Citrus Sinensis ID: 013275

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440------
Protein Sequence
MSSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTKVRVVKVGATHFQEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFDKLEKITYDSLPDLEIFVDQD
Secondary Structure (PSIPRED)
cccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEccccccEEEEEEEEEEEcccEEEEEcccccccccccccccEEEEEEEEEEEEEccEEEEEEEEEEcccccEEEEEEEEEEEEEccEEEEEEEEEEcccccccccEEEEEEEEEccccccEEEEEEEEEEcccccEEEcccccccccccccccccccccEEEEccccEEEEEEEEEEccccccccccccccEEcEEEEEEEEcccccccEEEEEEEEEEccccccEEEEEEEcccEEEEcccEEEEEEEEEccccccccEEEEEEccccccccEEEEEcccEEEEcccccccEEEEEEEEEEccccEEEEccEEEEEccccEEEcccccEEEEEccc
Secondary Structure Prediction (SSPRO)
ccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEEEEEcccccEEEEEEEEEEEEccccEEEcccccccccccccccccccEEEEEEEHHcccEEEEEEEEEEcccccEEEEEEEEEEEEccccEEEEEEEcccccccccccEEEEEEEEEEcccccEEEEEEEEccccccEEEEcccccccccccccccccccccccEEccccEEEEEEEEEcccccccccccccccEEEEEEEEEEEccccccccEEcccccccccccccEEEEEEEcccEEEEEEcEEEEEEEEEccccccccEEEEEEccccccEEEEEEcccEccccccccccccEEEEEEEEEccccEEEEcEEEEEEccccEEEEccccEEEEEccc
Coil and Loop (DISEMBL)
msstpgthsLAFRVMRlcrpslhvepplrvdptdlfigedifddpiaasnlpplissdvttnkssdltyRSRFLLhdsadsiglsgllvlpqafgaiylgeTFCSYISinnsstlevRDVVIKAEIQTDKQRILLLdtskspvesiraggrydfIVEHDVKELGAHTLVCTAlysdgegerkyLPQFFKFIvsnplsvrtKVRVVKVGATHFQEITFLEACIENHtksnlymdqvefepsqnwsatmlkadgphsdynaqsreifkppvlirsgggiHNYLYQLKmlshgssspvkvqgsnvlgklqitwrtnlgepgrlqtQQILGTTITSKEIElnvvevpsvvgidkpfllklkltnqtdkeqgpfeiwlsqndsdeekVVMINGLRIMalapveafgstdFHLNLIATKLGVQRITGITVFDKLekitydslpdleifvdqd
Flexible Loop (DISEMBL)
msstpgthslAFRVMRLCrpslhvepplrvDPTDLFIGEDIFDDPIAasnlpplissdvttnksSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAeiqtdkqrillldtskspvesiRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIvsnplsvrTKVRVVKVGATHFQEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWrtnlgepgrlqtQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLtnqtdkeqgpfeiwlsqndsdEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFDKlekitydslpdleifvdqd
Low Complexity Region (SEG)
MSSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTKVRVVKVGATHFQEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTNLGEPGRlqtqqilgttitSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFDKLEKITYDSLPDLEIFVDQD
Disordered region (IsUnstruct)
*********LAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLIS*********DLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTKVRVVKVGATHFQEITFLEACIENHTKSNLYMDQVEF*************************EIFKPPVLIRSGGGIHNYLYQLKMLSHG****VKVQGSNVLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTN*********EIW**********VVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFDKLEKITYDSLPDLEIFV***
Disordered Region (DISOPRED)
*****GT**LAFRVMRLCRPSLHVEPPLRVDPTDLFIG******************************************SIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTD********************GRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTKV************ITFLEACIENHTKSNLYMDQVEFEPSQNWSATM********************PVLIRSGGGIHNYLYQLKML************SNVLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFDKLEKITYDSLPDLEIFVDQD
Disordered Region (DISEMBL)
MSSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTKVRVVKVGATHFQEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSH********QGSNVLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFDKLEKITYDSLPDLEIFVDQD
Disordered Region (DISPRO)
*****GTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGE**************************************SADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTKVRVVKVGATHFQEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKA***********REIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFDKLEKITYDSLPDLEIFVDQ*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTKVRVVKVGATHFQEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFDKLEKITYDSLPDLEIFVDQD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	446	2.2.26 [Sep-21-2011]
Q5RCG0	417	UPF0533 protein C5orf44 h	yes	no	0.860	0.920	0.318	1e-52
A5PLN9	417	UPF0533 protein C5orf44 O	yes	no	0.860	0.920	0.316	1e-52
Q6PBY7	412	UPF0533 protein C5orf44 h	yes	no	0.849	0.919	0.325	3e-52
A7MB76	417	UPF0533 protein C5orf44 h	yes	no	0.860	0.920	0.311	2e-51
Q3TIR1	417	UPF0533 protein C5orf44 h	yes	no	0.869	0.930	0.317	4e-51
Q5M887	418	UPF0533 protein C5orf44 h	yes	no	0.872	0.930	0.317	6e-51
Q0VFT9	412	UPF0533 protein C5orf44 h	yes	no	0.856	0.927	0.318	3e-49
Q6GPR5	414	UPF0533 protein C5orf44 h	N/A	no	0.860	0.927	0.316	1e-47
A8WX89	401	UPF0533 protein CBG04321	N/A	no	0.872	0.970	0.306	2e-47
Q95QQ2	401	UPF0533 protein C56C10.7	yes	no	0.874	0.972	0.298	3e-47

>sp|Q5RCG0|CE044_PONAB UPF0533 protein C5orf44 homolog OS=Pongo abelii PE=2 SV=1

 Score =  207 bits (528), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 138/433 (31%), Positives = 217/433 (50%), Gaps = 49/433 (11%)

Query: 8   HSLAFRVMRLCRPSLHVEPPLRVD----PTDLFIGEDIFDDPIAASNLPPLISSDVTTNK 63
           H LA +VMRL +P+L    P+  +    P DLF  + + DDP                  
Sbjct: 10  HLLALKVMRLTKPTLFTNIPVTCEERDLPGDLF-NQLMRDDPSTV--------------- 53

Query: 64  SSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIK 123
                        + A+ + L  +L LPQ FG I+LGETF SYIS++N S   V+D+++K
Sbjct: 54  -------------NGAEVLMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVK 100

Query: 124 AEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKY 183
           A++QT  QR L L  S + V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y
Sbjct: 101 ADLQTSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQAGEKMY 159

Query: 184 LPQFFKFIVSNPLSVRTKVRVVKVGATHFQEITFLEACIENHTKSNLYMDQVEFEPSQNW 243
             +FFKF V  PL V+TK    +   +   +  FLEA I+N T S ++M++V  EPS  +
Sbjct: 160 FRKFFKFQVLKPLDVKTKFYNAESDLSSVTDEVFLEAQIQNMTTSPMFMEKVSLEPSIMY 219

Query: 244 SATMLK--ADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSN 301
           + T L   +    S     SR   +P            YLY LK     +     ++G  
Sbjct: 220 NVTELNSVSQAGESVSTFGSRAYLQP-------MDTRQYLYCLKPKKEFAEKAGIIKGVT 272

Query: 302 VLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQ 361
           V+GKL I W+TNLGE GRLQT Q+        ++ L++  +P  V +++PF +  K+TN 
Sbjct: 273 VIGKLDIVWKTNLGERGRLQTSQLQRMAPGYGDVRLSLEAIPDTVNLEEPFHITCKITNC 332

Query: 362 TDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITG 421
           +++     ++ L   +++      I+G ++  L P  +       L L+++  G+Q I+G
Sbjct: 333 SER---TMDLVLEMCNTNSIHWCGISGRQLGKLHPSSSLC---LALTLLSSVQGLQSISG 386

Query: 422 ITVFDKLEKITYD 434
           + + D   K TY+
Sbjct: 387 LRLTDTFLKRTYE 399

Pongo abelii (taxid: 9601)

>sp|A5PLN9|CE044_HUMAN UPF0533 protein C5orf44 OS=Homo sapiens GN=C5orf44 PE=2 SV=2

 Score =  207 bits (527), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 137/433 (31%), Positives = 219/433 (50%), Gaps = 49/433 (11%)

Query: 8   HSLAFRVMRLCRPSLHVEPPLRVD----PTDLFIGEDIFDDPIAASNLPPLISSDVTTNK 63
           H LA +VMRL +P+L    P+  +    P DLF  + + DDP                  
Sbjct: 10  HLLALKVMRLTKPTLFTNIPVTCEEKDLPGDLF-NQLMRDDPSTV--------------- 53

Query: 64  SSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIK 123
                        + A+ + L  +L LPQ FG I+LGETF SYIS++N S   V+D+++K
Sbjct: 54  -------------NGAEVLMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVK 100

Query: 124 AEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKY 183
           A++QT  QR L L  S + V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y
Sbjct: 101 ADLQTSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQAGEKMY 159

Query: 184 LPQFFKFIVSNPLSVRTKVRVVKVGATHFQEITFLEACIENHTKSNLYMDQVEFEPSQNW 243
             +FFKF V  PL V+TK    +   +   +  FLEA I+N T S ++M++V  EPS  +
Sbjct: 160 FRKFFKFQVLKPLDVKTKFYNAESDLSSVTDEVFLEAQIQNMTTSPMFMEKVSLEPSIMY 219

Query: 244 SATMLKADGPHSDYNAQ--SREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSN 301
           + T L +     +  +   SR   +P            YLY LK  +  +     ++G  
Sbjct: 220 NVTELNSVSQAGECVSTFGSRAYLQP-------MDTRQYLYCLKPKNEFAEKAGIIKGVT 272

Query: 302 VLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQ 361
           V+GKL I W+TNLGE GRLQT Q+        ++ L++  +P  V +++PF +  K+TN 
Sbjct: 273 VIGKLDIVWKTNLGERGRLQTSQLQRMAPGYGDVRLSLEAIPDTVNLEEPFHITCKITNC 332

Query: 362 TDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITG 421
           +++     ++ L   +++      I+G ++  L P  +       L L+++  G+Q I+G
Sbjct: 333 SER---TMDLVLEMCNTNSIHWCGISGRQLGKLHPSSSLC---LALTLLSSVQGLQSISG 386

Query: 422 ITVFDKLEKITYD 434
           + + D   K TY+
Sbjct: 387 LRLTDTFLKRTYE 399

Homo sapiens (taxid: 9606)

>sp|Q6PBY7|CE044_DANRE UPF0533 protein C5orf44 homolog OS=Danio rerio GN=zgc:73187 PE=2 SV=2

 Score =  206 bits (524), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 141/433 (32%), Positives = 221/433 (51%), Gaps = 54/433 (12%)

Query: 8   HSLAFRVMRLCRPSLHVEPPLRVD----PTDLFIGEDIFDDPIAASNLPPLISSDVTTNK 63
           H LA +VMRL +P+L    P+  +    P DLF+                L+  D +T K
Sbjct: 10  HLLALKVMRLTKPTLFTNMPVTCEDRDLPGDLFLR---------------LMKDDPSTVK 54

Query: 64  SSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIK 123
                          A+++ L  +L LPQ FG I+LGETF SYIS++N S+  V+D+++K
Sbjct: 55  G--------------AETLILGEMLTLPQNFGNIFLGETFSSYISVHNDSSQVVKDILVK 100

Query: 124 AEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKY 183
           A++QT  QR L L  S S V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y
Sbjct: 101 ADLQTSSQR-LNLSASNSAVSELKPECCIDDVIHHEVKEIGTHILVCAVSYTTQTGEKLY 159

Query: 184 LPQFFKFIVSNPLSVRTKVRVVKVGATHFQEITFLEACIENHTKSNLYMDQVEFEPSQNW 243
             +FFKF V  PL V+TK    +          FLEA I+N T S ++M++V  EPS  +
Sbjct: 160 FRKFFKFQVLKPLDVKTKFYNAETDE------VFLEAQIQNITTSPMFMEKVSLEPSMMY 213

Query: 244 SATMLK--ADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSN 301
           + T L   A G  S  +   +  +  P+  R       YLY LK     +     ++G  
Sbjct: 214 NVTELNNVASGDESSESTFGKMSYLQPLDTR------QYLYCLKPKPEFAEKAGVIKGVT 267

Query: 302 VLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQ 361
           V+GKL I W+TNLGE GRLQT Q+        ++ L++  +P  V +++PF +  K+TN 
Sbjct: 268 VIGKLDIVWKTNLGERGRLQTSQLQRMAPGYGDVRLSLEFIPDTVDLEEPFDITCKITNC 327

Query: 362 TDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITG 421
           +++     ++ L   ++       ++G ++  L+P     S    L L+++  G+Q I+G
Sbjct: 328 SERT---MDLLLEMCNTRSVHWCGVSGRQLGKLSPS---ASLSIPLKLLSSVQGLQSISG 381

Query: 422 ITVFDKLEKITYD 434
           + + D   K TY+
Sbjct: 382 LRLTDTFLKRTYE 394

Danio rerio (taxid: 7955)

>sp|A7MB76|CE044_BOVIN UPF0533 protein C5orf44 homolog OS=Bos taurus PE=2 SV=1

 Score =  203 bits (516), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/433 (31%), Positives = 216/433 (49%), Gaps = 49/433 (11%)

Query: 8   HSLAFRVMRLCRPSLHVEPPLRVD----PTDLFIGEDIFDDPIAASNLPPLISSDVTTNK 63
           H LA +VMRL +P+L    P+  +    P DLF  + + DDP                  
Sbjct: 10  HLLALKVMRLTKPTLFTNIPVTCEEKDLPGDLF-NQLMRDDPSTV--------------- 53

Query: 64  SSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIK 123
                        + A+ + L  +L LPQ FG I+LGETF SYIS++N S   V+D+++K
Sbjct: 54  -------------NGAEILMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVK 100

Query: 124 AEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKY 183
           A++QT  QR L L  S + V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y
Sbjct: 101 ADLQTSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQSGEKMY 159

Query: 184 LPQFFKFIVSNPLSVRTKVRVVKVGATHFQEITFLEACIENHTKSNLYMDQVEFEPSQNW 243
             +FFKF V  PL V+TK    +   +   +  FLEA I+N T S ++M++V  EPS  +
Sbjct: 160 FRKFFKFQVLKPLDVKTKFYNAESDLSSVTDEVFLEAQIQNITTSPMFMEKVSLEPSIMY 219

Query: 244 SATMLKADGPHSDYNAQ--SREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSN 301
           +   L +     +      SR   +P            YLY LK     +     ++G  
Sbjct: 220 NVAELNSVNQAGECVTTFGSRAYLQP-------MDTRQYLYCLKPKKEFAEKAGIIKGVT 272

Query: 302 VLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQ 361
           V+GKL I W+TNLGE GRLQT Q+        ++ L++  +P  V +++PF +  K+TN 
Sbjct: 273 VIGKLDIVWKTNLGERGRLQTSQLQRMAPGYGDVRLSLEAIPDTVNLEEPFHITCKITNC 332

Query: 362 TDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITG 421
           +++     ++ L   +++      I+G ++  L P  +       L L+++  G+Q ++G
Sbjct: 333 SER---TMDLVLEMCNTNSIHWCGISGRQLGKLHPSSSLC---LALTLLSSVQGLQSVSG 386

Query: 422 ITVFDKLEKITYD 434
           + + D   K TY+
Sbjct: 387 LRLTDTFLKRTYE 399

Bos taurus (taxid: 9913)

>sp|Q3TIR1|CE044_MOUSE UPF0533 protein C5orf44 homolog OS=Mus musculus PE=2 SV=1

 Score =  202 bits (514), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 136/429 (31%), Positives = 220/429 (51%), Gaps = 41/429 (9%)

Query: 8   HSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDL 67
           H LA +VMRL +P+L    P+  +  DL    D+F+          L+  D +T      
Sbjct: 10  HLLALKVMRLTKPTLFTNIPVTCEEKDL--PGDLFNQ---------LMKDDPST------ 52

Query: 68  TYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQ 127
                    + A+ + L  +L LPQ FG I+LGETF SYIS++N S   V+D+++KA++Q
Sbjct: 53  --------VNGAEILMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKADLQ 104

Query: 128 TDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQF 187
           T  QR L L  S + V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y  +F
Sbjct: 105 TSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQGGEKMYFRKF 163

Query: 188 FKFIVSNPLSVRTKVRVVKVGATHFQEITFLEACIENHTKSNLYMDQVEFEPSQNWSATM 247
           FKF V  PL V+TK    +   +   +  FLEA I+N T S ++M++V  EPS  ++ T 
Sbjct: 164 FKFQVLKPLDVKTKFYNAESDLSSVTDEVFLEAQIQNITTSPMFMEKVSLEPSIMYNVTE 223

Query: 248 LKADGPHSDYNAQ--SREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGK 305
           L +     +  +   SR   +P            YLY LK     +     ++G  V+GK
Sbjct: 224 LNSVTQAGECISTFGSRGYLQP-------MDTRQYLYCLKPKKEFAEKAGIIKGVTVIGK 276

Query: 306 LQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKE 365
           L I W+TNLGE GRLQT Q+        ++ L++  +P  V +++PF +  K+TN +++ 
Sbjct: 277 LDIVWKTNLGERGRLQTSQLQRMAPGYGDVRLSLEAIPDTVNLEEPFHITCKITNCSERM 336

Query: 366 QGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVF 425
               ++ L   +++      I+G ++  L P  +       L L+++  G+Q ++G+ + 
Sbjct: 337 ---MDLVLEMCNTNSIHWCGISGRQLGKLHPSSSLC---LALTLLSSVQGLQSVSGLRLT 390

Query: 426 DKLEKITYD 434
           D   K TY+
Sbjct: 391 DTFLKRTYE 399

Mus musculus (taxid: 10090)

>sp|Q5M887|CE044_RAT UPF0533 protein C5orf44 homolog OS=Rattus norvegicus PE=2 SV=2

 Score =  201 bits (512), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 136/429 (31%), Positives = 218/429 (50%), Gaps = 40/429 (9%)

Query: 8   HSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDL 67
           H LA +VMRL +P+L    P+  +  DL    D+F+          L+  D +T      
Sbjct: 10  HLLALKVMRLTKPTLFTNIPVTCEEKDL--PGDLFNQ---------LMKDDPST------ 52

Query: 68  TYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQ 127
                    + A+ + L  +L LPQ FG I+LGETF SYIS++N S   V+D+++KA++Q
Sbjct: 53  --------VNGAEILMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKADLQ 104

Query: 128 TDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQF 187
           T  QR L L  S + V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y  +F
Sbjct: 105 TSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQGGEKMYFRKF 163

Query: 188 FKFIVSNPLSVRTKVRVVKVGATHFQEITFLEACIENHTKSNLYMDQVEFEPSQNWSATM 247
           FKF V  PL V+TK    +   +   +  FLEA I+N T S ++M++V  EPS  ++ T 
Sbjct: 164 FKFQVLKPLDVKTKFYNAESDLSSVTDEVFLEAQIQNITTSPMFMEKVSLEPSIMYNVTE 223

Query: 248 LKADGPHSDYNAQ--SREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGK 305
           L +     +  +   SR   +P            YLY LK     +     ++G  V+GK
Sbjct: 224 LNSVNQAGECVSTFGSRGYLQP-------MDTRQYLYCLKPKKEFAEKAGIIKGVTVIGK 276

Query: 306 LQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKE 365
           L I W+TNLGE GRLQT Q+        ++ L++  +P  V +++PF +  K+TN + + 
Sbjct: 277 LDIVWKTNLGERGRLQTSQLQRMAPGYGDVRLSLEAIPDTVNLEEPFHITCKITNCSSER 336

Query: 366 QGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVF 425
               ++ L   ++       I+G ++  L P  +       L L+++  G+Q ++G+ + 
Sbjct: 337 T--MDLVLEMCNTTSIHWCGISGRQLGKLHPSSSLC---LALTLLSSVQGLQSVSGLRLT 391

Query: 426 DKLEKITYD 434
           D   K TY+
Sbjct: 392 DTFLKRTYE 400

Rattus norvegicus (taxid: 10116)

>sp|Q0VFT9|CE044_XENTR UPF0533 protein C5orf44 homolog OS=Xenopus tropicalis PE=2 SV=1

 Score =  196 bits (498), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 137/430 (31%), Positives = 219/430 (50%), Gaps = 48/430 (11%)

Query: 8   HSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDL 67
           H LA +VMRL +P+L    P+  +  DL    D+F           L+  D +T K    
Sbjct: 10  HLLALKVMRLTKPTLFTNIPVTCEERDL--PGDLFS---------TLMKDDPSTVKG--- 55

Query: 68  TYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQ 127
                      A+++ L  +L LPQ FG I+LGETF SYIS++N S   V+D+ +KA++Q
Sbjct: 56  -----------AETLMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDIQVKADLQ 104

Query: 128 TDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQF 187
           T  QR L L  S + V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y  +F
Sbjct: 105 TSSQR-LNLSASTAVVSELKPDSCIDDVIHHEVKEIGTHILVCAVSYTTQTGEKMYFRKF 163

Query: 188 FKFIVSNPLSVRTKVRVVKVGATHFQEITFLEACIENHTKSNLYMDQVEFEPSQNWSATM 247
           FKF V  PL V+TK    +          FLEA I+N T S ++M++V  EPS  ++ + 
Sbjct: 164 FKFQVLKPLDVKTKFYNAETDEV------FLEAQIQNITTSPMFMEKVSLEPSIMYNVSE 217

Query: 248 LKADGPHSD-YNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKL 306
           L     + D  +    + +  P+  R       YLY LK     +     ++G  V+GKL
Sbjct: 218 LNTVITNGDGCSTFGTKTYLQPLDTR------QYLYCLKPKPEFAEKAGVIKGVTVIGKL 271

Query: 307 QITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQ 366
            I W+TNLGE GRLQT Q+        ++ L++  +P  V +++PF +  K+TN + +  
Sbjct: 272 DIVWKTNLGERGRLQTSQLQRMAPGYGDVRLSIETIPDTVRLEEPFDITCKITNCSSERT 331

Query: 367 GPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLN--LIATKLGVQRITGITV 424
              ++ L   +++      ++G ++  L P     S+  HL   L+++  G+Q ++G+ +
Sbjct: 332 --MDLVLEMCNTNAIHWCGVSGRQLGKLHP-----SSSLHLTLALLSSVQGLQSVSGLRL 384

Query: 425 FDKLEKITYD 434
            D   K TY+
Sbjct: 385 TDTFLKRTYE 394

Xenopus tropicalis (taxid: 8364)

>sp|Q6GPR5|CE044_XENLA UPF0533 protein C5orf44 homolog OS=Xenopus laevis PE=2 SV=2

 Score =  191 bits (484), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 136/430 (31%), Positives = 217/430 (50%), Gaps = 46/430 (10%)

Query: 8   HSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDL 67
           H LA +VMRL +P+L    P+  +  DL    D+F           L+  D +T K +++
Sbjct: 10  HLLALKVMRLTKPTLFTNIPVTCEEKDL--PGDLFS---------TLMKDDPSTVKGAEI 58

Query: 68  TYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQ 127
                         + L  +L LPQ FG I+LGETF SYIS++N S   V+DV +KA++Q
Sbjct: 59  --------------LMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDVQVKADLQ 104

Query: 128 TDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQF 187
           T  QR L L  S + V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y  +F
Sbjct: 105 TSSQR-LNLSASSAVVADLKPDSCIDDVIHHEVKEIGTHILVCAVSYTIQSGEKMYFRKF 163

Query: 188 FKFIVSNPLSVRTKVRVVKVGATHFQEITFLEACIENHTKSNLYMDQVEFEPSQNWSATM 247
           FKF V  PL V+TK    +          FLEA I+N T S ++M++V  EPS  ++ + 
Sbjct: 164 FKFQVLKPLDVKTKFYNAETDEV------FLEAQIQNITTSPMFMEKVSLEPSIMYNVSE 217

Query: 248 LKADGPHSDYNAQSR---EIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLG 304
           L     + D+   S    + +  P+  R       YLY LK     +     ++G  V+G
Sbjct: 218 LNTVITNGDWKGSSTFGTKTYLQPLDTR------QYLYCLKPKPEFAEKAGVIKGVTVIG 271

Query: 305 KLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDK 364
           KL I W+TNLGE GRLQT Q+        ++ L++  +P  V +++PF +  K+TN + +
Sbjct: 272 KLDIVWKTNLGERGRLQTSQLQRMAPGYGDVRLSIETIPDTVRLEEPFDITCKITNCSSE 331

Query: 365 EQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITV 424
                ++ L   +++      ++G ++  L P  +   T   L+ +    G+Q ++G+ +
Sbjct: 332 RT--MDLVLEMCNTNAIHWSGVSGRQLGKLHPSSSLHLTLTLLSSVQ---GLQSVSGLRL 386

Query: 425 FDKLEKITYD 434
            D   K TY+
Sbjct: 387 TDTFLKRTYE 396

Xenopus laevis (taxid: 8355)

>sp|A8WX89|U533_CAEBR UPF0533 protein CBG04321 OS=Caenorhabditis briggsae GN=CBG04321 PE=3 SV=2

 Score =  190 bits (483), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 138/450 (30%), Positives = 225/450 (50%), Gaps = 61/450 (13%)

Query: 1   MSSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVT 60
           +S++     LA RVMRL RP        +  P D F       DP+  +    L++  V 
Sbjct: 5   ISNSSTQQLLALRVMRLARP--------KFAPLDGFS-----HDPVDPTGFGELLAGKV- 50

Query: 61  TNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDV 120
               ++++  SR   HD    + +   L+ PQ F  IYLGETF  Y+++ N S   V +V
Sbjct: 51  ----AEISKESR---HD----LPIGEYLIAPQMFENIYLGETFTFYVNVVNESESNVVNV 99

Query: 121 VIKAEIQTDKQRILL-LDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEG 179
            +K E+QT  QR++L        +ES +  G+   ++ H+VKE+G H L+C+  Y    G
Sbjct: 100 SLKCELQTSTQRVVLPCSVQDVTIESTKCDGQ---VISHEVKEIGQHILICSVNYKTLSG 156

Query: 180 ERKYLPQFFKFIVSNPLSVRTKVRVVKVGATHFQEITFLEACIENHTKSNLYMDQVEFEP 239
           E  Y  +FFKF VS P+ V+TK    +  A   Q++ +LEA IEN + SN+++++VE +P
Sbjct: 157 ENMYFRKFFKFPVSKPIDVKTKFYSAEDNAN--QDV-YLEAQIENTSNSNMFLERVELDP 213

Query: 240 SQNWSATMLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQG 299
           SQ++  T +     H D   +  ++ KP         I  +L+ L        SPV V  
Sbjct: 214 SQHYKVTSIS----HEDEFPEVGKLLKP-------KDIRQFLFCL--------SPVDVNN 254

Query: 300 S------NVLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFL 353
           +        +GKL ++WRT++GE GRLQT  +        ++ L+V + P+ V + KPF 
Sbjct: 255 TLGYKDLTSIGKLDMSWRTSMGEKGRLQTSALQRIAPGYGDVRLSVEKTPACVDVQKPFE 314

Query: 354 LKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATK 413
           +  +L N +++     ++ L Q  + +  +   +G+ +  L P       DF LN+    
Sbjct: 315 VACRLYNCSERALD-LQLRLEQPSNRQLVICSPSGVSLGQLPPSRY---VDFALNVFPVA 370

Query: 414 LGVQRITGITVFDKLEKITYDSLPDLEIFV 443
           +G+Q I+GI + D   K  Y+     +IFV
Sbjct: 371 VGIQSISGIRITDTFTKRHYEHDDIAQIFV 400

Caenorhabditis briggsae (taxid: 6238)

>sp|Q95QQ2|U533_CAEEL UPF0533 protein C56C10.7 OS=Caenorhabditis elegans GN=C56C10.7 PE=1 SV=1

 Score =  189 bits (481), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 135/453 (29%), Positives = 221/453 (48%), Gaps = 63/453 (13%)

Query: 1   MSSTPGTHS----LAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLIS 56
           M+  P + S    LA RVMRL RP        +  P D F       DP+  +    L++
Sbjct: 1   MADNPASSSSQQLLALRVMRLARP--------KFAPVDGFS-----HDPVDPTGFGELLA 47

Query: 57  SDVTTNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLE 116
             V     S+++  SR         + +   L+ PQ F  IYLGETF  Y+++ N S   
Sbjct: 48  GKV-----SEISKESR-------QDLPIGEYLIAPQMFENIYLGETFTFYVNVVNESEKT 95

Query: 117 VRDVVIKAEIQTDKQRILL-LDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYS 175
           V  V +K E+QT  QR++L      + +ES +  G+   ++ H+VKE+G H L+C+  Y 
Sbjct: 96  VSSVSLKCELQTSTQRVVLPCSVQDATIESSKCEGQ---VISHEVKEIGQHILICSVNYK 152

Query: 176 DGEGERKYLPQFFKFIVSNPLSVRTKVRVVKVGATHFQEITFLEACIENHTKSNLYMDQV 235
              GE  Y  +FFKF VS P+ V+TK    +  A   Q++ +LEA IEN + +N+++++V
Sbjct: 153 TSNGENMYFRKFFKFPVSKPIDVKTKFYSAEDNAN--QDV-YLEAQIENTSNANMFLEKV 209

Query: 236 EFEPSQNWSATMLKADGPHSDYNAQSREIFKPP-----VLIRSGGGIHNYLYQLKMLSHG 290
           E +PSQ+++ T +     H D      ++ KP      +   +   +HN L    + S  
Sbjct: 210 ELDPSQHYNVTSIA----HEDEFGDVGKLLKPKDIRQFLFCLTPADVHNTLGYKDLTS-- 263

Query: 291 SSSPVKVQGSNVLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDK 350
                       +GKL ++WRT++GE GRLQT  +        ++ L+V + P+ V + K
Sbjct: 264 ------------IGKLDMSWRTSMGEKGRLQTSALQRIAPGYGDVRLSVEKTPACVDVQK 311

