLSKEEVQKVLEDAHI-----PESARKKFEHQFSVVDVDDSKSLSYQEFVMLVL  317 (323)
T ss_dssp             HHHHHHHHTCSSSC-SSEEHHHHHHHHHHTTC-----CGGGCSTHHHHHHHHTTTTCSEECHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCC-CCccHHHHHHHHHHHcC-----CCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHH
Confidence            78899999999999 999999999999 9888     778999999999999999999999999997764

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5

Probab=98.56  E-value=1.2e-08  Score=92.66  Aligned_cols=125  Identities=13%  Similarity=0.074  Sum_probs=82.8

Q ss_pred             hhhhHHHHhhhhcCC-CCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc------
Q 013259          302 ASLTETDAFAFLKAD-NDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK------  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~-~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~------  374 (447)
                      ...+++++|+.||.+ ++ |.|+.+||+.++..+|.    ...++++++.+|+.+|.|++|.|+|+||+..+..      
T Consensus        49 s~~ei~~l~~~Fd~~d~~-G~I~~~E~~~~l~~l~~----~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~l~~~~~~~~  123 (224)
T 1s1e_A           49 TKRELQVLYRGFKNECPS-GVVNEETFKQIYAQFFP----HGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTV  123 (224)
T ss_dssp             CHHHHHHHHHHHHHHCTT-SCBCHHHHHHHHHTTCT----TSCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHCCH
T ss_pred             CHHHHHHHHHHHHhhCCC-CCCCHHHHHHHHHHhcC----CCCcHHHHHHHHHHhcCCCCCcEeHHHHHHHHHHHccCCH
Confidence            445677788888884 88 99999999999998871    2378899999999999999999999999976632      


Q ss_pred             ----cCcccccccCCCccccccccccccccc----ceEEeccccCC----cccccCCCCCCCCCCCCcceeE
Q 013259          375 ----TTWSDQRNDLNDEDEDGFVKSSLEQTI----GFSVKNAVLFP----PEVEKGRWPENYSLSDHARLTV  434 (447)
Q Consensus       375 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~  434 (447)
                          ...+...|.+..|.++..|.......+    |....+.. ..    ..+..  .-..+|.+.+|.|+.
T Consensus       124 ~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~g~~~~~~~-~~~~~~~~~~~--~f~~~D~d~dG~Is~  192 (224)
T 1s1e_A          124 HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVL-KEDTPRQHVDV--FFQKMDKNKDGIVTL  192 (224)
T ss_dssp             HHHHHHHHHHHCTTCCSEECHHHHHHHHHHHHHHHTTCCCGGG-CSSSHHHHHHH--HHHHHCTTCSSCEEH
T ss_pred             HHHHHHHHHHHcCCCCCeECHHHHHHHHHHHHHHhcccCCCCC-CHhHHHHHHHH--HHHHhCCCCCCcEeH
Confidence                223345566666777666654333332    32211100 00    11111  234678888898763

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}

Probab=98.55  E-value=1.4e-07  Score=82.85  Aligned_cols=72  Identities=14%  Similarity=0.243  Sum_probs=59.1

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHH----hccC---CCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQ----LNLT---GHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~----~g~~---~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ....++.+|+.+|.|++ |+|+.+||..++..    +|..   ......++++++.+|+.+|.|+||.|+|+||+..+..
T Consensus        97 ~~~~~~~~f~~~D~d~~-G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~  175 (190)
T 2l2e_A           97 LNDKLIWAFQLYDLDNN-GLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKR  175 (190)
T ss_dssp             SHHHHHHHHHHHCTTSC-SCBCHHHHHHHHHHHHHHHHHHSCCCSSCCCTHHHHHHHHHHHTCCSSCCBCHHHHHHHHHT
T ss_pred             HHHHHHHHHhHccCCCC-CcCcHHHHHHHHHHHHHHhccccCcccccccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence            34578889999999999 99999999999987    2310   0013578899999999999999999999999977644

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A

Probab=98.55  E-value=2.4e-08  Score=92.95  Aligned_cols=91  Identities=12%  Similarity=0.117  Sum_probs=71.2

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHH----HhccCCCCC--CCCHHHHHHHH----HHcCCCCCceeehHHHHHH
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALE----QLNLTGHKH--GLADEETKDLW----VQADIDGNGVVDYKEFQQR  371 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~----~~g~~~~~~--~~~~~~~~~~~----~~~D~~~~g~i~~~EF~~~  371 (447)
                      ....++++|..+|.|++ |+|+.+||+.+|+    .+|     .  .+++++++.++    ..+|.|++|.|+|+||+..
T Consensus         9 ~~~~l~~~F~~~D~d~~-G~i~~~El~~~l~~~~~~lg-----~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~   82 (272)
T 2be4_A            9 DAAGFLQIWQHFDADDN-GYIEGKELDDFFRHMLKKLQ-----PKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANM   82 (272)
T ss_dssp             CHHHHHHHHHHHCTTCC-SEEEGGGHHHHHHHHHHHHS-----TTSCCCHHHHHHHHHHHSCHHHHTCCSEEEHHHHHHH
T ss_pred             CHHHHHHHHHHhcCCCC-CCcCHHHHHHHHHHHHHhcC-----CCCCCCHHHHHHHHHHHHHHhcCCCCCcEeHHHHHHH
Confidence            34578999999999999 9999999999999    888     6  78999988754    7889999999999999977


Q ss_pred             Hhc---------------------cCcccccccCCCcccccccccccc
Q 013259          372 IWK---------------------TTWSDQRNDLNDEDEDGFVKSSLE  398 (447)
Q Consensus       372 ~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~  398 (447)
                      +..                     ...+...|.+..|.++..|.....
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l  130 (272)
T 2be4_A           83 ILPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAELKNFL  130 (272)
T ss_dssp             HSCHHHHHHHHHHHHSCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHH
T ss_pred             HhhhhHHHHHHHhhccCcccHHHHHHHHHHhCCCCCCccCHHHHHHHH
Confidence            421                     122345566667777666654333

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*

Probab=98.53  E-value=4e-08  Score=83.02  Aligned_cols=115  Identities=18%  Similarity=0.176  Sum_probs=78.0

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhcc------
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT------  375 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~------  375 (447)
                      ....++++|..+|.|++ |+|+.+|| ..|..++     ...   +++.++..+|.|++|.|+|+||+..+...      
T Consensus         4 ~~~~l~~~F~~~D~d~~-G~i~~~el-~~l~~~~-----~~~---~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~   73 (155)
T 3ll8_B            4 EIKRLGKRFKKLDLDNS-GSLSVEEF-MSLPELQ-----QNP---LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDK   73 (155)
T ss_dssp             HHHHHHHHHHHHCTTCS-SSBCHHHH-TTSGGGT-----TCT---THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCH
T ss_pred             HHHHHHHHHHHhCcCCC-CeEcHHHH-HHhhccc-----cch---HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCH
Confidence            45678999999999999 99999999 6666666     332   78899999999999999999999776432      


Q ss_pred             -----CcccccccCCCcccccccccccccc-cceEEeccccCCcccccCCCCCC----CCCCCCccee
Q 013259          376 -----TWSDQRNDLNDEDEDGFVKSSLEQT-IGFSVKNAVLFPPEVEKGRWPEN----YSLSDHARLT  433 (447)
Q Consensus       376 -----~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~  433 (447)
                           ..+...|.+..|.+...|....... .|..++...     +..  ....    +|.+.+|.|+
T Consensus        74 ~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~-----~~~--~~~~~~~~~D~~~dg~i~  134 (155)
T 3ll8_B           74 EQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQ-----LQQ--IVDKTIINADKDGDGRIS  134 (155)
T ss_dssp             HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHGGGSCHHH-----HHH--HHHHHHHHHCTTSSSSBC
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccCCCHHH-----HHH--HHHHHHHHhCCCCCCcCc
Confidence                 1223456666666666665443333 233222221     111  2223    6778888775

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}

Probab=98.53  E-value=1.9e-07  Score=86.43  Aligned_cols=73  Identities=18%  Similarity=0.225  Sum_probs=59.7

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh----ccCCC---CCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQL----NLTGH---KHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~----g~~~~---~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      .....++.+|+.+|.|++ |+|+.+||..++..+    |....   ....++++++.+|+.+|.|+||.|+|+||+..+.
T Consensus       162 ~~~~~l~~~F~~~D~d~d-G~I~~~Ef~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~  240 (256)
T 2jul_A          162 TVHEKLKWAFNLYDINKD-GCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQ  240 (256)
T ss_dssp             CHHHHHHHHHHHTCCSSS-SCBCHHHHHHHHHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSCCSTTCSBCHHHHHHHHH
T ss_pred             ChHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHHHHHhCCCCCcccchhhHHHHHHHHHHHHCCCCCCcEeHHHHHHHHH
Confidence            345678899999999999 999999999999876    41000   0234788999999999999999999999997764


Q ss_pred             c
Q 013259          374 K  374 (447)
Q Consensus       374 ~  374 (447)
                      .
T Consensus       241 ~  241 (256)
T 2jul_A          241 K  241 (256)
T ss_dssp             H
T ss_pred             h
Confidence            3

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=98.52  E-value=6.1e-08  Score=98.73  Aligned_cols=64  Identities=20%  Similarity=0.266  Sum_probs=56.6

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ....++.+|+.||+|++ |+|+.+||+.+|...       .+++++++++|+.+|.|+||.|+|+||+.+|.
T Consensus       424 ~~~~~~~~F~~~D~d~~-G~Is~~El~~~l~~~-------~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~  487 (494)
T 3lij_A          424 SKDKLESAFQKFDQDGN-GKISVDELASVFGLD-------HLESKTWKEMISGIDSNNDGDVDFEEFCKMIQ  487 (494)
T ss_dssp             CHHHHHHHHHHHCTTCS-SEECHHHHHHHC-CC-------SCCCHHHHHHHHTTCSSSSSSEEHHHHHHHHH
T ss_pred             cHHHHHHHHHHHCCCCC-CcCCHHHHHHHHHhc-------CCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHH
Confidence            45678999999999999 999999999998653       48889999999999999999999999997664

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}

Probab=98.51  E-value=1.3e-07  Score=83.07  Aligned_cols=65  Identities=25%  Similarity=0.383  Sum_probs=58.8

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ...+..+|+.+|.|++ |.|+.+||..++..++     ...+.++++.+|+.+|.|++|.|+++||...+.
T Consensus        62 ~~~~~~~f~~~D~d~~-G~i~~~ef~~~~~~~~-----~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~  126 (190)
T 2l2e_A           62 SAFAEYVFNVFDADKN-GYIDFKEFICALSVTS-----RGELNDKLIWAFQLYDLDNNGLISYDEMLRIVD  126 (190)
T ss_dssp             HHHHHHHHHHHCSSST-TCEEHHHHHHHHTTSS-----CSCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHH
T ss_pred             cHHHHHHHHHhcCCCC-CeEeHHHHHHHHHHHc-----CCCHHHHHHHHHhHccCCCCCcCcHHHHHHHHH
Confidence            4568889999999999 9999999999998888     778899999999999999999999999997663

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=98.51  E-value=1.7e-08  Score=102.66  Aligned_cols=65  Identities=22%  Similarity=0.325  Sum_probs=36.6

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ...++.+|+.||+|++ |+|+.+||+.+|..+|     ..+++++++.+|+.+|.|+||.|+|+||+++|.
T Consensus       416 ~~~~~~~F~~~D~d~d-G~Is~~El~~~l~~~g-----~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~  480 (486)
T 3mwu_A          416 RERMERAFKMFDKDGS-GKISTKELFKLFSQAD-----SSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQ  480 (486)
T ss_dssp             HHHHHHHHHHHCSSCS-SSBCSSCC-------------------------CCCCSSCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCC-CcCCHHHHHHHHHHcC-----CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence            3567788888888888 8888888888888888     778888888888888888888888888886553

>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}

Probab=98.50  E-value=4.3e-09  Score=95.25  Aligned_cols=121  Identities=12%  Similarity=0.101  Sum_probs=83.0

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHH-hccCCCCCCCCHHHHHHHHHHc---------CCCCCceeehHHHH
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQ-LNLTGHKHGLADEETKDLWVQA---------DIDGNGVVDYKEFQ  369 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~~~~~~~~---------D~~~~g~i~~~EF~  369 (447)
                      ......++++|..+|.|++ |+|+.+||+.+|.. +|     ..++.+++..++..+         |.|++|.|+|+||+
T Consensus        44 ~~~~~~l~~~F~~~D~d~d-G~I~~~El~~~l~~~lg-----~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~I~~~EF~  117 (219)
T 3cs1_A           44 AEAKQRRIELFKKFDKNET-GKLCYDEVYSGCLEVLK-----LDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFL  117 (219)
T ss_dssp             HHHHHHHHHHHHHHCTTCS-SCBCHHHHHHHHHHTTC-----GGGTCSCHHHHHHHHHHHHHHHHHHHHTSCCCSSBCHH
T ss_pred             HHHHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHHhC-----CCccHHHHHHHHHHHHHHHHhhhhccCCCCcCCHHHHH
Confidence            3456789999999999999 99999999999988 78     556666676665433         34788999999998


Q ss_pred             HHHh----------ccCcccccccCCCcccccccccccccccce-EEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          370 QRIW----------KTTWSDQRNDLNDEDEDGFVKSSLEQTIGF-SVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       370 ~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                      ..+.          ....+...|.+..|.+...|.......+|. .++.     .++..  ....+|.+.+|.|+
T Consensus       118 ~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~-----~e~~~--l~~~~D~d~dG~I~  185 (219)
T 3cs1_A          118 EFRLMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKV-----EDPAA--LFKELDKNGTGSVT  185 (219)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHHHHHTCCC-----SCHHH--HHHHHCTTSSSEEE
T ss_pred             HHHHHHhccchHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhcccCCCH-----HHHHH--HHHHhCCCCCCcEe
Confidence            6542          133445667777777777776555544443 2222     22222  23456778888765

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A

Probab=98.49  E-value=2e-07  Score=81.69  Aligned_cols=65  Identities=17%  Similarity=0.336  Sum_probs=59.0

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ...+..+|..+|.|++ |.|+.+||..++..++     ...++++++.+|+.+|.|++|.|+++||...+.
T Consensus        62 ~~~~~~~f~~~D~d~~-G~i~~~ef~~~~~~~~-----~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~  126 (190)
T 1fpw_A           62 EDFANHLFTVFDKDNN-GFIHFEEFITVLSTTS-----RGTLEEKLSWAFELYDLNHDGYITFDEMLTIVA  126 (190)
T ss_dssp             SHHHHHHHHTCCSSCS-SEECHHHHHHHHHHHS-----CCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCC-CcEeHHHHHHHHHHHc-----cCCcHHHHHHHHHHhcCCCCCcCcHHHHHHHHH
Confidence            4468889999999999 9999999999999988     778889999999999999999999999997664

>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L

Probab=98.49  E-value=1.6e-07  Score=99.58  Aligned_cols=84  Identities=12%  Similarity=0.085  Sum_probs=71.1

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc----cCccc
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTWSD  379 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~----~~~~~  379 (447)
                      ..++.+|+.||+|++ |+|+.+||+.+|..+|     ..+++++++.++..+| |+||.|+|+||+..|..    ...+.
T Consensus       605 ~~l~~~F~~~D~d~d-G~Is~~El~~~L~~~G-----~~ls~~~~~~l~~~~D-d~dG~Isf~EF~~~l~~~~~l~~~F~  677 (714)
T 3bow_A          605 QKYQKIYREIDVDRS-GTMNSYEMRKALEEAG-----FKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVRLEILFKIFK  677 (714)
T ss_dssp             HHHHHHHHHHCTTCC-SSEEHHHHHHHHHHTT-----EECCHHHHHHHHHHHS-CTTCEECHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHhCCCCC-CeECHHHHHHHHHHcC-----CCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHHHHHHHHHHH
Confidence            678999999999999 9999999999999999     7799999999999999 99999999999977743    23445


Q ss_pred             ccccCCCcccccccc
Q 013259          380 QRNDLNDEDEDGFVK  394 (447)
Q Consensus       380 ~~~~~~~~~~~~~~~  394 (447)
                      ..|.+..|.+...|.
T Consensus       678 ~~D~d~dG~Is~~el  692 (714)
T 3bow_A          678 QLDPENTGTIQLDLI  692 (714)
T ss_dssp             SSCSSCCSEEEEEHH
T ss_pred             HhCCCCCCcEEHHHH
Confidence            666666666655443

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A

Probab=98.48  E-value=1.8e-08  Score=90.25  Aligned_cols=65  Identities=11%  Similarity=0.135  Sum_probs=54.3

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ......++++|..+|.|++ |+|+.+||+.++ .+|     ..++.   +.++..+|.+++|.|+|+||+..+..
T Consensus        25 ~~~~~~l~~~F~~~D~d~d-G~Is~~El~~~~-~lg-----~~~~~---~~l~~~~d~~~~g~i~~~EF~~~~~~   89 (208)
T 2ct9_A           25 HSQITRLYSRFTSLDKGEN-GTLSREDFQRIP-ELA-----INPLG---DRIINAFFSEGEDQVNFRGFMRTLAH   89 (208)
T ss_dssp             HHHHHHHHHHHHHHCTTCS-SEECTGGGGGCH-HHH-----TSTTH---HHHHHTTSCTTCSCEEHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHCCCCC-CcCcHHHHHHHH-HcC-----CCCcH---HHHHHHHcCCCCCcCcHHHHHHHHHh
Confidence            4456789999999999999 999999999965 677     44543   46889999999999999999976643

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5

Probab=98.47  E-value=1.1e-07  Score=83.65  Aligned_cols=89  Identities=11%  Similarity=0.032  Sum_probs=69.2

Q ss_pred             hhhhhHHHHhhhhcCC-CCCCcccHHHHHHHHHHhccCCCCCC-CCHHHHHHHHHHcCCCCCceeehHHHHHHHhcc---
Q 013259          301 RASLTETDAFAFLKAD-NDGDYITYSGFCEALEQLNLTGHKHG-LADEETKDLWVQADIDGNGVVDYKEFQQRIWKT---  375 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~-~~~G~i~~~el~~~l~~~g~~~~~~~-~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~---  375 (447)
                      -...+++++|..||.+ ++ |+|+.+||+.+|..++     .. .+.++++.+|..+|.|++|.|+|+||+..+...   
T Consensus        22 ~~~~~i~~~f~~fd~~~~~-G~i~~~e~~~~l~~~~-----~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~   95 (193)
T 1bjf_A           22 FTEHEIQEWYKGFLRDCPS-GHLSMEEFKKIYGNFF-----PYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRG   95 (193)
T ss_dssp             CCHHHHHHHHHHHHHHSTT-SEEEHHHHHHHHTTTS-----SSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSS
T ss_pred             CCHHHHHHHHHHHHHHCCC-CCcCHHHHHHHHHHhc-----CcCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCC
Confidence            3456788999999998 89 9999999999999887     43 357789999999999999999999999766321   


Q ss_pred             -------CcccccccCCCccccccccc
Q 013259          376 -------TWSDQRNDLNDEDEDGFVKS  395 (447)
Q Consensus       376 -------~~~~~~~~~~~~~~~~~~~~  395 (447)
                             ..+...|.+..|.++..|..
T Consensus        96 ~~~~~~~~~f~~~D~d~~G~I~~~E~~  122 (193)
T 1bjf_A           96 KLEQKLKWAFSMYDLDGNGYISKAEML  122 (193)
T ss_dssp             CHHHHHHHHHHHHCTTCSSCEEHHHHH
T ss_pred             CHHHHHHHHHhhcCCCCCCeECHHHHH
Confidence                   22344556666666655543

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A

Probab=98.47  E-value=1.2e-07  Score=83.21  Aligned_cols=90  Identities=13%  Similarity=0.036  Sum_probs=67.7

Q ss_pred             hhhhHHHHhhhhcCC-CCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc------
Q 013259          302 ASLTETDAFAFLKAD-NDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK------  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~-~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~------  374 (447)
                      ...+++++|+.||.+ ++ |+|+.+||+.+|..++-    ...+..+++.++..+|.|++|.|+|+||+..+..      
T Consensus        23 ~~~~i~~~f~~fd~~~~~-G~i~~~e~~~~l~~~~~----~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~   97 (190)
T 1g8i_A           23 TEKEVQQWYKGFIKDCPS-GQLDAAGFQKIYKQFFP----FGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTL   97 (190)
T ss_dssp             CHHHHHHHHHHHHHHCTT-SEEEHHHHHHHHHHHCT----TSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCH
T ss_pred             CHHHHHHHHHHHHHhCCC-CcCCHHHHHHHHHHhCC----CCChHHHHHHHHHHHhcCCCCeEeHHHHHHHHHHhcCCCH
Confidence            456788899999988 88 99999999999998730    2366788999999999999999999999866532      


Q ss_pred             ----cCcccccccCCCcccccccccc
Q 013259          375 ----TTWSDQRNDLNDEDEDGFVKSS  396 (447)
Q Consensus       375 ----~~~~~~~~~~~~~~~~~~~~~~  396 (447)
                          ...+...|.+..|.++..|...
T Consensus        98 ~~~~~~~f~~~D~d~~G~i~~~e~~~  123 (190)
T 1g8i_A           98 DEKLRWAFKLYDLDNDGYITRNEMLD  123 (190)
T ss_dssp             HHHHHHHHHHHCTTCSSEEEHHHHHH
T ss_pred             HHHHHHHHHhhcCCCCCeECHHHHHH
Confidence                2233455666666666666543

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}

Probab=98.44  E-value=3.1e-07  Score=81.26  Aligned_cols=64  Identities=25%  Similarity=0.391  Sum_probs=57.8

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ..+..+|..+|.|++ |.|+..||..++..++     ...+.++++.+|+.+|.|++|.|+++||...+.
T Consensus        52 ~~~~~~f~~~D~d~~-G~I~~~Ef~~~~~~~~-----~~~~~~~~~~~F~~~D~d~~G~I~~~Ef~~~~~  115 (198)
T 2r2i_A           52 KYVEQMFETFDFNKD-GYIDFMEYVAALSLVL-----KGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIK  115 (198)
T ss_dssp             HHHHHHHHHHCTTCS-SCEEHHHHHHHHHHHS-----SCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCC-CeEcHHHHHHHHHHHc-----cCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHH
Confidence            458889999999999 9999999999999988     677888999999999999999999999997664

>4a9c_A Phosphatidylinositol-3,4,5-trisphosphate 5-phosph; SGC, signalling, structural genomics consortium stockholm, magnesium binding, hydrolase; HET: B5F; 2.10A {Homo sapiens} PDB: 3nr8_B*

Probab=98.43  E-value=4.6e-07  Score=85.48  Aligned_cols=134  Identities=17%  Similarity=0.091  Sum_probs=74.0

Q ss_pred             CCcEE--EEcccccChhhHHHHHHHHhhh---cCCcEEEecCCCCCCceEEEEEecCCceEeeeEEEEecCC------CC
Q 013259           76 RSSII--CLQEFWVGNEELVDMYEKRLSD---AGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDF------GD  144 (447)
Q Consensus        76 ~~DII--~LQEv~~~~~~~~~~l~~~l~~---~gy~~~~~~~~~~~~~G~ai~~rs~~~~i~~~~~~~~~~~------~~  144 (447)
                      .|||+  +|||+......+...+...|..   ..|..+..  ..-.+..++||+|....+-+.......-..      ++
T Consensus        47 ~~DiyviG~QE~~~~~~~W~~~i~~~L~~~~~~~Y~~v~s--~~L~gi~l~Vfvk~~~~~~I~~v~~~~v~tG~~g~~GN  124 (316)
T 4a9c_A           47 PHDIYVFGTQENSVGDREWLDLLRGGLKELTDLDYRPIAM--QSLWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLGN  124 (316)
T ss_dssp             CCSEEEEEEESCCSCHHHHHHHHHHHHHHHHSCCCEEEEE--EEETTEEEEEEECGGGGGGEEEEEEEEEEEC------C
T ss_pred             CCcEEEEeccccccchhHHHHHHHHHhccccCCCEEEEEe--eeehheeeeeEEeHHHhhhCcccccceeeeeeeEecCC
Confidence            47876  9999965556677777777764   34554432  223456788888776433222111111111      11


Q ss_pred             chhhhhhhcccccccccccCCCCCeEEEEEecccCCCCCCCchhhHHHHHHHHHHHH---HHHHHcC--CCCCcEEEeec
Q 013259          145 RVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVE---SYQKEHN--LKPIPIILCGD  219 (447)
Q Consensus       145 ~~~~~~~l~~~~~~~~~~~~~~g~~l~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~---~~~~~~~--~~~~pvIl~GD  219 (447)
                      +.+..           .+....+..|+++|+||.++.  .....|..+...|++.+.   ......+  .....++++||
T Consensus       125 KGaV~-----------ir~~~~~ts~~FVn~HLaAg~--~~~~~Rn~d~~~I~~~l~f~~~~~~~~d~~~~~d~vfw~GD  191 (316)
T 4a9c_A          125 KGAVG-----------VSFMFNGTSFGFVNCHLTSGN--EKTARRNQNYLDILRLLSLGDRQLNAFDISLRFTHLFWFGD  191 (316)
T ss_dssp             EEEEE-----------EEEEETTEEEEEEEEECCCST--TCHHHHHHHHHHHHHHCCC-------CCTTTTSSEEEEEEE
T ss_pred             CceEE-----------EEEEECCcEEEEEEeccccCc--hHHHHHHHHHHHHHHhCCCCCCCcCccccCCcCCeEEEcCC
Confidence            11111           222335688999999998754  345667777777765432   0000000  01124899999


Q ss_pred             CCCcc
Q 013259          220 WNGSK  224 (447)
Q Consensus       220 FN~~p  224 (447)
                      ||---
T Consensus       192 LNyRi  196 (316)
T 4a9c_A          192 LNYRL  196 (316)
T ss_dssp             CCCCB
T ss_pred             ccCCc
Confidence            99753

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A

Probab=98.41  E-value=6.6e-09  Score=91.03  Aligned_cols=119  Identities=8%  Similarity=0.051  Sum_probs=79.9

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh------ccCCCCCCCCHHHHHHHH---------HHcCCCCCceee
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQL------NLTGHKHGLADEETKDLW---------VQADIDGNGVVD  364 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~------g~~~~~~~~~~~~~~~~~---------~~~D~~~~g~i~  364 (447)
                      ......++++|..+|+|++ |+|+.+||+.+|+.+      |     ..++.++++.++         +.+|.|++|.|+
T Consensus        10 ~~~~~~l~~~F~~~D~d~d-G~i~~~El~~~l~~~~~~~~~g-----~~~~~~~~~~l~~~~~~~~~f~~~D~d~dg~I~   83 (186)
T 2hps_A           10 AYHLRKMKTRMQRVDVTGD-GFISREDYELIAVRIAKIAKLS-----AEKAEETRQEFLRVADQLGLAPGVRISVEEAAV   83 (186)
T ss_dssp             HHHHHHHHHHHHTTCTTCS-SEEEHHHHHHHHHHHHHHHTCC-----HHHHHHHHHHHHHHHHHHTCCTTCEEEHHHHHH
T ss_pred             HHHHHHHHHHhhhcCCCCC-CccCHHHHHHHHHHHHHHHHcC-----CCCCcHHHHHHHHHHHHHHHHHhcCCCCCCccc
Confidence            3456789999999999999 999999999999876      7     668888899885         999999999999


Q ss_pred             hHHHHHHHhccC-------------cccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCcc
Q 013259          365 YKEFQQRIWKTT-------------WSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHAR  431 (447)
Q Consensus       365 ~~EF~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  431 (447)
                      |+|  ..+....             +....|.+..|.+...|........|..++.     .++..  ....+|.+.+|.
T Consensus        84 ~~E--~~~~~~~~~~~~~~~~~~~f~~~~fD~d~~G~I~~~E~~~~l~~~g~~~~~-----~~~~~--~~~~~D~d~dG~  154 (186)
T 2hps_A           84 NAT--DSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTD-----DKAIT--CFNTLDFNKNGQ  154 (186)
T ss_dssp             HHH--HHHHHCCTHHHHHTTHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHCTTCCH-----HHHHH--HHHHHCTTCSSE
T ss_pred             HHH--HHHHHhcCChHHHHHHHHHHHHHHccCCCCCcCCHHHHHHHHHHhCCCCCH-----HHHHH--HHHHHcCCCCCc
Confidence            999  2332111             1122244555555555544433333321111     11111  234678888888


Q ss_pred             ee
Q 013259          432 LT  433 (447)
Q Consensus       432 l~  433 (447)
                      |+
T Consensus       155 i~  156 (186)
T 2hps_A          155 IS  156 (186)
T ss_dssp             EE
T ss_pred             Cc
Confidence            75

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A

Probab=98.40  E-value=2.8e-07  Score=82.18  Aligned_cols=66  Identities=17%  Similarity=0.298  Sum_probs=60.0

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ....+..+|+.+|.|++ |.|+.+||..++..++     ...++++++.+|+.+|.|++|.|+++||...+.
T Consensus        69 ~~~~~~~~f~~~D~d~~-G~i~~~Ef~~~~~~~~-----~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~l~  134 (207)
T 2d8n_A           69 PKAYAQHVFRSFDSNLD-GTLDFKEYVIALHMTT-----AGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVM  134 (207)
T ss_dssp             CHHHHHHHHHHHCTTCC-SEEEHHHHHHHHHHHS-----CSSSSTTHHHHHHHHCTTCSSEECHHHHHHHHH
T ss_pred             cHHHHHHHHHHhcCCCC-CeEeHHHHHHHHHHHc-----CCCHHHHHHHHHHHhcCCCCCeEcHHHHHHHHH
Confidence            34568899999999999 9999999999999988     678888999999999999999999999997663

>3mtc_A Type II inositol-1,4,5-trisphosphate 5-phosphatas; INPP5BA,phosphoinositide 5-phosphatase, inositol signalling, phosphatase, magnesium; HET: PIF; 2.40A {Homo sapiens} PDB: 3n9v_A

Probab=98.40  E-value=6.9e-07  Score=84.04  Aligned_cols=165  Identities=19%  Similarity=0.120  Sum_probs=82.6

Q ss_pred             ceeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhh--CCCc--EEEEcccccCh-----------hhHH
Q 013259           29 CITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLY--ERSS--IICLQEFWVGN-----------EELV   93 (447)
Q Consensus        29 ~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~--~~~D--II~LQEv~~~~-----------~~~~   93 (447)
                      .+.|.||||.+..            ..          +.+.++|..  ..||  ||||||+....           ..+.
T Consensus         9 ~i~v~TwNvng~~------------~~----------~~l~~wL~~~~~~pDI~viGlQE~~l~~~~~~~~~~~~~~~W~   66 (313)
T 3mtc_A            9 RFFAGTYNVNGQS------------PK----------ECLRLWLSNGIQAPDVYCVGFQELDLSKEAFFFHDTPKEEEWF   66 (313)
T ss_dssp             EEEEEEEECTTCC------------CC----------SCTHHHHSSSCCCCSEEEEEEECSCCSHHHHTTCCCHHHHHHH
T ss_pred             EEEEEEEEcCCcc------------Cc----------hhHHHHhcccCCCCCeEEEEEEecccchhhhcccCcchHHHHH
Confidence            5788999999631            00          124455654  5799  79999995321           2344


Q ss_pred             HHHHHHhhh-cCCcEEEecCCCCCCceEEEEEecCCceEeeeEEEEecCCCCchhhhhhhcccccccccccCCCCCeEEE
Q 013259           94 DMYEKRLSD-AGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILI  172 (447)
Q Consensus        94 ~~l~~~l~~-~gy~~~~~~~~~~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~v  172 (447)
                      ..+...|.. ..|.....  ..-.+.-+.|++|.+..+-+.......-..+ -.+.......    +..+....+..+++
T Consensus        67 ~~i~~~L~~~~~Y~~v~s--~~lvGl~l~Vfvr~~~~~~i~~v~~~~v~tG-~~g~~GNKGa----V~ir~~~~~ts~cF  139 (313)
T 3mtc_A           67 KAVSEGLHPDAKYAKVKL--IRLVGIMLLLYVKQEHAAYISEVEAETVGTG-IMGRMGNKGG----VAIRFQFHNTSICV  139 (313)
T ss_dssp             HHHHHHSCTTSCEEEEEE--EEETTEEEEEEEEGGGGGGEEEEEEEEEECS-GGGTSTTSEE----EEEEEEETTEEEEE
T ss_pred             HHHHHhcCCCCCEEEEEE--echhhhhhhhhhhhhhhhhcceeEeeeeccc-ccccccCCce----EEEEEEECCcEEEE
Confidence            455555542 24554422  1223445667777774333322222111111 0011111110    11233345678999


Q ss_pred             EEecccCCCCCCCchhhHHHHHHHHHHHHHHHHHc------CCCCCcEEEeecCCCcc
Q 013259          173 VNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEH------NLKPIPIILCGDWNGSK  224 (447)
Q Consensus       173 ~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~------~~~~~pvIl~GDFN~~p  224 (447)
                      +|+||.+...  ....|..+...+++.+.--....      -....-++++||||---
T Consensus       140 VnsHLaA~~~--~~~~Rn~d~~~I~~~l~f~~~~~~~~~~~i~~~d~vfw~GDLNyRi  195 (313)
T 3mtc_A          140 VNSHLAAHIE--EYERRNQDYKDICSRMQFCQPDPSLPPLTISNHDVILWLGDLNYRI  195 (313)
T ss_dssp             EEEECCCSGG--GHHHHHHHHHHHHHHCCBCCSCSSSCCBCTTSSSEEEEEEECCCCB
T ss_pred             EeeccCCCch--HHHHHHHHHHHHHHhcccCCCCCccCCccccCCceEEEeccccccc
Confidence            9999977542  24456666666654331000000      00123489999999754

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A

Probab=98.40  E-value=3e-07  Score=81.91  Aligned_cols=89  Identities=16%  Similarity=0.085  Sum_probs=67.6

Q ss_pred             HhhhhhHHHHhhhhcCC--CCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhccC-
Q 013259          300 RRASLTETDAFAFLKAD--NDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTT-  376 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~--~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~~-  376 (447)
                      ......+.++|..+|.|  ++ |.|+.+||+.+|.. .     ....+..++.++..+|.|++|.|+|+||+..+.... 
T Consensus        33 ~~~~~~l~~~F~~~D~d~~~~-G~i~~~e~~~~l~~-~-----~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~  105 (207)
T 2ehb_A           33 VEEVEALYELFKKLSSSIIDD-GLIHKEEFQLALFR-N-----RNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHP  105 (207)
T ss_dssp             HHHHHHHHHHHHHHTTSSSCS-SCEEHHHHHHHHHS-C-----TTCCCHHHHHHHHHHCTTCSSEECHHHHHHHHGGGST
T ss_pred             HHHHHHHHHHHHHhccccCCC-CccCHHHHHHHHhc-c-----ccccHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcc
Confidence            34566789999999999  99 99999999999976 3     334556788899999999999999999997764321 


Q ss_pred             ----------cccccccCCCccccccccc
Q 013259          377 ----------WSDQRNDLNDEDEDGFVKS  395 (447)
Q Consensus       377 ----------~~~~~~~~~~~~~~~~~~~  395 (447)
                                .+...|.+..|.+...|..
T Consensus       106 ~~~~~~~l~~~F~~~D~d~~G~I~~~E~~  134 (207)
T 2ehb_A          106 SAPVHEKVKFAFKLYDLRQTGFIEREELK  134 (207)
T ss_dssp             TSCHHHHHHHHHHHHCTTCCSSEEHHHHH
T ss_pred             CCCHHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence                      1234456666666665543

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A

Probab=98.37  E-value=3.7e-07  Score=82.73  Aligned_cols=90  Identities=12%  Similarity=0.048  Sum_probs=67.9

Q ss_pred             HhhhhhHHHHhhhhcCC--CCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhccC-
Q 013259          300 RRASLTETDAFAFLKAD--NDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTT-  376 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~--~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~~-  376 (447)
                      ......++++|..+|.|  ++ |.|+.+||+.+|.. +     ....+..++.++..+|.|++|.|+|+||+..+.... 
T Consensus        44 ~~ei~~l~~~F~~~D~d~~~~-G~I~~~El~~~l~~-~-----~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~  116 (226)
T 2zfd_A           44 VSEIEALYELFKKISSAVIDD-GLINKEEFQLALFK-T-----NKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHP  116 (226)
T ss_dssp             HHHHHHHHHHHHHHHTSSSCS-SSBCHHHHHHHHHS-C-----SSCCCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTST
T ss_pred             HHHHHHHHHHHHHhCcccCCC-CeEcHHHHHHHHhc-c-----CcccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHcc
Confidence            44566789999999999  99 99999999999876 3     334455678899999999999999999997664321 


Q ss_pred             ----------cccccccCCCcccccccccc
Q 013259          377 ----------WSDQRNDLNDEDEDGFVKSS  396 (447)
Q Consensus       377 ----------~~~~~~~~~~~~~~~~~~~~  396 (447)
                                .+...|.+..|.+...|...
T Consensus       117 ~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~  146 (226)
T 2zfd_A          117 NAPIDDKIHFSFQLYDLKQQGFIERQEVKQ  146 (226)
T ss_dssp             TSCHHHHHHHHHHHHCTTSSSSEEHHHHHH
T ss_pred             CCCHHHHHHHHHHHhCCCCCCcccHHHHHH
Confidence                      23445666667666666543

>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A

Probab=98.34  E-value=4.8e-08  Score=101.61  Aligned_cols=65  Identities=11%  Similarity=0.169  Sum_probs=5.2

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ...++++|+.||+|++ |+|+.+||+.+|+.+|     ..+++++++++|+.+|.|++|.|+|+||+.++.
T Consensus        10 e~~l~~~F~~fD~d~d-G~Is~~El~~~l~~lg-----~~~s~~el~~lf~~~D~d~~G~I~f~EF~~~~~   74 (624)
T 1djx_A           10 QHWIHSCLRKADKNKD-NKMNFKELKDFLKELN-----IQVDDGYARKIFRECDHSQTDSLEDEEIETFYK   74 (624)
T ss_dssp             ----------------------------------------------------------------CTTHHHH
T ss_pred             HHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHcC-----CCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence            3478899999999999 9999999999999999     789999999999999999999999999997663

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}

Probab=98.32  E-value=7.3e-07  Score=79.85  Aligned_cols=65  Identities=17%  Similarity=0.325  Sum_probs=58.8

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ...+..+|..+|.|++ |.|+.+||..++..++     ...+.++++.+|+.+|.|++|.|+++||...+.
T Consensus        56 ~~~~~~~f~~~D~d~d-G~I~~~Ef~~~~~~~~-----~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~  120 (211)
T 2ggz_A           56 NKHIDQVYNTFDTNKD-GFVDFLEFIAAVNLIM-----QEKMEQKLKWYFKLYDADGNGSIDKNELLDMFM  120 (211)
T ss_dssp             HHHHHHHHHHHCTTCS-SEEEHHHHHHHHHHHS-----CSSHHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCC-CeEeHHHHHHHHHHhc-----cCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHH
Confidence            3458889999999999 9999999999999887     667888999999999999999999999997663

>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1

Probab=98.29  E-value=3.7e-07  Score=99.41  Aligned_cols=66  Identities=14%  Similarity=0.209  Sum_probs=61.3

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ....++.+|+.||+|++ |+|+.+||+.+|..+|     ..+++++++.+|..+|.|+||.|+|+||+..|.
T Consensus       723 ~~~~~~~~F~~~D~d~~-G~I~~~El~~~l~~~g-----~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~  788 (863)
T 1sjj_A          723 QMNEFRASFNHFDRKKT-GMMDCEDFRACLISMG-----YNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMS  788 (863)
T ss_dssp             HHHHHHHHHTTTCSSSS-SEEESTTHHHHHHHHT-----CCCCTHHHHHHHHHHCTTSCSEEETTHHHHTHH
T ss_pred             HHHHHHHHHHHHCCCCC-CCcCHHHHHHHHHHcC-----CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            35678999999999999 9999999999999999     789999999999999999999999999997664

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}

Probab=98.28  E-value=9e-07  Score=81.87  Aligned_cols=64  Identities=22%  Similarity=0.280  Sum_probs=55.0

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ...+..+|+.+|.|++ |.|+.+||..++..++     ...++++++.+|+.+|.|++|.|+++||...+
T Consensus       128 ~~~~~~~f~~~D~d~d-G~I~~~Ef~~~l~~~~-----~~~~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l  191 (256)
T 2jul_A          128 TTYAHFLFNAFDADGN-GAIHFEDFVVGLSILL-----RGTVHEKLKWAFNLYDINKDGCITKEEMLAIM  191 (256)
T ss_dssp             HHHHHHHHHHSSCSCC-SEECSHHHHHHHHHHH-----SCCHHHHHHHHHHHTCCSSSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHhccCCC-CcCcHHHHHHHHHHHh-----ccChHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            3467888999999999 9999999999998887     66788889999999999999999999998665

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3

Probab=98.28  E-value=3.5e-07  Score=99.92  Aligned_cols=122  Identities=12%  Similarity=0.152  Sum_probs=71.7

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCC---CCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc----
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTG---HKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~---~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~----  374 (447)
                      ....++++|..+|.+ + |.|+.+||+.+|..++...   ....++.++++.|++.+|.|+||.|+|+||+.++-.    
T Consensus       729 ~~~~l~~~F~~~D~~-~-G~Is~~El~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~dG~Is~~EF~~l~~~~~~l  806 (900)
T 1qxp_A          729 EERQFRKLFVQLAGD-D-MEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKW  806 (900)
T ss_dssp             --------CCCCTTC-S-SCBCHHHHTTTSCC----CCSCC--CCCHHHHHHHHHHHCCSSSSSBCSHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCC-C-CccCHHHHHHHHHHhcccccccccCCCCHHHHHHHHHHHCCCCCCeECHHHHHHHHHHHHHH
Confidence            455788999999997 8 9999999999998765110   013578899999999999999999999999966522    


Q ss_pred             cCcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          375 TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                      ...+...|.+..|.++..|.......+|+.++...     +..  ....|| +.+|.|+
T Consensus       807 ~~~F~~~D~d~dG~Is~~El~~~l~~~g~~ls~~~-----~~~--l~~~~d-d~dg~Is  857 (900)
T 1qxp_A          807 QGIYKRFETDRSGTIGSNELPGAFEAAGFHLNQHI-----YSM--IIRRYS-DETGNMD  857 (900)
T ss_dssp             SSCC----CCSCC-------CCTTGGGTCCCCSCC-----CC-----------CCSCCC
T ss_pred             HHHHHHhCCCCCCccCHHHHHHHHHhcCCCCCHHH-----HHH--HHHHhc-CCCCeEC
Confidence            55677888899999999998888888887655433     222  334556 6677654

>1sra_A Sparc; extracellular matrix protein, calcium-binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.3

Probab=98.23  E-value=3.9e-07  Score=75.71  Aligned_cols=64  Identities=14%  Similarity=0.184  Sum_probs=55.6

Q ss_pred             hhhhhHHHHhhhhcCC-CCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          301 RASLTETDAFAFLKAD-NDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~-~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .....+.-.|..+|.| +| |+|+..||..+++.+.       ..+..++.+++.+|.|+||+|+++||+..+
T Consensus        74 ~~~~~l~W~F~~lD~n~~D-G~Isr~EL~~i~~~l~-------~~e~cv~~ff~~cD~d~Dg~ISl~Ew~~Cl  138 (151)
T 1sra_A           74 MYIFPVHWQFGQLDQHPID-GYLSHTELAPLRAPLI-------PMEHCTTRFFETCDLDNDKYIALDEWAGCF  138 (151)
T ss_dssp             GGHHHHHHHHHHHCCTTCS-SEECTTTTGGGGSTTS-------TTGGGHHHHHHHHCTTCSSSEEHHHHHHHT
T ss_pred             cchhHHHhHHHHHCCCCCC-CcCcHHHHHHHHHHhc-------ChHHHHHHHHHHhCCCCCCcCCHHHHHHHh
Confidence            3455677789999997 99 9999999999986644       677889999999999999999999999655

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A

Probab=98.21  E-value=1.8e-06  Score=78.40  Aligned_cols=63  Identities=17%  Similarity=0.276  Sum_probs=45.7

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ..+..+|+.+|.|++ |.|+.+||..++..++     ....++.++.+|+.+|.|+||.|+++||...+
T Consensus       102 ~~~~~lf~~~D~d~~-G~I~~~Ef~~~l~~~~-----~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l  164 (229)
T 3dd4_A          102 TYAHFLFNAFDTDHN-GAVSFEDFIKGLSILL-----RGTVQEKLNWAFNLYDINKDGYITKEEMLDIM  164 (229)
T ss_dssp             HHHHHHHHTTCSSCC-SSCCHHHHHHHHHHHH-----HSCHHHHHHHHHHHHCTTCSSCCBHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCC-CeEeHHHHHHHHHHHc-----CCChHHHHHHHHHHhCCCCCCeECHHHHHHHH
Confidence            345667777777777 7777777777777665     44556677777777777777777777777554

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A

Probab=98.15  E-value=2.3e-07  Score=83.51  Aligned_cols=92  Identities=10%  Similarity=-0.002  Sum_probs=60.7

Q ss_pred             hhhhhHHHHhhhhcC--------CCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCce-eehHHHHHH
Q 013259          301 RASLTETDAFAFLKA--------DNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGV-VDYKEFQQR  371 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~--------~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~-i~~~EF~~~  371 (447)
                      .....+.++|..+|.        ++| |+|+.+||+. |..+|     ..++.   +.+++.+|.|++|. |+|+||+..
T Consensus        48 ~ei~~l~~~F~~~D~~~~~~d~~~~d-G~I~~~E~~~-l~~lg-----~~~~~---~~lf~~~D~d~dG~~I~f~EF~~~  117 (214)
T 2l4h_A           48 QEILLAHRRFCELLPQEQRSVESSLR-AQVPFEQILS-LPELK-----ANPFK---ERICRVFSTSPAKDSLSFEDFLDL  117 (214)
T ss_dssp             HHHHHHHHHHHHHSCGGGCCHHHHTT-SEECHHHHTT-CHHHH-----TSTTH---HHHHHHHCCSSSCCSEEHHHHHHH
T ss_pred             HHHHHHHHHHHHhCcccccccccccC-CcCCHHHHHH-hhccC-----CChHH---HHHHHHhCcCCCCCEecHHHHHHH
Confidence            345566777888776        556 8888888888 88887     55554   35777888888888 888888866


Q ss_pred             Hhcc-----------CcccccccCCCcccccccccccccccc
Q 013259          372 IWKT-----------TWSDQRNDLNDEDEDGFVKSSLEQTIG  402 (447)
Q Consensus       372 ~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~g  402 (447)
                      +...           ..+...|.+..|.+...|.......+|
T Consensus       118 ~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~  159 (214)
T 2l4h_A          118 LSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLT  159 (214)
T ss_dssp             HHHTSSCSCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHH
T ss_pred             HHHHcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHh
Confidence            5321           123344666666666666544444333

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3

Probab=98.12  E-value=2.7e-06  Score=92.91  Aligned_cols=63  Identities=13%  Similarity=0.142  Sum_probs=59.5

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ..++.+|+.||+|++ |+|+.+||+.+|+.+|     ..+++++++.++..+| |++|.|+|+||+..+.
T Consensus       607 ~~l~~~F~~~D~d~~-G~Is~~El~~~l~~~g-----~~l~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~  669 (900)
T 1qxp_A          607 RNYLTIFRKFDLDKS-GSMSAYEMRMAIEAAG-----FKLPCQLHQVIVARFA-DDELIIDFDNFVRCLV  669 (900)
T ss_dssp             HHHHHHHGGGCTTCC-SCCBHHHHHHHHHHTT-----EECCHHHHHHHHHHTS-CSSSBCCHHHHHHHHH
T ss_pred             HHHHHHHHhhCCCCC-CeECHHHHHHHHHHhC-----CCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHH
Confidence            678999999999999 9999999999999999     7899999999999999 9999999999997764

>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B

Probab=98.10  E-value=2e-06  Score=91.66  Aligned_cols=67  Identities=10%  Similarity=0.109  Sum_probs=44.8

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh-ccCCCCCC---------CCHHHHHHHHHHcCCC----CCceeehHHH
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQL-NLTGHKHG---------LADEETKDLWVQADID----GNGVVDYKEF  368 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~-g~~~~~~~---------~~~~~~~~~~~~~D~~----~~g~i~~~EF  368 (447)
                      ..+++++|+.||.+++ |+|+.+||+.+|+.+ |     ..         ++++++++||+.+|.|    ++|.|+|+||
T Consensus       218 r~el~~aF~~fD~d~~-g~Is~~eL~~fL~~~Qg-----e~~~~~~~~~~~t~ee~~~iI~~~d~d~~~~~dg~is~eeF  291 (799)
T 2zkm_X          218 RPEIDEIFTSYHAKAK-PYMTKEHLTKFINQKQR-----DSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPEGM  291 (799)
T ss_dssp             CHHHHTTCC---------CCCHHHHHHHHHHTCC--------------------CHHHHHHHHCCC--------CCHHHH
T ss_pred             HHHHHHHHHHhccCCC-CeEcHHHHHHHHHHhcC-----CcccccccccCCCHHHHHHHHHHhhcccccccCCccchhhh
Confidence            4689999999999999 999999999999987 5     44         7889999999999999    8999999999


Q ss_pred             HHHHhcc
Q 013259          369 QQRIWKT  375 (447)
Q Consensus       369 ~~~~~~~  375 (447)
                      +.+|...
T Consensus       292 ~~~L~S~  298 (799)
T 2zkm_X          292 VWFLCGP  298 (799)
T ss_dssp             HHHHHST
T ss_pred             hhcccCc
Confidence            9888653

>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C

Probab=98.09  E-value=1.2e-06  Score=73.37  Aligned_cols=67  Identities=18%  Similarity=0.126  Sum_probs=26.3

Q ss_pred             hHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          305 TETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       305 ~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .....|..+|.|++ |.|+.+||..++..+.-.......++++++.+|+.+|.|+||.|+++||...+
T Consensus        28 ~~~~~f~~~D~d~d-G~I~~~Ef~~~l~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l   94 (143)
T 3a4u_B           28 ASFSQPGSMGLDKN-TVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAI   94 (143)
T ss_dssp             ------------------------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHHHTC
T ss_pred             CCHHHHHHhCCCCC-CcCcHHHHHHHHHHHhcccccccCHHHHHHHHHHHhCCCCCCccCHHHHHHHH
Confidence            34468999999999 99999999999876520000012345779999999999999999999998544

