Citrus Sinensis ID: 013297

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440------
Protein Sequence
MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEVILHFLQMCFVRYYVFFYIILTRLSGISHCIQSAYTDSCLEHFLLLVFF
Secondary Structure (PSIPRED)
cccccEEEEEEEEcccccccHHHHHHHHccccccHHccccccEEEcccccccHHHHHHHHHHHHHHHcccccccccEEEEEccccccccccHHHHHHHHHcccccccEEEEcHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEcccccccccccccccccccEEEEccccccEEEEEccEEEEccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEcccccHHHHHHHHHHHHHHHHHHcccccHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHcccccccccEEEEEEcccccccEEEEEEEEcccccccHHHHHHHccHHHHHcccccccHHHHHHHHHHHHHHccccccccccccccccccHHHccccEEEEEEcc
Secondary Structure Prediction (SSPRO)
ccccccEEEEEEEcccccccHHHHHHHcccccccEEEEcccccccccccHHHHHHHHHHHHHHHHHHccccHHHccEEEEccHHHEcccHHHHHHHHHHHcccccccEcEEccccccHcHHHHHHHHHHHHccccccccEEEEEEccEEEEccccccccccHHHHHHHEcccccEEEccccccccHHccHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccHHcccEEEEEcccHHHHHHHHHHHHHHHHHHccccccHHHcccHHHHHccccHcccccHHHHHHHHHHHHHHHHHHcccccEcccccccccHHHHHHHHHHHHHcccHHHcccEEEEEEcccHHHHHEEEEEEEcccccccHHHHHHHccHHHHHHHcccccHHHHHHHHHHHHHHccEEEcccccccccccccccccHHHHHEHHHEc
Coil and Loop (DISEMBL)
maknvgilamdiyfpptcvQQEAleahdgaskgkytIGLGQECMAFCSEVEDVISMSLTAVTNLLEkykidpkqigrlevgsetvidKSKSIKTFLMQIFEKFgntdiegvdstnacyggtAALFNCVNwvessswdgryglvvctdsavyaegparptgGAAAVVMLVgpdapvafesklrgshmshaydfykpnlaseypvvdgklsqTCYLMALDTCYKCLCSKYeklegkqfslsnadyfvfhspynKLVQKSFARLLFNDFMRNassvdeaakeklgpfstlsgdesyqsrDLEKVSQQLAkplydakvqpstlipkqvgnMYTASLYAALASLIHNkhseldgkRVVLFSYGSGLTATMFSLKlseghhpfslSNILSVMNVAGKLKSRHEVILHFLQMCFVRYYVFFYIILTRLSGISHCIQSAYTDSCLEHFLLLVFF
Flexible Loop (DISEMBL)
MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEkykidpkqigrlevgsetvidksKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEVILHFLQMCFVRYYVFFYIILTRLSGISHCIQSAYTDSCLEHFLLLVFF
Low Complexity Region (SEG)
MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTaslyaalaslIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEVILHFLQMCFVRYYVFFYIILTRLSGISHCIQSAYTDSCLEHFLLLVFF
Disordered region (IsUnstruct)
****VGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGP******************YDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMR*****************************************YDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEVILHFLQMCFVRYYVFFYIILTRLSGISHCIQSAYTDSCLEHFLLLVF*
Disordered Region (DISOPRED)
**KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEVILHFLQMCFVRYYVFFYIILTRLSGISHCIQSAYTDSCLEHFLLLVFF
Disordered Region (DISEMBL)
MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEVILHFLQMCFVRYYVFFYIILTRLSGISHCIQSAYTDSCLEHFLLLVFF
Disordered Region (DISPRO)
**KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEVILHFLQMCFVRYYVFFYIILTRLSGISHCIQSAYTDSCLEHFLLLVFF
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEVILHFLQMCFVRYYVFFYIILTRLSGISHCIQSAYTDSCLEHFLLLVFF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	446	2.2.26 [Sep-21-2011]
P54873	461	Hydroxymethylglutaryl-CoA	yes	no	0.890	0.861	0.838	0.0
P54872	482	Hydroxymethylglutaryl-CoA	yes	no	0.869	0.804	0.525	1e-121
Q5R7Z9	520	Hydroxymethylglutaryl-CoA	yes	no	0.887	0.761	0.527	1e-119
Q01581	520	Hydroxymethylglutaryl-CoA	yes	no	0.887	0.761	0.527	1e-119
P54961	453	Hydroxymethylglutaryl-CoA	N/A	no	0.874	0.860	0.536	1e-118
Q8JZK9	520	Hydroxymethylglutaryl-CoA	yes	no	0.878	0.753	0.524	1e-117
P17425	520	Hydroxymethylglutaryl-CoA	yes	no	0.878	0.753	0.522	1e-116
P23228	522	Hydroxymethylglutaryl-CoA	no	no	0.869	0.743	0.530	1e-116
P13704	520	Hydroxymethylglutaryl-CoA	yes	no	0.878	0.753	0.514	1e-115
P54868	508	Hydroxymethylglutaryl-CoA	no	no	0.881	0.773	0.513	1e-115