Query: 351 PFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLI 410
           PF +  +L N +++     ++ L Q  +        +G+ +  L P +     DF LN+ 
Sbjct: 312 PFEVSCRLYNCSERALD-LQLRLEQPSNRHLVFCSPSGVSLGQLPPSQ---HVDFSLNVF 367

Query: 411 ATKLGVQRITGITVFDKLEKITYDSLPDLEIFV 443
              +G+Q I+GI + D   K  Y+     +IFV
Sbjct: 368 PVTVGIQSISGIRITDTFTKRIYEHDDIAQIFV 400

Caenorhabditis elegans (taxid: 6239)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	446
255556003	434	expressed protein, putative [Ricinus com	0.970	0.997	0.760	0.0
225470348	438	PREDICTED: UPF0533 protein C5orf44 [Viti	0.977	0.995	0.763	0.0
356548745	440	PREDICTED: UPF0533 protein C5orf44 homol	0.961	0.975	0.747	0.0
449457717	440	PREDICTED: UPF0533 protein C5orf44-like	0.979	0.993	0.712	0.0
224079249	450	predicted protein [Populus trichocarpa]	0.964	0.955	0.733	0.0
356521339	435	PREDICTED: UPF0533 protein C5orf44-like	0.952	0.977	0.731	0.0
388496064	437	unknown [Medicago truncatula]	0.950	0.970	0.715	1e-180
358346667	446	hypothetical protein MTR_084s0010 [Medic	0.950	0.950	0.700	1e-178
18407493	442	uncharacterized protein [Arabidopsis tha	0.975	0.984	0.668	1e-168
297824907	443	hypothetical protein ARALYDRAFT_483987 [	0.970	0.977	0.667	1e-167

>gi|255556003|ref|XP_002519036.1| expressed protein, putative [Ricinus communis] gi|223541699|gb|EEF43247.1| expressed protein, putative [Ricinus communis]

 Score =  697 bits (1799), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/447 (76%), Positives = 384/447 (85%), Gaps = 14/447 (3%)

Query: 1   MSSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVT 60
           MS+TPGTHSLAFRVMRLCRPS HV+  L VDP+DL +GEDIFDDP+AAS LPPLI S +T
Sbjct: 1   MSTTPGTHSLAFRVMRLCRPSFHVDAQLLVDPSDLIVGEDIFDDPVAASRLPPLIDSHIT 60

Query: 61  T-NKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRD 119
               +SDL+YR+RFL    +DS GL+GLLVLPQAFGAIYLGETFCSYISINNSS  EVRD
Sbjct: 61  KLTDTSDLSYRTRFLHQHPSDSFGLTGLLVLPQAFGAIYLGETFCSYISINNSSNFEVRD 120

Query: 120 VVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEG 179
           V+IKAEIQT++QRILLLDTSK+PVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDG+G
Sbjct: 121 VIIKAEIQTERQRILLLDTSKNPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGDG 180

Query: 180 ERKYLPQFFKFIVSNPLSVRTKVRVVKVGATHFQEITFLEACIENHTKSNLYMDQVEFEP 239
           ERKYLPQFFKFIV+NPLSVRTKVRVVK       E T+LEACIENHTK+NLYMDQVEFEP
Sbjct: 181 ERKYLPQFFKFIVANPLSVRTKVRVVK-------ETTYLEACIENHTKTNLYMDQVEFEP 233

Query: 240 SQNWSATMLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQG 299
           +Q+WSA ++K D   S+ ++ +REIFKPPVLIRSGGGIHNYLYQL++ +HG++       
Sbjct: 234 AQHWSAKIIKDDEKQSEKDSLTREIFKPPVLIRSGGGIHNYLYQLRLSAHGAAQ------ 287

Query: 300 SNVLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLT 359
           SNVLGKLQITWRTNLGEPGRLQTQQILGT IT KEIEL + +VP+V+ +DKPF + LKLT
Sbjct: 288 SNVLGKLQITWRTNLGEPGRLQTQQILGTPITRKEIELCIAKVPAVINLDKPFSVHLKLT 347

Query: 360 NQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRI 419
           N TDKE GPFE+WLSQ+ S EEK V INGL+ M L+ +EAFG+TDFHLNLIATKLGVQRI
Sbjct: 348 NHTDKELGPFEVWLSQDGSVEEKAVTINGLQTMELSQLEAFGTTDFHLNLIATKLGVQRI 407

Query: 420 TGITVFDKLEKITYDSLPDLEIFVDQD 446
           TGITVFDK EK TYD LPDLEIFV  D
Sbjct: 408 TGITVFDKSEKKTYDPLPDLEIFVAID 434

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225470348|ref|XP_002269604.1| PREDICTED: UPF0533 protein C5orf44 [Vitis vinifera] gi|296090651|emb|CBI41051.3| unnamed protein product [Vitis vinifera]

 Score =  692 bits (1787), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/444 (76%), Positives = 385/444 (86%), Gaps = 8/444 (1%)

Query: 1   MSSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVT 60
           MSS   +HSLAFRVMRLCRPS HV+ PLR+DP DL  GEDIFDDP+AAS+LP L+ +   
Sbjct: 1   MSSGQTSHSLAFRVMRLCRPSFHVDNPLRLDPADLLAGEDIFDDPLAASDLPRLLHNHTL 60

Query: 61  TNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDV 120
            +  SDLTYR+RFLL+D +D++GLSGLLVLPQ+FGAIYLGETFCSYISINNSS  EVRDV
Sbjct: 61  KSNDSDLTYRTRFLLNDPSDAMGLSGLLVLPQSFGAIYLGETFCSYISINNSSNFEVRDV 120

Query: 121 VIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGE 180
           VIKAEIQT+KQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVC+ALY+DG+GE
Sbjct: 121 VIKAEIQTEKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCSALYNDGDGE 180

Query: 181 RKYLPQFFKFIVSNPLSVRTKVRVVKVGATHFQEITFLEACIENHTKSNLYMDQVEFEPS 240
           RKYLPQFFKF+V+NPLSV+TKVR+VK       + TFLEACIENHTKSNLYMDQVEFEPS
Sbjct: 181 RKYLPQFFKFVVANPLSVKTKVRIVK-------DNTFLEACIENHTKSNLYMDQVEFEPS 233

Query: 241 QNWSATMLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGS 300
           Q+W+AT+LKA    SD ++ +REIFK P+LIRSGGGI NYLYQLK+ S GS+  +KV GS
Sbjct: 234 QHWTATVLKAGEGLSDNDSPTREIFKQPILIRSGGGIQNYLYQLKLSSQGSAQ-MKVDGS 292

Query: 301 NVLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTN 360
           NVLGKLQITWRTNLGEPGRLQTQQILG+ IT KEIEL V+EVPSV  +++PFL+ L LTN
Sbjct: 293 NVLGKLQITWRTNLGEPGRLQTQQILGSPITRKEIELQVMEVPSVTILERPFLVHLNLTN 352

Query: 361 QTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRIT 420
           QTD+  GPFE+WLSQ+DS EE+VVM+NGLR MAL  VEAF STDF LNLIATKLGVQ+IT
Sbjct: 353 QTDRTMGPFEVWLSQSDSREEQVVMVNGLRAMALPQVEAFCSTDFRLNLIATKLGVQKIT 412

Query: 421 GITVFDKLEKITYDSLPDLEIFVD 444
           GITVFD  EK TY+ LPDLEIFVD
Sbjct: 413 GITVFDIREKRTYEPLPDLEIFVD 436

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356548745|ref|XP_003542760.1| PREDICTED: UPF0533 protein C5orf44 homolog [Glycine max]

 Score =  670 bits (1729), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/440 (74%), Positives = 375/440 (85%), Gaps = 11/440 (2%)

Query: 7   THSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSD 66
           +HSLAFRVMRLCRPS +VEPPLR+DPTDLF+GED+FDDP A    P   SS    +  SD
Sbjct: 12  SHSLAFRVMRLCRPSFNVEPPLRLDPTDLFVGEDLFDDPAAK---PHSFSSAAAHDDDSD 68

Query: 67  LTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEI 126
             YR+RFLL   +D++GLSGLLVLPQ+FGAIYLGETFCSYISINNSS  EVR+V+IKAEI
Sbjct: 69  PNYRNRFLLRHFSDAMGLSGLLVLPQSFGAIYLGETFCSYISINNSSNFEVREVLIKAEI 128

Query: 127 QTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQ 186
           QT++QRILLLDTSKSPVE+IRAGGRYDFIVEHDVKELG HTLVCTALY+DG+GERKYLPQ
Sbjct: 129 QTERQRILLLDTSKSPVETIRAGGRYDFIVEHDVKELGPHTLVCTALYNDGDGERKYLPQ 188

Query: 187 FFKFIVSNPLSVRTKVRVVKVGATHFQEITFLEACIENHTKSNLYMDQVEFEPSQNWSAT 246
           FFKFIV+NPLSVRTKVRV+K       E TFLEACIENHTKSNL+MDQV+FEP+Q +SAT
Sbjct: 189 FFKFIVANPLSVRTKVRVIK-------ETTFLEACIENHTKSNLFMDQVDFEPAQYYSAT 241

Query: 247 MLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKL 306
           +LK DG HS+ ++ +REIFKPP+LIRSGGGI+NYLYQLK LS GS    KV+GSNVLGKL
Sbjct: 242 ILKGDGHHSEKDSPTREIFKPPILIRSGGGIYNYLYQLKTLSDGSPQ-TKVEGSNVLGKL 300

Query: 307 QITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQ 366
           QITWRTNLGEPGRLQTQQILGT  T KEIEL VVEVPS++ + KPF+LKL LTNQTD+E 
Sbjct: 301 QITWRTNLGEPGRLQTQQILGTPATKKEIELQVVEVPSIINLQKPFMLKLNLTNQTDREL 360

Query: 367 GPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFD 426
           GPFE+ LSQN S  E+VVMINGL+ M L+ V+A GST+FHLNLIATK G+QRITGITVFD
Sbjct: 361 GPFEVGLSQNVSYGERVVMINGLQSMVLSEVQALGSTNFHLNLIATKPGIQRITGITVFD 420

Query: 427 KLEKITYDSLPDLEIFVDQD 446
             E  +Y+ LPDLEIFVD D
Sbjct: 421 TREMKSYEPLPDLEIFVDMD 440

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449457717|ref|XP_004146594.1| PREDICTED: UPF0533 protein C5orf44-like [Cucumis sativus]

 Score =  663 bits (1710), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/445 (71%), Positives = 384/445 (86%), Gaps = 8/445 (1%)

Query: 1   MSSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVT 60
           MS+  G+HSLAFRVMRLCRPS  V+PPLR+DP DL +GEDI DDP+AA+ LP L++  ++
Sbjct: 1   MSNAQGSHSLAFRVMRLCRPSFQVDPPLRLDPVDLLVGEDILDDPVAANQLPRLLAPQLS 60

Query: 61  TNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDV 120
            +  SDL+Y SRFLLHDS+D++GL+GLLVLPQAFGAIYLGETFCSYIS+NNSS  EVRDV
Sbjct: 61  DDSDSDLSYSSRFLLHDSSDAMGLNGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120

Query: 121 VIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGE 180
           +IKAEIQT++QRILLLD+SKSPVE+IRAGGRYDFIVEHDVKELGAHTLVCTALY+DG+GE
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGE 180

Query: 181 RKYLPQFFKFIVSNPLSVRTKVRVVKVGATHFQEITFLEACIENHTKSNLYMDQVEFEPS 240
           RKYLPQFFKF+V+NPLSVRTKVRVVK       + TFLEACIENHTKSNL+MDQV+FEPS
Sbjct: 181 RKYLPQFFKFMVANPLSVRTKVRVVK-------DSTFLEACIENHTKSNLFMDQVDFEPS 233

Query: 241 QNWSATMLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGS 300
            NW+A ++ AD  HS++ + +RE+FKPPVL+RSGGGIHN+LYQLK  ++G SSP+KV+GS
Sbjct: 234 PNWNAVIINADEHHSEHKSTTREVFKPPVLVRSGGGIHNFLYQLKCSTNGPSSPLKVEGS 293

Query: 301 NVLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTN 360
           N+LGKLQITWRTN+GEPGRLQTQQILG+ IT KE+ELNVVE+P V+ +++PF L ++LT 
Sbjct: 294 NILGKLQITWRTNMGEPGRLQTQQILGSPITRKELELNVVEMPDVIRLERPFTLHMRLTT 353

Query: 361 QTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRIT 420
           Q ++E GPFE+W+S N SDE+KVVM+NGL+ + +  VE +GSTDFHLNLIATK GVQRI 
Sbjct: 354 QIERELGPFEVWMSLNSSDEDKVVMVNGLQKVVIPRVEPYGSTDFHLNLIATKPGVQRIA 413

Query: 421 GITVFDKLEKITYDS-LPDLEIFVD 444
           GI VFD  EK  Y+   PDLEI+VD
Sbjct: 414 GIKVFDTREKKAYEHPSPDLEIYVD 438

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224079249|ref|XP_002305809.1| predicted protein [Populus trichocarpa] gi|222848773|gb|EEE86320.1| predicted protein [Populus trichocarpa]

 Score =  659 bits (1700), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/442 (73%), Positives = 374/442 (84%), Gaps = 12/442 (2%)

Query: 1   MSSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVT 60
           MS+ P T SLAFRVMRLCRPS HV+ PL +DP+DL +GEDIFDDP+AA++LPPLI + +T
Sbjct: 1   MSTPPATQSLAFRVMRLCRPSFHVDTPLLLDPSDLILGEDIFDDPLAATHLPPLIDTHLT 60

Query: 61  TN-KSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRD 119
               SSDL+YRSRFLL + +DS GLSGLLVLPQ+FGAIYLGETFCSY+SINNSS  EVRD
Sbjct: 61  NPIDSSDLSYRSRFLLQNPSDSFGLSGLLVLPQSFGAIYLGETFCSYVSINNSSNFEVRD 120

Query: 120 VVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEG 179
           +VIKAE+QT++QRILLLDTSK+PVESIRA GRYDFIVEHDVKELGAHTLVCTALY+DG+G
Sbjct: 121 IVIKAEMQTERQRILLLDTSKTPVESIRASGRYDFIVEHDVKELGAHTLVCTALYTDGDG 180

Query: 180 ERKYLPQFFKFIVSNPLSVRTKVRVVKVGATHFQEITFLEACIENHTKSNLYMDQVEFEP 239
           ERKYLPQFFKFIV+NPLSVRTKV ++ V     QE T+LEACIENHTK+NLYMDQVEFEP
Sbjct: 181 ERKYLPQFFKFIVANPLSVRTKVLLLLVS----QETTYLEACIENHTKTNLYMDQVEFEP 236

Query: 240 SQNWSATMLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQG 299
           + NWSA +LKAD   S  N+ SR     P L++SGGGI NYLYQL + SHGS+       
Sbjct: 237 APNWSAKILKADEHKSKDNSPSR-CGNIPFLVKSGGGIRNYLYQLSLSSHGSAE------ 289

Query: 300 SNVLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLT 359
           SNVLGKLQITWRTNLGEPGRLQTQQILGT IT KEIEL+V EVPS + +D+PFL+ L LT
Sbjct: 290 SNVLGKLQITWRTNLGEPGRLQTQQILGTPITPKEIELHVAEVPSAINLDRPFLVHLNLT 349

Query: 360 NQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRI 419
           NQTD+E GPFE+WLSQ+D+ +EK VMINGL+ M L+ +EAFGSTDF+LNLIATKLGVQ+I
Sbjct: 350 NQTDRELGPFEVWLSQDDTLDEKTVMINGLQTMELSQLEAFGSTDFYLNLIATKLGVQKI 409

Query: 420 TGITVFDKLEKITYDSLPDLEI 441
           TGITVFDK EK TY  LPDLE+
Sbjct: 410 TGITVFDKSEKKTYAPLPDLEV 431

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356521339|ref|XP_003529314.1| PREDICTED: UPF0533 protein C5orf44-like [Glycine max]

 Score =  649 bits (1673), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/440 (73%), Positives = 369/440 (83%), Gaps = 15/440 (3%)

Query: 7   THSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSD 66
           +HSLAFRVMRLCRPS +VEPPLR+DP DLF GED+FDDP A    PP  SS   ++ +  
Sbjct: 11  SHSLAFRVMRLCRPSFNVEPPLRLDPADLFAGEDLFDDPAAN---PPSFSSSDDSDSN-- 65

Query: 67  LTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEI 126
             YR+RFLL   +D++GLSGLLVLPQ+FGAIYLGETFCSYISINNSS  EVRDV+IKAEI
Sbjct: 66  --YRNRFLLRHFSDAMGLSGLLVLPQSFGAIYLGETFCSYISINNSSNFEVRDVIIKAEI 123

Query: 127 QTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQ 186
           QT++ RILLLDTSKSPVE+IRAGGRYDFIVEHDVKELG HTLVCTALY+DG+GERKYLPQ
Sbjct: 124 QTERLRILLLDTSKSPVETIRAGGRYDFIVEHDVKELGPHTLVCTALYNDGDGERKYLPQ 183

Query: 187 FFKFIVSNPLSVRTKVRVVKVGATHFQEITFLEACIENHTKSNLYMDQVEFEPSQNWSAT 246
           FFKFIV+NPLSVRTKVRV+K       E TFLEACIENHTKSNL+MDQV+FEP+Q +SA+
Sbjct: 184 FFKFIVANPLSVRTKVRVIK-------ETTFLEACIENHTKSNLFMDQVDFEPAQYYSAS 236

Query: 247 MLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKL 306
           +LK DG HS+ ++ +RE FKPP+LIRSGGGI+NYLYQLK  S G     KV+GSNVLGKL
Sbjct: 237 ILKGDGHHSEKDSPTRETFKPPILIRSGGGIYNYLYQLKTSSDGLPQ-TKVEGSNVLGKL 295

Query: 307 QITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQ 366
           QITWRTNLGEPGRLQTQQILGTT T KEIEL VVEVPS++ +  PF+LKL LTNQTD+E 
Sbjct: 296 QITWRTNLGEPGRLQTQQILGTTATKKEIELQVVEVPSIINLQNPFMLKLNLTNQTDREL 355

Query: 367 GPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFD 426
           GPFE+ LSQN S  E+ VMINGL+ M L+ V+A GST+FHLNLIATK G+QRITGITVFD
Sbjct: 356 GPFEVSLSQNVSYGERAVMINGLQSMVLSEVQALGSTNFHLNLIATKPGIQRITGITVFD 415

Query: 427 KLEKITYDSLPDLEIFVDQD 446
             E  +Y+ LPDLEIFVD D
Sbjct: 416 TREMKSYEPLPDLEIFVDMD 435

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388496064|gb|AFK36098.1| unknown [Medicago truncatula]

 Score =  638 bits (1645), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 314/439 (71%), Positives = 366/439 (83%), Gaps = 15/439 (3%)

Query: 8   HSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDL 67
           HS+AFRVMRLCRPS +V+PPLR+DP DLF+GED FDDP A S      SSD+     SD 
Sbjct: 14  HSVAFRVMRLCRPSFNVDPPLRIDPDDLFVGEDHFDDPSAPS------SSDLIA-PDSDP 66

Query: 68  TYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQ 127
            YR+RFLL   +DS+GLSGLLVLPQ+FGAIYLGETFCSYISINNSS  EVR+V+IKAEIQ
Sbjct: 67  NYRNRFLLQHFSDSMGLSGLLVLPQSFGAIYLGETFCSYISINNSSNFEVREVIIKAEIQ 126

Query: 128 TDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQF 187
           T++QRILLLDTSKSPVE+IRAGGRYDFIVEHDVKELG HTLVCTALY+DG+GERKYLPQF
Sbjct: 127 TERQRILLLDTSKSPVETIRAGGRYDFIVEHDVKELGPHTLVCTALYNDGDGERKYLPQF 186

Query: 188 FKFIVSNPLSVRTKVRVVKVGATHFQEITFLEACIENHTKSNLYMDQVEFEPSQNWSATM 247
           FKFIV+NPLSVRTKVRV+K       E TFLEACIENHTKSNL+MDQV+FEP+Q++SAT+
Sbjct: 187 FKFIVANPLSVRTKVRVIK-------ETTFLEACIENHTKSNLFMDQVDFEPAQHYSATI 239

Query: 248 LKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQ 307
           L+ DGPH++ +  +RE FKPP+LIRSGGGI+NYLYQLK  S   S+  KV+G+NVLGKLQ
Sbjct: 240 LRGDGPHTEKDNTARETFKPPILIRSGGGIYNYLYQLKS-SLDDSAQTKVEGNNVLGKLQ 298

Query: 308 ITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQG 367
           ITWRTNLGEPGRLQTQQILGT  T KEIEL VVEVPS++ + +PF LKL LTN T++E G
Sbjct: 299 ITWRTNLGEPGRLQTQQILGTPTTKKEIELQVVEVPSIINLQRPFTLKLNLTNLTERELG 358

Query: 368 PFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFDK 427
           PF++ +SQN S  E  VMINGL+ M L+ +EA GST+ HLNLIATK G+Q+ITGITVFD 
Sbjct: 359 PFKVSVSQNGSSGETAVMINGLQSMVLSQIEALGSTNIHLNLIATKPGIQKITGITVFDT 418

Query: 428 LEKITYDSLPDLEIFVDQD 446
               +Y+ LPDLEIFVD D
Sbjct: 419 RGMKSYEPLPDLEIFVDID 437

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358346667|ref|XP_003637387.1| hypothetical protein MTR_084s0010 [Medicago truncatula] gi|355503322|gb|AES84525.1| hypothetical protein MTR_084s0010 [Medicago truncatula]

 Score =  629 bits (1623), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 314/448 (70%), Positives = 366/448 (81%), Gaps = 24/448 (5%)

Query: 8   HSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDL 67
           HS+AFRVMRLCRPS +V+PPLR+DP DLF+GED FDDP A S      SSD+     SD 
Sbjct: 14  HSVAFRVMRLCRPSFNVDPPLRIDPDDLFVGEDHFDDPSAPS------SSDLIA-PDSDP 66

Query: 68  TYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQ 127
            YR+RFLL   +DS+GLSGLLVLPQ+FGAIYLGETFCSYISINNSS  EVR+V+IKAEIQ
Sbjct: 67  NYRNRFLLQHFSDSMGLSGLLVLPQSFGAIYLGETFCSYISINNSSNFEVREVIIKAEIQ 126

Query: 128 TDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQF 187
           T++QRILLLDTSKSPVE+IRAGGRYDFIVEHDVKELG HTLVCTALY+DG+GERKYLPQF
Sbjct: 127 TERQRILLLDTSKSPVETIRAGGRYDFIVEHDVKELGPHTLVCTALYNDGDGERKYLPQF 186

Query: 188 FKFIVSNPLSVRTKVRVVKVGATHFQEITFLEACIENHTKSNLYMDQVEFEPSQNWSATM 247
           FKFIV+NPLSVRTKVRV+K       E TFLEACIENHTKSNL+MDQV+FEP+Q++SAT+
Sbjct: 187 FKFIVANPLSVRTKVRVIK-------ETTFLEACIENHTKSNLFMDQVDFEPAQHYSATI 239

Query: 248 LKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQ 307
           L+ DGPH++ +  +RE FKPP+LIRSGGGI+NYLYQLK  S   S+  KV+G+NVLGKLQ
Sbjct: 240 LRGDGPHTEKDNTARETFKPPILIRSGGGIYNYLYQLKS-SLDDSAQTKVEGNNVLGKLQ 298

Query: 308 ITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQG 367
           ITWRTNLGEPGRLQTQQILGT  T KEIEL VVEVPS++ + +PF LKL LTN T++E G
Sbjct: 299 ITWRTNLGEPGRLQTQQILGTPTTKKEIELQVVEVPSIINLQRPFTLKLNLTNLTERELG 358

Query: 368 PFEIWLSQNDSDEEKVVMINGLRIM---------ALAPVEAFGSTDFHLNLIATKLGVQR 418
           PF++ +SQN S  E  VMINGL+ M          L+ +EA GST+ HLNLIATK G+Q+
Sbjct: 359 PFKVSVSQNGSSGETAVMINGLQSMVMHSLWIISVLSQIEALGSTNIHLNLIATKPGIQK 418

Query: 419 ITGITVFDKLEKITYDSLPDLEIFVDQD 446
           ITGITVFD     +Y+ LPDLEIFVD D
Sbjct: 419 ITGITVFDTRGMKSYEPLPDLEIFVDID 446

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18407493|ref|NP_566117.1| uncharacterized protein [Arabidopsis thaliana] gi|16226796|gb|AAL16264.1|AF428334_1 At2g47960/T9J23.10 [Arabidopsis thaliana] gi|18377797|gb|AAL67048.1| unknown protein [Arabidopsis thaliana] gi|20197311|gb|AAC63650.2| expressed protein [Arabidopsis thaliana] gi|20197565|gb|AAM15133.1| expressed protein [Arabidopsis thaliana] gi|21281259|gb|AAM45021.1| unknown protein [Arabidopsis thaliana] gi|330255823|gb|AEC10917.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  598 bits (1543), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 299/447 (66%), Positives = 353/447 (78%), Gaps = 12/447 (2%)

Query: 2   SSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTT 61
           + T G HSLAFRVMRLC+PS HV+PPLR+DP DL  GED  DDP +AS     +SS    
Sbjct: 6   TQTHGPHSLAFRVMRLCKPSFHVDPPLRIDPFDLLAGEDFSDDPSSASLFRRHVSSADAV 65

Query: 62  NKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVV 121
           +  SDL+YR+RFLL+   D IGLSGLL+LPQ+FGAIYLGETFCSYIS+NNSST EVRDV 
Sbjct: 66  D--SDLSYRNRFLLNHPTDPIGLSGLLLLPQSFGAIYLGETFCSYISVNNSSTSEVRDVT 123

Query: 122 IKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGER 181
           IKAEIQT++QRILLLDTSKSPVESIR GGRYDFIVEHDVKELGAHTLVC+ALY+D +GER
Sbjct: 124 IKAEIQTERQRILLLDTSKSPVESIRTGGRYDFIVEHDVKELGAHTLVCSALYNDADGER 183

Query: 182 KYLPQFFKFIVSNPLSVRTKVRVVKVGATHFQEITFLEACIENHTKSNLYMDQVEFEPSQ 241
           KYLPQFFKF+V+NPLSVRTKVRVVK       E TFLEACIENHTK+NL+MDQV+FEP++
Sbjct: 184 KYLPQFFKFVVANPLSVRTKVRVVK-------ETTFLEACIENHTKANLFMDQVDFEPAK 236

Query: 242 NWSATMLKADGPHSD--YNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQG 299
            WSA  L+ +    D   +  S  I KPPV+IRSGGGIHNYLY+L   S   S   K QG
Sbjct: 237 QWSAVRLQNEDSTEDPPTSGLSGLIPKPPVIIRSGGGIHNYLYKLNP-SADVSGQTKFQG 295

Query: 300 SNVLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLT 359
           SN+LGK QITWRTNLGEPGRLQTQQILG  ++ KEI + VVEVP+V+ +++PF   L LT
Sbjct: 296 SNILGKFQITWRTNLGEPGRLQTQQILGAPVSRKEINMRVVEVPAVIHLNRPFRAYLNLT 355

Query: 360 NQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRI 419
           NQTD++ GPFE+ LSQ+++  EK V INGL+ + L  +EAFGS DF LNLIA+KLGVQ+I
Sbjct: 356 NQTDRQLGPFEVSLSQDETQLEKPVGINGLQTLMLPRIEAFGSNDFQLNLIASKLGVQKI 415

Query: 420 TGITVFDKLEKITYDSLPDLEIFVDQD 446
            GIT  D  EK TY+ +PD+EIFV+ D
Sbjct: 416 AGITALDTREKKTYELVPDMEIFVETD 442

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297824907|ref|XP_002880336.1| hypothetical protein ARALYDRAFT_483987 [Arabidopsis lyrata subsp. lyrata] gi|297326175|gb|EFH56595.1| hypothetical protein ARALYDRAFT_483987 [Arabidopsis lyrata subsp. lyrata]

 Score =  594 bits (1531), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 297/445 (66%), Positives = 352/445 (79%), Gaps = 12/445 (2%)

Query: 1   MSSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVT 60
           MS+T G HSLAFRVMRLC+PS HV+PPLR+DP DL  GED  DDP +AS     +SS   
Sbjct: 1   MSATHGPHSLAFRVMRLCKPSFHVDPPLRIDPFDLLAGEDFSDDPSSASLFRRHVSSADA 60

Query: 61  TNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDV 120
            +  SDL+YR+RFLL+   D IGLSGLL+LPQ+FGAIYLGETFCSYIS+NNSST EVRDV
Sbjct: 61  VD--SDLSYRNRFLLNHPTDPIGLSGLLLLPQSFGAIYLGETFCSYISVNNSSTSEVRDV 118

Query: 121 VIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGE 180
            IKAEIQT++QRILLLDTSKSPVESIR GGRYDFIVEHDVKELGAHTLVC+ALY+D +GE
Sbjct: 119 TIKAEIQTERQRILLLDTSKSPVESIRTGGRYDFIVEHDVKELGAHTLVCSALYNDADGE 178

Query: 181 RKYLPQFFKFIVSNPLSVRTKVRVVKVGATHFQEITFLEACIENHTKSNLYMDQVEFEPS 240
           RKYLPQFFKF+V+NPLSVRTKVRVVK       E TFLEACIENHTK+NL+MDQV+FEP+
Sbjct: 179 RKYLPQFFKFVVANPLSVRTKVRVVK-------ETTFLEACIENHTKANLFMDQVDFEPA 231

Query: 241 QNWSATMLKADGPHSD--YNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQ 298
           + WSA  L+ +    D   +  S  I KPPV+IRSGGGIHNYLY+L   S   S   K Q
Sbjct: 232 KQWSAVRLQNEDSTEDPPTSGLSGLIPKPPVIIRSGGGIHNYLYKLNP-SADVSGQTKFQ 290