>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A

Probab=98.00  E-value=7e-06  Score=85.33  Aligned_cols=66  Identities=8%  Similarity=0.035  Sum_probs=58.8

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh-ccCCCCCC-CCHHHHHHHHHHcCCC----CCceeehHHHHHHHhcc
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQL-NLTGHKHG-LADEETKDLWVQADID----GNGVVDYKEFQQRIWKT  375 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~-g~~~~~~~-~~~~~~~~~~~~~D~~----~~g~i~~~EF~~~~~~~  375 (447)
                      ..+++++|+.||.+ + |+|+.+||+.+|... |     .. ++++++++||+.+|.|    ++|.|+|+||+.+|...
T Consensus        79 ~~el~~aF~~fD~~-~-G~Is~~EL~~fL~~~qg-----e~~ls~ee~~~ii~~~d~d~~~~~dG~Is~deF~~~L~s~  150 (624)
T 1djx_A           79 RAEIDRAFEEAAGS-A-ETLSVERLVTFLQHQQR-----EEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSA  150 (624)
T ss_dssp             CHHHHHHHHHHHTT-S-SSEEHHHHHHHHHHTSC-----CSSCSHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHHST
T ss_pred             HHHHHHHHHHhcCC-C-CeecHHHHHHHHHHHhC-----CCCCCHHHHHHHHHHhCCChhhccCCCCCHHHHHHHhcCc
Confidence            35799999999985 8 999999999999975 6     55 8999999999999998    79999999999888653

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A

Probab=97.91  E-value=1e-05  Score=63.94  Aligned_cols=60  Identities=17%  Similarity=0.252  Sum_probs=51.8

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ..++.++|+.+|  ++ |.|+.+||..++...       ....++++.+|+.+|.|++|.|+.+||...+
T Consensus         9 ~~ei~~~~~~~D--~~-g~i~~~eF~~~~~~~-------~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l   68 (109)
T 3fs7_A            9 AKDIESALSSCQ--AA-DSFNYKSFFSTVGLS-------SKTPDQIKKVFGILDQDKSGFIEEEELQLFL   68 (109)
T ss_dssp             HHHHHHHHHHTC--ST-TCCCHHHHHHHHTCT-------TCCHHHHHHHHHHHSTTCSSSBCHHHHHTTG
T ss_pred             HHHHHHHHHhcC--CC-CcCcHHHHHHHHhcC-------CCcHHHHHHHHHHHCCCCCCeEeHHHHHHHH
Confidence            457888999998  78 999999999987643       3678899999999999999999999998544

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A

Probab=97.90  E-value=1.8e-05  Score=62.36  Aligned_cols=61  Identities=13%  Similarity=0.179  Sum_probs=52.2

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ..++.++|+.+|  ++ |.|+.+||..++....       ...++++.+|+.+|.|++|.|+.+||...+.
T Consensus         8 ~~e~~~~~~~~d--~~-g~i~~~eF~~~~~~~~-------~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~   68 (109)
T 1rwy_A            8 AEDIKKAIGAFT--AA-DSFDHKKFFQMVGLKK-------KSADDVKKVFHILDKDKSGFIEEDELGSILK   68 (109)
T ss_dssp             HHHHHHHHHTTC--ST-TCCCHHHHHHHHTGGG-------SCHHHHHHHHHHHSTTCSSEECHHHHHTHHH
T ss_pred             HHHHHHHHHHcC--CC-CcEeHHHHHHHHhcCc-------chHHHHHHHHHHHCCCCCCeEcHHHHHHHHH
Confidence            457888999998  88 9999999999875322       5678899999999999999999999996663

>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}

Probab=97.90  E-value=8.7e-06  Score=70.86  Aligned_cols=120  Identities=11%  Similarity=0.008  Sum_probs=79.3

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcC---CCCCceeehHHHHHHHhc----
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQAD---IDGNGVVDYKEFQQRIWK----  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D---~~~~g~i~~~EF~~~~~~----  374 (447)
                      ....++++|..+|  ++ |+|+.+||+.+|   |     ..+++++++.++..+|   .+++|.|+|+||+..+..    
T Consensus        26 ~~~~~~~~F~~~D--~d-G~I~~~el~~~l---g-----~~~~~~~~~~i~~~~d~~~~~~~~~i~~~ef~~~~~~~~~~   94 (179)
T 3a8r_A           26 GWAAVEKRFNQLQ--VD-GVLLRSRFGKCI---G-----MDGSDEFAVQMFDSLARKRGIVKQVLTKDELKDFYEQLTDQ   94 (179)
T ss_dssp             CHHHHHHHHHHHC--BT-TBEEGGGHHHHH---T-----CCSCHHHHHHHHHHHHHHHTCCSSEECHHHHHHHHHHHHCC
T ss_pred             hHHHHHHHHhccC--CC-CCCcHHHHHHHH---C-----CCCcHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHHcCC
Confidence            4568899999999  78 999999999964   7     6678888999999888   567899999999865421    


Q ss_pred             ------cCcccccccCCCccccccccccccc-ccceE-Eecc-ccCCcccccCCCCCCCCCCCCcceeE
Q 013259          375 ------TTWSDQRNDLNDEDEDGFVKSSLEQ-TIGFS-VKNA-VLFPPEVEKGRWPENYSLSDHARLTV  434 (447)
Q Consensus       375 ------~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~  434 (447)
                            ...+...|.+..|.+...|...... .+|.+ ++.. .....++..  ....+|.+.+|.|+.
T Consensus        95 ~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~--~~~~~D~d~dG~I~~  161 (179)
T 3a8r_A           95 GFDNRLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTAL--IMEELDPTNLGYIEM  161 (179)
T ss_dssp             CHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH--HHHHHSTTCCSEECH
T ss_pred             CHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccccccccccchHHHHHH--HHHHhCCCCCCcCcH
Confidence                  1223455667777777766554443 44432 1000 000112222  345678888998763

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4

Probab=97.89  E-value=1.7e-05  Score=62.58  Aligned_cols=61  Identities=18%  Similarity=0.275  Sum_probs=52.1

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ..++.++|+.+|.  + |.|+.+||..++...       ....++++.+|+.+|.|++|.|+.+||...+.
T Consensus         8 ~~ei~~~~~~~d~--~-g~i~~~eF~~~~~~~-------~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~   68 (109)
T 5pal_A            8 ADDINKAISAFKD--P-GTFDYKRFFHLVGLK-------GKTDAQVKEVFEILDKDQSGFIEEEELKGVLK   68 (109)
T ss_dssp             HHHHHHHHHHTCS--T-TCCCHHHHHHHHTCT-------TCCHHHHHHHHHHHCTTCSSEECHHHHHTHHH
T ss_pred             HHHHHHHHHHhCC--C-CcCcHHHHHHHHhhc-------cCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence            4578889999987  8 999999999887542       36788999999999999999999999986653

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4

Probab=97.87  E-value=2.2e-05  Score=61.90  Aligned_cols=61  Identities=15%  Similarity=0.232  Sum_probs=51.8

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ..++.++|..+|  ++ |.|+.+||..++....       ...++++.+|+.+|.|++|.|+.+||...+.
T Consensus         9 ~~e~~~~~~~~d--~~-g~i~~~eF~~~~~~~~-------~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~   69 (109)
T 1bu3_A            9 DADVAAALKACE--AA-DSFNYKAFFAKVGLTA-------KSADDIKKAFFVIDQDKSGFIEEDELKLFLQ   69 (109)
T ss_dssp             HHHHHHHHHHTC--ST-TCCCHHHHHHHHTGGG-------SCHHHHHHHHHHHCTTCSSSEEHHHHHTHHH
T ss_pred             HHHHHHHHHHhC--CC-CcCcHHHHHHHHHcCh-------hhHHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence            456788899998  88 9999999999875433       5678899999999999999999999986663

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A

Probab=97.85  E-value=1.8e-05  Score=62.38  Aligned_cols=60  Identities=15%  Similarity=0.179  Sum_probs=51.2

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ..++.++|+.+|  ++ |.|+.+||..++....       ...++++.+|+.+|.|++|.|+.+||...+
T Consensus         8 ~~e~~~l~~~~d--~~-g~i~~~eF~~~~~~~~-------~~~~~l~~~F~~~D~d~~G~I~~~el~~~l   67 (108)
T 2pvb_A            8 DADVAAALAACS--AA-DSFKHKEFFAKVGLAS-------KSLDDVKKAFYVIDQDKSGFIEEDELKLFL   67 (108)
T ss_dssp             HHHHHHHHHHTC--ST-TCCCHHHHHHHHTGGG-------SCHHHHHHHHHHHCTTCSSSBCHHHHHTGG
T ss_pred             HHHHHHHHHHhC--CC-CcCcHHHHHHHHhCCh-------hHHHHHHHHHHHHCCCCCCcCCHHHHHHHH
Confidence            356788899998  88 9999999999875433       568889999999999999999999998554

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A

Probab=97.84  E-value=1.9e-05  Score=62.18  Aligned_cols=60  Identities=17%  Similarity=0.194  Sum_probs=51.0

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ..++.++|+.+|  ++ |.|+.+||..++....       ...++++.+|+.+|.|++|.|+.+||...+
T Consensus         8 ~~e~~~~~~~~d--~~-g~i~~~eF~~~~~~~~-------~~~~~l~~~F~~~D~d~~G~I~~~el~~~l   67 (108)
T 1rro_A            8 AEDIAAALQECQ--DP-DTFEPQKFFQTSGLSK-------MSASQVKDIFRFIDNDQSGYLDGDELKYFL   67 (108)
T ss_dssp             HHHHHHHHHHTC--ST-TCCCHHHHHHHHSGGG-------SCHHHHHHHHHHHCTTCSSEECTHHHHTGG
T ss_pred             HHHHHHHHHHcc--CC-CCcCHHHHHHHHhcCc-------ccHHHHHHHHHHhCCCCCCcCCHHHHHHHH
Confidence            457788899998  88 9999999999874322       567889999999999999999999998554

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}

Probab=97.80  E-value=3.7e-06  Score=69.62  Aligned_cols=63  Identities=6%  Similarity=-0.041  Sum_probs=31.5

Q ss_pred             hHHHHhhhhcCCCCCCcccHHHHHHHHHHh-ccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          305 TETDAFAFLKADNDGDYITYSGFCEALEQL-NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       305 ~l~~~F~~~D~~~~~G~i~~~el~~~l~~~-g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ..+++|+.+|.|++ |.|+.+||..++... .     .....++++.+|+.+|.|++|.|+.+||...+.
T Consensus         4 ~~~~l~~~~D~d~~-G~I~~~EF~~~~~~~~~-----~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~   67 (135)
T 3h4s_E            4 TEKSMLLETTSTTK-METKYEDMLPVMAEKMD-----VEEFVSELCKGFSLLADPERHLITAESLRRNSG   67 (135)
T ss_dssp             ----------------CCCC-----------C-----HHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGG
T ss_pred             hHHHHHHHHcCCCC-CcEeHHHHHHHHHHHcc-----ccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence            45778999999999 999999999987652 2     223457799999999999999999999997663

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*

Probab=97.74  E-value=7.6e-05  Score=64.67  Aligned_cols=61  Identities=10%  Similarity=0.239  Sum_probs=47.0

Q ss_pred             HHHhhhhcCCCCCCc-ccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          307 TDAFAFLKADNDGDY-ITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       307 ~~~F~~~D~~~~~G~-i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .++|..+|.|++ |. |+.+||..++..+.-    ....++++..+|+.+|.|++|.|+.+||...+
T Consensus        63 ~~l~~~~D~d~~-G~~I~~~EF~~~~~~~~~----~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l  124 (183)
T 1dgu_A           63 ERICRVFSTSPA-KDSLSFEDFLDLLSVFSD----TATPDIKSHYAFRIFDFDDDGTLNREDLSRLV  124 (183)
T ss_dssp             HHHHHHHSCSSS-SCCCCHHHHHHHHHHHST----TCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHH
T ss_pred             HHHHHHhCCCCC-CCEecHHHHHHHHHHhcC----CCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHH
Confidence            357777888888 88 999998888876540    22335678888999999999999999988655

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A

Probab=97.73  E-value=3.1e-05  Score=61.10  Aligned_cols=61  Identities=13%  Similarity=0.251  Sum_probs=51.5

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ...++.++|+.+|  ++ |.|+.+||..++..       .....++++.+|+.+|.|++|.|+.+||...+
T Consensus         8 t~~e~~~~~~~~d--~~-g~i~~~ef~~~~~~-------~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l   68 (110)
T 1pva_A            8 KADDIKKALDAVK--AE-GSFNHKKFFALVGL-------KAMSANDVKKVFKAIDADASGFIEEEELKFVL   68 (110)
T ss_dssp             CHHHHHHHHHHTC--ST-TCCCHHHHHHHHTC-------TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGG
T ss_pred             CHHHHHHHHHhcC--CC-CcCcHHHHHHHHcc-------CcchHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            3457888999998  88 99999999988742       23567889999999999999999999998555

>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A

Probab=97.69  E-value=5.5e-05  Score=69.20  Aligned_cols=61  Identities=11%  Similarity=0.143  Sum_probs=53.8

Q ss_pred             hHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          305 TETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       305 ~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      -+.-+|+.||.|++ |.|+..||+.+|..+.     ..-.++.++-+|+.+| |+||.|+.+|+...+
T Consensus       133 ~a~~lf~~FD~~~~-G~I~f~ef~~aLs~l~-----rG~leeKL~w~F~lyD-D~~G~I~~~El~~il  193 (261)
T 1eg3_A          133 CLNWLLNVYDTGRT-GRIRVLSFKTGIISLC-----KAHLEDKYRYLFKQVA-SSTGFCDQRRLGLLL  193 (261)
T ss_dssp             HHHHHHHHHCTTCC-SEEEHHHHHHHHHHTS-----SSCHHHHHHHHHHHHS-CTTSCBCHHHHHHHH
T ss_pred             HHHHHHHHccCCCC-ceEeHHHHHHHHHHHc-----CCCHHHHHHHHHheee-CCCCCCcHHHHHHHH
Confidence            44558999999999 9999999999999875     5567788999999999 999999999998666

>1nub_A Basement membrane protein BM-40; extracellular module, glycoprotein, anti-adhesive protein, C binding, site-directed mutagenesis; HET: NAG; 2.80A {Homo sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A* 1bmo_A*

Probab=97.68  E-value=9.1e-06  Score=73.27  Aligned_cols=61  Identities=15%  Similarity=0.218  Sum_probs=52.7

Q ss_pred             hhHHHHhhhhcC-CCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          304 LTETDAFAFLKA-DNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       304 ~~l~~~F~~~D~-~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ..+.-.|..+|. |+| |+|+.+||..++..+.       ..+.-+..+|+..|.|+||+|+++||...+
T Consensus       155 ~~v~w~F~~lD~~n~d-g~l~~~El~~i~~~l~-------~~~~c~~~~~~~cD~n~D~~is~~Ew~~cf  216 (229)
T 1nub_A          155 FPVHWQFGQLDQHPID-GYLSHTELAPLRAPLI-------PMEHCTTRFFETCDLDNDKYIALDEWAGCF  216 (229)
T ss_dssp             HHHHHHHHHHTTTTCS-SEECTTTTGGGGSTTS-------TTGGGHHHHHHHHCTTCSSCEEHHHHHHHT
T ss_pred             HHHHHHHHHhCCCCCC-CCCCHHHHHHHHHHHh-------hHHHHHHHHHHHcCCCCCCcCCHHHHHHHh
Confidence            356778999999 899 9999999999886654       356678999999999999999999999655

>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A

Probab=97.54  E-value=0.00019  Score=65.67  Aligned_cols=69  Identities=7%  Similarity=0.019  Sum_probs=52.8

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHH-------hccCCC-CCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQ-------LNLTGH-KHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~-------~g~~~~-~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ..+.++=+|+.+| |++ |+|+..||..+|+.       +|-... +....++.++++|+.+|  +||.|+.+||++.+.
T Consensus       166 leeKL~w~F~lyD-D~~-G~I~~~El~~il~~i~~i~~~vge~~~~~~~~~e~~v~~~F~~~d--~dg~It~~EFl~~~~  241 (261)
T 1eg3_A          166 LEDKYRYLFKQVA-SST-GFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN--NKPEIEAALFLDWMR  241 (261)
T ss_dssp             HHHHHHHHHHHHS-CTT-SCBCHHHHHHHHHHHHHHHHHTTCGGGGTCSCCHHHHHHHHHHTT--TCSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHheee-CCC-CCCcHHHHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHHHhCC--CCCcCCHHHHHHHHH
Confidence            4457788999999 999 99999999999865       230000 02235777999999996  789999999998775


Q ss_pred             c
Q 013259          374 K  374 (447)
Q Consensus       374 ~  374 (447)
                      .
T Consensus       242 ~  242 (261)
T 1eg3_A          242 L  242 (261)
T ss_dssp             T
T ss_pred             h
Confidence            4

>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B

Probab=97.53  E-value=7e-05  Score=79.87  Aligned_cols=78  Identities=10%  Similarity=0.159  Sum_probs=61.6

Q ss_pred             hhhhHHHHhHHHHHH---HhhhhhHHHHhh--hhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCC--
Q 013259          285 ASWSEAVFGMFKCLL---RRASLTETDAFA--FLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADI--  357 (447)
Q Consensus       285 ~sw~~~v~~~~~~~~---~~~~~~l~~~F~--~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~--  357 (447)
                      ..|...+...+...+   ......++++|.  .||+|++ |+|+.+||+.+|.          ...++++++|+++|.  
T Consensus       124 ~~Wv~GL~~L~~~~~~~~~~~~~~Lk~~F~~~~fD~d~d-G~Is~~EL~~~l~----------~~~~ev~~li~~~d~~~  192 (799)
T 2zkm_X          124 KAWAEDVLALVKHPLTANASRSTFLDKILVKLKMQLNSE-GKIPVKNFFQMFP----------ADRKRVEAALSACHLPK  192 (799)
T ss_dssp             HHHHHHHHHHHHCTTGGGCCHHHHHHHHHHHHHHSCCTT-SCEEHHHHHHHSC----------SCHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHHHHHHHHHhccccHHHHHHHHhHHhccCCCCC-CeECHHHHHHHHh----------hhHHHHHHHHHHhCcCc
Confidence            357777766555443   223457899999  8999999 9999999999863          246899999999985  


Q ss_pred             -----CCCceeehHHHHHHHh
Q 013259          358 -----DGNGVVDYKEFQQRIW  373 (447)
Q Consensus       358 -----~~~g~i~~~EF~~~~~  373 (447)
                           +++|.|+|+||+..+.
T Consensus       193 ~~~D~d~~g~idf~EF~~~~~  213 (799)
T 2zkm_X          193 GKNDAINPEDFPEPVYKSFLM  213 (799)
T ss_dssp             CTTCEECGGGCCHHHHHHHHH
T ss_pred             cccccCCCCcCCHHHHHHHHH
Confidence                 7889999999997663

>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}

Probab=97.52  E-value=0.00019  Score=76.75  Aligned_cols=69  Identities=10%  Similarity=0.108  Sum_probs=60.2

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCC-------CCCCHHHHHHHHHHcCCC----CCceeehHHHHHH
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHK-------HGLADEETKDLWVQADID----GNGVVDYKEFQQR  371 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~-------~~~~~~~~~~~~~~~D~~----~~g~i~~~EF~~~  371 (447)
                      ..+|+++|+.+|.+++ |+|+.+||+.+|+..+  ++.       ..++.+++++||+.++.+    ++|.|++++|..+
T Consensus       222 R~EI~eiF~~ydsd~~-g~mT~~EL~~FL~~~Q--~e~~~~e~~~~~~t~e~~~~iI~k~e~~~~~~~~g~LsldgF~~y  298 (885)
T 3ohm_B          222 RPDIDKILLEIGAKGK-PYLTLEQLMDFINQKQ--RDPRLNEVLYPPLRPSQARLLIEKYEPNQQFLERDQMSMEGFSRY  298 (885)
T ss_dssp             CHHHHHHHHHTTCCST-TCEEHHHHHHHHHHHS--SCTTSCTTTSCCCCHHHHHHHHHHHCCCHHHHHTTEECHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCC-CccCHHHHHHHHHHhc--CcccccccccccCCHHHHHHHHHHhcCChhhhccCccchhhhhhh
Confidence            4689999999999999 9999999999999985  111       137899999999999999    7899999999988


Q ss_pred             Hhc
Q 013259          372 IWK  374 (447)
Q Consensus       372 ~~~  374 (447)
                      |..
T Consensus       299 L~S  301 (885)
T 3ohm_B          299 LGG  301 (885)
T ss_dssp             HTS
T ss_pred             ccC
Confidence            865

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A

Probab=97.41  E-value=1.9e-05  Score=62.13  Aligned_cols=60  Identities=13%  Similarity=0.138  Sum_probs=49.1

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ..++.++|+.+|  ++ |.|+.+||..++...       ....++++.+|+.+|.|++|.|+.+||...+
T Consensus         8 ~~e~~~l~~~~d--~~-g~i~~~eF~~~~~~~-------~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l   67 (108)
T 2kyc_A            8 PSDIAAALRDCQ--AP-DSFSPKKFFQISGMS-------KKSSSQLKEIFRILDNDQSGFIEEDELKYFL   67 (108)
T ss_dssp             HHHHHHHHTTSC--ST-TTCCHHHHHHHHTCT-------TCCSSSHHHHCSSSCSCCSSCCCGGGTTTSH
T ss_pred             HHHHHHHHHHcC--CC-CcCCHHHHHHHHhhC-------cccHHHHHHHHHHhCCCCCCeEcHHHHHHHH
Confidence            457788899998  88 999999999887421       2445678999999999999999999998544

>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1

Probab=97.27  E-value=0.00026  Score=76.98  Aligned_cols=61  Identities=5%  Similarity=0.130  Sum_probs=28.1

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHH
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQ  370 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~  370 (447)
                      ..+..+|..+|.|++ |.|+.+||..++....-    ...+.+++...|+.+ .|++|.|+.+||..
T Consensus       761 ~~~~~~~~~~D~d~d-G~I~~~EF~~~~~~~~~----~~~~~~~l~~aF~~~-~d~~G~Is~~El~~  821 (863)
T 1sjj_A          761 AEFARIMSIVDPNRM-GVVTFQAFIDFMSRETA----DTDTADQVMASFKIL-AGDKNYITVDELRR  821 (863)
T ss_dssp             HHHHHHHHHHCTTSC-SEEETTHHHHTHHHHST----TCSSSHHHHHHHHGG-GTSSSEEEHHHHHH
T ss_pred             HHHHHHHHHhCCCCC-CcCcHHHHHHHHHHHhc----CCCCHHHHHHHHHHH-hCCCCcCcHHHHHH
Confidence            344445555555555 55555555554443210    112334444445444 44455555555543

>1tuz_A Diacylglycerol kinase alpha; transferase, HR532, nesgc, structural genomics, PSI, protein structure initiative; NMR {Homo sapiens} SCOP: a.39.1.7

Probab=97.23  E-value=0.0014  Score=52.22  Aligned_cols=77  Identities=14%  Similarity=0.194  Sum_probs=55.8

Q ss_pred             HHhHHHHHHHhhhhhHHHHhhhh-c-----CCCCCCcccHHHHHHHHHHhccCCCCCC-CCHHHHHHHHHHcCCCC----
Q 013259          291 VFGMFKCLLRRASLTETDAFAFL-K-----ADNDGDYITYSGFCEALEQLNLTGHKHG-LADEETKDLWVQADIDG----  359 (447)
Q Consensus       291 v~~~~~~~~~~~~~~l~~~F~~~-D-----~~~~~G~i~~~el~~~l~~~g~~~~~~~-~~~~~~~~~~~~~D~~~----  359 (447)
                      .+..++....-...+|+.+++-| |     ...+ |.|+.++|+.++...=    +.. .+.+-.+.++..||.|+    
T Consensus        12 ~l~~L~~~t~fs~~elk~~y~~F~~g~~~k~cp~-G~i~~e~F~~i~~~ff----p~~~~p~~~~~~lF~~Fd~~~~~~~   86 (118)
T 1tuz_A           12 DFAQLQKYMEYSTKKVSDVLKLFEDGEMAKYVQG-DAIGYEGFQQFLKIYL----EVDNVPRHLSLALFQSFETGHCLNE   86 (118)
T ss_dssp             HHHHHHHHHHHCCCCHHHHHHHHHTSGGGGGEET-TEECHHHHHHHHHHHT----TCSSCCHHHHHHHHHHSCCCCCTTC
T ss_pred             HHHHHHHHcccCHHHHHHHHHHHccccccccCCC-CCCCHHHHHHHHHHhC----cCCCCHHHHHHHHHHHHhccccccc
Confidence            34444444433455666666666 3     3557 9999999999999863    022 56677788999999985    


Q ss_pred             ----CceeehHHHHHHH
Q 013259          360 ----NGVVDYKEFQQRI  372 (447)
Q Consensus       360 ----~g~i~~~EF~~~~  372 (447)
                          +|.|+|.||+-++
T Consensus        87 ~~~~~g~I~fkefi~~L  103 (118)
T 1tuz_A           87 TNVTKDVVCLNDVSCYF  103 (118)
T ss_dssp             CCCCSCCEEHHHHHHHH
T ss_pred             ccCCCCeEeHHHHHHHH
Confidence                8999999999666

>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A

Probab=97.02  E-value=0.00079  Score=71.58  Aligned_cols=70  Identities=13%  Similarity=0.122  Sum_probs=58.7

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCC-------CCCHHHHHHHHHHcCC--C----CCceeehHHH
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKH-------GLADEETKDLWVQADI--D----GNGVVDYKEF  368 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~-------~~~~~~~~~~~~~~D~--~----~~g~i~~~EF  368 (447)
                      ...+|+++|+.+|.|++ |+|+. ||+.+|+..+  ++..       ..+++++++||+.++.  +    ++|.|++++|
T Consensus       227 ~R~EI~eiF~~y~~dg~-~~mT~-eL~~FL~~~Q--~E~~~~~~~~~~~t~e~~~~iI~kye~~~~~~~~~~g~LsldgF  302 (816)
T 3qr0_A          227 ERSEIEGIFKELSKNKG-NITTV-MFRDFLNDMQ--RHPSLHKTLFPLYTDAQCEALINDYESAVNKKGKKKGQLTKEGL  302 (816)
T ss_dssp             CCTHHHHHHHHHTTTSS-SEEHH-HHHHHHHHTS--SCTTSCTTTSCCCCHHHHHHHHHHHHHHHHGGGCBTTEECHHHH
T ss_pred             CHHHHHHHHHHHccCCC-CcccH-HHHHHHHHhC--CccccccccccccCHHHHHHHHHHhccccchhhhccCCccHHHH
Confidence            34689999999999999 99999 9999999986  1110       1689999999999887  5    6899999999


Q ss_pred             HHHHhcc
Q 013259          369 QQRIWKT  375 (447)
Q Consensus       369 ~~~~~~~  375 (447)
                      ..+|...
T Consensus       303 ~~yL~S~  309 (816)
T 3qr0_A          303 LYFLMCE  309 (816)
T ss_dssp             HHHHHSG
T ss_pred             HHHhhcc
Confidence            9988653

>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}

Probab=96.84  E-value=0.00099  Score=71.29  Aligned_cols=76  Identities=13%  Similarity=0.241  Sum_probs=43.8

Q ss_pred             hhhHHHHhHHHHHH---HhhhhhHHHHhhh--hcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCC--
Q 013259          286 SWSEAVFGMFKCLL---RRASLTETDAFAF--LKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADID--  358 (447)
Q Consensus       286 sw~~~v~~~~~~~~---~~~~~~l~~~F~~--~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~--  358 (447)
                      .|...+...+...+   ......++++|..  +|+|++ |.|+.+||.++|..          +.++++.+|+++|.+  
T Consensus       129 ~W~~gL~~L~~~~~~~~~~~~~~L~kaf~~~~~D~n~d-GkIs~kel~~~l~~----------~~~~v~~l~~~~d~~~~  197 (885)
T 3ohm_B          129 VWSEELFKLAMNILAQNASRNTFLRKAYTKLKLQVNQD-GRIPVKNILKMFSA----------DKKRVETALESCGLKFN  197 (885)
T ss_dssp             HHHHHHHHHHHCHHHHTCCHHHHHHHHHHHHHHSCCTT-SCEEHHHHHHTTGG----------GHHHHHHHHHTTTCCCS
T ss_pred             HHHHHHHHHHhhhhhcccCHHHHHHHHHHHhcCccCCC-CccCHHHHHHHHhc----------CHHHHHHHHHHhCCCcc
Confidence            35555444433332   1223456667766  677777 77777777666442          245566666666665  


Q ss_pred             -----CCceeehHHHHHHH
Q 013259          359 -----GNGVVDYKEFQQRI  372 (447)
Q Consensus       359 -----~~g~i~~~EF~~~~  372 (447)
                           ++|.|+|+||+..+
T Consensus       198 ~~d~~~~g~i~feEF~~f~  216 (885)
T 3ohm_B          198 RSESIRPDEFSLEIFERFL  216 (885)
T ss_dssp             TTCEECGGGCCHHHHHHHH
T ss_pred             ccccCCCCcCCHHHHHHHH
Confidence                 55666666666443

>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A

Probab=96.56  E-value=0.00097  Score=70.90  Aligned_cols=53  Identities=9%  Similarity=0.008  Sum_probs=43.8

Q ss_pred             hhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHc-------CCCCCceeehHHHHHHH
Q 013259          312 FLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQA-------DIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       312 ~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~-------D~~~~g~i~~~EF~~~~  372 (447)
                      .||+|+| |.|+.+||..+|...+       ....+++++++.+       |.+++|.|+|+||+..+
T Consensus       163 ~fd~n~d-G~Is~kEl~~~l~~~~-------~~~~el~~~~~~~~~~~~k~D~~~~g~L~FeEF~~f~  222 (816)
T 3qr0_A          163 TTVEMEK-NKIPVKAIQKCLSKDK-------DDRARISKALEKIGWPSGKNDAIDLKAFDFDTFFKFY  222 (816)
T ss_dssp             HHTSCCS-SEEEHHHHHHHHCSCH-------HHHHHHHHHHHHHTSCCSTTCEEETTTCCHHHHHHHH
T ss_pred             hccCCCC-CCCCHHHHHHHHHhcC-------ChHHHHHHHHHHhcccccccccCCCCcCCHHHHHHHH
Confidence            5799999 9999999999887544       2246789999988       67788999999998655

>2qpt_A EH domain-containing protein-2; protein-nucleotide complex, membrane protein, endocytosis; HET: ANP; 3.10A {Mus musculus}

Probab=96.06  E-value=0.011  Score=60.49  Aligned_cols=64  Identities=19%  Similarity=0.227  Sum_probs=57.4

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ......++|..+| ..+ |+|+-++.+.+|.+-|       ++.+.+.++..-.|.|+||+++.+||+-+|+-
T Consensus       456 ~~~~y~~~F~~~~-~~~-g~i~g~~a~~~~~~s~-------Lp~~~L~~IW~l~D~~~~g~L~~~eF~~am~L  519 (550)
T 2qpt_A          456 DKSKYDEIFYNLA-PAD-GKLSGSKAKTWMVGTK-------LPNSVLGRIWKLSDVDRDGMLDDEEFALASHL  519 (550)
T ss_dssp             THHHHHHHHHHTC-CSS-SEECHHHHHHHHHHTT-------CCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcC-CCC-CeecHHHHHHHHHHcC-------CCHHHHHHHhcccCCCCCCcCCHHHHHHHHHH
Confidence            4567788999999 457 9999999999999877       99999999999999999999999999977754

>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}

Probab=95.63  E-value=0.0062  Score=48.85  Aligned_cols=58  Identities=12%  Similarity=0.239  Sum_probs=38.7

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccC-------CC---CCC-CCHHHHHHHHHHcCCCCC
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLT-------GH---KHG-LADEETKDLWVQADIDGN  360 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~-------~~---~~~-~~~~~~~~~~~~~D~~~~  360 (447)
                      ....+.++|+.+|.|+| |.|+.+||..+|..+-..       ..   ... -++..++++++++|.|||
T Consensus        53 ~~~~v~~~i~~~D~d~D-G~IdF~EF~~lm~~l~~~~he~f~~~~k~~~~~~~~d~~~~e~~~~~d~~gd  121 (121)
T 4drw_A           53 DPLAVDKIMKDLDQCRD-GKVGFQSFFSLIAGLTIACNDYFVVHMKQENLYFQGDSTVHEILSKLSLEGD  121 (121)
T ss_dssp             CTTHHHHHHHHHCTTCS-SCCCHHHHHHHHHHHHHHHHHHHTTSCC---------CCHHHHHHHCCC---
T ss_pred             CHHHHHHHHHHHcCCCC-CcCcHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHhcccCC
Confidence            45688999999999999 999999999888654200       00   011 123348899999998875

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=95.54  E-value=0.0031  Score=46.88  Aligned_cols=50  Identities=16%  Similarity=0.251  Sum_probs=35.6

Q ss_pred             CCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          316 DNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       316 ~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      |++ |.|+.+|  .++. ..+    ..-..++++.+|..+|.|++|.|+.+||...+.
T Consensus         1 ~~~-G~i~~~e--~~~~-~~l----~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~   50 (87)
T 1s6j_A            1 HSS-GHIDDDD--KHMA-ERL----SEEEIGGLKELFKMIDTDNSGTITFDELKDGLK   50 (87)
T ss_dssp             CCS-SSSSSHH--HHSS-SSS----CSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred             CCC-CccCccH--HHHH-HHC----CHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence            567 9999999  2221 111    111234578999999999999999999997663

>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A

Probab=95.49  E-value=0.00062  Score=55.05  Aligned_cols=32  Identities=9%  Similarity=0.073  Sum_probs=0.0

Q ss_pred             HHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHH
Q 013259          330 ALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQ  370 (447)
Q Consensus       330 ~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~  370 (447)
                      +|+.+|     .+++++++++++..+    +|.|+|+||+.
T Consensus         1 ~lr~lG-----~~~t~~ei~~~~~~~----~g~i~f~EF~~   32 (123)
T 2kld_A            1 GSTAIG-----INDTYSEVKSDLAQQ----KAEMELSDLIR   32 (123)
T ss_dssp             -----------------------------------------
T ss_pred             ChhhcC-----CCCCHHHHHHHHHHc----CCCccHHHHHh
Confidence            366778     889999999999887    78999999997

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A

Probab=94.90  E-value=0.013  Score=48.73  Aligned_cols=51  Identities=14%  Similarity=0.130  Sum_probs=35.3

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCcee
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVV  363 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i  363 (447)
                      ...++..+|+.+|.|++ |.|+.+||..++...          .+++...|+.+|.+++|.-
T Consensus        84 ~~~e~~~l~~~~D~d~d-g~I~~~eF~~~~~~~----------~~~i~~aF~~~D~d~~G~~  134 (150)
T 2jjz_A           84 THLEMKKMISEVTGGVS-DTISYRDFVNMMLGK----------RSAVLKLVMMFEGKANESS  134 (150)
T ss_dssp             CHHHHHHHHHHHHTTSC-SSBCHHHHHHHHHSS----------SCCHHHHHHC---------
T ss_pred             CHHHHHHHHHHHCCCCC-CcEeHHHHHHHHHHh----------HHHHHHHHHHHcCCCCCCC
Confidence            34578889999999999 999999999998643          2358999999999999973

>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}

Probab=94.88  E-value=0.014  Score=45.11  Aligned_cols=28  Identities=29%  Similarity=0.488  Sum_probs=24.5

Q ss_pred             HHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          346 EETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       346 ~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ++++++|+.+|.|++|.|+.+||...+.
T Consensus        36 ~el~~~F~~~D~d~~G~I~~~El~~~l~   63 (100)
T 2lv7_A           36 EEIREAFKVFDRDGNGFISKQELGTAMR   63 (100)
T ss_dssp             HHHHHHHHHTCSSCSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCcCCHHHHHHHHH
Confidence            4578889999999999999999987663

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}

Probab=94.81  E-value=0.035  Score=38.38  Aligned_cols=31  Identities=16%  Similarity=0.129  Sum_probs=27.2

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHH
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQ  333 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~  333 (447)
                      ....+..+|+.+|.|++ |.|+.+||..++..
T Consensus        34 ~~~~~~~~~~~~D~~~~-g~i~~~ef~~~~~~   64 (66)
T 3li6_A           34 NEQLLQLIFKSIDADGN-GEIDQNEFAKFYGS   64 (66)
T ss_dssp             HHHHHHHHHHHHCTTCS-SSCCHHHHHHHHTC
T ss_pred             cHHHHHHHHHHHCCCCC-CCCCHHHHHHHHHh
Confidence            44578899999999999 99999999998764

>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=94.22  E-value=0.019  Score=43.69  Aligned_cols=30  Identities=20%  Similarity=0.355  Sum_probs=25.3

Q ss_pred             HHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          345 DEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       345 ~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      .++++++|+.+|.|+||.|+.+|+...+..
T Consensus         9 ~~~~~~~F~~~D~d~dG~I~~~el~~~l~~   38 (95)
T 1c07_A            9 KAKYDEIFLKTDKDMDGFVSGLEVREIFLK   38 (95)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHT
T ss_pred             HHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            345788999999999999999999976643

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}

Probab=93.98  E-value=0.051  Score=38.12  Aligned_cols=30  Identities=20%  Similarity=0.343  Sum_probs=27.0

Q ss_pred             CCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          343 LADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       343 ~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .+.++++.+|..+|.|++|.|+.+||...+
T Consensus         3 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l   32 (71)
T 2b1u_A            3 AGLEDLQVAFRAFDQDGDGHITVDELRRAM   32 (71)
T ss_dssp             TTHHHHHHHHTTSCCSSSSEEEHHHHHHHG
T ss_pred             ccHHHHHHHHHHHCCCCCCcCcHHHHHHHH
Confidence            467889999999999999999999999655

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A

Probab=93.96  E-value=0.017  Score=47.96  Aligned_cols=51  Identities=8%  Similarity=0.084  Sum_probs=38.8

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCcee
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVV  363 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i  363 (447)
                      ...++..+|..+|.|++ |.|+.+||..++...          .+++...|+.+|.+++|..
T Consensus        82 ~~~~~~~l~~~~D~d~d-g~I~~~eF~~~~~~~----------~~~~~~aF~~~D~d~~g~~  132 (147)
T 1wy9_A           82 THLELKRLIREVSSGSE-ETFSYSDFLRMMLGK----------RSAILRMILMYEEKNKEHK  132 (147)
T ss_dssp             CHHHHHHHHHHHCSSCT-TEECHHHHHHHHCSS----------GGGGGGGGGGCCCC-----
T ss_pred             CHHHHHHHHHHhCCCCC-CcEeHHHHHHHHHHh----------HHHHHHHHHHHccCCCCCC
Confidence            34578889999999999 999999999887431          4568889999999999874

>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=93.65  E-value=0.022  Score=44.75  Aligned_cols=30  Identities=7%  Similarity=-0.077  Sum_probs=25.8

Q ss_pred             CHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          344 ADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       344 ~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ..++++++|+.+|.|+||.|+.+|+...+.
T Consensus        20 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~   49 (110)
T 1iq3_A           20 QREYYVNQFRSLQPDPSSFISGSVAKNFFT   49 (110)
T ss_dssp             SHHHHHHHHHHHCCSSSSEEEHHHHHHHCC
T ss_pred             HHHHHHHHHHHHCCCCCCeEcHHHHHHHHH
Confidence            356788899999999999999999996653

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}

Probab=93.58  E-value=0.093  Score=39.56  Aligned_cols=32  Identities=25%  Similarity=0.449  Sum_probs=28.8

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          341 HGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       341 ~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ...+.++++++|+.+|.|++|.|+.+||...+
T Consensus        24 ~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l   55 (94)
T 2kz2_A           24 DTDSEEEIREAFRVEDKDGNGYISAAELRHVM   55 (94)
T ss_dssp             CCSCHHHHHHHHHHHCTTCCSCBCHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHCCCCcCcCCHHHHHHHH
Confidence            45678899999999999999999999999766

>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*

Probab=93.50  E-value=0.051  Score=42.76  Aligned_cols=50  Identities=14%  Similarity=0.245  Sum_probs=30.6

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceee
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVD  364 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~  364 (447)
                      ...+.++|+.+|.|++ |.|+.+||..++..+.          ......+...| +++|.=.
T Consensus        55 ~~~v~~l~~~~D~d~d-G~I~f~EF~~~~~~~~----------~~~~~~f~~~~-~~~g~~~  104 (113)
T 1xk4_C           55 EKVIEHIMEDLDTNAD-KQLSFEEFIMLMARLT----------WASHEKMHEGD-EGPGHHH  104 (113)
T ss_dssp             HHHHHHHHHHHCTTCS-SSBCHHHHHHHHHHHH----------HHHHC--------------
T ss_pred             HHHHHHHHHHhCCCCC-CCEeHHHHHHHHHHHH----------HHHHHHHhhCC-CCCcccc
Confidence            4578889999999999 9999999999987643          34566777777 7777543

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}

Probab=93.47  E-value=0.055  Score=40.35  Aligned_cols=33  Identities=27%  Similarity=0.337  Sum_probs=27.5

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          341 HGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       341 ~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ..-..+++..+|+.+|.|++|.|+.+||...+.
T Consensus         4 ~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~   36 (92)
T 2kn2_A            4 DTDAEEELKEAFKVFDKDQNGYISASELRHVMI   36 (92)
T ss_dssp             CCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHCCCCCCeEcHHHHHHHHH
Confidence            334556789999999999999999999996663

>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6

Probab=93.16  E-value=0.026  Score=42.63  Aligned_cols=28  Identities=11%  Similarity=0.001  Sum_probs=23.8

Q ss_pred             HHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          346 EETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       346 ~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ++++++|+.+|.|+||.|+.+|+...+.
T Consensus         9 ~~~~~~F~~~D~d~dG~I~~~el~~~l~   36 (92)
T 1fi6_A            9 QYYVNQFKTIQPDLNGFIPGSAAKEFFT   36 (92)
T ss_dssp             HHHHHHHTTTCCSTTCEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence            3467789999999999999999997664

>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}

Probab=93.13  E-value=0.048  Score=42.81  Aligned_cols=28  Identities=11%  Similarity=0.086  Sum_probs=24.3

Q ss_pred             HHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          346 EETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       346 ~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ++++++|+.+|.|+||.|+.+||...+.
T Consensus        14 ~~l~~~F~~~D~d~dG~I~~~El~~~l~   41 (111)
T 2kgr_A           14 LKYRQLFNSHDKTMSGHLTGPQARTILM   41 (111)
T ss_dssp             HHHHHHHHTTSCSSCCEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence            4567789999999999999999997765

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5

Probab=93.03  E-value=0.072  Score=36.76  Aligned_cols=31  Identities=13%  Similarity=0.223  Sum_probs=27.3

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHH
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQ  333 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~  333 (447)
                      ....+..+|..+|.|++ |.|+.+||..++..
T Consensus        35 ~~~~~~~~~~~~D~~~d-g~i~~~ef~~~~~~   65 (67)
T 1tiz_A           35 TQEDIVKFFEEIDVDGN-GELNADEFTSCIEK   65 (67)
T ss_dssp             CHHHHHHHHHHHCCSSS-SEECHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHCCCCC-CcCcHHHHHHHHHH
Confidence            44578889999999999 99999999998864

>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A

Probab=92.89  E-value=0.042  Score=40.04  Aligned_cols=30  Identities=23%  Similarity=0.327  Sum_probs=26.2

Q ss_pred             CHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          344 ADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       344 ~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ..++++.+|..+|.|++|.|+.+||...+.
T Consensus         5 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~   34 (83)
T 1yx7_A            5 VKAELEAAFKKLDANGDGYVTALELQTFMV   34 (83)
T ss_dssp             SCTHHHHHHHHHSSSCSSSCSHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence            446789999999999999999999997663

>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10

Probab=92.84  E-value=0.065  Score=38.49  Aligned_cols=28  Identities=14%  Similarity=0.497  Sum_probs=24.7

Q ss_pred             HHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          345 DEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       345 ~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      +++++.++..+|.|++|.|+.+||...+
T Consensus         2 ~~~l~~~F~~~D~~~~G~i~~~el~~~l   29 (78)
T 1k9u_A            2 ADDMERIFKRFDTNGDGKISLSELTDAL   29 (78)
T ss_dssp             -CHHHHHHHHHCTTCSSEECHHHHHHHH
T ss_pred             hHHHHHHHHHHCCCCCCcCcHHHHHHHH
Confidence            3578999999999999999999999766

>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7

Probab=92.62  E-value=0.071  Score=40.90  Aligned_cols=46  Identities=9%  Similarity=0.002  Sum_probs=35.9

Q ss_pred             cccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          321 YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       321 ~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .++.+++...|...-      .-..+++..+|..+|.|++|.|+.+||...+
T Consensus         5 ~~~~~~~~~~l~~~~------~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l   50 (105)
T 1wlz_A            5 ATADRDILARLHKAV------TSHYHAITQEFENFDTMKTNTISREEFRAIC   50 (105)
T ss_dssp             TTCCHHHHHHHHHHH------HHTHHHHHHHHHHHCTTCSSCBCHHHHHHHH
T ss_pred             chhHHHHHHHHHHHH------HchHHHHHHHHHHHCCCCCCcCcHHHHHHHH
Confidence            455667777666531      1356789999999999999999999999766

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}

Probab=92.55  E-value=0.12  Score=36.84  Aligned_cols=29  Identities=24%  Similarity=0.462  Sum_probs=24.9

Q ss_pred             HHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          345 DEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       345 ~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      .++++.+|..+|.|++|.|+.+||...+.
T Consensus         6 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~   34 (77)
T 2joj_A            6 KQEIKEAFDLFDTNKTGSIDYHELKVAMR   34 (77)
T ss_dssp             HHHHHHHHHHHCCSSSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCCCcHHHHHHHHH
Confidence            34678899999999999999999997663

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}

Probab=92.42  E-value=0.11  Score=38.72  Aligned_cols=28  Identities=14%  Similarity=0.331  Sum_probs=24.4

Q ss_pred             HHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          346 EETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       346 ~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ++++.+|+.+|.|++|.|+.+||...+.
T Consensus        27 ~~l~~~F~~~D~d~~G~I~~~El~~~l~   54 (91)
T 2pmy_A           27 ARLRSVFAACDANRSGRLEREEFRALCT   54 (91)
T ss_dssp             HHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCCCcHHHHHHHHH
Confidence            4578899999999999999999997663

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A

Probab=92.18  E-value=0.14  Score=37.47  Aligned_cols=29  Identities=14%  Similarity=0.341  Sum_probs=24.9

Q ss_pred             HHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          345 DEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       345 ~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      .++++.+|..+|.|++|.|+.+||...+.
T Consensus        10 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~   38 (86)
T 2opo_A           10 IADRERIFKRFDTNGDGKISSSELGDALK   38 (86)
T ss_dssp             HHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCCcCHHHHHHHHH
Confidence            34578899999999999999999997663

>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A

Probab=92.00  E-value=0.15  Score=36.17  Aligned_cols=29  Identities=17%  Similarity=0.274  Sum_probs=26.1

Q ss_pred             CHHHHHHHHHHc-CCCCC-ceeehHHHHHHH
Q 013259          344 ADEETKDLWVQA-DIDGN-GVVDYKEFQQRI  372 (447)
Q Consensus       344 ~~~~~~~~~~~~-D~~~~-g~i~~~EF~~~~  372 (447)
                      +.++++.+|..+ |.|++ |.|+.+||...+
T Consensus         3 ~~~~l~~~F~~~~D~d~~~G~i~~~el~~~l   33 (76)
T 1qx2_A            3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVM   33 (76)
T ss_dssp             CHHHHHHHHHHHHTSSSCTTSEEHHHHHHHH
T ss_pred             hHHHHHHHHHHHcccCCCcCeECHHHHHHHH
Confidence            467899999999 99999 999999999666

>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A

Probab=91.72  E-value=0.1  Score=37.80  Aligned_cols=30  Identities=27%  Similarity=0.511  Sum_probs=25.4

Q ss_pred             CCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          342 GLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       342 ~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ..+.++++ +|..+|.|++|.|+.+||...+
T Consensus         5 ~~~~~~l~-~F~~~D~d~~G~i~~~el~~~l   34 (81)
T 1c7v_A            5 DDEEEILR-AFKVFDANGDGVIDFDEFKFIM   34 (81)
T ss_dssp             --CHHHHH-HHHHHSCSGGGEECHHHHHHHS
T ss_pred             ccHHHHHH-HHHHHCCCCCCcCCHHHHHHHH
Confidence            35678899 9999999999999999999655

>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...