>sp|P54873|HMCS_ARATH Hydroxymethylglutaryl-CoA synthase OS=Arabidopsis thaliana GN=HMGS PE=1 SV=2

 Score =  719 bits (1857), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/397 (83%), Positives = 372/397 (93%)

Query: 1   MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTA 60
           MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQ+C+AFC+E+EDVISMS  A
Sbjct: 1   MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQDCLAFCTELEDVISMSFNA 60

Query: 61  VTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGG 120
           VT+L EKYKIDP QIGRLEVGSETVIDKSKSIKTFLMQ+FEK GNTD+EGVDSTNACYGG
Sbjct: 61  VTSLFEKYKIDPNQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEGVDSTNACYGG 120

Query: 121 TAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESK 180
           TAAL NCVNWVES+SWDGRYGLV+CTDSAVYAEGPARPTGGAAA+ ML+GPDAP+ FESK
Sbjct: 121 TAALLNCVNWVESNSWDGRYGLVICTDSAVYAEGPARPTGGAAAIAMLIGPDAPIVFESK 180

Query: 181 LRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSN 240
           LR SHM+H YDFYKPNLASEYPVVDGKLSQTCYLMALD+CYK LC+K+EK+EGK+FS+++
Sbjct: 181 LRASHMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKIEGKEFSIND 240

Query: 241 ADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEK 300
           ADY VFHSPYNKLVQKSFARLL+NDF+RNASS+DEAAKEK  P+S+L+ DESYQSRDLEK
Sbjct: 241 ADYIVFHSPYNKLVQKSFARLLYNDFLRNASSIDEAAKEKFTPYSSLTLDESYQSRDLEK 300

Query: 301 VSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSG 360
           VSQQ+AKP YDAKVQP+TLIPK+VGNMYTASLYAA ASLIH KH++L GKRVV+FSYGSG
Sbjct: 301 VSQQIAKPFYDAKVQPTTLIPKEVGNMYTASLYAAFASLIHKKHNDLAGKRVVMFSYGSG 360

Query: 361 LTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHE 397
            TATMFSL+L++   PFS+SNI SVM+V GKLK+RHE
Sbjct: 361 STATMFSLRLNDNKPPFSISNIASVMDVGGKLKARHE 397

This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. Devoided of acetoacetyl-CoA thiolase (AACT) activity. Required for the development of both tapetosomes and elaioplasts in tapetal cells and for pollen viability during pollen tube elongation.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 3EC: .EC: 3EC: .EC: 1EC: 0

>sp|P54872|HMCSA_DICDI Hydroxymethylglutaryl-CoA synthase A OS=Dictyostelium discoideum GN=hgsA PE=1 SV=2

 Score =  435 bits (1118), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 208/396 (52%), Positives = 274/396 (69%), Gaps = 8/396 (2%)