Query: 299 GSNVLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKL 358
           GSN+LGK QITWRTNLGEPGRLQTQQILG  ++ KEI + V EVP+V+ +++PF   L L
Sbjct: 291 GSNILGKFQITWRTNLGEPGRLQTQQILGAPVSRKEINMRVAEVPAVIHLNRPFPAYLNL 350

Query: 359 TNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQR 418
           TNQTD++ GPFE+ LSQ++S  EK V INGL+ + L  +EAFGS DF LNLIA+KLGVQ+
Sbjct: 351 TNQTDRQLGPFEVSLSQDESQMEKPVGINGLQTLMLPRIEAFGSNDFQLNLIASKLGVQK 410

Query: 419 ITGITVFDKLEKITYDSLPDLEIFV 443
           I+GIT  D  EK TY+ +P++E+ V
Sbjct: 411 ISGITALDTREKKTYELVPEMEVSV 435

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	446
TAIR|locus:2043433	442	AT2G47960 "AT2G47960" [Arabido	0.975	0.984	0.651	9e-148
MGI|MGI:1914225	417	Trappc13 "trafficking protein	0.771	0.824	0.322	1.6e-49
ZFIN|ZDB-GENE-030131-9775	412	trappc13 "trafficking protein	0.612	0.662	0.364	2.3e-48
DICTYBASE|DDB_G0269062	511	DDB_G0269062 "DUF974 family pr	0.526	0.459	0.338	9.7e-46
FB|FBgn0032204	438	CG4953 [Drosophila melanogaste	0.605	0.616	0.337	2.2e-40
UNIPROTKB|G4NC96	339	MGG_01105 "Uncharacterized pro	0.213	0.280	0.324	0.00052

TAIR|locus:2043433 AT2G47960 "AT2G47960" [Arabidopsis thaliana (taxid:3702)]

 Score = 1443 (513.0 bits), Expect = 9.0e-148, P = 9.0e-148
 Identities = 291/447 (65%), Positives = 343/447 (76%)

Query:     2 SSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTT 61
             + T G HSLAFRVMRLC+PS HV+PPLR+DP DL  GED  DDP +AS     +SS    
Sbjct:     6 TQTHGPHSLAFRVMRLCKPSFHVDPPLRIDPFDLLAGEDFSDDPSSASLFRRHVSSADAV 65

Query:    62 NKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVV 121
             +  SDL+YR+RFLL+   D IGLSGLL+LPQ+FGAIYLGETFCSYIS+NNSST EVRDV 
Sbjct:    66 D--SDLSYRNRFLLNHPTDPIGLSGLLLLPQSFGAIYLGETFCSYISVNNSSTSEVRDVT 123

Query:   122 IKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGER 181
             IKAEIQT++QRILLLDTSKSPVESIR GGRYDFIVEHDVKELGAHTLVC+ALY+D +GER
Sbjct:   124 IKAEIQTERQRILLLDTSKSPVESIRTGGRYDFIVEHDVKELGAHTLVCSALYNDADGER 183

Query:   182 KYLPQFFKFIVSNPLSVRTKVRVVKVGATHFQEITFLEACIENHTKSNLYMDQVEFEPSQ 241
             KYLPQFFKF+V+NPLSVRTKVRVVK       E TFLEACIENHTK+NL+MDQV+FEP++
Sbjct:   184 KYLPQFFKFVVANPLSVRTKVRVVK-------ETTFLEACIENHTKANLFMDQVDFEPAK 236

Query:   242 NWSATMLKADGPHSD--YNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQG 299
              WSA  L+ +    D   +  S  I KPPV+IRSGGGIHNYLY+L   S   S   K QG
Sbjct:   237 QWSAVRLQNEDSTEDPPTSGLSGLIPKPPVIIRSGGGIHNYLYKLNP-SADVSGQTKFQG 295

Query:   300 SNVLGKLQITWRTNLGEPGRXXXXXXXXXXXXSKEIELNVVEVPSVVGIDKPFLLKLKLT 359
             SN+LGK QITWRTNLGEPGR             KEI + VVEVP+V+ +++PF   L LT
Sbjct:   296 SNILGKFQITWRTNLGEPGRLQTQQILGAPVSRKEINMRVVEVPAVIHLNRPFRAYLNLT 355

Query:   360 NQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRI 419
             NQTD++ GPFE+ LSQ+++  EK V INGL+ + L  +EAFGS DF LNLIA+KLGVQ+I
Sbjct:   356 NQTDRQLGPFEVSLSQDETQLEKPVGINGLQTLMLPRIEAFGSNDFQLNLIASKLGVQKI 415

Query:   420 TGITVFDKLEKITYDSLPDLEIFVDQD 446
              GIT  D  EK TY+ +PD+EIFV+ D
Sbjct:   416 AGITALDTREKKTYELVPDMEIFVETD 442

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0006635 "fatty acid beta-oxidation" evidence=RCA

GO:0016558 "protein import into peroxisome matrix" evidence=RCA

MGI|MGI:1914225 Trappc13 "trafficking protein particle complex 13" [Mus musculus (taxid:10090)]

 Score = 466 (169.1 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
 Identities = 116/360 (32%), Positives = 189/360 (52%)

Query:    77 DSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLL 136
             + A+ + L  +L LPQ FG I+LGETF SYIS++N S   V+D+++KA++QT  QR L L
Sbjct:    54 NGAEILMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKADLQTSSQR-LNL 112

Query:   137 DTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPL 196
               S + V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y  +FFKF V  PL
Sbjct:   113 SASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQGGEKMYFRKFFKFQVLKPL 172

Query:   197 SVRTKVRVVKVGATHFQEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGPHSD 256
              V+TK    +   +   +  FLEA I+N T S ++M++V  EPS  ++ T L +     +
Sbjct:   173 DVKTKFYNAESDLSSVTDEVFLEAQIQNITTSPMFMEKVSLEPSIMYNVTELNSVTQAGE 232

Query:   257 YNAQ--SREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTNL 314
               +   SR   +P            YLY LK     +     ++G  V+GKL I W+TNL
Sbjct:   233 CISTFGSRGYLQPM-------DTRQYLYCLKPKKEFAEKAGIIKGVTVIGKLDIVWKTNL 285

Query:   315 GEPGRXXXXXXXXXXXXSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLS 374
             GE GR              ++ L++  +P  V +++PF +  K+TN +++     ++ L 
Sbjct:   286 GERGRLQTSQLQRMAPGYGDVRLSLEAIPDTVNLEEPFHITCKITNCSERMM---DLVLE 342

Query:   375 QNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFDKLEKITYD 434
               +++      I+G ++  L P     S    L L+++  G+Q ++G+ + D   K TY+
Sbjct:   343 MCNTNSIHWCGISGRQLGKLHPSS---SLCLALTLLSSVQGLQSVSGLRLTDTFLKRTYE 399

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-030131-9775 trappc13 "trafficking protein particle complex 13" [Danio rerio (taxid:7955)]

 Score = 450 (163.5 bits), Expect = 2.3e-48, Sum P(2) = 2.3e-48
 Identities = 105/288 (36%), Positives = 160/288 (55%)

Query:    79 ADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDT 138
             A+++ L  +L LPQ FG I+LGETF SYIS++N S+  V+D+++KA++QT  QR L L  
Sbjct:    56 AETLILGEMLTLPQNFGNIFLGETFSSYISVHNDSSQVVKDILVKADLQTSSQR-LNLSA 114

Query:   139 SKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSV 198
             S S V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y  +FFKF V  PL V
Sbjct:   115 SNSAVSELKPECCIDDVIHHEVKEIGTHILVCAVSYTTQTGEKLYFRKFFKFQVLKPLDV 174

Query:   199 RTKVRVVKVGATHFQEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLK--ADGPHSD 256
             +TK    +       E+ FLEA I+N T S ++M++V  EPS  ++ T L   A G  S 
Sbjct:   175 KTKFYNAET-----DEV-FLEAQIQNITTSPMFMEKVSLEPSMMYNVTELNNVASGDESS 228

Query:   257 YNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTNLGE 316
              +   +  +  P+  R       YLY LK     +     ++G  V+GKL I W+TNLGE
Sbjct:   229 ESTFGKMSYLQPLDTRQ------YLYCLKPKPEFAEKAGVIKGVTVIGKLDIVWKTNLGE 282

Query:   317 PGRXXXXXXXXXXXXSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDK 364
              GR              ++ L++  +P  V +++PF +  K+TN +++
Sbjct:   283 RGRLQTSQLQRMAPGYGDVRLSLEFIPDTVDLEEPFDITCKITNCSER 330

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

DICTYBASE|DDB_G0269062 DDB_G0269062 "DUF974 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 358 (131.1 bits), Expect = 9.7e-46, Sum P(2) = 9.7e-46
 Identities = 86/254 (33%), Positives = 141/254 (55%)

Query:     8 HSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDL 67
             H L  +VMRL +P++    P+  +  DL    +     I +++L       V ++ S+D 
Sbjct:     5 HLLNLKVMRLSKPNIPTINPILCEKQDL--PYETMSTSIDSTSLS---MGSVNSSGSND- 58

Query:    68 TYRSRFLLHDSADSIGLSGLLV---LPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKA 124
                +  L+ ++ + I + GL V   L    G IYLGE FC YIS+NN S  +VR+V +K 
Sbjct:    59 ---NNQLIGNNGNPINMEGLGVTSMLQLQSGVIYLGEMFCCYISLNNHSPYQVRNVFLKV 115

Query:   125 EIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYL 184
             E+QT   RI LLD+ +  V +   G   DF+V+ +VKE G + LVC   Y+  EGE+K  
Sbjct:   116 ELQTTSSRIPLLDSEQQSVPTFNPGFSSDFVVQREVKESGVNILVCAVNYTTPEGEQKKF 175

Query:   185 PQFFKFIVSNPLSVRTKVRVVKVGATHFQEITFLEACIENHTKSNLYMDQVEFEPSQNWS 244
              ++FKF V NPL ++T++        +   + FLEAC+EN T+ +L+++ + FEP ++++
Sbjct:   176 RKYFKFQVLNPLVLKTRIH-------NLPNVVFLEACLENATQGSLFIESILFEPIEHFN 228

Query:   245 ATMLKADGPHSDYN 258
             +  +  +    D N
Sbjct:   229 SKDISFENSLDDNN 242

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

FB|FBgn0032204 CG4953 [Drosophila melanogaster (taxid:7227)]

 Score = 377 (137.8 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
 Identities = 97/287 (33%), Positives = 157/287 (54%)

Query:    79 ADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLL-- 136
             A+++    +L+LPQ+FG+IYLGETF SYI ++N++   V  V +KA++Q++  RI L   
Sbjct:    55 AETLAAGQVLLLPQSFGSIYLGETFASYICVHNTTPNPVECVTVKADLQSNTSRINLSMH 114

Query:   137 DTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPL 196
             + +KSPV  +  GG  D ++ ++VKE+G H LVC   YS   G  + L +FFKF V  PL
Sbjct:   115 ENAKSPVV-LPPGGTIDDVIRYEVKEIGTHILVCEVNYSTPAGYAQSLRKFFKFQVLKPL 173

Query:   197 SVRTKVRVVKVGATHFQEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGPHSD 256
              V+TK    ++      EI +LEA I+N T S   +++VE + S+++S T L    P   
Sbjct:   174 DVKTKFYNAEI-----DEI-YLEAQIQNVTTSPFCLEKVELDGSEDYSVTPLNTL-P--- 223

Query:   257 YNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTNLGE 316
              N +S  +F    +++       +LY +K     + +   ++  N +GKL I WR+NLGE
Sbjct:   224 -NGES--VFTVKHMLQPNNSCQ-FLYCIKPKGDIAKNVDTLRQFNNVGKLDIVWRSNLGE 279

Query:   317 PGRXXXXXXXXXXXXSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTD 363
              GR             K + L V++  + + I   F    ++TN ++
Sbjct:   280 KGRLQTSQLQRLPFECKTLRLEVLDAKNTIKIGTIFTFNCRVTNTSE 326

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|G4NC96 MGG_01105 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 101 (40.6 bits), Expect = 0.00052, Sum P(2) = 0.00052
 Identities = 36/111 (32%), Positives = 52/111 (46%)

Query:    80 DSIGLSGLLVLPQAFGAIYLGETFCSYISINN-----SSTLEVRDVVIKAEIQTDKQR-- 132
             D   LS +L LP +FG+ Y+GETF   +  N+     ++  +VRDV I+AE++T      
Sbjct:    65 DPFILSPILNLPPSFGSAYVGETFSCTLCANHDVPDGAAARQVRDVRIEAEMKTPGSAAG 124

Query:   133 -ILLLDTSKSPVES--------IRAGGRYDFIVEHDVKELGAHTLVCTALY 174
              +  LD   +            +R G     IV  D+KE G H L  T  Y
Sbjct:   125 VVTKLDLGPNGGGGGEGDGGVDLREGETLQRIVRFDLKEEGNHVLAVTVSY 175

GO:0005575 "cellular_component" evidence=ND

GO:0043581 "mycelium development" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q0VFT9	CE044_XENTR	No assigned EC number	0.3186	0.8565	0.9271	yes	no
Q95TN1	U533_DROME	No assigned EC number	0.3022	0.8744	0.8904	yes	no
Q5RCG0	CE044_PONAB	No assigned EC number	0.3187	0.8609	0.9208	yes	no
Q3TIR1	CE044_MOUSE	No assigned EC number	0.3170	0.8699	0.9304	yes	no
Q5M887	CE044_RAT	No assigned EC number	0.3170	0.8721	0.9306	yes	no
A7MB76	CE044_BOVIN	No assigned EC number	0.3117	0.8609	0.9208	yes	no
Q6PBY7	CE044_DANRE	No assigned EC number	0.3256	0.8497	0.9199	yes	no
A5PLN9	CE044_HUMAN	No assigned EC number	0.3163	0.8609	0.9208	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.IV.3206.1 hypothetical protein (423 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	446
pfam06159	235	pfam06159, DUF974, Protein of unknown function (DU	1e-101

>gnl|CDD|218917 pfam06159, DUF974, Protein of unknown function (DUF974)

 Score =  300 bits (771), Expect = e-101
 Identities = 115/239 (48%), Positives = 150/239 (62%), Gaps = 6/239 (2%)

Query: 88  LVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIR 147
           L LPQ+FG+IYLGETF SY+ +NN S+ EVRDV IKAE+QT  QR+ L D+  +PVE++R
Sbjct: 1   LTLPQSFGSIYLGETFSSYLCVNNESSKEVRDVSIKAELQTPSQRLNLSDSVDAPVETLR 60

Query: 148 AGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTKVRVVKV 207
            G   DF+V  DVKE G H LVCT  Y++  GE +Y  +FFKFIV NPLSVRTK   ++ 
Sbjct: 61  PGESLDFVVSFDVKEEGTHILVCTVSYTEASGETRYFRKFFKFIVKNPLSVRTKFYQLED 120

Query: 208 GATHFQEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGPHSDYNAQSREIFKP 267
            +       +LEA IEN T+ NL++++V  EPS  + AT L  +    D +     + K 
Sbjct: 121 LSR---RRVYLEAQIENITEDNLFLEKVTLEPSPGYKATSLNWEPSLGDVDGLDGGMDKR 177

Query: 268 PVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTNLGEPGRLQTQQIL 326
           PVL    G I  YL+ LK    G+   +K+ G   LGKL I WRT +GE GRLQT Q+ 
Sbjct: 178 PVL--KPGDIRQYLFCLKP-KEGALEELKLDGRTNLGKLDIVWRTAMGEKGRLQTSQLQ 233

Family of uncharacterized eukaryotic proteins. Length = 235

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	446
KOG2625	348	consensus Uncharacterized conserved protein [Funct	100.0
PF06159	249	DUF974: Protein of unknown function (DUF974); Inte	100.0
PF07919	554	Gryzun: Gryzun, putative trafficking through Golgi	99.91
KOG4386	809	consensus Uncharacterized conserved protein [Funct	99.78
PF12735	306	Trs65: TRAPP trafficking subunit Trs65; InterPro:	98.82
PF08626	1185	TRAPPC9-Trs120: Transport protein Trs120 or TRAPPC	98.34
PF12742	57	Gryzun-like: Gryzun, putative Golgi trafficking	97.72
PF12584	147	TRAPPC10: Trafficking protein particle complex sub	97.58
PF07705	101	CARDB: CARDB; InterPro: IPR011635 The APHP (acidic	96.59
PF00927	107	Transglut_C: Transglutaminase family, C-terminal i	96.53
PF10633	78	NPCBM_assoc: NPCBM-associated, NEW3 domain of alph	95.32
PF07919	554	Gryzun: Gryzun, putative trafficking through Golgi	95.03
PF14874	102	PapD-like: Flagellar-associated PapD-like	94.92
PF05753	181	TRAP_beta: Translocon-associated protein beta (TRA	93.84
PF07705	101	CARDB: CARDB; InterPro: IPR011635 The APHP (acidic	93.38
PF10633	78	NPCBM_assoc: NPCBM-associated, NEW3 domain of alph	90.47
PF05753	181	TRAP_beta: Translocon-associated protein beta (TRA	90.1
smart00809	104	Alpha_adaptinC2 Adaptin C-terminal domain. Adaptin	86.52
PF11797	140	DUF3324: Protein of unknown function C-terminal (D	86.22
PF02883	115	Alpha_adaptinC2: Adaptin C-terminal domain; InterP	84.7
PF14874	102	PapD-like: Flagellar-associated PapD-like	84.38
PF00207	92	A2M: Alpha-2-macroglobulin family; InterPro: IPR00	81.76
PF00927	107	Transglut_C: Transglutaminase family, C-terminal i	81.21

>KOG2625 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=1.3e-97  Score=687.14  Aligned_cols=348  Identities=30%  Similarity=0.533  Sum_probs=322.2

Q ss_pred             cccccccccceeecceEEEEEEEEcCCCcceEEEEEEEEEeCCCceEeccCCCCCCccccCCCCeeeEEEEEEccccCce
Q 013275           87 LLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAH  166 (446)
Q Consensus        87 ~L~LP~sfG~iylGEtFs~~i~v~N~s~~~v~~V~ikaelqT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~~~lke~G~h  166 (446)
                      +|.+||.||+|||||||+.||+|||+|++.|++|.+||||||.+||+.|... .....+++|.++.+.+|+||+||+|+|
T Consensus         1 ~l~~pq~f~niflgetfs~yinv~nds~k~v~~i~lk~dlqtssqrl~l~~s-~~~~aei~~~~c~~~vi~hevkeig~h   79 (348)
T KOG2625|consen    1 MLIAPQMFENIFLGETFSFYINVHNDSEKTVKDILLKADLQTSSQRLNLPAS-NAAAAEIEPDCCEDDVIHHEVKEIGQH   79 (348)
T ss_pred             CccchhhhcceeeccceEEEEEEecchhhhhhhheeeecccccceeeccccc-hhhhhhcCccccchhhhhHHHHhhccE
Confidence            4789999999999999999999999999999999999999999999999653 344678999999999999999999999


Q ss_pred             EEEEEEEEEcCCCceeeeceEEEEEeecCeEEEEEeEEccccccccCCeeEEEEEEEecccccEEEEeEEeeecCCceee
Q 013275          167 TLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTKVRVVKVGATHFQEITFLEACIENHTKSNLYMDQVEFEPSQNWSAT  246 (446)
Q Consensus       167 ~L~c~VsY~~~~Ge~~~frK~fkF~v~~Pl~VrtK~~~~~~~~~~~~~~~~LEaqiqN~s~~~l~le~v~Lep~~~~~~~  246 (446)
                      +|+|+|+|++++||.++|||||||+|.+|++||||||+++..-...++++||||||||+|..+|+||+|+|+|+.+|.++
T Consensus        80 ilicavny~tq~ge~myfrkffkf~v~kpidvktkfynaesdlssv~~dvfleaqien~s~a~mflekv~ldps~~ynvt  159 (348)
T KOG2625|consen   80 ILICAVNYKTQAGEKMYFRKFFKFPVLKPIDVKTKFYNAESDLSSVNDDVFLEAQIENMSNANMFLEKVELDPSIHYNVT  159 (348)
T ss_pred             EEEEEEeeeccCccchhHHhhccccccccccccceeecccccccccchhhhhhhhhhcccccchhhhhhccCchheecce
Confidence            99999999999999999999999999999999999999964444557899999999999999999999999999999999


Q ss_pred             eecCCCCCCCCCcccccccCCceEEeCCCCeeeEEEEEeecCCCCCCCccccCceeeEEEEEEEEcCCCCCceeeEEeee
Q 013275          247 MLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTNLGEPGRLQTQQIL  326 (446)
Q Consensus       247 ~ln~~~~~~~~~~~~~~~~~~~~l~~~~gd~~q~lf~l~~~~~~~~~~~~~~g~~~lGkL~I~WRs~~Ge~G~L~Ts~l~  326 (446)
                      +++.+.+.++.-++    |.... +++|.|+|||||||+|+.+..++.+-.++.+.+|||||.||++|||+|||||++||
T Consensus       160 ~i~~~~e~gdcvst----fg~~~-~lkp~d~rq~l~cl~pk~d~~~~~gi~k~lt~igkldi~wktnlgekgrlqts~lq  234 (348)
T KOG2625|consen  160 EIAHEDEAGDCVST----FGSGA-LLKPKDIRQFLFCLKPKADFAEKAGIIKDLTSIGKLDISWKTNLGEKGRLQTSALQ  234 (348)
T ss_pred             eecchhhccccccc----ccccc-ccCccchhhheeecCchHHHHHhhccccccceeeeeEEEeeccccccccchHHHHH
Confidence            99988777665433    33332 46789999999999999887656666788999999999999999999999999999


Q ss_pred             eecCcCCCeEEEEEecCceEeeCCcEEEEEEEEeCCCCCcccEEEEEeeCCCCCcceEEEecccceeecccCCCCeeEEE
Q 013275          327 GTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFH  406 (446)
Q Consensus       327 ~~~~~~~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~  406 (446)
                      |.+|+++|++|+++.+|+.|.+++||.++|+++|||+|.|| |++.+++..   ..-++|||+++++||+|.|.+...|.
T Consensus       235 riapgygdvrlsle~~p~~vdleepf~iscki~ncserald-l~l~l~~~n---nrhi~~c~~sg~qlgkl~ps~~l~~a  310 (348)
T KOG2625|consen  235 RIAPGYGDVRLSLEAIPACVDLEEPFEISCKITNCSERALD-LQLELCNPN---NRHIHFCGISGRQLGKLHPSQHLCFA  310 (348)
T ss_pred             hhcCCCCceEEEeeccccccccCCCeEEEEEEcccchhhhh-hhhhhcCCC---CceeEEeccccccccCCCCcceeeeE
Confidence            99999999999999999999999999999999999999999 999998763   35799999999999999999999999


Q ss_pred             EEEEecccceEEeCceEEEecCCCeeeccCCCeeeEee
Q 013275          407 LNLIATKLGVQRITGITVFDKLEKITYDSLPDLEIFVD  444 (446)
Q Consensus       407 L~l~pl~~Glq~isgi~l~D~~~~r~y~~~~~~~vfV~  444 (446)
                      |+++|...|+|+|+||+|+|+++||+|||+|++||||.
T Consensus       311 l~l~~~~~giqsisgiritdtf~kr~ye~ddiaqi~v~  348 (348)
T KOG2625|consen  311 LNLFPSTQGIQSISGIRITDTFLKRIYEHDDIAQICVS  348 (348)
T ss_pred             EeeccchhcceeecceEeehhhhhhhhcccchHHhhcC
Confidence            99999999999999999999999999999999999984

>PF06159 DUF974: Protein of unknown function (DUF974); InterPro: IPR010378 This is a family of uncharacterised eukaryotic proteins

Probab=100.00  E-value=2e-70  Score=532.45  Aligned_cols=241  Identities=43%  Similarity=0.679  Sum_probs=209.0

Q ss_pred             ccccccccceeecceEEEEEEEEcCCCcceEEEEEEEEEeCCCc--eEeccCCCCC--CccccCCCCeeeEEEEEEcccc
Q 013275           88 LVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQ--RILLLDTSKS--PVESIRAGGRYDFIVEHDVKEL  163 (446)
Q Consensus        88 L~LP~sfG~iylGEtFs~~i~v~N~s~~~v~~V~ikaelqT~s~--r~~L~~~~~~--~~~~L~pg~~ld~iv~~~lke~  163 (446)
                      |+||+|||+|||||||+||||+||+++++|++|.|||||||+++  |+.|.++...  ++.+|+||+++|+||+|+|||+
T Consensus         1 L~LP~sfG~iylGEtF~~~l~~~N~s~~~v~~v~ikvemqT~s~~~r~~L~~~~~~~~~~~~L~p~~~l~~iv~~~lkE~   80 (249)
T PF06159_consen    1 LTLPQSFGSIYLGETFSCYLSVNNDSNKPVRNVRIKVEMQTPSQSLRLPLSDNENSDSPVASLAPGESLDFIVSHELKEL   80 (249)
T ss_pred             CCCCcccCCEeecCCEEEEEEeecCCCCceEEeEEEEEEeCCCCCccccCCCCccccccccccCCCCeEeEEEEEEeeec
Confidence            78999999999999999999999999999999999999999999  9999876544  5678999999999999999999


Q ss_pred             CceEEEEEEEEEcC---CCceeeeceEEEEEeecCeEEEEEeEEccccc-cccCCeeEEEEEEEecccccEEEEeEEeee
Q 013275          164 GAHTLVCTALYSDG---EGERKYLPQFFKFIVSNPLSVRTKVRVVKVGA-THFQEITFLEACIENHTKSNLYMDQVEFEP  239 (446)
Q Consensus       164 G~h~L~c~VsY~~~---~Ge~~~frK~fkF~v~~Pl~VrtK~~~~~~~~-~~~~~~~~LEaqiqN~s~~~l~le~v~Lep  239 (446)
                      |+|+|+|+|+|+++   +||+|+|||+|||+|.+||+||||+++++... ...++++||||||||+|+.||+||+|+|+|
T Consensus        81 G~h~L~c~VsY~~~~~~~g~~~tfRK~ykF~v~~PL~VktK~~~~~~~~~~~~~~~~~LEaqlqN~s~~pl~Le~v~lep  160 (249)
T PF06159_consen   81 GNHTLVCTVSYTDPTETSGERRTFRKFYKFQVLNPLSVKTKVYNLEDDSSLSPRERVFLEAQLQNISSGPLFLEKVKLEP  160 (249)
T ss_pred             CceEEEEEEEEecCcccCCccceEeeeeEEeCCCCcEEEEEEEecCCccccccceeEEEEEEEEecCCCceEEEEEEeec
Confidence            99999999999999   99999999999999999999999999995211 122349999999999999999999999999


Q ss_pred             cCCceeeeecCCCCCCCCCcccccccCCceEEeCCCCeeeEEEEEeecCCCCCCCccccCceeeEEEEEEEEcCCCCCce
Q 013275          240 SQNWSATMLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTNLGEPGR  319 (446)
Q Consensus       240 ~~~~~~~~ln~~~~~~~~~~~~~~~~~~~~l~~~~gd~~q~lf~l~~~~~~~~~~~~~~g~~~lGkL~I~WRs~~Ge~G~  319 (446)
                      .++|++.++||+....+.......+......+++|+|+|||||+|+++..........+++.+||||+|.||++|||+||
T Consensus       161 ~~~~~~~~ln~~~~~~~~~~~~~~~~~~~~~~L~P~d~~qylF~l~~~~~~~~~~~~~~~~~~lGkL~I~WRs~~Ge~Gr  240 (249)
T PF06159_consen  161 SPGFKVTDLNWEPSGESSDGEFGGISSGSRPYLQPGDVRQYLFCLTPKPEGAQNDSGADGRTNLGKLDIVWRSNMGERGR  240 (249)
T ss_pred             CCCceeEecccccccccccccccccccCCcceeCCCCEEEEEEEEEECCccccccccccCcceeeEEEEEEECCCCCCce
Confidence            99999999998765433221111111122345789999999999999987443555678899999999999999999999


Q ss_pred             eeEEeeeee
Q 013275          320 LQTQQILGT  328 (446)
Q Consensus       320 L~Ts~l~~~  328 (446)
                      |||++|+|.
T Consensus       241 LqT~~L~rr  249 (249)
T PF06159_consen  241 LQTSQLQRR  249 (249)
T ss_pred             eehhhcccC
Confidence            999999873

>PF07919 Gryzun: Gryzun, putative trafficking through Golgi; InterPro: IPR012880 The proteins featured in this family are all hypothetical eukaryotic proteins of unknown function

Probab=99.91  E-value=2.2e-21  Score=208.65  Aligned_cols=320  Identities=17%  Similarity=0.210  Sum_probs=232.8

Q ss_pred             ccccccccceeecceEEEEEEEEcCCCcceEEEEEEEEEeC---------CCceEe------ccC----CCCCCccccCC
Q 013275           88 LVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQT---------DKQRIL------LLD----TSKSPVESIRA  148 (446)
Q Consensus        88 L~LP~sfG~iylGEtFs~~i~v~N~s~~~v~~V~ikaelqT---------~s~r~~------L~~----~~~~~~~~L~p  148 (446)
                      +.+|..-+-+|+||.+..-|.|.|.++.....+. .+.+..         ......      ..+    ....+++.|++
T Consensus       177 I~~~~~~~~~l~gE~~~i~i~I~n~e~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~l~~  255 (554)
T PF07919_consen  177 IKLPNHKPPALTGEFYPIPITISNNEDEEASGVL-EVRLLHPSQLGVSSEETEDLSQVNWDSDKDDEPLFLGIPLGELAP  255 (554)
T ss_pred             EEeCCCCCCeEcCCEEEEEEEEEcCCCccceeEE-EEEEecccccccccccCccceecccccccccchhccCcccccCCC
Confidence            4556788899999999999999999877655543 333330         011110      000    01234678999