Probab=91.32  E-value=0.16  Score=38.11  Aligned_cols=32  Identities=9%  Similarity=0.175  Sum_probs=28.0

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL  334 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~  334 (447)
                      ....+.++|+.+|.|++ |.|+.+||..++..+
T Consensus        50 ~~~~v~~~~~~~D~d~d-G~I~f~EF~~~~~~l   81 (92)
T 3rm1_A           50 EQEVVDKVMETLDSNGD-GECDFQEFMAFVAMI   81 (92)
T ss_dssp             SHHHHHHHHHHHCTTSS-SSBCHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHcCCCC-CCCcHHHHHHHHHHH
Confidence            34578899999999999 999999999988764

>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*

Probab=91.11  E-value=0.17  Score=38.15  Aligned_cols=32  Identities=13%  Similarity=0.326  Sum_probs=28.3

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL  334 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~  334 (447)
                      ....+.++++.+|.|+| |.|+.+||..++..+
T Consensus        51 ~~~ev~~~i~~~D~d~D-G~Idf~EF~~~~~~~   82 (93)
T 4eto_A           51 DEAAFQKLMSNLDSNRD-NEVDFQEYCVFLSCI   82 (93)
T ss_dssp             CHHHHHHHHHHHCTTSS-SSBCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHCCCCC-CCCcHHHHHHHHHHH
Confidence            35678999999999999 999999999988765

>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}

Probab=90.85  E-value=0.19  Score=38.87  Aligned_cols=31  Identities=13%  Similarity=0.368  Sum_probs=28.0

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQL  334 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~  334 (447)
                      ..++.++|+.+|.|+| |.|+.+||..+|..+
T Consensus        55 ~~ev~~~i~~~D~dgD-G~Idf~EF~~~m~~~   85 (104)
T 3zwh_A           55 EAAFQKLMSNLDSNRD-NEVDFQEYCVFLSSI   85 (104)
T ss_dssp             HHHHHHHHHHHCTTCS-SSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCC-CCCcHHHHHHHHHHH
Confidence            5678999999999999 999999999988765

>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A

Probab=90.74  E-value=0.19  Score=38.54  Aligned_cols=32  Identities=13%  Similarity=0.272  Sum_probs=28.7

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhc
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLN  335 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g  335 (447)
                      ..++.++|+.+|.|+| |.|+.+||..+|..+.
T Consensus        54 ~~ev~~~i~~~D~d~D-G~Idf~EF~~~m~~~~   85 (100)
T 3nxa_A           54 RKAADKLIQNLDANHD-GRISFDEYWTLIGGIT   85 (100)
T ss_dssp             HHHHHHHHHHSCCCSS-CCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCC-CCCcHHHHHHHHHHHH
Confidence            3578999999999999 9999999999988764

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A

Probab=90.53  E-value=0.23  Score=36.64  Aligned_cols=28  Identities=29%  Similarity=0.337  Sum_probs=24.2

Q ss_pred             HHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          346 EETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       346 ~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      +++..+|..+|.|++|.|+.+||...+.
T Consensus        20 ~~l~~~F~~~D~d~~G~i~~~el~~~l~   47 (90)
T 1avs_A           20 AEFKAAFDMFDADGGGDISTKELGTVMR   47 (90)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence            4577899999999999999999997663

>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A

Probab=89.95  E-value=0.24  Score=36.22  Aligned_cols=29  Identities=7%  Similarity=0.123  Sum_probs=24.7

Q ss_pred             HHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          345 DEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       345 ~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      .++++.+|..+|.|++|.|+.+||...+.
T Consensus        13 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~   41 (86)
T 1j7q_A           13 KDECMKIFDIFDRNAENIAPVSDTMDMLT   41 (86)
T ss_dssp             HHHHHHHHHHHSTTTTSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            34578899999999999999999986653

>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A

Probab=89.74  E-value=0.18  Score=38.74  Aligned_cols=31  Identities=13%  Similarity=0.249  Sum_probs=27.6

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQL  334 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~  334 (447)
                      ..++.++|+.+|.|+| |.|+.+||..++..+
T Consensus        52 ~~ev~~~i~~~D~dgD-G~Idf~EF~~~~~~~   82 (101)
T 3nso_A           52 ECDYNKFMSVLDTNKD-CEVDFVEYVRSLACL   82 (101)
T ss_dssp             HHHHHHHHHHHHHCCC-SCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCC-CCCcHHHHHHHHHHH
Confidence            4678999999999999 999999999888664

>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7

Probab=89.47  E-value=0.17  Score=38.68  Aligned_cols=31  Identities=23%  Similarity=0.377  Sum_probs=26.0

Q ss_pred             CCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          343 LADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       343 ~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ....+++.+|..+|.|+||.|+.+||...+.
T Consensus        17 ~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~   47 (103)
T 1snl_A           17 PNRFNPKTFFILHDINSDGVLDEQELEALFT   47 (103)
T ss_dssp             SCCCCHHHHHHHHCSSCCSEEEHHHHHHHHH
T ss_pred             cccCCHHHHHHHHcCCCCCcccHHHHHHHHH
Confidence            3444689999999999999999999986554

>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1

Probab=89.41  E-value=0.29  Score=34.76  Aligned_cols=30  Identities=20%  Similarity=0.310  Sum_probs=26.4

Q ss_pred             CHHHHHHHHHHcCC-CCCc-eeehHHHHHHHh
Q 013259          344 ADEETKDLWVQADI-DGNG-VVDYKEFQQRIW  373 (447)
Q Consensus       344 ~~~~~~~~~~~~D~-~~~g-~i~~~EF~~~~~  373 (447)
                      ..++++.+|..+|. |++| .|+.+||...+.
T Consensus         5 ~~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~   36 (78)
T 1cb1_A            5 SPAELKSIFEKYAAKEGDPNQLSKEELKQLIQ   36 (78)
T ss_dssp             CHHHHHHHHHHHHTTSSSTTEECHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccCCCcCEeCHHHHHHHHH
Confidence            46789999999999 9999 999999996663

>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A

Probab=89.05  E-value=0.22  Score=40.68  Aligned_cols=51  Identities=10%  Similarity=0.026  Sum_probs=35.5

Q ss_pred             CHHHHHHHHHHcCCCCCceeehHHHHHHHhccCcc--------cccccCCCccccccccc
Q 013259          344 ADEETKDLWVQADIDGNGVVDYKEFQQRIWKTTWS--------DQRNDLNDEDEDGFVKS  395 (447)
Q Consensus       344 ~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~~~~--------~~~~~~~~~~~~~~~~~  395 (447)
                      ..++++++|+.+| |+||+|+.+|+...|....+.        ...|.+..|.++-+|..
T Consensus        49 e~~~l~~~F~~fD-d~dG~Is~~El~~~l~~~gl~~~el~~I~~~~D~d~dG~Ld~~EF~  107 (139)
T 2jq6_A           49 DKPTYDEIFYTLS-PVNGKITGANAKKEMVKSKLPNTVLGKIWKLADVDKDGLLDDEEFA  107 (139)
T ss_dssp             THHHHHHHHHHSC-CSSSEEEHHHHHHHHHHTTCCHHHHHHHHHHHCSSCCSEEEHHHHH
T ss_pred             HHHHHHHHHHHhC-CCCCeECHHHHHHHHHHhCcCHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence            3567899999999 999999999999776442221        23445556666665543

>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A

Probab=88.90  E-value=0.42  Score=35.36  Aligned_cols=32  Identities=13%  Similarity=0.198  Sum_probs=28.1

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL  334 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~  334 (447)
                      ....+..+|..+|.|++ |.|+.+||..++..+
T Consensus        50 ~~~~~~~~~~~~D~d~d-g~i~~~eF~~~~~~~   81 (93)
T 1k2h_A           50 DADAVDKIMKELDENGD-GEVDFQEFVVLVAAL   81 (93)
T ss_dssp             CHHHHHHHHHHHHHCTT-SCCCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHH
Confidence            45678899999999999 999999999988764

>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A

Probab=88.80  E-value=0.59  Score=34.78  Aligned_cols=31  Identities=13%  Similarity=0.169  Sum_probs=27.4

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhc
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLN  335 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g  335 (447)
                      .++..+|+.+|.|++ |.|+.+||..++..+.
T Consensus        49 ~~~~~l~~~~D~d~d-G~I~~~EF~~~~~~~~   79 (93)
T 1xk4_A           49 KGADVWFKELDINTD-GAVNFQEFLILVIKMG   79 (93)
T ss_dssp             TCHHHHHHHHCTTCS-SSBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCC-CCCcHHHHHHHHHHHH
Confidence            577899999999999 9999999999887653

>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}

Probab=88.63  E-value=0.34  Score=37.19  Aligned_cols=28  Identities=25%  Similarity=0.489  Sum_probs=24.4

Q ss_pred             HHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          346 EETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       346 ~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ++++.+|..+|.|++|.|+.+||...+.
T Consensus        32 ~~l~~~F~~~D~d~~G~I~~~el~~~l~   59 (107)
T 2d58_A           32 EGFKEKYMEFDLNGNGDIDIMSLKRMLE   59 (107)
T ss_dssp             HHHHHHHTTSCCCTTSCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence            4578899999999999999999996663

>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE calcium entry, signaling protein; NMR {Homo sapiens}

Probab=88.61  E-value=1.1  Score=36.76  Aligned_cols=60  Identities=10%  Similarity=0.006  Sum_probs=43.5

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh-ccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL-NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~-g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ..+.++.+|+.+|.|.| |.|+.+|-..+|+.- +     ..-.. +-.   ..++. +|..|+.+|+.+..
T Consensus        13 ~~eAi~~~H~~lDdD~d-G~Id~~Es~~Flre~~~-----~~d~~-~k~---~~~h~-~D~~Isv~eLw~~W   73 (150)
T 2l5y_A           13 SLEALQTIHKQMDDDKD-GGIEVEESDEFIREDMK-----YKDAT-NKH---SHLHR-EDKHITIEDLWKRW   73 (150)
T ss_dssp             HHHHHHHHHHHHSSSCS-SCBCHHHHHHHHHHHTT-----TTCSH-HHH---HHHTT-TCCCBCHHHHHHHH
T ss_pred             hHHHHHHHHHHcCCCCC-CCCcHHHHHHHHHHHhc-----ccCch-hHH---hhhcC-CCCeeeHHHHHHHH
Confidence            44678889999999999 999999999999874 3     11122 112   23443 47899999998643

>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6

Probab=88.42  E-value=0.27  Score=37.48  Aligned_cols=31  Identities=16%  Similarity=0.243  Sum_probs=27.7

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQL  334 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~  334 (447)
                      ..++.++|+.+|.|++ |+|+.+||..+|..+
T Consensus        44 ~~~l~~i~~~~D~d~d-G~i~~~EF~~~~~~~   74 (99)
T 1qjt_A           44 DLILGKIWDLADTDGK-GVLSKQEFFVALRLV   74 (99)
T ss_dssp             HHHHHHHHHHHCCSSS-SSCCSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCC-CcCCHHHHHHHHHHH
Confidence            4578899999999999 999999999998764

>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A

Probab=88.42  E-value=0.37  Score=36.44  Aligned_cols=32  Identities=16%  Similarity=0.231  Sum_probs=28.2

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL  334 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~  334 (447)
                      ....+.++|+.+|.|++ |.|+.+||..++..+
T Consensus        47 ~~~ev~~l~~~~D~d~d-G~I~f~EF~~~~~~~   78 (96)
T 1a4p_A           47 DPLAVDKIMKDLDQCRD-GKVGFQSFFSLIAGL   78 (96)
T ss_dssp             CTTHHHHHHHHHCTTSS-SCBCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHH
Confidence            44678999999999999 999999999988764

>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A

Probab=88.19  E-value=0.36  Score=36.08  Aligned_cols=33  Identities=18%  Similarity=0.234  Sum_probs=28.5

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLN  335 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g  335 (447)
                      ....+.++|+.+|.|++ |.|+.+||..++..+.
T Consensus        48 ~~~~i~~~~~~~D~d~d-G~I~f~EF~~~~~~~~   80 (92)
T 2kax_A           48 KESSIDDLMKSLDKNSD-QEIDFKEYSVFLTMLC   80 (92)
T ss_dssp             CCTTHHHHHHHHTTTCS-SEEEHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHHH
Confidence            34578899999999999 9999999999987653

>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A

Probab=87.98  E-value=0.41  Score=35.97  Aligned_cols=33  Identities=15%  Similarity=0.194  Sum_probs=28.2

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLN  335 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g  335 (447)
                      ....+..+|..+|.|++ |.|+.+||..++..+.
T Consensus        54 ~~~~~~~l~~~~D~~~d-g~I~~~EF~~~~~~~~   86 (99)
T 1qls_A           54 DPGVLDRMMKKLDLDSD-GQLDFQEFLNLIGGLA   86 (99)
T ss_dssp             CTHHHHHHHHHHCTTCS-SSBCHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHHH
Confidence            34578889999999999 9999999999887653

>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A

Probab=87.93  E-value=0.42  Score=37.00  Aligned_cols=32  Identities=13%  Similarity=0.128  Sum_probs=27.6

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL  334 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~  334 (447)
                      ...++.++|...|.|++ |.|+.+||..+|..+
T Consensus        46 ~~~el~~i~~~~D~d~d-G~id~~EF~~~m~~~   77 (106)
T 1eh2_A           46 PVDILGRVWELSDIDHD-GMLDRDEFAVAMFLV   77 (106)
T ss_dssp             CHHHHHHHHHHHCSSCS-SBCCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHcCCCC-CcCcHHHHHHHHHHH
Confidence            34578899999999999 999999999987653

>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A

Probab=87.82  E-value=0.38  Score=36.27  Aligned_cols=32  Identities=16%  Similarity=0.198  Sum_probs=26.8

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL  334 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~  334 (447)
                      ...++.++|+.+|.|++ |.|+.+||..++..+
T Consensus        50 ~~~~v~~l~~~~D~d~d-G~I~f~EF~~~~~~~   81 (95)
T 1j55_A           50 DKDAVDKLLKDLDANGD-AQVDFSEFIVFVAAI   81 (95)
T ss_dssp             --CHHHHHHHHHCSSSS-SSEEHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhCCCCC-CcCCHHHHHHHHHHH
Confidence            34578899999999999 999999999888653

>1wlm_A Protein CGI-38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: a.39.1.11

Probab=87.46  E-value=2.1  Score=35.18  Aligned_cols=68  Identities=9%  Similarity=0.253  Sum_probs=51.8

Q ss_pred             hhHHHHhhhhcCCCCC----CcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          304 LTETDAFAFLKADNDG----DYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~----G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .+|..+|..|-.-++.    ..++-..+.++|+..++-+ ...++..++.-+|..+-..+..+|+|++|++.|
T Consensus        15 ~~L~~~F~~F~~fG~~~~~~~~M~~~~f~Kl~kD~~lid-gk~~T~tdvDiiF~KvK~k~~rkI~f~qF~~aL   86 (151)
T 1wlm_A           15 AGLEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVAD-GKAVTGTDVDIVFSKVKAKSARVINYEEFKKAL   86 (151)
T ss_dssp             CSHHHHHHHHHTSSCSSCCSSEEEHHHHHHHHHHTSCCC-SSSSCHHHHHHHHHHHSCSSCSEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHhcccCCcccccCCHHHHHHHHHHCCCCc-CCCCChhhcceehheeccCccceecHHHHHHHH
Confidence            4677777777664430    2489999999999876421 145889999999999876667899999999766

>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A

Probab=87.12  E-value=0.44  Score=35.88  Aligned_cols=32  Identities=16%  Similarity=0.273  Sum_probs=27.7

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL  334 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~  334 (447)
                      ....+.++|+.+|.|++ |.|+.+||..++..+
T Consensus        53 ~~~~v~~~~~~~D~d~d-G~I~f~EF~~~~~~~   84 (95)
T 2wcb_A           53 DKAVIDEIFQGLDANQD-EQVDFQEFISLVAIA   84 (95)
T ss_dssp             CHHHHHHHHTTSSSSTT-SEEEHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHcCCCC-CcCcHHHHHHHHHHH
Confidence            34578999999999999 999999999987653

>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A

Probab=87.11  E-value=0.43  Score=36.93  Aligned_cols=30  Identities=10%  Similarity=0.269  Sum_probs=27.1

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHh
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQL  334 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~  334 (447)
                      .++.++|+.+|.|++ |.|+.+||..++...
T Consensus        62 ~ev~~li~~~D~d~d-G~Idf~EF~~~~~~~   91 (106)
T 2h2k_A           62 GSLDEKMKSLDVNQD-SELKFNEYWRLIGEL   91 (106)
T ss_dssp             CCHHHHHHHHCTTCS-SSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCC-CCCcHHHHHHHHHHH
Confidence            678999999999999 999999999888654

>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}

Probab=87.02  E-value=0.48  Score=36.06  Aligned_cols=31  Identities=13%  Similarity=0.292  Sum_probs=27.4

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQL  334 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~  334 (447)
                      ...+.++|+.+|.|++ |.|+.+||..++...
T Consensus        52 ~~~v~~l~~~~D~d~d-G~I~f~EF~~~~~~~   82 (99)
T 2y5i_A           52 PMLVEKIMNDLDSNKD-NEVDFNEFVVLVAAL   82 (99)
T ss_dssp             HHHHHHHHHHHCTTCS-SSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCC-CcCcHHHHHHHHHHH
Confidence            4578889999999999 999999999988764

>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A

Probab=87.02  E-value=0.5  Score=37.06  Aligned_cols=32  Identities=13%  Similarity=0.326  Sum_probs=27.6

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL  334 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~  334 (447)
                      ...++.++|+.+|.|+| |.|+.+||..+|...
T Consensus        63 t~~ev~~li~~~D~dgd-G~Idf~EF~~~m~~~   94 (113)
T 2lnk_A           63 DEAAFQKLMSNLDSNRD-NEVDFQEYCVFLSCI   94 (113)
T ss_dssp             CTTHHHHHHHHHCSSSS-SCBCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhCCCCC-CcEeHHHHHHHHHHH
Confidence            34578899999999999 999999999887653

>1pul_A Hypothetical protein C32E8.3 in chromosome I; alpha helical, northeast structural genomics consortium, PSI, protein structure initiative; NMR {Caenorhabditis elegans} SCOP: a.39.1.11

Probab=87.01  E-value=2.8  Score=33.22  Aligned_cols=65  Identities=9%  Similarity=0.108  Sum_probs=48.2

Q ss_pred             hHHHHhhhhc---CCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          305 TETDAFAFLK---ADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       305 ~l~~~F~~~D---~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      +|.++|..|-   .-+. ..|+...+.++++..++- .+..+|..+++-+|..+ ..+..+|+|++|++.|
T Consensus        23 ~L~~~F~~Fa~fG~~~~-~~M~~k~f~K~~kD~~li-dgk~iT~TdvDIiF~Kv-~k~~r~I~f~qF~~aL   90 (125)
T 1pul_A           23 DVKKRWDAFTKFGAATA-TEMTGKNFDKWLKDAGVL-DNKAITGTMTGIAFSKV-TGPKKKATFDETKKVL   90 (125)
T ss_dssp             HHHHHHHHHHHHTCSSS-SCCCHHHHHHHHHHHTSC-CSSSSCHHHHHHHHHHH-TCSSSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCcc-ccCcHHHHHHHHHHCCCC-CCCCCCccccceeehcc-cCCcceecHHHHHHHH
Confidence            4444544443   3344 578999999999987642 01458999999999999 7777899999999776

>1tuz_A Diacylglycerol kinase alpha; transferase, HR532, nesgc, structural genomics, PSI, protein structure initiative; NMR {Homo sapiens} SCOP: a.39.1.7

Probab=86.85  E-value=0.28  Score=38.81  Aligned_cols=46  Identities=20%  Similarity=0.308  Sum_probs=37.9

Q ss_pred             CcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHc-C-----CCCCceeehHHHHHHH
Q 013259          320 DYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQA-D-----IDGNGVVDYKEFQQRI  372 (447)
Q Consensus       320 G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~-D-----~~~~g~i~~~EF~~~~  372 (447)
                      +.++.+||.++-+...       ++..+|++|.+.| |     ...+|.|++++|...+
T Consensus         6 s~lspe~l~~L~~~t~-------fs~~elk~~y~~F~~g~~~k~cp~G~i~~e~F~~i~   57 (118)
T 1tuz_A            6 GLISPSDFAQLQKYME-------YSTKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFL   57 (118)
T ss_dssp             SCSCHHHHHHHHHHHH-------HCCCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHH
T ss_pred             CcCCHHHHHHHHHHcc-------cCHHHHHHHHHHHccccccccCCCCCCCHHHHHHHH
Confidence            7899999999887755       7788999999999 2     3458999999998554

>4fl4_A Glycoside hydrolase family 9; structural genomics, montreal-kingston bacterial structural initiative, BSGI, dockerin; 2.80A {Clostridium thermocellum} PDB: 3p0d_A

Probab=86.35  E-value=0.53  Score=34.96  Aligned_cols=52  Identities=10%  Similarity=0.113  Sum_probs=36.0

Q ss_pred             hhhcCCCCCCcccHHHHHHHHHHh-ccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHH
Q 013259          311 AFLKADNDGDYITYSGFCEALEQL-NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ  369 (447)
Q Consensus       311 ~~~D~~~~~G~i~~~el~~~l~~~-g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~  369 (447)
                      ..=|.|+| |.|+..++..+.+-+ |.    ......  ++-+...|.|+||.|+-.++.
T Consensus        21 ~~GDvNgD-G~Vn~~D~~llk~yllg~----~~~~~~--~~~~~aADvNgDG~In~~D~~   73 (88)
T 4fl4_A           21 HMGDVNDD-GKVNSTDLTLLKRYVLKA----VSTLPS--SKAEKNADVNRDGRVNSSDVT   73 (88)
T ss_dssp             CTTCTTCS-SCCSHHHHHHHHHHHHTS----SCCCSS--HHHHHHHCTTCSSCCSHHHHH
T ss_pred             ccccCCCC-CcCCHHHHHHHHHHHcCC----CCCCch--hhhhhhccccCCCCcCHHHHH
Confidence            34589999 999999987766544 31    112111  122558899999999999886

>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A

Probab=86.30  E-value=0.58  Score=34.22  Aligned_cols=28  Identities=14%  Similarity=0.200  Sum_probs=24.3

Q ss_pred             HHHHHHHHHcC-CCCCc-eeehHHHHHHHh
Q 013259          346 EETKDLWVQAD-IDGNG-VVDYKEFQQRIW  373 (447)
Q Consensus       346 ~~~~~~~~~~D-~~~~g-~i~~~EF~~~~~  373 (447)
                      +++..+|..+| .|++| .|+.+||...+.
T Consensus        10 ~~l~~~F~~~D~~d~~G~~i~~~el~~~l~   39 (90)
T 1k8u_A           10 GLLVAIFHKYSGREGDKHTLSKKELKELIQ   39 (90)
T ss_dssp             HHHHHHHHHHHTSSSCTTEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHhccCCCCCcCCHHHHHHHHH
Confidence            46888999999 59999 999999986664

>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A

Probab=86.05  E-value=0.36  Score=36.82  Aligned_cols=32  Identities=22%  Similarity=0.309  Sum_probs=27.5

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL  334 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~  334 (447)
                      ....+.++|+.+|.|++ |.|+.+||..+|...
T Consensus        50 ~~~ev~~l~~~~D~d~d-G~I~f~EF~~~~~~~   81 (100)
T 1psr_A           50 GTNYLADVFEKKDKNED-KKIDFSEFLSLLGDI   81 (100)
T ss_dssp             TCCGGGTHHHHHCTTCS-SCBCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHH
Confidence            34578889999999999 999999999988653

>1sra_A Sparc; extracellular matrix protein, calcium-binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.3

Probab=86.04  E-value=0.38  Score=39.72  Aligned_cols=29  Identities=24%  Similarity=0.359  Sum_probs=25.7

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHH
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEAL  331 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l  331 (447)
                      ...-+..+|..+|.|+| |.||.+|+..+|
T Consensus       110 ~e~cv~~ff~~cD~d~D-g~ISl~Ew~~Cl  138 (151)
T 1sra_A          110 MEHCTTRFFETCDLDND-KYIALDEWAGCF  138 (151)
T ss_dssp             TGGGHHHHHHHHCTTCS-SSEEHHHHHHHT
T ss_pred             hHHHHHHHHHHhCCCCC-CcCCHHHHHHHh
Confidence            44567889999999999 999999999985

>2jrf_A Tubulin polymerization-promoting protein family member 3; solution structure, structural genomics, PSI-2, protein structure initiative; NMR {Homo sapiens}

Probab=85.26  E-value=2.9  Score=35.52  Aligned_cols=69  Identities=9%  Similarity=0.222  Sum_probs=52.9

Q ss_pred             hhhHHHHhhhhcCCCCC----CcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          303 SLTETDAFAFLKADNDG----DYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~----G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ..+|..+|..|-.-++.    ..++-..|..+|+..+|-+ +..++..+++-+|..+-..+..+|+|++|++.|
T Consensus         7 ~~~L~~~F~~F~~fG~~~~~~~eMd~~~F~KlcKD~~liD-gk~~T~tdvDIiF~KvK~k~~rkI~feqF~~aL   79 (184)
T 2jrf_A            7 IAGLEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVAD-GKSVTGTDVDIVFSKVKGKSARVINYEEFKKAL   79 (184)
T ss_dssp             CSHHHHHHHHHHSSSCTTSTTSEEEHHHHHHHHHHTTCCC-SSSSCHHHHHHHHHHHCCSCCSEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCCccccCcHHHHHHHHHHcCCcc-CCCCChhhcchhhheeccCcceeecHHHHHHHH
Confidence            34677778777764440    2599999999999876421 155889999999999976777899999999766

>4dh2_B Dockerin type 1; cellulosome, cohesin, type I cohesin-dockerin, Pro protein interaction, cell adhesion; 1.75A {Clostridium thermocellum}

Probab=83.63  E-value=0.49  Score=34.69  Aligned_cols=48  Identities=15%  Similarity=0.290  Sum_probs=34.9

Q ss_pred             cCCCCCCcccHHHHHHHHHHh-ccCCCCCCC-CHHHHHHHHHHcCCCCCceeehHHHH
Q 013259          314 KADNDGDYITYSGFCEALEQL-NLTGHKHGL-ADEETKDLWVQADIDGNGVVDYKEFQ  369 (447)
Q Consensus       314 D~~~~~G~i~~~el~~~l~~~-g~~~~~~~~-~~~~~~~~~~~~D~~~~g~i~~~EF~  369 (447)
                      |.|+| |.|+..++.-+.+-+ |.   ...+ ++.    -+...|.|+||.|+-.+|.
T Consensus         9 DvN~D-G~Vn~~D~~llk~yllg~---~~~~~~~~----~~~~ADvngDG~In~~D~~   58 (82)
T 4dh2_B            9 DVNAD-GVVNISDYVLMKRYILRI---IADFPADD----DMWVGDVNGDNVINDIDCN   58 (82)
T ss_dssp             CTTCS-SSCSHHHHHHHHHHHTTS---SSSCSSSC----HHHHHCSSSSSCCSHHHHH
T ss_pred             ccCCC-CcCCHHHHHHHHHHHcCC---CccCcccc----chhheeccCCCcCCHHHHH
Confidence            78999 999999998777654 41   0111 211    2458899999999999987

>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A

Probab=83.13  E-value=0.9  Score=36.01  Aligned_cols=32  Identities=16%  Similarity=0.238  Sum_probs=28.2

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL  334 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~  334 (447)
                      ....|.+++...|.|++ |+|+.+||..+|..+
T Consensus        64 p~~~L~~Iw~laD~d~d-G~Ld~~EF~~aM~Li   95 (121)
T 3fia_A           64 PQPVLAQIWALADMNND-GRMDQVEFSIAMKLI   95 (121)
T ss_dssp             CHHHHHHHHHHHCTTCS-SEECHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHcCCCC-CcCCHHHHHHHHHHH
Confidence            45678999999999999 999999999998654

>2kav_A Sodium channel protein type 2 subunit alpha; voltage-gated sodium channel, alternative splicing, disease epilepsy, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kbi_A

Probab=80.59  E-value=2.1  Score=34.19  Aligned_cols=70  Identities=9%  Similarity=0.147  Sum_probs=48.9

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCH-HHHHHHHHHcCCC--CCceeehHHHHHHHhccCc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLAD-EETKDLWVQADID--GNGVVDYKEFQQRIWKTTW  377 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~-~~~~~~~~~~D~~--~~g~i~~~EF~~~~~~~~~  377 (447)
                      ......+++..||.++. |+|+..+|..++..+.   .+..+.. ..+ . +..+|.-  .+|+|-|.+.+.++.++.+
T Consensus        41 dl~~F~~~W~~fDP~aT-g~I~~~~L~~ll~~L~---pPLgi~kpnr~-~-L~~mniPl~~g~~Vhf~dvL~ALtr~vl  113 (129)
T 2kav_A           41 DFEMFYEVWEKFDPDAT-QFIEFAKLSDFADALD---PPLLIAKPNKV-Q-LIAMDLPMVSGDRIHCLDILFAFTKRVL  113 (129)
T ss_dssp             HHHHHHHHHHHHCTTCC-CEECGGGHHHHHHHSC---TTSCCCTTCCH-H-HHHTCCCEETTTEEEHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHhcCCCCc-eEEeHHHHHHHHHhCC---ccccCCCccHH-H-HHHcCCccCCCCEEeHHHHHHHHHHHHh
Confidence            44566778999999999 9999999999999874   1111111 111 2 3356654  5679999999977766655

>2k60_A Protein (stromal interaction molecule 1); EF-hand, SAM domain, EF-SAM, STIM1, store operated calcium entry regulator, SOCE; NMR {Homo sapiens}

Probab=80.50  E-value=0.85  Score=37.43  Aligned_cols=58  Identities=9%  Similarity=0.037  Sum_probs=42.4

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHH-hccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHH
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQ-LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQR  371 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~  371 (447)
                      .+.++.+|+.+|.|.+ |.|+..|-..+|+. +.     ..-... -.   ..|.. +|..|+.+|+...
T Consensus        14 ~eAi~~lH~~lDdD~d-G~Id~~Es~~flredl~-----~~d~~~-~~---~~fh~-~D~~Isv~eLw~~   72 (150)
T 2k60_A           14 FEAVRNIHKLMDDDAN-GDVDVEESDEFLREDLN-----YHDPTV-KH---STFHG-EDKLISVEDLWKA   72 (150)
T ss_dssp             HHHHHHHHHTTCTTCS-SEECTTTTTTHHHHHTT-----SSCTHH-HH---HHHTS-SSCCEEHHHHHHH
T ss_pred             hHHHHHHHHhcCCCCC-CcccHHHHHHHHHHHhc-----cccchh-hh---hcccC-CCCeeeHHHHHHH
Confidence            3578889999999999 99999999999976 33     211122 22   34444 5789999999854

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	447
d1pvaa_	109	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	1e-09
d1pvaa_	109	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	0.003
d5pala_	109	a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis	4e-09
d5pala_	109	a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis	1e-04
d1c7va_	68	a.39.1.5 (A:) Calcium vector protein {Amphioxus (B	5e-08
d1rroa_	108	a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus)	6e-08
d1rroa_	108	a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus)	3e-04
d2pvba_	107	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	7e-08
d2pvba_	107	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	7e-05
d1rwya_	109	a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [Ta	1e-07
d1a4pa_	92	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	3e-07
d1ij5a_	321	a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind	5e-07
d1oqpa_	77	a.39.1.5 (A:) Caltractin (centrin 2) {Green algae	7e-07
d3c1va1	93	a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sa	1e-06
d1s6ja_	87	a.39.1.5 (A:) Calcium-dependent protein kinase sk5	1e-06
d1ksoa_	93	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	2e-06
d1zfsa1	93	a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus no	2e-06
d1juoa_	172	a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId:	2e-06
d1k94a_	165	a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta	2e-06
d1xo5a_	180	a.39.1.5 (A:) Calcium- and integrin-binding protei	3e-06
d1qx2a_	76	a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [Tax	8e-06
d2fcea1	61	a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [	9e-06
d2opoa1	81	a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Che	1e-05
d1avsa_	81	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	2e-05
d1fw4a_	65	a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId:	4e-05
d1tiza_	67	a.39.1.5 (A:) Calmodulin-related protein T21P5.17	5e-05
d1yuta1	98	a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sa	6e-05
d1cb1a_	78	a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [Tax	6e-05
d1zwxa1	293	d.151.1.3 (A:41-333) Sphingomyelin phosphodiestera	1e-04
d1dtla_	156	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	2e-04
d1f54a_	77	a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom	3e-04
d1wrka1	82	a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens)	4e-04
d1psra_	100	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	5e-04
d1fi5a_	81	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus),	6e-04
d1qxpa2	188	a.39.1.8 (A:515-702) Calpain large subunit, C-term	6e-04
d1qxpa2	188	a.39.1.8 (A:515-702) Calpain large subunit, C-term	0.004
d1jc2a_	75	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	0.001
d2obha1	141	a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapien	0.001
d1k8ua_	89	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	0.001
d1xk4a1	87	a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sa	0.002
d2pq3a1	73	a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [T	0.002
d1fpwa_	190	a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1	0.002
d1topa_	162	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	0.002
d1topa_	162	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	0.004
d2jxca1	95	a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [	0.003
d1g8ia_	187	a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1	0.003
d1exra_	146	a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetr	0.004
d1wlza1	83	a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {H	0.004

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 53.0 bits (127), Expect = 1e-09
 Identities = 20/81 (24%), Positives = 29/81 (35%), Gaps = 4/81 (4%)

Query: 292 FGMFKCLLRRASLTETDA-FAFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETK 349
              F  L+   +++  D    F   D D   +I        L+     G      D ETK
Sbjct: 26  HKKFFALVGLKAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLT--DAETK 83

Query: 350 DLWVQADIDGNGVVDYKEFQQ 370
                AD DG+G +   EF+ 
Sbjct: 84  AFLKAADKDGDGKIGIDEFET 104

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 34.9 bits (80), Expect = 0.003
 Identities = 14/99 (14%), Positives = 30/99 (30%), Gaps = 16/99 (16%)

Query: 304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVV 363
           L   D    L A        +  F   +           ++  + K ++   D D +G +
Sbjct: 6   LKADDIKKALDAVKAEGSFNHKKFFALV-------GLKAMSANDVKKVFKAIDADASGFI 58

Query: 364 DYKEFQQRIWKTTWSDQRNDLN---------DEDEDGFV 393
           + +E +  +       +              D+D DG +
Sbjct: 59  EEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKI 97

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

 Score = 51.9 bits (124), Expect = 4e-09
 Identities = 20/81 (24%), Positives = 29/81 (35%), Gaps = 4/81 (4%)

Query: 292 FGMFKCLLRRASLTETD-AFAFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETK 349
           +  F  L+     T+      F   D D   +I        L+  +  G    L D ETK
Sbjct: 26  YKRFFHLVGLKGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRD--LNDTETK 83

Query: 350 DLWVQADIDGNGVVDYKEFQQ 370
            L    D D +G +   EF +
Sbjct: 84  ALLAAGDSDHDGKIGADEFAK 104

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

 Score = 39.2 bits (91), Expect = 1e-04
 Identities = 17/99 (17%), Positives = 33/99 (33%), Gaps = 16/99 (16%)

Query: 304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVV 363
           L   D    + A  D     Y  F   +          G  D + K+++   D D +G +
Sbjct: 6   LKADDINKAISAFKDPGTFDYKRFFHLV-------GLKGKTDAQVKEVFEILDKDQSGFI 58

Query: 364 DYKEFQQRIWKTTWSDQRNDLN---------DEDEDGFV 393
           + +E +  +   +   +  +           D D DG +
Sbjct: 59  EEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKI 97

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 68

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

 Score = 47.5 bits (113), Expect = 5e-08
 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 5/68 (7%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
            AF    A+ DG  I +  F   ++++     +  L D E ++   +AD DGNGV+D  E
Sbjct: 6   RAFKVFDANGDG-VIDFDEFKFIMQKVG----EEPLTDAEVEEAMKEADEDGNGVIDIPE 60

Query: 368 FQQRIWKT 375
           F   I K+
Sbjct: 61  FMDLIKKS 68

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 108

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 48.4 bits (115), Expect = 6e-08
 Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 4/81 (4%)

Query: 292 FGMFKCLLRRASLTETDA-FAFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETK 349
              F      + ++ +     F   DND   Y+        L++      +  L + ETK
Sbjct: 26  PQKFFQTSGLSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARE--LTESETK 83

Query: 350 DLWVQADIDGNGVVDYKEFQQ 370
            L   AD DG+G +   EFQ+
Sbjct: 84  SLMDAADNDGDGKIGADEFQE 104

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 108

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 38.0 bits (88), Expect = 3e-04
 Identities = 19/99 (19%), Positives = 34/99 (34%), Gaps = 16/99 (16%)

Query: 304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVV 363
           L+  D  A L+   D D      F +             ++  + KD++   D D +G +
Sbjct: 6   LSAEDIAAALQECQDPDTFEPQKFFQTS-------GLSKMSASQVKDIFRFIDNDQSGYL 58

Query: 364 DYKEFQQRIWKTTWSDQRNDLN---------DEDEDGFV 393
           D  E +  + K     +    +         D D DG +
Sbjct: 59  DGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKI 97

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 48.4 bits (115), Expect = 7e-08
 Identities = 21/81 (25%), Positives = 30/81 (37%), Gaps = 4/81 (4%)

Query: 292 FGMFKCLLRRASLTETD-AFAFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETK 349
              F   +  AS +  D   AF   D D   +I        L+  + +     L D ETK
Sbjct: 25  HKEFFAKVGLASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARA--LTDAETK 82

Query: 350 DLWVQADIDGNGVVDYKEFQQ 370
                 D DG+G++   EF  
Sbjct: 83  AFLADGDKDGDGMIGVDEFAA 103

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 39.9 bits (93), Expect = 7e-05
 Identities = 18/101 (17%), Positives = 35/101 (34%), Gaps = 16/101 (15%)

Query: 302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNG 361
           A L + D  A L A +  D   +  F   +            + ++ K  +   D D +G
Sbjct: 3   AGLKDADVAAALAACSAADSFKHKEFFAKV-------GLASKSLDDVKKAFYVIDQDKSG 55

Query: 362 VVDYKEFQQRIWKTTWSDQRNDLN---------DEDEDGFV 393
            ++  E +  +   + S +              D+D DG +
Sbjct: 56  FIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMI 96

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

 Score = 47.7 bits (113), Expect = 1e-07
 Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 4/86 (4%)

Query: 292 FGMFKCLLRRASLTETDA-FAFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETK 349
              F  ++     +  D    F   D D   +I        L+  +       L+ +ETK
Sbjct: 26  HKKFFQMVGLKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARD--LSAKETK 83

Query: 350 DLWVQADIDGNGVVDYKEFQQRIWKT 375
            L    D DG+G +  +EF   + ++
Sbjct: 84  TLMAAGDKDGDGKIGVEEFSTLVAES 109

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} Length = 92

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]

 Score = 46.1 bits (109), Expect = 3e-07
 Identities = 15/71 (21%), Positives = 24/71 (33%)

Query: 306 ETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDY 365
           ET  F F K   D  Y+T       +E+      ++         +    D   +G V +
Sbjct: 9   ETMMFTFHKFAGDKGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGF 68

Query: 366 KEFQQRIWKTT 376
           + F   I   T
Sbjct: 69  QSFFSLIAGLT 79

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

 Score = 48.9 bits (115), Expect = 5e-07
 Identities = 21/152 (13%), Positives = 52/152 (34%), Gaps = 5/152 (3%)

Query: 219 DWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNK 278
           + +   R      +     +++     +  D +++  +S +  R +   + F      + 
Sbjct: 168 ENDTKGRMSYITLVAVANDLAALVADFRKIDTNSNGTLSRKEFREHFVRLGFDKKSVQDA 227

Query: 279 YRKLLKASWSEAVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTG 338
             +      S+ V       L    L     +AF   D  G  ++     + LE  ++  
Sbjct: 228 LFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFDKSG-QLSKEEVQKVLEDAHI-- 284

Query: 339 HKHGLADEETKDLWVQADIDGNGVVDYKEFQQ 370
                A ++ +  +   D+D +  + Y+EF  
Sbjct: 285 --PESARKKFEHQFSVVDVDDSKSLSYQEFVM 314

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

 Score = 44.5 bits (105), Expect = 7e-07
 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 6/69 (8%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
            AF     DN G  IT        ++L        L +EE +++  +AD + +  +D  E
Sbjct: 13  KAFRLFDDDNSG-TITIKDLRRVAKELG-----ENLTEEELQEMIAEADRNDDNEIDEDE 66

Query: 368 FQQRIWKTT 376
           F + + KT+
Sbjct: 67  FIRIMKKTS 75

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} Length = 93

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

 Score = 44.5 bits (105), Expect = 1e-06
 Identities = 10/62 (16%), Positives = 22/62 (35%), Gaps = 1/62 (1%)

Query: 308 DAF-AFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYK 366
             F  +   + D   +  S   E L +   +       +   + L    D + +  VD++
Sbjct: 13  STFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQ 72

Query: 367 EF 368
           E+
Sbjct: 73  EY 74

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 87

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

 Score = 44.2 bits (104), Expect = 1e-06
 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 6/61 (9%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
           + F  +  DN G  IT+    + L++         L + E KDL   ADID +G +DY E
Sbjct: 27  ELFKMIDTDNSG-TITFDELKDGLKR-----VGSELMESEIKDLMDAADIDKSGTIDYGE 80

Query: 368 F 368
           F
Sbjct: 81  F 81

>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} Length = 93

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a3 [TaxId: 9606]

 Score = 44.1 bits (104), Expect = 2e-06
 Identities = 8/53 (15%), Positives = 18/53 (33%)

Query: 316 DNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 368
             D   +  +   E L++   T       + +        D + +  VD+ E+
Sbjct: 22  CGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEY 74

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} Length = 93

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

 Score = 43.8 bits (103), Expect = 2e-06
 Identities = 12/69 (17%), Positives = 27/69 (39%), Gaps = 3/69 (4%)

Query: 311 AFLK-ADNDGD--YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
            F   +  +GD   ++     + L+    +        +    +  + D +G+G VD++E
Sbjct: 14  VFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQE 73

Query: 368 FQQRIWKTT 376
           F   +   T
Sbjct: 74  FVVLVAALT 82

>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} Length = 172

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Sorcin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (107), Expect = 2e-06
 Identities = 16/85 (18%), Positives = 24/85 (28%)

Query: 312 FLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQR 371
           F         I        L Q  + G       E  + +    D D +G + + EF++ 
Sbjct: 13  FAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKEL 72

Query: 372 IWKTTWSDQRNDLNDEDEDGFVKSS 396
                   Q     D D  G V   
Sbjct: 73  WAVLNGWRQHFISFDTDRSGTVDPQ 97

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (106), Expect = 2e-06
 Identities = 15/82 (18%), Positives = 27/82 (32%), Gaps = 1/82 (1%)

Query: 315 ADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK 374
           A  DG  +        L Q  + G     + E  + +    D D  G + +  F++    
Sbjct: 10  AGQDG-EVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAA 68

Query: 375 TTWSDQRNDLNDEDEDGFVKSS 396
                +     D+D  G V+  
Sbjct: 69  LNAWKENFMTVDQDGSGTVEHH 90

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} Length = 180

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (107), Expect = 3e-06
 Identities = 21/92 (22%), Positives = 34/92 (36%), Gaps = 5/92 (5%)

Query: 289 EAVFGMFKCLLRRASLTETDAFAFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEE 347
           E    +       A+      +AF   D D D  +        +  L   G    L+  E
Sbjct: 78  EDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASE 137

Query: 348 TKDL----WVQADIDGNGVVDYKEFQQRIWKT 375
            K L      ++DID +G ++  EFQ  I ++
Sbjct: 138 MKQLIDNILEESDIDRDGTINLSEFQHVISRS 169

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} Length = 76

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 41.5 bits (97), Expect = 8e-06
 Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 4/70 (5%)

Query: 308 DAF-AFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYK 366
            AF  F   + D + I+       ++ L   G           ++  + D +G+G V ++
Sbjct: 9   GAFEVFAAKEGDPNQISKEELKLVMQTL---GPSLLKGMSTLDEMIEEVDKNGDGEVSFE 65

Query: 367 EFQQRIWKTT 376
           EF   + K +
Sbjct: 66  EFLVMMKKIS 75

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 61

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 40.8 bits (95), Expect = 9e-06
 Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 6/61 (9%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
            AF     ++ G  ++       L  L        L D E  +L    ++D NG +DYK+
Sbjct: 5   KAFQVFDKESTG-KVSVGDLRYMLTGLG-----EKLTDAEVDELLKGVEVDSNGEIDYKK 58

Query: 368 F 368
           F
Sbjct: 59  F 59

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

 Score = 41.5 bits (97), Expect = 1e-05
 Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 7/63 (11%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
             F     + DG  I+ S   +AL+ L        +  +E + +  + D DG+G + + E
Sbjct: 10  RIFKRFDTNGDG-KISSSELGDALKTL------GSVTPDEVRRMMAEIDTDGDGFISFDE 62

Query: 368 FQQ 370
           F  
Sbjct: 63  FTD 65

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 40.3 bits (94), Expect = 2e-05
 Identities = 19/74 (25%), Positives = 28/74 (37%), Gaps = 12/74 (16%)

Query: 301 RASLTE------TDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQ 354
           RA L+E        AF    AD  G  I+       +              EE   +  +
Sbjct: 5   RAFLSEEMIAEFKAAFDMFDADGGG-DISTKELGTVMRM-----LGQNPTKEELDAIIEE 58

Query: 355 ADIDGNGVVDYKEF 368
            D DG+G +D++EF
Sbjct: 59  VDEDGSGTIDFEEF 72

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 65

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 39.2 bits (91), Expect = 4e-05
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 6/63 (9%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
           +AF     D +G YI+ +     +  L        L DEE  ++  +ADIDG+G V+Y+E
Sbjct: 7   EAFRVFDKDGNG-YISAAELRHVMTNLG-----EKLTDEEVDEMIREADIDGDGQVNYEE 60

Query: 368 FQQ 370
           F Q
Sbjct: 61  FVQ 63

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 39.2 bits (91), Expect = 5e-05
 Identities = 15/67 (22%), Positives = 24/67 (35%), Gaps = 6/67 (8%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
             F     + DG  ++   F E                E+    + + D+DGNG ++  E
Sbjct: 5   RVFEKFDKNKDG-KLSLDEFREVALA-----FSPYFTQEDIVKFFEEIDVDGNGELNADE 58

Query: 368 FQQRIWK 374
           F   I K
Sbjct: 59  FTSCIEK 65

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} Length = 98

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a13 [TaxId: 9606]

 Score = 39.5 bits (92), Expect = 6e-05
 Identities = 8/61 (13%), Positives = 20/61 (32%), Gaps = 6/61 (9%)

Query: 311 AFLK-ADNDGD--YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
            F   A  +G    ++ + F E + Q                +     D++ +  + + E
Sbjct: 19  TFFTFARQEGRKDSLSVNEFKELVTQQ---LPHLLKDVGSLDEKMKSLDVNQDSELKFNE 75

Query: 368 F 368
           +
Sbjct: 76  Y 76

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} Length = 78

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 39.0 bits (91), Expect = 6e-05
 Identities = 12/70 (17%), Positives = 28/70 (40%), Gaps = 4/70 (5%)

Query: 308 DAF-AFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYK 366
             F  +   + D + ++     + ++                 DL+ + D +G+G V ++
Sbjct: 11  SIFEKYAAKEGDPNQLSKEELKQLIQAE---FPSLLKGPRTLDDLFQELDKNGDGEVSFE 67

Query: 367 EFQQRIWKTT 376
           EFQ  + K +
Sbjct: 68  EFQVLVKKIS 77

>d1zwxa1 d.151.1.3 (A:41-333) Sphingomyelin phosphodiesterase C {Listeria ivanovii [TaxId: 1638]} Length = 293

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: Sphingomyelin phosphodiesterase-like
domain: Sphingomyelin phosphodiesterase C
species: Listeria ivanovii [TaxId: 1638]

 Score = 41.5 bits (95), Expect = 1e-04
 Identities = 26/223 (11%), Positives = 60/223 (26%), Gaps = 13/223 (5%)

Query: 61  WFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLARTNNRGDGL 120
              R   I      + + ++ L E +  +          L +       +   +  G   
Sbjct: 25  QMHRADLIAQADYMKNNDVVILNEAF--DTSASHRLLNNLREMYPHQTPVIGRSKHGWDK 82

Query: 121 LTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLR-------QEILIV 173
               + ++        ++        +Q +             G          +   I+
Sbjct: 83  TEGNYSNFALEDGGVAVVSQWPIVEKSQHIFQRGGGADRLSNKGFAYVKIMKNGKPYHII 142

Query: 174 NTHLLFPH-DSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFL 232
            TH        S    R  +  ++ +      K++  K   I + GD N +     Y  +
Sbjct: 143 GTHTQADDSLISKDTSRAIRAEQMQEIQTFIAKKNIPKDEIIFIGGDLNVNYGTDEYHDM 202

Query: 233 RSQGFVSSYDTAHQYT---DADAHKWVSHRNHRGNICGVDFIW 272
                VSS    +      D   +  +     +     +D+I+
Sbjct: 203 LKLLNVSSPANFNGQMATWDPTTNSMLKESYPKAAPEYLDYIF 245

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 156

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 39.2 bits (90), Expect = 2e-04
 Identities = 18/136 (13%), Positives = 46/136 (33%), Gaps = 15/136 (11%)

Query: 236 GFVSSYDTAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMF 295
           G +S+ +          +          +    D    ++ +++  ++  S  +   G  
Sbjct: 30  GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKS 89

Query: 296 KCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNL-TGHKHGLADEETKDLWVQ 354
           +  L            F   D + D     G+ +  E   +       + +++ ++L   
Sbjct: 90  EEELSDL---------FRMFDKNAD-----GYIDLEELKIMLQATGETITEDDIEELMKD 135

Query: 355 ADIDGNGVVDYKEFQQ 370
            D + +G +DY EF +
Sbjct: 136 GDKNNDGRIDYDEFLE 151

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 77

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.3 bits (86), Expect = 3e-04
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 6/61 (9%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
           +AFA    DN+G  I+ S     +  L         ++ E  DL  + D+DGN  +++ E
Sbjct: 14  EAFALFDKDNNG-SISSSELATVMRSLG-----LSPSEAEVNDLMNEIDVDGNHQIEFSE 67

Query: 368 F 368
           F
Sbjct: 68  F 68

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 82

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

 Score = 36.9 bits (85), Expect = 4e-04
 Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 5/61 (8%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
            AF       +   I+     + +              EE +++  + D DG+G VD+ E
Sbjct: 19  AAFDIFVLGAEDGSISTKELGKVMRM-----LGQNPTPEELQEMIDEVDEDGSGTVDFDE 73

Query: 368 F 368
           F
Sbjct: 74  F 74

>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} Length = 100

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]

 Score = 37.3 bits (86), Expect = 5e-04
 Identities = 10/59 (16%), Positives = 20/59 (33%), Gaps = 2/59 (3%)

Query: 312 FLKADNDGDYITYSGFCEALEQL--NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 368
           F K     D I        +++   N              D++ + D + +  +D+ EF
Sbjct: 16  FHKYTRRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEF 74

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

 Score = 36.5 bits (84), Expect = 6e-04
 Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 6/63 (9%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
           D F     + DG YI        L+    T  +      + ++L    D + +G +DY E
Sbjct: 19  DLFRMFDKNADG-YIDLEELKIMLQATGETITED-----DIEELMKDGDKNNDGRIDYDE 72

Query: 368 FQQ 370
           F +
Sbjct: 73  FLE 75

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

 Score = 38.5 bits (89), Expect = 6e-04
 Identities = 17/89 (19%), Positives = 28/89 (31%), Gaps = 3/89 (3%)

Query: 311 AFLKADNDGDYITYSGFCEALEQLNLTGHKH---GLADEETKDLWVQADIDGNGVVDYKE 367
            F K   D   I+       L ++          G + E  + +    D DGNG +   E
Sbjct: 25  LFSKLAGDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVE 84

Query: 368 FQQRIWKTTWSDQRNDLNDEDEDGFVKSS 396
           F     +           D D+ G + + 
Sbjct: 85  FNILWNRIRNYLTIFRKFDLDKSGSMSAY 113