Query: 3   KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
           +N+GI  +++YFP T V QE LE  DG S+GKYT+GLGQ  MAFC + ED+ S+SL AV 
Sbjct: 5   ENIGIHGIEVYFPSTYVAQEDLEKFDGVSQGKYTLGLGQTNMAFCGDREDIYSLSLNAVN 64

Query: 63  NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTA 122
           NL++K+ +DP  IGRLEVG+ETVIDKSKS+KT LM +F K GNT I+G+D+ NACYGGT+
Sbjct: 65  NLMDKFNVDPNSIGRLEVGTETVIDKSKSVKTVLMDLFAKHGNTSIDGIDTINACYGGTS 124

Query: 123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLR 182
           AL N + W+ESS WDGR  +VV  D AVY +GPARPTGGA  V ML+GP+AP+ FES LR
Sbjct: 125 ALHNALQWMESSYWDGRNAIVVAGDIAVYEKGPARPTGGAGVVAMLIGPNAPITFESGLR 184

Query: 183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNAD 242
           G HM + YDFYKP++ SEYP VDGKLS +CY  A+D CY      +EK  GK FSL   D
Sbjct: 185 GVHMENVYDFYKPDMDSEYPRVDGKLSISCYFRAIDNCYNRYAKAFEKKYGKSFSLDQVD 244

Query: 243 YFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVS 302
           + +FHSPYNKLVQKSF R+L+NDF+ N +    A+ E    +  +  +++Y    LEK  
Sbjct: 245 FALFHSPYNKLVQKSFGRMLYNDFLNNPNDSRYASLE---AYKNVKPEDTYFDSVLEKAL 301

Query: 303 QQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLT 362
             + K  Y  KV P+TL+ KQ+GN Y  S Y+ L SL+  K ++L GKRV+ FSYGSGL 
Sbjct: 302 SAITKNDYATKVAPTTLLAKQLGNTYCGSTYSGLLSLLDEKSNDLVGKRVLTFSYGSGLA 361

Query: 363 ATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEV 398
           A+ FS K+ +      +++I+  +++  +L  R  V
Sbjct: 362 ASAFSFKVEK-----PINHIVEKVDLKNRLAKRVRV 392

Condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: 1

EC: 0

>sp|Q5R7Z9|HMCS1_PONAB Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Pongo abelii GN=HMGCS1 PE=2 SV=1

 Score =  429 bits (1102), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 213/404 (52%), Positives = 284/404 (70%), Gaps = 8/404 (1%)

Query: 3   KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
           K+VGI+A++IYFP   V Q  LE +DG + GKYTIGLGQ  M FC++ ED+ S+ +T V 
Sbjct: 15  KDVGIVALEIYFPSQYVDQAELEKYDGVAAGKYTIGLGQAKMGFCTDREDINSLCMTVVQ 74

Query: 63  NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTA 122
           NL+E+  +    IGRLEVG+ET+IDKSKS+KT LMQ+FE+ GNTDIEG+D+TNACYGGTA
Sbjct: 75  NLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGIDTTNACYGGTA 134

Query: 123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLR 182
           A+FN VNW+ESSSWDGRY LVV  D AVYA G ARPTGG  AV +L+GP+AP+ FE  LR
Sbjct: 135 AVFNAVNWIESSSWDGRYALVVAGDIAVYATGNARPTGGVGAVALLIGPNAPLIFERGLR 194

Query: 183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYE---KLEG--KQFS 237
           G+HM HAYDFYKP++ SEYP+VDGKLS  CYL ALD CY   C K     + EG  K F+
Sbjct: 195 GTHMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYCKKIRAQWQKEGNDKDFT 254

Query: 238 LSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRD 297
           L++  + +FHSPY KLVQKS AR+L NDF+ + +    +    L  F  +  +++Y  RD
Sbjct: 255 LNDFGFMIFHSPYCKLVQKSLARMLLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDRD 314

Query: 298 LEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHN-KHSELDGKRVVLFS 356
           +EK   + +  L+  K + S L+  Q GNMYT+S+Y +LAS++      +L GKR+ +FS
Sbjct: 315 VEKAFMKASSELFSQKTKASLLVSNQNGNMYTSSVYGSLASVLAQYSPQQLAGKRIGVFS 374

Query: 357 YGSGLTATMFSLKLSEGHHPFSLSNIL--SVMNVAGKLKSRHEV 398
           YGSGL AT++SLK+++   P S  + +  S+ ++  +L SR  V
Sbjct: 375 YGSGLAATLYSLKVTQDATPGSALDKITASLCDLKSRLDSRTGV 418

This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.