Q ss_pred             CCeeeEEEEEEccccCceEEEEEEEEEc--CC--CceeeeceEEEEEeecCe----EEEEEeEEccc--cc---------
Q 013275          149 GGRYDFIVEHDVKELGAHTLVCTALYSD--GE--GERKYLPQFFKFIVSNPL----SVRTKVRVVKV--GA---------  209 (446)
Q Consensus       149 g~~ld~iv~~~lke~G~h~L~c~VsY~~--~~--Ge~~~frK~fkF~v~~Pl----~VrtK~~~~~~--~~---------  209 (446)
                      |++....++......|.+.|.++++|..  .+  +-.-+-.+.+++.+.+||    ++.++++.-+.  +.         
T Consensus       256 ~~s~~~~l~i~~~~~~~~~L~i~~~Y~l~~~~~~~~~i~~~~~~~l~~~~PF~~~y~~~~~~~~~~~~~p~~f~~~~~~~  335 (554)
T PF07919_consen  256 GSSITVTLYIRTSRPGEYELSISVSYHLDVESDPETPISKTKTVQLPVINPFEANYDFSPRFHPDPWDMPSPFDVDGSSD  335 (554)
T ss_pred             CCcEEEEEEEEeCCceeEEEEEEEEEEEecCCCCceeEEEeEEEeeeEEcCEEeeeeEEeeeccCCccCCcccccccccc
Confidence            9999999999999999999999999975  32  223344667999999999    67777776554  10         


Q ss_pred             ----------------cccCCeeEEEEEEEecccccEEEEeEEeeecCCceeeeecCCCCCCCCCcccccccCCceEEeC
Q 013275          210 ----------------THFQEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGPHSDYNAQSREIFKPPVLIRS  273 (446)
Q Consensus       210 ----------------~~~~~~~~LEaqiqN~s~~~l~le~v~Lep~~~~~~~~ln~~~~~~~~~~~~~~~~~~~~l~~~  273 (446)
                                      ...+.+++|.++++|.++++|.|++++|+...................        ......++
T Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~s~a~~~L~I~~~~l~~~~~~~~~~~~~~~~~~~~--------~~~~~~l~  407 (554)
T PF07919_consen  336 FQTLNPEPLTRDGILSVGLNQPWCLNSDIESFAPEPLEIEDISLEVLSSNGGASCDVSSEDSSS--------PESGTVLQ  407 (554)
T ss_pred             cccccccccccccccccccCCCeEEEccceecCCCceEEEEEEEEEecCCCceeeeeccccccC--------CCccceeC
Confidence                            123567899999999999999999999997655443322111100000        00112345


Q ss_pred             CCCeeeEEEEEe--ecCCCCCCCccccCceeeEEEEEEEEc-CCCCCceeeEEeeeeecCcCCCeEEEE-EecCceEeeC
Q 013275          274 GGGIHNYLYQLK--MLSHGSSSPVKVQGSNVLGKLQITWRT-NLGEPGRLQTQQILGTTITSKEIELNV-VEVPSVVGID  349 (446)
Q Consensus       274 ~gd~~q~lf~l~--~~~~~~~~~~~~~g~~~lGkL~I~WRs-~~Ge~G~L~Ts~l~~~~~~~~dl~l~v-~~~P~~v~l~  349 (446)
                      +++.+...|++.  ....   ..........+|.+.|.||| ..+..+...++.+........+.++.| +++|+...++
T Consensus       408 ~~~~~~~~f~~~~~~~~~---~~~~~~~~~~~g~~~I~WrR~~~~s~~~~~~t~l~lP~~~v~~~~~~v~~~~p~~~~~~  484 (554)
T PF07919_consen  408 PGECREDQFCLRLDVQKL---SLDDRRNVTLLGSLVIKWRRNSSNSSDPVVTTPLPLPRVNVPSSPLRVLASVPPSAIVG  484 (554)
T ss_pred             cccccccccccccccccc---ccccCccceeEEEEEEEEEECCCCCCCceEEEEeecCceEccCCCcEEEEecCCccccC
Confidence            778887777743  2111   11123446789999999999 566667777777665544555555666 6789999999


Q ss_pred             CcEEEEEEEEeCCCCCcccEEEEEeeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEecccceEEeCceEEEe
Q 013275          350 KPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFD  426 (446)
Q Consensus       350 ~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl~~Glq~isgi~l~D  426 (446)
                      .||++.|+|+|+|.+.+. +.+.|+.+     ++|+++|.+...+ .|.|+++.++.++|+|+.+|++.+|.++|.|
T Consensus       485 ~~~~l~~~I~N~T~~~~~-~~~~me~s-----~~F~fsG~k~~~~-~llP~s~~~~~y~l~pl~~G~~~lP~l~v~d  554 (554)
T PF07919_consen  485 EPFTLSYTIENPTNHFQT-FELSMEPS-----DDFMFSGPKQTTF-SLLPFSRHTVRYNLLPLVAGWWILPRLKVRD  554 (554)
T ss_pred             cEEEEEEEEECCCCccEE-EEEEEccC-----CCEEEECCCcCce-EECCCCcEEEEEEEEEccCCcEECCcEEEeC
Confidence            999999999999999998 99999776     4699999999999 5999999999999999999999999999987

The region in question is approximately 150 residues long.

>KOG4386 consensus Uncharacterized conserved protein [Function unknown]

Probab=99.78  E-value=1.2e-20  Score=192.75  Aligned_cols=317  Identities=15%  Similarity=0.132  Sum_probs=231.0

Q ss_pred             ecceEEEEEEEEcCCCcceEEEEEEEEEeCCC-----ceE--eccCC-----------CCCCccccCCCCeeeEEEEEEc
Q 013275           99 LGETFCSYISINNSSTLEVRDVVIKAEIQTDK-----QRI--LLLDT-----------SKSPVESIRAGGRYDFIVEHDV  160 (446)
Q Consensus        99 lGEtFs~~i~v~N~s~~~v~~V~ikaelqT~s-----~r~--~L~~~-----------~~~~~~~L~pg~~ld~iv~~~l  160 (446)
                      --|.++.++.+.-+....++++..||++..+.     +|-  .++..           ...+.+.+-+|+...+....++
T Consensus       446 ~~E~~~~~lki~~~kts~~~e~~~kv~~~~Ge~tsLT~rn~~k~~~~~~~~d~~~~~~k~~~a~~v~~~EQ~~Kmlyvrc  525 (809)
T KOG4386|consen  446 HVENIIGFLKIGVAKTSVKLESVEKVDCLIGEVTSLTIRNTCKSSPIHGLLDFKRKEQKHAEAAAVLFVEQELKMLYVRC  525 (809)
T ss_pred             chheEEEEEEeeechhhhhhhhhhhcCcccccccceeeecccccCCchhhhhhhhHhhccCchhhcchHHHHHHHHHHhh
Confidence            45788889999999999999999999988763     111  11110           1235667778888888888888


Q ss_pred             cccCceEEEEEEEEEcCCC--c---eeeece--EEEEEeecCeEEEEEeEEcccccc---ccCCeeEEEEEEEecccccE
Q 013275          161 KELGAHTLVCTALYSDGEG--E---RKYLPQ--FFKFIVSNPLSVRTKVRVVKVGAT---HFQEITFLEACIENHTKSNL  230 (446)
Q Consensus       161 ke~G~h~L~c~VsY~~~~G--e---~~~frK--~fkF~v~~Pl~VrtK~~~~~~~~~---~~~~~~~LEaqiqN~s~~~l  230 (446)
                      -.+|....-+.|+|-.++.  +   .-.+.|  .-..+..-||+|+-||...+..+.   +.+-.+.|+..+-..++|++
T Consensus       526 gtvgsrmflvyvsyLinttVeekeivckchkdeTvtietvfpfdvavkFvstkfehlervyadIpfllmtdLlsaspwAl  605 (809)
T KOG4386|consen  526 GTVGSRMFLVYVSYLINTTVEEKEIVCKCHKDETVTIETVFPFDVAVKFVSTKFEHLERVYADIPFLLMTDLLSASPWAL  605 (809)
T ss_pred             hhhccchhhHHHHHHhhhHHHHhhHhhhccccceEEEEEEeeeeeeeeeehhhhhhccChhhhhhHHHHHHHhhhchHHH
Confidence            8899988888899987531  1   011233  234444556666666665443321   12233445555666688988


Q ss_pred             EEEeEEeeecCCceeeeecCCCCCCCCCcccccccCCceEEeCCCCeeeEEEEEeecCCCCCCCccccCceeeEEEEEEE
Q 013275          231 YMDQVEFEPSQNWSATMLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITW  310 (446)
Q Consensus       231 ~le~v~Lep~~~~~~~~ln~~~~~~~~~~~~~~~~~~~~l~~~~gd~~q~lf~l~~~~~~~~~~~~~~g~~~lGkL~I~W  310 (446)
                      .|-..+++-.+.++-++ +.     +.        +...+++|.|++...+||+.+..-     ...+|.++.|++.|+|
T Consensus       606 tIVsSelqlapsmttvd-ql-----eS--------qvdnvilqtgEsasecfclqcpsl-----gniEggvatGhyiisW  666 (809)
T KOG4386|consen  606 TIVSSELQLAPSMTTVD-QL-----ES--------QVDNVILQTGESASECFCLQCPSL-----GNIEGGVATGHYIISW  666 (809)
T ss_pred             HHHHHHHhhhhhheeee-cc-----cc--------cccchhhhcccceeeeeeEecccc-----ccccCCCccceEEEEE
Confidence            88887777666555432 10     11        334556788999999999999754     3468899999999999


Q ss_pred             EcC--CCCCceeeEEeeeeecCcCCCeEEEE-EecCceEeeCCcEEEEEEEEeCCCCCcccEEEEEeeCCCCCcceEEEe
Q 013275          311 RTN--LGEPGRLQTQQILGTTITSKEIELNV-VEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMIN  387 (446)
Q Consensus       311 Rs~--~Ge~G~L~Ts~l~~~~~~~~dl~l~v-~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~  387 (446)
                      |+.  |-..-. -|+-+...-.....++|+| .++|++.+|++|..+.+.+.|+|+..++ +++.++++     ++||++
T Consensus       667 kRtsameNipi-ittVitLphviVe~iPlhvnadlpsfgrVReslpvkyhLqnktdlvqd-veisveps-----DaFMFS  739 (809)
T KOG4386|consen  667 KRTSAMENIPI-ITTVITLPHVIVEAIPLHVNADLPSFGRVRESLPVKYHLQNKTDLVQD-VEISVEPS-----DAFMFS  739 (809)
T ss_pred             eecccccCCCc-eeeecccccceeeeccceeecCCCCcceecccccEEEEeccccceeee-EEeecccc-----hhheec
Confidence            985  334433 3344443346778899999 6799999999999999999999999999 99999887     689999


Q ss_pred             cccceeecccCCCCeeEEEEEEEecccceEEeCceEEEecC-------CCeeeccCCCeeeEeec
Q 013275          388 GLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFDKL-------EKITYDSLPDLEIFVDQ  445 (446)
Q Consensus       388 G~s~~~Lg~L~P~~s~~~~L~l~pl~~Glq~isgi~l~D~~-------~~r~y~~~~~~~vfV~~  445 (446)
                      |.+.++| ++.||.+.++.++++|+.+|+|++|.|.|.-.+       +.|++   -++.|||++
T Consensus       740 Glkqirl-riLPGteqemlynfypLmAGyqqlPslninllrfpnfTnQllrRf---iPtsIFVkP  800 (809)
T KOG4386|consen  740 GLKQIRL-RILPGTEQEMLYNFYPLMAGYQQLPSLNINLLRFPNFTNQLLRRF---IPTSIFVKP  800 (809)
T ss_pred             ccceEEE-EEcCCCceEEEEEEehhhchhhhCCcccccCccCCchHHHHHHhh---cCceEEEcc
Confidence            9999999 899999999999999999999999998886322       23344   588999975

>PF12735 Trs65: TRAPP trafficking subunit Trs65; InterPro: IPR024662 This family is one of the subunits of the TRAPP Golgi trafficking complex []

Probab=98.82  E-value=4.1e-08  Score=98.78  Aligned_cols=108  Identities=19%  Similarity=0.278  Sum_probs=91.4

Q ss_pred             CCeEEEEEecCceEeeCCcEEEEEEEEeCCCCCcccEEEEEeeCCC----------------------------------
Q 013275          333 KEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDS----------------------------------  378 (446)
Q Consensus       333 ~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~----------------------------------  378 (446)
                      ..+.++.. -|..|++|++|..++.|.|+|+..++ |.|.+.+...                                  
T Consensus       156 ~gv~~sF~-gp~~V~~Ge~F~w~v~ivN~S~~~r~-L~l~~~~~r~~~~~~~~~~~~~~~~s~~~~~~~~~~~v~~en~~  233 (306)
T PF12735_consen  156 SGVTFSFS-GPSSVKVGEPFSWKVFIVNRSSSPRK-LALYVPPRRRRNDERSNSPPPNPSSSSNLNNKQIADAVTDENIV  233 (306)
T ss_pred             cCeEEEEe-CCceEecCCeEEEEEEEEECCCCCee-EEEEecCccccccccccCCCCCcccccccccccccccceehhHH
Confidence            35555543 45999999999999999999999998 9999887210                                  


Q ss_pred             ------C--C-cceEEEecccceeecccCCCCeeEEEEEEEecccceEEeCceEEEecCCCeeeccCCCeeeEe
Q 013275          379 ------D--E-EKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFDKLEKITYDSLPDLEIFV  443 (446)
Q Consensus       379 ------~--~-~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl~~Glq~isgi~l~D~~~~r~y~~~~~~~vfV  443 (446)
                            .  . ..++++-.. .+++|.|.||++..+.|.++|+.+|++.|.||+|+|..++..+|+-+..+|||
T Consensus       234 ~~~~~~~~~~~~~gli~Lsn-DiriGpL~P~~c~~~eL~fi~l~~G~~~L~~lkvvDl~t~e~~di~~l~~IvV  306 (306)
T PF12735_consen  234 QAMQKYSSVEESTGLICLSN-DIRIGPLAPGACYSVELRFIALSPGVHNLEGLKVVDLNTNEHVDIGDLPDIVV  306 (306)
T ss_pred             HHhhhhcccccCCceEEecc-cccccccCCCceEEEEEEEEEeccceEeecceEEEECCCCceEEeCCCceEEC
Confidence                  0  0 235655554 68999999999999999999999999999999999999999999999999997

TRAPP subunits are found in two different sized complexes, TRAPP I and TRAPP II. While both complexes contain the same seven subunits, Bet3p, Bet5p, Trs20p, Trs23p, Trs31p, Trs33p and Trs85p, with TRAPPC human equivalents, TRAPP II has the additional three subunits ,Trs65p, Trs120p and Trs130p []. While it has been implicated in cell wall biogenesis and stress response, the role of Trs65 in TRAPP II is supported by the findings that the protein co-localises with Trs130p, and deletion of TRS65 in yeast leads to a conditional lethal phenotype if either one of the other TRAPP II-specific subunits is modified []. Furthermore, the trs65 mutant has reduced Ypt31/32p guanine nucleotide exchange, GEF, activity []. Trs65 is also known as killer toxin-resistance protein 11.

>PF08626 TRAPPC9-Trs120: Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit; InterPro: IPR013935 The trafficking protein particle complex TRAPP is a multi-protein complex needed in the early stages of the secretory pathway

Probab=98.34  E-value=0.00037  Score=82.14  Aligned_cols=307  Identities=18%  Similarity=0.240  Sum_probs=177.1

Q ss_pred             ccccccceeecceEEEEEEEEcCCCcceEEEEEEEEEeCCCc-eEecc----------CCC-----CCC-----ccccCC
Q 013275           90 LPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQ-RILLL----------DTS-----KSP-----VESIRA  148 (446)
Q Consensus        90 LP~sfG~iylGEtFs~~i~v~N~s~~~v~~V~ikaelqT~s~-r~~L~----------~~~-----~~~-----~~~L~p  148 (446)
                      ++++-=.+|=||+..+.|.+.|.++.+|..+.++..=.|..+ .-.+.          +.+     ...     -..|+|
T Consensus       788 l~~~~~mlleGE~~~~~ItL~N~S~~pvd~l~~sf~DS~~~~~~~~l~~k~l~~~e~yelE~~l~~~~~~~i~~~~~I~P  867 (1185)
T PF08626_consen  788 LTQGALMLLEGEKQTFTITLRNTSSVPVDFLSFSFQDSTIEPLQKALSNKDLSPDELYELEWQLFKLPAFRILNKPPIPP  867 (1185)
T ss_pred             CCCcceEEECCcEEEEEEEEEECCccccceEEEEEEeccHHHHhhhhhcccCChhhhhhhhhhhhcCcceeecccCccCC
Confidence            455445679999999999999999999999988864111100 00010          000     000     017899


Q ss_pred             CCeeeEEEEEEcccc--CceEEEEEEEEEc--CCCceeeece---EEEEEeecCeEEE-EEeEEcccc------------
Q 013275          149 GGRYDFIVEHDVKEL--GAHTLVCTALYSD--GEGERKYLPQ---FFKFIVSNPLSVR-TKVRVVKVG------------  208 (446)
Q Consensus       149 g~~ld~iv~~~lke~--G~h~L~c~VsY~~--~~Ge~~~frK---~fkF~v~~Pl~Vr-tK~~~~~~~------------  208 (446)
                      |++..+-++.+.+..  ..+-....+.|..  .+++.-+.|+   -+...|.+.++|. .-+..+...            
T Consensus       868 g~~~~~~~~~~~~~~~~~~~~~~i~l~y~~~~~~~~~~y~Rql~ipl~vtV~~slev~~~dilp~~~~~~~~~~~~~~~~  947 (1185)
T PF08626_consen  868 GESATFTVEVDGKPGPIQLTYADIQLEYGYSGEDSSTFYTRQLSIPLTVTVNPSLEVTRCDILPLNSDSVSSNSDSWISY  947 (1185)
T ss_pred             CCEEEEEEEecCcccccceeeeeEEEEecccCCCCCCCeeEEEEEEEEEEEeceEEEeeeeEEecccccccccCcchhhh
Confidence            999999888776653  2444555567763  2344555566   3566666666554 244433100            


Q ss_pred             -----c---cccCCeeEEEEEEEecccccEEEEeEEeeecCCceeee--ecCCCCCCCCCc---ccccc------cC-Cc
Q 013275          209 -----A---THFQEITFLEACIENHTKSNLYMDQVEFEPSQNWSATM--LKADGPHSDYNA---QSREI------FK-PP  268 (446)
Q Consensus       209 -----~---~~~~~~~~LEaqiqN~s~~~l~le~v~Lep~~~~~~~~--ln~~~~~~~~~~---~~~~~------~~-~~  268 (446)
                           +   ....+-.+|...|.|....+|.++ +.+  ...+....  +..    +....   |...+      +. .|
T Consensus       948 ~~~~~~~~~~~~~~~clL~lDlrNsw~~~~~v~-l~~--~~~~~~~~~~I~p----g~t~Ri~vPi~Ri~l~~~~~~~~p 1020 (1185)
T PF08626_consen  948 ITSLKSDVNDDSSDYCLLLLDLRNSWPNPLSVN-LHY--DEDFSSSEITIEP----GHTSRIIVPIKRIYLEDPDFSFKP 1020 (1185)
T ss_pred             hhhhcccccCCCCCeEEEEEEEEecCCCceEEE-EEe--ccCccccceEECC----CCeEEEEEEecccccCCcccccCc
Confidence                 0   023456799999999999988731 112  12222211  111    00000   00000      00 11


Q ss_pred             eEEeCCCCeeeEEEEEeecCCCCCCCccccC-----ceeeEEEEEEEEcCCCCCceeeEEeee----eec--CcCCCeEE
Q 013275          269 VLIRSGGGIHNYLYQLKMLSHGSSSPVKVQG-----SNVLGKLQITWRTNLGEPGRLQTQQIL----GTT--ITSKEIEL  337 (446)
Q Consensus       269 ~l~~~~gd~~q~lf~l~~~~~~~~~~~~~~g-----~~~lGkL~I~WRs~~Ge~G~L~Ts~l~----~~~--~~~~dl~l  337 (446)
                      .  .+....|||+=.   +.... .....+.     ...+-+|...|+...+..|.+.-..+.    ++.  .-.+++++
T Consensus      1021 i--p~l~~~rqfv~s---k~s~e-ee~~~re~FW~RE~ll~~l~~~W~~~~~~~G~i~lR~~irLt~~mv~~L~~~~i~i 1094 (1185)
T PF08626_consen 1021 I--PSLSRNRQFVVS---KLSEE-EERAMRELFWYREELLSRLKGTWKESSNSSGEIDLRGIIRLTPRMVDILRLDPIQI 1094 (1185)
T ss_pred             C--CCcccCceeEEC---CCCHH-HHHHHHHHHHHHHHHHhhcceEEEcCCCCcEEEEcccccccCHHHHHhhccCccce
Confidence            1  112234565422   21110 0000111     146889999999876669988776652    121  34566655


Q ss_pred             EEE--e-cCc---------eEeeCCcEEEEEEEEeCCCCCcccEEEEEeeCC------CCCcceEEEecccceeecccCC
Q 013275          338 NVV--E-VPS---------VVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQND------SDEEKVVMINGLRIMALAPVEA  399 (446)
Q Consensus       338 ~v~--~-~P~---------~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~------~~~~~~~~~~G~s~~~Lg~L~P  399 (446)
                      .+.  . .+.         .+.+++.++++++|+|++++++. +.+....+.      .+...-++|+|.....++.|+|
T Consensus      1095 ~~~l~~~~~~~~~~~~~~~~v~~~~f~~l~v~i~N~s~~~i~-l~~~~~~~~~~~~~~~~~~~ril~~G~Lq~~l~~l~p 1173 (1185)
T PF08626_consen 1095 DFSLSDDSDSVKVGESSKFSVQVDEFYTLRVTITNRSSRPIS-LRLQPSLDHQNGNVALDLDRRILWNGSLQQPLPELEP 1173 (1185)
T ss_pred             EEEEcccccccccCcceeEEEecCCcEEEEEEeecCCCCcee-eEeeeeccCCCcccccCcCCeEEEEccCcccccccCC
Confidence            552  2 222         36799999999999999999876 443332221      1234569999999999999999


Q ss_pred             CCeeEEEEEEE
Q 013275          400 FGSTDFHLNLI  410 (446)
Q Consensus       400 ~~s~~~~L~l~  410 (446)
                      +++.++.+.++
T Consensus      1174 ~~~~~~~~~li 1184 (1185)
T PF08626_consen 1174 GESTEHELSLI 1184 (1185)
T ss_pred             CceEEEEEEEE
Confidence            99999999876

To date, two kinds of TRAPP complexes have been studied, TRAPPI and TRAPP II. These complexes differ in subunit composition []. TRAPP I binds vesicles derived from the endoplasmic reticulum bringing them closer to the acceptor membrane. Trs120 is a subunit specific to the TRAPP II complex [] along with Trs65p and Trs130p(TRAPPC10). It is suggested that Trs120p is required for the stability of the Trs130p subunit, suggesting that these two proteins might interact in some way []. It is likely that there is a complex function for TRAPP II in multiple pathways [].

>PF12742 Gryzun-like: Gryzun, putative Golgi trafficking

Probab=97.72  E-value=8.6e-05  Score=55.44  Aligned_cols=50  Identities=16%  Similarity=0.237  Sum_probs=44.8

Q ss_pred             EEEEEeeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEecccceEEeCceEE
Q 013275          369 FEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITV  424 (446)
Q Consensus       369 l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl~~Glq~isgi~l  424 (446)
                      +.|.++++     +.|+++|.+.+++ .+.||+..++.++++|+..|++.+|-|.|
T Consensus         8 lli~V~~n-----~~F~v~G~~~~~~-~~~~~~~~~i~~~Fipl~aG~~~LP~I~I   57 (57)
T PF12742_consen    8 LLIEVDKN-----DNFIVCGPKKMNF-HMWPGQKFEIPYNFIPLTAGFLKLPKINI   57 (57)
T ss_pred             eEEEEcCC-----CceEEEccceeEE-EEccCceEEEEEEEEEeehheecCccccC
Confidence            55777765     6899999999998 89999999999999999999999999864

>PF12584 TRAPPC10: Trafficking protein particle complex subunit 10, TRAPPC10; InterPro: IPR022233 The trafficking protein particle complex TRAPP is a multi-protein complex needed in the early stages of the secretory pathway

Probab=97.58  E-value=0.001  Score=59.91  Aligned_cols=80  Identities=14%  Similarity=0.260  Sum_probs=63.4

Q ss_pred             CceEeeCCcEEEEEEEEeC-----------CCCCcccEEEEEeeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEe
Q 013275          343 PSVVGIDKPFLLKLKLTNQ-----------TDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIA  411 (446)
Q Consensus       343 P~~v~l~~pF~v~~~v~N~-----------s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~p  411 (446)
                      +...++++|..++++|+|.           .+.... +...+..+    .+.++++|.+...+ .+..++..+|.+.|+|
T Consensus        24 ~~~~~vGqpi~~~l~I~~~~~W~~~~~~~~~~~~~~-~~yei~a~----~~~WlV~Grrrg~f-~~~~~~~~~~~l~LIP   97 (147)
T PF12584_consen   24 PPPCRVGQPIPAELRIKNSRKWSSEDQEESSNEDTE-FMYEIVAD----SDNWLVSGRRRGVF-SLSDGSEHEIPLTLIP   97 (147)
T ss_pred             CcceEeCCeEEEEEEEEEcccCCccccccccCCCcc-EEEEEecC----CCcEEEeccCcceE-EecCCCeEEEEEEEEe
Confidence            5567999999999999995           122233 54555333    36799999998777 5589999999999999


Q ss_pred             cccceEEeCceEEEecC
Q 013275          412 TKLGVQRITGITVFDKL  428 (446)
Q Consensus       412 l~~Glq~isgi~l~D~~  428 (446)
                      |..|+-.+|.|+|....
T Consensus        98 L~~G~L~lP~V~i~~~~  114 (147)
T PF12584_consen   98 LRAGYLPLPKVEIRPYD  114 (147)
T ss_pred             cccceecCCEEEEEecc
Confidence            99999999999998544

To date, two kinds of TRAPP complexes have been studied, TRAPPI and TRAPP II. These complexes differ in subunit composition []. TRAPP I binds vesicles derived from the endoplasmic reticulum bringing them closer to the acceptor membrane. This entry represents a domain which forms part of the TRAPP complex for mediating vesicle docking and fusion in the Golgi apparatus. The fungal version is referred to as Trs130, and an alternative vertebrate alias is TMEM1 [, ].

>PF07705 CARDB: CARDB; InterPro: IPR011635 The APHP (acidic peptide-dependent hydrolases/peptidase) domain is found in a variety of different proteins

Probab=96.59  E-value=0.025  Score=46.24  Aligned_cols=79  Identities=11%  Similarity=0.185  Sum_probs=55.9

Q ss_pred             CCeEEEEEecCceEeeCCcEEEEEEEEeCCCCCcccEEEEEeeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEec
Q 013275          333 KEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIAT  412 (446)
Q Consensus       333 ~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl  412 (446)
                      .||.+.+...|..+..++++++++.|+|.-.....++.+.+..+.     ...    ....++.|.||++..+.+++-+-
T Consensus         2 pDL~v~~~~~~~~~~~g~~~~i~~~V~N~G~~~~~~~~v~~~~~~-----~~~----~~~~i~~L~~g~~~~v~~~~~~~   72 (101)
T PF07705_consen    2 PDLTVSITVSPSNVVPGEPVTITVTVKNNGTADAENVTVRLYLDG-----NSV----STVTIPSLAPGESETVTFTWTPP   72 (101)
T ss_dssp             --EEE-EEEC-SEEETTSEEEEEEEEEE-SSS-BEEEEEEEEETT-----EEE----EEEEESEB-TTEEEEEEEEEE-S
T ss_pred             CCEEEEEeeCCCcccCCCEEEEEEEEEECCCCCCCCEEEEEEECC-----cee----ccEEECCcCCCcEEEEEEEEEeC
Confidence            467776678999999999999999999995555655777776542     122    34567899999999999999999


Q ss_pred             ccceEEeC
Q 013275          413 KLGVQRIT  420 (446)
Q Consensus       413 ~~Glq~is  420 (446)
                      .+|.+.|.
T Consensus        73 ~~G~~~i~   80 (101)
T PF07705_consen   73 SPGSYTIR   80 (101)
T ss_dssp             S-CEEEEE
T ss_pred             CCCeEEEE
Confidence            99988853

; PDB: 2KUT_A 2L0D_A 3IDU_A 2KL6_A.