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

 Score = 36.2 bits (83), Expect = 0.004
 Identities = 14/91 (15%), Positives = 30/91 (32%), Gaps = 7/91 (7%)

Query: 316 DNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK 374
           D D    ++      A+E              +   + V    D   ++D+  F + + +
Sbjct: 103 DLDKSGSMSAYEMRMAIEAAGFK------LPCQLHQVIVARFADDELIIDFDNFVRCLVR 156

Query: 375 TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSV 405
                +     D +  G ++  L   + FSV
Sbjct: 157 LEILFKIFKQLDPENTGTIQLDLISWLSFSV 187

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 35.7 bits (82), Expect = 0.001
 Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 6/61 (9%)

Query: 308 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 367
           + F     + DG +I      E      L      + +E+ +DL   +D + +G +D+ E
Sbjct: 13  NCFRIFDKNADG-FIDIEELGE-----ILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDE 66

Query: 368 F 368
           F
Sbjct: 67  F 67

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} Length = 141

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.2 bits (85), Expect = 0.001
 Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 6/78 (7%)

Query: 294 MFKCLLRRASLTETDAFAFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLW 352
           +    +      E    AF   D+D    I++       ++L        L DEE +++ 
Sbjct: 67  VMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG-----ENLTDEELQEMI 121

Query: 353 VQADIDGNGVVDYKEFQQ 370
            +AD DG+G V  +EF +
Sbjct: 122 DEADRDGDGEVSEQEFLR 139

>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} Length = 89

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a6 [TaxId: 9606]

 Score = 35.6 bits (82), Expect = 0.001
 Identities = 10/70 (14%), Positives = 24/70 (34%), Gaps = 3/70 (4%)

Query: 308 DAF-AFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYK 366
             F  +   + D   ++     E +++         L D E   L    D + +  V+++
Sbjct: 13  AIFHKYSGREGDKHTLSKKELKELIQKEL--TIGSKLQDAEIARLMEDLDRNKDQEVNFQ 70

Query: 367 EFQQRIWKTT 376
           E+   +    
Sbjct: 71  EYVTFLGALA 80

>d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} Length = 87

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]

 Score = 35.2 bits (81), Expect = 0.002
 Identities = 12/67 (17%), Positives = 29/67 (43%), Gaps = 3/67 (4%)

Query: 311 AFLK-ADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 369
            + K +   G++       + L++L  T     +  +     + + DI+ +G V+++EF 
Sbjct: 15  VYHKYSLIKGNFHAVY--RDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFL 72

Query: 370 QRIWKTT 376
             + K  
Sbjct: 73  ILVIKMG 79

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} Length = 73

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

 Score = 35.0 bits (80), Expect = 0.002
 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 6/59 (10%)

Query: 311 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 368
           AF   D DGD  IT       +  L          + E +D+  + D DGNG +D+ EF
Sbjct: 13  AFSLFDKDGDGTITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPEF 66

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 190

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.7 bits (84), Expect = 0.002
 Identities = 13/92 (14%), Positives = 30/92 (32%), Gaps = 8/92 (8%)

Query: 286 SWSEAVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLN-------LTG 338
            + E +  +            + AF     ++DG YIT+      +  +           
Sbjct: 81  HFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDG-YITFDEMLTIVASVYKMMGSMVTLN 139

Query: 339 HKHGLADEETKDLWVQADIDGNGVVDYKEFQQ 370
                 +   K ++   D + +G +   EF++
Sbjct: 140 EDEATPEMRVKKIFKLMDKNEDGYITLDEFRE 171

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 162

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 36.5 bits (83), Expect = 0.002
 Identities = 16/121 (13%), Positives = 37/121 (30%), Gaps = 9/121 (7%)

Query: 251 DAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKCLLRRASLTETDAF 310
              + +     +  +  +      + +             +         +    E  A 
Sbjct: 44  TVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF---EEFLVMMVRQMKEDAKGKSEEELAN 100

Query: 311 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 369
            F   D + D +I      E L           + +E+ +DL   +D + +G +D+ EF 
Sbjct: 101 CFRIFDKNADGFIDIEELGEILRATG-----EHVTEEDIEDLMKDSDKNNDGRIDFDEFL 155

Query: 370 Q 370
           +
Sbjct: 156 K 156

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 162

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 35.7 bits (81), Expect = 0.004
 Identities = 15/86 (17%), Positives = 32/86 (37%), Gaps = 6/86 (6%)

Query: 314 KADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW 373
           + D DG           +    +     G ++EE  + +   D + +G +D +E  + + 
Sbjct: 64  EVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILR 123

Query: 374 KTTWSDQRNDLN------DEDEDGFV 393
            T       D+       D++ DG +
Sbjct: 124 ATGEHVTEEDIEDLMKDSDKNNDGRI 149

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (79), Expect = 0.003
 Identities = 11/58 (18%), Positives = 20/58 (34%), Gaps = 7/58 (12%)

Query: 311 AFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 368
            F        +++       L           L  +    +W  +DID +G++D  EF
Sbjct: 15  IFDSLSPVNGFLSGDKVKPVL-------LNSKLPVDILGRVWELSDIDHDGMLDRDEF 65

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 187

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.3 bits (83), Expect = 0.003
 Identities = 16/92 (17%), Positives = 33/92 (35%), Gaps = 8/92 (8%)

Query: 286 SWSEAVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQ-------LNLTG 338
            +SE +  +              AF     DNDG YIT +   + ++             
Sbjct: 78  EFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDG-YITRNEMLDIVDAIYQMVGNTVELP 136

Query: 339 HKHGLADEETKDLWVQADIDGNGVVDYKEFQQ 370
            +    ++    ++   D + +G +  +EFQ+
Sbjct: 137 EEENTPEKRVDRIFAMMDKNADGKLTLQEFQE 168

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} Length = 146

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

 Score = 35.6 bits (81), Expect = 0.004
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 6/58 (10%)

Query: 316 DNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI 372
           D DG+  I+ +     +  L        L D+E  ++  +ADIDG+G ++Y+EF + +
Sbjct: 92  DRDGNGLISAAELRHVMTNLG-----EKLTDDEVDEMIREADIDGDGHINYEEFVRMM 144

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} Length = 83

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.0 bits (77), Expect = 0.004
 Identities = 13/84 (15%), Positives = 24/84 (28%), Gaps = 6/84 (7%)

Query: 285 ASWSEAVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLA 344
           A+    +       +       T  F           I+   F     +         L 
Sbjct: 1   ATADRDILARLHKAVTSHYHAITQEFENFDTMKTN-TISREEFRAICNRRVQI-----LT 54

Query: 345 DEETKDLWVQADIDGNGVVDYKEF 368
           DE+   LW +  ++  G + Y +F
Sbjct: 55  DEQFDRLWNEMPVNAKGRLKYPDF 78

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	447
d1zwxa1	293	Sphingomyelin phosphodiesterase C {Listeria ivanov	99.89
d2ddra1	299	Sphingomyelin phosphodiesterase C {Bacillus cereus	99.85
d1vyba_	236	Endonuclease domain of LINE-1 reverse transcriptas	99.81
d2a40b1	260	Deoxyribonuclease I {Cow (Bos taurus) [TaxId: 9913	99.78
d1sr4b_	261	Cytolethal distending toxin subunit B {Haemophilus	99.72
d2f1na1	250	Cytolethal distending toxin subunit B {Escherichia	99.68
d1wdua_	228	Endonuclease domain of TRAS1 retrotransposon (ORF2	99.68
d1hd7a_	275	DNA repair endonuclease Hap1 {Human (Homo sapiens)	99.67
d1fw4a_	65	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	99.53
d1jc2a_	75	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.52
d1akoa_	268	DNA-repair enzyme exonuclease III {Escherichia col	99.5
d2fcea1	61	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	99.5
d1wrka1	82	Troponin C {Human (Homo sapiens), cardiac isoform	99.5
d1avsa_	81	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.5
d1oqpa_	77	Caltractin (centrin 2) {Green algae (Chlamydomonas	99.49
d1tiza_	67	Calmodulin-related protein T21P5.17 {Thale cress (	99.48
d1f54a_	77	Calmodulin {Baker's yeast (Saccharomyces cerevisia	99.48
d1c7va_	68	Calcium vector protein {Amphioxus (Branchiostoma l	99.47
d1fi5a_	81	Troponin C {Chicken (Gallus gallus), cardiac isofo	99.47
d2pq3a1	73	Calmodulin {Rattus norvegicus [TaxId: 10116]}	99.46
d2opoa1	81	Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta	99.43
d1wlza1	83	DJ-1-binding protein, DJBP {Human (Homo sapiens) [	99.41
d1s6ja_	87	Calcium-dependent protein kinase sk5 CLD {Soybean	99.39
d5pala_	109	Parvalbumin {Leopard shark (Triakis semifasciata)	99.37
d2imqx1	280	Salivary nitrophorin {Bedbug (Cimex lectularius) [	99.36
d1pvaa_	109	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	99.33
d1rwya_	109	Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}	99.29
d1qx2a_	76	Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}	99.29
d1rroa_	108	Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116	99.29
d2pvba_	107	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	99.27
d1zfsa1	93	Calcyclin (S100) {Rat (Rattus norvegicus), s100a1	99.25
d1wdcb_	142	Myosin Essential Chain {Bay scallop (Aequipecten i	99.18
d1cb1a_	78	Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}	99.18
d3c1va1	93	Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta	99.18
d1c07a_	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	99.16
d1lkja_	146	Calmodulin {Baker's yeast (Saccharomyces cerevisia	99.16
d1m45a_	146	Myosin Light Chain Mlc1p {Baker's yeast (Saccharom	99.16
d1wdcc_	152	Myosin Regulatory Chain {Bay scallop (Aequipecten	99.16
d2mysc_	145	Myosin Regulatory Chain {Chicken (Gallus gallus) [	99.14
d1ksoa_	93	Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta	99.14
d1fi6a_	92	Reps1 {Mouse (Mus musculus) [TaxId: 10090]}	99.14
d1a4pa_	92	Calcyclin (S100) {Human (Homo sapiens), P11 s100a1	99.13
d1exra_	146	Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI	99.12
d1ggwa_	140	Cdc4p {Fission yeast (Schizosaccharomyces pombe) [	99.12
d1k8ua_	89	Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta	99.11
d1exra_	146	Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI	99.11
d1yuta1	98	Calcyclin (S100) {Human (Homo sapiens), s100a13 [T	99.11
d1jfja_	134	EHCABP {Entamoeba (Entamoeba histolytica) [TaxId:	99.1
d2mysb_	145	Myosin Essential Chain {Chicken (Gallus gallus) [T	99.09
d2obha1	141	Calmodulin {Human (Homo sapiens) [TaxId: 9606]}	99.06
d2obha1	141	Calmodulin {Human (Homo sapiens) [TaxId: 9606]}	99.05
d1dtla_	156	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.05
d1y1xa_	182	Programmed cell death 6 protein-like protein {Leis	99.04
d1e8aa_	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	99.04
d1topa_	162	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.03
d1xk4a1	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	99.02
d1w7jb1	139	Myosin Essential Chain {Human (Homo sapiens) [TaxI	99.02
d1snla_	99	Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax	99.02
d1qv0a_	189	Calcium-regulated photoprotein {Hydrozoa (Obelia l	98.99
d2jxca1	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	98.98
d2mysc_	145	Myosin Regulatory Chain {Chicken (Gallus gallus) [	98.98
d1qjta_	99	Eps15 {Mouse (Mus musculus) [TaxId: 10090]}	98.98
d1uhka1	187	Calcium-regulated photoprotein {Jellyfish (Aequore	98.97
d1i9za_	345	Synaptojanin, IPP5C domain {Fission yeast (Schizos	98.96
d1topa_	162	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	98.94
d1s6ia_	182	Calcium-dependent protein kinase sk5 CLD {Soybean	98.91
d1juoa_	172	Sorcin {Human (Homo sapiens) [TaxId: 9606]}	98.9
d1nyaa_	176	Calerythrin {Saccharopolyspora erythraea [TaxId: 1	98.9
d1k94a_	165	Grancalcin {Human (Homo sapiens) [TaxId: 9606]}	98.9
d1k94a_	165	Grancalcin {Human (Homo sapiens) [TaxId: 9606]}	98.9
d1iq3a_	110	Pob1 {Human (Homo sapiens) [TaxId: 9606]}	98.89
d1psra_	100	Calcyclin (S100) {Human (Homo sapiens), psoriasin	98.89
d1m45a_	146	Myosin Light Chain Mlc1p {Baker's yeast (Saccharom	98.89
d1wdcb_	142	Myosin Essential Chain {Bay scallop (Aequipecten i	98.88
d1wdcc_	152	Myosin Regulatory Chain {Bay scallop (Aequipecten	98.82
d1ggwa_	140	Cdc4p {Fission yeast (Schizosaccharomyces pombe) [	98.81
d1y1xa_	182	Programmed cell death 6 protein-like protein {Leis	98.8
d2scpa_	174	Sarcoplasmic calcium-binding protein {Sandworm (Ne	98.8
d1df0a1	186	Calpain large subunit, C-terminal domain (domain I	98.78
d1hqva_	181	Apoptosis-linked protein alg-2 {Mouse (Mus musculu	98.76
d2sasa_	185	Sarcoplasmic calcium-binding protein {Amphioxus (B	98.76
d1qxpa2	188	Calpain large subunit, C-terminal domain (domain I	98.76
d1w7jb1	139	Myosin Essential Chain {Human (Homo sapiens) [TaxI	98.75
d1dtla_	156	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	98.73
d1df0a1	186	Calpain large subunit, C-terminal domain (domain I	98.73
d3cr5x1	90	Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId:	98.72
d1g8ia_	187	Frequenin (neuronal calcium sensor 1) {Human (Homo	98.71
d1jfja_	134	EHCABP {Entamoeba (Entamoeba histolytica) [TaxId:	98.71
d1xo5a_	180	Calcium- and integrin-binding protein, CIB {Human	98.7
d1bjfa_	181	Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}	98.7
d1hqva_	181	Apoptosis-linked protein alg-2 {Mouse (Mus musculu	98.7
d1s6ia_	182	Calcium-dependent protein kinase sk5 CLD {Soybean	98.69
d1lkja_	146	Calmodulin {Baker's yeast (Saccharomyces cerevisia	98.68
d2mysb_	145	Myosin Essential Chain {Chicken (Gallus gallus) [T	98.68
d1alva_	173	Calpain small (regulatory) subunit (domain VI) {Pi	98.67
d1alva_	173	Calpain small (regulatory) subunit (domain VI) {Pi	98.63
d2hf5a1	33	Troponin C {Human (Homo sapiens), cardiac isoform	98.62
d1qlsa_	95	Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1	98.61
d1qxpa2	188	Calpain large subunit, C-terminal domain (domain I	98.61
d1ij5a_	321	Cbp40 (plasmodial specific CaII-binding protein LA	98.57
d1j55a_	94	Calcyclin (S100) {Human (Homo sapiens), s100p [Tax	98.57
d1fpwa_	190	Frequenin (neuronal calcium sensor 1) {Baker's yea	98.57
d1omra_	201	Recoverin {Cow (Bos taurus) [TaxId: 9913]}	98.56
d1juoa_	172	Sorcin {Human (Homo sapiens) [TaxId: 9606]}	98.5
d1jbaa_	189	Guanylate cyclase activating protein 2, GCAP-2 {Co	98.48
d2zfda1	183	Calcineurin B-like protein 2 {Thale cress (Arabido	98.47
d1auib_	165	Calcineurin regulatory subunit (B-chain) {Human (H	98.45
d1jbaa_	189	Guanylate cyclase activating protein 2, GCAP-2 {Co	98.43
d1omra_	201	Recoverin {Cow (Bos taurus) [TaxId: 9913]}	98.37
d1ij5a_	321	Cbp40 (plasmodial specific CaII-binding protein LA	98.36
d1auib_	165	Calcineurin regulatory subunit (B-chain) {Human (H	98.35
d1s6ca_	178	Kchip1, Kv4 potassium channel-interacting protein	98.35
d1xk4c1	83	Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr	98.33
d1fpwa_	190	Frequenin (neuronal calcium sensor 1) {Baker's yea	98.29
d1ctda_	34	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	98.28
d1s6ca_	178	Kchip1, Kv4 potassium channel-interacting protein	98.15
d2zfda1	183	Calcineurin B-like protein 2 {Thale cress (Arabido	98.14
d2scpa_	174	Sarcoplasmic calcium-binding protein {Sandworm (Ne	98.13
d2sasa_	185	Sarcoplasmic calcium-binding protein {Amphioxus (B	98.01
d1nyaa_	176	Calerythrin {Saccharopolyspora erythraea [TaxId: 1	97.94
d1g8ia_	187	Frequenin (neuronal calcium sensor 1) {Human (Homo	97.89
d1qv0a_	189	Calcium-regulated photoprotein {Hydrozoa (Obelia l	97.88
d1uhka1	187	Calcium-regulated photoprotein {Jellyfish (Aequore	97.83
d2zkmx1	170	Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI	97.69
d1bjfa_	181	Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}	97.57
d1xo5a_	180	Calcium- and integrin-binding protein, CIB {Human	97.55
d5pala_	109	Parvalbumin {Leopard shark (Triakis semifasciata)	97.5
d1pvaa_	109	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	97.46
d2zkmx1	170	Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI	97.35
d1tuza_	118	Diacylglycerol kinase alpha, N-terminal domain {Hu	97.3
d1rwya_	109	Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}	97.29
d1ctda_	34	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	97.27
d2hf5a1	33	Troponin C {Human (Homo sapiens), cardiac isoform	97.23
d2pvba_	107	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	96.9
d1sraa_	151	C-terminal (EC) domain of BM-40/SPARC/osteonectin	96.8
d1rroa_	108	Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116	96.6
d1oqpa_	77	Caltractin (centrin 2) {Green algae (Chlamydomonas	96.25
d1fw4a_	65	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	96.02
d2fcea1	61	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	95.57
d1s6ja_	87	Calcium-dependent protein kinase sk5 CLD {Soybean	95.49
d1fi5a_	81	Troponin C {Chicken (Gallus gallus), cardiac isofo	95.49
d1jc2a_	75	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	95.25
d1j7qa_	86	Calcium vector protein {Amphioxus (Branchiostoma l	95.21
d1f54a_	77	Calmodulin {Baker's yeast (Saccharomyces cerevisia	95.1
d1tiza_	67	Calmodulin-related protein T21P5.17 {Thale cress (	95.07
d2pq3a1	73	Calmodulin {Rattus norvegicus [TaxId: 10116]}	95.05
d2opoa1	81	Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta	94.83
d1qasa1	94	Phosphoinositide-specific phospholipase C, isozyme	94.78
d1c07a_	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	94.7
d1snla_	99	Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax	94.66
d3c1va1	93	Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta	93.85
d1avsa_	81	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	93.84
d1qx2a_	76	Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}	93.7
d1h8ba_	73	alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]}	93.59
d1c7va_	68	Calcium vector protein {Amphioxus (Branchiostoma l	93.5
d1a4pa_	92	Calcyclin (S100) {Human (Homo sapiens), P11 s100a1	93.46
d1xk4a1	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	92.64
d1fi6a_	92	Reps1 {Mouse (Mus musculus) [TaxId: 10090]}	91.99
d1cb1a_	78	Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}	91.83
d1zfsa1	93	Calcyclin (S100) {Rat (Rattus norvegicus), s100a1	91.44
d1ksoa_	93	Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta	91.2
d1wlza1	83	DJ-1-binding protein, DJBP {Human (Homo sapiens) [	91.06
d1yuta1	98	Calcyclin (S100) {Human (Homo sapiens), s100a13 [T	90.73
d1qjta_	99	Eps15 {Mouse (Mus musculus) [TaxId: 10090]}	89.94
d1e8aa_	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	89.9
d1k8ua_	89	Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta	89.58
d1wrka1	82	Troponin C {Human (Homo sapiens), cardiac isoform	89.43
d1psra_	100	Calcyclin (S100) {Human (Homo sapiens), psoriasin	89.2
d2jxca1	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	87.41
d1tuza_	118	Diacylglycerol kinase alpha, N-terminal domain {Hu	87.27
d1iq3a_	110	Pob1 {Human (Homo sapiens) [TaxId: 9606]}	86.92
d1qlsa_	95	Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1	84.58
d2cclb1	59	Endo-1,4-beta-xylanase Y {Clostridium thermocellum	82.47
d1dava_	71	Cellulosome endoglucanase SS {Clostridium thermoce	82.18
d3cr5x1	90	Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId:	82.12
d1wlma1	138	Protein cgi-38 {Mouse (Mus musculus) [TaxId: 10090	82.08
d1j55a_	94	Calcyclin (S100) {Human (Homo sapiens), s100p [Tax	81.11

>d1zwxa1 d.151.1.3 (A:41-333) Sphingomyelin phosphodiesterase C {Listeria ivanovii [TaxId: 1638]}

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: Sphingomyelin phosphodiesterase-like
domain: Sphingomyelin phosphodiesterase C
species: Listeria ivanovii [TaxId: 1638]

Probab=99.89  E-value=9.4e-23  Score=190.82  Aligned_cols=226  Identities=14%  Similarity=0.084  Sum_probs=131.5

Q ss_pred             CCceeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhhhcCCc
Q 013259           27 QPCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYV  106 (447)
Q Consensus        27 ~~~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~  106 (447)
                      ++.||||||||+++...           ......+..|.+.|++.|...+|||||||||.  .....+.+...+.. .|.
T Consensus         2 ~~~lki~s~Nv~~~~~~-----------~~~~~~~~~r~~~i~~~i~~~~~DVi~LQEv~--~~~~~~~l~~~~~~-~~~   67 (293)
T d1zwxa1           2 PGNFKITSHNVYLFSRN-----------IYPNWGQMHRADLIAQADYMKNNDVVILNEAF--DTSASHRLLNNLRE-MYP   67 (293)
T ss_dssp             CCSCEEEEEEEEECCTT-----------TSTTSCHHHHHHHHHTSGGGSSCSEEEEEEEC--SHHHHHHHHHHTTT-TCC
T ss_pred             CCCCEEEEEecCcCccc-----------cCCCcCHHHHHHHHHHHHHhcCCCEEEEEccC--CcchHHHHHHHHhh-hcc
Confidence            46799999999864210           00112345788999999999999999999995  33344455555542 233


Q ss_pred             EEEecCC----------------CCCCceEEEEEecCCceEeeeEEEEecCCCCchhhhhhhcccccccccccCCCCCeE
Q 013259          107 NFKLART----------------NNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEI  170 (447)
Q Consensus       107 ~~~~~~~----------------~~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~l  170 (447)
                      +......                .....|++|+  |+ +|+.....+.+..........     ...+..+.....+..+
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~il--sr-~pi~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~  139 (293)
T d1zwxa1          68 HQTPVIGRSKHGWDKTEGNYSNFALEDGGVAVV--SQ-WPIVEKSQHIFQRGGGADRLS-----NKGFAYVKIMKNGKPY  139 (293)
T ss_dssp             EECCCTTSCSTTCSEEEC-----CCBCCCCEEE--ES-SCEEEEEEEECSCCCGGGGGB-----CCEEEEEEEEETTEEE
T ss_pred             ceehhcccccccccccccccccccccccceEEE--ec-cCcccceeeeeeccccccccc-----cceEEEEEEecCCceE
Confidence            2221110                1123489988  87 898887776555433211110     0111123334467899


Q ss_pred             EEEEecccCCCCCCC----chhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCCchhHhhhhC-CCcccccccc
Q 013259          171 LIVNTHLLFPHDSSL----SLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQ-GFVSSYDTAH  245 (447)
Q Consensus       171 ~v~n~HL~~~~~~~~----~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~-g~~d~~~~~~  245 (447)
                      .|+|+||.++.....    ...|..|+..+..++....   ...+.|+|||||||..+.+..++.+... ++.+......
T Consensus       140 ~v~~~Hl~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~---~~~~~~vil~GDfN~~~~~~~~~~~~~~~~~~~~~~~~~  216 (293)
T d1zwxa1         140 HIIGTHTQADDSLISKDTSRAIRAEQMQEIQTFIAKKN---IPKDEIIFIGGDLNVNYGTDEYHDMLKLLNVSSPANFNG  216 (293)
T ss_dssp             EEEEEECCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHT---CCTTSEEEEEEECCCCTTSHHHHHHHHHHTBCCCTTCCT
T ss_pred             EEEEeeeeccCCccchhHHHHHHHHHHHHhhhhhhhhc---cCCCCcEEEEeecCCCCCchHHHHHHhhccccchhhccc
Confidence            999999987543221    2346677777766665432   2356789999999999999888877654 3333222221


Q ss_pred             cCC--CCCCCceeecccCCCccccccceeccCcc
Q 013259          246 QYT--DADAHKWVSHRNHRGNICGVDFIWLLNPN  277 (447)
Q Consensus       246 ~~~--~~~~~tw~~~~~~~~~~~rIDyI~~~~~~  277 (447)
                      ...  +....++.......+...+|||||+++..
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~iD~I~~s~~~  250 (293)
T d1zwxa1         217 QMATWDPTTNSMLKESYPKAAPEYLDYIFVENGH  250 (293)
T ss_dssp             TSCSBCTTTCHHHHHHCTTSCCBCCEEEEEBTTS
T ss_pred             CCcccccccccccccccCCCCCceEEEEEEeccc
Confidence            111  11111121111122335689999998653

>d2ddra1 d.151.1.3 (A:7-305) Sphingomyelin phosphodiesterase C {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: Sphingomyelin phosphodiesterase-like
domain: Sphingomyelin phosphodiesterase C
species: Bacillus cereus [TaxId: 1396]

Probab=99.85  E-value=3e-21  Score=180.97  Aligned_cols=179  Identities=14%  Similarity=0.080  Sum_probs=105.2

Q ss_pred             CceeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhh-hcCCc
Q 013259           28 PCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLS-DAGYV  106 (447)
Q Consensus        28 ~~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~-~~gy~  106 (447)
                      .+||||||||+++..   +        ......+..|.+.|++.|...+|||||||||.  .....+.+...+. .++|.
T Consensus         2 ~tl~v~s~Nv~~~~~---~--------~~~~~~~~~r~~~i~~~i~~~~~DIi~LQEv~--~~~~~~~~~~~l~~~~~~~   68 (299)
T d2ddra1           2 DTLKVMTHNVYMLST---N--------LYPNWGQTERADLIGAADYIKNQDVVILNEVF--DNSASDRLLGNLKKEYPNQ   68 (299)
T ss_dssp             CEEEEEEEEEEECCT---T--------TCTTSCHHHHHHHHHHCSTTCSCSEEEEEEEC--CHHHHHHHHHHHTTTCCEE
T ss_pred             CceEEEEEECCcccc---c--------cCCCcCHHHHHHHHHHHHHhcCCCEEEEEccC--CcchHHHHHHHHHHhcCce
Confidence            589999999997410   0        11112356799999999999999999999994  3333444544443 33433


Q ss_pred             EEEecCC---------------CCCCceEEEEEecCCceEeeeEEEEecCCCCchhhhhhhcccccccccccCCCCCeEE
Q 013259          107 NFKLART---------------NNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEIL  171 (447)
Q Consensus       107 ~~~~~~~---------------~~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~  171 (447)
                      +......               .....|++++  ++ +|+.....+............     ...+........+..|.
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--s~-~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~  140 (299)
T d2ddra1          69 TAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIV--SK-WPIAEKIQYVFAKGCGPDNLS-----NKGFVYTKIKKNDRFVH  140 (299)
T ss_dssp             CCCTTSCCSTTSSEEEESCCTTCSSCCCCEEE--ES-SCEEEEEEEECSCCC----CC-----CCEEEEEEEEETTEEEE
T ss_pred             eeecccccccccceeeecccccccccceeEEE--EE-eecccceeeeeecccCccccc-----ceeEEEEEEecCCeEEE
Confidence            2221110               0123488888  77 677766666554332111100     00011122334678899


Q ss_pred             EEEecccCCCCC----CCchhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCCchhH
Q 013259          172 IVNTHLLFPHDS----SLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYK  230 (447)
Q Consensus       172 v~n~HL~~~~~~----~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~  230 (447)
                      |+|+||.+....    .....|..|+..+...+...   ....+.|+|||||||..|.+..+.
T Consensus       141 v~~~Hl~~~~~~~~~~~~~~~r~~q~~~~~~~~~~~---~~~~~~~vi~~GDfN~~~~~~~~~  200 (299)
T d2ddra1         141 VIGTHLQAEDSMCGKTSPASVRTNQLKEIQDFIKNK---NIPNNEYVLIGGDMNVNKINAENN  200 (299)
T ss_dssp             EEEEECCCC-------CHHHHHHHHHHHHHHHHHHH---TCCTTSCEEEEEECCCCCTTTSSC
T ss_pred             EEEccccCCCCccchhhhHHHHHHHHHHHhhhhhhh---cccccceEEEEecCCCCccchhhh
Confidence            999999875321    12234677777776655443   223567999999999988765543

>d1vyba_ d.151.1.1 (A:) Endonuclease domain of LINE-1 reverse transcriptase homolog {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: DNase I-like
domain: Endonuclease domain of LINE-1 reverse transcriptase homolog
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1e-19  Score=165.03  Aligned_cols=195  Identities=16%  Similarity=0.184  Sum_probs=111.5

Q ss_pred             CCceeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhhhcCCc
Q 013259           27 QPCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYV  106 (447)
Q Consensus        27 ~~~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~  106 (447)
                      ..+|||+||||.+.            +       ...|...|.++|.+.+||||||||+........     .+...++.
T Consensus         3 ~~~~kv~s~Nv~g~------------~-------~~~~~~~i~~~i~~~~~DIi~LQE~~~~~~~~~-----~~~~~~~~   58 (236)
T d1vyba_           3 NSHITILTLNINGL------------N-------SAIKRHRLASWIKSQDPSVCCIQETHLTCRDTH-----RLKIKGWR   58 (236)
T ss_dssp             CCCEEEEEEECSCC------------C-------SHHHHHHHHHHHHHHCCSEEEEECCCCCTTSGG-----GCCCTTCC
T ss_pred             CCCeEEEEEEcCCc------------c-------chhhHHHHHHHHHHCCCeEEEEEcccCccccch-----hhhhcccc
Confidence            35799999999742            0       113678899999999999999999853332211     11223444


Q ss_pred             EEEecCCCCCCceEEEEEecCCceEeeeEEEEecCCCCchhhhhhhcccccccccccCCCCCeEEEEEecccCCCCCCCc
Q 013259          107 NFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLS  186 (447)
Q Consensus       107 ~~~~~~~~~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~v~n~HL~~~~~~~~~  186 (447)
                      +++.........|+||+++.. ....... +.... .....            .+.....+..++++|+|+....     
T Consensus        59 ~~~~~~~~~~~~g~~i~~k~~-~~~~~~~-~~~~~-~~~~~------------~~~~~~~~~~~~~~~~y~~~~~-----  118 (236)
T d1vyba_          59 KIYQANGKQKKAGVAILVSDK-TDFKPTK-IKRDK-EGHYI------------MVKGSIQQEELTILNIYAPNTG-----  118 (236)
T ss_dssp             EEEEECCSSSSCCEEEEECTT-CCCEEEE-EEECT-TSSEE------------EEEEEETTEEEEEEEEECCSSS-----
T ss_pred             eEEEeeccccccceeeEeecc-ccccccc-ccccc-cccce------------eeeeeeccCcceeEEecccccc-----
Confidence            444444445567999996554 2222111 11111 11110            0122335678999999984321     


Q ss_pred             hhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCC--------------chhHhhhhCCCcccccccccCCCCCC
Q 013259          187 LVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRG--------------HVYKFLRSQGFVSSYDTAHQYTDADA  252 (447)
Q Consensus       187 ~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s--------------~~~~~l~~~g~~d~~~~~~~~~~~~~  252 (447)
                        ......   +.+..+..   ..+.|+|||||||.....              .....+...|+.|+|+..+..  +..
T Consensus       119 --~~~~~~---~~~~~~~~---~~~~~~Il~GDfN~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~r~~~~~--~~~  188 (236)
T d1vyba_         119 --APRFIK---QVLSDLQR---DLDSHTLIMGDFNTPLSTLDRSTRQKVNKDTQELNSALHQADLIDIYRTLHPK--STE  188 (236)
T ss_dssp             --HHHHHH---HHHHHTTT---TCCTTEEEEEECSSCSSGGGBTTCCCCCHHHHHHHHHHHHTTEEEHHHHHCTT--CCC
T ss_pred             --cHHHHH---hhhhhhcc---cccceeEEeeccccccchhhhcccccchhhHHHHHHHHHhhhcccccceeccC--Ccc
Confidence              111122   22222221   256799999999975331              234556677899988776533  223


Q ss_pred             CceeecccCCCccccccceeccCcc
Q 013259          253 HKWVSHRNHRGNICGVDFIWLLNPN  277 (447)
Q Consensus       253 ~tw~~~~~~~~~~~rIDyI~~~~~~  277 (447)
                      .+|....  .+...||||||+++..
T Consensus       189 ~~~~~~~--~~~~~RiD~il~s~~~  211 (236)
T d1vyba_         189 YTFFSAP--HHTYSKIDHIVGSKAL  211 (236)
T ss_dssp             CSEEETT--TTEEECCEEEEEEGGG
T ss_pred             ccccCCC--CCCCceeEEEEEChHH
Confidence            4454433  2345689999997654

>d2a40b1 d.151.1.1 (B:1-260) Deoxyribonuclease I {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: DNase I-like
domain: Deoxyribonuclease I
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.78  E-value=1e-18  Score=157.53  Aligned_cols=214  Identities=14%  Similarity=0.042  Sum_probs=115.1

Q ss_pred             eeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhhh-cCCcEE
Q 013259           30 ITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSD-AGYVNF  108 (447)
Q Consensus        30 lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~-~gy~~~  108 (447)
                      |||+||||+++...         ..     ....+.+.|++.|  .+|||||||||+.........+...+.. .++.+.
T Consensus         1 lrI~s~Ni~~~~~~---------~~-----~~~~~~~~l~~~i--~~~DIi~LQEv~~~~~~~~~~l~~~~~~~~~~~~~   64 (260)
T d2a40b1           1 LKIAAFNIRTFGET---------KM-----SNATLASYIVRIV--RRYDIVLIQEVRDSHLVAVGKLLDYLNQDDPNTYH   64 (260)
T ss_dssp             CEEEEEEEEEESHH---------HH-----HSHHHHHHHHHHH--TTCSEEEEEEECCTTSHHHHHHHHHHTSSSTTSCE
T ss_pred             CEEEEEeCCccCCC---------cc-----ccHHHHHHHHHHc--CCCCEEEEEeeecCCchhHHHHHHhhhhcccCcce
Confidence            79999999864100         00     0112344555544  4899999999975543433333333322 222222


Q ss_pred             Eec--C--CCCCCceEEEEEecCCceEeeeEEEEecCCCCchhhhhhhccccccc-ccccCCCCCeEEEEEecccCCCCC
Q 013259          109 KLA--R--TNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFS-QCRNGDLRQEILIVNTHLLFPHDS  183 (447)
Q Consensus       109 ~~~--~--~~~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~g~~l~v~n~HL~~~~~~  183 (447)
                      +..  .  ......+.+++++.....+.................   ........ ..........+.+++.|+.+.   
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  138 (260)
T d2a40b1          65 YVVSEPLGRNSYKERYLFLFRPNKVSVLDTYQYDDGCESCGNDS---FSREPAVVKFSSHSTKVKEFAIVALHSAPS---  138 (260)
T ss_dssp             EEECCCBCSSSCCBEEEEEECTTTCEEEEEEECCTTSTTTHHHH---CSSCCEEEEEECTTSSSSEEEEEECCCCGG---
T ss_pred             eEecccCCCCccccceeeeecccccceeccceeccccccCcccc---ccccceeeeeecccccceEEEEEeeccccc---
Confidence            221  1  122345788888777656654433322111111000   00000000 112223456799999998553   


Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCCchhHhhhhCCCcccccccccCCCCCCCceeecccCCC
Q 013259          184 SLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRNHRG  263 (447)
Q Consensus       184 ~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~g~~d~~~~~~~~~~~~~~tw~~~~~~~~  263 (447)
                       ....|..|...+.+.+....     .+.|+|+|||||..+.+..++.+...++...+......  ....+|....    
T Consensus       139 -~~~~~~~~~~~~~~~~~~~~-----~~~~~iv~GDfN~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~----  206 (260)
T d2a40b1         139 -DAVAEINSLYDVYLDVQQKW-----HLNDVMLMGDFNADCSYVTSSQWSSIRLRTSSTFQWLI--PDSADTTATS----  206 (260)
T ss_dssp             -GHHHHHHHHHHHHHHHHHHH-----CCCCEEEEEECCCSTTTSCGGGGGGCHHHHSTTEEESS--CTTCCCBSSS----
T ss_pred             -hhhHHHHHHHHHHHHHHhhc-----cCCCEEEcccccCCccchhhhhhhhhcccccccccccC--CCCCccccCC----
Confidence             23456677777776665432     57799999999999999888877665544333222211  1122332222    


Q ss_pred             ccccccceeccCcc
Q 013259          264 NICGVDFIWLLNPN  277 (447)
Q Consensus       264 ~~~rIDyI~~~~~~  277 (447)
                      ..++|||||+++..
T Consensus       207 ~~~~iD~i~~s~~~  220 (260)
T d2a40b1         207 TNCAYDRIVVAGSL  220 (260)
T ss_dssp             CCCCCEEEEEESHH
T ss_pred             CCCceeEEEeCchh
Confidence            24689999997654

>d1sr4b_ d.151.1.1 (B:) Cytolethal distending toxin subunit B {Haemophilus ducreyi [TaxId: 730]}

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: DNase I-like
domain: Cytolethal distending toxin subunit B
species: Haemophilus ducreyi [TaxId: 730]

Probab=99.72  E-value=2.4e-19  Score=164.18  Aligned_cols=94  Identities=12%  Similarity=0.100  Sum_probs=56.3

Q ss_pred             eEEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCCchhHhhhhCCCcccccccccCC
Q 013259          169 EILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYT  248 (447)
Q Consensus       169 ~l~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~g~~d~~~~~~~~~  248 (447)
                      ...++++|+......    .+..+..................+.|+|+|||||..|.+..++.+...++.+++...+.  
T Consensus       131 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~GDfN~~~~~~~~~~~~~~~~~~~~~~~~~--  204 (261)
T d1sr4b_         131 TDVFFTVHALATGGS----DAVSLIRNIFTTFNSSSSPPERRVYSWMVVGDFNRAPANLEVALRQEPAVSENTIIIAP--  204 (261)
T ss_dssp             TEEEEEEECCTTTTT----THHHHHHHHHHHHHC---CGGGGGCEEEEEEECSSCHHHHHHHHTTSHHHHHTCEEECC--
T ss_pred             cccceEEEEeecCCc----ccHHHHHHHHHHHHHHHHHhhccCCCEEEeeecCcCcccHHHHHhhhhccccceeccCC--
Confidence            356778888654321    23333333222222111111125678999999999999999999987788877766542  


Q ss_pred             CCCCCceeecccCCCccccccceeccCcc
Q 013259          249 DADAHKWVSHRNHRGNICGVDFIWLLNPN  277 (447)
Q Consensus       249 ~~~~~tw~~~~~~~~~~~rIDyI~~~~~~  277 (447)
                        ..++|   .+    ..+|||||+++..
T Consensus       205 --~~~t~---~~----~~~iD~i~~~~~~  224 (261)
T d1sr4b_         205 --TEPTH---RS----GNILDYAILHDAH  224 (261)
T ss_dssp             --SSCSB---TT----SCCCEEEEEECTT
T ss_pred             --CCCcC---CC----CCeeceEEecCcc
Confidence              12222   21    3479999997653

>d2f1na1 d.151.1.1 (A:1-250) Cytolethal distending toxin subunit B {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: DNase I-like
domain: Cytolethal distending toxin subunit B
species: Escherichia coli [TaxId: 562]

Probab=99.68  E-value=1.3e-18  Score=159.02  Aligned_cols=94  Identities=10%  Similarity=0.024  Sum_probs=50.5

Q ss_pred             CCeEEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCCchhHhhhhCCCccccccccc
Q 013259          167 RQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQ  246 (447)
Q Consensus       167 g~~l~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~~~~~l~~~g~~d~~~~~~~  246 (447)
                      .+.+.|+|+||.+...    ..|..+++.+....+..... .....|+|+|||||..|.+.....+.  ++.+.+...+ 
T Consensus       127 ~~~~~v~n~Hl~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~iv~GDfN~~p~~~~~~~~~--~~~~~~~~~~-  198 (250)
T d2f1na1         127 IGNDAFFTAHAIAMRN----NDAPALVEEVYNFFRDSRDP-VHQALNWMILGDFNREPADLEMNLTV--PVRRASEIIS-  198 (250)
T ss_dssp             ETTEEEEEEECCSSSS----CSHHHHHHHHHHHHHTCSSH-HHHTCEEEEEEECSSCHHHHHTTSCH--HHHHTEEEEC-
T ss_pred             eceEEEEEEEcCCCCc----hhHHHHHHHHHHHHHHHHhh-hccCCceEEecccCcCCchhhhhhhc--cccceeeecC-
Confidence            3579999999966432    22444444333322221100 11467999999999988664333321  2233333332 


Q ss_pred             CCCCCCCceeecccCCCccccccceeccCcch
Q 013259          247 YTDADAHKWVSHRNHRGNICGVDFIWLLNPNK  278 (447)
Q Consensus       247 ~~~~~~~tw~~~~~~~~~~~rIDyI~~~~~~~  278 (447)
                         +..+||++       ..+|||||+++...
T Consensus       199 ---~~~~t~~~-------~~riD~i~~s~~~~  220 (250)
T d2f1na1         199 ---PAAATQTS-------QRTLDYAVAGNSVA  220 (250)
T ss_dssp             ---CSSCSBTT-------SCCCEEEEEEESSC
T ss_pred             ---CCCCccCC-------CCcEEEEEEechHh
Confidence               22233322       24699999976543

>d1wdua_ d.151.1.1 (A:) Endonuclease domain of TRAS1 retrotransposon (ORF2) {Silkworm (Bombyx mori) [TaxId: 7091]}

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: DNase I-like
domain: Endonuclease domain of TRAS1 retrotransposon (ORF2)
species: Silkworm (Bombyx mori) [TaxId: 7091]

Probab=99.68  E-value=1.2e-16  Score=143.38  Aligned_cols=142  Identities=14%  Similarity=0.089  Sum_probs=80.4

Q ss_pred             CceeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhhhcCCcE
Q 013259           28 PCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVN  107 (447)
Q Consensus        28 ~~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~  107 (447)
                      ++||||||||....                     .+...++..|.+.+||||||||++....      .......+|.+
T Consensus         1 ~p~rV~~~Nv~~~~---------------------~~~~~l~~~i~~~~~DIi~lQE~~~~~~------~~~~~~~~~~~   53 (228)
T d1wdua_           1 PPYRVLQANLQRKK---------------------LATAELAIEAATRKAAIALIQEPYVGGA------KSMKGFRGVRV   53 (228)
T ss_dssp             CCEEEEEEECTTCH---------------------HHHHHHHHHHHHHTCSEEEEESCCC------------CCCSSCEE
T ss_pred             CCEEEEeeccCCCh---------------------HHHHHHHHHHHhcCCCEEEEECCCcCCC------CccccccceEE
Confidence            36999999999520                     2568899999999999999999864321      11122235555


Q ss_pred             EEecCCCCCCceEEEEEecCCceEeeeEEEEecCCCCchhhhhhhcccccccccccCCCCCeEEEEEecccCCCCCCCch
Q 013259          108 FKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSL  187 (447)
Q Consensus       108 ~~~~~~~~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~v~n~HL~~~~~~~~~~  187 (447)
                      ++.........|++++++++.+.+..   .  .........           .+.+...+..++++|+|+..+..   ..
T Consensus        54 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~-----------~~~i~~~~~~i~v~~~y~~~~~~---~~  114 (228)
T d1wdua_          54 FQSTAQGDGTVKAAIAVFDHDLDVIQ---Y--PQLTTNNIV-----------VVGIRTRAWEITLVSYYFEPDKP---IE  114 (228)
T ss_dssp             EECCCCTTCCCCEEEEECCSSCEEEE---C--TTTCCSSEE-----------EEEEECSSCEEEEEEEECCTTSC---SH
T ss_pred             EeccCCCCCCcceEEEEEccccceec---c--cCCCCCCEE-----------EEEEEcCCccEEEEEEEeCCccc---ch
Confidence            55444445556777776666433321   1  111111000           12233457889999999743221   11


Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCcc
Q 013259          188 VRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSK  224 (447)
Q Consensus       188 ~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p  224 (447)
                         .....    +..+...  ....|+|||||||...
T Consensus       115 ---~~~~~----l~~~~~~--~~~~~vIi~GDfN~~~  142 (228)
T d1wdua_         115 ---SYLEQ----IKRVERK--MGPKRLIFGGDANAKS  142 (228)
T ss_dssp             ---HHHHH----HHHHHHT--TCSSSEEEEEECCCCC
T ss_pred             ---HHHHH----HHHHHHh--cCCceEEEecccccCc
Confidence               11222    2222222  1466899999999854

>d1hd7a_ d.151.1.1 (A:) DNA repair endonuclease Hap1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: DNase I-like
domain: DNA repair endonuclease Hap1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=1.1e-16  Score=147.78  Aligned_cols=204  Identities=16%  Similarity=0.151  Sum_probs=97.0

Q ss_pred             CCceeEEecccccccccCCCCCCCCCCCCCccCChhhH-HHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhhhcCC
Q 013259           27 QPCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGR-NQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGY  105 (447)
Q Consensus        27 ~~~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R-~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy  105 (447)
                      +.+|||+||||.+.            +         .| .+.++++|++.+|||||||||......+...+..   ..+|
T Consensus        16 ~~~mki~S~NvnGl------------r---------~~~~~~~~~~i~~~~pDIi~LQE~k~~~~~~~~~~~~---~~~~   71 (275)
T d1hd7a_          16 PATLKICSWNVDGL------------R---------AWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQE---LPGL   71 (275)
T ss_dssp             BCCEEEEEEECSSH------------H---------HHHHTTHHHHHHHHCCSEEEEECCCCCC--------------CC
T ss_pred             CCcEEEEEEEeccH------------H---------hhhhccHHHHHHhCCCCEEEEEccccChhhCCHHHHh---ccCc
Confidence            36799999999631            0         11 2457789999999999999996544444433333   3455


Q ss_pred             cEEEecCCC--CCCceEEEEEecCCceEeeeEEEEecCCCCchhhhhhhcccccccccccCCCCCeEEEEEecccCCCCC
Q 013259          106 VNFKLARTN--NRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDS  183 (447)
Q Consensus       106 ~~~~~~~~~--~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~v~n~HL~~~~~~  183 (447)
                      .+.......  ....|++++++.....+.  ..............            .........+....+|.....  
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~--  135 (275)
T d1hd7a_          72 SHQYWSAPSDKEGYSGVGLLSRQCPLKVS--YGIGDEEHDQEGRV------------IVAEFDSFVLVTAYVPNAGRG--  135 (275)
T ss_dssp             CEEEEECC-----CCCEEEEESSCCSEEE--ESCSCGGGSSSSCE------------EEEECSSCEEEEEECCCCCGG--
T ss_pred             ceeeeeeecccccccccceecccCceeee--eccccccchhhhhe------------eeeeecceeeeeeeeeecccc--
Confidence            554333222  234567777554432222  11111111100000            001112233455555442211  


Q ss_pred             CCchhhHHHHH---HHHHHHHHHHHHcCCCCCcEEEeecCCCccCCc---------------------hhHhhhhCCCcc
Q 013259          184 SLSLVRLHQVY---KILQHVESYQKEHNLKPIPIILCGDWNGSKRGH---------------------VYKFLRSQGFVS  239 (447)
Q Consensus       184 ~~~~~R~~q~~---~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s~---------------------~~~~l~~~g~~d  239 (447)
                         ..+.....   ...........    .+.+++++||||..+...                     ..+.+...|+.|
T Consensus       136 ---~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~gd~n~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~l~~~~~~D  208 (275)
T d1hd7a_         136 ---LVRLEYRQRWDEAFRKFLKGLA----SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLAD  208 (275)
T ss_dssp             ---GTTHHHHHHHHHHHHHHHHHHH----HHSCEEEEEECSCCCSGGGBSCHHHHTTSTTSCHHHHHHHHHHHHHTTCEE
T ss_pred             ---ccchhhhhhhcccccccccccc----cCCceEeecccccCcchhhhccchhhhcccccccccchhhhhhhcccCccc
Confidence               11222221   11111111111    356899999999865321                     123455568999


Q ss_pred             cccccccCCCCCCCceeeccc--CCCccccccceeccCcc
Q 013259          240 SYDTAHQYTDADAHKWVSHRN--HRGNICGVDFIWLLNPN  277 (447)
Q Consensus       240 ~~~~~~~~~~~~~~tw~~~~~--~~~~~~rIDyI~~~~~~  277 (447)
                      +|+..++........|+....  ..+...||||||+++..
T Consensus       209 ~~r~~~p~~~~~~t~~~~~~~~~~~~~g~RIDyi~vs~~l  248 (275)
T d1hd7a_         209 SFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSL  248 (275)
T ss_dssp             HHHHHCTTCTTCCSBCCSGGGHHHHTCCBCCEEEEECGGG
T ss_pred             ceeeecCCcCCceeeccccCCcccCCCCeEeEEEEeChHH
Confidence            998877654333333332221  11223589999997664

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.53  E-value=8.2e-15  Score=104.24  Aligned_cols=63  Identities=33%  Similarity=0.590  Sum_probs=60.1

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ++|+++|+.||+|++ |+|+.+||+.+++.+|     .++++++++.+++.+|.|+||.|+|+||++.|
T Consensus         3 eel~~aF~~fD~d~~-G~I~~~el~~~l~~lg-----~~~~~~e~~~l~~~~D~d~~g~I~~~eF~~~m   65 (65)
T d1fw4a_           3 EEIREAFRVFDKDGN-GYISAAELRHVMTNLG-----EKLTDEEVDEMIREADIDGDGQVNYEEFVQMM   65 (65)
T ss_dssp             HHHHHHHHHHCTTCS-SEECHHHHHHHHHHTT-----CCCCHHHHHHHHHTTCTTCSSSEEHHHHHHHC
T ss_pred             HHHHHHHHHHcCCCC-CcCCHHHHHHHHHHhC-----CCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHC
Confidence            578999999999999 9999999999999999     89999999999999999999999999999653

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.52  E-value=1.2e-14  Score=106.34  Aligned_cols=65  Identities=20%  Similarity=0.428  Sum_probs=61.5