Pongo abelii (taxid: 9601)

EC: 2

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: 1

EC: 0

>sp|Q01581|HMCS1_HUMAN Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Homo sapiens GN=HMGCS1 PE=1 SV=2

 Score =  427 bits (1099), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 213/404 (52%), Positives = 283/404 (70%), Gaps = 8/404 (1%)

Query: 3   KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
           K+VGI+A++IYFP   V Q  LE +DG   GKYTIGLGQ  M FC++ ED+ S+ +T V 
Sbjct: 15  KDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQAKMGFCTDREDINSLCMTVVQ 74

Query: 63  NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTA 122
           NL+E+  +    IGRLEVG+ET+IDKSKS+KT LMQ+FE+ GNTDIEG+D+TNACYGGTA
Sbjct: 75  NLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGIDTTNACYGGTA 134

Query: 123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLR 182
           A+FN VNW+ESSSWDGRY LVV  D AVYA G ARPTGG  AV +L+GP+AP+ FE  LR
Sbjct: 135 AVFNAVNWIESSSWDGRYALVVAGDIAVYATGNARPTGGVGAVALLIGPNAPLIFERGLR 194

Query: 183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYE---KLEG--KQFS 237
           G+HM HAYDFYKP++ SEYP+VDGKLS  CYL ALD CY   C K     + EG  K F+
Sbjct: 195 GTHMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYCKKIHAQWQKEGNDKDFT 254

Query: 238 LSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRD 297
           L++  + +FHSPY KLVQKS AR+L NDF+ + +    +    L  F  +  +++Y  RD
Sbjct: 255 LNDFGFMIFHSPYCKLVQKSLARMLLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDRD 314

Query: 298 LEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHN-KHSELDGKRVVLFS 356
           +EK   + +  L+  K + S L+  Q GNMYT+S+Y +LAS++      +L GKR+ +FS
Sbjct: 315 VEKAFMKASSELFSQKTKASLLVSNQNGNMYTSSVYGSLASVLAQYSPQQLAGKRIGVFS 374

Query: 357 YGSGLTATMFSLKLSEGHHPFSLSNIL--SVMNVAGKLKSRHEV 398
           YGSGL AT++SLK+++   P S  + +  S+ ++  +L SR  V
Sbjct: 375 YGSGLAATLYSLKVTQDATPGSALDKITASLCDLKSRLDSRTGV 418

This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: 1

EC: 0

>sp|P54961|HMCS1_BLAGE Hydroxymethylglutaryl-CoA synthase 1 OS=Blattella germanica GN=HMGCS-1 PE=2 SV=1

 Score =  424 bits (1091), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 215/401 (53%), Positives = 284/401 (70%), Gaps = 11/401 (2%)

Query: 4   NVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTN 63
           +VGI+A+++ FP   V Q  LE +D  S GKYT+GLGQ  M FC++ ED+ S+ LT V+ 
Sbjct: 5   DVGIVALELIFPSQYVDQVDLEVYDNVSAGKYTVGLGQARMGFCTDREDINSLCLTVVSR 64

Query: 64  LLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAA 123
           L+E++ I   QIGRLEVG+ET++DKSKS+KT LMQ+F+   NTDIEGVD+ NACYGGT+A
Sbjct: 65  LMERWSIPYSQIGRLEVGTETLLDKSKSVKTVLMQLFKD--NTDIEGVDTVNACYGGTSA 122