>PF00927 Transglut_C: Transglutaminase family, C-terminal ig like domain; InterPro: IPR008958 Synonym(s): Protein-glutamine gamma-glutamyltransferase, Fibrinoligase, TGase Transglutaminases catalyse the post-translational modification of proteins at glutamine residues, with formation of isopeptide bonds

Probab=96.53  E-value=0.0049  Score=52.17  Aligned_cols=72  Identities=13%  Similarity=0.196  Sum_probs=54.6

Q ss_pred             ecCceEeeCCcEEEEEEEEeCCCCCcccEEEEEeeCCCCCcceEEEeccc------ceeecccCCCCeeEEEEEEEeccc
Q 013275          341 EVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLR------IMALAPVEAFGSTDFHLNLIATKL  414 (446)
Q Consensus       341 ~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s------~~~Lg~L~P~~s~~~~L~l~pl~~  414 (446)
                      ++++.+.++++|.+.++++|.++..+..+.+.+.-      ..+.++|..      ......|.|+++..+.+.+.|...
T Consensus         6 ~~~~~~~vG~d~~v~v~~~N~~~~~l~~v~~~l~~------~~v~ytG~~~~~~~~~~~~~~l~p~~~~~~~~~i~p~~y   79 (107)
T PF00927_consen    6 KLPGDPVVGQDFTVSVSFTNPSSEPLRNVSLNLCA------FTVEYTGLTRDQFKKEKFEVTLKPGETKSVEVTITPSQY   79 (107)
T ss_dssp             EEESEEBTTSEEEEEEEEEE-SSS-EECEEEEEEE------EEEECTTTEEEEEEEEEEEEEE-TTEEEEEEEEE-HHSH
T ss_pred             EECCCccCCCCEEEEEEEEeCCcCccccceeEEEE------EEEEECCcccccEeEEEcceeeCCCCEEEEEEEEEceeE
Confidence            46677889999999999999988884447777754      357777774      335678999999999999999999


Q ss_pred             ceEE
Q 013275          415 GVQR  418 (446)
Q Consensus       415 Glq~  418 (446)
                      |-.+
T Consensus        80 G~~~   83 (107)
T PF00927_consen   80 GPKQ   83 (107)
T ss_dssp             EEEC
T ss_pred             ecch
Confidence            9843

Members of the transglutaminase family usually have three domains: N-terminal (IPR001102 from INTERPRO), middle (IPR013808 from INTERPRO) and C-terminal. The middle domain is usually well conserved, but family members can display major differences in their N- and C-terminal domains, although their overall structure is conserved []. This entry represents the C-terminal domain found in transglutaminases, which consists of an immunoglobulin-like beta-sandwich consisting of seven strands in two sheets with a Greek key topology. The best known transglutaminase is blood coagulation factor XIII, a plasma tetrameric protein composed of two catalytic A subunits and two non-catalytic B subunits. Factor XIII is responsible for cross-linking fibrin chains, thus stabilising the fibrin clot. Protein-glutamine gamma-glutamyltransferases (2.3.2.13 from EC) are calcium-dependent enzymes that catalyse the cross-linking of proteins by promoting the formation of isopeptide bonds between the gamma-carboxyl group of a glutamine in one polypeptide chain and the epsilon-amino group of a lysine in a second polypeptide chain. TGases also catalyse the conjugation of polyamines to proteins [, ].; GO: 0003810 protein-glutamine gamma-glutamyltransferase activity, 0018149 peptide cross-linking; PDB: 2XZZ_A 1GGY_B 1FIE_B 1GGU_B 1GGT_B 1F13_A 1QRK_B 1EVU_A 1EX0_B 1L9N_B ....

>PF10633 NPCBM_assoc: NPCBM-associated, NEW3 domain of alpha-galactosidase; InterPro: IPR018905 This domain has been named NEW3, but its function is not known

Probab=95.32  E-value=0.048  Score=43.41  Aligned_cols=72  Identities=22%  Similarity=0.321  Sum_probs=45.6

Q ss_pred             cceEEEEEEEEcCCCcceEEEEEEEEEeCCCceEeccCCCCCCccccCCCCeeeEEEEEEccc---cCceEEEEEEEEE
Q 013275          100 GETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKE---LGAHTLVCTALYS  175 (446)
Q Consensus       100 GEtFs~~i~v~N~s~~~v~~V~ikaelqT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~~~lke---~G~h~L~c~VsY~  175 (446)
                      ||++...+.|.|.....++++.+.+++  |..+. . ......+..|+||++....+...+-+   .|.|.+.+.+.|+
T Consensus         4 G~~~~~~~tv~N~g~~~~~~v~~~l~~--P~GW~-~-~~~~~~~~~l~pG~s~~~~~~V~vp~~a~~G~y~v~~~a~y~   78 (78)
T PF10633_consen    4 GETVTVTLTVTNTGTAPLTNVSLSLSL--PEGWT-V-SASPASVPSLPPGESVTVTFTVTVPADAAPGTYTVTVTARYT   78 (78)
T ss_dssp             TEEEEEEEEEE--SSS-BSS-EEEEE----TTSE-----EEEEE--B-TTSEEEEEEEEEE-TT--SEEEEEEEEEE--
T ss_pred             CCEEEEEEEEEECCCCceeeEEEEEeC--CCCcc-c-cCCccccccCCCCCEEEEEEEEECCCCCCCceEEEEEEEEeC
Confidence            999999999999999999998887776  55443 1 00112244899999888777777754   5999999999995

It is found on proteins which are bacterial galactosidases [].; PDB: 1EUT_A 2BZD_A 1WCQ_C 2BER_A 1W8O_A 1EUU_A 1W8N_A.

>PF07919 Gryzun: Gryzun, putative trafficking through Golgi; InterPro: IPR012880 The proteins featured in this family are all hypothetical eukaryotic proteins of unknown function

Probab=95.03  E-value=4.9  Score=43.45  Aligned_cols=223  Identities=11%  Similarity=0.149  Sum_probs=120.4

Q ss_pred             CeEEEEEeEEccccccccCCeeEEEEEEEecccccEEEEeEEeeecCCceeeeecCCCC-CCCCCccc---ccccCCceE
Q 013275          195 PLSVRTKVRVVKVGATHFQEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGP-HSDYNAQS---REIFKPPVL  270 (446)
Q Consensus       195 Pl~VrtK~~~~~~~~~~~~~~~~LEaqiqN~s~~~l~le~v~Lep~~~~~~~~ln~~~~-~~~~~~~~---~~~~~~~~l  270 (446)
                      +|+.+..|....   ....+.+.+++.|.+....||.+.++++.-++.-.-..+..+.. ....+.+.   ...-....+
T Consensus        11 ~l~~~~~F~~~~---~~~~~~~~~ql~i~S~~~~pi~~s~l~V~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L   87 (554)
T PF07919_consen   11 FLEASVAFSQSE---GKVGEPVQFQLSIRSNAPSPIRFSSLKVNFSGSLYPIVISHSDADASSADSSTSSGSPLSGSADL   87 (554)
T ss_pred             cEEEEEEEccCC---ccCCCeEEEEEEEEcCCCCCEEeeEEEEEeeCCCCCceEeccccccccccCcccccccccCccce
Confidence            455555554432   11366788899999999999999999998665422211111110 00000000   001123345


Q ss_pred             EeCCCCeeeEEEEEeecCCCCCCCccccC-ceeeE----EEEEEEEcCCCCC---ceeeEEee---------------ee
Q 013275          271 IRSGGGIHNYLYQLKMLSHGSSSPVKVQG-SNVLG----KLQITWRTNLGEP---GRLQTQQI---------------LG  327 (446)
Q Consensus       271 ~~~~gd~~q~lf~l~~~~~~~~~~~~~~g-~~~lG----kL~I~WRs~~Ge~---G~L~Ts~l---------------~~  327 (446)
                      .+.||....|-|.+.++............ ...+|    .+.+.|+-..+..   ....++..               .+
T Consensus        88 ~l~p~~~kv~~~~~~~~~~~~~g~~~i~sv~L~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~  167 (554)
T PF07919_consen   88 TLSPGQTKVFSFKFVPREQDVSGELEITSVTLQLGSDKFDLTLSWSFESSSSSSSFWWWQSSDGPKSRPIRKPRDQSSIR  167 (554)
T ss_pred             EEeecceEEEEEEEeccccccCCcEEEEEEEEEEecCeEEEEEEeccccccccccccccccCCcceeeeccCCCCCCEEE
Confidence            56688888888887776521101111111 23455    3556676542221   11111110               01


Q ss_pred             ecCcCCCeEEEEEecCceEeeCCcEEEEEEEEeCCCCCccc-EEEEEe--------eCCCCCcceEEEec-------ccc
Q 013275          328 TTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGP-FEIWLS--------QNDSDEEKVVMING-------LRI  391 (446)
Q Consensus       328 ~~~~~~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~-l~l~l~--------~~~~~~~~~~~~~G-------~s~  391 (446)
                      -.+....+++.+.+.-....++|.+.+.++|.|..++.... +.+.+-        ...+......-|.+       ...
T Consensus       168 I~p~pp~v~I~~~~~~~~~l~gE~~~i~i~I~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (554)
T PF07919_consen  168 ILPRPPKVSIKLPNHKPPALTGEFYPIPITISNNEDEEASGVLEVRLLHPSQLGVSSEETEDLSQVNWDSDKDDEPLFLG  247 (554)
T ss_pred             EECCCCCeEEEeCCCCCCeEcCCEEEEEEEEEcCCCccceeEEEEEEecccccccccccCccceecccccccccchhccC
Confidence            12344566666644456678999999999999998776651 222332        01100111122333       335


Q ss_pred             eeecccCCCCeeEEEEEEEecccceEEeC
Q 013275          392 MALAPVEAFGSTDFHLNLIATKLGVQRIT  420 (446)
Q Consensus       392 ~~Lg~L~P~~s~~~~L~l~pl~~Glq~is  420 (446)
                      ..+|.|.++++.+..+.+....+|-..|.
T Consensus       248 ~~lg~l~~~~s~~~~l~i~~~~~~~~~L~  276 (554)
T PF07919_consen  248 IPLGELAPGSSITVTLYIRTSRPGEYELS  276 (554)
T ss_pred             cccccCCCCCcEEEEEEEEeCCceeEEEE
Confidence            67899999999999999887666666554

The region in question is approximately 150 residues long.

>PF14874 PapD-like: Flagellar-associated PapD-like

Probab=94.92  E-value=0.3  Score=40.50  Aligned_cols=73  Identities=16%  Similarity=0.299  Sum_probs=53.4

Q ss_pred             cccceeecceEEEEEEEEcCCCcceEEEEEEEEEeC-CCceEeccCCCCCCccccCCCCeeeEEEEEE-ccccCceEEEE
Q 013275           93 AFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQT-DKQRILLLDTSKSPVESIRAGGRYDFIVEHD-VKELGAHTLVC  170 (446)
Q Consensus        93 sfG~iylGEtFs~~i~v~N~s~~~v~~V~ikaelqT-~s~r~~L~~~~~~~~~~L~pg~~ld~iv~~~-lke~G~h~L~c  170 (446)
                      .||++.+|++.+..|.+.|.+..++   ++++.... .+..+....    .-+.|+||++.+.-|.+. -++.|.+.-..
T Consensus        12 dFG~v~~g~~~~~~v~l~N~s~~p~---~f~v~~~~~~~~~~~v~~----~~g~l~PG~~~~~~V~~~~~~~~g~~~~~l   84 (102)
T PF14874_consen   12 DFGNVFVGQTYSRTVTLTNTSSIPA---RFRVRQPESLSSFFSVEP----PSGFLAPGESVELEVTFSPTKPLGDYEGSL   84 (102)
T ss_pred             EeeEEccCCEEEEEEEEEECCCCCE---EEEEEeCCcCCCCEEEEC----CCCEECCCCEEEEEEEEEeCCCCceEEEEE
Confidence            6999999999999999999998874   44444443 223333321    135799999999999999 88889775444


Q ss_pred             EE
Q 013275          171 TA  172 (446)
Q Consensus       171 ~V  172 (446)
                      .|
T Consensus        85 ~i   86 (102)
T PF14874_consen   85 VI   86 (102)
T ss_pred             EE
Confidence            44

>PF05753 TRAP_beta: Translocon-associated protein beta (TRAPB); InterPro: IPR008856 This family consists of several eukaryotic translocon-associated protein beta (TRAPB) or signal sequence receptor beta subunit (SSR-beta) proteins

Probab=93.84  E-value=0.56  Score=43.84  Aligned_cols=82  Identities=9%  Similarity=0.024  Sum_probs=63.9

Q ss_pred             ecCceEeeCCcEEEEEEEEeCCCCCcccEEEEEeeCCCCCcce-EEEecccceeecccCCCCeeEEEEEEEecccceEEe
Q 013275          341 EVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKV-VMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRI  419 (446)
Q Consensus       341 ~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~-~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl~~Glq~i  419 (446)
                      -++..+..++-++|++.|.|.-+....  .|.+..+.= ..+. -++.|.....+..|+||++..+.+.+-|...|...+
T Consensus        29 il~~~~v~g~~v~V~~~iyN~G~~~A~--dV~l~D~~f-p~~~F~lvsG~~s~~~~~i~pg~~vsh~~vv~p~~~G~f~~  105 (181)
T PF05753_consen   29 ILNKYLVEGEDVTVTYTIYNVGSSAAY--DVKLTDDSF-PPEDFELVSGSLSASWERIPPGENVSHSYVVRPKKSGYFNF  105 (181)
T ss_pred             eccccccCCcEEEEEEEEEECCCCeEE--EEEEECCCC-CccccEeccCceEEEEEEECCCCeEEEEEEEeeeeeEEEEc
Confidence            366777889999999999999555443  355543210 1123 468898889999999999999999999999999999


Q ss_pred             CceEEE
Q 013275          420 TGITVF  425 (446)
Q Consensus       420 sgi~l~  425 (446)
                      ..-.|.
T Consensus       106 ~~a~Vt  111 (181)
T PF05753_consen  106 TPAVVT  111 (181)
T ss_pred             cCEEEE
Confidence            997775

The normal translocation of nascent polypeptides into the lumen of the endoplasmic reticulum (ER) is thought to be aided in part by a translocon-associated protein (TRAP) complex consisting of 4 protein subunits. The association of mature proteins with the ER and Golgi, or other intracellular locales, such as lysosomes, depends on the initial targeting of the nascent polypeptide to the ER membrane. A similar scenario must also exist for proteins destined for secretion [].; GO: 0005783 endoplasmic reticulum, 0016021 integral to membrane

>PF07705 CARDB: CARDB; InterPro: IPR011635 The APHP (acidic peptide-dependent hydrolases/peptidase) domain is found in a variety of different proteins

Probab=93.38  E-value=0.56  Score=38.13  Aligned_cols=77  Identities=13%  Similarity=0.204  Sum_probs=54.4

Q ss_pred             cccceeecceEEEEEEEEcCCCcceEEEEEEEEEeCCCceEeccCCCCCCccccCCCCeeeEEEEEEccccCceEEEEEE
Q 013275           93 AFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTA  172 (446)
Q Consensus        93 sfG~iylGEtFs~~i~v~N~s~~~v~~V~ikaelqT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~~~lke~G~h~L~c~V  172 (446)
                      +-+.++.|+.+...+.|.|.......++.++..+  ....+   .  ...+..|+||++....+.+...+.|.|.+.+.|
T Consensus        11 ~~~~~~~g~~~~i~~~V~N~G~~~~~~~~v~~~~--~~~~~---~--~~~i~~L~~g~~~~v~~~~~~~~~G~~~i~~~i   83 (101)
T PF07705_consen   11 SPSNVVPGEPVTITVTVKNNGTADAENVTVRLYL--DGNSV---S--TVTIPSLAPGESETVTFTWTPPSPGSYTIRVVI   83 (101)
T ss_dssp             C-SEEETTSEEEEEEEEEE-SSS-BEEEEEEEEE--TTEEE---E--EEEESEB-TTEEEEEEEEEE-SS-CEEEEEEEE
T ss_pred             CCCcccCCCEEEEEEEEEECCCCCCCCEEEEEEE--CCcee---c--cEEECCcCCCcEEEEEEEEEeCCCCeEEEEEEE
Confidence            3456899999999999999988888888777533  22222   1  122568999999999999999999999999988


Q ss_pred             EEEc
Q 013275          173 LYSD  176 (446)
Q Consensus       173 sY~~  176 (446)
                      .+..
T Consensus        84 D~~n   87 (101)
T PF07705_consen   84 DPDN   87 (101)
T ss_dssp             STTT
T ss_pred             eeCC
Confidence            6643

; PDB: 2KUT_A 2L0D_A 3IDU_A 2KL6_A.

>PF10633 NPCBM_assoc: NPCBM-associated, NEW3 domain of alpha-galactosidase; InterPro: IPR018905 This domain has been named NEW3, but its function is not known

Probab=90.47  E-value=0.82  Score=36.23  Aligned_cols=59  Identities=10%  Similarity=0.012  Sum_probs=34.4

Q ss_pred             eeCCcEEEEEEEEeCCCCCcccEEEEEeeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEe
Q 013275          347 GIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIA  411 (446)
Q Consensus       347 ~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~p  411 (446)
                      .-++++++++.|+|..+..+..+.+.++--     .++- ...+...++.|.||++.++.+.+-|
T Consensus         2 ~~G~~~~~~~tv~N~g~~~~~~v~~~l~~P-----~GW~-~~~~~~~~~~l~pG~s~~~~~~V~v   60 (78)
T PF10633_consen    2 TPGETVTVTLTVTNTGTAPLTNVSLSLSLP-----EGWT-VSASPASVPSLPPGESVTVTFTVTV   60 (78)
T ss_dssp             -TTEEEEEEEEEE--SSS-BSS-EEEEE-------TTSE----EEEEE--B-TTSEEEEEEEEEE
T ss_pred             CCCCEEEEEEEEEECCCCceeeEEEEEeCC-----CCcc-ccCCccccccCCCCCEEEEEEEEEC
Confidence            457889999999999665544477777642     2343 2333456668999999999998765

It is found on proteins which are bacterial galactosidases [].; PDB: 1EUT_A 2BZD_A 1WCQ_C 2BER_A 1W8O_A 1EUU_A 1W8N_A.

>PF05753 TRAP_beta: Translocon-associated protein beta (TRAPB); InterPro: IPR008856 This family consists of several eukaryotic translocon-associated protein beta (TRAPB) or signal sequence receptor beta subunit (SSR-beta) proteins

Probab=90.10  E-value=2.5  Score=39.46  Aligned_cols=82  Identities=21%  Similarity=0.215  Sum_probs=62.9

Q ss_pred             eecceEEEEEEEEcCCCcceEEEEEEEEEeCCCceEeccCCC-CCCccccCCCCeeeEEEEEEccccCceEE-EEEEEEE
Q 013275           98 YLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTS-KSPVESIRAGGRYDFIVEHDVKELGAHTL-VCTALYS  175 (446)
Q Consensus        98 ylGEtFs~~i~v~N~s~~~v~~V~ikaelqT~s~r~~L~~~~-~~~~~~L~pg~~ld~iv~~~lke~G~h~L-~c~VsY~  175 (446)
                      -.|+.....+.+-|.-+..+.||.|.-+= -++....|.... ......|.||+++.-++.-.=+..|.|.+ ...|+|+
T Consensus        35 v~g~~v~V~~~iyN~G~~~A~dV~l~D~~-fp~~~F~lvsG~~s~~~~~i~pg~~vsh~~vv~p~~~G~f~~~~a~VtY~  113 (181)
T PF05753_consen   35 VEGEDVTVTYTIYNVGSSAAYDVKLTDDS-FPPEDFELVSGSLSASWERIPPGENVSHSYVVRPKKSGYFNFTPAVVTYR  113 (181)
T ss_pred             cCCcEEEEEEEEEECCCCeEEEEEEECCC-CCccccEeccCceEEEEEEECCCCeEEEEEEEeeeeeEEEEccCEEEEEE
Confidence            45999999999999999999999997711 133444443221 12246899999998888888899999988 6779999


Q ss_pred             cCCCc
Q 013275          176 DGEGE  180 (446)
Q Consensus       176 ~~~Ge  180 (446)
                      ...|.
T Consensus       114 ~~~~~  118 (181)
T PF05753_consen  114 DSEGA  118 (181)
T ss_pred             CCCCC
Confidence            87663

The normal translocation of nascent polypeptides into the lumen of the endoplasmic reticulum (ER) is thought to be aided in part by a translocon-associated protein (TRAP) complex consisting of 4 protein subunits. The association of mature proteins with the ER and Golgi, or other intracellular locales, such as lysosomes, depends on the initial targeting of the nascent polypeptide to the ER membrane. A similar scenario must also exist for proteins destined for secretion [].; GO: 0005783 endoplasmic reticulum, 0016021 integral to membrane

>smart00809 Alpha_adaptinC2 Adaptin C-terminal domain

Probab=86.52  E-value=11  Score=31.00  Aligned_cols=74  Identities=14%  Similarity=0.151  Sum_probs=58.8

Q ss_pred             cceEEEEEEEEcCCCcceEEEEEEEEEeCCCceEeccCCCCCCccccCCCCeeeEEEEEEccccCceEEEEEEEEEcC
Q 013275          100 GETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDG  177 (446)
Q Consensus       100 GEtFs~~i~v~N~s~~~v~~V~ikaelqT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~~~lke~G~h~L~c~VsY~~~  177 (446)
                      +...+..+.+.|.+..++++..+.+-. .....+.+...+   ...|.||+.+...+.......+.-.+.+.|+|..+
T Consensus        17 ~~~~~i~~~~~N~s~~~it~f~~~~av-pk~~~l~l~~~s---~~~l~p~~~i~q~~~i~~~~~~~~~~~~~vsy~~~   90 (104)
T smart00809       17 PGLIRITLTFTNKSPSPITNFSFQAAV-PKSLKLQLQPPS---SPTLPPGGQITQVLKVENPGKFPLRLRLRLSYLLG   90 (104)
T ss_pred             CCeEEEEEEEEeCCCCeeeeEEEEEEc-ccceEEEEcCCC---CCccCCCCCEEEEEEEECCCCCCEEEEEEEEEEEC
Confidence            445678889999999999999998863 345566664322   24689999999999999988888999999999986

Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. Gamma-adaptin is a subunit of the golgi adaptor. Alpha adaptin is a heterotetramer that regulates clathrin-bud formation. The carboxyl-terminal appendage of the alpha subunit regulates translocation of endocytic accessory proteins to the bud site. This Ig-fold domain is found in alpha, beta and gamma adaptins and consists of a beta-sandwich containing 7 strands in 2 beta-sheets in a greek-key topology PUBMED:10430869, PUBMED:12176391. The adaptor appendage contains an additional N-terminal strand.

>PF11797 DUF3324: Protein of unknown function C-terminal (DUF3324); InterPro: IPR021759 This family consists of several hypothetical bacterial proteins of unknown function

Probab=86.22  E-value=6  Score=35.20  Aligned_cols=93  Identities=13%  Similarity=0.181  Sum_probs=68.7

Q ss_pred             cceeecc---eEEEEEEEEcCCCcceEEEEEEEEEeCCCceEeccCCCCCCccccCCCCeeeEEEEEE--ccccCceEEE
Q 013275           95 GAIYLGE---TFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHD--VKELGAHTLV  169 (446)
Q Consensus        95 G~iylGE---tFs~~i~v~N~s~~~v~~V~ikaelqT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~~~--lke~G~h~L~  169 (446)
                      +++-+|+   .....+.+.|....-+.++.+++++.-..+.-.+.... .....++|+..+++-|..+  -=..|.|.|.
T Consensus        33 ~~v~~~~~n~~~~i~~~l~N~~~~~l~~~~v~a~V~~~~~~k~~~~~~-~~~~~mAPNS~f~~~i~~~~~~lk~G~Y~l~  111 (140)
T PF11797_consen   33 GKVKPGQINGRNVIQANLQNPQPAILKKLTVDAKVTKKGSKKVLYTFK-KENMQMAPNSNFNFPIPLGGKKLKPGKYTLK  111 (140)
T ss_pred             eeeeeeEECCeeEEEEEEECCCchhhcCcEEEEEEEECCCCeEEEEee-ccCCEECCCCeEEeEecCCCcCccCCEEEEE
Confidence            4444444   66677889999999999999999999988754443322 2245799999999988885  4456999999


Q ss_pred             EEEEEEcCCCceeeeceEEEEE
Q 013275          170 CTALYSDGEGERKYLPQFFKFI  191 (446)
Q Consensus       170 c~VsY~~~~Ge~~~frK~fkF~  191 (446)
                      .++.+..   +...|.|-|+..
T Consensus       112 ~~~~~~~---~~W~f~k~F~It  130 (140)
T PF11797_consen  112 ITAKSGK---KTWTFTKDFTIT  130 (140)
T ss_pred             EEEEcCC---cEEEEEEEEEEC
Confidence            9987643   356777766653

>PF02883 Alpha_adaptinC2: Adaptin C-terminal domain; InterPro: IPR008152 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=84.70  E-value=21  Score=30.07  Aligned_cols=75  Identities=11%  Similarity=0.113  Sum_probs=55.0

Q ss_pred             ecceEEEEEEEEcCCCcceEEEEEEEEEeCCCceEeccCCCCCCccccCCCCeeeEEEEEEc-----cccCceEEEEEEE
Q 013275           99 LGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDV-----KELGAHTLVCTAL  173 (446)
Q Consensus        99 lGEtFs~~i~v~N~s~~~v~~V~ikaelqT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~~~l-----ke~G~h~L~c~Vs  173 (446)
                      =+...+..+.+.|-+..+++++.+.+..- .+..+.|...   +...|.|++.+.-.+....     .....-.+.+.|+
T Consensus        22 ~~~~~~i~~~f~N~s~~~it~f~~q~avp-k~~~l~l~~~---s~~~i~p~~~i~Q~~~v~~~~~~~~~~~~l~~~~~vs   97 (115)
T PF02883_consen   22 NPNQGRIKLTFGNKSSQPITNFSFQAAVP-KSFKLQLQPP---SSSTIPPGQQITQVIKVENSPFSEPTPKPLKPRLRVS   97 (115)
T ss_dssp             ETTEEEEEEEEEE-SSS-BEEEEEEEEEB-TTSEEEEEES---S-SSB-TTTEEEEEEEEEESS-BSTTSSTTEEEEEEE
T ss_pred             CCCEEEEEEEEEECCCCCcceEEEEEEec-cccEEEEeCC---CCCeeCCCCeEEEEEEEEEeecccCCCCCcCeEEEEE
Confidence            46677888999999999999999998766 5666666432   2346889999999999999     2222338999999


Q ss_pred             EEcC
Q 013275          174 YSDG  177 (446)
Q Consensus       174 Y~~~  177 (446)
                      |...
T Consensus        98 y~~~  101 (115)
T PF02883_consen   98 YNVG  101 (115)
T ss_dssp             EEET
T ss_pred             EEEC
Confidence            9985

These vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transport []. Clathrin coats contain both clathrin (acts as a scaffold) and adaptor complexes that link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. The two major types of clathrin adaptor complexes are the heterotetrameric adaptor protein (AP) complexes, and the monomeric GGA (Golgi-localising, Gamma-adaptin ear domain homology, ARF-binding proteins) adaptors [, ]. AP (adaptor protein) complexes are found in coated vesicles and clathrin-coated pits. AP complexes connect cargo proteins and lipids to clathrin at vesicle budding sites, as well as binding accessory proteins that regulate coat assembly and disassembly (such as AP180, epsins and auxilin). There are different AP complexes in mammals. AP1 is responsible for the transport of lysosomal hydrolases between the TGN and endosomes []. AP2 associates with the plasma membrane and is responsible for endocytosis []. AP3 is responsible for protein trafficking to lysosomes and other related organelles []. AP4 is less well characterised. AP complexes are heterotetramers composed of two large subunits (adaptins), a medium subunit (mu) and a small subunit (sigma). For example, in AP1 these subunits are gamma-1-adaptin, beta-1-adaptin, mu-1 and sigma-1, while in AP2 they are alpha-adaptin, beta-2-adaptin, mu-2 and sigma-2. Each subunit has a specific function. Adaptins recognise and bind to clathrin through their hinge region (clathrin box), and recruit accessory proteins that modulate AP function through their C-terminal ear (appendage) domains. Mu recognises tyrosine-based sorting signals within the cytoplasmic domains of transmembrane cargo proteins []. One function of clathrin and AP2 complex-mediated endocytosis is to regulate the number of GABA(A) receptors available at the cell surface []. GGAs (Golgi-localising, Gamma-adaptin ear domain homology, ARF-binding proteins) are a family of monomeric clathrin adaptor proteins that are conserved from yeasts to humans. GGAs regulate clathrin-mediated the transport of proteins (such as mannose 6-phosphate receptors) from the TGN to endosomes and lysosomes through interactions with TGN-sorting receptors, sometimes in conjunction with AP-1 [, ]. GGAs bind cargo, membranes, clathrin and accessory factors. GGA1, GGA2 and GGA3 all contain a domain homologous to the ear domain of gamma-adaptin. GGAs are composed of a single polypeptide with four domains: an N-terminal VHS (Vps27p/Hrs/Stam) domain, a GAT (GGA and Tom1) domain, a hinge region, and a C-terminal GAE (gamma-adaptin ear) domain. The VHS domain is responsible for endocytosis and signal transduction, recognising transmembrane cargo through the ACLL sequence in the cytoplasmic domains of sorting receptors []. The GAT domain (also found in Tom1 proteins) interacts with ARF (ADP-ribosylation factor) to regulate membrane trafficking [], and with ubiquitin for receptor sorting []. The hinge region contains a clathrin box for recognition and binding to clathrin, similar to that found in AP adaptins. The GAE domain is similar to the AP gamma-adaptin ear domain, and is responsible for the recruitment of accessory proteins that regulate clathrin-mediated endocytosis []. This entry represents a beta-sandwich structural motif found in the appendage (ear) domain of alpha-, beta- and gamma-adaptin from AP clathrin adaptor complexes, and the GAE (gamma-adaptin ear) domain of GGA adaptor proteins. These domains have an immunoglobulin-like beta-sandwich fold containing 7 or 8 strands in 2 beta-sheets in a Greek key topology [, ]. Although these domains share a similar fold, there is little sequence identity between the alpha/beta-adaptins and gamma-adaptin/GAE. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030131 clathrin adaptor complex; PDB: 3MNM_B 3ZY7_B 1GYU_A 1GYW_B 2A7B_A 1GYV_A 2E9G_A 1E42_B 2G30_A 2IV9_B ....