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ..++++++|+.||+|++ |+|+..||+.+|+.+|     ..+++++++.+|+.+|.|++|+|+|+||+++|
T Consensus         7 ~eeel~~~F~~fD~~~~-G~I~~~el~~~l~~lg-----~~~~~~e~~~~~~~~D~d~dg~I~~~EF~~~m   71 (75)
T d1jc2a_           7 SEEELANCFRIFDKNAD-GFIDIEELGEILRATG-----EHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMM   71 (75)
T ss_dssp             CHHHHHHHHHHHCCSTT-SSEEHHHHHHHHHHSS-----SCCCHHHHHHHHHHHCSSSCSEECHHHHHHHH
T ss_pred             cHHHHHHHHHHHcCCCc-CeEcHHHHHHHHHhcC-----CCccHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence            34689999999999999 9999999999999999     89999999999999999999999999999765

>d1akoa_ d.151.1.1 (A:) DNA-repair enzyme exonuclease III {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: DNase I-like
domain: DNA-repair enzyme exonuclease III
species: Escherichia coli [TaxId: 562]

Probab=99.50  E-value=2.4e-14  Score=129.58  Aligned_cols=207  Identities=17%  Similarity=0.208  Sum_probs=103.3

Q ss_pred             eeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcEEEEcccccChhhHHHHHHHHhhhcCCcEEE
Q 013259           30 ITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFK  109 (447)
Q Consensus        30 lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DII~LQEv~~~~~~~~~~l~~~l~~~gy~~~~  109 (447)
                      |||+||||++.                     ..|.+.|+++|++.+|||||||||+...+.+..   ..+...||.+..
T Consensus         1 Mki~S~NvnG~---------------------r~r~~~i~~~i~~~~~DIi~LQEv~~~~~~~~~---~~~~~~~~~~~~   56 (268)
T d1akoa_           1 MKFVSFNINGL---------------------RARPHQLEAIVEKHQPDVIGLQETKVHDDMFPL---EEVAKLGYNVFY   56 (268)
T ss_dssp             CEEEEEECSCG---------------------GGCHHHHHHHHHHHCCSEEEEECCCCCGGGCCH---HHHHHTTCEEEE
T ss_pred             CEEEEEEeCCH---------------------HHhHHHHHHHHHHCCCCEEEEEeeecChhhCCH---HHHhhcCceeee
Confidence            79999999741                     136789999999999999999999765544432   233446777665


Q ss_pred             ecCCCCCCceEEEEEecCCceEeeeEEEEecCCCCchhhhhhhcccccccccccCCCCCeEEEEEecccCCCCCCCchhh
Q 013259          110 LARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDLRQEILIVNTHLLFPHDSSLSLVR  189 (447)
Q Consensus       110 ~~~~~~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~v~n~HL~~~~~~~~~~~R  189 (447)
                      .....  ..+..... .. .+....  .  ..............      ..........+.++..+...+.. .....+
T Consensus        57 ~~~~~--~~~~~~~~-~~-~~~~~~--~--~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  121 (268)
T d1akoa_          57 HGQKG--HYGVALLT-KE-TPIAVR--R--GFPGDDEEAQRRII------MAEIPSLLGNVTVINGYFPQGES-RDHPIK  121 (268)
T ss_dssp             EEETT--EEEEEEEE-SS-CCSEEE--E--SSTTCCHHHHTTEE------EEEEEETTEEEEEEEEECCCCCB-TTCTTH
T ss_pred             ccccc--cccccccc-cc-cchhcc--c--Cccccccccccccc------eeecccccCCeEEEEeeeccCCc-ccchhh
Confidence            42221  12222221 22 111111  1  00000000000000      00111123445555554433322 112223


Q ss_pred             HHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCC--------------------------chhHhhhhCCCcccccc
Q 013259          190 LHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRG--------------------------HVYKFLRSQGFVSSYDT  243 (447)
Q Consensus       190 ~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s--------------------------~~~~~l~~~g~~d~~~~  243 (447)
                      .......................+.+++|++|..+..                          ..+..+...|+.|+|..
T Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~  201 (268)
T d1akoa_         122 FPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWGLVDTFRH  201 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCTTSCEEEEEECCCCCSGGGBCSCHHHHHHHHHHTBTTSCHHHHHHHHHHHHTTEEEHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHhhcCCcEEEEeecccCcchhhhhhhhhcccccccccccCCCHHHHHHHHHHHcCCCcceeee
Confidence            3333333332222222223367789999999975432                          13445567788898888


Q ss_pred             cccCCCCCCCceeecccC---CCccccccceeccCc
Q 013259          244 AHQYTDADAHKWVSHRNH---RGNICGVDFIWLLNP  276 (447)
Q Consensus       244 ~~~~~~~~~~tw~~~~~~---~~~~~rIDyI~~~~~  276 (447)
                      .++.... ..+|......   .....||||||+++.
T Consensus       202 ~~~~~~~-~~~~~~~~~~~~~~~~g~RIDyI~~s~~  236 (268)
T d1akoa_         202 ANPQTAD-RFSWFDYRSKGFDDNRGLRIDLLLASQP  236 (268)
T ss_dssp             HSTTCCS-CCSBCCTTTTHHHHTCCBCCEEEEEEHH
T ss_pred             cCCCccc-cccccCCccccccCCCccEEEEEEeChH
Confidence            7654322 2333332211   111358999999654

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.50  E-value=1.9e-14  Score=100.82  Aligned_cols=61  Identities=25%  Similarity=0.421  Sum_probs=58.4

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHH
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQ  370 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~  370 (447)
                      ++++++|+.||++++ |+|+.+||+.+|+.+|     .++++++++.|++.+|.|++|+|+|+||++
T Consensus         1 Eel~~aF~~fD~~~~-G~I~~~el~~~l~~~g-----~~~~~~ei~~l~~~~D~d~dg~I~~~eFl~   61 (61)
T d2fcea1           1 EDFVKAFQVFDKEST-GKVSVGDLRYMLTGLG-----EKLTDAEVDELLKGVEVDSNGEIDYKKFIE   61 (61)
T ss_dssp             HHHHHHHHHHCTTCC-SCEEHHHHHHHHHHTT-----CCCCHHHHHHHHTTCCCCTTSEECHHHHHH
T ss_pred             ChHHHHHHHHCCCCC-CeEeHHHHHHHHHHcC-----CCCCHHHHHHHHHHcCCCCCCcEeHHHhcC
Confidence            368899999999999 9999999999999999     899999999999999999999999999984

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=99.50  E-value=2.4e-14  Score=106.54  Aligned_cols=69  Identities=22%  Similarity=0.331  Sum_probs=63.7

Q ss_pred             HhhhhhHHHHhhhhcCCC-CCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          300 RRASLTETDAFAFLKADN-DGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~-~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ..+..+++++|..||+|+ + |+|+..||+.+|+.+|     ..+++++++++++++|.|+||.|+|+||+..|.+
T Consensus        11 ~eq~~~~~~~F~~fD~d~~~-G~I~~~el~~~l~~lg-----~~~t~~el~~~i~~~D~d~~G~I~f~eFl~im~~   80 (82)
T d1wrka1          11 EEQKNEFKAAFDIFVLGAED-GSISTKELGKVMRMLG-----QNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR   80 (82)
T ss_dssp             HHHHHHHHHHHHHHTTTCTT-SSBCHHHHHHHHHHTT-----CCCCHHHHHHHHHTTCTTCCSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCcCCC-CeEeHHHHHHHHHHcC-----CCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence            566789999999999995 8 9999999999999999     8899999999999999999999999999976643

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.50  E-value=2.6e-14  Score=106.35  Aligned_cols=68  Identities=22%  Similarity=0.337  Sum_probs=63.5

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      .....+++++|..||+|++ |+|+..||+.+|+.+|     .++++.+++++|..+|.|+||.|+|+||+.+|.
T Consensus        10 ~~~i~el~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~s~~e~~~~~~~~D~d~~g~I~~~eF~~~m~   77 (81)
T d1avsa_          10 EEMIAEFKAAFDMFDADGG-GDISTKELGTVMRMLG-----QNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMV   77 (81)
T ss_dssp             HHHHHHHHHHHHHHCTTCS-SEECHHHHHHHHHHTT-----CCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCC-CeEchhHHHHHHHHcC-----CCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence            4556789999999999999 9999999999999999     899999999999999999999999999997664

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

Probab=99.49  E-value=3e-14  Score=105.02  Aligned_cols=68  Identities=25%  Similarity=0.364  Sum_probs=63.1

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhcc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT  375 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~  375 (447)
                      ..++++++|+.||+|++ |+|+.+||+.+|+.+|     .+++.++++.+++.+|.|++|.|+|+||+++|...
T Consensus         7 ~~e~l~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~e~~~~~~~~D~d~~G~I~~~EF~~~m~k~   74 (77)
T d1oqpa_           7 SREEILKAFRLFDDDNS-GTITIKDLRRVAKELG-----ENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKT   74 (77)
T ss_dssp             HHHHHHHHHHHHCTTCS-SSEEHHHHHHHHHHHT-----CCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHcCCCC-CEechHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHcc
Confidence            44678999999999999 9999999999999999     88999999999999999999999999999777543

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.48  E-value=3.7e-14  Score=101.47  Aligned_cols=63  Identities=21%  Similarity=0.371  Sum_probs=59.6

Q ss_pred             hHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          305 TETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       305 ~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      .++++|+.+|+|++ |+|+..||+.+|+.+|     ..+++++++.+|+.+|.|+||.|+|+||+..|.
T Consensus         2 ~~r~~F~~~D~d~~-G~I~~~El~~~l~~lg-----~~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m~   64 (67)
T d1tiza_           2 SAKRVFEKFDKNKD-GKLSLDEFREVALAFS-----PYFTQEDIVKFFEEIDVDGNGELNADEFTSCIE   64 (67)
T ss_dssp             THHHHHHHHCTTSS-SCEEHHHHHHHHHHTC-----TTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHH
T ss_pred             hHHHHHHHHCCCCc-CcCcHHHHHHHHHHhc-----cccchHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence            46899999999999 9999999999999999     889999999999999999999999999997663

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.48  E-value=4.6e-14  Score=104.03  Aligned_cols=67  Identities=25%  Similarity=0.418  Sum_probs=62.2

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ....+++++|+.||.|++ |+|+..||+.+|+.+|     ..+++++++.++..+|.+++|.|+|+||+.+|.
T Consensus         7 eqi~el~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~t~~e~~~~~~~~D~~~~g~I~~~eF~~~m~   73 (77)
T d1f54a_           7 EQIAEFKEAFALFDKDNN-GSISSSELATVMRSLG-----LSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMS   73 (77)
T ss_dssp             HHHHHHHHHHHHTCTTCS-SEEEHHHHHHHHHHHT-----CCCCHHHHHHHHHTTCCSSCCEEEHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHcCCCC-CeEChHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence            345678999999999999 9999999999999999     899999999999999999999999999996553

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=99.47  E-value=1.3e-14  Score=104.05  Aligned_cols=64  Identities=31%  Similarity=0.458  Sum_probs=59.5

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCC-CCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKH-GLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~-~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ++++++|+.||+|++ |+|+.+||+.+|+.+|     . ++++++++.||+.+|.|+||.|+|+||+.+|.
T Consensus         2 eel~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~s~~e~~~~~~~~D~d~dG~i~~~EF~~~m~   66 (68)
T d1c7va_           2 EEILRAFKVFDANGD-GVIDFDEFKFIMQKVG-----EEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIK   66 (68)
T ss_dssp             HHHHHHHHHHSCSGG-GEECHHHHHHHSSTTT-----TCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCc-CeEcHHHHHHHHHHhC-----CCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence            468999999999999 9999999999999998     5 47999999999999999999999999997653

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

Probab=99.47  E-value=4.2e-14  Score=105.19  Aligned_cols=64  Identities=20%  Similarity=0.432  Sum_probs=60.7

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ...|+++|+.||+|++ |+|+..||+.+|+.+|     .++++++++.+|..+|.|+||+|+|+||+++|
T Consensus        14 ee~l~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~ev~~~~~~~D~d~dg~I~~~EF~~~m   77 (81)
T d1fi5a_          14 EEELSDLFRMFDKNAD-GYIDLEELKIMLQATG-----ETITEDDIEELMKDGDKNNDGRIDYDEFLEFM   77 (81)
T ss_dssp             HHHHHHHHHHHCSSCS-SEECHHHHHHHHHTSS-----SCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCC-CcccHHHHHHHHHhcC-----CCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHH
Confidence            3578999999999999 9999999999999999     88999999999999999999999999999765

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

Probab=99.46  E-value=3.8e-14  Score=103.26  Aligned_cols=67  Identities=25%  Similarity=0.429  Sum_probs=62.4

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ....+++++|+.||.|++ |+|+..||+.+|+.+|     ..+++++++.+++.+|.|++|.|+|+||+.+|-
T Consensus         5 eei~el~~~F~~~D~d~~-G~I~~~el~~~l~~~g-----~~~s~~~~~~~~~~~D~d~~g~I~f~eF~~~m~   71 (73)
T d2pq3a1           5 EQIAEFKEAFSLFDKDGD-GTITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPEFLTMMA   71 (73)
T ss_dssp             HHHHHHHHHHHHTCTTSS-SEEEGGGHHHHHHHTT-----CCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCC-ceEeHHHHHHHHHHhC-----CCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence            355689999999999999 9999999999999999     889999999999999999999999999997653

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

Probab=99.43  E-value=1.3e-13  Score=102.50  Aligned_cols=65  Identities=22%  Similarity=0.410  Sum_probs=59.9

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ...+++++|+.||+|++ |+|+..||+.+|+.+|     . +++++++.+|..+|.|+||.|+|+||+.+|.
T Consensus         4 e~~e~~~~F~~~D~d~~-G~I~~~El~~~l~~lg-----~-~~~~ei~~~~~~~D~d~~G~I~~~EF~~~~~   68 (81)
T d2opoa1           4 DIADRERIFKRFDTNGD-GKISSSELGDALKTLG-----S-VTPDEVRRMMAEIDTDGDGFISFDEFTDFAR   68 (81)
T ss_dssp             HHHHHHHHHHHHCTTCS-SEEEHHHHHHHHHTTT-----T-CCHHHHHHHHHHHCTTCSSEECHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCC-CCCcHHHHHHHHHHhh-----c-CCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence            45788999999999999 9999999999999988     4 6899999999999999999999999997653

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=3.2e-13  Score=100.96  Aligned_cols=77  Identities=17%  Similarity=0.299  Sum_probs=70.5

Q ss_pred             HHHHhHHHHHHHhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHH
Q 013259          289 EAVFGMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF  368 (447)
Q Consensus       289 ~~v~~~~~~~~~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF  368 (447)
                      +.++..+...+......+.++|+.+|.+++ |+|+.+||+.+|..+|     .++++++++.++..+|.|++|.|+|.||
T Consensus         5 ~ei~~~l~~~i~~~~~~l~~~F~~~D~~~~-G~i~~~ef~~~l~~~~-----~~l~~~e~~~l~~~~d~~~~g~I~y~eF   78 (83)
T d1wlza1           5 RDILARLHKAVTSHYHAITQEFENFDTMKT-NTISREEFRAICNRRV-----QILTDEQFDRLWNEMPVNAKGRLKYPDF   78 (83)
T ss_dssp             HHHHHHHHHHHHHTHHHHHHHHHHHCTTCS-SCBCHHHHHHHHHHHT-----CCCCHHHHHHHHTTSCBCTTSCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-ceEChhHHHHHHHHhC-----CCCChhHHHHHhhccccCCCCcEeHHHH
Confidence            456666777777778899999999999999 9999999999999999     8899999999999999999999999999


Q ss_pred             HHH
Q 013259          369 QQR  371 (447)
Q Consensus       369 ~~~  371 (447)
                      +..
T Consensus        79 l~~   81 (83)
T d1wlza1          79 LSR   81 (83)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            964

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=99.39  E-value=5.9e-14  Score=105.78  Aligned_cols=67  Identities=30%  Similarity=0.470  Sum_probs=61.9

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ......++++|..||+|++ |+|+..||+.+|+.+|     ..+++++++++++.+|.|++|.|+|+||+.+|
T Consensus        19 ~~~i~~l~~~F~~~D~d~~-G~I~~~el~~~l~~lg-----~~~s~~e~~~l~~~~D~d~~g~I~~~EFl~am   85 (87)
T d1s6ja_          19 EEEIGGLKELFKMIDTDNS-GTITFDELKDGLKRVG-----SELMESEIKDLMDAADIDKSGTIDYGEFIAAT   85 (87)
T ss_dssp             SSSTTTTTTHHHHHCTTCS-SCEEHHHHHHHHHTTT-----SSCCHHHHHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHcCCCC-CcCcHHHHHHHHHHcC-----CCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHH
Confidence            3455678999999999999 9999999999999999     88999999999999999999999999998654

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

Probab=99.37  E-value=5.9e-13  Score=104.58  Aligned_cols=69  Identities=25%  Similarity=0.397  Sum_probs=60.8

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ....++++|+.||+|++ |+|+.+||+.+|+.++  ..+..+++++++.+|+.+|.|+||+|+|+||+++|.
T Consensus        39 ~~~~l~~~F~~~D~d~~-G~I~~~El~~~l~~l~--~~g~~~~~~e~~~~~~~~D~d~dG~I~~~EF~~~m~  107 (109)
T d5pala_          39 TDAQVKEVFEILDKDQS-GFIEEEELKGVLKGFS--AHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVA  107 (109)
T ss_dssp             CHHHHHHHHHHHCTTCS-SEECHHHHHTHHHHHC--TTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred             CHHHHHHHHhhhcCCCC-CeEcHHHHHHHHHHhh--hccCcCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHH
Confidence            44689999999999999 9999999999998873  112779999999999999999999999999997663

>d2imqx1 d.151.1.2 (X:3-282) Salivary nitrophorin {Bedbug (Cimex lectularius) [TaxId: 79782]}

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: Inositol polyphosphate 5-phosphatase (IPP5)
domain: Salivary nitrophorin
species: Bedbug (Cimex lectularius) [TaxId: 79782]

Probab=99.36  E-value=6.4e-14  Score=129.62  Aligned_cols=160  Identities=13%  Similarity=0.047  Sum_probs=83.9

Q ss_pred             CCceeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHhhCCCcE--EEEcccccChh------hHHHHHHH
Q 013259           27 QPCITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLLYERSSI--ICLQEFWVGNE------ELVDMYEK   98 (447)
Q Consensus        27 ~~~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~~~~~DI--I~LQEv~~~~~------~~~~~l~~   98 (447)
                      +-+++|+||||.+.            +..       .....++..|.+.+|||  |||||+.....      .+...+..
T Consensus         4 ~~~v~I~TwNv~~~------------~~~-------~~~~~~l~~i~~~~pDI~vI~lQE~~~~~~~~~~~~~~~~~~~~   64 (280)
T d2imqx1           4 QLSVHTVSWNSGHE------------RAP-------TNLEELLGLNSGETPDVIAVAVQGFGFQTDKPQQGPACVKNFQS   64 (280)
T ss_dssp             EEEEEEEEEEEETC------------CCC-------SCCHHHHTCTTSCCCSEEEEEEEESCTTTCTTCCHHHHHHHHHH
T ss_pred             ceEEEEEEECCCCC------------cCC-------cCHHHHhcccccCCCCEEEEEeEecCccccccchhHHHHHHHHH
Confidence            34699999999642            000       02467888888999997  99999953322      13344445


Q ss_pred             HhhhcCCcEEEecCCCCCCceEEEEEecCCceEee----eEEEEecCC-CCchhhhhhhcccccccccccCCCCCeEEEE
Q 013259           99 RLSDAGYVNFKLARTNNRGDGLLTAVHKDYFRVVN----YRDLLFNDF-GDRVAQLLHVELIDPFSQCRNGDLRQEILIV  173 (447)
Q Consensus        99 ~l~~~gy~~~~~~~~~~~~~G~ai~~rs~~~~i~~----~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~g~~l~v~  173 (447)
                      .+...+|.....  ....+.|++++.+.. .....    .....+... ....+.           ..+....+..+.++
T Consensus        65 ~~~~~~y~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v-----------~~~~~i~~~~~~~i  130 (280)
T d2imqx1          65 LLTSKGYTKLKN--TITETMGLTVYCLEK-HLDQNTLKNETIIVTVDDQKKSGGI-----------VTSFTIYNKRFSFT  130 (280)
T ss_dssp             HHHHTTEEEEEE--EECSSEEEEEEEEGG-GCCTTTCCCEEEEEECSTTSCSEEE-----------EEEEEETTEEEEEE
T ss_pred             HhccCCeeEEEe--eeeeceEEEEEEccc-ccccceecceeEeccCCcccCCcEE-----------EEEEEECCEEEEee
Confidence            555567766543  223456888886654 11110    011111110 111111           12223357889999


Q ss_pred             EecccCCCCCCCchhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCccCC
Q 013259          174 NTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSKRG  226 (447)
Q Consensus       174 n~HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p~s  226 (447)
                      |+|+.........  |..+.. .....    ........++|++||||..+..
T Consensus       131 n~hl~~~~~~~~~--~~~~~~-~~~~~----~~~~~~~~~vi~~GD~N~~~~~  176 (280)
T d2imqx1         131 TSRMSDEDVTSTN--TKYAYD-TRLDY----SKKDDPSDFLFWIGDLNVRVET  176 (280)
T ss_dssp             EEECCTTCCCTTS--SSSSCC-GGGCT----TSSSSCCSEEEEEEECSCCBCS
T ss_pred             cccCCccchhHHH--HHHHHH-Hhhhh----hhhccCCCeeEEeccccccccc
Confidence            9999764422111  111110 00000    1112245679999999987654

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=99.33  E-value=8.2e-13  Score=103.75  Aligned_cols=69  Identities=25%  Similarity=0.379  Sum_probs=60.6

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ....++++|+.||+|++ |+|+.+||+.+|+.++  ..+..+++++++.||+.+|.|+||+|+|+||+++|.
T Consensus        39 ~~~~~~~~F~~~D~d~~-G~I~~~El~~~l~~l~--~~g~~ls~~ev~~~~~~~D~d~dG~I~~~EF~~~m~  107 (109)
T d1pvaa_          39 SANDVKKVFKAIDADAS-GFIEEEELKFVLKSFA--ADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVH  107 (109)
T ss_dssp             CHHHHHHHHHHHCTTCS-SSBCHHHHHTGGGGTC--TTCCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             CHHHHHHHhhCccCCCc-CeEcHHHHHHHHHHhh--hcCCCCCHHHHHHHHHHHCCCCcCcEeHHHHHHHHH
Confidence            45678999999999999 9999999999998873  111679999999999999999999999999997663

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=99.29  E-value=4.1e-12  Score=99.88  Aligned_cols=70  Identities=23%  Similarity=0.391  Sum_probs=61.6

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      .....++.+|+.||+|++ |+|+.+||+.+|+.++  .....+++++++.+|+.+|.|+||+|+|+||+++|.
T Consensus        38 ~~~~~~~~~F~~~D~d~~-G~I~~~El~~~l~~l~--~~~~~~~~~e~~~~~~~~D~d~dG~i~~~EF~~~m~  107 (109)
T d1rwya_          38 KSADDVKKVFHILDKDKS-GFIEEDELGSILKGFS--SDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVA  107 (109)
T ss_dssp             SCHHHHHHHHHHHSTTCS-SEECHHHHHTHHHHHC--TTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred             CCHHHHHHHhhcccCCCC-CcCcHHHHHHHHHHhc--cccccCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence            455688899999999999 9999999999999885  122568999999999999999999999999997663

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.29  E-value=1e-12  Score=96.33  Aligned_cols=65  Identities=18%  Similarity=0.305  Sum_probs=56.2

Q ss_pred             hhhhHHHHhhhhcCC--CCCCcccHHHHHHHHHHhccCCCCCCCC--HHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          302 ASLTETDAFAFLKAD--NDGDYITYSGFCEALEQLNLTGHKHGLA--DEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~--~~~G~i~~~el~~~l~~~g~~~~~~~~~--~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ..++++++|+.||.+  ++ |+|+.+||+.+|+.+|     .+++  +.+++++|+.+|.|+||.|+|+||+.+|
T Consensus         3 s~eel~~~F~~fd~~~~~~-G~I~~~El~~~l~~lg-----~~~~~~~~ei~~~~~~~D~d~dG~I~f~EF~~~m   71 (76)
T d1qx2a_           3 SPEEIKGAFEVFAAKEGDP-NQISKEELKLVMQTLG-----PSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMM   71 (76)
T ss_dssp             CHHHHHHHHHHHHTSSSCT-TSEEHHHHHHHHHHHG-----GGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHH
T ss_pred             CHHHHHHHHHHHcccCCCC-CEECHHHHHHHHHHhC-----CcCCCCHHHHHHHHHHhhcCCCCcCcHHHHHHHH
Confidence            356799999999764  57 9999999999999998     5554  4579999999999999999999999765

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.29  E-value=1.2e-12  Score=102.62  Aligned_cols=70  Identities=27%  Similarity=0.432  Sum_probs=61.6

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      .....++++|+.||+|++ |+|+.+||+.+|+.++  .....+++++++.+|+.+|.|+||+|+|+||+.+|.
T Consensus        38 ~~~~~l~~~F~~~D~d~~-G~I~~~El~~~l~~l~--~~~~~l~~~~~~~~~~~~D~d~dG~I~~~EF~~~m~  107 (108)
T d1rroa_          38 MSASQVKDIFRFIDNDQS-GYLDGDELKYFLQKFQ--SDARELTESETKSLMDAADNDGDGKIGADEFQEMVH  107 (108)
T ss_dssp             SCHHHHHHHHHHHCTTCS-SEECTHHHHTGGGGTC--TTSCCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred             CCHHHHHHHHhhhcCCCC-CeEcHHHHHHHHHHHH--hccCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHc
Confidence            345678999999999999 9999999999999875  122668999999999999999999999999997663

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=99.27  E-value=3.5e-12  Score=99.75  Aligned_cols=70  Identities=24%  Similarity=0.374  Sum_probs=61.8

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ....+++++|+.||+|++ |+|+..||+.+|+.++  .....+++++++.+|+.+|.|+||+|+|+||+.+|.
T Consensus        37 ~~~~~l~~~F~~~D~d~~-G~I~~~el~~~l~~l~--~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~m~  106 (107)
T d2pvba_          37 KSLDDVKKAFYVIDQDKS-GFIEEDELKLFLQNFS--PSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK  106 (107)
T ss_dssp             SCHHHHHHHHHHHCTTCS-SSBCHHHHHTGGGGTC--TTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             CCHHHHHHHHHhhccCCC-CcCcHHHHHHHHHHhh--cccccCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence            445679999999999999 9999999999999985  123579999999999999999999999999997663

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

Probab=99.25  E-value=9.5e-12  Score=94.69  Aligned_cols=73  Identities=16%  Similarity=0.169  Sum_probs=60.7

Q ss_pred             HhhhhhHHHHhhhh-cCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          300 RRASLTETDAFAFL-KADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       300 ~~~~~~l~~~F~~~-D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ......|.++|+.+ |+||+.|+|+.+||+++|+.++......+.++++++++|+.+|.|+||.|+|+||+.+|
T Consensus         5 E~~i~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~Idf~EF~~lm   78 (93)
T d1zfsa1           5 ETAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLV   78 (93)
T ss_dssp             HHHHHHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTTTCCSEECSHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHH
Confidence            34567889999988 88863399999999999998763222356789999999999999999999999999766

>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=99.18  E-value=1.7e-11  Score=101.33  Aligned_cols=76  Identities=20%  Similarity=0.343  Sum_probs=64.8

Q ss_pred             HHhHHHHHH--HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHH
Q 013259          291 VFGMFKCLL--RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF  368 (447)
Q Consensus       291 v~~~~~~~~--~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF  368 (447)
                      ++..+...+  ......++++|+.||+|++ |+|+.+||+.+|..+|     .++++++++.+|+.+|.| +|+|+|+||
T Consensus        61 F~~~~~~~~~~~~~~~~l~~aF~~~D~d~~-G~I~~~el~~~l~~~g-----~~lt~~e~~~l~~~~d~~-~G~I~y~eF  133 (142)
T d1wdcb_          61 FLSIFSDKLSGTDSEETIRNAFAMFDEQET-KKLNIEYIKDLLENMG-----DNFNKDEMRMTFKEAPVE-GGKFDYVKF  133 (142)
T ss_dssp             HHHHHHHHTCSCCCHHHHHHHHHTTCTTCC-SCEEHHHHHHHHHHSS-----SCCCHHHHHHHHHHCCEE-TTEECHHHH
T ss_pred             ccccccccccccchhhhHHHhhhhhcccCC-CcccHHHHHHHHHHcc-----ccCCHHHHHHHHHHhCCC-CCEEcHHHH
Confidence            334444344  3345789999999999999 9999999999999999     889999999999999998 699999999


Q ss_pred             HHHHh
Q 013259          369 QQRIW  373 (447)
Q Consensus       369 ~~~~~  373 (447)
                      +++|.
T Consensus       134 ~~~l~  138 (142)
T d1wdcb_         134 TAMIK  138 (142)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            97663

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.18  E-value=4.4e-12  Score=93.10  Aligned_cols=67  Identities=16%  Similarity=0.230  Sum_probs=56.0

Q ss_pred             hhhhHHHHhhhhcC--CCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          302 ASLTETDAFAFLKA--DNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       302 ~~~~l~~~F~~~D~--~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ...+|+.+|+.||.  ++. |+|+.+||+.+|+.+..   ....+++++++||..+|.|+||.|+|+||+.+|
T Consensus         5 ~~~~l~~~F~~y~~~d~~~-g~is~~Elk~ll~~~~~---~~~~~~~~v~~~~~~~D~d~dG~Idf~EF~~l~   73 (78)
T d1cb1a_           5 SPAELKSIFEKYAAKEGDP-NQLSKEELKQLIQAEFP---SLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLV   73 (78)
T ss_dssp             CHHHHHHHHHHHHTTSSST-TEECHHHHHHHHHHHCS---SCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHH
T ss_pred             hHHHHHHHHHHHccCCCCC-CEECHHHHHHHHHHHcC---CCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHH
Confidence            45689999999975  346 89999999999998730   044567789999999999999999999999665

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

Probab=99.18  E-value=3.1e-11  Score=91.46  Aligned_cols=72  Identities=15%  Similarity=0.096  Sum_probs=57.3

Q ss_pred             hhhhhHHHHhhhh-cCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          301 RASLTETDAFAFL-KADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       301 ~~~~~l~~~F~~~-D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .....+.++|+.| |.|+++|+|+.+||+++|+...........+++++++||+.+|.|+||.|+|+||+.+|
T Consensus         6 ~~i~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~DG~I~F~EF~~lm   78 (93)
T d3c1va1           6 KALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFL   78 (93)
T ss_dssp             HHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTCSSSEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHHcCCCCCCCCHHHHHHHH
Confidence            3456888999998 66776357999999999987320000156899999999999999999999999999665

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=1.8e-11  Score=93.55  Aligned_cols=63  Identities=14%  Similarity=0.221  Sum_probs=58.3

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ....++++|+.+|+|++ |+|+.+|++.+|...|       ++.+++++++..+|.|+||.|+|+||+.+|
T Consensus         8 e~~~~~~~F~~~D~d~~-G~is~~e~~~~l~~~~-------l~~~~l~~i~~~~D~d~dG~l~~~EF~~am   70 (95)
T d1c07a_           8 EKAKYDEIFLKTDKDMD-GFVSGLEVREIFLKTG-------LPSTLLAHIWSLCDTKDCGKLSKDQFALAF   70 (95)
T ss_dssp             HHHHHHHHHHHHCTTCS-SEECHHHHHHHHHTTT-------CCHHHHHHHHHHHCTTCSSSEETTTHHHHH
T ss_pred             HHHHHHHHHHHHCCCCC-CCCcHHHHHHHHHhcC-------CCHHHHHHHHHHhCCCCCCeEcHHHHHHHH
Confidence            44567889999999999 9999999999999888       889999999999999999999999999666

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.16  E-value=3.3e-11  Score=99.96  Aligned_cols=64  Identities=20%  Similarity=0.413  Sum_probs=60.1

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ....++.+|+.+|+|++ |+|+.+||+.+|..+|     ..+++++++.+++.+| |+||+|+|+||+++|
T Consensus        81 ~~~~~~~aF~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~~~~~~~~~~d-d~dG~I~~~eF~~~m  144 (146)
T d1lkja_          81 SEQELLEAFKVFDKNGD-GLISAAELKHVLTSIG-----EKLTDAEVDDMLREVS-DGSGEINIQQFAALL  144 (146)
T ss_dssp             HHHHHHHHHHHHCSSSS-CEEEHHHHHHHHHHHT-----CSCCHHHHHHHHHHHC-CSSSEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHcC-----CcccHHHHHHHHHhcc-CCCCeEeHHHHHHHh
Confidence            34678999999999999 9999999999999999     8999999999999999 999999999999665

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Light Chain Mlc1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.16  E-value=2.6e-11  Score=100.64  Aligned_cols=67  Identities=22%  Similarity=0.413  Sum_probs=62.7

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ..+.+..+|+.+|.+++ |+|+.+||+.+|..+|     .++++++++.+|..+|.|+||.|+|+||++.|++
T Consensus        79 ~~~~l~~~F~~~D~~~~-G~I~~~el~~~l~~~g-----~~l~~~ei~~l~~~~D~d~dG~I~y~eF~~~i~~  145 (146)
T d1m45a_          79 KTEDFVKAFQVFDKEST-GKVSVGDLRYMLTGLG-----EKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVLR  145 (146)
T ss_dssp             CTHHHHHHHHTTCSSSS-SEEEHHHHHHHHHHST-----TCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHC
T ss_pred             hHHHHHHHHHhhccccc-cccchhhhhhhhcccC-----CcchHHHHHHHHHHhCCCCCCcEEHHHHHHHHHc
Confidence            44579999999999999 9999999999999999     8899999999999999999999999999987764

>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=99.16  E-value=4.1e-11  Score=100.16  Aligned_cols=70  Identities=19%  Similarity=0.360  Sum_probs=62.5

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCC--CCceeehHHHHHHHhccC
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADID--GNGVVDYKEFQQRIWKTT  376 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~--~~g~i~~~EF~~~~~~~~  376 (447)
                      .....+.++|+.||.+++ |+|+.+||+.+|..+|     .++++++++.+++.+|.+  ++|+|+|+||++.|+..+
T Consensus        79 ~~~~~l~~aF~~~D~~~~-G~I~~~el~~~l~~~g-----~~ls~~e~~~l~~~~d~~~d~~G~I~y~eF~~~~~~~p  150 (152)
T d1wdcc_          79 GTFADYMEAFKTFDREGQ-GFISGAELRHVLTALG-----ERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAGP  150 (152)
T ss_dssp             CCHHHHHHHHHTTCSSSS-SEEEHHHHHHHHHHSS-----SCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHHCS
T ss_pred             hHHHhhhhhhhccccccC-ccchHHHHHHHHHHcC-----CCCCHHHHHHHHHHhccCCCCCCEEEHHHHHHHHhcCC
Confidence            344679999999999999 9999999999999999     889999999999999865  568999999999887643

>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.14  E-value=4e-11  Score=99.34  Aligned_cols=67  Identities=16%  Similarity=0.317  Sum_probs=61.0

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      .....++++|+.+|+|++ |+|+.+||+.+|..+|     .++++++++.+++. |.|+||+|+|+||++.|+.
T Consensus        78 ~~~~~l~~aF~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~e~~~l~~~-~~d~dG~I~y~eF~~~ll~  144 (145)
T d2mysc_          78 GTFEDFVEGLRVFDKEGN-GTVMGAELRHVLATLG-----EKMTEEEVEELMKG-QEDSNGCINYEAFVKHIMS  144 (145)
T ss_pred             chHHHHHHHHHHhhcCCC-CEEcHHHHHHHHHHhC-----CCCCHHHHHHHHhh-cCCCCCeEEHHHHHHHHhc
Confidence            455678999999999999 9999999999999999     88999999999975 8899999999999987753

>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a3 [TaxId: 9606]

Probab=99.14  E-value=4.7e-11  Score=90.21  Aligned_cols=71  Identities=14%  Similarity=0.117  Sum_probs=58.3

Q ss_pred             hhhhhHHHHhhhh-cCCCCCC-cccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          301 RASLTETDAFAFL-KADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       301 ~~~~~l~~~F~~~-D~~~~~G-~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .....+..+|+.+ |+||+ | +|+.+||+++|+...-.......++++++++|+.+|.|+||.|+|+||+.+|
T Consensus         6 ~~i~~i~~vF~kya~~dGd-~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n~Dg~IdF~EF~~l~   78 (93)
T d1ksoa_           6 QAVAAIVCTFQEYAGRCGD-KYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSL   78 (93)
T ss_dssp             HHHHHHHHHHHHHHTSSSC-TTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHTTTCEECHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCcCCC-CCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHH
Confidence            4456788899887 99999 8 5999999999988641111245688999999999999999999999999665

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Reps1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.14  E-value=5.4e-11  Score=90.23  Aligned_cols=63  Identities=21%  Similarity=0.312  Sum_probs=58.3

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ....++++|+.+|+|++ |+|+.+|++.+|.+.|       ++.+++.++++.+|.|+||.|+|+||+.+|
T Consensus         7 e~~~y~~~F~~~D~d~~-G~i~~~e~~~~l~~~~-------l~~~~l~~i~~~~D~d~dG~l~~~EF~~a~   69 (92)
T d1fi6a_           7 QRQYYVNQFKTIQPDLN-GFIPGSAAKEFFTKSK-------LPILELSHIWELSDFDKDGALTLDEFCAAF   69 (92)
T ss_dssp             HHHHHHHHHTTTCCSTT-CEEEHHHHHHHHHHHS-------SCHHHHHHHHHHHCTTCSSEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCcc-cchhHHHHHHHHHHcc-------CCHHHHHHHHHHhCCCCCCeecHHHHHHHH
Confidence            44578899999999999 9999999999999988       889999999999999999999999998555

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]

Probab=99.13  E-value=1.8e-11  Score=92.58  Aligned_cols=71  Identities=17%  Similarity=0.095  Sum_probs=57.3

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      .....+..+|+.+|.| + |+||.+||+.+|....-.......+++.++.+|+.+|.|+||+|+|+||+.+|.
T Consensus         6 ~~ie~l~~~F~~yd~d-d-G~is~~El~~~l~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~   76 (92)
T d1a4pa_           6 HAMETMMFTFHKFAGD-K-GYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIA   76 (92)
T ss_dssp             HHHHHHHHHHHHHHGG-G-CSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCC-C-CEEcHHHHHHHHHHhccccccccCCHHHHHHHHHHHhCCCCCCCcHHHHHHHHH
Confidence            4567899999999977 8 999999999999873200000445778899999999999999999999997663

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

Probab=99.12  E-value=1e-10  Score=96.87  Aligned_cols=66  Identities=26%  Similarity=0.500  Sum_probs=62.3

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ....++.+|+.+|.|++ |+|+.+||+.++..+|     ..+++++++.+++.+|.|+||+|+|+||++.|+
T Consensus        80 ~~~~~~~~F~~~D~d~~-G~i~~~e~~~~l~~~~-----~~~~~~~~~~i~~~~D~d~dG~i~~~eF~~~l~  145 (146)
T d1exra_          80 SEEELIEAFKVFDRDGN-GLISAAELRHVMTNLG-----EKLTDDEVDEMIREADIDGDGHINYEEFVRMMV  145 (146)
T ss_dssp             HHHHHHHHHHHHSTTCS-SCBCHHHHHHHHHHTT-----CCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred             hHHHHHHHHHHhCCCCC-CcCCHHHHHHHHHHHh-----hcCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhc
Confidence            45688999999999999 9999999999999999     889999999999999999999999999998775

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Cdc4p
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.12  E-value=3e-11  Score=99.50  Aligned_cols=65  Identities=23%  Similarity=0.368  Sum_probs=60.7

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ...++++|+.+|+|++ |+|+.+||+.+|..+|     .++++++++.+++.+|.+ ||.|+|+||++.|+.
T Consensus        75 ~~~l~~aF~~~D~d~~-G~I~~~el~~~l~~~g-----~~lt~~e~~~l~~~~d~~-dG~I~y~eF~~~m~s  139 (140)
T d1ggwa_          75 PEEFVKGFQVFDKDAT-GMIGVGELRYVLTSLG-----EKLSNEEMDELLKGVPVK-DGMVNYHDFVQMILA  139 (140)
T ss_dssp             HHHHHHHHHTTCSSCS-SCCCHHHHHHHHHHHH-----SCSCHHHHHHHHHHTTCS-SCCSTTTHHHHHHHC
T ss_pred             HHHHHHHHHHHhccCC-CcchHHHHHHHHHHcC-----CCCCHHHHHHHHHhhCCC-CCEEeHHHHHHHHhc
Confidence            4568999999999999 9999999999999999     889999999999999998 999999999987754

>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a6 [TaxId: 9606]

Probab=99.11  E-value=3.8e-11  Score=89.97  Aligned_cols=66  Identities=17%  Similarity=0.226  Sum_probs=57.9

Q ss_pred             hhhhhHHHHhhhh-cCCCCCC-cccHHHHHHHHHH---hccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          301 RASLTETDAFAFL-KADNDGD-YITYSGFCEALEQ---LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       301 ~~~~~l~~~F~~~-D~~~~~G-~i~~~el~~~l~~---~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .....+..+|+.+ |+||+ | .|+..||+++++.   .|     ...++++++++|+++|.|+||+|+|+||+.+|
T Consensus         6 ~ai~~ii~vF~kya~~dg~-~~~ls~~Elk~Ll~~e~~~~-----~~~~~~~~~~~~~~lD~d~Dg~IdF~EF~~l~   76 (89)
T d1k8ua_           6 QAIGLLVAIFHKYSGREGD-KHTLSKKELKELIQKELTIG-----SKLQDAEIARLMEDLDRNKDQEVNFQEYVTFL   76 (89)
T ss_dssp             HHHHHHHHHHHHHHTSSSC-TTEEEHHHHHHHHHHHSCCG-----GGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcccCCC-CCeecHHHHHHHHHHHHHhh-----ccCCHHHHHHHHHHhcCCCCCCCcHHHHHHHH
Confidence            4566788899888 99999 7 6999999999987   45     56788999999999999999999999999666

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

Probab=99.11  E-value=1e-11  Score=103.04  Aligned_cols=119  Identities=17%  Similarity=0.239  Sum_probs=97.4

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc-------
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK-------  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~-------  374 (447)
                      +..+++++|..+|+|++ |+|+.+||+.++..+|     ..+++..++.++..+|.+++|.|+|+||+..+..       
T Consensus         7 e~~~l~~~F~~~D~~~~-G~Is~~e~~~~l~~~~-----~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~   80 (146)
T d1exra_           7 QIAEFKEAFALFDKDGD-GTITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDS   80 (146)
T ss_dssp             HHHHHHHHHHHHCTTCS-SEECHHHHHHHHHHHT-----CCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCC-CeECHHHHHHHHHhcC-----CCCCHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHhhccCh
Confidence            45679999999999999 9999999999999999     8899999999999999999999999999976622       


Q ss_pred             ----cCcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          375 ----TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       375 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                          ..++...|.+..|.+...|........|..+++..     +..  +...+|.+.+|.|+
T Consensus        81 ~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~-----~~~--i~~~~D~d~dG~i~  136 (146)
T d1exra_          81 EEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDE-----VDE--MIREADIDGDGHIN  136 (146)
T ss_dssp             HHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHH-----HHH--HHHHHCSSSSSSBC
T ss_pred             HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhcCCHHH-----HHH--HHHHhCCCCCCeEe
Confidence                23445667788888888887766667776555443     233  66678889999886

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a13 [TaxId: 9606]

Probab=99.11  E-value=5e-11  Score=91.27  Aligned_cols=69  Identities=13%  Similarity=0.141  Sum_probs=56.2

Q ss_pred             hhhhhHHHHhhhh-cCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          301 RASLTETDAFAFL-KADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       301 ~~~~~l~~~F~~~-D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .....+..+|+.| |.||+.|+||..||+.+|+..+-   ....++++++++|+.+|.|+||.|+|+||+.+|
T Consensus        11 ~~i~~l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~---~~~~~~~~v~~l~~~~D~d~DG~IdF~EF~~l~   80 (98)
T d1yuta1          11 ESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLP---HLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLI   80 (98)
T ss_dssp             HHHHHHHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCT---TTTCCSSCHHHHHHHHCTTCCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcccCCCCCEEcHHHHHHHHHHhcc---ccCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHH
Confidence            3456788899887 67763399999999999998751   123566779999999999999999999999766

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

Probab=99.10  E-value=7.4e-12  Score=102.15  Aligned_cols=111  Identities=14%  Similarity=0.114  Sum_probs=79.3

Q ss_pred             HHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhccC---------
Q 013259          306 ETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTT---------  376 (447)
Q Consensus       306 l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~~---------  376 (447)
                      .+.+|..+|.|++ |.||.+||+.+|..+|     ..+++++++.++..+|.+++|.|+|+||++.+....         
T Consensus         2 ae~~F~~~D~d~d-G~is~~E~~~~l~~~~-----~~~~~~~~~~~~~~~D~~~~g~i~~~Ef~~~~~~~~~~~~~~~~~   75 (134)
T d1jfja_           2 AEALFKEIDVNGD-GAVSYEEVKAFVSKKR-----AIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKI   75 (134)
T ss_dssp             HHHHHHHHCTTCS-SEEEHHHHHHHHHTTC-----CSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHH
T ss_pred             HHHHHHHHcCCCc-CCCcHHHHHHHHHHcC-----CCCCHHHHHHHHHHhhhcccccccccccccccccccccccccccc
Confidence            3679999999999 9999999999999999     889999999999999999999999999997653211         


Q ss_pred             ----cccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          377 ----WSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       377 ----~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                          .+...+.+..|.+..++........|         .+.+..  +...+|.+.+|.|+
T Consensus        76 ~~~~~F~~~D~~~~g~i~~~el~~~~~~~~---------~~~~~~--~~~~~D~d~dG~is  125 (134)
T d1jfja_          76 GLKVLYKLMDVDGDGKLTKEEVTSFFKKHG---------IEKVAE--QVMKADANGDGYIT  125 (134)
T ss_dssp             HHHHHHHHHCCSSSSEEEHHHHHHHHTTTT---------CHHHHH--HHHHHHCSSSSEEE
T ss_pred             cccccccccccccCCcccHHHHHHHHHhcC---------cHHHHH--HHHHHCCCCCCCCC
Confidence                12233444444444444332222222         122222  34467788888876

>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.09  E-value=7.3e-11  Score=97.77  Aligned_cols=67  Identities=28%  Similarity=0.278  Sum_probs=62.5

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ....++.+|+.||.+++ |+|+..||+.+|+.+|     .++++++++.+++.+|.|++|+|+|.||++.|..
T Consensus        75 ~~~~l~~aF~~fD~~~~-g~I~~~el~~~l~~~g-----~~ls~~e~~~~~~~~d~d~dg~I~y~eF~~~l~~  141 (145)
T d2mysb_          75 PEDVIMGAFKVLDPDGK-GSIKKSFLEELLTTGG-----GRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITH  141 (145)
T ss_pred             hHHHHHHHHHhhhhccc-chhhHHHHHHHHHHcC-----CCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhcc
Confidence            44578999999999999 9999999999999999     8999999999999999999999999999987743

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=2.6e-10  Score=93.61  Aligned_cols=67  Identities=25%  Similarity=0.432  Sum_probs=62.2

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ......++.+|..+|.+++ |+|+..||+.+|..+|     ..++++++..+|+.+|.|+||+|+|+||+++|
T Consensus        75 ~~~~~~l~~~f~~~d~~~~-G~i~~~el~~~l~~~g-----~~l~~~e~~~l~~~~D~d~dG~i~~~EF~~~m  141 (141)
T d2obha1          75 KDTKEEILKAFKLFDDDET-GKISFKNLKRVAKELG-----ENLTDEELQEMIDEADRDGDGEVSEQEFLRIM  141 (141)
T ss_dssp             HHHHHHHHHHHHHHCTTCS-SSBCHHHHHHHHHHTT-----CCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHH
T ss_pred             hccHHHHHHHHHHhcccCC-CCccHHHHHHHHHHhC-----CCCCHHHHHHHHHHHCCCCCCCEeHHHHHHhC
Confidence            3445678999999999999 9999999999999999     89999999999999999999999999999765

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=1.9e-11  Score=100.65  Aligned_cols=119  Identities=13%  Similarity=0.172  Sum_probs=96.6

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc-------
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK-------  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~-------  374 (447)
                      +..+++++|..+|+|++ |+|+.+||+.+++.+|     ..++++.+..++..+|.+++|.|+++||+..+..       
T Consensus         4 ~~~elk~~F~~~D~~~~-G~Is~~e~~~~l~~~~-----~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~   77 (141)
T d2obha1           4 QKQEIREAFDLFDADGT-GTIDVKELKVAMRALG-----FEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDT   77 (141)
T ss_dssp             HHHHHHHHHHTTCTTCC-SEEEGGGHHHHHHHTT-----CCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCC-CeEeHHHHHHHHHhcC-----CchhHHHHHHHHHhhccCCCCeechHHHHHHHHHHHhhhcc
Confidence            56789999999999999 9999999999999999     8899999999999999999999999999976632       


Q ss_pred             ----cCcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          375 ----TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       375 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                          ...+...+.+..|.+...+........|..++...     +..  +...+|.+.+|.|+
T Consensus        78 ~~~l~~~f~~~d~~~~G~i~~~el~~~l~~~g~~l~~~e-----~~~--l~~~~D~d~dG~i~  133 (141)
T d2obha1          78 KEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEE-----LQE--MIDEADRDGDGEVS  133 (141)
T ss_dssp             HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHH-----HHH--HHHHHCTTSSSSBC
T ss_pred             HHHHHHHHHHhcccCCCCccHHHHHHHHHHhCCCCCHHH-----HHH--HHHHHCCCCCCCEe
Confidence                23445667777788887776666666776655554     233  55677888888875

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.05  E-value=5.9e-11  Score=99.55  Aligned_cols=66  Identities=20%  Similarity=0.438  Sum_probs=59.7