Query: 124 LFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRG 183
           LFN ++WVESSSWDGRY LVV  D AVYA+G ARPTGGA AV MLVG +AP+ F+  +R 
Sbjct: 123 LFNAISWVESSSWDGRYALVVAGDIAVYAKGSARPTGGAGAVAMLVGANAPLVFDRGVRS 182

Query: 184 SHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADY 243
           SHM HAYDFYKP+L+S YP VDGKLS  CYL ALD CY+  CSK +K  G++F +   D 
Sbjct: 183 SHMQHAYDFYKPDLSSLYPTVDGKLSIQCYLSALDHCYQLYCSKIQKQLGEKFDIERLDA 242

Query: 244 FVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSG---DESYQSRDLEK 300
            +FH+PY KLVQKS ARL+ NDF+R +   +E    K      L G   +++Y  R++EK
Sbjct: 243 VLFHAPYCKLVQKSLARLVLNDFVRAS---EEERTTKYSSLEALKGVKLEDTYFDREVEK 299

Query: 301 VSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHS-ELDGKRVVLFSYGS 359
                +K +++ K +PS L+  QVGNMYT SLY  L SL+ +K + EL GKRV LFSYGS
Sbjct: 300 AVMTYSKNMFEEKTKPSLLLANQVGNMYTPSLYGGLVSLLVSKSAQELAGKRVALFSYGS 359

Query: 360 GLTATMFSLKL-SEGHHPFSLSNILSVM-NVAGKLKSRHEV 398
           GL ++MFSL++ S+     SL  ++S + ++  +L  RH+V
Sbjct: 360 GLASSMFSLRISSDASAKSSLQRLVSNLSHIKPQLDLRHKV 400

This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.

Blattella germanica (taxid: 6973)

EC: 2

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: 1

EC: 0

>sp|Q8JZK9|HMCS1_MOUSE Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Mus musculus GN=Hmgcs1 PE=1 SV=1

 Score =  421 bits (1083), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 211/402 (52%), Positives = 286/402 (71%), Gaps = 10/402 (2%)

Query: 3   KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
           K+VGI+A++IYFP   V Q  LE +DG   GKYTIGLGQ  M FC++ ED+ S+ LT V 
Sbjct: 15  KDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQARMGFCTDREDINSLCLTVVQ 74

Query: 63  NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTA 122
            L+E++ +    IGRLEVG+ET+IDKSKS+K+ LMQ+FE+ GNTDIEG+D+TNACYGGTA
Sbjct: 75  KLMERHSLSYDCIGRLEVGTETIIDKSKSVKSNLMQLFEESGNTDIEGIDTTNACYGGTA 134

Query: 123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLR 182
           A+FN VNWVESSSWDGRY LVV  D A+YA G ARPTGG  AV +L+GP+AP+ F+  LR
Sbjct: 135 AVFNAVNWVESSSWDGRYALVVAGDIAIYATGNARPTGGVGAVALLIGPNAPLIFDRGLR 194

Query: 183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCY----KCLCSKYEKLEG--KQF 236
           G+HM HAYDFYKP++ SEYPVVDGKLS  CYL ALD CY    K + ++++K EG  K F
Sbjct: 195 GTHMQHAYDFYKPDMLSEYPVVDGKLSIQCYLSALDRCYSVYRKKIRAQWQK-EGKDKDF 253

Query: 237 SLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSR 296
           +L++  + +FHSPY KLVQKS AR+  NDF+ + +    +    L  F  +  +++Y  R
Sbjct: 254 TLNDFGFMIFHSPYCKLVQKSLARMFLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDR 313

Query: 297 DLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHN-KHSELDGKRVVLF 355
           D+EK   + +  L++ K + S L+  Q GNMYT+S+Y +LAS++      +L GKRV +F
Sbjct: 314 DVEKAFMKASSELFNQKTKASLLVSNQNGNMYTSSVYGSLASVLAQYSPQQLAGKRVGVF 373