>PF14874 PapD-like: Flagellar-associated PapD-like

Probab=84.38  E-value=8.1  Score=31.78  Aligned_cols=66  Identities=12%  Similarity=0.132  Sum_probs=48.4

Q ss_pred             eEeeCCcEEEEEEEEeCCCCCcccEEEEEeeCCCCCcceEEEecccceeecccCCCCeeEEEEEEE-ecccceEE
Q 013275          345 VVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLI-ATKLGVQR  418 (446)
Q Consensus       345 ~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~-pl~~Glq~  418 (446)
                      .+.+++....++.|+|.+..... +.+.....   ....|.+.-.    =|.|.||.+.++.+.+. +-..|...
T Consensus        15 ~v~~g~~~~~~v~l~N~s~~p~~-f~v~~~~~---~~~~~~v~~~----~g~l~PG~~~~~~V~~~~~~~~g~~~   81 (102)
T PF14874_consen   15 NVFVGQTYSRTVTLTNTSSIPAR-FRVRQPES---LSSFFSVEPP----SGFLAPGESVELEVTFSPTKPLGDYE   81 (102)
T ss_pred             EEccCCEEEEEEEEEECCCCCEE-EEEEeCCc---CCCCEEEECC----CCEECCCCEEEEEEEEEeCCCCceEE
Confidence            46789999999999999999876 66655331   1234555432    35789999999999999 55567654

>PF00207 A2M: Alpha-2-macroglobulin family; InterPro: IPR001599 This entry contains serum complement C3 and C4 precursors and alpha-macrogrobulins

Probab=81.76  E-value=6.1  Score=32.26  Aligned_cols=42  Identities=19%  Similarity=0.267  Sum_probs=29.8

Q ss_pred             CcCCCeEEEEEecCceEeeCCcEEEEEEEEeCCCCCcccEEEEE
Q 013275          330 ITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWL  373 (446)
Q Consensus       330 ~~~~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l  373 (446)
                      ...+++-+. .++|.+++.++.+.+.+.|.|+.+..++ ++|.|
T Consensus        51 ~v~~p~~i~-~~lP~~l~~GD~~~i~v~v~N~~~~~~~-v~V~l   92 (92)
T PF00207_consen   51 TVFKPFFIQ-LNLPRSLRRGDQIQIPVTVFNYTDKDQE-VTVTL   92 (92)
T ss_dssp             EEB-SEEEE-EE--SEEETTSEEEEEEEEEE-SSS-EE-EEEEE
T ss_pred             EEEeeEEEE-cCCCcEEecCCEEEEEEEEEeCCCCCEE-EEEEC
Confidence            445666544 5899999999999999999999999877 66654

The alpha-macroglobulin (aM) family of proteins includes protease inhibitors [], typified by the human tetrameric a2-macroglobulin (a2M); they belong to the MEROPS proteinase inhibitor family I39, clan IL. These protease inhibitors share several defining properties, which include (i) the ability to inhibit proteases from all catalytic classes, (ii) the presence of a 'bait region' and a thiol ester, (iii) a similar protease inhibitory mechanism and (iv) the inactivation of the inhibitory capacity by reaction of the thiol ester with small primary amines. aM protease inhibitors inhibit by steric hindrance []. The mechanism involves protease cleavage of the bait region, a segment of the aM that is particularly susceptible to proteolytic cleavage, which initiates a conformational change such that the aM collapses about the protease. In the resulting aM-protease complex, the active site of the protease is sterically shielded, thus substantially decreasing access to protein substrates. Two additional events occur as a consequence of bait region cleavage, namely (i) the h-cysteinyl-g-glutamyl thiol ester becomes highly reactive and (ii) a major conformational change exposes a conserved COOH-terminal receptor binding domain [] (RBD). RBD exposure allows the aM protease complex to bind to clearance receptors and be removed from circulation []. Tetrameric, dimeric, and, more recently, monomeric aM protease inhibitors have been identified [, ].; GO: 0004866 endopeptidase inhibitor activity; PDB: 3KLS_B 3PRX_C 3KM9_B 3PVM_C 3CU7_A 4E0S_A 4A5W_A 2PN5_A 3FRP_G 3HRZ_B ....

>PF00927 Transglut_C: Transglutaminase family, C-terminal ig like domain; InterPro: IPR008958 Synonym(s): Protein-glutamine gamma-glutamyltransferase, Fibrinoligase, TGase Transglutaminases catalyse the post-translational modification of proteins at glutamine residues, with formation of isopeptide bonds

Probab=81.21  E-value=2  Score=35.99  Aligned_cols=75  Identities=19%  Similarity=0.219  Sum_probs=47.4

Q ss_pred             cceeecceEEEEEEEEcCCCcceEEEEEEEEEeCC----CceEeccCCCCCCccccCCCCeeeEEEEEEccccCceEEEE
Q 013275           95 GAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTD----KQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVC  170 (446)
Q Consensus        95 G~iylGEtFs~~i~v~N~s~~~v~~V~ikaelqT~----s~r~~L~~~~~~~~~~L~pg~~ld~iv~~~lke~G~h~L~c  170 (446)
                      |.+.+|+.|.+.+.+.|.++..+++|.+....++-    -.+-.+..  .....+|+||+.....+...=++-|..-+.+
T Consensus         9 ~~~~vG~d~~v~v~~~N~~~~~l~~v~~~l~~~~v~ytG~~~~~~~~--~~~~~~l~p~~~~~~~~~i~p~~yG~~~~l~   86 (107)
T PF00927_consen    9 GDPVVGQDFTVSVSFTNPSSEPLRNVSLNLCAFTVEYTGLTRDQFKK--EKFEVTLKPGETKSVEVTITPSQYGPKQLLV   86 (107)
T ss_dssp             SEEBTTSEEEEEEEEEE-SSS-EECEEEEEEEEEEECTTTEEEEEEE--EEEEEEE-TTEEEEEEEEE-HHSHEEECCEE
T ss_pred             CCccCCCCEEEEEEEEeCCcCccccceeEEEEEEEEECCcccccEeE--EEcceeeCCCCEEEEEEEEEceeEecchhcc
Confidence            56789999999999999999999998887755542    11101100  1124578888887777666666666644444


Q ss_pred             E
Q 013275          171 T  171 (446)
Q Consensus       171 ~  171 (446)
                      .
T Consensus        87 ~   87 (107)
T PF00927_consen   87 D   87 (107)
T ss_dssp             E
T ss_pred             h
Confidence            3

Members of the transglutaminase family usually have three domains: N-terminal (IPR001102 from INTERPRO), middle (IPR013808 from INTERPRO) and C-terminal. The middle domain is usually well conserved, but family members can display major differences in their N- and C-terminal domains, although their overall structure is conserved []. This entry represents the C-terminal domain found in transglutaminases, which consists of an immunoglobulin-like beta-sandwich consisting of seven strands in two sheets with a Greek key topology. The best known transglutaminase is blood coagulation factor XIII, a plasma tetrameric protein composed of two catalytic A subunits and two non-catalytic B subunits. Factor XIII is responsible for cross-linking fibrin chains, thus stabilising the fibrin clot. Protein-glutamine gamma-glutamyltransferases (2.3.2.13 from EC) are calcium-dependent enzymes that catalyse the cross-linking of proteins by promoting the formation of isopeptide bonds between the gamma-carboxyl group of a glutamine in one polypeptide chain and the epsilon-amino group of a lysine in a second polypeptide chain. TGases also catalyse the conjugation of polyamines to proteins [, ].; GO: 0003810 protein-glutamine gamma-glutamyltransferase activity, 0018149 peptide cross-linking; PDB: 2XZZ_A 1GGY_B 1FIE_B 1GGU_B 1GGT_B 1F13_A 1QRK_B 1EVU_A 1EX0_B 1L9N_B ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	446
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.5 bits (117), Expect = 2e-06
 Identities = 60/390 (15%), Positives = 103/390 (26%), Gaps = 123/390 (31%)

Query: 162 ELGAHTLVCTALYSDGEGERKYLPQF-----FKFIVSNPLSVRTKVRVVK--VGATHFQE 214
           E G H      + S       +   F      K +   P S+ +K   +   + +     
Sbjct: 10  ETGEHQYQYKDILSV------FEDAFVDNFDCKDVQDMPKSILSK-EEIDHIIMSKDAVS 62

Query: 215 IT-FLEACIENHTKSNLYMDQVE--FEPSQNWSATMLKAD-----GPHSDYNAQ------ 260
            T  L   + +  +  +    VE     +  +  + +K +          Y  Q      
Sbjct: 63  GTLRLFWTLLSK-QEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYN 121

Query: 261 SREIFKP-----PVLIRSGGGIHNYLYQLK---------MLSHGSSSPVK--VQGSNVLG 304
             ++F                +   L +L+         +L  G +           V  
Sbjct: 122 DNQVFAKYNVSRLQPYLK---LRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQC 178

Query: 305 KL--QITWRTNLGEPGR----LQTQQILGTTIT---------SKEIELNVVEV------- 342
           K+  +I W  NL         L+  Q L   I          S  I+L +  +       
Sbjct: 179 KMDFKIFW-LNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRL 237

Query: 343 ------------------PSVVGIDKPFLLKLK--LT----NQTDKEQGPFEIWLSQNDS 378
                                      F L  K  LT      TD         +S +  
Sbjct: 238 LKSKPYENCLLVLLNVQNAKAW---NAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHH 294

Query: 379 ------DEEKVVMIN--GLRIMALAPVEAFGSTDFHLNLIATKL--GVQRITGI--TVFD 426
                 DE K +++     R   L P E   +    L++IA  +  G+           D
Sbjct: 295 SMTLTPDEVKSLLLKYLDCRPQDL-PREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCD 353

Query: 427 KLEKI---TYDSLP---------DLEIFVD 444
           KL  I   + + L           L +F  
Sbjct: 354 KLTTIIESSLNVLEPAEYRKMFDRLSVFPP 383

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.5 bits (99), Expect = 3e-04
 Identities = 37/267 (13%), Positives = 72/267 (26%), Gaps = 60/267 (22%)

Query: 6   GTHSLAFRVMRLCR-PSLHVEPPLRVDPTDLF---IGEDIFDDPIAA--SNLPPLISSDV 59
           G   +A  V   C    +  +   ++     F   +      + +      L   I  + 
Sbjct: 162 GKTWVALDV---CLSYKVQCKMDFKI-----FWLNLKNCNSPETVLEMLQKLLYQIDPNW 213

Query: 60  TTNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRD 119
           T+        + R  +H       L  LL                 Y     +  L + +
Sbjct: 214 TSRSDHSSNIKLR--IHSIQAE--LRRLLKSKP-------------Y----ENCLLVLLN 252

Query: 120 V----VIKA-EIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELG-AHTLVCTAL 173
           V       A  +     +ILL    K   + + A       ++H    L           
Sbjct: 253 VQNAKAWNAFNLSC---KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLK 309

Query: 174 YSDGEGERKYLPQFFKFIVSNPLSVRTKVRVVKVGATHFQE---------ITFLEACIEN 224
           Y D   +   LP+       NP  +      ++ G   +            T +E+ +  
Sbjct: 310 YLDCRPQD--LPREVLTT--NPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNV 365

Query: 225 HTKS---NLYMDQVEFEPSQNWSATML 248
              +    ++     F PS +    +L
Sbjct: 366 LEPAEYRKMFDRLSVFPPSAHIPTILL 392

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	446
2xzz_A	102	Protein-glutamine gamma-glutamyltransferase K; 2.3	96.71
1ex0_A	731	Coagulation factor XIII A chain; transglutaminase,	95.97
3hrz_B	252	Cobra venom factor; serine protease, glycosilated,	95.52
3idu_A	127	Uncharacterized protein; all beta-protein, structu	93.94
1vjj_A	692	Protein-glutamine glutamyltransferase E; transglut	93.79
1g0d_A	695	Protein-glutamine gamma-glutamyltransferase; tissu	93.11
2q3z_A	687	Transglutaminase 2; transglutaminase 2, tissue tra	92.35
2qsv_A	220	Uncharacterized protein; MCSG, structural genomics	89.43
2ys4_A	122	Hydrocephalus-inducing protein homolog; hydin, PAP	89.34
4fxk_B	767	Complement C4-A alpha chain; immune system, proteo	89.17
4acq_A	1451	Alpha-2-macroglobulin; hydrolase inhibitor, protei	88.06
2hr0_B	915	Complement C3 alpha' chain; complement component C	87.89
3prx_B	1642	Cobra venom factor; immune system, complement, imm	87.8
3es6_B	118	Prolactin-inducible protein; major histocompatibil	86.88
2b39_A	1661	C3; thioester, immune defense, immune system; HET:	85.96
2xzz_A	102	Protein-glutamine gamma-glutamyltransferase K; 2.3	85.79
2pn5_A	1325	TEP1R, thioester-containing protein I; FULL-length	85.61
2ys4_A	122	Hydrocephalus-inducing protein homolog; hydin, PAP	81.88
1vjj_A	692	Protein-glutamine glutamyltransferase E; transglut	80.67
2l0d_A	114	Cell surface protein; structural genomics, northea	80.58
1ex0_A	731	Coagulation factor XIII A chain; transglutaminase,	80.21

>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}

Probab=96.71  E-value=0.0038  Score=51.66  Aligned_cols=73  Identities=5%  Similarity=0.138  Sum_probs=60.5

Q ss_pred             ecCceEeeCCcEEEEEEEEeCCCCCcccEEEEEeeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEecccceEEeC
Q 013275          341 EVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRIT  420 (446)
Q Consensus       341 ~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl~~Glq~is  420 (446)
                      +++...++++++.+++.++|--...+....+.++...      + ..+ ....++.+.||++..+.+.+.|..+|.++|-
T Consensus        11 ~v~g~~~v~~~l~v~vsf~NPL~~~L~~c~~~vEG~G------L-~~~-~~~~~~~v~pg~~~~~~~~~~P~~~G~~~L~   82 (102)
T 2xzz_A           11 TLLGAAVVGQECEVQIVFKNPLPVTLTNVVFRLEGSG------L-QRP-KILNVGDIGGNETVTLRQSFVPVRPGPRQLI   82 (102)
T ss_dssp             EESSCCCSSSCEEEEEEEECCSSSCBCSEEEEEEETT------T-EEE-EEEEECCBCTTCEEEEEEEECCCSCSSCCCE
T ss_pred             EECCCcccCCeEEEEEEEECCCCCcccCEEEEEECCC------C-Ccc-eEEEcCcCCCCCEEEEEEEEecCcccceEEE
Confidence            4566668999999999999997777777888998753      2 344 5567899999999999999999999998874


Q ss_pred             c
Q 013275          421 G  421 (446)
Q Consensus       421 g  421 (446)
                      .
T Consensus        83 a   83 (102)
T 2xzz_A           83 A   83 (102)
T ss_dssp             E
T ss_pred             E
Confidence            3

>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A

Probab=95.97  E-value=0.19  Score=54.69  Aligned_cols=228  Identities=10%  Similarity=0.027  Sum_probs=126.8

Q ss_pred             EEEEEEccccCceEEEEEE----------EEEcCCC---ceeeeceEEEEEe------------ecCeEEEEEeEEcccc
Q 013275          154 FIVEHDVKELGAHTLVCTA----------LYSDGEG---ERKYLPQFFKFIV------------SNPLSVRTKVRVVKVG  208 (446)
Q Consensus       154 ~iv~~~lke~G~h~L~c~V----------sY~~~~G---e~~~frK~fkF~v------------~~Pl~VrtK~~~~~~~  208 (446)
                      ..++.+-+.+|..|..=+|          .|.-+.|   |+..|.|..++..            ..++.++-|.-.+   
T Consensus       451 ~~~~~~t~~VG~~ISTKaVG~d~ReDIT~~YKypEGS~eER~~~~kA~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~---  527 (731)
T 1ex0_A          451 VVENVDATHIGKLIVTKQIGGDGMMDITDTYKFQEGQEEERLALETALMYGAKKPLNTSRSMKSRSNVDMDFEVENA---  527 (731)
T ss_dssp             EEEEEECSSTTCEEEEECSSSSCEEECHHHHCCCTTSHHHHHHHHHHHTTTCBCCSCCCCC-----CEEEEEEECCC---
T ss_pred             EEEeeccccccceEeccCCCCCCcccccccCcCCCCCHHHHHHHHHHHhhcccccccccccccCCCCeEEEEecCCC---
Confidence            3567777888888877666          5555554   2233333222100            1234444443212   


Q ss_pred             ccccCCeeEEEEEEEecccccEEEEeEEeeecC-CceeeeecCCCCCCCCCccccccc-CCceEEeCCCCeeeEEEEEee
Q 013275          209 ATHFQEITFLEACIENHTKSNLYMDQVEFEPSQ-NWSATMLKADGPHSDYNAQSREIF-KPPVLIRSGGGIHNYLYQLKM  286 (446)
Q Consensus       209 ~~~~~~~~~LEaqiqN~s~~~l~le~v~Lep~~-~~~~~~ln~~~~~~~~~~~~~~~~-~~~~l~~~~gd~~q~lf~l~~  286 (446)
                        ...+++-|-+.|.|.|+..-. -++.|.... -|+-..             ...+. ..-.+-++|++....-..|..
T Consensus       528 --~iG~df~v~l~~~N~s~~~~~-v~~~l~a~~v~YtG~~-------------~~~~~~~~~~~~L~p~~~~~i~~~i~y  591 (731)
T 1ex0_A          528 --VLGKDFKLSITFRNNSHNRYT-ITAYLSANITFYTGVP-------------KAEFKKETFDVTLEPLSFKKEAVLIQA  591 (731)
T ss_dssp             --BTTCCEEEEEEEEECSSSCEE-EEEEEEEEEECTTSCE-------------EEEEEEEEEEEEECTTEEEEEEEEECH
T ss_pred             --CCCCCEEEEEEEEECCCCCEE-EEEEEEEEEEeeCCcc-------------ccceeEeeEEEEECCCceEEEEEEECH
Confidence              135688899999999987632 122222111 111100             00011 111344667777777666666


Q ss_pred             cCCCCCCCccccCceeeEEEEEEEEcCCCCCceeeEEeeeee-cCcCCCeEEEEEecCceEeeCCcEEEEEEEEeCCCCC
Q 013275          287 LSHGSSSPVKVQGSNVLGKLQITWRTNLGEPGRLQTQQILGT-TITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKE  365 (446)
Q Consensus       287 ~~~~~~~~~~~~g~~~lGkL~I~WRs~~Ge~G~L~Ts~l~~~-~~~~~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~  365 (446)
                      ..-.. + ...+...  =-.-+..-...++.-.   .  ++. .....+|.|.+.   ...++++++.+++.++|--..+
T Consensus       592 ~~Y~~-~-L~d~~~i--~~~a~~~v~et~~~~~---~--~~di~l~~P~l~I~v~---g~~~v~~~l~v~vsf~NPL~~~  659 (731)
T 1ex0_A          592 GEYMG-Q-LLEQASL--HFFVTARINETRDVLA---K--QKSTVLTIPEIIIKVR---GTQVVGSDMTVTVQFTNPLKET  659 (731)
T ss_dssp             HHHTT-T-CCTTCEE--EEEEEEEETTTCCEEE---E--EEEEECBCCCCEEEEE---ECCBTTSCEEEEEEEECCSSSC
T ss_pred             HHHhh-h-ccCCCEE--EEEEEEEECCCCeEEE---E--EEEEEEeCCCEEEEeC---CCcccCCeEEEEEEEECCCCCc
Confidence            53321 1 1111111  1112222232222111   1  222 245556766654   4457899999999999997777


Q ss_pred             cccEEEEEeeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEecccceEEeC
Q 013275          366 QGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRIT  420 (446)
Q Consensus       366 ~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl~~Glq~is  420 (446)
                      +..-.+.++...      + ..+ ....++.|.||++..+.+.+.|..+|.++|-
T Consensus       660 L~~c~~~vEG~G------L-~~~-~~~~~~~v~pg~~~~~~~~~~P~~~G~r~L~  706 (731)
T 1ex0_A          660 LRNVWVHLDGPG------V-TRP-MKKMFREIRPNSTVQWEEVCRPWVSGHRKLI  706 (731)
T ss_dssp             EEEEEEEEEETT------T-EEE-EEEEEEEECTTCEEEEEEEECCSSCEEEEEE
T ss_pred             ccceEEEEECCC------C-Cce-eeEecCccCCCCEEEEEEEEEeccccceEEE
Confidence            776888887752      2 233 5577899999999999999999999999974

>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*

Probab=95.52  E-value=0.049  Score=52.02  Aligned_cols=86  Identities=13%  Similarity=0.175  Sum_probs=66.9

Q ss_pred             ecCcCCCeEEEEEecCceEeeCCcEEEEEEEEeCCCCCcccEEEEEeeCCCCCcceEEEeccc---ceeecccCCCCeeE
Q 013275          328 TTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLR---IMALAPVEAFGSTD  404 (446)
Q Consensus       328 ~~~~~~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s---~~~Lg~L~P~~s~~  404 (446)
                      .....+++-+. .++|-.++-++-|.+.+.|.|+.+..+. +.+.|..+     +++...+..   ..+--.|.++++..
T Consensus        75 ~i~v~kpffv~-~~LP~sv~rGE~~~l~~~V~Ny~~~~~~-v~V~l~~~-----~~~~~~~~~~~~~~~~v~v~a~~~~~  147 (252)
T 3hrz_B           75 EIRVMKVFFID-LQMPYSVVKNEQVEIRAILHNYVNEDIY-VRVELLYN-----PAFCSASTKGQRYRQQFPIKALSSRA  147 (252)
T ss_dssp             EEEBCCSEEEE-ECCCSCEETTCCEEEEEEEEECSSSCEE-EEEEECCC-----TTEEESCCSSCCEEEEEEECTTEEEE
T ss_pred             eEEEECCEEEE-cCCCcEEeeCCEEEEEEEEEcccCceEE-EEEEEEcC-----CceEeecCCCCceEEEEEECCCCeEE
Confidence            34567777555 5899999999999999999999998887 77777664     356665432   11222689999999


Q ss_pred             EEEEEEecccceEEeC
Q 013275          405 FHLNLIATKLGVQRIT  420 (446)
Q Consensus       405 ~~L~l~pl~~Glq~is  420 (446)
                      +.|.+.|...|.+.|.
T Consensus       148 v~f~i~p~~~G~~~i~  163 (252)
T 3hrz_B          148 VPFVIVPLEQGLHDVE  163 (252)
T ss_dssp             EEEEEEECSSEEEEEE
T ss_pred             EEEEEEeccCCcEEEE
Confidence            9999999999987764

>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A

Probab=93.94  E-value=0.59  Score=39.91  Aligned_cols=81  Identities=15%  Similarity=0.206  Sum_probs=61.3

Q ss_pred             CcCCCeEEEEEecCceEeeCCcEEEEEEEEeCCCCCcccEEEEEeeCCCCCcceEEEecccceeecccCCCCeeEEEEEE
Q 013275          330 ITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNL  409 (446)
Q Consensus       330 ~~~~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l  409 (446)
                      ....||.+.+ ..|+.+..+++.+++++|+|.-......+.|.+--+.      - ..+..  .. .|.||++.++.++.
T Consensus        14 ~~~pDL~V~i-s~P~~v~~G~~~ti~vtV~N~G~~~a~~~~V~lyvng------~-~v~t~--~v-~La~G~s~tv~f~~   82 (127)
T 3idu_A           14 FEFPDLTVEI-KGPDVVGVNKLAEYEVHVKNLGGIGVPSTKVRVYING------T-LYKNW--TV-SLGPKEEKVLTFNW   82 (127)
T ss_dssp             CSSCCEEEEE-ESCSEECTTCCEEEEEEEEECSSSCEEEEEEEEEETT------E-EEEEE--EE-EECTTCEEEEEEEE
T ss_pred             ccCCCeEEEe-cCCCcccCCCEEEEEEEEEECCCCccCCcEEEEEECC------E-EEeeE--Ee-ccCCCCeEEEEEEE
Confidence            6678888855 5899999999999999999996665555777765542      1 22322  23 38999999999999


Q ss_pred             EecccceEEeCc
Q 013275          410 IATKLGVQRITG  421 (446)
Q Consensus       410 ~pl~~Glq~isg  421 (446)
                      -|...|-+.|..
T Consensus        83 ~~~~~G~~~v~A   94 (127)
T 3idu_A           83 TPTQEGMYRINA   94 (127)
T ss_dssp             CCSSCEEEEEEE
T ss_pred             EcCCCcEEEEEE
Confidence            998888777654

>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*

Probab=93.79  E-value=0.095  Score=56.71  Aligned_cols=174  Identities=9%  Similarity=0.153  Sum_probs=102.6

Q ss_pred             CCeeEEEEEEEecccccEEEEeEEeeecCCceeeeecCCCCCCCCCccccccc-CCceEEeCCCCeeeEEEEEeecCCCC
Q 013275          213 QEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGPHSDYNAQSREIF-KPPVLIRSGGGIHNYLYQLKMLSHGS  291 (446)
Q Consensus       213 ~~~~~LEaqiqN~s~~~l~le~v~Lep~~~~~~~~ln~~~~~~~~~~~~~~~~-~~~~l~~~~gd~~q~lf~l~~~~~~~  291 (446)
                      .+++-|-+.+.|.|+..-   .+.+...    +..+--.+   ..   ...+. ..-.+.++|++....-..|....-..
T Consensus       495 G~df~v~l~~~N~s~~~~---~v~~~l~----a~~v~YtG---~~---~~~~~~~~~~v~L~p~~~~~i~~~i~y~~Y~~  561 (692)
T 1vjj_A          495 GKEVNLVLLLKNLSRDTK---TVTVNMT----AWTIIYNG---TL---VHEVWKDSATMSLDPEEEAEHPIKISYAQYER  561 (692)
T ss_dssp             TSCEEEEEEEEECSSSCE---EEEEEEE----EEEECTTC---CE---EEEEEEEEEEEEECTTCEEEEEEEECHHHHHT
T ss_pred             CCCEEEEEEEEECCCCCE---EEEEEEE----EEEEeeCC---cc---ccceEEeeEEEEECCCceEEEEEEECHHHHhh
Confidence            568899999999998763   2333211    11110000   00   00011 11234466777777766666653211


Q ss_pred             CCCccccCceeeEEE-EEEEEcCCCCCceeeEEeeeee-cCcCCCeEEEEEecCceEeeCCcEEEEEEEEeCCCCCcccE
Q 013275          292 SSPVKVQGSNVLGKL-QITWRTNLGEPGRLQTQQILGT-TITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPF  369 (446)
Q Consensus       292 ~~~~~~~g~~~lGkL-~I~WRs~~Ge~G~L~Ts~l~~~-~~~~~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l  369 (446)
                       . ...++.  | ++ -+..-...++   +..   ++. .....+|.|.   ++...++++++.+++.++|--..++..-
T Consensus       562 -~-L~d~~~--i-~~~a~~~v~et~~---~~~---~~di~l~~P~l~I~---v~g~~~v~~~l~v~v~f~NPL~~~L~~c  627 (692)
T 1vjj_A          562 -Y-LKSDNM--I-RITAVCKVPDESE---VVV---ERDIILDNPTLTLE---VLNEARVRKPVNVQMLFSNPLDEPVRDC  627 (692)
T ss_dssp             -T-CCTTCE--E-EEEEEEECTTSCC---EEE---EEEEECBCCCEEEE---ECSCCBTTSCEEEEEEEECCSSSCBCSE
T ss_pred             -h-cccCCe--E-EEEEEEEECCCce---EEE---EEEEEEcCCCEEEE---eCCCcccCCeEEEEEEEECCCCCcccce
Confidence             0 111111  1 22 2223233333   221   222 2445566555   4566789999999999999977777768


Q ss_pred             EEEEeeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEecccceEEeC
Q 013275          370 EIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRIT  420 (446)
Q Consensus       370 ~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl~~Glq~is  420 (446)
                      .+.++...      + ..+.....++.|.||++..+.+.+.|..+|.++|-
T Consensus       628 ~~~vEG~G------L-~~~~~~~~~~~v~pg~~~~~~~~~~P~~~G~r~L~  671 (692)
T 1vjj_A          628 VLMVEGSG------L-LLGNLKIDVPTLGPKERSRVRFDILPSRSGTKQLL  671 (692)
T ss_dssp             EEEEECTT------T-SSSCEEEEECCBCTTCEEEEEEEECCCSCEEEEEE
T ss_pred             EEEEECCC------C-CCCceEEEcCccCCCCEEEEEEEEEeccccceEEE
Confidence            88887753      1 23555667899999999999999999999999974

>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4

Probab=93.11  E-value=0.19  Score=54.36  Aligned_cols=80  Identities=15%  Similarity=0.238  Sum_probs=64.1

Q ss_pred             CcCCCeEEEEEecCceEeeCCcEEEEEEEEeCCCCCcccEEEEEeeCCCCCcceEEEecccceee-cccCCCCeeEEEEE
Q 013275          330 ITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMAL-APVEAFGSTDFHLN  408 (446)
Q Consensus       330 ~~~~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~L-g~L~P~~s~~~~L~  408 (446)
                      ....+|.|   +++...++++|+.+++.++|--..++....+.++...      + ..+ ....+ +.|.||++..+.+.
T Consensus       582 l~~P~l~I---~v~g~~~v~~~l~a~vsf~NPL~~~L~~c~~~vEG~G------L-~~~-~~~~~~~~v~Pg~~~~~~~~  650 (695)
T 1g0d_A          582 LSTPELLV---QVPGKAVVWEPLTAYVSFTNPLPVPLKGGVFTLEGAG------L-LSA-TQIHVNGAVAPSGKVSVKLS  650 (695)
T ss_dssp             CBCCCCEE---ECCSCEETTCCEEEEEEEECCSSSCEESCEEEEEETT------T-EEE-EEEECSSEECTTCEEEEEEE
T ss_pred             EcCCCEEE---EeCCCcccCCeEEEEEEEECCCCCcccceEEEEECCC------C-Ccc-eEEecCCCcCCCCEEEEEEE
Confidence            44555544   4677889999999999999997777776888888752      2 233 45667 89999999999999


Q ss_pred             EEecccceEEeC
Q 013275          409 LIATKLGVQRIT  420 (446)
Q Consensus       409 l~pl~~Glq~is  420 (446)
                      +.|..+|.++|-
T Consensus       651 ~~P~~~G~r~L~  662 (695)
T 1g0d_A          651 FSPMRTGVRKLL  662 (695)
T ss_dssp             ECCSSCEEEEEE
T ss_pred             EEcCCccceEEE
Confidence            999999999974

>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*

Probab=92.35  E-value=0.18  Score=54.55  Aligned_cols=81  Identities=12%  Similarity=0.261  Sum_probs=63.3