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .....++.+|+.||.|++ |+|+.+||+.++..+|     ..+++++++.+|+.+|.|+||.|+|+||+++|
T Consensus        88 ~~~~~l~~~F~~~D~d~~-G~I~~~e~~~~~~~~~-----~~ls~~e~~~i~~~~D~d~dG~I~~~eF~~~l  153 (156)
T d1dtla_          88 KSEEELSDLFRMFDKNAD-GYIDLEELKIMLQATG-----ETITEDDIEELMKDGDKNNDGRIDYDEFLEFM  153 (156)
T ss_dssp             CHHHHHHHHHHHHCTTCS-SEEEHHHHGGGGTTC-------CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHH
T ss_pred             cHHHHHHHHHHHhCcCCC-CcCcHHHHHHHHhhcC-----CCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHH
Confidence            345678899999999999 9999999999999999     88999999999999999999999999999765

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

Probab=99.04  E-value=1.5e-11  Score=106.17  Aligned_cols=102  Identities=16%  Similarity=0.151  Sum_probs=83.0

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc----cC
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TT  376 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~----~~  376 (447)
                      +..+.|+++|..+|.|++ |+|+.+||+.+|+.+|     ..+++++++.++..+|.|++|+|+|+||...+..    ..
T Consensus        15 ~~~~~l~~~F~~~D~d~d-G~Is~~El~~~l~~l~-----~~~s~~~~~~l~~~~d~d~~~~i~~~ef~~~~~~~~~~~~   88 (182)
T d1y1xa_          15 NDNQELMEWFRAVDTDGS-GAISVPELNAALSSAG-----VPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHFILSMRE   88 (182)
T ss_dssp             CTTSCHHHHHHHHCTTCS-SSBCHHHHHHHHCBTT-----BCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHcCCCc-CCCCHHHHHHHHHHhc-----ccCchhhhhhhhcccccccccccccccccccccccccccc
Confidence            345689999999999999 9999999999999999     8899999999999999999999999999876632    33


Q ss_pred             cccccccCCCcccccccccccccccceEEecc
Q 013259          377 WSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNA  408 (447)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  408 (447)
                      .+...|.+..|.+...+.......+|..++..
T Consensus        89 ~F~~~D~~~~g~I~~~el~~~l~~~g~~ls~~  120 (182)
T d1y1xa_          89 GFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQ  120 (182)
T ss_dssp             HHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHH
T ss_pred             chhccccccchhhhhHHHHHHHHHhCCchhHH
Confidence            34566777778887777655556666554443

>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]

Probab=99.04  E-value=3.5e-10  Score=84.00  Aligned_cols=73  Identities=12%  Similarity=0.098  Sum_probs=56.2

Q ss_pred             HhhhhhHHHHhhhh-cCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          300 RRASLTETDAFAFL-KADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       300 ~~~~~~l~~~F~~~-D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ......+..+|+.+ +++++.++|+.+||+++|+...-.......+++.++++|+.+|.|+||.|+|+||+.+|
T Consensus         4 E~ai~~li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD~n~Dg~idF~EF~~li   77 (87)
T d1e8aa_           4 EEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLV   77 (87)
T ss_dssp             HHHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcccCCCCCeEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHHcCCCCCcCCHHHHHHHH
Confidence            34566788899988 55666246999999999987420000134678999999999999999999999999655

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.03  E-value=3.9e-10  Score=94.98  Aligned_cols=66  Identities=20%  Similarity=0.443  Sum_probs=61.1

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .....++++|+.+|.|++ |+|+..||+.+|...|     ...++++++.+|..+|.|+||.|+|+||+++|
T Consensus        93 ~~~~~~~~aF~~~D~d~~-G~Is~~e~~~~l~~~~-----~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l  158 (162)
T d1topa_          93 KSEEELANCFRIFDKNAD-GFIDIEELGEILRATG-----EHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMM  158 (162)
T ss_dssp             HHHHHHHHHHHHHCTTCS-SCBCHHHHHHHHHTTT-----CCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred             CcHHHHHHHHHHHCCCCC-CCCcHHHHHHHHHhhC-----CCCCHHHHHHHHHHhCCCCCCcEEHHHHHHHH
Confidence            345577889999999999 9999999999999998     88999999999999999999999999999765

>d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]

Probab=99.02  E-value=5.4e-11  Score=88.80  Aligned_cols=67  Identities=15%  Similarity=0.194  Sum_probs=56.9

Q ss_pred             hhhhhHHHHhhhh-cCCCCCCc-ccHHHHHHHHHH-hccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          301 RASLTETDAFAFL-KADNDGDY-ITYSGFCEALEQ-LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       301 ~~~~~l~~~F~~~-D~~~~~G~-i~~~el~~~l~~-~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      .....+..+|+.+ |+||+ |. ++.+||+.+|.+ +|     ..+++++++++|+++|.|+||+|+|+||+.+|.
T Consensus         7 ~ai~~ii~~F~kya~~dG~-~~~l~~~Elk~ll~~e~~-----~~~~~~~v~~i~~~~D~n~DG~IdF~EF~~l~~   76 (87)
T d1xk4a1           7 KALNSIIDVYHKYSLIKGN-FHAVYRDDLKKLLETESP-----QYIRKKGADVWFKELDINTDGAVNFQEFLILVI   76 (87)
T ss_dssp             HHHHHHHHHHHHHHTSSSC-TTCBCHHHHHHHHHHHSC-----HHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcccCCC-CCccCHHHHHHHHHHhcC-----CccchHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            4556788899888 89999 75 599999999986 56     557778899999999999999999999996663

>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=1.6e-10  Score=94.80  Aligned_cols=66  Identities=17%  Similarity=0.333  Sum_probs=57.7

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      .....+.++|+.+|++++ |+|+.+||+.+|..+|     .++++++++.++.. |.|+||.|+|+||++.|+
T Consensus        74 ~~~~~l~~aF~~~D~d~~-G~I~~~el~~~l~~~g-----~~~~~~e~~~l~~~-~~d~dg~I~~~eF~~~ll  139 (139)
T d1w7jb1          74 GTYEDYLEGFRVFDKEGN-GKVMGAELRHVLTTLG-----EKMTEEEVETVLAG-HEDSNGCINYEAFLKHIL  139 (139)
T ss_dssp             ----CCHHHHHTTCTTSS-SEEEHHHHHHHHHHSS-----SCCCHHHHHHHHTT-CCCTTSEEEHHHHHHHTC
T ss_pred             cHHHHHHHhhhhccCCCC-CeEeHHHHHHHHHHhC-----CCCCHHHHHHHHhh-CCCCCCeEeHHHHHHHhC
Confidence            345678999999999999 9999999999999999     88999999999875 889999999999998663

>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Nucleobindin 1 (CALNUC)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=2.6e-10  Score=87.74  Aligned_cols=70  Identities=10%  Similarity=0.100  Sum_probs=53.9

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccC--CCCCC---------CCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLT--GHKHG---------LADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~--~~~~~---------~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      -.++.+|+.+|.|++ |+|+.+||+.+|+.++..  .....         ..+..++.+|..+|.|+||.|+|+||++++
T Consensus        16 ~~~r~~F~~~D~Dgd-G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~DG~Is~~EF~~~~   94 (99)
T d1snla_          16 FNPKTFFILHDINSD-GVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLAST   94 (99)
T ss_dssp             CCHHHHHHHHCSSCC-SEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHH
T ss_pred             cCHHHHHHHHCCCCC-CcCCHHHHHHHHHHHHHhcchhhhhhhhhhhhHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHH
Confidence            357889999999999 999999999999865310  00000         123457889999999999999999999765


Q ss_pred             hc
Q 013259          373 WK  374 (447)
Q Consensus       373 ~~  374 (447)
                      -+
T Consensus        95 ~~   96 (99)
T d1snla_          95 QR   96 (99)
T ss_dssp             HC
T ss_pred             hc
Confidence            43

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]

Probab=98.99  E-value=3.3e-10  Score=97.98  Aligned_cols=64  Identities=16%  Similarity=0.200  Sum_probs=55.8

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ..+..+|..+|+|++ |+|+.+||+.++..+|     ..+++++++.+|+.+|.|+||.|+|+||++.+.
T Consensus       107 ~~~~~~F~~~D~d~~-G~is~~E~~~~l~~~g-----~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~~~  170 (189)
T d1qv0a_         107 EWGDAVFDIFDKDGS-GTITLDEWKAYGKISG-----ISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHL  170 (189)
T ss_dssp             HHHHHHHHHTC-----CEECHHHHHHHHHHHS-----SCCCHHHHHHHHHHSCCCTTSCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHccCCC-CcccchhhHHHHHhcC-----CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence            356679999999999 9999999999999999     889999999999999999999999999997774

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=3.6e-10  Score=85.99  Aligned_cols=62  Identities=19%  Similarity=0.299  Sum_probs=56.5

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ....++++|..+| +++ |+|+.+|++.+|.+.|       ++.+++++|+..+|.|+||.|+|+||+..|
T Consensus         8 e~~~y~~~F~~~D-~~~-G~i~~~el~~~l~~~g-------l~~~~L~~Iw~~~D~~~dG~l~~~EF~~a~   69 (95)
T d2jxca1           8 DKAKYDAIFDSLS-PVN-GFLSGDKVKPVLLNSK-------LPVDILGRVWELSDIDHDGMLDRDEFAVAM   69 (95)
T ss_dssp             HHHHHHHHHHHTC-CBT-TEEEHHHHHHHHTTSS-------CCHHHHHHHHHHHCTTCSSEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHhC-CCC-CceeHHHHHHHHHHcC-------CCHHHHHHHHHHhcCCCCCeEcHHHHHHHH
Confidence            4457889999999 899 9999999999999888       789999999999999999999999998555

>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.98  E-value=9.5e-11  Score=96.99  Aligned_cols=101  Identities=13%  Similarity=0.124  Sum_probs=81.3

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCC--CCceeehHHHHHHHhc------
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADID--GNGVVDYKEFQQRIWK------  374 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~--~~g~i~~~EF~~~~~~------  374 (447)
                      ..+++++|..||.|++ |+|+.+||+.+|+.+|     ..++.+++..++..++.+  ++|.|+|+||+..+..      
T Consensus         3 ~eelke~F~~~D~d~~-G~I~~~el~~~l~~lg-----~~~~~~e~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~   76 (145)
T d2mysc_           3 ADDFKEAFLLFDRTGD-AKITASQVGDIARALG-----QNPTNAEINKILGNPSKEEMNAAAITFEEFLPMLQAAANNKD   76 (145)
T ss_pred             HHHHHHHHHHHcCCCC-CeECHHHHHHHHHHhh-----hcchhhhhHHHHHHHhhcccccCccchhHHHHHHhhhhhccc
Confidence            4689999999999999 9999999999999999     889999999999988666  5889999999976632      


Q ss_pred             -------cCcccccccCCCcccccccccccccccceEEeccc
Q 013259          375 -------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAV  409 (447)
Q Consensus       375 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  409 (447)
                             ...+...|.+..|.+...|.......+|..++...
T Consensus        77 ~~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e  118 (145)
T d2mysc_          77 QGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEE  118 (145)
T ss_pred             cchHHHHHHHHHHhhcCCCCEEcHHHHHHHHHHhCCCCCHHH
Confidence                   12335567777788888877766777775544433

>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.98  E-value=3.1e-10  Score=87.07  Aligned_cols=65  Identities=22%  Similarity=0.285  Sum_probs=59.0

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .......+++|+.+|+|++ |+|+.+|++.+|...|       ++.+++.+++..+|.|++|.|+++||+.+|
T Consensus         7 s~~~~~y~~~F~~~D~d~~-G~i~~~e~~~~l~~s~-------L~~~~L~~i~~~~D~d~dG~L~~~EF~~am   71 (99)
T d1qjta_           7 SSGNPVYEKYYRQVEAGNT-GRVLALDAAAFLKKSG-------LPDLILGKIWDLADTDGKGVLSKQEFFVAL   71 (99)
T ss_dssp             TTTCTHHHHHHHHHCCTTS-SCCCSHHHHHHHHTSS-------SCHHHHHHHHHHHCCSSSSSCCSHHHHHHH
T ss_pred             ccCcHHHHHHHHHHCCCCC-CcccHHHHHHHHHHcC-------CcHHHHHHHHHHHcCCCCCccCHHHHHHHH
Confidence            3444567789999999999 9999999999999877       899999999999999999999999999666

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

Probab=98.97  E-value=5.1e-10  Score=96.46  Aligned_cols=63  Identities=17%  Similarity=0.259  Sum_probs=59.6

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ..+..+|+.+|+|++ |+|+.+||+.+|+.+|     ..+++++++.+|..+|.|+||+|+|+||++.+
T Consensus       105 ~~~~~~F~~~D~d~~-G~Is~~El~~~l~~~g-----~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~~  167 (187)
T d1uhka1         105 IWGDALFDIVDKDQN-GAITLDEWKAYTKAAG-----IIQSSEDCEETFRVCDIDESGQLDVDEMTRQH  167 (187)
T ss_dssp             HHHHHHHHHHCTTCS-SEECHHHHHHHHHHHT-----SCCSHHHHHHHHHHSCCCTTSCEEHHHHHHHH
T ss_pred             HHHHHHHHHHccCCC-cccchHHHHHHHHHhC-----CCccHHHHHHHHHHhCCCCCCCEeHHHHHHHH
Confidence            457889999999999 9999999999999999     88999999999999999999999999999766

>d1i9za_ d.151.1.2 (A:) Synaptojanin, IPP5C domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: Inositol polyphosphate 5-phosphatase (IPP5)
domain: Synaptojanin, IPP5C domain
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=98.96  E-value=1.3e-09  Score=103.41  Aligned_cols=165  Identities=15%  Similarity=0.134  Sum_probs=84.8

Q ss_pred             ceeEEecccccccccCCCCCCCCCCCCCccCChhhHHHHHHHHHh---hCCCcE--EEEcccccC--------h----hh
Q 013259           29 CITCTTFNILAPIYKRLSNEDQNCRESDCRAYWFGRNQRILDWLL---YERSSI--ICLQEFWVG--------N----EE   91 (447)
Q Consensus        29 ~lrV~T~NV~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~i~~~I~---~~~~DI--I~LQEv~~~--------~----~~   91 (447)
                      .+.|+||||.+-            +.+          ..+.++|.   ...|||  |||||+...        +    ..
T Consensus        26 ~I~v~TWNv~~~------------~~~----------~~l~~~l~~~~~~~~DI~viglQEi~~~~~~~~~~~~~~~~~~   83 (345)
T d1i9za_          26 KIFVASYNLNGC------------SAT----------TKLENWLFPENTPLADIYVVGFQEIVQLTPQQVISADPAKRRE   83 (345)
T ss_dssp             EEEEEEEECTTC------------CCC----------SCCHHHHSCSSSCCCSEEEEEEECSSCCC-----CCCHHHHHH
T ss_pred             EEEEEEEcCCCc------------cCC----------cchHHhhccCCCCCCCEEEEEcccCCccchhhhcccCchhhHH
Confidence            577899999852            011          11345564   345897  889997311        1    11


Q ss_pred             HHHHHHHHhh-----hcCCcEEEecCCCCCCceEEEEEecCCceEeeeEEEEecCCCCchhhhhhhcccccccccccCCC
Q 013259           92 LVDMYEKRLS-----DAGYVNFKLARTNNRGDGLLTAVHKDYFRVVNYRDLLFNDFGDRVAQLLHVELIDPFSQCRNGDL  166 (447)
Q Consensus        92 ~~~~l~~~l~-----~~gy~~~~~~~~~~~~~G~ai~~rs~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  166 (447)
                      +...+...+.     ..+|.....  ..-.+.+++|++|.+..+.+..........+. .+.....    ..+..++...
T Consensus        84 w~~~~~~~~~~~~~~~~~Y~~v~~--~~~~g~~l~vf~r~~~~~~i~~v~~~~~~~g~-~g~~gnK----GaV~vr~~i~  156 (345)
T d1i9za_          84 WESCVKRLLNGKCTSGPGYVQLRS--GQLVGTALMIFCKESCLPSIKNVEGTVKKTGL-GGVSGNK----GAVAIRFDYE  156 (345)
T ss_dssp             HHHHHHHHHHHTCCSSCCEEEEEE--EEETTEEEEEEEEGGGGGGEEEEEEEEEECCC-C----CC----EEEEEEEEET
T ss_pred             HHHHHHHhccccccCCCCeEEEEE--ecccCcEEEEEEcchhccccccceeEEEecCc-CCcccCC----ceEEEEEEEC
Confidence            2333333332     134544432  23356788999887644432222111111110 0000000    0011233345


Q ss_pred             CCeEEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHHHcCCCCCcEEEeecCCCcc
Q 013259          167 RQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKEHNLKPIPIILCGDWNGSK  224 (447)
Q Consensus       167 g~~l~v~n~HL~~~~~~~~~~~R~~q~~~l~~~l~~~~~~~~~~~~pvIl~GDFN~~p  224 (447)
                      +..|+++|+||.++.  .....|..+...+++.+............++|++||||...
T Consensus       157 ~t~l~fvn~HL~ag~--~~~~~R~~~~~~i~~~l~~~~~~~~~~~d~v~~~GDlN~R~  212 (345)
T d1i9za_         157 DTGLCFITSHLAAGY--TNYDERDHDYRTIASGLRFRRGRSIFNHDYVVWFGDFNYRI  212 (345)
T ss_dssp             TEEEEEEEEECCCCS--SCHHHHHHHHHHHHHHCCCGGGCCTTSSSEEEEEEECCCCB
T ss_pred             CEEEEEEEecccCcc--cchHHHHHHHHHHHHhhccccccccccCceeEEeccccccc
Confidence            678999999997643  34456777777666554322222222456899999999854

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.94  E-value=9.2e-11  Score=98.97  Aligned_cols=121  Identities=17%  Similarity=0.219  Sum_probs=95.8

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc-----
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK-----  374 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~-----  374 (447)
                      .....+++++|..+|+|++ |+|+.+||+.+|..++     ..+++.+++.++..+|.+++|.|+|.||+..+..     
T Consensus        16 ~~~i~el~~~F~~~D~d~~-G~Is~~el~~~l~~~~-----~~~~~~~~~~~~~~~d~~~~~~~~~~e~~~~~~~~~~~~   89 (162)
T d1topa_          16 EEMIAEFKAAFDMFDADGG-GDISTKELGTVMRMLG-----QNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKED   89 (162)
T ss_dssp             HHHHHHHHHHHHTTTCSCS-SEEEGGGHHHHHHHTT-----CCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCC-CeEcHHHHHHHHhccC-----CchhHHHHHhhhheeccCCCCCeeeehhhhhhhhhhhhh
Confidence            4566789999999999999 9999999999999999     8899999999999999999999999999865522     


Q ss_pred             ---------cCcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          375 ---------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       375 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                               ...+...|.+..|.+...+........|...+..     ++..  +...+|.+.+|.|+
T Consensus        90 ~~~~~~~~~~~aF~~~D~d~~G~Is~~e~~~~l~~~~~~~~~~-----~~~~--l~~~~D~d~dG~Is  150 (162)
T d1topa_          90 AKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEE-----DIED--LMKDSDKNNDGRID  150 (162)
T ss_dssp             HHHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHH-----HHHH--HHHHHCTTCSSSBC
T ss_pred             cccCcHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhhCCCCCHH-----HHHH--HHHHhCCCCCCcEE
Confidence                     2234566777888888777665555555443332     2333  56778899999886

>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=98.91  E-value=2.8e-10  Score=98.01  Aligned_cols=118  Identities=18%  Similarity=0.204  Sum_probs=83.2

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhccCc---
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTTW---  377 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~~~---  377 (447)
                      .+...|+++|+.+|.|++ |+|+.+||+.+|+.+|     ..+++.+++.++..+|.+++|.|+|+||+..+.....   
T Consensus         7 ~ei~~l~~~F~~~D~d~d-G~Is~~e~~~~l~~l~-----~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~   80 (182)
T d1s6ia_           7 EEIGGLKELFKMIDTDNS-GTITFDELKDGLKRVG-----SELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLER   80 (182)
T ss_dssp             TTTCSHHHHHHTTSSSSS-SCEEHHHHHHHHTTTT-----CCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCC
T ss_pred             HHHHHHHHHHHHHcCCCc-CCCCHHHHHHHHHHcC-----CccccccchhhhhhhhccccccchHHHHHHHHHhhccccc
Confidence            345789999999999999 9999999999999999     8899999999999999999999999999965432111   


Q ss_pred             -------ccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          378 -------SDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       378 -------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                             +...+.+..|.+...+........|+       ...++..  +-..+|.+.||.|+
T Consensus        81 ~e~l~~aF~~~D~d~~G~i~~~el~~~l~~~gl-------~~~ev~~--~f~~~D~d~DG~Is  134 (182)
T d1s6ia_          81 EENLVSAFSYFDKDGSGYITLDEIQQACKDFGL-------DDIHIDD--MIKEIDQDNDGQID  134 (182)
T ss_dssp             CCSTHHHHHHTTTTCSSEEEHHHHHHTTTTTTC-------CTTHHHH--HHHHHCSSSSSEEE
T ss_pred             HHHHHHHHHHHhhcCCCccchhhhhhhhhhcCc-------cHHHHHH--HHHHhhcCCCCeEe
Confidence                   12233333444444333333333331       1122222  34567888888875

>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Sorcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=3.6e-10  Score=96.33  Aligned_cols=105  Identities=16%  Similarity=0.098  Sum_probs=83.4

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh----ccCc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW----KTTW  377 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~----~~~~  377 (447)
                      ....+++.|..++ ++| |.|+..||+.+|+.+|+......++.++++.++..+|.|++|.|+|+||+.++.    ....
T Consensus         5 ~~~~~~~~F~~~~-~~d-G~Is~~EL~~~L~~~g~~~~~~~~~~~~v~~l~~~~D~d~~G~I~f~EF~~~~~~~~~~~~~   82 (172)
T d1juoa_           5 TQDPLYGYFAAVA-GQD-GQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQH   82 (172)
T ss_dssp             CCCTTHHHHHHHH-TTT-TEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHhC-CCC-CCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHHCCCCCCceehHHHHHHHHhhhhhhHH
Confidence            3456889999997 788 999999999999999843222346789999999999999999999999996552    2444


Q ss_pred             ccccccCCCcccccccccccccccceEEecc
Q 013259          378 SDQRNDLNDEDEDGFVKSSLEQTIGFSVKNA  408 (447)
Q Consensus       378 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  408 (447)
                      +...|.+.+|.+...|.......+|+.+++.
T Consensus        83 f~~~D~d~sG~i~~~El~~~l~~~g~~ls~~  113 (172)
T d1juoa_          83 FISFDTDRSGTVDPQELQKALTTMGFRLSPQ  113 (172)
T ss_dssp             HHTTCTTCCSEECHHHHHHHHHHTTCCCCHH
T ss_pred             HHHhCcCCCCcCCHHHHHHHHHHHHHhhhHH
Confidence            5677888888888888777777777765543

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=98.90  E-value=2.5e-09  Score=90.74  Aligned_cols=64  Identities=19%  Similarity=0.297  Sum_probs=58.7

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .....++.+|..+|.|++ |+|+.+||+.++..+|       +++++++.+|..+|.|+||.|+|+||+..+
T Consensus        99 ~~~~~~~~~F~~~D~d~d-G~Is~~E~~~~~~~~~-------~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~  162 (176)
T d1nyaa_          99 VLGPVVKGIVGMCDKNAD-GQINADEFAAWLTALG-------MSKAEAAEAFNQVDTNGNGELSLDELLTAV  162 (176)
T ss_dssp             HHHHHHHHHHHHTCSSCC-SEEEHHHHHHHHHHTT-------CCHHHHHHHHHHHCTTCSSEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHccCCC-hhhhHHHHHHHHHhcC-------CcHHHHHHHHHHHCCCCCCcEeHHHHHHHH
Confidence            345577889999999999 9999999999999988       789999999999999999999999999655

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=3e-10  Score=95.99  Aligned_cols=101  Identities=12%  Similarity=0.104  Sum_probs=82.1

Q ss_pred             HHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc----cCccccc
Q 013259          306 ETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTWSDQR  381 (447)
Q Consensus       306 l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~----~~~~~~~  381 (447)
                      +.++|..+ .+.+ |.|+..||+.+|..+|.......++.+.++.||..+|.|++|.|+|+||+.++-.    +..+...
T Consensus         2 ~~~~F~~~-a~~d-G~I~~~EL~~~L~~~g~~~~~~~~s~~~~~~li~~~D~~~~G~i~~~EF~~l~~~~~~~~~~F~~f   79 (165)
T d1k94a_           2 VYTYFSAV-AGQD-GEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAALNAWKENFMTV   79 (165)
T ss_dssp             HHHHHHHH-HGGG-TSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHh-cCCC-CCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHhhccchhHHHHHHh
Confidence            34566666 5788 9999999999999998443334567899999999999999999999999965421    4556788


Q ss_pred             ccCCCcccccccccccccccceEEecc
Q 013259          382 NDLNDEDEDGFVKSSLEQTIGFSVKNA  408 (447)
Q Consensus       382 ~~~~~~~~~~~~~~~~~~~~g~~~~~~  408 (447)
                      |++.+|.++..|........|+++++.
T Consensus        80 D~d~sG~I~~~El~~~l~~~G~~l~~~  106 (165)
T d1k94a_          80 DQDGSGTVEHHELRQAIGLMGYRLSPQ  106 (165)
T ss_dssp             CTTCCSBCCHHHHHHHHHHTTCCCCHH
T ss_pred             CCCCCCeEcHHHHHHHHHHhhhcCCHH
Confidence            999999999999988888999876654

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=1.1e-09  Score=92.52  Aligned_cols=79  Identities=13%  Similarity=0.179  Sum_probs=65.9

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc----cCcc
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTWS  378 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~----~~~~  378 (447)
                      ...++.+|+.||+|++ |+|+.+||+.+|+.+|     ..+++++++.+++.+|.  ||.|+|+||+..|..    ...+
T Consensus        69 ~~~~~~~F~~fD~d~s-G~I~~~El~~~l~~~G-----~~l~~~~~~~l~~~~d~--~g~i~~~eFi~~~~~l~~~~~~F  140 (165)
T d1k94a_          69 LNAWKENFMTVDQDGS-GTVEHHELRQAIGLMG-----YRLSPQTLTTIVKRYSK--NGRIFFDDYVACCVKLRALTDFF  140 (165)
T ss_dssp             HHHHHHHHHHHCTTCC-SBCCHHHHHHHHHHTT-----CCCCHHHHHHHHHHHCB--TTBCBHHHHHHHHHHHHHHHHHH
T ss_pred             cchhHHHHHHhCCCCC-CeEcHHHHHHHHHHhh-----hcCCHHHHHHHHHHcCC--CCcCcHHHHHHHHHHHHHHHHHH
Confidence            3567889999999999 9999999999999999     88999999999999975  589999999977643    2334


Q ss_pred             cccccCCCccc
Q 013259          379 DQRNDLNDEDE  389 (447)
Q Consensus       379 ~~~~~~~~~~~  389 (447)
                      ...|.+.+|.+
T Consensus       141 ~~~D~d~~G~i  151 (165)
T d1k94a_         141 RKRDHLQQGSA  151 (165)
T ss_dssp             HTTCTTCCSEE
T ss_pred             HHhCCCCCCcE
Confidence            55666666655

>d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Pob1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=3e-10  Score=88.87  Aligned_cols=65  Identities=20%  Similarity=0.254  Sum_probs=57.9

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      .....++++|..+|+|++ |+|+.+|++.+|.+.|       ++.+++++|+..+|.|++|.|+++||+.+|.
T Consensus        19 ee~~~y~~lF~~~D~d~~-G~Is~~e~~~~l~~s~-------L~~~~L~~Iw~l~D~d~dG~l~~~EF~~am~   83 (110)
T d1iq3a_          19 EQREYYVNQFRSLQPDPS-SFISGSVAKNFFTKSK-------LSIPELSYIWELSDADCDGALTLPEFCAAFH   83 (110)
T ss_dssp             SSHHHHHHHHHHHCCSSS-SEEEHHHHHHHCCSSS-------CSSCCHHHHHHHHCSSSCSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCcc-cchhHHHHHHHHHhhc-------cchHHHHHHHHHhccCCCCeECHHHHHHHHH
Confidence            345677889999999999 9999999999998777       7788899999999999999999999986653

>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]

Probab=98.89  E-value=2.5e-10  Score=87.74  Aligned_cols=70  Identities=16%  Similarity=0.212  Sum_probs=53.6

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccC--CCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLT--GHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~--~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .....+..+|+.+| +++ |.|+..||+++|+..+..  ......++++++++|+.+|.|+||.|+|+||+.+|
T Consensus         7 ~~i~~l~~~F~~y~-~~d-G~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li   78 (100)
T d1psra_           7 RSIIGMIDMFHKYT-RRD-DKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLL   78 (100)
T ss_dssp             HHHHHHHHHHHHTC-CTT-SCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHc-CCC-CcccHHHHHHHHHHHccccccccccCCHHHHHHHHHHhcCCCCCcCcHHHHHHHH
Confidence            34556777888887 788 999999999999986400  00012345678999999999999999999999666

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Light Chain Mlc1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.89  E-value=1.2e-10  Score=96.61  Aligned_cols=116  Identities=9%  Similarity=0.106  Sum_probs=86.7

Q ss_pred             hHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHH-HcCCCCCceeehHHHHHHHhcc--------
Q 013259          305 TETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWV-QADIDGNGVVDYKEFQQRIWKT--------  375 (447)
Q Consensus       305 ~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~-~~D~~~~g~i~~~EF~~~~~~~--------  375 (447)
                      .++++|..||.|++ |+|+.+||+.+|+.+|     ..+++++++.++. ..+.+.+|.|+|+||...+...        
T Consensus         3 ~~k~~F~~~D~d~~-G~I~~~el~~~l~~lg-----~~~s~~ei~~l~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~   76 (146)
T d1m45a_           3 ANKDIFTLFDKKGQ-GAIAKDSLGDYLRAIG-----YNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATT   76 (146)
T ss_dssp             CCTTCHHHHCTTCC-SEEEGGGHHHHHHHTT-----CCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGG
T ss_pred             HHHHHHHHHcCCCc-CCCCHHHHHHHHHHcC-----CchhHHHHhhhhccccccccccccccchhhhhhhhhcccccccc
Confidence            46789999999999 9999999999999999     8899999999996 4566677999999999776321        


Q ss_pred             --------CcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          376 --------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       376 --------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                              ..+...|.+..|.+...+.......+|..++..     ++..  +...+|.+.+|.++
T Consensus        77 ~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~l~~~-----ei~~--l~~~~D~d~dG~I~  135 (146)
T d1m45a_          77 KAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDA-----EVDE--LLKGVEVDSNGEID  135 (146)
T ss_dssp             CCCTHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHH-----HHHH--HHTTCCCCTTSEEE
T ss_pred             cchHHHHHHHHHhhccccccccchhhhhhhhcccCCcchHH-----HHHH--HHHHhCCCCCCcEE
Confidence                    124566677777777777766666677654433     3333  55678999999764

>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=98.88  E-value=6.7e-10  Score=91.44  Aligned_cols=114  Identities=11%  Similarity=0.158  Sum_probs=86.6

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhcc-----
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT-----  375 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~-----  375 (447)
                      .+..+++++|..+|.|++ |.|+.+||+.+|+.+|     ..++++++..++.    +++|.|+|+||+..+...     
T Consensus         4 ~qi~e~~~~F~~~D~d~~-G~I~~~el~~~l~~lg-----~~~~~~el~~~~~----~~~~~i~~~eF~~~~~~~~~~~~   73 (142)
T d1wdcb_           4 KQIQEMKEAFSMIDVDRD-GFVSKEDIKAISEQLG-----RAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSGTD   73 (142)
T ss_dssp             HHHHHHHHHHHHHCTTCS-SSCCHHHHHHHHHHHS-----SCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCSCC
T ss_pred             HHHHHHHHHHHHHcCCCC-CcCChHHHHHHHHHhh-----cCCCHHHHHHHHH----hccCccccccccccccccccccc
Confidence            456789999999999999 9999999999999999     8899999998885    567999999999776432     


Q ss_pred             ------CcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCcce
Q 013259          376 ------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARL  432 (447)
Q Consensus       376 ------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  432 (447)
                            ..+...|.+..|.++..+......++|.+++..-     +..  +...+|.+ +|.+
T Consensus        74 ~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e-----~~~--l~~~~d~~-~G~I  128 (142)
T d1wdcb_          74 SEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDE-----MRM--TFKEAPVE-GGKF  128 (142)
T ss_dssp             CHHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHH-----HHH--HHHHCCEE-TTEE
T ss_pred             hhhhHHHhhhhhcccCCCcccHHHHHHHHHHccccCCHHH-----HHH--HHHHhCCC-CCEE
Confidence                  1234567778888888887777777776555443     222  33455655 4764

>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=98.82  E-value=6.2e-10  Score=92.76  Aligned_cols=101  Identities=10%  Similarity=0.023  Sum_probs=79.2

Q ss_pred             hhhhHHHHhhhhcC--CCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc-----
Q 013259          302 ASLTETDAFAFLKA--DNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK-----  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~--~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~-----  374 (447)
                      +..+++++|..||.  |++ |+|+.+||+.+|+.+|     ..++++++..++ ..|.+++|.|+|+||+..+..     
T Consensus         5 qi~~l~~~F~~fD~~~~~d-G~I~~~el~~~l~~lG-----~~~t~~e~~~~~-~~~~~~~~~i~~~eFl~~~~~~~~~~   77 (152)
T d1wdcc_           5 EIDDLKDVFELFDFWDGRD-GAVDAFKLGDVCRCLG-----INPRNEDVFAVG-GTHKMGEKSLPFEEFLPAYEGLMDCE   77 (152)
T ss_dssp             HHHHHHHHHHHHHHHTCSS-SCEEGGGHHHHHHHTT-----CCCCHHHHHHTT-CCSSTTSCEECHHHHHHHHHHHTTSC
T ss_pred             HHHHHHHHHHHHCcCCCCC-CeECHHHHHHHHHHhc-----cCccHhhhhhhh-hhhccccccccccccccccccccccc
Confidence            45678999999994  889 9999999999999999     889999998764 568899999999999976522     


Q ss_pred             -------cCcccccccCCCcccccccccccccccceEEeccc
Q 013259          375 -------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAV  409 (447)
Q Consensus       375 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  409 (447)
                             ...+...|.+..|.+...+.......+|..++..-
T Consensus        78 ~~~~~~l~~aF~~~D~~~~G~I~~~el~~~l~~~g~~ls~~e  119 (152)
T d1wdcc_          78 QGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDED  119 (152)
T ss_dssp             CCCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHH
T ss_pred             hhHHHhhhhhhhccccccCccchHHHHHHHHHHcCCCCCHHH
Confidence                   11234557777788887777666677776655443

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Cdc4p
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=98.81  E-value=7e-10  Score=91.10  Aligned_cols=113  Identities=10%  Similarity=0.060  Sum_probs=84.0

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhccC------
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTT------  376 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~~------  376 (447)
                      ...++++|..||.|++ |+|+.+||+.+|+.+|     .+++++++..+    +.+++|.|+|+||+..+....      
T Consensus         4 ~~~fke~F~~~D~d~d-G~I~~~el~~~l~~lg-----~~~t~~ei~~~----~~~~~~~i~~~eF~~~~~~~~~~~~~~   73 (140)
T d1ggwa_           4 DSPYKQAFSLFDRHGT-GRIPKTSIGDLLRACG-----QNPTLAEITEI----ESTLPAEVDMEQFLQVLNRPNGFDMPG   73 (140)
T ss_dssp             CTTTHHHHHHTCSSSS-SEECHHHHHHHHHHTS-----CCCCHHHHHHH----HTTSCSSEEHHHHHHHHCTTSSSSSSC
T ss_pred             HHHHHHHHHHHCCCCC-CeECHHHHHHHHHHHH-----hhhHHHhhhhh----hccccccccchhhhhhhhhhhhcchhh
Confidence            4577999999999999 9999999999999999     88999887764    567889999999997774321      


Q ss_pred             -------cccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          377 -------WSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       377 -------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                             .+...|.+..|.++..+.......+|.+++..-     +..  ....+|.+ +|.++
T Consensus        74 ~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e-----~~~--l~~~~d~~-dG~I~  129 (140)
T d1ggwa_          74 DPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEE-----MDE--LLKGVPVK-DGMVN  129 (140)
T ss_dssp             CHHHHHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHH-----HHH--HHHHTTCS-SCCST
T ss_pred             HHHHHHHHHHHHhccCCCcchHHHHHHHHHHcCCCCCHHH-----HHH--HHHhhCCC-CCEEe
Confidence                   234567777788887777666667776544443     222  33456666 67653

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

Probab=98.80  E-value=3.7e-09  Score=90.72  Aligned_cols=63  Identities=13%  Similarity=0.196  Sum_probs=59.6

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ..+.++|+.+|.+++ |+|+.+||+.+|..+|     ..+++++++.+++.+|.|++|.|+|+||++.|
T Consensus        84 ~~~~~~F~~~D~~~~-g~I~~~el~~~l~~~g-----~~ls~~e~~~i~~~~d~~~dg~I~~~eF~~~~  146 (182)
T d1y1xa_          84 LSMREGFRKRDSSGD-GRLDSNEVRAALLSSG-----YQVSEQTFQALMRKFDRQRRGSLGFDDYVELS  146 (182)
T ss_dssp             HHHHHHHHHHCTTSS-SCBCHHHHHHHHHTTS-----CCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred             cccccchhccccccc-hhhhhHHHHHHHHHhC-----CchhHHHHHHHHhhcccCCCCCcCHHHHHHHH
Confidence            457888999999999 9999999999999999     88999999999999999999999999999876

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

Probab=98.80  E-value=3e-09  Score=90.40  Aligned_cols=63  Identities=14%  Similarity=0.148  Sum_probs=57.6

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ...+..+|+.+|+|++ |+|+.+||+.+++.+|       ++.+++..+|+.+|.|+||+|+|+||+..+.
T Consensus        93 ~~~~~~~F~~~D~d~d-G~Is~~E~~~~l~~~~-------~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~  155 (174)
T d2scpa_          93 EGPLPLFFRAVDTNED-NNISRDEYGIFFGMLG-------LDKTMAPASFDAIDTNNDGLLSLEEFVIAGS  155 (174)
T ss_dssp             HTHHHHHHHHHCTTCS-SSEEHHHHHHHHHHTT-------CCGGGHHHHHHHHCTTCSSEECHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCcc-ccCCHHHHHHHHHHHh-------hhhHHHHHHHhhcCCCCCCcEeHHHHHHHHH
Confidence            4467889999999999 9999999999999988       7788899999999999999999999997663

>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), M-type [TaxId: 10116]

Probab=98.78  E-value=1.5e-09  Score=93.55  Aligned_cols=102  Identities=19%  Similarity=0.125  Sum_probs=84.2

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCC---CCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc----cC
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTG---HKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TT  376 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~---~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~----~~  376 (447)
                      ..++++|..+| |++ |.|+..||+.+|..+|...   ....++.+++..+|..+|.|++|+|+|+||+..+..    ..
T Consensus        18 ~~~r~~F~~~d-~~d-G~Is~~EL~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~~~   95 (186)
T d1df0a1          18 DGFRRLFAQLA-GED-AEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTKIQKYQK   95 (186)
T ss_dssp             HHHHHHHHHHH-GGG-TCEEHHHHHHHHHHHHHC----CCCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHc-CCC-CeEcHHHHHHHHHHhcccccccccccCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhHHHHHH
Confidence            45889999999 899 9999999999999876321   124578899999999999999999999999965421    44


Q ss_pred             cccccccCCCcccccccccccccccceEEec
Q 013259          377 WSDQRNDLNDEDEDGFVKSSLEQTIGFSVKN  407 (447)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  407 (447)
                      .+...|.+.+|.++..|........|+.+++
T Consensus        96 ~F~~~D~d~sG~I~~~El~~~l~~~g~~~~~  126 (186)
T d1df0a1          96 IYREIDVDRSGTMNSYEMRKALEEAGFKLPC  126 (186)
T ss_dssp             HHHHHCTTCCSCEEGGGHHHHHHHTTEECCH
T ss_pred             HHHhhCCCCCCcccHHHHHHHHHHHHhcccH
Confidence            5678889999999999988888888887654

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Apoptosis-linked protein alg-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.76  E-value=1e-09  Score=94.27  Aligned_cols=98  Identities=12%  Similarity=0.053  Sum_probs=74.9

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc----cCccc
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTWSD  379 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~----~~~~~  379 (447)
                      ..|..+|..+|+|++ |+||.+||+.+|+.++.    ...+.++++.+++.+|.|++|.|+|+||+..+..    ...+.
T Consensus        19 ~~L~~iF~~~D~d~~-G~Is~~E~~~~l~~~~~----~~~~~~~~~~l~~~~D~d~~g~i~~~EFl~~~~~~~~~~~~f~   93 (181)
T d1hqva_          19 SFLWNVFQRVDKDRS-GVISDNELQQALSNGTW----TPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFR   93 (181)
T ss_dssp             HHHHHHHHHHCTTCC-SSBCHHHHHHHCCCSSS----SCCCHHHHHHHHHHHCCSSSSSBCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCC-CcCcHHHHHHHHHHcCC----CcccHHHHHHHhhccccccccchhhhHHHhhhhhccccccccc
Confidence            468889999999999 99999999999988762    3478899999999999999999999999965522    22334


Q ss_pred             ccccCCCcccccccccccccccceEEe
Q 013259          380 QRNDLNDEDEDGFVKSSLEQTIGFSVK  406 (447)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~~~~~g~~~~  406 (447)
                      ..+.+..|.+...+........|..++
T Consensus        94 ~~D~~~~G~i~~~el~~~l~~~~~~l~  120 (181)
T d1hqva_          94 TYDRDNSGMIDKNELKQALSGFGYRLS  120 (181)
T ss_dssp             HHCTTCCSSBCHHHHHHHHHHHTBCCC
T ss_pred             cccccccchhhhHHHHHHHHHcCCcch
Confidence            456666676666665544445554433

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=98.76  E-value=1.2e-09  Score=93.79  Aligned_cols=61  Identities=10%  Similarity=0.127  Sum_probs=56.0

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ..+..+|+.+|.|++ |+|+.+||+.+|..+|       +++++++.++..+|.|+||.|+|+||++.+
T Consensus       105 ~~~~~~F~~~D~d~~-G~Is~~E~~~~l~~~~-------l~~~~~~~~f~~~D~d~dG~i~~~EF~~~~  165 (185)
T d2sasa_         105 NRIPFLFKGMDVSGD-GIVDLEEFQNYCKNFQ-------LQCADVPAVYNVITDGGKVTFDLNRYKELY  165 (185)
T ss_dssp             HHHHHHHHHHCTTSS-SCCCHHHHHHHTTSSC-------CCCSSHHHHHHHHHTTTTSCCSHHHHHHHH
T ss_pred             HHHHHHHHHHccCCC-ccCCHHHHHHHHHHcC-------CCHHHHHHHHHHcCCCCCCCCcHHHHHHHH
Confidence            357889999999999 9999999999999887       678899999999999999999999999655

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

Probab=98.76  E-value=4.9e-09  Score=90.32  Aligned_cols=79  Identities=13%  Similarity=0.085  Sum_probs=61.9

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc----cCccc
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTWSD  379 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~----~~~~~  379 (447)
                      ..++.+|+.+|+|++ |.|+..||+.+|..+|     ..++++.++.++.. |.|++|.|+|+||+..|..    ...+.
T Consensus        93 ~~~~~~F~~~D~d~s-G~i~~~El~~~l~~~g-----~~~~~~~~~~l~~~-~~~~dg~i~f~eFi~~~~~l~~~~~~F~  165 (188)
T d1qxpa2          93 RNYLTIFRKFDLDKS-GSMSAYEMRMAIEAAG-----FKLPCQLHQVIVAR-FADDELIIDFDNFVRCLVRLEILFKIFK  165 (188)
T ss_dssp             HHHHHHHGGGCTTCC-SCCBHHHHHHHHHHTT-----EECCHHHHHHHHHH-TSCSSSBCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCC-CEECHHHHHHHHHHhh-----hcCCHHHHHHHHHH-hcCCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence            467889999999999 9999999999999999     77888877777766 5699999999999976633    12234


Q ss_pred             ccccCCCccc
Q 013259          380 QRNDLNDEDE  389 (447)
Q Consensus       380 ~~~~~~~~~~  389 (447)
                      ..|.+..|.+
T Consensus       166 ~~D~~~~G~i  175 (188)
T d1qxpa2         166 QLDPENTGTI  175 (188)
T ss_dssp             HSCSSCCSCE
T ss_pred             HhCCCCCCeE
Confidence            4455544433

>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=7.7e-10  Score=90.59  Aligned_cols=99  Identities=14%  Similarity=0.125  Sum_probs=78.8

Q ss_pred             hHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCC--CCCceeehHHHHHHHhcc-------
Q 013259          305 TETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADI--DGNGVVDYKEFQQRIWKT-------  375 (447)
Q Consensus       305 ~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~--~~~g~i~~~EF~~~~~~~-------  375 (447)
                      +++++|..||+|++ |+|+.+||+.+|+.+|     ..++++++..++..++.  +++|.|+|.||...+...       
T Consensus         1 e~ke~F~~~D~d~~-G~I~~~el~~~l~~lg-----~~~t~~e~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~   74 (139)
T d1w7jb1           1 EFKEAFELFDRVGD-GKILYSQCGDVMRALG-----QNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQG   74 (139)
T ss_dssp             CHHHHHHHHCCSSS-SEEESTTHHHHHHHTT-----CCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC-----
T ss_pred             CHHHHHHHHhCCCC-CeECHHHHHHHHHHhc-----cCCCHHHHHHHHHHHhcccccCCceeeeccchhhHhhhhhcccc
Confidence            47899999999999 9999999999999999     88999999999988874  678999999999766321       


Q ss_pred             ------CcccccccCCCcccccccccccccccceEEeccc
Q 013259          376 ------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAV  409 (447)
Q Consensus       376 ------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  409 (447)
                            ..+...|.+..|.+..++.......+|..++...
T Consensus        75 ~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e  114 (139)
T d1w7jb1          75 TYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEE  114 (139)
T ss_dssp             ---CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHH
T ss_pred             HHHHHHHhhhhccCCCCCeEeHHHHHHHHHHhCCCCCHHH
Confidence                  1234566777777777777666666775544433

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.73  E-value=2.2e-09  Score=89.62  Aligned_cols=120  Identities=18%  Similarity=0.201  Sum_probs=92.8

Q ss_pred             hhhhhHHHHhhhhcCCC-CCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhcc----
Q 013259          301 RASLTETDAFAFLKADN-DGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT----  375 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~-~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~----  375 (447)
                      ....+++++|..||.|+ + |.|+..||+.+|+.+|     ..+++.++..++..++.+++|.|++++|...+...    
T Consensus        11 ~~~~~l~~~F~~~D~d~~d-G~I~~~e~~~~l~~lg-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (156)
T d1dtla_          11 EQKNEFKAAFDIFVLGAED-GSISTKELGKVMRMLG-----QNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDD   84 (156)
T ss_dssp             HHHHHHHHHHHHHTTTCGG-GSBCHHHHHHHHHHTT-----CCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHHHcCCCCC-CeECHHHHHHHHHHcC-----CCCCHHHHHHHHHHhhccCCCccchhhhhhhhhhccccc
Confidence            45668899999999995 8 9999999999999999     88999999999999999999999999998655321    


Q ss_pred             ----------CcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          376 ----------TWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       376 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                                ..+...|.+..|.++..+........|..++...     +..  +...+|.+.+|.++
T Consensus        85 ~~~~~~~~l~~~F~~~D~d~~G~I~~~e~~~~~~~~~~~ls~~e-----~~~--i~~~~D~d~dG~I~  145 (156)
T d1dtla_          85 SKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDD-----IEE--LMKDGDKNNDGRID  145 (156)
T ss_dssp             ---CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHH-----HHH--HHHHHCTTSSSEEE
T ss_pred             ccccHHHHHHHHHHHhCcCCCCcCcHHHHHHHHhhcCCCCCHHH-----HHH--HHHHhCCCCCCeEe
Confidence                      2345667777788887777666666665444433     233  45577888888775

>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), M-type [TaxId: 10116]

Probab=98.73  E-value=2.9e-09  Score=91.79  Aligned_cols=79  Identities=14%  Similarity=0.127  Sum_probs=63.4

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc----cCccc
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTWSD  379 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~----~~~~~  379 (447)
                      ..++.+|+.+|+|++ |+|+..||+.+|+.+|     ..++++.+ +++..+|.|++|.|+|+||+..|..    ...+.
T Consensus        91 ~~~~~~F~~~D~d~s-G~I~~~El~~~l~~~g-----~~~~~~~~-~~~~~~d~d~dg~I~f~eFi~~~~~l~~~~~~F~  163 (186)
T d1df0a1          91 QKYQKIYREIDVDRS-GTMNSYEMRKALEEAG-----FKLPCQLH-QVIVARFADDELIIDFDNFVRCLVRLEILFKIFK  163 (186)
T ss_dssp             HHHHHHHHHHCTTCC-SCEEGGGHHHHHHHTT-----EECCHHHH-HHHHHHHCCSTTEECHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhCCCCC-CcccHHHHHHHHHHHH-----hcccHHHH-HHHHHHHcCCCCeEeHHHHHHHHHHHHHHHHHHH
Confidence            567889999999999 9999999999999999     77887655 5666789999999999999987744    22344


Q ss_pred             ccccCCCccc
Q 013259          380 QRNDLNDEDE  389 (447)
Q Consensus       380 ~~~~~~~~~~  389 (447)
                      ..|.+..|.+
T Consensus       164 ~~D~~~~G~i  173 (186)
T d1df0a1         164 QLDPENTGTI  173 (186)
T ss_dssp             HHCTTCCSEE
T ss_pred             HhCCCCCCcE
Confidence            5555555544

>d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Cow (Bos taurus), s100b [TaxId: 9913]

Probab=98.72  E-value=2e-08  Score=74.49  Aligned_cols=70  Identities=21%  Similarity=0.324  Sum_probs=54.5

Q ss_pred             hhhhhHHHHhhhhc-CCCCCCcccHHHHHHHHHH-hc-cCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          301 RASLTETDAFAFLK-ADNDGDYITYSGFCEALEQ-LN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       301 ~~~~~l~~~F~~~D-~~~~~G~i~~~el~~~l~~-~g-~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .....+..+|+.+. ++|+.+.||..||+++|++ ++ +.  ....++..++++|+.+|.|+||.|+|+||+.++
T Consensus         6 ~ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l--~~~~d~~~~d~~m~~LD~n~Dg~vdF~EF~~li   78 (90)
T d3cr5x1           6 KAVVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFL--EEIKEQEVVDKVMETLDSDGDGECDFQEFMAFV   78 (90)
T ss_dssp             HHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTS--CCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHHHHHh--cCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHH
Confidence            44567888999874 5666357999999999987 21 00  044567889999999999999999999999655