Query: 356 SYGSGLTATMFSLKLSEGHHPFSLSNIL--SVMNVAGKLKSR 395
           SYGSGL AT++SLK+++   P S  + +  S+ ++  +L SR
Sbjct: 374 SYGSGLAATLYSLKVTQDATPGSALDKITASLCDLKSRLDSR 415

This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: 1

EC: 0

>sp|P17425|HMCS1_RAT Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Rattus norvegicus GN=Hmgcs1 PE=1 SV=1

 Score =  420 bits (1080), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 210/402 (52%), Positives = 285/402 (70%), Gaps = 10/402 (2%)

Query: 3   KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
           K+VGI+A++IYFP   V Q  LE +DG   GKYTIGLGQ  M FC++ ED+ S+ LT V 
Sbjct: 15  KDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQARMGFCTDREDINSLCLTVVQ 74

Query: 63  NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTA 122
            L+E+  +    IGRLEVG+ET+IDKSKS+K+ LMQ+FE+ GNTDIEG+D+TNACYGGTA
Sbjct: 75  KLMERNSLSYDCIGRLEVGTETIIDKSKSVKSNLMQLFEESGNTDIEGIDTTNACYGGTA 134

Query: 123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLR 182
           A+FN VNW+ESSSWDGRY LVV  D A+YA G ARPTGG  AV +L+GP+APV F+  LR
Sbjct: 135 AVFNAVNWIESSSWDGRYALVVAGDIAIYASGNARPTGGVGAVALLIGPNAPVIFDRGLR 194

Query: 183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCY----KCLCSKYEKLEG--KQF 236
           G+HM HAYDFYKP++ SEYPVVDGKLS  CYL ALD CY    K + ++++K EG  K F
Sbjct: 195 GTHMQHAYDFYKPDMLSEYPVVDGKLSIQCYLSALDRCYSVYRKKIRAQWQK-EGKDKDF 253

Query: 237 SLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSR 296
           +L++  + +FHSPY KLVQKS AR+  NDF+ + +    +    L  F  +  +++Y  R
Sbjct: 254 TLNDFGFMIFHSPYCKLVQKSLARMFLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDR 313

Query: 297 DLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHN-KHSELDGKRVVLF 355
           D+EK   + +  L++ K + S L+  Q GNMYT+S+Y +LAS++      +L GKR+ +F
Sbjct: 314 DVEKAFMKASAELFNQKTKASLLVSNQNGNMYTSSVYGSLASVLAQYSPQQLAGKRIGVF 373

Query: 356 SYGSGLTATMFSLKLSEGHHPFSLSNIL--SVMNVAGKLKSR 395
           SYGSGL AT++SLK+++   P S  + +  S+ ++  +L SR
Sbjct: 374 SYGSGLAATLYSLKVTQDATPGSALDKITASLCDLKSRLDSR 415

This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: 1

EC: 0

>sp|P23228|HMCS1_CHICK Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Gallus gallus GN=HMGCS1 PE=1 SV=1

 Score =  417 bits (1072), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 216/407 (53%), Positives = 280/407 (68%), Gaps = 19/407 (4%)

Query: 3   KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
           K+VGI+A++IYFP   V Q  LE +DG   GKYTIGLGQ  M FCS+ ED+ S+ LT V 
Sbjct: 15  KDVGIVALEIYFPSQYVDQTELEKYDGVDAGKYTIGLGQSKMGFCSDREDINSLCLTVVQ 74

Query: 63  NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTA 122
            L+E+  +    IGRLEVG+ET+IDKSKS+KT LMQ+FE+ GNTD+EG+D+TNACYGGTA
Sbjct: 75  KLMERNSLSYDCIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDVEGIDTTNACYGGTA 134

Query: 123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLR 182
           ALFN +NW+ESSSWDGRY LVV  D AVYA G ARPTGGA AV MLVG +AP+ FE  LR
Sbjct: 135 ALFNAINWIESSSWDGRYALVVAGDIAVYATGNARPTGGAGAVAMLVGSNAPLIFERGLR 194