Q ss_pred             CcCCCeEEEEEecCceEeeCCcEEEEEEEEeCCCCCcccEEEEEeeCCCCCcceEEEecccceee-cccCCCCeeEEEEE
Q 013275          330 ITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMAL-APVEAFGSTDFHLN  408 (446)
Q Consensus       330 ~~~~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~L-g~L~P~~s~~~~L~  408 (446)
                      ....+|.|.+   |...++++++.+++.++|--+.++..-.+.++...      + ..+.....+ +.|.||++..+.+.
T Consensus       584 l~~P~l~I~v---~g~~~v~~~~~v~v~f~NPL~~~L~~c~~~vEG~G------L-~~~~~~~~~~~~v~pg~~~~~~~~  653 (687)
T 2q3z_A          584 LENPEIKIRI---LGEPKQKRKLVAEVSLQNPLPVALEGCTFTVEGAG------L-TEEQKTVEIPDPVEAGEEVKVRMD  653 (687)
T ss_dssp             CBCCCCEEEE---ESCCSSSSCEEEEEEEECCSSSCBCSEEEEEECTT------T-CSSCEEEEECSCBCTTCEEEEEEE
T ss_pred             EeCCCEEEEe---CCCcccCCeEEEEEEEECCCCCcccceEEEEECCC------C-CCCceEEecCCCcCCCCEEEEEEE
Confidence            4455676665   45557899999999999997777776888887753      1 233344567 89999999999999


Q ss_pred             EEecccceEEeC
Q 013275          409 LIATKLGVQRIT  420 (446)
Q Consensus       409 l~pl~~Glq~is  420 (446)
                      +.|..+|.++|-
T Consensus       654 ~~P~~~G~~~L~  665 (687)
T 2q3z_A          654 LVPLHMGLHKLV  665 (687)
T ss_dssp             ECCCSSSCEEEE
T ss_pred             EEeccccceEEE
Confidence            999999999974

>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}

Probab=89.43  E-value=9  Score=35.11  Aligned_cols=130  Identities=12%  Similarity=0.090  Sum_probs=82.2

Q ss_pred             cccceeecceEEEEEEEEcCCCcceEEEEEEEEEeCCCceEeccCCCCCCccccCCCCeeeEEEEEEcccc---CceEEE
Q 013275           93 AFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKEL---GAHTLV  169 (446)
Q Consensus        93 sfG~iylGEtFs~~i~v~N~s~~~v~~V~ikaelqT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~~~lke~---G~h~L~  169 (446)
                      .||.+-.|+.=...+.+.|..+++++=..++    .++- ... .   .....|+||++-+..+.|+-+..   |.+.=.
T Consensus        11 dFg~v~~g~~~~~~~~i~N~g~~pl~i~~~~----~p~~-~~~-~---~~~~~I~PG~~g~I~vt~~~~~~~~~G~~~~~   81 (220)
T 2qsv_A           11 LFPISMPEDEGVVRLVVNNTDESDLQVAVVS----LPSF-VSL-D---DRAFRLQAREPRELNLSLAVPRNMPPGMKDEP   81 (220)
T ss_dssp             ECCSBCTTCCCEEEEEEEECSSSCEEEEEEE----CCTT-EEC-S---CCEEEECSSSCEEEEEEECCCTTCCSEEEEEE
T ss_pred             EcccccCCCcceEEEEEEeCCCCceEEEecc----CCCc-eEe-e---eCcceeCCCCceEEEEEEcchhcccCCceeeE
Confidence            6999999999999999999999888755442    2222 222 1   12357999999999999999886   656555


Q ss_pred             EEEEEEcC-CCceeeeceEEEEEeec----------C-eEEE--EEeEEccccccccCCeeEEEEEEEecccccEEEEeE
Q 013275          170 CTALYSDG-EGERKYLPQFFKFIVSN----------P-LSVR--TKVRVVKVGATHFQEITFLEACIENHTKSNLYMDQV  235 (446)
Q Consensus       170 c~VsY~~~-~Ge~~~frK~fkF~v~~----------P-l~Vr--tK~~~~~~~~~~~~~~~~LEaqiqN~s~~~l~le~v  235 (446)
                      ++|...++ +++...-+=..+-.+..          | +.+.  ..|..+     . ....--+..+.|++..||.|.++
T Consensus        82 i~v~~~~~~~~~~~~~~i~v~g~v~p~~~~~~~~~~~~i~~~~~~dfG~i-----~-g~~~~~~f~i~N~G~~pL~I~~v  155 (220)
T 2qsv_A           82 LVLEVTSPETGKKAVDSVMVSLPLVDNFPALTAAQTGVMELSTYLDMGQL-----D-GETTKAAIEIRNVGAGPLRLHSV  155 (220)
T ss_dssp             EEEEEECTTTCCEEEEEEEEEEEECCCGGGCCGGGCCCEECCCEEEEEEC-----T-TSCEEEEEEEEECSSSCEEEEEE
T ss_pred             EEEEEEcCCCCcccccEEEEEEEEcccchhhhhccCCEEEEEeEEeeecc-----C-CCeEEEEEEEEECCCCCEEEEEE
Confidence            66666542 22311111112222221          1 2222  122222     2 45556689999999999999988


Q ss_pred             Ee
Q 013275          236 EF  237 (446)
Q Consensus       236 ~L  237 (446)
                      .-
T Consensus       156 ~~  157 (220)
T 2qsv_A          156 TT  157 (220)
T ss_dssp             EE
T ss_pred             Ee
Confidence            53

>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=89.34  E-value=2  Score=35.71  Aligned_cols=86  Identities=15%  Similarity=0.244  Sum_probs=64.8

Q ss_pred             CCccCCCCcccccc--cccceeecceEEEEEEEEcCCCcceEEEEEEEEEeCCCceEeccCCCCCCccccCCCCeeeEEE
Q 013275           79 ADSIGLSGLLVLPQ--AFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIV  156 (446)
Q Consensus        79 ~~~~~~~~~L~LP~--sfG~iylGEtFs~~i~v~N~s~~~v~~V~ikaelqT~s~r~~L~~~~~~~~~~L~pg~~ld~iv  156 (446)
                      ..+.+.-+.|.+|+  .||..-+|++=...|.+.|.+..+++   ++  +..++ ......    ....|.||+..+..|
T Consensus        17 l~a~~~~~~l~~p~~l~fg~~~v~~~~~~~~~l~N~g~~~~~---f~--~~~~~-~F~i~P----~~g~L~pg~~~~i~V   86 (122)
T 2ys4_A           17 IKARGARAILDFPDKLNFSTCPVKYSTQKILLVRNIGNKNAV---FH--IKTCR-PFSIEP----AIGTLNVGESMQLEV   86 (122)
T ss_dssp             SCCCSCCCCCCCCSEECCCSEESSSCEEEEEEEECCSSSCEE---EE--EECCT-TEEEES----SEEEECTTCEEEEEE
T ss_pred             EEEEcCCcEECCCCeeecCCeecCCeEEEEEEEEECCCCCEE---EE--EecCC-CeEEEC----CcCEECCCCEEEEEE
Confidence            44556667888885  89999999999999999999887654   22  33322 333322    147899999999999


Q ss_pred             EEEccccCceEEEEEEEE
Q 013275          157 EHDVKELGAHTLVCTALY  174 (446)
Q Consensus       157 ~~~lke~G~h~L~c~VsY  174 (446)
                      .|.=++.|.|.-...+.|
T Consensus        87 ~F~P~~~g~~~~~l~v~~  104 (122)
T 2ys4_A           87 EFEPQSVGDHSGRLIVCY  104 (122)
T ss_dssp             EECCSSSBCCCCBCEEEE
T ss_pred             EEEcCCCccEEEEEEEEE
Confidence            999999999976666666

>4fxk_B Complement C4-A alpha chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_B*

Probab=89.17  E-value=0.49  Score=51.95  Aligned_cols=84  Identities=17%  Similarity=0.153  Sum_probs=65.9

Q ss_pred             cCcCCCeEEEEEecCceEeeCCcEEEEEEEEeCCCCCcccEEEEEeeCCCCCcceEEEeccc--ceeecccCCCCeeEEE
Q 013275          329 TITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLR--IMALAPVEAFGSTDFH  406 (446)
Q Consensus       329 ~~~~~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s--~~~Lg~L~P~~s~~~~  406 (446)
                      ....+++-+. .++|-+++.++-|.+.+.|.|+++..+. +.|.|...     +++...+..  ...+ .|.++++..+.
T Consensus       148 ~~v~kpf~v~-~~lP~~v~~GD~~~i~~~V~N~~~~~~~-v~v~l~~~-----~~~~~~~~~~~~~~~-~v~a~~~~~v~  219 (767)
T 4fxk_B          148 LRVFREFHLH-LRLPMSVRRFEQLELRPVLYNYLDKNLT-VSVHVSPV-----EGLCLAGGGGLAQQV-LVPAGSARPVA  219 (767)
T ss_dssp             EECCCSEEEE-CCCCSCEETTCEEEECCEEEECSSSCEE-EEEEECCC-----TTEECSSSSCCCEEE-EECSSCEEECC
T ss_pred             EEEeccEEEe-cCCCCeeccCCEEEEEEEEEECCCCCEE-EEEEEEec-----CCeEEecCCceeEEE-EEcCCCeEEEE
Confidence            3456666444 5899999999999999999999999887 78888664     356555432  2333 58999999999


Q ss_pred             EEEEecccceEEeC
Q 013275          407 LNLIATKLGVQRIT  420 (446)
Q Consensus       407 L~l~pl~~Glq~is  420 (446)
                      |.+.|...|.+.|.
T Consensus       220 f~i~~~~~G~~~i~  233 (767)
T 4fxk_B          220 FSVVPTAAAAVSLK  233 (767)
T ss_dssp             EEEEECSCSEEEEE
T ss_pred             EEEEECccCcEEEE
Confidence            99999999998874

>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}

Probab=88.06  E-value=3.1  Score=49.12  Aligned_cols=84  Identities=15%  Similarity=0.106  Sum_probs=65.4

Q ss_pred             cCcCCCeEEEEEecCceEeeCCcEEEEEEEEeCCCCCcccEEEEEeeCCCCCcceEEEeccc--ceeecccCCCCeeEEE
Q 013275          329 TITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLR--IMALAPVEAFGSTDFH  406 (446)
Q Consensus       329 ~~~~~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s--~~~Lg~L~P~~s~~~~  406 (446)
                      ....+++-+. .++|-++.-++-|.+.+.|.|+.+..+. +.|.|..+     +++.+.+..  ...+ .|.++++..+.
T Consensus       763 v~v~kpf~v~-~~LP~sv~rGE~~~l~~~V~N~~~~~~~-v~V~l~~~-----~~~~~~~~~~~~~~v-~l~~~~~~~v~  834 (1451)
T 4acq_A          763 LRAFQPFFVE-LTMPYSVIRGEAFTLKATVLNYLPKCIR-VSVQLEAS-----PAFLAVPVEKEQAPH-CICANGRQTVS  834 (1451)
T ss_dssp             ECCBCSEEEE-EECCSEEESSSCEEEEEEEEECSSSCEE-EEEEECCC-----TTEEEEESCSCCCCE-EECTTEEEEEE
T ss_pred             EEEECCEEEE-ccCCceEecCCEEEEEEEEEeccCccEE-EEEEEEcC-----CCeEeecCCCCceEE-EECCCCeEEEE
Confidence            4455666444 5899999999999999999999998877 77777654     356665532  2333 57999999999


Q ss_pred             EEEEecccceEEeC
Q 013275          407 LNLIATKLGVQRIT  420 (446)
Q Consensus       407 L~l~pl~~Glq~is  420 (446)
                      |.+.|...|.+.|.
T Consensus       835 f~v~p~~~G~~~i~  848 (1451)
T 4acq_A          835 WAVTPKSLGNVNFT  848 (1451)
T ss_dssp             EEEEECSCEEEEEE
T ss_pred             EEEEECccceEEEE
Confidence            99999999987763

>2hr0_B Complement C3 alpha' chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2icf_B* 2wii_B* 2win_B* 3g6j_B 3l5n_B* 2a73_B* 2i07_B* 2xwj_B* 2xwb_B* 2a74_C* 2ice_C* 2qki_C* 3l3o_F* 3nms_C* 3nsa_C* 3ohx_C* 3t4a_C 2ice_B* 3l3o_B* 3nms_B* ...

Probab=87.89  E-value=1.6  Score=48.94  Aligned_cols=84  Identities=13%  Similarity=0.161  Sum_probs=65.0

Q ss_pred             cCcCCCeEEEEEecCceEeeCCcEEEEEEEEeCCC-CCcccEEEEEeeCCCCCcceEEEecc----cceeecccCCCCee
Q 013275          329 TITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTD-KEQGPFEIWLSQNDSDEEKVVMINGL----RIMALAPVEAFGST  403 (446)
Q Consensus       329 ~~~~~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~-r~~~~l~l~l~~~~~~~~~~~~~~G~----s~~~Lg~L~P~~s~  403 (446)
                      ....+++-+. .++|-+++.++-|.+.+.|.|+++ ..+. +.|.|..+     +++...|.    ....+ .|.++++.
T Consensus        75 ~~v~kp~~v~-~~LP~~v~~GD~~~i~~~v~N~~~~~~~~-v~v~l~~~-----~~~~~~~~~~~~~~~~v-~l~~~~~~  146 (915)
T 2hr0_B           75 VTVMQDFFID-LRLPYSVVRNEQVEIRAVLYNYRQNQELK-VRVELLHN-----PAFCSLATTKRRHQQTV-TIPPKSSL  146 (915)
T ss_dssp             EEECCSSEEE-EECCSEEETTCCEEEEEEEEECCSSCCEE-EEEEECCC-----TTEECSCCSSSCEEEEE-EECTTEEE
T ss_pred             EEEeccEEEE-ccCCCEEecCcEEEEEEEEEcCCCCeeEE-EEEEEecC-----CceEeecCCCCcceeEE-EECCCCeE
Confidence            3455666444 589999999999999999999999 8877 77777654     35655542    12334 67999999


Q ss_pred             EEEEEEEecccceEEeC
Q 013275          404 DFHLNLIATKLGVQRIT  420 (446)
Q Consensus       404 ~~~L~l~pl~~Glq~is  420 (446)
                      .+.|.+.|...|.+.|.
T Consensus       147 ~v~f~i~~~~~G~~~i~  163 (915)
T 2hr0_B          147 SVPYVIVPLKTGLQEVE  163 (915)
T ss_dssp             EEEEEEEECSCEEEEEE
T ss_pred             EEEEEEEECccceEEEE
Confidence            99999999999988763

>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*

Probab=87.80  E-value=2.5  Score=50.37  Aligned_cols=81  Identities=14%  Similarity=0.200  Sum_probs=62.9

Q ss_pred             CCCeEEEEEecCceEeeCCcEEEEEEEEeCCCCCcccEEEEEeeCCCCCcceEEEecc----cceeecccCCCCeeEEEE
Q 013275          332 SKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGL----RIMALAPVEAFGSTDFHL  407 (446)
Q Consensus       332 ~~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~----s~~~Lg~L~P~~s~~~~L  407 (446)
                      .+++-+. .++|-++.-++-|.+.+.|.|+.+..+. +.|.|..+     +++...+.    ....+ .|.++++..+.|
T Consensus       811 ~kpffv~-l~LPysv~rGEq~~l~v~VfNy~~~~~~-V~V~L~~s-----~~~~~~~~~~~~~~q~v-~v~a~~~~~v~f  882 (1642)
T 3prx_B          811 MKVFFID-LQMPYSVVKNEQVEIRAILHNYVNEDIY-VRVELLYN-----PAFCSASTKGQRYRQQF-PIKALSSRAVPF  882 (1642)
T ss_dssp             CCSEEEE-CCCCSCEETTCCEEEEEEEEECSSSCEE-EEEEECCC-----TTEEESCCSSSCCEEEE-EECSSEEEEEEE
T ss_pred             ECCEEEE-ccCCCEEecCCEEEEEEEEEcCCCCcEE-EEEEEEcC-----CCeEeeccCCCcceeEE-EECCCCeEEEEE
Confidence            4444333 4799999999999999999999998887 77877664     35666653    12333 689999999999


Q ss_pred             EEEecccceEEeC
Q 013275          408 NLIATKLGVQRIT  420 (446)
Q Consensus       408 ~l~pl~~Glq~is  420 (446)
                      .+.|...|.+.|.
T Consensus       883 ~i~p~~~G~~~i~  895 (1642)
T 3prx_B          883 VIVPLEQGLHDVE  895 (1642)
T ss_dssp             EEEECSCEEEEEE
T ss_pred             EEEEeecccEEEE
Confidence            9999999988753

>3es6_B Prolactin-inducible protein; major histocompatibility complex, protein-protein complex, P inducible protein, zinc 2-glycoprotein, ZAG-PIP complex; HET: NDG NAG BMA MAN P6G; 3.23A {Homo sapiens} SCOP: b.1.18.23

Probab=86.88  E-value=1.5  Score=36.93  Aligned_cols=73  Identities=10%  Similarity=0.025  Sum_probs=53.2

Q ss_pred             EecCceEeeCCcEEEEEEEEeCCCCCcccEEEEEeeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEecccceEEe
Q 013275          340 VEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRI  419 (446)
Q Consensus       340 ~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl~~Glq~i  419 (446)
                      .++|-.+.-++-|.++..|.|+-+..|. +.+.|..+.     .|......... .-|-++...+|.|.+.|+  |-..|
T Consensus        12 l~lPysv~rgE~~~~~~~V~nyl~~~~~-v~v~L~~s~-----~~~~~~~~~~t-~Clc~~~~~t~~W~i~~l--g~vni   82 (118)
T 3es6_B           12 FDIPKSVRPNDEVTAVLAVQTELKECMV-VKTYLISSI-----PLQGAFNYKYT-ACLCDDNPKTFYWDFYTN--RTVQI   82 (118)
T ss_dssp             CCCCSEECSSCCEEEEEEEEECCSSCEE-EEEEEEESS-----CCCSGGGCEEE-EEECSSSCEEEEEEECCS--SCEEE
T ss_pred             eeCCceEecCCEEEEEEEEEecccceEE-EEEEecCCc-----CEEccCCCccc-EEecCCCceEEEEEEEeC--CeEEE
Confidence            5799999999999999999999888888 888887753     22111111111 147889999999999885  65554


Q ss_pred             Cc
Q 013275          420 TG  421 (446)
Q Consensus       420 sg  421 (446)
                      ..
T Consensus        83 Tv   84 (118)
T 3es6_B           83 AA   84 (118)
T ss_dssp             EE
T ss_pred             EE
Confidence            43

>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}

Probab=85.96  E-value=1.9  Score=51.50  Aligned_cols=81  Identities=12%  Similarity=0.177  Sum_probs=62.3

Q ss_pred             CCCeEEEEEecCceEeeCCcEEEEEEEEeCCC-CCcccEEEEEeeCCCCCcceEEEecc----cceeecccCCCCeeEEE
Q 013275          332 SKEIELNVVEVPSVVGIDKPFLLKLKLTNQTD-KEQGPFEIWLSQNDSDEEKVVMINGL----RIMALAPVEAFGSTDFH  406 (446)
Q Consensus       332 ~~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~-r~~~~l~l~l~~~~~~~~~~~~~~G~----s~~~Lg~L~P~~s~~~~  406 (446)
                      .+++-+. .++|-+++.++-|.+.+.|.|+++ ..+. +.+.|...     +++...+.    ....+ .|.++++..+.
T Consensus       825 ~kpf~v~-~~LP~sv~~GD~~~i~~~V~N~~~~~~~~-v~v~l~~~-----~~~~~~~~~~~~~~~~v-~v~a~~~~~v~  896 (1661)
T 2b39_A          825 MQDFFID-LRLPYSVVRNEQVEIRAILYNYREAENLK-VRVELLYN-----PAFCSLATAKKRHQQTI-TIPARSSVAVP  896 (1661)
T ss_dssp             CCSEEEE-EECCSCEESSCEEEEEEEEEECCTTCCEE-EEEEECCC-----TTEECSSCSSCCCEEEE-EECTTCEEEEE
T ss_pred             EeeEEEE-ecCCcEEEeCCEEEEEEEEEcCCCCccEE-EEEEEcCC-----CCeEeecCCCCcceEEE-EECCCCcEEEE
Confidence            3444333 579999999999999999999999 8877 77777654     35655543    22334 68999999999


Q ss_pred             EEEEecccceEEeC
Q 013275          407 LNLIATKLGVQRIT  420 (446)
Q Consensus       407 L~l~pl~~Glq~is  420 (446)
                      |.+.|...|.+.|.
T Consensus       897 f~i~p~~~G~~~i~  910 (1661)
T 2b39_A          897 YVIVPLKIGLHEVE  910 (1661)
T ss_dssp             EEEEECSCEEEEEE
T ss_pred             EEEEEcccCeEEEE
Confidence            99999999988763

>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}

Probab=85.79  E-value=1.8  Score=35.32  Aligned_cols=73  Identities=18%  Similarity=0.179  Sum_probs=57.8

Q ss_pred             cceeecceEEEEEEEEcCCCcceEEEEEEEEEeCCCceEeccCCCCCCccccCCCCeeeEEEEEEccccCceEEEEEEE
Q 013275           95 GAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTAL  173 (446)
Q Consensus        95 G~iylGEtFs~~i~v~N~s~~~v~~V~ikaelqT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~~~lke~G~h~L~c~Vs  173 (446)
                      |.+-+|+.+.+.+++.|--+.+++++.+.+|=--=......      ..+++.||+++...+.+-=+..|.+.|.+..+
T Consensus        14 g~~~v~~~l~v~vsf~NPL~~~L~~c~~~vEG~GL~~~~~~------~~~~v~pg~~~~~~~~~~P~~~G~~~L~a~f~   86 (102)
T 2xzz_A           14 GAAVVGQECEVQIVFKNPLPVTLTNVVFRLEGSGLQRPKIL------NVGDIGGNETVTLRQSFVPVRPGPRQLIASLD   86 (102)
T ss_dssp             SCCCSSSCEEEEEEEECCSSSCBCSEEEEEEETTTEEEEEE------EECCBCTTCEEEEEEEECCCSCSSCCCEEEEE
T ss_pred             CCcccCCeEEEEEEEECCCCCcccCEEEEEECCCCCcceEE------EcCcCCCCCEEEEEEEEecCcccceEEEEEEE
Confidence            66788999999999999999999999999873221111111      13469999999999999999999999987754

>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}

Probab=85.61  E-value=2.3  Score=49.49  Aligned_cols=74  Identities=16%  Similarity=0.146  Sum_probs=59.4

Q ss_pred             EecCceEeeCCcEEEEEEEEeCCCCCcccEEEEEeeCCCCCcceEEEeccc------ceeecccCCCCeeEEEEEEEecc
Q 013275          340 VEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLR------IMALAPVEAFGSTDFHLNLIATK  413 (446)
Q Consensus       340 ~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s------~~~Lg~L~P~~s~~~~L~l~pl~  413 (446)
                      .++|-+++.++-|.+.+.|.|+++..+. +.+.|...+    +++-++|..      ...+ .|.++++..+.|.+.|..
T Consensus       670 ~~lP~~v~~Gd~~~l~~~v~N~~~~~~~-v~v~l~~~~----~~~~~~~~~~~~~~~~~~v-~v~~~~~~~v~f~i~~~~  743 (1325)
T 2pn5_A          670 ENLPYSIKRGEAVVLQFTLFNNLGAEYI-ADVTLYNVA----NQTEFVGRPNTDLSYTKSV-SVPPKVGVPISFLIKARK  743 (1325)
T ss_dssp             EECCSEEETTCEEEEEEEEEECSSSCEE-EEEEEECGG----GCEEETTSCTTCCEEEEEE-EECTTCCEEEEEEEEECS
T ss_pred             cCCCcEEEcCCEEEEEEEEEeCCCCcEE-EEEEEeecC----CceEEeccCCCCCcceEEE-EECCCCeEEEEEEEEEcc
Confidence            5789999999999999999999999887 888886542    246666542      2334 679999999999999999


Q ss_pred             cceEEe
Q 013275          414 LGVQRI  419 (446)
Q Consensus       414 ~Glq~i  419 (446)
                      .|...|
T Consensus       744 ~G~~~i  749 (1325)
T 2pn5_A          744 LGEMAV  749 (1325)
T ss_dssp             SEEEEE
T ss_pred             cceEEE
Confidence            997766

>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=81.88  E-value=2.9  Score=34.72  Aligned_cols=70  Identities=13%  Similarity=0.131  Sum_probs=52.4

Q ss_pred             eEeeCCcEEEEEEEEeCCCCCcccEEEEEeeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEecccceEEeCceEE
Q 013275          345 VVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITV  424 (446)
Q Consensus       345 ~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl~~Glq~isgi~l  424 (446)
                      .+.++..-+.++.|+|..+.... +  .+...     ..|.+.=.    -|.|+||++..+.+++.|..+|.+.-.=+..
T Consensus        36 ~~~v~~~~~~~~~l~N~g~~~~~-f--~~~~~-----~~F~i~P~----~g~L~pg~~~~i~V~F~P~~~g~~~~~l~v~  103 (122)
T 2ys4_A           36 TCPVKYSTQKILLVRNIGNKNAV-F--HIKTC-----RPFSIEPA----IGTLNVGESMQLEVEFEPQSVGDHSGRLIVC  103 (122)
T ss_dssp             SEESSSCEEEEEEEECCSSSCEE-E--EEECC-----TTEEEESS----EEEECTTCEEEEEEEECCSSSBCCCCBCEEE
T ss_pred             CeecCCeEEEEEEEEECCCCCEE-E--EEecC-----CCeEEECC----cCEECCCCEEEEEEEEEcCCCccEEEEEEEE
Confidence            45788999999999999887655 4  44432     36888643    3788999999999999999999865444333


Q ss_pred             Ee
Q 013275          425 FD  426 (446)
Q Consensus       425 ~D  426 (446)
                      +|
T Consensus       104 ~~  105 (122)
T 2ys4_A          104 YD  105 (122)
T ss_dssp             ES
T ss_pred             EC
Confidence            34

>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*

Probab=80.67  E-value=3  Score=45.13  Aligned_cols=72  Identities=13%  Similarity=0.192  Sum_probs=53.1

Q ss_pred             CCCeEEEEEecCceEeeCCcEEEEEEEEeCCCCCcccEEEEEeeCCCCCcceEEEecccceeec------ccCCCCeeEE
Q 013275          332 SKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALA------PVEAFGSTDF  405 (446)
Q Consensus       332 ~~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg------~L~P~~s~~~  405 (446)
                      ..++.+.+ ..++.+.++++|.+.+.++|.+++... +.+.+.-      ..+.++|.....+.      .|.|+++..+
T Consensus       479 ~~~v~~~~-~~~~~~~~G~df~v~l~~~N~s~~~~~-v~~~l~a------~~v~YtG~~~~~~~~~~~~v~L~p~~~~~i  550 (692)
T 1vjj_A          479 EPSIIGKL-KVAGMLAVGKEVNLVLLLKNLSRDTKT-VTVNMTA------WTIIYNGTLVHEVWKDSATMSLDPEEEAEH  550 (692)
T ss_dssp             CCSEEEEE-EECSCCBTTSCEEEEEEEEECSSSCEE-EEEEEEE------EEECTTCCEEEEEEEEEEEEEECTTCEEEE
T ss_pred             CCCeEEEE-EcCCCCCCCCCEEEEEEEEECCCCCEE-EEEEEEE------EEEeeCCccccceEEeeEEEEECCCceEEE
Confidence            44566665 366778899999999999999888766 6666643      46777777554443      4789999999


Q ss_pred             EEEEEe
Q 013275          406 HLNLIA  411 (446)
Q Consensus       406 ~L~l~p  411 (446)
                      .+.+-+
T Consensus       551 ~~~i~y  556 (692)
T 1vjj_A          551 PIKISY  556 (692)
T ss_dssp             EEEECH
T ss_pred             EEEECH
Confidence            987644

>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}

Probab=80.58  E-value=17  Score=30.11  Aligned_cols=79  Identities=14%  Similarity=0.191  Sum_probs=56.1

Q ss_pred             CCeEEEEEecCceEeeCCcEEEEEEEEeCCCCCcccEEEEEeeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEec
Q 013275          333 KEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIAT  412 (446)
Q Consensus       333 ~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl  412 (446)
                      .||.+.-. .|+.+..+++.+|+..|+|.-......+.+.+.-+      +-.+.+   ..++.|.+|.+.++.++.-|.
T Consensus         3 PDL~vt~i-tP~~~~~~~~~ti~atVkN~G~~~a~~~~V~ly~~------g~~v~t---~~v~~LaaG~s~tv~~~w~~~   72 (114)
T 2l0d_A            3 PDLVPVSL-TPVTVVPNTVNTMTATIENQGNKDSTSFNVSLLVD------GIVVDT---QTVTSLESENSTNVDFHWTLD   72 (114)
T ss_dssp             CCEEEEEE-ECSEECTTSEEEEEEEEEECSSSCBCCEEEEEEET------TEEEEE---EEESCBCBTCEEEEEEEEECC
T ss_pred             CCcEEEec-cCCCcCCCCeEEEEEEEEECCCCCCCCEEEEEEEC------CEEEcc---eecccccCCCEEEEEEEEeec
Confidence            34544434 48889999999999999999665544466766543      222222   256679999999999988887


Q ss_pred             -ccceEEeCc
Q 013275          413 -KLGVQRITG  421 (446)
Q Consensus       413 -~~Glq~isg  421 (446)
                       ..|-+.|.-
T Consensus        73 ~~~G~ytl~a   82 (114)
T 2l0d_A           73 GTANSYTLTV   82 (114)
T ss_dssp             CSCSEEEEEE
T ss_pred             CcCceEEEEE
Confidence             478887753

>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A

Probab=80.21  E-value=2.6  Score=45.85  Aligned_cols=70  Identities=13%  Similarity=0.249  Sum_probs=51.8