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=1.4e-08  Score=87.45  Aligned_cols=73  Identities=19%  Similarity=0.353  Sum_probs=57.0

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhc-cCCC------CCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLN-LTGH------KHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g-~~~~------~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      .....++.+|+.||.|++ |+|+.+||..++..+. ..+.      .....++.++.+|+.+|.|+||.|+|+||.+.+.
T Consensus        93 ~~~e~l~~~F~~~D~d~d-G~i~~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG~Is~~EF~~~~~  171 (187)
T d1g8ia_          93 TLDEKLRWAFKLYDLDND-GYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSK  171 (187)
T ss_dssp             CHHHHHHHHHHHHCTTCS-SEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHHHHH
T ss_pred             chhhhHHHHHHHHhcCCC-CeEcHHHHHHHHHHHhhhhcccccCchhhccHHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence            345568889999999999 9999999999987541 0000      0223456789999999999999999999998775


Q ss_pred             c
Q 013259          374 K  374 (447)
Q Consensus       374 ~  374 (447)
                      .
T Consensus       172 ~  172 (187)
T d1g8ia_         172 A  172 (187)
T ss_dssp             H
T ss_pred             H
Confidence            4

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

Probab=98.71  E-value=5.6e-09  Score=84.44  Aligned_cols=61  Identities=16%  Similarity=0.278  Sum_probs=54.0

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ...++.+|+.+|.+++ |+|+.+||+.++..++         .+++..+|..+|.|+||.|+|+||++.|+
T Consensus        74 ~~~~~~~F~~~D~~~~-g~i~~~el~~~~~~~~---------~~~~~~~~~~~D~d~dG~is~~EF~~~~l  134 (134)
T d1jfja_          74 KIGLKVLYKLMDVDGD-GKLTKEEVTSFFKKHG---------IEKVAEQVMKADANGDGYITLEEFLEFSL  134 (134)
T ss_dssp             HHHHHHHHHHHCCSSS-SEEEHHHHHHHHTTTT---------CHHHHHHHHHHHCSSSSEEEHHHHHHHHC
T ss_pred             cccccccccccccccC-CcccHHHHHHHHHhcC---------cHHHHHHHHHHCCCCCCCCCHHHHHHHhC
Confidence            3467889999999999 9999999999987665         36788899999999999999999998763

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=8.1e-09  Score=88.36  Aligned_cols=73  Identities=22%  Similarity=0.395  Sum_probs=55.7

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHH----HHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEE----TKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~----~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      .....++.+|+.||.|++ |+|+.+||..+++.+--.+....+++++    +..+++.+|.|+||+|+|+||.+.+..
T Consensus        92 ~~~~kl~~~F~~~D~d~~-G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~dG~Is~~EF~~~~~~  168 (180)
T d1xo5a_          92 TPDIKSHYAFRIFDFDDD-GTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR  168 (180)
T ss_dssp             CHHHHHHHHHHHHCTTCS-SSBCHHHHHHHHHHHC------CCCCTTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             CHHHHHHHhhccccCCCC-CeeeHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence            345678889999999999 9999999999998762000113455444    556889999999999999999987753

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.70  E-value=1.4e-08  Score=86.79  Aligned_cols=74  Identities=16%  Similarity=0.287  Sum_probs=59.7

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccC-C------CCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLT-G------HKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~-~------~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ......++.+|+.+|.|++ |+|+.+|+..++..+.-. .      ......++.++.+|+.+|.|+||.|+|+||++.+
T Consensus        91 ~~~~~~~~~~f~~~D~d~d-g~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~  169 (181)
T d1bjfa_          91 GKLEQKLKWAFSMYDLDGN-GYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGA  169 (181)
T ss_dssp             SCHHHHHHHHHHHHCTTCS-SCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHHHHH
T ss_pred             hchHHHHHHHHHHhccCCC-CeecHHHHHHHHHHHhhhccccccCCcccccHHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence            3445678889999999999 999999999999875200 0      0124566789999999999999999999999877


Q ss_pred             hc
Q 013259          373 WK  374 (447)
Q Consensus       373 ~~  374 (447)
                      ..
T Consensus       170 ~~  171 (181)
T d1bjfa_         170 KS  171 (181)
T ss_dssp             HH
T ss_pred             Hh
Confidence            54

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Apoptosis-linked protein alg-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.70  E-value=1.1e-08  Score=87.71  Aligned_cols=80  Identities=20%  Similarity=0.175  Sum_probs=66.5

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc----cCccc
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTWSD  379 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~----~~~~~  379 (447)
                      ..++.+|+.+|++++ |+|+.+||+.+|...|     ..+++++++.+++.+|.+++|+|+|+||+..+..    ...+.
T Consensus        86 ~~~~~~f~~~D~~~~-G~i~~~el~~~l~~~~-----~~l~~e~~~~~~~~~d~~~dg~Is~~eF~~~~~~l~~l~~~F~  159 (181)
T d1hqva_          86 TDWQNVFRTYDRDNS-GMIDKNELKQALSGFG-----YRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFR  159 (181)
T ss_dssp             HHHHHHHHHHCTTCC-SSBCHHHHHHHHHHHT-----BCCCHHHHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccc-chhhhHHHHHHHHHcC-----CcchhHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHHHHHH
Confidence            457889999999999 9999999999999999     8899999999999999999999999999976632    22333


Q ss_pred             ccccCCCccc
Q 013259          380 QRNDLNDEDE  389 (447)
Q Consensus       380 ~~~~~~~~~~  389 (447)
                      ..|.+..|.+
T Consensus       160 ~~D~~~dG~i  169 (181)
T d1hqva_         160 RYDTDQDGWI  169 (181)
T ss_dssp             HHCTTCSSCC
T ss_pred             HhCCCCCCCE
Confidence            4455555543

>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=98.69  E-value=4.2e-09  Score=90.37  Aligned_cols=68  Identities=26%  Similarity=0.429  Sum_probs=60.7

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhccCc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTTW  377 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~~~  377 (447)
                      ....++.+|..+|.+++ |+|+..||+.++..+|       +++++++.+|+.+|.|+||+|+|+||++.|.....
T Consensus        80 ~~e~l~~aF~~~D~d~~-G~i~~~el~~~l~~~g-------l~~~ev~~~f~~~D~d~DG~Is~~EF~~~m~~~~~  147 (182)
T d1s6ia_          80 REENLVSAFSYFDKDGS-GYITLDEIQQACKDFG-------LDDIHIDDMIKEIDQDNDGQIDYGEFAAMMRKRKG  147 (182)
T ss_dssp             CCCSTHHHHHHTTTTCS-SEEEHHHHHHTTTTTT-------CCTTHHHHHHHHHCSSSSSEEETTHHHHTTSCCCS
T ss_pred             cHHHHHHHHHHHhhcCC-CccchhhhhhhhhhcC-------ccHHHHHHHHHHhhcCCCCeEeHHHHHHHHHhCcC
Confidence            44578899999999999 9999999999999887       78899999999999999999999999977755443

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.68  E-value=6.2e-09  Score=85.79  Aligned_cols=119  Identities=18%  Similarity=0.245  Sum_probs=93.1

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc------
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK------  374 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~------  374 (447)
                      ....+++++|+.+|.|++ |+|+.+||+.+|...|     ..+++.++..++..++.++++.++|++|+..+..      
T Consensus         7 ~~i~~l~~~F~~~D~d~~-G~i~~~e~~~~l~~~g-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (146)
T d1lkja_           7 EQIAEFKEAFALFDKDNN-GSISSSELATVMRSLG-----LSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSND   80 (146)
T ss_dssp             HHHHHHHHHHHHHCCSSS-SEEEHHHHHHHHHHHT-----CCCCHHHHHHHHHHHCSSSCCEEEHHHHHHHHHHHTCCCC
T ss_pred             HHHHHHHHHHHHHCCCCC-CcEeHHHHHHHHHhcC-----CCCCHHHHHHHHHHhccCCcccccHHHHHHHHHHhhcccc
Confidence            355689999999999999 9999999999999999     8899999999999999999999999999976632      


Q ss_pred             -----cCcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          375 -----TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       375 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                           ...+...|.+..|.+..+|.......+|..++...+     .+  +...++ +.+|.++
T Consensus        81 ~~~~~~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~-----~~--~~~~~d-d~dG~I~  136 (146)
T d1lkja_          81 SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEV-----DD--MLREVS-DGSGEIN  136 (146)
T ss_dssp             HHHHHHHHHHHHCSSSSCEEEHHHHHHHHHHHTCSCCHHHH-----HH--HHHHHC-CSSSEEE
T ss_pred             HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCcccHHHH-----HH--HHHhcc-CCCCeEe
Confidence                 223456678888888888877667777765544432     22  333445 6677653

>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.68  E-value=1.9e-09  Score=89.00  Aligned_cols=117  Identities=10%  Similarity=0.041  Sum_probs=80.1

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhccCc---
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKTTW---  377 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~~~---  377 (447)
                      ++..+++++|..+|.+++ |+|+.+||+.+|+.+|     ..++..+   ++..++.+++|.|+|+||+..+.....   
T Consensus         4 ~qi~el~e~F~~~D~~~~-G~I~~~e~~~~l~~lg-----~~~~~~~---~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~   74 (145)
T d2mysb_           4 TEIEDFKEAFTVIDQNAD-GIIDKDDLRETFAAMG-----RLNVKNE---ELDAMIKEASGPINFTVFLTMFGEKLKGAD   74 (145)
T ss_pred             HHHHHHHHHHHHHCCCCC-CCCCHHHHHHHHHHhC-----CCcchHH---HHHHHHHhccCceeechhhhhhhhcccccc
Confidence            355678999999999999 9999999999999999     5444433   344556678899999999976644211   


Q ss_pred             --------ccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          378 --------SDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       378 --------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                              +...|.+..|.+...+...-...+|.+++..     ++..  +...++.+.+|.++
T Consensus        75 ~~~~l~~aF~~fD~~~~g~I~~~el~~~l~~~g~~ls~~-----e~~~--~~~~~d~d~dg~I~  131 (145)
T d2mysb_          75 PEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPE-----EIKN--MWAAFPPDVAGNVD  131 (145)
T ss_pred             hHHHHHHHHHhhhhcccchhhHHHHHHHHHHcCCCCCHH-----HHHH--HHHHhCCCCCCeEe
Confidence                    2344555556666666555555556443333     2333  45567778888764

>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain small (regulatory) subunit (domain VI)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.67  E-value=3.8e-09  Score=89.83  Aligned_cols=103  Identities=14%  Similarity=0.127  Sum_probs=79.9

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCC---CCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc----
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGH---KHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~---~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~----  374 (447)
                      +..+++++|..+| +++ |.|+..||+.+|..+|....   ...++.+.++.++..+|.|++|.|+|+||+..+-.    
T Consensus         2 e~~~~r~~F~~~d-~~d-g~I~~~EL~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~d~d~~g~i~~~ef~~~~~~~~~~   79 (173)
T d1alva_           2 EVRQFRRLFAQLA-GDD-MEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKW   79 (173)
T ss_dssp             HHHHHHHHHHHHH-GGG-TSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHc-CCC-CcCCHHHHHHHHHHhCCCcchhhhccCCHHHHHHHHHHhccCCCCcccchhhhhhhhhhhHH
Confidence            3467899999999 458 99999999999999873211   12367899999999999999999999999865421    


Q ss_pred             cCcccccccCCCcccccccccccccccceEEe
Q 013259          375 TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVK  406 (447)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  406 (447)
                      ...+...|.+.+|.++..|........|..++
T Consensus        80 ~~~f~~~D~d~~G~I~~~el~~~L~~~g~~~~  111 (173)
T d1alva_          80 QAIYKQFDVDRSGTIGSSELPGAFEAAGFHLN  111 (173)
T ss_dssp             HHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCC
T ss_pred             HHHHHHhccCCCCeecHHHHHHHHHHHHHhhH
Confidence            33445667888888888887766666675544

>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain small (regulatory) subunit (domain VI)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.63  E-value=1.4e-08  Score=86.23  Aligned_cols=79  Identities=13%  Similarity=0.075  Sum_probs=63.6

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc----cCccc
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTWSD  379 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~----~~~~~  379 (447)
                      ..++.+|+.||.|++ |.|+..||+.+|+..|     ..+++++++.++ .+|.|++|.|+|+||+++|..    ...+.
T Consensus        77 ~~~~~~f~~~D~d~~-G~I~~~el~~~L~~~g-----~~~~~~~~~~~~-~~d~d~~G~i~~~EF~~~~~~~~~~~~~f~  149 (173)
T d1alva_          77 KKWQAIYKQFDVDRS-GTIGSSELPGAFEAAG-----FHLNEHLYSMII-RRYSDEGGNMDFDNFISCLVRLDAMFRAFK  149 (173)
T ss_dssp             HHHHHHHHHHCTTCC-SSBCTTTHHHHHHHHT-----CCCCHHHHHHHH-HHHTCSSSCBCHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHhccCCC-CeecHHHHHHHHHHHH-----HhhHHHHHHHhh-ccccCCCCeEeHHHHHHHHHHHHHHHHHHH
Confidence            457789999999999 9999999999999999     889988887666 556699999999999987733    22344


Q ss_pred             ccccCCCccc
Q 013259          380 QRNDLNDEDE  389 (447)
Q Consensus       380 ~~~~~~~~~~  389 (447)
                      ..|.+..|.+
T Consensus       150 ~~D~d~~G~i  159 (173)
T d1alva_         150 SLDKDGTGQI  159 (173)
T ss_dssp             HHSSSCCSEE
T ss_pred             HhCCCCCCcE
Confidence            5566666654

>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=98.62  E-value=6.1e-09  Score=61.04  Aligned_cols=32  Identities=19%  Similarity=0.366  Sum_probs=29.4

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhc
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLN  335 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g  335 (447)
                      .++++++|+.||+|++ |+|+..||+.+|+.+|
T Consensus         2 eeel~eAF~~FDkDg~-G~Is~~EL~~vm~~lG   33 (33)
T d2hf5a1           2 EEEIREAFRVFDKDGN-GYISAAELRHVMTNLG   33 (33)
T ss_dssp             HHHHHHHHHHHSSSCC-SCBCHHHHHHHTTSCC
T ss_pred             HHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHcC
Confidence            3589999999999999 9999999999998876

>d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]

Probab=98.61  E-value=2.6e-08  Score=74.56  Aligned_cols=67  Identities=18%  Similarity=0.249  Sum_probs=54.4

Q ss_pred             hhhhhHHHHhhhhc-CCCCCCcccHHHHHHHHHH-----hccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          301 RASLTETDAFAFLK-ADNDGDYITYSGFCEALEQ-----LNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       301 ~~~~~l~~~F~~~D-~~~~~G~i~~~el~~~l~~-----~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .....+..+|+.+. ++|+.+.|+..||+.+|+.     ++     ..-+++.++++|+.+|.|+||.|+|+||+.++
T Consensus         6 ~ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~-----~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~li   78 (95)
T d1qlsa_           6 RCIESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQ-----NQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLI   78 (95)
T ss_dssp             HHHHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHH-----HCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCcCCCcCcCCHHHHHHHHHHHHHHHhc-----CCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHH
Confidence            45567788898774 4666367999999999976     44     34567889999999999999999999999655

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

Probab=98.61  E-value=7.7e-10  Score=95.50  Aligned_cols=104  Identities=16%  Similarity=0.130  Sum_probs=74.1

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCC---CCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh----ccC
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTG---HKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW----KTT  376 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~---~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~----~~~  376 (447)
                      ..++++|+.+| +++ |.|+..||+.+|..+|...   ....++.+.++.|+..+|.|++|.|+|+||..++-    -+.
T Consensus        20 ~~~r~~F~~~d-~~d-G~Is~~EL~~~L~~~~~~~~~~~~~~~s~e~~~~li~~~D~d~~G~i~~~EF~~l~~~~~~~~~   97 (188)
T d1qxpa2          20 DNFKTLFSKLA-GDD-MEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRIRNYLT   97 (188)
T ss_dssp             -------CCCC-CSS-SSCCCSCTTTTTCC---------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHc-CCC-CEECHHHHHHHHHHhCccccccccccCCHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhHHHHH
Confidence            45889999999 558 9999999999987665110   11336778999999999999999999999985441    144


Q ss_pred             cccccccCCCcccccccccccccccceEEeccc
Q 013259          377 WSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAV  409 (447)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  409 (447)
                      .|...|.+.+|.++..|.......+|+.++...
T Consensus        98 ~F~~~D~d~sG~i~~~El~~~l~~~g~~~~~~~  130 (188)
T d1qxpa2          98 IFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQL  130 (188)
T ss_dssp             HHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHH
T ss_pred             HHHHhCCCCCCEECHHHHHHHHHHhhhcCCHHH
Confidence            678899999999999999888889998866543

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

Probab=98.57  E-value=1.9e-08  Score=93.84  Aligned_cols=65  Identities=18%  Similarity=0.251  Sum_probs=58.7

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCC-CCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKH-GLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~-~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ...+..+|..+|.|++ |+|+..||+.+|..+|     . .++++++..+|..+|.|+||.|+|+||+.+|+
T Consensus       252 ~~~~~~~F~~~D~d~~-G~Is~~E~~~~l~~~~-----~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~ml  317 (321)
T d1ij5a_         252 LLVLRILYAFADFDKS-GQLSKEEVQKVLEDAH-----IPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVL  317 (321)
T ss_dssp             HHHHHHHHHHTCSSSC-SSEEHHHHHHHHHHTT-----CCGGGCSTHHHHHHHHTTTTCSEECHHHHHHHHH
T ss_pred             hhHHHHHHHHHhcCCC-CCCcHHHHHHHHHHcC-----CCcCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            3456778999999999 9999999999999998     5 47788999999999999999999999998774

>d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100p [TaxId: 9606]

Probab=98.57  E-value=5.4e-08  Score=72.69  Aligned_cols=70  Identities=20%  Similarity=0.291  Sum_probs=51.1

Q ss_pred             hhhhhHHHHhhhhc-CCCCCCcccHHHHHHHHHH-hc-cCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          301 RASLTETDAFAFLK-ADNDGDYITYSGFCEALEQ-LN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       301 ~~~~~l~~~F~~~D-~~~~~G~i~~~el~~~l~~-~g-~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .....+..+|+.+. ++|+.+.++.+||+++|+. ++ +.  ....+++.++++|+.+|.|+||.|+|+||+..+
T Consensus         6 ~ai~~ii~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~l--~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li   78 (94)
T d1j55a_           6 TAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFL--QSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFV   78 (94)
T ss_dssp             HHHHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC--------CHHHHHHHHHCSSSSSSEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcccCCCcccCCHHHHHHHHHHHHHHHh--cCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHH
Confidence            45567788898874 4555358999999999986 22 00  023446679999999999999999999999665

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.57  E-value=6.3e-08  Score=83.39  Aligned_cols=74  Identities=16%  Similarity=0.275  Sum_probs=58.4

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhcc-CCC------CCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNL-TGH------KHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~-~~~------~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ......++.+|+.+|.|++ |+|+.+|+..+++.+.- .+.      .....++.++.+|+.+|.|+||.|+|+||.+.+
T Consensus        95 ~~~~e~~~~~F~~~D~d~d-G~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG~Is~~EF~~~~  173 (190)
T d1fpwa_          95 GTLEEKLSWAFELYDLNHD-GYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGS  173 (190)
T ss_dssp             CCSTHHHHHHHHHHCSSCS-SEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHHHH
T ss_pred             CchHHHHHHHHHHhccCCC-CcCcHHHHHHHHHHHHHhcccccCCCchhhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            3456788999999999999 99999999999987530 000      011225678999999999999999999999776


Q ss_pred             hc
Q 013259          373 WK  374 (447)
Q Consensus       373 ~~  374 (447)
                      ..
T Consensus       174 ~~  175 (190)
T d1fpwa_         174 KV  175 (190)
T ss_dssp             HS
T ss_pred             HH
Confidence            44

>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Recoverin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.56  E-value=9.7e-08  Score=82.91  Aligned_cols=69  Identities=13%  Similarity=0.210  Sum_probs=57.1

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCC--------------CHHHHHHHHHHcCCCCCceeeh
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGL--------------ADEETKDLWVQADIDGNGVVDY  365 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~--------------~~~~~~~~~~~~D~~~~g~i~~  365 (447)
                      ......++.+|+.+|.|++ |+|+.+|+..++..+.     ...              .++.++.+|..+|.|+||+|+|
T Consensus        95 ~~~~~~l~~~F~~~D~d~~-G~is~~E~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~  168 (201)
T d1omra_          95 GKTNQKLEWAFSLYDVDGN-GTISKNEVLEIVTAIF-----KMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTE  168 (201)
T ss_dssp             SCGGGSHHHHHHHHCTTCS-SSBCHHHHHHHHHHHH-----TTSCHHHHTTSCGGGSSHHHHHHHHHHHTTCCTTCCBCH
T ss_pred             cchHHHHHHHHHHHccCCC-CccCHHHHHHHHHHHH-----hhcChhhhhhhhhhhccHHHHHHHHHHHhCCCCCCCCcH
Confidence            3455678999999999999 9999999999998764     211              2345788999999999999999


Q ss_pred             HHHHHHHhc
Q 013259          366 KEFQQRIWK  374 (447)
Q Consensus       366 ~EF~~~~~~  374 (447)
                      +||++.+..
T Consensus       169 ~EF~~~~~~  177 (201)
T d1omra_         169 KEFIEGTLA  177 (201)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999987743

>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Sorcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=9.4e-08  Score=80.85  Aligned_cols=78  Identities=13%  Similarity=0.148  Sum_probs=64.6

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc----cCccc
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK----TTWSD  379 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~----~~~~~  379 (447)
                      ..+..+|+.+|.|++ |+|+.+||+.+|..+|     ..+++++++.+++.+|.  +|.|+|+||+..|..    ...+.
T Consensus        77 ~~~~~~f~~~D~d~s-G~i~~~El~~~l~~~g-----~~ls~~~~~~l~~~~d~--~g~i~~~eF~~~~~~~~~~~~~f~  148 (172)
T d1juoa_          77 NGWRQHFISFDTDRS-GTVDPQELQKALTTMG-----FRLSPQAVNSIAKRYST--NGKITFDDYIACCVKLRALTDSFR  148 (172)
T ss_dssp             HHHHHHHHTTCTTCC-SEECHHHHHHHHHHTT-----CCCCHHHHHHHHHHTCS--SSSEEHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhHHHHHhCcCCC-CcCCHHHHHHHHHHHH-----HhhhHHHHHHHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHH
Confidence            456778999999999 9999999999999999     88999999999999965  578999999977643    23345


Q ss_pred             ccccCCCccc
Q 013259          380 QRNDLNDEDE  389 (447)
Q Consensus       380 ~~~~~~~~~~  389 (447)
                      ..|.+..|.+
T Consensus       149 ~~D~d~~G~I  158 (172)
T d1juoa_         149 RRDTAQQGVV  158 (172)
T ss_dssp             HTCTTCCSEE
T ss_pred             HhCCCCCCcE
Confidence            5666666655

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Guanylate cyclase activating protein 2, GCAP-2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.48  E-value=1.2e-07  Score=81.43  Aligned_cols=74  Identities=14%  Similarity=0.222  Sum_probs=56.3

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhc-----cCC------CCC-CCCHHHHHHHHHHcCCCCCceeehHH
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLN-----LTG------HKH-GLADEETKDLWVQADIDGNGVVDYKE  367 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g-----~~~------~~~-~~~~~~~~~~~~~~D~~~~g~i~~~E  367 (447)
                      ......++.+|+.+|.|++ |+|+..|+..++..+.     ...      ... ...++.++.+|+.+|.|+||+|+|+|
T Consensus        90 ~~~~~~~~~~F~~~D~d~~-g~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~if~~~D~d~dG~Is~~E  168 (189)
T d1jbaa_          90 GTLEHKLKWTFKIYDKDRN-GCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNE  168 (189)
T ss_dssp             CCCTHHHHHHHHHHCSSCS-SCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHH
T ss_pred             cchHHHHHHHHhhhccCCC-CcccHhHHHHHHHHHHHhhccccccchhhhhccccchHHHHHHHHHHhCCCCCCcEeHHH
Confidence            3455678889999999999 9999999999876531     000      001 12245678999999999999999999


Q ss_pred             HHHHHhc
Q 013259          368 FQQRIWK  374 (447)
Q Consensus       368 F~~~~~~  374 (447)
                      |++++..
T Consensus       169 F~~~~~~  175 (189)
T d1jbaa_         169 FVEGARR  175 (189)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHHh
Confidence            9987754

>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin B-like protein 2
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.47  E-value=1.5e-07  Score=80.33  Aligned_cols=67  Identities=13%  Similarity=0.214  Sum_probs=55.6

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh----ccCCCCCCCCHHH----HHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL----NLTGHKHGLADEE----TKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~----g~~~~~~~~~~~~----~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ....++.+|+.+|.|++ |+|+.+|++.++..+    |     ..+++.+    ++.+|+.+|.|+||.|+|+||.+.+.
T Consensus        89 ~~~~~~~~F~~~D~d~~-G~Is~~e~~~~~~~~~~~~~-----~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~  162 (183)
T d2zfda1          89 IDDKIHFSFQLYDLKQQ-GFIERQEVKQMVVATLAESG-----MNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVL  162 (183)
T ss_dssp             HHHHHHHHHHHHCTTSS-SSEEHHHHHHHHHHHHHHTT-----CCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHH
T ss_pred             HHHHHHHhhcccccCCC-CCccHHHHHHHHHHHHhhhh-----cccchHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence            34568889999999999 999999999987653    4     5566655    55678999999999999999998775


Q ss_pred             c
Q 013259          374 K  374 (447)
Q Consensus       374 ~  374 (447)
                      .
T Consensus       163 ~  163 (183)
T d2zfda1         163 R  163 (183)
T ss_dssp             H
T ss_pred             H
Confidence            4

>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin regulatory subunit (B-chain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=5e-08  Score=81.99  Aligned_cols=66  Identities=23%  Similarity=0.393  Sum_probs=55.7

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh-ccCCCCCCCC----HHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL-NLTGHKHGLA----DEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~-g~~~~~~~~~----~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ....++.+|+.+|.|++ |+|+.+||+.+++.. |     ..++    ++.++.+|..+|.|+||+|+|+||+++|.
T Consensus        83 ~~~~~~~~f~~~d~d~~-g~Is~~el~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~D~~~dG~Is~~EF~~i~~  153 (165)
T d1auib_          83 KEQKLRFAFRIYDMDKD-GYISNGELFQVLKMMVG-----NNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVG  153 (165)
T ss_dssp             HHHHHHHHHHHHCTTCS-SEECHHHHHHHHHHHHT-----TSSCHHHHHHHHHHHHHHHCTTSSSSEEHHHHHHHHG
T ss_pred             hHHHHHHHHHHhccccc-ccccHHHHHHHHHHhcc-----ccCchHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHHh
Confidence            44568899999999999 999999999999764 4     4444    45578899999999999999999997664

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Guanylate cyclase activating protein 2, GCAP-2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.43  E-value=1.3e-07  Score=81.14  Aligned_cols=86  Identities=8%  Similarity=0.051  Sum_probs=67.0

Q ss_pred             hhhhHHHHhhhhcCCC-CCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhcc-----
Q 013259          302 ASLTETDAFAFLKADN-DGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWKT-----  375 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~-~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~-----  375 (447)
                      ...+|+++|+.|+.+. + |+|+.+||+.+|...|     ...+...++.+|..+|.|+||.|+|.||+..+...     
T Consensus        19 ~~~ei~~~~~~F~~~~~~-G~i~~~Ef~~~l~~~~-----~~~~~~~~~~lf~~~D~d~dG~I~f~Ef~~~l~~~~~~~~   92 (189)
T d1jbaa_          19 DAAQLQEWYKKFLEECPS-GTLFMHEFKRFFKVPD-----NEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTL   92 (189)
T ss_dssp             HHHHHHHHHHHHHSSSTT-CCEEHHHHHHHHHCCS-----SSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCC
T ss_pred             CHHHHHHHHHHhcccCCC-CeeeHHHHHHHHHHcC-----CCccHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccch
Confidence            3457888899888764 7 9999999999999888     77889999999999999999999999999766331     


Q ss_pred             -----CcccccccCCCccccccc
Q 013259          376 -----TWSDQRNDLNDEDEDGFV  393 (447)
Q Consensus       376 -----~~~~~~~~~~~~~~~~~~  393 (447)
                           .++...|.+..|.+...|
T Consensus        93 ~~~~~~~F~~~D~d~~g~i~~~E  115 (189)
T d1jbaa_          93 EHKLKWTFKIYDKDRNGCIDRQE  115 (189)
T ss_dssp             THHHHHHHHHHCSSCSSCBCHHH
T ss_pred             HHHHHHHHhhhccCCCCcccHhH
Confidence                 122344555556555444

>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Recoverin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.37  E-value=4.3e-08  Score=85.22  Aligned_cols=88  Identities=10%  Similarity=0.040  Sum_probs=61.2

Q ss_pred             hhhhHHHHhhhh-cCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc------
Q 013259          302 ASLTETDAFAFL-KADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK------  374 (447)
Q Consensus       302 ~~~~l~~~F~~~-D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~------  374 (447)
                      ...++..+|+.| +.+++ |.|+.+||+.+|..++.    ...+...++.++..+|.|++|.|+|.||+..+..      
T Consensus        23 ~~~ei~~l~~~F~~~~~~-G~is~~EF~~~l~~~~~----~~~~~~~~~~if~~~D~~~~G~I~f~EF~~~~~~~~~~~~   97 (201)
T d1omra_          23 TEEELSSWYQSFLKECPS-GRITRQEFQTIYSKFFP----EADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKT   97 (201)
T ss_dssp             CHHHHHHHHHHHHHHCTT-SEEEHHHHHHHHHHHCT----TSCCHHHHHHHHHTTTSCSSSEEEHHHHHHHHHHHHSSCG
T ss_pred             CHHHHHHHHHHHHHHCcC-CCccHHHHHHHHHHhcC----CCCHHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccch
Confidence            344555555544 56788 99999999999998871    2345566789999999999999999999966632      


Q ss_pred             ----cCcccccccCCCcccccccc
Q 013259          375 ----TTWSDQRNDLNDEDEDGFVK  394 (447)
Q Consensus       375 ----~~~~~~~~~~~~~~~~~~~~  394 (447)
                          ..++...|.+..|.+...|.
T Consensus        98 ~~~l~~~F~~~D~d~~G~is~~E~  121 (201)
T d1omra_          98 NQKLEWAFSLYDVDGNGTISKNEV  121 (201)
T ss_dssp             GGSHHHHHHHHCTTCSSSBCHHHH
T ss_pred             HHHHHHHHHHHccCCCCccCHHHH
Confidence                12223345556666655553

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

Probab=98.36  E-value=5.1e-08  Score=90.86  Aligned_cols=65  Identities=12%  Similarity=0.201  Sum_probs=59.7

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ....++++|..+|.|++ |.|+..||+.+|..+|     ..+++++++.++..+|.|++|.|+|.||+..+
T Consensus       120 ~~~~~~~~F~~~D~~~~-g~i~~~e~~~~l~~~~-----~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~  184 (321)
T d1ij5a_         120 DTNILRQLFLSSAVSGS-GKFSFQDLKQVLAKYA-----DTIPEGPLKKLFVMVENDTKGRMSYITLVAVA  184 (321)
T ss_dssp             HHHHHHHHHTSSSSTTS-SCCCHHHHHHHHHHHH-----TTSCSSHHHHHHHHHHHCCSSTHHHHHHTTSH
T ss_pred             HHHHHHHHHHHHcCCCC-CeEcHHHHHHHHHHcC-----CcccHHHHHHHHHHHhhcCCccccchhhhhhh
Confidence            34568899999999999 9999999999999999     88999999999999999999999999998543

>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin regulatory subunit (B-chain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.35  E-value=1.1e-07  Score=79.85  Aligned_cols=65  Identities=25%  Similarity=0.280  Sum_probs=53.8

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHhc
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~~  374 (447)
                      ......|+++|..+|+|++ |+|+.+||+.++....     .    +.+++++..+|.+++|.|+|+||+..+..
T Consensus        12 ~eei~~l~~~F~~~D~d~~-G~I~~~E~~~~~~~~~-----~----~~~~~l~~~~d~~~~g~i~~~EFl~~~~~   76 (165)
T d1auib_          12 ADEIKRLGKRFKKLDLDNS-GSLSVEEFMSLPELQQ-----N----PLVQRVIDIFDTDGNGEVDFKEFIEGVSQ   76 (165)
T ss_dssp             HHHHHHHHHHHHHHCTTCC-SEECHHHHTTSHHHHT-----C----TTHHHHHHHHCTTCSSSEEHHHHHHHHGG
T ss_pred             HHHHHHHHHHHHHHCCCCC-CCCcHHHHHHhhhccC-----C----HHHHHHHHHHccccchhhhhhhhhhhccc
Confidence            3456788999999999999 9999999998766543     2    23678999999999999999999976643

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Kchip1, Kv4 potassium channel-interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.35  E-value=5.9e-07  Score=76.13  Aligned_cols=73  Identities=15%  Similarity=0.302  Sum_probs=55.0

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhc-cCCC------CCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLN-LTGH------KHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g-~~~~------~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      .....++.+|+.+|.|++ |+|+.+|+..++..+. ..+.      .....++.++.+|+.+|.|+||.|+|+||.+.+.
T Consensus        84 ~~~~~~~~~f~~~D~~~~-g~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~DG~Is~~EF~~~i~  162 (178)
T d1s6ca_          84 TVHEKLRWTFNLYDINKD-GYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQ  162 (178)
T ss_dssp             CHHHHHHHHHHHHCTTCS-SCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHHHHTT
T ss_pred             chHHHHHHHHHhhccCCC-CeecHHHHHHHHHHHHhhcccccccCCcHHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence            445678889999999999 9999999998876531 0000      0123356678999999999999999999997665


Q ss_pred             c
Q 013259          374 K  374 (447)
Q Consensus       374 ~  374 (447)
                      .
T Consensus       163 ~  163 (178)
T d1s6ca_         163 E  163 (178)
T ss_dssp             S
T ss_pred             H
Confidence            4

>d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]

Probab=98.33  E-value=6.9e-07  Score=64.81  Aligned_cols=71  Identities=14%  Similarity=0.195  Sum_probs=52.8

Q ss_pred             HhhhhhHHHHhhhhcC-CCCCCcccHHHHHHHHHH-hccCCCCCC--CCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          300 RRASLTETDAFAFLKA-DNDGDYITYSGFCEALEQ-LNLTGHKHG--LADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~-~~~~G~i~~~el~~~l~~-~g~~~~~~~--~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ......+..+|+.+-. +|+.+.++..||+++|++ ++  +-...  -.+..++++|+.+|.|+||.|+|+||+.++
T Consensus         6 E~ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~--~~l~~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li   80 (83)
T d1xk4c1           6 ERNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQ--NFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLM   80 (83)
T ss_dssp             HHHHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTT--TTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCcCCCcccCCHHHHHHHHHHHhH--HHhcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHH
Confidence            3455677888988863 444368999999999986 33  00011  245668999999999999999999999655

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.29  E-value=7.4e-07  Score=76.44  Aligned_cols=63  Identities=17%  Similarity=0.364  Sum_probs=57.6

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ..+..+|..+|.+++ |.|+..||..++..++     ....++.++.+++.+|.|++|.|+++||...+
T Consensus        63 ~~~~~if~~~D~~~~-G~I~~~Ef~~~~~~~~-----~~~~~e~~~~~F~~~D~d~dG~is~~E~~~~~  125 (190)
T d1fpwa_          63 DFANHLFTVFDKDNN-GFIHFEEFITVLSTTS-----RGTLEEKLSWAFELYDLNHDGYITFDEMLTIV  125 (190)
T ss_dssp             HHHHHHHHTCCSSCS-SEECHHHHHHHHHHHS-----CCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHH
T ss_pred             HHHHHHHHHhCcCCC-CcccHHHHHHHHHHHc-----cCchHHHHHHHHHHhccCCCCcCcHHHHHHHH
Confidence            345789999999999 9999999999999987     66888999999999999999999999998766

>d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.28  E-value=3.6e-07  Score=50.95  Aligned_cols=32  Identities=22%  Similarity=0.340  Sum_probs=28.9

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhc
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLN  335 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g  335 (447)
                      .++|.++|+.||+|.| |+|+.+||..+|+.-|
T Consensus         3 EeELae~FRifDkNaD-GyiD~eEl~~ilr~tG   34 (34)
T d1ctda_           3 EEELANAFRIFDKNAD-GYIDIEELGEILRATG   34 (34)
T ss_dssp             HHHHHHHHHTTCCSSS-SCBCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHccCCc-ccccHHHHHHHHHhcC
Confidence            4688999999999999 9999999999998644

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Kchip1, Kv4 potassium channel-interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.15  E-value=1.2e-06  Score=74.05  Aligned_cols=65  Identities=12%  Similarity=0.105  Sum_probs=52.1

Q ss_pred             hhhhHHHHhhhh-cCCCCCCcccHHHHHHHHHHhccCCCCCCC-CHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          302 ASLTETDAFAFL-KADNDGDYITYSGFCEALEQLNLTGHKHGL-ADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       302 ~~~~l~~~F~~~-D~~~~~G~i~~~el~~~l~~~g~~~~~~~~-~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ...+++.+|+.| +.+++ |.|+.+||+.+|..++     ... +...++.++..+|.|++|.|+|+||+..+
T Consensus        11 t~~ei~~l~~~F~~~~~~-G~is~~ef~~~l~~~~-----~~~~~~~~~~~lf~~~D~~~~g~I~~~EFl~~~   77 (178)
T d1s6ca_          11 TKRELQVLYRGFKNECPS-GVVNEETFKQIYAQFF-----PHGDASTYAHYLFNAFDTTQTGSVKFEDFVTAL   77 (178)
T ss_dssp             CHHHHHHHHHHHHHHCTT-SEECHHHHHHHHHHHS-----TTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHCcC-CCccHHHHHHHHHHhC-----CCCCHHHHHHHHHHHHCCCCCCcccHHHHHHHH
Confidence            345666666665 56788 9999999999999887     433 45556899999999999999999998666

>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin B-like protein 2
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.14  E-value=1.2e-06  Score=74.66  Aligned_cols=66  Identities=18%  Similarity=0.225  Sum_probs=52.0

Q ss_pred             HhhhhhHHHHhhhhcCC--CCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          300 RRASLTETDAFAFLKAD--NDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~--~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .+....|.+.|..+|.+  ++ |+|+.+||+.++...+     ...+ ..++.++..+|.|+||.|+|.||+..+
T Consensus        13 ~~ei~~L~~~F~~~d~~~~~~-G~i~~~ef~~~l~~~~-----~~~~-~~~~~lf~~~d~~~dg~I~f~EFl~~l   80 (183)
T d2zfda1          13 VSEIEALYELFKKISSAVIDD-GLINKEEFQLALFKTN-----KKES-LFADRVFDLFDTKHNGILGFEEFARAL   80 (183)
T ss_dssp             HHHHHHHHHHHHHHHTSSSCS-SSBCHHHHHHHHHSCS-----SCCC-HHHHHHHHHHCSSCSSSBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCcCCCCC-CcCcHHHHHHHHHhcC-----CCCC-HHHHHHHHHHccCCCCcCcHHHHHHHH
Confidence            45666788888888875  57 8999999998887766     3333 457889999999999999999998765

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

Probab=98.13  E-value=2.1e-07  Score=78.51  Aligned_cols=121  Identities=12%  Similarity=0.119  Sum_probs=69.6

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCH-HH----HHHHHHH--cCCCCCceeehHHHHHHHhc-
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLAD-EE----TKDLWVQ--ADIDGNGVVDYKEFQQRIWK-  374 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~-~~----~~~~~~~--~D~~~~g~i~~~EF~~~~~~-  374 (447)
                      .+.++.+|+.+|.|++ |+|+.+||..++..++-... ..... ..    ...++..  .+.+++|.|+++||+..+.. 
T Consensus         5 ~~~l~~~F~~~D~d~d-G~Is~~Ef~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~   82 (174)
T d2scpa_           5 VQKMKTYFNRIDFDKD-GAITRMDFESMAERFAKESE-MKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKEM   82 (174)
T ss_dssp             HHHHHHHHHHHCTTCS-SEECHHHHHHHHHHHHHHSC-CCTTHHHHHHHHHHHHHHHTGGGTTTTSCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHccCCC-CcEeHHHHHHHHHHHhcccc-chhHHHHHhHHhhhhhccccccccCCCCcCcHHHHHHHHHhh
Confidence            4678999999999999 99999999999876531000 11111 11    1112221  26677788888888865532 


Q ss_pred             --------------cCcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCcceeE
Q 013259          375 --------------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLTV  434 (447)
Q Consensus       375 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  434 (447)
                                    ...+...|.+..|.++..|.......+|..       ..++..  .-..+|.+.+|.|+.
T Consensus        83 ~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~-------~~~~~~--~f~~~D~d~dG~Is~  147 (174)
T d2scpa_          83 VKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGLD-------KTMAPA--SFDAIDTNNDGLLSL  147 (174)
T ss_dssp             TSCGGGTHHHHTHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCC-------GGGHHH--HHHHHCTTCSSEECH
T ss_pred             hcchhhHHHHHHHHHHHHHHHCCCccccCCHHHHHHHHHHHhhh-------hHHHHH--HHhhcCCCCCCcEeH
Confidence                          112344555666666665544333333321       111222  234667778887763

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=98.01  E-value=5.4e-07  Score=76.58  Aligned_cols=121  Identities=17%  Similarity=0.142  Sum_probs=76.3

Q ss_pred             hhhhHHHHhhh-hcCCCCCCcccHHHHHHHHHHhccCCCCCCCCH-----------HHHHHHHHHcCCCCCceeehHHHH
Q 013259          302 ASLTETDAFAF-LKADNDGDYITYSGFCEALEQLNLTGHKHGLAD-----------EETKDLWVQADIDGNGVVDYKEFQ  369 (447)
Q Consensus       302 ~~~~l~~~F~~-~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~-----------~~~~~~~~~~D~~~~g~i~~~EF~  369 (447)
                      +...++.+|.. +|.|++ |+|+.+||..+|..++.... .....           .....+....|.+++|.|+++||.
T Consensus         6 q~~~i~~~F~~~~D~d~d-G~Is~~Ef~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~i~~~~~~   83 (185)
T d2sasa_           6 QKQKIKFTFDFFLDMNHD-GSIQDNDFEDMMTRYKEVNK-GSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYL   83 (185)
T ss_dssp             HHHHHHHHHHHHTCTTCS-SEECHHHHHHHHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHH
T ss_pred             HHHHHHHHHHHhhcCCCC-CcCCHHHHHHHHHHhccccC-CCcccHHHHHHHHHHHHHHHHHHHHhCcCCCCcEeeeHhh
Confidence            34568999986 699999 99999999999987531000 11111           112455677899999999999998


Q ss_pred             HHHhc-------------------cCcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCc
Q 013259          370 QRIWK-------------------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHA  430 (447)
Q Consensus       370 ~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  430 (447)
                      ..+..                   ...+...|.+..|.+...|...-...+|+.       ..++..  .-..+|.+.+|
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~l~-------~~~~~~--~f~~~D~d~dG  154 (185)
T d2sasa_          84 AMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQLQ-------CADVPA--VYNVITDGGKV  154 (185)
T ss_dssp             HHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCCC-------CSSHHH--HHHHHHTTTTS
T ss_pred             HHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHccCCCccCCHHHHHHHHHHcCCC-------HHHHHH--HHHHcCCCCCC
Confidence            65522                   122345566666777766655444444431       122222  22457778888


Q ss_pred             cee
Q 013259          431 RLT  433 (447)
Q Consensus       431 ~l~  433 (447)
                      .|+
T Consensus       155 ~i~  157 (185)
T d2sasa_         155 TFD  157 (185)
T ss_dssp             CCS
T ss_pred             CCc
Confidence            876

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=97.94  E-value=9.9e-07  Score=74.06  Aligned_cols=120  Identities=11%  Similarity=0.065  Sum_probs=76.9

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHH-----------HHHHHHcCCCCCceeehHHHHHH
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEET-----------KDLWVQADIDGNGVVDYKEFQQR  371 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~-----------~~~~~~~D~~~~g~i~~~EF~~~  371 (447)
                      .+.|+++|+.+|.|++ |.|+.+||+.++..++.... ......++           ..++...|.+++|.|++.+++..
T Consensus         6 ~~~l~~~F~~~D~d~d-G~Is~~Ef~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~   83 (176)
T d1nyaa_           6 SDRLKKRFDRWDFDGN-GALERADFEKEAQHIAEAFG-KDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRV   83 (176)
T ss_dssp             HHHHHHHHHHCCSSCC-SSBCSHHHHHHHHHHHHHTS-SCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCC-CcCcHHHHHHHHHHHHHHcC-CcccHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccHHHHHHH
Confidence            4578999999999999 99999999999977531000 22222222           44566778889999999999865


Q ss_pred             Hhc------------------cCcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCccee
Q 013259          372 IWK------------------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHARLT  433 (447)
Q Consensus       372 ~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (447)
                      +..                  ...+...|.+..|.+..+|.......+|+       .+.++..  .-+.+|.+.+|.|+
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~~~~~~~-------~~~~~~~--~f~~~D~d~dG~i~  154 (176)
T d1nyaa_          84 TENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALGM-------SKAEAAE--AFNQVDTNGNGELS  154 (176)
T ss_dssp             HHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTTC-------CHHHHHH--HHHHHCTTCSSEEE
T ss_pred             HhhhhhhhhhhhhHHHHHHHHHHHHHHHccCCChhhhHHHHHHHHHhcCC-------cHHHHHH--HHHHHCCCCCCcEe
Confidence            522                  11223445666777776665544444442       1222222  34568888888876

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.89  E-value=1e-05  Score=68.85  Aligned_cols=61  Identities=25%  Similarity=0.389  Sum_probs=50.7

Q ss_pred             HHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          306 ETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       306 l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ...+|..+|.+++ |.|+..||..++..+.     ....++.++.+++.+|.|+||.|+.+||...+
T Consensus        62 ~~~if~~~d~~~d-g~I~~~EF~~~l~~~~-----~~~~~e~l~~~F~~~D~d~dG~i~~~El~~~~  122 (187)
T d1g8ia_          62 ATFVFNVFDENKD-GRIEFSEFIQALSVTS-----RGTLDEKLRWAFKLYDLDNDGYITRNEMLDIV  122 (187)
T ss_dssp             HHHHHHHHCTTCS-SEEEHHHHHHHHHHHH-----HCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHH
T ss_pred             HHHHHHHhCcCCC-CCCcHHHHHHHHHHhc-----cCchhhhHHHHHHHHhcCCCCeEcHHHHHHHH
Confidence            4568999999999 9999999988887764     33567778889999999999999999988655

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]

Probab=97.88  E-value=1.8e-06  Score=73.64  Aligned_cols=119  Identities=11%  Similarity=0.074  Sum_probs=71.2

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHH-----HHhccCCCCCCCCHHHHHHH-----HHHcCCCCCceeehHHHHHH
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEAL-----EQLNLTGHKHGLADEETKDL-----WVQADIDGNGVVDYKEFQQR  371 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l-----~~~g~~~~~~~~~~~~~~~~-----~~~~D~~~~g~i~~~EF~~~  371 (447)
                      ..+.++++|..+|.|++ |+|+.+||..++     +.+|     ..++..++.++     ....+...++.|+++||+..
T Consensus        12 ~i~r~k~~F~~~D~d~d-G~I~~~E~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~~   85 (189)
T d1qv0a_          12 WIKRHKHMFDFLDINGN-GKITLDEIVSKASDDICAKLE-----ATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDG   85 (189)
T ss_dssp             HHHHHHHHHHHHCTTCS-SCBCHHHHHHHHHHTHHHHTT-----CCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCC-CcCcHHHHHHHHHHHHHHHcC-----CCchhHHHHHHHHHHHhhhccccCCCceehHHHHHH
Confidence            34578899999999999 999999998754     4456     44555554333     34445667778888888765


Q ss_pred             Hhc---------------------cCcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCc
Q 013259          372 IWK---------------------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHA  430 (447)
Q Consensus       372 ~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  430 (447)
                      +..                     ...+...|.+..|.++..|.......+|...+...     +..  +-..+|.+.+|
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~E~~~~l~~~g~~~~~~~-----~~~--lf~~~D~d~dG  158 (189)
T d1qv0a_          86 WKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQED-----CEA--TFRHCDLDNAG  158 (189)
T ss_dssp             HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHH-----HHH--HHHHSCCCTTS
T ss_pred             HHHHHHHhhhccccccHHHHHHHHHHHHHHHccCCCCcccchhhHHHHHhcCCCCCHHH-----HHH--HHHHhCCCCCC
Confidence            522                     01233445666666666665554555554333222     222  33467777888


Q ss_pred             cee
Q 013259          431 RLT  433 (447)
Q Consensus       431 ~l~  433 (447)
                      .|+
T Consensus       159 ~Is  161 (189)
T d1qv0a_         159 DLD  161 (189)
T ss_dssp             CEE
T ss_pred             cEe
Confidence            775

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

Probab=97.83  E-value=2.3e-06  Score=72.75  Aligned_cols=118  Identities=11%  Similarity=0.052  Sum_probs=70.3

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHH-----hccCCCCCCCCHHHHHHHHH-----HcCCCCCceeehHHHHHHH
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQ-----LNLTGHKHGLADEETKDLWV-----QADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~-----~g~~~~~~~~~~~~~~~~~~-----~~D~~~~g~i~~~EF~~~~  372 (447)
                      ...++++|..+|.|++ |+|+.+||..++..     +|     ..++..++...+.     ......++.+++.+|+..+
T Consensus        11 ~~~~k~~F~~~D~d~d-G~Is~~Ef~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (187)
T d1uhka1          11 IGRHKHMFNFLDVNHN-GKISLDEMVYKASDIVINNLG-----ATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGW   84 (187)
T ss_dssp             HHHHHHHHHHHCTTCC-SEEEHHHHHHHHHHHHHHTSC-----CCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCC-CcCcHHHHHHHHHHHHHHHhc-----cCccHHHHHHHHHHhhhhcccccccccccHHHHHHHH
Confidence            3577889999999999 99999999877654     34     3344444333333     3344555667777776544