Query: 183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYE---KLEG--KQFS 237
           G+HM HAYDFYKP++ SEYPVVDGKLS  CYL ALD CY    +K     + EG  + F+
Sbjct: 195 GTHMQHAYDFYKPDMVSEYPVVDGKLSIQCYLSALDRCYSVYRNKIHAQWQKEGTDRGFT 254

Query: 238 LSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSG------DE 291
           L++  + +FHSPY KLVQKS ARLL NDF+      D+ A+   G FS L        ++
Sbjct: 255 LNDFGFMIFHSPYCKLVQKSVARLLLNDFLS-----DQNAETANGVFSGLEAFRDVKLED 309

Query: 292 SYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSE-LDGK 350
           +Y  RD+EK   + +  L++ K + S L+  Q GNMYT S+Y  LASL+     E L G+
Sbjct: 310 TYFDRDVEKAFMKASAELFNQKTKASLLVSNQNGNMYTPSVYGCLASLLAQYSPEHLAGQ 369

Query: 351 RVVLFSYGSGLTATMFSLKLSEGHHPFSLSNIL--SVMNVAGKLKSR 395
           R+  FSYGSG  AT++S+++++   P S  + +  S+ ++  +L SR
Sbjct: 370 RISEFSYGSGFAATLYSIRVTQDATPGSALDKITASLSDLKARLDSR 416

This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.

Gallus gallus (taxid: 9031)

EC: 2

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: 1

EC: 0

>sp|P13704|HMCS1_CRIGR Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Cricetulus griseus GN=HMGCS1 PE=3 SV=1

 Score =  416 bits (1070), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 207/402 (51%), Positives = 284/402 (70%), Gaps = 10/402 (2%)

Query: 3   KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
           K+VGI+A++IYFP   V Q  LE +DG   GKYTIGLGQ  M FC++ ED+ S+ LT V 
Sbjct: 15  KDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQARMGFCTDREDINSLCLTVVQ 74

Query: 63  NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTA 122
           NL+E+  +    IGRLEVG+ET+IDKSKS+K+ LMQ+FE+ GNTDIEG+D+TNACYGGTA
Sbjct: 75  NLMERNSLSYDCIGRLEVGTETIIDKSKSVKSNLMQLFEESGNTDIEGIDTTNACYGGTA 134

Query: 123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLR 182
           A+FN VNW+ESSSWDGRY LVV  D A+YA G ARPTGG  AV +L+GP+AP+ F+  LR
Sbjct: 135 AVFNAVNWIESSSWDGRYALVVAGDIAIYATGNARPTGGVGAVALLIGPNAPLIFDRGLR 194

Query: 183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCY----KCLCSKYEKLEG--KQF 236
           G+HM HAYDFYKP++ SEYP+VDGKLS  CYL ALD CY    K + ++++K EG    F
Sbjct: 195 GTHMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYRKKIRAQWQK-EGNDNDF 253

Query: 237 SLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSR 296
           +L++  + + HSPY KLVQKS AR+  NDF+ + +    +    L  F  +  +++Y  R
Sbjct: 254 TLNDFGFMISHSPYCKLVQKSLARMFLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDR 313

Query: 297 DLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHN-KHSELDGKRVVLF 355
           D+EK   + +  L++ K + S L+  Q GNMYT+S+Y +LAS++      +L GKR+ +F
Sbjct: 314 DVEKAFMKASSELFNQKTKASLLVSNQNGNMYTSSVYGSLASVLAQYSPQQLAGKRIGVF 373

Query: 356 SYGSGLTATMFSLKLSEGHHPFSLSNIL--SVMNVAGKLKSR 395
           SYGSGL AT++SLK+++   P S  + +  S+ ++  +L SR
Sbjct: 374 SYGSGLAATLYSLKVTQDATPGSALDKVTASLCDLKSRLDSR 415

This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.