Q ss_pred             CCeEEEEEecCceEeeCCcEEEEEEEEeCCCCCcccEEEEEeeCCCCCcceEEEecccceeec------ccCCCCeeEEE
Q 013275          333 KEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALA------PVEAFGSTDFH  406 (446)
Q Consensus       333 ~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg------~L~P~~s~~~~  406 (446)
                      .++.+.+..  +.+.++++|.+.+.++|.+++... +.+.+.-      ..+.++|.....+.      .|.|+++..+.
T Consensus       516 ~~v~~~i~~--~~~~iG~df~v~l~~~N~s~~~~~-v~~~l~a------~~v~YtG~~~~~~~~~~~~~~L~p~~~~~i~  586 (731)
T 1ex0_A          516 SNVDMDFEV--ENAVLGKDFKLSITFRNNSHNRYT-ITAYLSA------NITFYTGVPKAEFKKETFDVTLEPLSFKKEA  586 (731)
T ss_dssp             -CEEEEEEE--CCCBTTCCEEEEEEEEECSSSCEE-EEEEEEE------EEECTTSCEEEEEEEEEEEEEECTTEEEEEE
T ss_pred             CCeEEEEec--CCCCCCCCEEEEEEEEECCCCCEE-EEEEEEE------EEEeeCCccccceeEeeEEEEECCCceEEEE
Confidence            456677654  778899999999999999888766 6666643      46777776544433      47899999998


Q ss_pred             EEEEe
Q 013275          407 LNLIA  411 (446)
Q Consensus       407 L~l~p  411 (446)
                      +.+-+
T Consensus       587 ~~i~y  591 (731)
T 1ex0_A          587 VLIQA  591 (731)
T ss_dssp             EEECH
T ss_pred             EEECH
Confidence            87654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	446
d1vjja3	99	Transglutaminase, two C-terminal domains {Human (H	96.96
d1ex0a3	100	Transglutaminase, two C-terminal domains {Human (H	96.82
d1g0da3	101	Transglutaminase, two C-terminal domains {Red sea	96.75
d2q3za3	98	Transglutaminase, two C-terminal domains {Human (H	96.47
d1ex0a2	112	Transglutaminase, two C-terminal domains {Human (H	96.34
d1vjja2	115	Transglutaminase, two C-terminal domains {Human (H	95.95
d1g0da2	112	Transglutaminase, two C-terminal domains {Red sea	95.61
d2q3za2	114	Transglutaminase, two C-terminal domains {Human (H	95.19
d1vjja3	99	Transglutaminase, two C-terminal domains {Human (H	94.54
d2q3za3	98	Transglutaminase, two C-terminal domains {Human (H	94.52
d1g0da3	101	Transglutaminase, two C-terminal domains {Red sea	92.93
d3es6b1	118	Prolactin-inducible protein, PIP {Human (Homo sapi	92.52
d1ex0a3	100	Transglutaminase, two C-terminal domains {Human (H	91.01

>d1vjja3 b.1.5.1 (A:594-692) Transglutaminase, two C-terminal domains {Human (Homo sapiens), TGase E3 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Transglutaminase, two C-terminal domains
family: Transglutaminase, two C-terminal domains
domain: Transglutaminase, two C-terminal domains
species: Human (Homo sapiens), TGase E3 [TaxId: 9606]

Probab=96.96  E-value=0.00089  Score=53.21  Aligned_cols=75  Identities=11%  Similarity=0.252  Sum_probs=60.7

Q ss_pred             EecCceEeeCCcEEEEEEEEeCCCCCcccEEEEEeeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEecccceEEe
Q 013275          340 VEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRI  419 (446)
Q Consensus       340 ~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl~~Glq~i  419 (446)
                      .++|...++++++.++++++|--+..+.+-.+.++...      + +.+.....++.+.||++.++.+.+.|..+|.++|
T Consensus         5 I~v~~~~~v~~~~~v~vsf~NPL~~~L~~c~f~vEG~G------L-~~~~~~~~~~~v~p~~~~~~~~~~~P~~~G~~~l   77 (99)
T d1vjja3           5 LEVLNEARVRKPVNVQMLFSNPLDEPVRDCVLMVEGSG------L-LLGNLKIDVPTLGPKERSRVRFDILPSRSGTKQL   77 (99)
T ss_dssp             EEECSCCBTTSCEEEEEEEECCSSSCBCSEEEEEECTT------T-SSSCEEEEECCBCTTCEEEEEEEECCCSCEEEEE
T ss_pred             EEeCCCcCcCCeEEEEEEEECCCCCchhCEEEEEEeCC------C-CCccEEEecCccCCCCEEEEEEEEEcCCcccEEE
Confidence            35677788999999999999998888876888887652      1 2233345688899999999999999999999997


Q ss_pred             Cc
Q 013275          420 TG  421 (446)
Q Consensus       420 sg  421 (446)
                      -.
T Consensus        78 ~a   79 (99)
T d1vjja3          78 LA   79 (99)
T ss_dssp             EE
T ss_pred             EE
Confidence            43

>d1ex0a3 b.1.5.1 (A:628-727) Transglutaminase, two C-terminal domains {Human (Homo sapiens), blood isozyme [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Transglutaminase, two C-terminal domains
family: Transglutaminase, two C-terminal domains
domain: Transglutaminase, two C-terminal domains
species: Human (Homo sapiens), blood isozyme [TaxId: 9606]

Probab=96.82  E-value=0.001  Score=52.89  Aligned_cols=78  Identities=10%  Similarity=0.062  Sum_probs=62.9

Q ss_pred             CCeEEEEEecCceEeeCCcEEEEEEEEeCCCCCcccEEEEEeeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEec
Q 013275          333 KEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIAT  412 (446)
Q Consensus       333 ~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl  412 (446)
                      .+|.+.   +|....+++++++++.++|--+..+.+..+.++..      |+.  ......++.+.||++.++.+.+.|.
T Consensus         3 P~l~I~---v~g~~~v~~~~~v~v~F~NPL~~~L~nc~~~vEG~------GL~--~~~~~~~~~v~p~~~~~~~~~~~P~   71 (100)
T d1ex0a3           3 PEIIIK---VRGTQVVGSDMTVTVQFTNPLKETLRNVWVHLDGP------GVT--RPMKKMFREIRPNSTVQWEEVCRPW   71 (100)
T ss_dssp             CCCEEE---EEECCBTTSCEEEEEEEECCSSSCEEEEEEEEEET------TTE--EEEEEEEEEECTTCEEEEEEEECCS
T ss_pred             CcEEEE---eCCCcccCCeEEEEEEEECCCCCchhCEEEEEEcC------CCc--eeeEEecCccCCCCEEEEEEEEecC
Confidence            355554   55666799999999999999888887788888775      332  3345778999999999999999999


Q ss_pred             ccceEEeCc
Q 013275          413 KLGVQRITG  421 (446)
Q Consensus       413 ~~Glq~isg  421 (446)
                      .+|.++|-.
T Consensus        72 ~~G~~~l~a   80 (100)
T d1ex0a3          72 VSGHRKLIA   80 (100)
T ss_dssp             SCEEEEEEE
T ss_pred             CcccEEEEE
Confidence            999999743

>d1g0da3 b.1.5.1 (A:584-684) Transglutaminase, two C-terminal domains {Red sea bream (Chrysophrys major) [TaxId: 143350]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Transglutaminase, two C-terminal domains
family: Transglutaminase, two C-terminal domains
domain: Transglutaminase, two C-terminal domains
species: Red sea bream (Chrysophrys major) [TaxId: 143350]

Probab=96.75  E-value=0.0021  Score=51.17  Aligned_cols=73  Identities=16%  Similarity=0.206  Sum_probs=59.5

Q ss_pred             ecCceEeeCCcEEEEEEEEeCCCCCcccEEEEEeeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEecccceEEeC
Q 013275          341 EVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRIT  420 (446)
Q Consensus       341 ~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl~~Glq~is  420 (446)
                      ++|....+++++.+++.++|--+..+.+-.+.++...      + +.+.+....+.+.||++.++.+.+.|..+|.++|-
T Consensus         7 ~v~g~~~v~~~~~v~vsf~NPL~~~L~~c~~~vEG~G------L-~~~~~~~~~~~v~p~~~~~~~~~~~P~~~G~~~L~   79 (101)
T d1g0da3           7 QVPGKAVVWEPLTAYVSFTNPLPVPLKGGVFTLEGAG------L-LSATQIHVNGAVAPSGKVSVKLSFSPMRTGVRKLL   79 (101)
T ss_dssp             ECCSCEETTCCEEEEEEEECCSSSCEESCEEEEEETT------T-EEEEEEECSSEECTTCEEEEEEEECCSSCEEEEEE
T ss_pred             EeCCCcCcCCeEEEEEEEECCCCCeecCEEEEEEcCC------C-CcccEEEecCCcCCCCEEEEEEEEEcCCcccEEEE
Confidence            4788899999999999999998888876888887752      2 22333233578999999999999999999999964

>d2q3za3 b.1.5.1 (A:586-683) Transglutaminase, two C-terminal domains {Human (Homo sapiens), tissue isozyme [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Transglutaminase, two C-terminal domains
family: Transglutaminase, two C-terminal domains
domain: Transglutaminase, two C-terminal domains
species: Human (Homo sapiens), tissue isozyme [TaxId: 9606]

Probab=96.47  E-value=0.0028  Score=50.10  Aligned_cols=78  Identities=13%  Similarity=0.244  Sum_probs=59.2

Q ss_pred             CeEEEEEecCceEeeCCcEEEEEEEEeCCCCCcccEEEEEeeCCCCCcceEEEecccceee-cccCCCCeeEEEEEEEec
Q 013275          334 EIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMAL-APVEAFGSTDFHLNLIAT  412 (446)
Q Consensus       334 dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~L-g~L~P~~s~~~~L~l~pl  412 (446)
                      ||.|.   ++...++++++.++++++|--+..+..-.+.++...      + +.+.....+ +.+.||++.++.+.+.|.
T Consensus         3 ~l~I~---v~g~~~vg~~~~v~vsF~NPL~~~L~~c~~~vEG~G------L-~~~~~~~~~~~~v~pg~~~~~~~~~~P~   72 (98)
T d2q3za3           3 EIKIR---ILGEPKQKRKLVAEVSLQNPLPVALEGCTFTVEGAG------L-TEEQKTVEIPDPVEAGEEVKVRMDLVPL   72 (98)
T ss_dssp             CCEEE---EESCCSSSSCEEEEEEEECCSSSCBCSEEEEEECTT------T-CSSCEEEEECSCBCTTCEEEEEEEECCC
T ss_pred             CeEEE---ECCCcCcCCeEEEEEEEECCCCCchhCEEEEEEcCC------c-CcCcEEEeCCCccCCCCEEEEEEEEEcC
Confidence            45444   466667999999999999998888876888887652      1 122223345 469999999999999999


Q ss_pred             ccceEEeCc
Q 013275          413 KLGVQRITG  421 (446)
Q Consensus       413 ~~Glq~isg  421 (446)
                      .+|.++|-.
T Consensus        73 ~~G~~~L~a   81 (98)
T d2q3za3          73 HMGLHKLVV   81 (98)
T ss_dssp             SSSCEEEEE
T ss_pred             CcccEEEEE
Confidence            999999743

>d1ex0a2 b.1.5.1 (A:516-627) Transglutaminase, two C-terminal domains {Human (Homo sapiens), blood isozyme [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Transglutaminase, two C-terminal domains
family: Transglutaminase, two C-terminal domains
domain: Transglutaminase, two C-terminal domains
species: Human (Homo sapiens), blood isozyme [TaxId: 9606]

Probab=96.34  E-value=0.0033  Score=50.80  Aligned_cols=70  Identities=16%  Similarity=0.295  Sum_probs=53.8

Q ss_pred             CeEEEEEecCceEeeCCcEEEEEEEEeCCCCCcccEEEEEeeCCCCCcceEEEecccceeec------ccCCCCeeEEEE
Q 013275          334 EIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALA------PVEAFGSTDFHL  407 (446)
Q Consensus       334 dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg------~L~P~~s~~~~L  407 (446)
                      |+++.+ ++ +.+.+|++|.+.+.++|+|+.... +.+.+.-      .++.|+|.....++      .|.|+++..+.+
T Consensus         2 dV~~~~-~~-~~~~iG~df~v~i~~~N~s~~~~~-v~l~l~a------~~v~YtG~~~~~~~~~~~~v~L~p~~~~~v~~   72 (112)
T d1ex0a2           2 NVDMDF-EV-ENAVLGKDFKLSITFRNNSHNRYT-ITAYLSA------NITFYTGVPKAEFKKETFDVTLEPLSFKKEAV   72 (112)
T ss_dssp             CEEEEE-EE-CCCBTTCCEEEEEEEEECSSSCEE-EEEEEEE------EEECTTSCEEEEEEEEEEEEEECTTEEEEEEE
T ss_pred             ceEEEE-Ee-cCcccCCCEEEEEEEEECCCCCEE-EEEEEEE------EEEEeCCcCchheEEeeEEEEECCCCEEEEEE
Confidence            666676 34 447799999999999999888766 7777754      46778887666554      389999999999


Q ss_pred             EEEec
Q 013275          408 NLIAT  412 (446)
Q Consensus       408 ~l~pl  412 (446)
                      ++-+-
T Consensus        73 ~v~~~   77 (112)
T d1ex0a2          73 LIQAG   77 (112)
T ss_dssp             EECHH
T ss_pred             EEcHH
Confidence            87654

>d1vjja2 b.1.5.1 (A:479-593) Transglutaminase, two C-terminal domains {Human (Homo sapiens), TGase E3 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Transglutaminase, two C-terminal domains
family: Transglutaminase, two C-terminal domains
domain: Transglutaminase, two C-terminal domains
species: Human (Homo sapiens), TGase E3 [TaxId: 9606]

Probab=95.95  E-value=0.009  Score=48.33  Aligned_cols=72  Identities=13%  Similarity=0.189  Sum_probs=55.3

Q ss_pred             CCeEEEEEecCceEeeCCcEEEEEEEEeCCCCCcccEEEEEeeCCCCCcceEEEecccceeecc------cCCCCeeEEE
Q 013275          333 KEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAP------VEAFGSTDFH  406 (446)
Q Consensus       333 ~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~------L~P~~s~~~~  406 (446)
                      .|+.+.+ ++.+.+.+|++|.+.+.++|+|++... +.+.+.-      .++.|+|.....+.+      |.|+++..+.
T Consensus         2 ~~v~~~l-kl~~~~~iG~Df~v~l~~~N~s~~~~~-v~l~l~a------~av~YtG~~~~~~~~~~~~v~L~p~~~~~v~   73 (115)
T d1vjja2           2 PSIIGKL-KVAGMLAVGKEVNLVLLLKNLSRDTKT-VTVNMTA------WTIIYNGTLVHEVWKDSATMSLDPEEEAEHP   73 (115)
T ss_dssp             CSEEEEE-EECSCCBTTSCEEEEEEEEECSSSCEE-EEEEEEE------EEECTTCCEEEEEEEEEEEEEECTTCEEEEE
T ss_pred             CCeEEEE-EcCCCCCCCCCEEEEEEEEECCCCCEE-EEEEEEE------EEEEeCCcCchheEEeeEEEEECCCCeEEEE
Confidence            3555554 455788999999999999999988766 6666654      468888877666543      8999999999


Q ss_pred             EEEEec
Q 013275          407 LNLIAT  412 (446)
Q Consensus       407 L~l~pl  412 (446)
                      +.+-+-
T Consensus        74 ~~v~y~   79 (115)
T d1vjja2          74 IKISYA   79 (115)
T ss_dssp             EEECHH
T ss_pred             EEECHH
Confidence            987653

>d1g0da2 b.1.5.1 (A:472-583) Transglutaminase, two C-terminal domains {Red sea bream (Chrysophrys major) [TaxId: 143350]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Transglutaminase, two C-terminal domains
family: Transglutaminase, two C-terminal domains
domain: Transglutaminase, two C-terminal domains
species: Red sea bream (Chrysophrys major) [TaxId: 143350]

Probab=95.61  E-value=0.013  Score=47.22  Aligned_cols=69  Identities=14%  Similarity=0.153  Sum_probs=52.3

Q ss_pred             eEEEEEecCceEeeCCcEEEEEEEEeCCCCCcccEEEEEeeCCCCCcceEEEecccceeecc------cCCCCeeEEEEE
Q 013275          335 IELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAP------VEAFGSTDFHLN  408 (446)
Q Consensus       335 l~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~------L~P~~s~~~~L~  408 (446)
                      +++++..-|.  .+|+.|.+.+.++|+|++... +.+.+.-      .++.|+|.....+++      |.|+++..+.++
T Consensus         2 l~~~ik~~~~--~~G~Df~v~i~~~N~s~~~~~-v~l~l~a------~~v~YtG~~~~~~~~~~~~v~L~p~~~~~v~~~   72 (112)
T d1g0da2           2 LQLSIKHAQP--VFGTDFDVIVEVKNEGGRDAH-AQLTMLA------MAVTYNSLRRGECQRKTISVTVPAHKAHKEVMR   72 (112)
T ss_dssp             EEEEEEECCC--BTTCCEEEEEEEEECSSSCEE-EEEEEEE------EEECTTCBCCCCCCEEEEEEEECTTEEEEEEEE
T ss_pred             eEEEEeCCCC--ccCCCEEEEEEEEECCCCCEE-EEEEEEE------EEEEeCCcCccceeEeeEEEEECCCCeEEEEEE
Confidence            4556544443  379999999999999998876 7777754      478888887666544      899999999998


Q ss_pred             EEec
Q 013275          409 LIAT  412 (446)
Q Consensus       409 l~pl  412 (446)
                      +-+-
T Consensus        73 i~y~   76 (112)
T d1g0da2          73 LHYD   76 (112)
T ss_dssp             ECHH
T ss_pred             EcHH
Confidence            7653

>d2q3za2 b.1.5.1 (A:472-585) Transglutaminase, two C-terminal domains {Human (Homo sapiens), tissue isozyme [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Transglutaminase, two C-terminal domains
family: Transglutaminase, two C-terminal domains
domain: Transglutaminase, two C-terminal domains
species: Human (Homo sapiens), tissue isozyme [TaxId: 9606]

Probab=95.19  E-value=0.018  Score=46.41  Aligned_cols=65  Identities=20%  Similarity=0.254  Sum_probs=50.7

Q ss_pred             ecCceEeeCCcEEEEEEEEeCCCCCcccEEEEEeeCCCCCcceEEEecccceeec-------ccCCCCeeEEEEEEEec
Q 013275          341 EVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALA-------PVEAFGSTDFHLNLIAT  412 (446)
Q Consensus       341 ~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg-------~L~P~~s~~~~L~l~pl  412 (446)
                      .+.+.+.+|+.|.+.+.++|+|+.... +.+.+.-      .++.|+|.....++       .|.|+++..+.+.+-+-
T Consensus         7 k~~~~~~iG~Df~v~~~~~N~s~~~~~-v~l~l~a------~~v~YtG~~~~~~~~k~~~~v~L~p~~~~~v~~~v~y~   78 (114)
T d2q3za2           7 RVGQSMNMGSDFDVFAHITNNTAEEYV-CRLLLCA------RTVSYNGILGPECGTKYLLNLTLEPFSEKSVPLCILYE   78 (114)
T ss_dssp             ECCSCCBTTCCEEEEEEEEECSSSCEE-EEEEEEE------EEECTTCCEEEEEEEEEEEEEEECTTEEEEEEEEECHH
T ss_pred             EeCCCCcCCCCEEEEEEEEeCCCCCEE-EEEEEEE------EEEEeCCcCcceeEEecceEEEECCCCEEEEEEEEcHH
Confidence            457788999999999999999888765 6666654      46788877664442       48999999999987653

>d1vjja3 b.1.5.1 (A:594-692) Transglutaminase, two C-terminal domains {Human (Homo sapiens), TGase E3 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Transglutaminase, two C-terminal domains
family: Transglutaminase, two C-terminal domains
domain: Transglutaminase, two C-terminal domains
species: Human (Homo sapiens), TGase E3 [TaxId: 9606]

Probab=94.54  E-value=0.065  Score=41.93  Aligned_cols=71  Identities=14%  Similarity=0.124  Sum_probs=59.1

Q ss_pred             cceeecceEEEEEEEEcCCCcceEEEEEEEE---EeCCCceEeccCCCCCCccccCCCCeeeEEEEEEccccCceEEEEE
Q 013275           95 GAIYLGETFCSYISINNSSTLEVRDVVIKAE---IQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCT  171 (446)
Q Consensus        95 G~iylGEtFs~~i~v~N~s~~~v~~V~ikae---lqT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~~~lke~G~h~L~c~  171 (446)
                      |.+.+|+.+.+.+++.|--+.+++|+.+.+|   |.-+..++.+        +++.||+++...+.+-=+..|.+.|.+.
T Consensus         9 ~~~~v~~~~~v~vsf~NPL~~~L~~c~f~vEG~GL~~~~~~~~~--------~~v~p~~~~~~~~~~~P~~~G~~~l~a~   80 (99)
T d1vjja3           9 NEARVRKPVNVQMLFSNPLDEPVRDCVLMVEGSGLLLGNLKIDV--------PTLGPKERSRVRFDILPSRSGTKQLLAD   80 (99)
T ss_dssp             SCCBTTSCEEEEEEEECCSSSCBCSEEEEEECTTTSSSCEEEEE--------CCBCTTCEEEEEEEECCCSCEEEEEEEE
T ss_pred             CCcCcCCeEEEEEEEECCCCCchhCEEEEEEeCCCCCccEEEec--------CccCCCCEEEEEEEEEcCCcccEEEEEE
Confidence            6688999999999999999999999999998   3333333333        3589999999999999999999999887


Q ss_pred             EE
Q 013275          172 AL  173 (446)
Q Consensus       172 Vs  173 (446)
                      .+
T Consensus        81 f~   82 (99)
T d1vjja3          81 FS   82 (99)
T ss_dssp             EE
T ss_pred             EE
Confidence            53

>d2q3za3 b.1.5.1 (A:586-683) Transglutaminase, two C-terminal domains {Human (Homo sapiens), tissue isozyme [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Transglutaminase, two C-terminal domains
family: Transglutaminase, two C-terminal domains
domain: Transglutaminase, two C-terminal domains
species: Human (Homo sapiens), tissue isozyme [TaxId: 9606]

Probab=94.52  E-value=0.082  Score=41.27  Aligned_cols=73  Identities=14%  Similarity=0.259  Sum_probs=60.3

Q ss_pred             ccceeecceEEEEEEEEcCCCcceEEEEEEEE---EeCCCceEeccCCCCCCccccCCCCeeeEEEEEEccccCceEEEE
Q 013275           94 FGAIYLGETFCSYISINNSSTLEVRDVVIKAE---IQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVC  170 (446)
Q Consensus        94 fG~iylGEtFs~~i~v~N~s~~~v~~V~ikae---lqT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~~~lke~G~h~L~c  170 (446)
                      .|.+.+|+.+.+.+++.|--+.+++++.+.+|   |+-+..++.+.       ..+.||+++...+.+-=+..|.+.|.+
T Consensus         9 ~g~~~vg~~~~v~vsF~NPL~~~L~~c~~~vEG~GL~~~~~~~~~~-------~~v~pg~~~~~~~~~~P~~~G~~~L~a   81 (98)
T d2q3za3           9 LGEPKQKRKLVAEVSLQNPLPVALEGCTFTVEGAGLTEEQKTVEIP-------DPVEAGEEVKVRMDLVPLHMGLHKLVV   81 (98)
T ss_dssp             ESCCSSSSCEEEEEEEECCSSSCBCSEEEEEECTTTCSSCEEEEEC-------SCBCTTCEEEEEEEECCCSSSCEEEEE
T ss_pred             CCCcCcCCeEEEEEEEECCCCCchhCEEEEEEcCCcCcCcEEEeCC-------CccCCCCEEEEEEEEEcCCcccEEEEE
Confidence            46789999999999999999999999999998   44333344442       258999999999999999999999988


Q ss_pred             EEE
Q 013275          171 TAL  173 (446)
Q Consensus       171 ~Vs  173 (446)
                      ..+
T Consensus        82 ~f~   84 (98)
T d2q3za3          82 NFE   84 (98)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            753

>d1g0da3 b.1.5.1 (A:584-684) Transglutaminase, two C-terminal domains {Red sea bream (Chrysophrys major) [TaxId: 143350]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Transglutaminase, two C-terminal domains
family: Transglutaminase, two C-terminal domains
domain: Transglutaminase, two C-terminal domains
species: Red sea bream (Chrysophrys major) [TaxId: 143350]

Probab=92.93  E-value=0.12  Score=40.40  Aligned_cols=72  Identities=15%  Similarity=0.241  Sum_probs=59.0

Q ss_pred             ccceeecceEEEEEEEEcCCCcceEEEEEEEE---EeCCCceEeccCCCCCCccccCCCCeeeEEEEEEccccCceEEEE
Q 013275           94 FGAIYLGETFCSYISINNSSTLEVRDVVIKAE---IQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVC  170 (446)
Q Consensus        94 fG~iylGEtFs~~i~v~N~s~~~v~~V~ikae---lqT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~~~lke~G~h~L~c  170 (446)
                      -|.+.+|+.+.+.+++.|--+.+++|+.+.+|   |+- .+++..       ..++.||+++...+.+-=+..|.|.|.+
T Consensus         9 ~g~~~v~~~~~v~vsf~NPL~~~L~~c~~~vEG~GL~~-~~~~~~-------~~~v~p~~~~~~~~~~~P~~~G~~~L~a   80 (101)
T d1g0da3           9 PGKAVVWEPLTAYVSFTNPLPVPLKGGVFTLEGAGLLS-ATQIHV-------NGAVAPSGKVSVKLSFSPMRTGVRKLLV   80 (101)
T ss_dssp             CSCEETTCCEEEEEEEECCSSSCEESCEEEEEETTTEE-EEEEEC-------SSEECTTCEEEEEEEECCSSCEEEEEEE
T ss_pred             CCCcCcCCeEEEEEEEECCCCCeecCEEEEEEcCCCCc-ccEEEe-------cCCcCCCCEEEEEEEEEcCCcccEEEEE
Confidence            36789999999999999999999999999998   322 222222       2469999999999999999999999998


Q ss_pred             EEE
Q 013275          171 TAL  173 (446)
Q Consensus       171 ~Vs  173 (446)
                      ..+
T Consensus        81 ~f~   83 (101)
T d1g0da3          81 DFD   83 (101)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            753

>d3es6b1 b.1.18.23 (B:1-118) Prolactin-inducible protein, PIP {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: SVA-like
domain: Prolactin-inducible protein, PIP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.52  E-value=0.14  Score=41.01  Aligned_cols=73  Identities=11%  Similarity=0.018  Sum_probs=55.7

Q ss_pred             CCeEEEEEecCceEeeCCcEEEEEEEEeCCCCCcccEEEEEeeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEec
Q 013275          333 KEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIAT  412 (446)
Q Consensus       333 ~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl  412 (446)
                      +++-+. .++|-+++-++-|.++..|.|+.+..|. +.+.|..++     ++.......... -|.++++.+|.|.+.|+
T Consensus         6 k~~~~~-l~lP~sv~rge~~~i~~~V~Nyl~~~~~-v~v~L~~s~-----~~~~~~~~~~~~-cv~~~~~~t~~w~i~~~   77 (118)
T d3es6b1           6 KIIIKN-FDIPKSVRPNDEVTAVLAVQTELKECMV-VKTYLISSI-----PLQGAFNYKYTA-CLCDDNPKTFYWDFYTN   77 (118)
T ss_dssp             CCCEEC-CCCCSEECSSCCEEEEEEEEECCSSCEE-EEEEEEESS-----CCCSGGGCEEEE-EECSSSCEEEEEEECCS
T ss_pred             eeEEEE-cCCCceEecCCEEEEEEEEEECccceEE-EEEEEecCC-----CEEccCCCCcce-EECCCCceEEEEEEEec
Confidence            444333 5899999999999999999999999998 999998763     232223223333 67899999999999886


Q ss_pred             c
Q 013275          413 K  413 (446)
Q Consensus       413 ~  413 (446)
                      .
T Consensus        78 g   78 (118)
T d3es6b1          78 R   78 (118)
T ss_dssp             S
T ss_pred             C
Confidence            3

>d1ex0a3 b.1.5.1 (A:628-727) Transglutaminase, two C-terminal domains {Human (Homo sapiens), blood isozyme [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Transglutaminase, two C-terminal domains
family: Transglutaminase, two C-terminal domains
domain: Transglutaminase, two C-terminal domains
species: Human (Homo sapiens), blood isozyme [TaxId: 9606]

Probab=91.01  E-value=0.45  Score=36.96  Aligned_cols=71  Identities=13%  Similarity=0.164  Sum_probs=58.7

Q ss_pred             cceeecceEEEEEEEEcCCCcceEEEEEEEEEeC--CCceEeccCCCCCCccccCCCCeeeEEEEEEccccCceEEEEEE
Q 013275           95 GAIYLGETFCSYISINNSSTLEVRDVVIKAEIQT--DKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTA  172 (446)
Q Consensus        95 G~iylGEtFs~~i~v~N~s~~~v~~V~ikaelqT--~s~r~~L~~~~~~~~~~L~pg~~ld~iv~~~lke~G~h~L~c~V  172 (446)
                      |.+.+|+.+.+.+++.|--+.+++|+.+.+|=--  ..+++.        .+++.||+++...+.+-=+..|.|.|.+..
T Consensus        11 g~~~v~~~~~v~v~F~NPL~~~L~nc~~~vEG~GL~~~~~~~--------~~~v~p~~~~~~~~~~~P~~~G~~~l~a~f   82 (100)
T d1ex0a3          11 GTQVVGSDMTVTVQFTNPLKETLRNVWVHLDGPGVTRPMKKM--------FREIRPNSTVQWEEVCRPWVSGHRKLIASM   82 (100)
T ss_dssp             ECCBTTSCEEEEEEEECCSSSCEEEEEEEEEETTTEEEEEEE--------EEEECTTCEEEEEEEECCSSCEEEEEEEEE
T ss_pred             CCcccCCeEEEEEEEECCCCCchhCEEEEEEcCCCceeeEEe--------cCccCCCCEEEEEEEEecCCcccEEEEEEE
Confidence            7789999999999999999999999999997411  112222        357999999999999999999999998875


Q ss_pred             E
Q 013275          173 L  173 (446)
Q Consensus       173 s  173 (446)
                      +
T Consensus        83 ~   83 (100)
T d1ex0a3          83 S   83 (100)
T ss_dssp             E
T ss_pred             E
Confidence            3