Q ss_pred             hc---------------------cCcccccccCCCcccccccccccccccceEEeccccCCcccccCCCCCCCCCCCCcc
Q 013259          373 WK---------------------TTWSDQRNDLNDEDEDGFVKSSLEQTIGFSVKNAVLFPPEVEKGRWPENYSLSDHAR  431 (447)
Q Consensus       373 ~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  431 (447)
                      ..                     ..++...|.+..|.+...|.......+|...+...     +..  .-..+|.+.+|.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~-----~~~--lf~~~D~d~dG~  157 (187)
T d1uhka1          85 KKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSED-----CEE--TFRVCDIDESGQ  157 (187)
T ss_dssp             HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHH-----HHH--HHHHSCCCTTSC
T ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHHHHHccCCCcccchHHHHHHHHHhCCCccHHH-----HHH--HHHHhCCCCCCC
Confidence            21                     11223446666666666665555555554333222     222  334567777777


Q ss_pred             ee
Q 013259          432 LT  433 (447)
Q Consensus       432 l~  433 (447)
                      |+
T Consensus       158 Is  159 (187)
T d1uhka1         158 LD  159 (187)
T ss_dssp             EE
T ss_pred             Ee
Confidence            65

>d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=1.8e-05  Score=66.12  Aligned_cols=71  Identities=11%  Similarity=0.091  Sum_probs=43.2

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCC-------CCCCCHHHHHHHHHHcCCCCC----ceeehHHHHHH
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGH-------KHGLADEETKDLWVQADIDGN----GVVDYKEFQQR  371 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~-------~~~~~~~~~~~~~~~~D~~~~----g~i~~~EF~~~  371 (447)
                      ..++..+|..+|.|++ |+||.+||+.+|....  +.       ...++.+.++.+|..+..+.+    |.|++++|+.+
T Consensus        77 r~ei~~~F~~~d~d~~-~~it~~el~~fL~~~Q--~~~~~~e~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ls~d~F~~f  153 (170)
T d2zkmx1          77 RPEIDEIFTSYHAKAK-PYMTKEHLTKFINQKQ--RDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPEGMVWF  153 (170)
T ss_dssp             CHHHHTTCC---------CCCHHHHHHHHHHTC--C---------------CHHHHHHHHCCC--------CCHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCC-CcccHHHHHHHHHHHh--cchhhhhhccccCCHHHHHHHHHHHccccccccCCeECHHHHHHH
Confidence            4578899999999999 9999999999998753  00       023577889999999987754    88999999988


Q ss_pred             HhccC
Q 013259          372 IWKTT  376 (447)
Q Consensus       372 ~~~~~  376 (447)
                      |+.+.
T Consensus       154 L~S~e  158 (170)
T d2zkmx1         154 LCGPE  158 (170)
T ss_dssp             HHSTT
T ss_pred             HcCcc
Confidence            87643

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.57  E-value=6e-05  Score=63.35  Aligned_cols=59  Identities=25%  Similarity=0.383  Sum_probs=29.2

Q ss_pred             HHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHH
Q 013259          307 TDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQR  371 (447)
Q Consensus       307 ~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~  371 (447)
                      .++|..+|.+++ |.|+..||..++..+-     ....++.++.+++.+|.|++|.|+.+||...
T Consensus        62 ~~lf~~~d~~~~-g~i~~~eFl~~~~~~~-----~~~~~~~~~~~f~~~D~d~dg~i~~~E~~~~  120 (181)
T d1bjfa_          62 EHVFRTFDANGD-GTIDFREFIIALSVTS-----RGKLEQKLKWAFSMYDLDGNGYISKAEMLEI  120 (181)
T ss_dssp             HHHHHHHCSSCS-SEEEHHHHHHHHHHHT-----SSCHHHHHHHHHHHHCTTCSSCEEHHHHHHH
T ss_pred             HHHHHhcCCCCC-CcEeHHHHHHHHHHHh-----hhchHHHHHHHHHHhccCCCCeecHHHHHHH
Confidence            344555555555 5555555555544432     2233444555555555555555555555433

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.55  E-value=5.9e-05  Score=63.50  Aligned_cols=63  Identities=11%  Similarity=0.260  Sum_probs=52.7

Q ss_pred             hHHHHhhhhcCC-CCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          305 TETDAFAFLKAD-NDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       305 ~l~~~F~~~D~~-~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      -..++|+.||.+ ++ |.|+..||..+|..+.-    ....++.++.+++.+|.|++|.|+.+|+...+
T Consensus        58 ~~~rif~~fd~~~~~-g~I~f~EFv~~l~~~~~----~~~~~~kl~~~F~~~D~d~~G~I~~~el~~~l  121 (180)
T d1xo5a_          58 FKERICRVFSTSPAK-DSLSFEDFLDLLSVFSD----TATPDIKSHYAFRIFDFDDDGTLNREDLSRLV  121 (180)
T ss_dssp             THHHHHHHHCCSTTC-CEECHHHHHHHHHHHST----TSCHHHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred             HHHHHHHhccCCCCC-CcCcHHHHHHHHHHHhh----cCCHHHHHHHhhccccCCCCCeeeHHHHHHHH
Confidence            456799999987 68 99999999999977630    23456789999999999999999999998665

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

Probab=97.50  E-value=7.1e-05  Score=57.33  Aligned_cols=59  Identities=19%  Similarity=0.327  Sum_probs=46.5

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .++.+++..+|  .+ |.|+..||..++..       ..-++++++++|+.+|.|++|.|+.+|+...|
T Consensus         9 ~di~~~~~~~~--~~-G~idf~eF~~~~~~-------~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l   67 (109)
T d5pala_           9 DDINKAISAFK--DP-GTFDYKRFFHLVGL-------KGKTDAQVKEVFEILDKDQSGFIEEEELKGVL   67 (109)
T ss_dssp             HHHHHHHHHTC--ST-TCCCHHHHHHHHTC-------TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHH
T ss_pred             HHHHHHHHhcC--CC-CcCcHHHHHHHHHh-------cCCCHHHHHHHHhhhcCCCCCeEcHHHHHHHH
Confidence            35566666664  67 89999999866532       33578899999999999999999999998655

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=97.46  E-value=6e-05  Score=57.76  Aligned_cols=59  Identities=12%  Similarity=0.241  Sum_probs=46.1

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      +++.+++..+  +++ |.|+..||..++..       ...++++++.+|+.+|.|++|.|+.+|+...+
T Consensus         9 eeI~~~~~~~--d~d-G~idf~EF~~~~~~-------~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l   67 (109)
T d1pvaa_           9 DDIKKALDAV--KAE-GSFNHKKFFALVGL-------KAMSANDVKKVFKAIDADASGFIEEEELKFVL   67 (109)
T ss_dssp             HHHHHHHHHT--CST-TCCCHHHHHHHHTC-------TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGG
T ss_pred             HHHHHHHHhc--CCC-CCCcHHHHHHHHHH-------ccCCHHHHHHHhhCccCCCcCeEcHHHHHHHH
Confidence            4555555544  577 99999999776543       23678899999999999999999999997544

>d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.35  E-value=4.1e-06  Score=70.23  Aligned_cols=63  Identities=6%  Similarity=-0.061  Sum_probs=46.6

Q ss_pred             HHHHhhh--hcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          306 ETDAFAF--LKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       306 l~~~F~~--~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      |+++|..  +|.|++ |.||.+||++++...+..   .....+.+..++...|.+++|.|+|+||...+
T Consensus         7 l~k~~~k~~~d~n~d-G~Is~~el~k~l~~~~~~---~~~~~~~~~~~~~~~D~~~~~~i~F~eF~~~~   71 (170)
T d2zkmx1           7 LDKILVKLKMQLNSE-GKIPVKNFFQMFPADRKR---VEAALSACHLPKGKNDAINPEDFPEPVYKSFL   71 (170)
T ss_dssp             HHHHHHHHHHSCCTT-SCEEHHHHHHHSCSCHHH---HHHHHHHTTCCCCTTCEECGGGCCHHHHHHHH
T ss_pred             HHHHHHHHhcccCCC-CCCcHHHHHHHHHHhhhh---HHHHHHHHhhhhccccccCCCccCHHHHHHHH
Confidence            4455544  799999 999999999998654300   11234466777888899999999999999655

>d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Diacylglycerol kinase alpha, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.30  E-value=0.00054  Score=52.90  Aligned_cols=67  Identities=15%  Similarity=0.072  Sum_probs=48.1

Q ss_pred             hhhhHHHHhhhhc---CCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCC--------ceeehHHHHH
Q 013259          302 ASLTETDAFAFLK---ADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGN--------GVVDYKEFQQ  370 (447)
Q Consensus       302 ~~~~l~~~F~~~D---~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~--------g~i~~~EF~~  370 (447)
                      ..+.+.+.|+...   .+.+ |.|+.++|+.++..+.-   ....+..-++.++..||.+++        |.|+|.||+.
T Consensus        26 ei~~l~~~Fk~~~~~~~~p~-g~i~~~~F~~~~~~~f~---~~~~~~~l~~rlF~~FD~~~d~~~~~~~~g~I~f~efv~  101 (118)
T d1tuza_          26 KVSDVLKLFEDGEMAKYVQG-DAIGYEGFQQFLKIYLE---VDNVPRHLSLALFQSFETGHCLNETNVTKDVVCLNDVSC  101 (118)
T ss_dssp             CHHHHHHHHHTSGGGGGEET-TEECHHHHHHHHHHHTT---CSSCCHHHHHHHHHHSCCCCCTTCCCCCSCCEEHHHHHH
T ss_pred             HHHHHHHHHhccccccCCcc-cccCHHHHHHHHHHhCC---CCCchHHHHHHHHHHHccccccccccCCCceeeHHHHHH
Confidence            3444444454221   2457 99999999999987630   012356788999999999976        8999999997


Q ss_pred             HH
Q 013259          371 RI  372 (447)
Q Consensus       371 ~~  372 (447)
                      +|
T Consensus       102 ~L  103 (118)
T d1tuza_         102 YF  103 (118)
T ss_dssp             HH
T ss_pred             HH
Confidence            66

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=97.29  E-value=0.00022  Score=54.45  Aligned_cols=60  Identities=13%  Similarity=0.201  Sum_probs=48.3

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ..++.+++..+  +.+ |.|+..||..++..-+       .++++++.+|+.+|.|++|.|+.+||...|
T Consensus         8 ~~~i~~~~~~~--~~~-~~i~f~eF~~~~~~~~-------~~~~~~~~~F~~~D~d~~G~I~~~El~~~l   67 (109)
T d1rwya_           8 AEDIKKAIGAF--TAA-DSFDHKKFFQMVGLKK-------KSADDVKKVFHILDKDKSGFIEEDELGSIL   67 (109)
T ss_dssp             HHHHHHHHHTT--CST-TCCCHHHHHHHHTGGG-------SCHHHHHHHHHHHSTTCSSEECHHHHHTHH
T ss_pred             HHHHHHHHHhc--ccC-CCcCHHHHHHHHcccc-------CCHHHHHHHhhcccCCCCCcCcHHHHHHHH
Confidence            34666777766  456 8899999988764433       578899999999999999999999998666

>d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=97.27  E-value=9.4e-05  Score=41.04  Aligned_cols=29  Identities=21%  Similarity=0.412  Sum_probs=26.0

Q ss_pred             CHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          344 ADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       344 ~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      +++++.+.|+.||+|.||.|+.+||...+
T Consensus         2 sEeELae~FRifDkNaDGyiD~eEl~~il   30 (34)
T d1ctda_           2 SEEELANAFRIFDKNADGYIDIEELGEIL   30 (34)
T ss_dssp             HHHHHHHHHHTTCCSSSSCBCHHHHHHHH
T ss_pred             CHHHHHHHHHHHccCCcccccHHHHHHHH
Confidence            47889999999999999999999998544

>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=97.23  E-value=0.00013  Score=42.13  Aligned_cols=29  Identities=28%  Similarity=0.523  Sum_probs=26.3

Q ss_pred             CHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          344 ADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       344 ~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      +++++++.|+.||+|+||.|+..|+...|
T Consensus         1 seeel~eAF~~FDkDg~G~Is~~EL~~vm   29 (33)
T d2hf5a1           1 SEEEIREAFRVFDKDGNGYISAAELRHVM   29 (33)
T ss_dssp             CHHHHHHHHHHHSSSCCSCBCHHHHHHHT
T ss_pred             CHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            57899999999999999999999998654

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=96.90  E-value=0.00047  Score=52.33  Aligned_cols=59  Identities=15%  Similarity=0.179  Sum_probs=46.5

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .++..++...|  .+ |.|+..||..++..-+       -+.++++.+|+.+|.|++|.|+.+||...+
T Consensus         8 ~di~~~~~~~~--~~-gsi~~~eF~~~~~l~~-------~~~~~l~~~F~~~D~d~~G~I~~~el~~~l   66 (107)
T d2pvba_           8 ADVAAALAACS--AA-DSFKHKEFFAKVGLAS-------KSLDDVKKAFYVIDQDKSGFIEEDELKLFL   66 (107)
T ss_dssp             HHHHHHHHHTC--ST-TCCCHHHHHHHHTGGG-------SCHHHHHHHHHHHCTTCSSSBCHHHHHTGG
T ss_pred             HHHHHHHHhcc--CC-CCcCHHHHHHHHhccc-------CCHHHHHHHHHhhccCCCCcCcHHHHHHHH
Confidence            34566666654  45 7799999987765433       578899999999999999999999998654

>d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Osteonectin
domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.80  E-value=0.00011  Score=58.71  Aligned_cols=54  Identities=17%  Similarity=0.282  Sum_probs=46.3

Q ss_pred             HhhhhcCC-CCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHH
Q 013259          309 AFAFLKAD-NDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQ  370 (447)
Q Consensus       309 ~F~~~D~~-~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~  370 (447)
                      .|..+|.| +| |+|+..||+.+...+       ...+..++..++.+|.|+||.|++.|+..
T Consensus        82 ~F~~LD~n~~D-~~L~~~EL~~l~~~L-------~~~e~C~~~F~~~CD~n~D~~Is~~EW~~  136 (151)
T d1sraa_          82 QFGQLDQHPID-GYLSHTELAPLRAPL-------IPMEHCTTRFFETCDLDNDKYIALDEWAG  136 (151)
T ss_dssp             HHHHHCCTTCS-SEECTTTTGGGGSTT-------STTGGGHHHHHHHHCTTCSSSEEHHHHHH
T ss_pred             ehhhcCCCCCC-CccCHHHHHHHHHhh-------cCCchHHHHHHHHhcCCCCCcCCHHHHHH
Confidence            49999999 58 999999999864333       25677899999999999999999999984

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.60  E-value=0.00092  Score=50.75  Aligned_cols=59  Identities=19%  Similarity=0.225  Sum_probs=43.9

Q ss_pred             hhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          304 LTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       304 ~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .++..+.+..  +.+ |.|+..+|...+   ++    ...+.++++++|+.+|.|++|.|+++||...+
T Consensus         9 ~dI~~~l~~~--~~~-~s~~~~~F~~~~---~~----~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l   67 (108)
T d1rroa_           9 EDIAAALQEC--QDP-DTFEPQKFFQTS---GL----SKMSASQVKDIFRFIDNDQSGYLDGDELKYFL   67 (108)
T ss_dssp             HHHHHHHHHT--CST-TCCCHHHHHHHH---SG----GGSCHHHHHHHHHHHCTTCSSEECTHHHHTGG
T ss_pred             HHHHHHHHhc--ccC-CCccHHHHHHHH---cc----CcCCHHHHHHHHhhhcCCCCCeEcHHHHHHHH
Confidence            3444454444  466 889888885544   32    23678899999999999999999999998555

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

Probab=96.25  E-value=0.0012  Score=46.63  Aligned_cols=34  Identities=18%  Similarity=0.170  Sum_probs=30.2

Q ss_pred             CCCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          340 KHGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       340 ~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      +..-++++++++|+.+|.|++|.|+.+||...|.
T Consensus         3 ge~d~~e~l~~~F~~~D~d~~G~I~~~el~~~l~   36 (77)
T d1oqpa_           3 GERDSREEILKAFRLFDDDNSGTITIKDLRRVAK   36 (77)
T ss_dssp             TTSSHHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred             CCccHHHHHHHHHHHHcCCCCCEechHHHHHHHH
Confidence            3667788999999999999999999999997763

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=96.02  E-value=0.0015  Score=44.40  Aligned_cols=29  Identities=28%  Similarity=0.523  Sum_probs=26.2

Q ss_pred             CHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          344 ADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       344 ~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ++++++++|+.+|.|++|.|+++||...+
T Consensus         1 Seeel~~aF~~fD~d~~G~I~~~el~~~l   29 (65)
T d1fw4a_           1 SEEEIREAFRVFDKDGNGYISAAELRHVM   29 (65)
T ss_dssp             CCHHHHHHHHHHCTTCSSEECHHHHHHHH
T ss_pred             CHHHHHHHHHHHcCCCCCcCCHHHHHHHH
Confidence            46889999999999999999999998655

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=95.57  E-value=0.0041  Score=41.55  Aligned_cols=28  Identities=14%  Similarity=0.179  Sum_probs=25.2

Q ss_pred             HHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          346 EETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       346 ~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      +++.+.|+.+|.+++|.|+.+||...|.
T Consensus         1 Eel~~aF~~fD~~~~G~I~~~el~~~l~   28 (61)
T d2fcea1           1 EDFVKAFQVFDKESTGKVSVGDLRYMLT   28 (61)
T ss_dssp             HHHHHHHHHHCTTCCSCEEHHHHHHHHH
T ss_pred             ChHHHHHHHHCCCCCCeEeHHHHHHHHH
Confidence            5788999999999999999999997763

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=95.49  E-value=0.0015  Score=47.41  Aligned_cols=46  Identities=22%  Similarity=0.391  Sum_probs=34.4

Q ss_pred             CCCCcccHHHHHHHHHHhccCCCCCCCCHHH---HHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          317 NDGDYITYSGFCEALEQLNLTGHKHGLADEE---TKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       317 ~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~---~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ++ |.|+..+-.     +.     ..+++++   ++++|..+|.|++|.|+++||...|.
T Consensus         2 ~~-g~id~~~~~-----ma-----~~l~~~~i~~l~~~F~~~D~d~~G~I~~~el~~~l~   50 (87)
T d1s6ja_           2 SS-GHIDDDDKH-----MA-----ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLK   50 (87)
T ss_dssp             CS-SSSSSHHHH-----SS-----SSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred             CC-CccCchHHH-----HH-----hhCCHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHH
Confidence            56 888887733     22     3344443   67899999999999999999997663

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

Probab=95.49  E-value=0.0061  Score=43.28  Aligned_cols=33  Identities=27%  Similarity=0.476  Sum_probs=29.2

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          341 HGLADEETKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       341 ~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      ...++++++++|+.+|.|++|.|+.+||...|.
T Consensus        10 ~~~~ee~l~~~F~~~D~d~~G~I~~~el~~~l~   42 (81)
T d1fi5a_          10 KGKTEEELSDLFRMFDKNADGYIDLEELKIMLQ   42 (81)
T ss_dssp             CCCCHHHHHHHHHHHCSSCSSEECHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Confidence            346788999999999999999999999997663

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=95.25  E-value=0.012  Score=40.98  Aligned_cols=32  Identities=22%  Similarity=0.435  Sum_probs=29.0

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          341 HGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       341 ~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ...+++++..+|+.+|.|++|.|+..||..+|
T Consensus         4 ~~~~eeel~~~F~~fD~~~~G~I~~~el~~~l   35 (75)
T d1jc2a_           4 KGKSEEELANCFRIFDKNADGFIDIEELGEIL   35 (75)
T ss_dssp             CCCCHHHHHHHHHHHCCSTTSSEEHHHHHHHH
T ss_pred             CCCcHHHHHHHHHHHcCCCcCeEcHHHHHHHH
Confidence            44788999999999999999999999999766

>d1j7qa_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=95.21  E-value=0.037  Score=36.11  Aligned_cols=65  Identities=12%  Similarity=0.134  Sum_probs=53.5

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCC-C-ceeehHHHHHHH
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDG-N-GVVDYKEFQQRI  372 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~-~-g~i~~~EF~~~~  372 (447)
                      .+.+..++|..||.|.. .--..++-..+|.++|     +..+..+.+.+|++....+ | ..|.-+|++.++
T Consensus        12 ekdecmkifdifdrnae-niapvsdtmdmltklg-----qtytkreteaimkeargpkgdkknigpeewltlc   78 (86)
T d1j7qa_          12 EKDECMKIFDIFDRNAE-NIAPVSDTMDMLTKLG-----QTYTKRETEAIMKEARGPKGDKKNIGPEEWLTLC   78 (86)
T ss_dssp             HHHHHHHHHHHHSTTTT-SCBCHHHHHHHHHHTS-----CCCSHHHHHHHHHHHHCSSCSSCCBCTTHHHHHH
T ss_pred             hHHHHHHHHHHHhcccc-ccCCcchHHHHHHHhh-----hHHhHHHHHHHHHHhcCCCCccccCCHHHHHHHH
Confidence            45577889999999999 8889999999999999     8899999999999875432 2 247778888544

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.10  E-value=0.01  Score=41.53  Aligned_cols=33  Identities=24%  Similarity=0.388  Sum_probs=26.9

Q ss_pred             CCCCHHH---HHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          341 HGLADEE---TKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       341 ~~~~~~~---~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      .++++++   ++++|..+|.|++|.|+.+||...|.
T Consensus         2 ~~lt~eqi~el~~~F~~~D~d~~G~I~~~el~~~l~   37 (77)
T d1f54a_           2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMR   37 (77)
T ss_dssp             CCCCHHHHHHHHHHHHHTCTTCSSEEEHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCCCeEChHHHHHHHH
Confidence            3567766   56679999999999999999997663

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.07  E-value=0.0075  Score=41.01  Aligned_cols=33  Identities=12%  Similarity=0.160  Sum_probs=29.0

Q ss_pred             HhhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHH
Q 013259          300 RRASLTETDAFAFLKADNDGDYITYSGFCEALEQ  333 (447)
Q Consensus       300 ~~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~  333 (447)
                      .-...++..+|+.+|.|++ |.|+.+||..+|++
T Consensus        33 ~~~~~~i~~~~~~~D~d~d-g~I~~~EF~~~m~~   65 (67)
T d1tiza_          33 YFTQEDIVKFFEEIDVDGN-GELNADEFTSCIEK   65 (67)
T ss_dssp             TSCHHHHHHHHHHHCCSSS-SEECHHHHHHHHHT
T ss_pred             ccchHHHHHHHHHhCCCCC-CeEeHHHHHHHHHH
Confidence            3455688999999999999 99999999999875

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

Probab=95.05  E-value=0.0063  Score=42.20  Aligned_cols=31  Identities=29%  Similarity=0.478  Sum_probs=25.1

Q ss_pred             CCHHH---HHHHHHHcCCCCCceeehHHHHHHHh
Q 013259          343 LADEE---TKDLWVQADIDGNGVVDYKEFQQRIW  373 (447)
Q Consensus       343 ~~~~~---~~~~~~~~D~~~~g~i~~~EF~~~~~  373 (447)
                      +++++   ++++|+.+|.|++|.|++.||...+.
T Consensus         2 Ls~eei~el~~~F~~~D~d~~G~I~~~el~~~l~   35 (73)
T d2pq3a1           2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMR   35 (73)
T ss_dssp             CCHHHHHHHHHHHHHTCTTSSSEEEGGGHHHHHH
T ss_pred             cCHHHHHHHHHHHHHHcCCCCceEeHHHHHHHHH
Confidence            44544   56679999999999999999997663

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

Probab=94.83  E-value=0.013  Score=41.39  Aligned_cols=32  Identities=16%  Similarity=0.272  Sum_probs=28.3

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL  334 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~  334 (447)
                      ...++.++|+.+|.|++ |.|+.+||..+++..
T Consensus        39 ~~~ei~~~~~~~D~d~~-G~I~~~EF~~~~~~~   70 (81)
T d2opoa1          39 TPDEVRRMMAEIDTDGD-GFISFDEFTDFARAN   70 (81)
T ss_dssp             CHHHHHHHHHHHCTTCS-SEECHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHhCCCCC-CeEeHHHHHHHHHHC
Confidence            44578899999999999 999999999998764

>d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.78  E-value=0.027  Score=41.02  Aligned_cols=69  Identities=7%  Similarity=0.010  Sum_probs=53.8

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh-ccCCCCCCCCHHHHHHHHHHcCCCC----CceeehHHHHHHHhccCc
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQL-NLTGHKHGLADEETKDLWVQADIDG----NGVVDYKEFQQRIWKTTW  377 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~-g~~~~~~~~~~~~~~~~~~~~D~~~----~g~i~~~EF~~~~~~~~~  377 (447)
                      -.++..+|..+- .+. +.++.++|...|+.- +   + ...+++.++++|..+..+.    .+.++++.|+..|..+..
T Consensus         7 R~ei~~if~~ys-~~~-~~mt~~~f~~FL~~eQ~---~-~~~~~~~~~~ii~~~e~~~~~~~~~~ls~~gF~~fL~S~~N   80 (94)
T d1qasa1           7 RAEIDRAFEEAA-GSA-ETLSVERLVTFLQHQQR---E-EEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSADG   80 (94)
T ss_dssp             CHHHHHHHHHHH-TTS-SSCBHHHHHHHHHHTSC---C-TTCSHHHHHHHHHHHCCCHHHHHTTBCCHHHHHHHHHSSTT
T ss_pred             cHHHHHHHHHHh-CCC-CccCHHHHHHHHHHHcC---C-ccCCHHHHHHHHHHHcccHhhhhcCCcCHHHHHHHHcCccc
Confidence            357788888885 344 689999999999975 3   0 3478888999999998764    367999999998877543

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.70  E-value=0.0071  Score=44.37  Aligned_cols=50  Identities=14%  Similarity=0.111  Sum_probs=36.4

Q ss_pred             HHHHHHHHHcCCCCCceeehHHHHHHHhccCcc--------cccccCCCccccccccc
Q 013259          346 EETKDLWVQADIDGNGVVDYKEFQQRIWKTTWS--------DQRNDLNDEDEDGFVKS  395 (447)
Q Consensus       346 ~~~~~~~~~~D~~~~g~i~~~EF~~~~~~~~~~--------~~~~~~~~~~~~~~~~~  395 (447)
                      +..+++|+.+|.|++|.|+.+|+...+....+.        ...|.+..|.++-.|..
T Consensus        10 ~~~~~~F~~~D~d~~G~is~~e~~~~l~~~~l~~~~l~~i~~~~D~d~dG~l~~~EF~   67 (95)
T d1c07a_          10 AKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWSLCDTKDCGKLSKDQFA   67 (95)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHTTTCCHHHHHHHHHHHCTTCSSSEETTTHH
T ss_pred             HHHHHHHHHHCCCCCCCCcHHHHHHHHHhcCCCHHHHHHHHHHhCCCCCCeEcHHHHH
Confidence            346789999999999999999999777553332        34456666777666653

>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Nucleobindin 1 (CALNUC)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.66  E-value=0.0057  Score=45.27  Aligned_cols=26  Identities=27%  Similarity=0.580  Sum_probs=23.6

Q ss_pred             HHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          347 ETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       347 ~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      .++.+|+.+|.|+||.|+.+||..++
T Consensus        17 ~~r~~F~~~D~DgdG~i~~~El~~~l   42 (99)
T d1snla_          17 NPKTFFILHDINSDGVLDEQELEALF   42 (99)
T ss_dssp             CHHHHHHHHCSSCCSEEEHHHHHHHH
T ss_pred             CHHHHHHHHCCCCCCcCCHHHHHHHH
Confidence            37889999999999999999998766

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

Probab=93.85  E-value=0.034  Score=40.34  Aligned_cols=34  Identities=12%  Similarity=0.303  Sum_probs=29.9

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhc
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLN  335 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g  335 (447)
                      .....+.++|+.+|.|+| |.|+.+||..+|..+.
T Consensus        49 ~~~~~~~~i~~~~D~n~D-G~I~F~EF~~lm~~l~   82 (93)
T d3c1va1          49 TDEAAFQKLMSNLDSNRD-NEVDFQEYCVFLSCIA   82 (93)
T ss_dssp             CSHHHHHHHHHHHCTTCS-SSEEHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHcCCCC-CCCCHHHHHHHHHHHH
Confidence            356788999999999999 9999999999987754

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=93.84  E-value=0.026  Score=39.81  Aligned_cols=30  Identities=30%  Similarity=0.397  Sum_probs=24.9

Q ss_pred             CCHHH---HHHHHHHcCCCCCceeehHHHHHHH
Q 013259          343 LADEE---TKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       343 ~~~~~---~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      +++++   ++++|..+|.|++|.|+..||...|
T Consensus         8 Lt~~~i~el~~~F~~~D~d~~G~I~~~el~~~l   40 (81)
T d1avsa_           8 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVM   40 (81)
T ss_dssp             BCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHcCCCCCeEchhHHHHHH
Confidence            55655   4567999999999999999998766

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

Probab=93.70  E-value=0.036  Score=38.42  Aligned_cols=31  Identities=10%  Similarity=0.240  Sum_probs=28.0

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQL  334 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~  334 (447)
                      ..++.++|+.+|.|++ |.|+.+||..+|.++
T Consensus        44 ~~ei~~~~~~~D~d~d-G~I~f~EF~~~m~~~   74 (76)
T d1qx2a_          44 MSTLDEMIEEVDKNGD-GEVSFEEFLVMMKKI   74 (76)
T ss_dssp             SCSHHHHHHHHCTTCS-SEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhcCCC-CcCcHHHHHHHHHHH
Confidence            4478999999999999 999999999998765

>d1h8ba_ a.39.1.7 (A:) alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: alpha-Actinin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.59  E-value=0.16  Score=34.43  Aligned_cols=59  Identities=17%  Similarity=0.298  Sum_probs=45.9

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCC-----CCCceeehHHHHHHHhc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADI-----DGNGVVDYKEFQQRIWK  374 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~-----~~~g~i~~~EF~~~~~~  374 (447)
                      ..+.+.++|+.+ .++. .+|+.+||++.            ++.++++-++..+-.     ...|..||..|+..++.
T Consensus         6 TaEqv~~aFr~l-A~~K-pyVT~~dL~~~------------L~peqaeyc~~~M~~y~~~~~~~~ayDY~sF~~~l~g   69 (73)
T d1h8ba_           6 TAEQVIASFRIL-ASDK-PYILAEELRRE------------LPPDQAQYCIKRMPAYSGPGSVPGALDYAAFSSALYG   69 (73)
T ss_dssp             THHHHHHHHHHH-TTSC-SSBCHHHHHHH------------SCHHHHHHHHHHSCSCCCSSCCTTCBCHHHHHHHHTC
T ss_pred             cHHHHHHHHHHH-hCCC-CeeCHHHHHhh------------cCHHHHHHHHHHCcccCCCCCCCCcccHHHHHHHHhc
Confidence            456788899999 4566 89999999965            667788888887743     23678999999987754

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=93.50  E-value=0.015  Score=39.59  Aligned_cols=28  Identities=32%  Similarity=0.616  Sum_probs=25.1

Q ss_pred             HHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          345 DEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       345 ~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ++++.++|+.+|.+++|.|+.+||..+|
T Consensus         1 eeel~~~F~~~D~d~~G~I~~~el~~~l   28 (68)
T d1c7va_           1 EEEILRAFKVFDANGDGVIDFDEFKFIM   28 (68)
T ss_dssp             CHHHHHHHHHHSCSGGGEECHHHHHHHS
T ss_pred             CHHHHHHHHHHcCCCcCeEcHHHHHHHH
Confidence            3679999999999999999999999655

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]

Probab=93.46  E-value=0.047  Score=39.47  Aligned_cols=32  Identities=16%  Similarity=0.231  Sum_probs=28.3

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL  334 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~  334 (447)
                      ....+.++|+.+|.|+| |+|+.+||..++..+
T Consensus        47 ~~~~v~~~~~~~D~n~D-G~I~F~EF~~li~~l   78 (92)
T d1a4pa_          47 DPLAVDKIMKDLDQCRD-GKVGFQSFFSLIAGL   78 (92)
T ss_dssp             CTTHHHHHHHHHCTTSS-SCBCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHhCCCC-CCCcHHHHHHHHHHH
Confidence            45678999999999999 999999999988664

>d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]

Probab=92.64  E-value=0.078  Score=37.77  Aligned_cols=32  Identities=13%  Similarity=0.154  Sum_probs=28.3

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL  334 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~  334 (447)
                      ....+.++++.+|.|+| |.|+.+||..++..+
T Consensus        47 ~~~~v~~i~~~~D~n~D-G~IdF~EF~~l~~~l   78 (87)
T d1xk4a1          47 RKKGADVWFKELDINTD-GAVNFQEFLILVIKM   78 (87)
T ss_dssp             HTTCHHHHHHHHCTTCS-SSBCHHHHHHHHHHH
T ss_pred             chHHHHHHHHHhCCCCC-CcCcHHHHHHHHHHH
Confidence            34578999999999999 999999999998765

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Reps1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.99  E-value=0.032  Score=40.41  Aligned_cols=53  Identities=13%  Similarity=0.009  Sum_probs=37.2

Q ss_pred             CCHHH---HHHHHHHcCCCCCceeehHHHHHHHhccCcc--------cccccCCCccccccccc
Q 013259          343 LADEE---TKDLWVQADIDGNGVVDYKEFQQRIWKTTWS--------DQRNDLNDEDEDGFVKS  395 (447)
Q Consensus       343 ~~~~~---~~~~~~~~D~~~~g~i~~~EF~~~~~~~~~~--------~~~~~~~~~~~~~~~~~  395 (447)
                      +++++   .+++|+.+|.|++|.|+.+|+...+....+.        ...|.+..|.++-.|..
T Consensus         3 ls~ee~~~y~~~F~~~D~d~~G~i~~~e~~~~l~~~~l~~~~l~~i~~~~D~d~dG~l~~~EF~   66 (92)
T d1fi6a_           3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALTLDEFC   66 (92)
T ss_dssp             CCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHSSCHHHHHHHHHHHCTTCSSEEEHHHHH
T ss_pred             CCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHHccCCHHHHHHHHHHhCCCCCCeecHHHHH
Confidence            44444   4679999999999999999999777543222        34466666777666653

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.83  E-value=0.042  Score=38.37  Aligned_cols=31  Identities=19%  Similarity=0.335  Sum_probs=27.7

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQL  334 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~  334 (447)
                      ...+.++|+.+|.|+| |.|+.+||..+|..+
T Consensus        46 ~~~v~~~~~~~D~d~d-G~Idf~EF~~l~~~l   76 (78)
T d1cb1a_          46 PRTLDDLFQELDKNGD-GEVSFEEFQVLVKKI   76 (78)
T ss_dssp             CCCSSHHHHHTCCCSS-SSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCC-CcCcHHHHHHHHHHH
Confidence            4568889999999999 999999999998765

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

Probab=91.44  E-value=0.051  Score=39.30  Aligned_cols=33  Identities=12%  Similarity=0.197  Sum_probs=28.7

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLN  335 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g  335 (447)
                      ....+.++|+.+|.|+| |.|+.+||..+|..+.
T Consensus        50 ~~~~~~~~~~~~D~d~d-G~Idf~EF~~lm~~l~   82 (93)
T d1zfsa1          50 DADAVDKIMKELDENGD-GEVDFQEFVVLVAALT   82 (93)
T ss_dssp             CHHHHHHHHHHHTTTCC-SEECSHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHcCCCC-CCCcHHHHHHHHHHHH
Confidence            35678899999999999 9999999999987653

>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a3 [TaxId: 9606]

Probab=91.20  E-value=0.085  Score=38.09  Aligned_cols=33  Identities=12%  Similarity=0.210  Sum_probs=29.2

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLN  335 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g  335 (447)
                      ....+.++++.+|.|+| |.|+.+||..+|..+.
T Consensus        50 ~~~~~~~~~~~lD~n~D-g~IdF~EF~~l~~~l~   82 (93)
T d1ksoa_          50 RECDYNKFMSVLDTNKD-CEVDFVEYVRSLACLC   82 (93)
T ss_dssp             CHHHHHHHHHHHHHTTT-CEECHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHcCCCC-CCCcHHHHHHHHHHHH
Confidence            45689999999999999 9999999999987653

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.06  E-value=0.15  Score=35.69  Aligned_cols=29  Identities=10%  Similarity=0.080  Sum_probs=26.0

Q ss_pred             CHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          344 ADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       344 ~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ....+.++|+.+|.+++|.|+.+||.+.|
T Consensus        18 ~~~~l~~~F~~~D~~~~G~i~~~ef~~~l   46 (83)
T d1wlza1          18 HYHAITQEFENFDTMKTNTISREEFRAIC   46 (83)
T ss_dssp             THHHHHHHHHHHCTTCSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCceEChhHHHHHH
Confidence            35679999999999999999999999766

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a13 [TaxId: 9606]

Probab=90.73  E-value=0.12  Score=37.57  Aligned_cols=32  Identities=9%  Similarity=0.239  Sum_probs=28.0

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL  334 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~  334 (447)
                      ....+.++|..+|.|+| |.|+..||..++..+
T Consensus        52 ~~~~v~~l~~~~D~d~D-G~IdF~EF~~l~~~l   83 (98)
T d1yuta1          52 DVGSLDEKMKSLDVNQD-SELKFNEYWRLIGEL   83 (98)
T ss_dssp             CSSCHHHHHHHHCTTCC-SCBCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhcCCCC-CcCCHHHHHHHHHHH
Confidence            34568999999999999 999999999998664

>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.94  E-value=0.078  Score=38.79  Aligned_cols=32  Identities=16%  Similarity=0.238  Sum_probs=28.3

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL  334 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~  334 (447)
                      ....+.++|+.+|.|++ |+|+.+||..+|+.+
T Consensus        43 ~~~~L~~i~~~~D~d~d-G~L~~~EF~~am~Li   74 (99)
T d1qjta_          43 PDLILGKIWDLADTDGK-GVLSKQEFFVALRLV   74 (99)
T ss_dssp             CHHHHHHHHHHHCCSSS-SSCCSHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHcCCCC-CccCHHHHHHHHHHH
Confidence            45578999999999999 999999999998754

>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]

Probab=89.90  E-value=0.18  Score=35.70  Aligned_cols=32  Identities=16%  Similarity=0.273  Sum_probs=28.1

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL  334 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~  334 (447)
                      ....+.++|+.+|.|+| |.|+..||..++..+
T Consensus        49 ~~~~v~~~~~~lD~n~D-g~idF~EF~~li~~l   80 (87)
T d1e8aa_          49 DKAVIDEIFQGLDANQD-EQVDFQEFISLVAIA   80 (87)
T ss_dssp             SHHHHHHHHHHHCTTCS-SCEEHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHcCCCC-CcCCHHHHHHHHHHH
Confidence            34679999999999999 999999999888664

>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a6 [TaxId: 9606]

Probab=89.58  E-value=0.14  Score=36.51  Aligned_cols=33  Identities=12%  Similarity=0.183  Sum_probs=28.8

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQL  334 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~  334 (447)
                      .....+.++++.+|.|+| |.|+.+||-.++..+
T Consensus        47 ~~~~~~~~~~~~lD~d~D-g~IdF~EF~~l~~~l   79 (89)
T d1k8ua_          47 LQDAEIARLMEDLDRNKD-QEVNFQEYVTFLGAL   79 (89)
T ss_dssp             TTSHHHHHHHHHHHHTTT-CEEEHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhcCCCC-CCCcHHHHHHHHHHH
Confidence            355679999999999999 999999999988764

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=89.43  E-value=0.15  Score=35.77  Aligned_cols=32  Identities=6%  Similarity=0.132  Sum_probs=28.0

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHH
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQ  333 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~  333 (447)
                      -...++.++|..+|.|++ |.|+.+||..+|..
T Consensus        49 ~t~~el~~~i~~~D~d~~-G~I~f~eFl~im~~   80 (82)
T d1wrka1          49 PTPEELQEMIDEVDEDGS-GTVDFDEFLVMMVR   80 (82)
T ss_dssp             CCHHHHHHHHHTTCTTCC-SSBCHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhCCCCC-CeEeHHHHHHHHHh
Confidence            355789999999999999 99999999988753

>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]

Probab=89.20  E-value=0.085  Score=38.67  Aligned_cols=33  Identities=21%  Similarity=0.296  Sum_probs=28.8

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhc
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQLN  335 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g  335 (447)
                      ....+.++|+.+|.|+| |.|+.+||..++..+.
T Consensus        50 ~~~~v~~~~~~~D~n~D-G~I~F~EF~~li~~l~   82 (100)
T d1psra_          50 GTNYLADVFEKKDKNED-KKIDFSEFLSLLGDIA   82 (100)
T ss_dssp             TCCGGGTHHHHHCTTCS-SCBCHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhcCCCC-CcCcHHHHHHHHHHHH
Confidence            44578889999999999 9999999999987764

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.41  E-value=0.2  Score=36.10  Aligned_cols=30  Identities=13%  Similarity=0.113  Sum_probs=26.2

Q ss_pred             hhhHHHHhhhhcCCCCCCcccHHHHHHHHHH
Q 013259          303 SLTETDAFAFLKADNDGDYITYSGFCEALEQ  333 (447)
Q Consensus       303 ~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~  333 (447)
                      ...+.+++..+|.|++ |+|+.+||..++..
T Consensus        42 ~~~L~~Iw~~~D~~~d-G~l~~~EF~~a~~L   71 (95)
T d2jxca1          42 VDILGRVWELSDIDHD-GMLDRDEFAVAMFL   71 (95)
T ss_dssp             HHHHHHHHHHHCTTCS-SEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCC-CeEcHHHHHHHHHH
Confidence            3578999999999999 99999999877654

>d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Diacylglycerol kinase alpha, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.27  E-value=0.12  Score=39.15  Aligned_cols=48  Identities=17%  Similarity=0.264  Sum_probs=39.4

Q ss_pred             CCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCC------CCCceeehHHHHHHH
Q 013259          317 NDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADI------DGNGVVDYKEFQQRI  372 (447)
Q Consensus       317 ~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~------~~~g~i~~~EF~~~~  372 (447)
                      .. +.|+.++|.++.+.-.       +++.+|++|++.|-.      ..+|.|++++|...+
T Consensus         4 ~~-s~l~p~~l~~L~~~T~-------fs~~ei~~l~~~Fk~~~~~~~~p~g~i~~~~F~~~~   57 (118)
T d1tuza_           4 ER-GLISPSDFAQLQKYME-------YSTKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFL   57 (118)
T ss_dssp             CC-SCSCHHHHHHHHHHHH-------HCCCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHH
T ss_pred             cc-CCCCHHHHHHHHHHcC-------CCHHHHHHHHHHHhccccccCCcccccCHHHHHHHH
Confidence            44 7899999999998866       788889999999832      357999999998554

>d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Pob1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.92  E-value=0.2  Score=37.25  Aligned_cols=32  Identities=22%  Similarity=0.348  Sum_probs=27.8

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL  334 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~  334 (447)
                      ....|.+++..+|.|++ |+|+.+||..+|.-+
T Consensus        54 ~~~~L~~Iw~l~D~d~d-G~l~~~EF~~am~Li   85 (110)
T d1iq3a_          54 SIPELSYIWELSDADCD-GALTLPEFCAAFHLI   85 (110)
T ss_dssp             SSCCHHHHHHHHCSSSC-SEEEHHHHHHHHHHH
T ss_pred             chHHHHHHHHHhccCCC-CeECHHHHHHHHHHH
Confidence            34578999999999999 999999999887654

>d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]

Probab=84.58  E-value=0.4  Score=34.45  Aligned_cols=34  Identities=15%  Similarity=0.215  Sum_probs=28.9

Q ss_pred             hhhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHhc
Q 013259          301 RASLTETDAFAFLKADNDGDYITYSGFCEALEQLN  335 (447)
Q Consensus       301 ~~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~g  335 (447)
                      .....+.++|+.+|.|+| |.|+.+||-.++..+.
T Consensus        49 ~d~~~vd~im~~LD~n~D-g~vdF~EF~~li~~la   82 (95)
T d1qlsa_          49 KDPGVLDRMMKKLDLDSD-GQLDFQEFLNLIGGLA   82 (95)
T ss_dssp             CCTHHHHHHHHHHCTTCS-SSBCHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhcCCCC-CcCcHHHHHHHHHHHH
Confidence            344679999999999999 9999999988876653

>d2cclb1 a.139.1.1 (B:1-59) Endo-1,4-beta-xylanase Y {Clostridium thermocellum [TaxId: 1515]}

class: All alpha proteins
fold: Type I dockerin domain
superfamily: Type I dockerin domain
family: Type I dockerin domain
domain: Endo-1,4-beta-xylanase Y
species: Clostridium thermocellum [TaxId: 1515]

Probab=82.47  E-value=1.8  Score=27.72  Aligned_cols=48  Identities=19%  Similarity=0.282  Sum_probs=37.2

Q ss_pred             cCCCCCCcccHHHHHHHHHHh-ccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHH
Q 013259          314 KADNDGDYITYSGFCEALEQL-NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQ  370 (447)
Q Consensus       314 D~~~~~G~i~~~el~~~l~~~-g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~  370 (447)
                      |.|+| |.|+..++..+.+-+ |.    ..+++.+    +...|.|+||.|+..+.+.
T Consensus         2 DvN~D-g~vni~D~~~l~~~il~~----~~~~~~~----~~aaDvn~Dg~i~i~D~~~   50 (59)
T d2cclb1           2 DVNGD-GTINSTDLTMLKRSVLRA----ITLTDDA----KARADVDKNGSINAADVLL   50 (59)
T ss_dssp             CTTCS-SSCCHHHHHHHHHHHTTS----SCCCHHH----HHHHCTTCSSCCSHHHHHH
T ss_pred             CCCCC-CCCcHHHHHHHHHHHhCC----CCCChhh----hhccccCCCCCCCHHHHHH
Confidence            67899 999999999887754 41    3355543    4678999999999988873

>d1dava_ a.139.1.1 (A:) Cellulosome endoglucanase SS {Clostridium thermocellum [TaxId: 1515]}

class: All alpha proteins
fold: Type I dockerin domain
superfamily: Type I dockerin domain
family: Type I dockerin domain
domain: Cellulosome endoglucanase SS
species: Clostridium thermocellum [TaxId: 1515]

Probab=82.18  E-value=0.18  Score=34.23  Aligned_cols=45  Identities=13%  Similarity=0.227  Sum_probs=34.6

Q ss_pred             cCCCCCCcccHHHHHHHHHHh-ccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHH
Q 013259          314 KADNDGDYITYSGFCEALEQL-NLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ  369 (447)
Q Consensus       314 D~~~~~G~i~~~el~~~l~~~-g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~  369 (447)
                      |.|+| |.|+..++..+++.+ |     .. +..+    ...+|.|+||.|+..+++
T Consensus         8 DvN~D-G~Vd~~D~~~~~~~i~~-----~~-~~~~----~~~aDvn~DG~Id~~D~~   53 (71)
T d1dava_           8 DVNDD-GKVNSTDAVALKRYVLR-----SG-ISIN----TDNADLNEDGRVNSTDLG   53 (71)
T ss_dssp             CSSSS-SBSSGGGHHHHHHHHHC-----SC-SCCC----GGGTCSSSSSSCSSHHHH
T ss_pred             ccCCC-CCCcHHHHHHHHHHHcC-----CC-CcCC----CcceecCCCCCcCHHHHH
Confidence            77999 999999999888875 4     21 1111    225899999999999998

>d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Cow (Bos taurus), s100b [TaxId: 9913]

Probab=82.12  E-value=0.75  Score=32.55  Aligned_cols=32  Identities=13%  Similarity=0.201  Sum_probs=27.8

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL  334 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~  334 (447)
                      ....+.++|+.+|.|+| |.|+.+||-.++..+
T Consensus        50 d~~~~d~~m~~LD~n~D-g~vdF~EF~~li~~l   81 (90)
T d3cr5x1          50 EQEVVDKVMETLDSDGD-GECDFQEFMAFVAMI   81 (90)
T ss_dssp             SHHHHHHHHHHHCTTSS-SSBCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhcCCCC-CcCCHHHHHHHHHHH
Confidence            34579999999999999 999999998887665

>d1wlma1 a.39.1.11 (A:8-145) Protein cgi-38 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: p25-alpha
domain: Protein cgi-38
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=82.08  E-value=2.9  Score=31.87  Aligned_cols=68  Identities=9%  Similarity=0.269  Sum_probs=48.9

Q ss_pred             hhHHHHhhhhcC----CCCCCcccHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHcCCCCCceeehHHHHHHH
Q 013259          304 LTETDAFAFLKA----DNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRI  372 (447)
Q Consensus       304 ~~l~~~F~~~D~----~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~EF~~~~  372 (447)
                      ..|+++|..|-.    ..++-.++...+..+|+..++-+ ...++..+++-+|..+-.-+...|+|++|++.|
T Consensus         8 ~~L~~~F~~F~~fG~~k~~~~~m~~~~f~K~~kd~~lid-~K~~T~t~~diiF~k~k~k~~r~i~f~~F~~aL   79 (138)
T d1wlma1           8 AGLEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVAD-GKAVTGTDVDIVFSKVKAKSARVINYEEFKKAL   79 (138)
T ss_dssp             CSHHHHHHHHHTSSCSSCCSSEEEHHHHHHHHHHTSCCC-SSSSCHHHHHHHHHHHSCSSCSEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCCcccCCHHHHHHHHHHcCCCc-CCccchhhHHHHHHHhhcCCCcccCHHHHHHHH
Confidence            355666655543    12302499999999999877531 124899999999999866667789999998766

>d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100p [TaxId: 9606]

Probab=81.11  E-value=0.9  Score=32.41  Aligned_cols=32  Identities=16%  Similarity=0.198  Sum_probs=27.0

Q ss_pred             hhhhHHHHhhhhcCCCCCCcccHHHHHHHHHHh
Q 013259          302 ASLTETDAFAFLKADNDGDYITYSGFCEALEQL  334 (447)
Q Consensus       302 ~~~~l~~~F~~~D~~~~~G~i~~~el~~~l~~~  334 (447)
                      ....+.++|+.+|.|+| |.|+.+||-.++-.+
T Consensus        50 d~~~vd~~m~~LD~n~D-g~vdF~EF~~li~~l   81 (94)
T d1j55a_          50 DKDAVDKLLKDLDANGD-AQVDFSEFIVFVAAI   81 (94)
T ss_dssp             --CHHHHHHHHHCSSSS-SSEEHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhcCCCC-CcCCHHHHHHHHHHH
Confidence            45679999999999999 999999998887654