Cricetulus griseus (taxid: 10029)

EC: 2

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: 1

EC: 0

>sp|P54868|HMCS2_HUMAN Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Homo sapiens GN=HMGCS2 PE=1 SV=1

 Score =  416 bits (1069), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 206/401 (51%), Positives = 275/401 (68%), Gaps = 8/401 (1%)

Query: 3   KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
           K+VGILA+++YFP   V Q  LE ++    GKYT+GLGQ  M FCS  ED+ S+ LT V 
Sbjct: 52  KDVGILALEVYFPAQYVDQTDLEKYNNVEAGKYTVGLGQTRMGFCSVQEDINSLCLTVVQ 111

Query: 63  NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTA 122
            L+E+ ++    +GRLEVG+ET+IDKSK++KT LM++F+  GNTDIEG+D+TNACYGGTA
Sbjct: 112 RLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTA 171

Query: 123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLR 182
           +LFN  NW+ESSSWDGRY +VVC D AVY  G ARPTGGA AV ML+GP AP+A E  LR
Sbjct: 172 SLFNAANWMESSSWDGRYAMVVCGDIAVYPSGNARPTGGAGAVAMLIGPKAPLALERGLR 231

Query: 183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYE---KLEG--KQFS 237
           G+HM + YDFYKPNLASEYP+VDGKLS  CYL ALD CY     K +   K  G  + F+
Sbjct: 232 GTHMENVYDFYKPNLASEYPIVDGKLSIQCYLRALDRCYTSYRKKIQNQWKQAGSDRPFT 291

Query: 238 LSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRD 297
           L +  Y +FH+P+ K+VQKS ARL+FNDF+  +S    +  + L  F  L  +++Y ++D
Sbjct: 292 LDDLQYMIFHTPFCKMVQKSLARLMFNDFLSASSDTQTSLYKGLEAFGGLKLEDTYTNKD 351

Query: 298 LEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLI-HNKHSELDGKRVVLFS 356
           L+K   + ++ ++D K + S  +    GNMYT+SLY  LASL+ H+   EL G R+  FS
Sbjct: 352 LDKALLKASQDMFDKKTKASLYLSTHNGNMYTSSLYGCLASLLSHHSAQELAGSRIGAFS 411

Query: 357 YGSGLTATMFSLKLSEGHHPFSLSNIL--SVMNVAGKLKSR 395
           YGSGL A+ FS ++S+   P S  + L  S  ++  +L SR
Sbjct: 412 YGSGLAASFFSFRVSQDAAPGSPLDKLVSSTSDLPKRLASR 452

This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: 1

EC: 0

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	446
164604966	464	hydroxymethylglutaryl-CoA synthase [Heve	0.890	0.855	0.901	0.0
42795470	464	HMG-CoA synthase 2 [Hevea brasiliensis]	0.890	0.855	0.899	0.0
16417956	464	hydroxymethylglutaryl coenzyme A synthas	0.892	0.857	0.894	0.0
14916100	464	hydroxymethylglutaryl coenzyme A synthas	0.892	0.857	0.891	0.0
255537251	464	hydroxymethylglutaryl-CoA synthase, puta	0.890	0.855	0.889	0.0
164604964	465	hydroxymethylglutaryl-CoA synthase [Heve	0.892	0.855	0.891	0.0
343466153	465	hydroxymethylglutaryl-CoA synthase [Sira	0.894	0.858	0.887	0.0
225426749	464	PREDICTED: hydroxymethylglutaryl-CoA syn	0.890	0.855	0.889	0.0
449460467	466	PREDICTED: hydroxymethylglutaryl-CoA syn	0.919	0.879	0.862	0.0
356563228	460	PREDICTED: hydroxymethylglutaryl-CoA syn	0.890	0.863	0.881	0.0

>gi|164604966|dbj|BAF98279.1| hydroxymethylglutaryl-CoA synthase [Hevea brasiliensis]

 Score =  764 bits (1972), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/397 (90%), Positives = 384/397 (96%)

Query: 1   MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTA 60
           MAKNVGILAMDIYFPPT VQQEALEAHDGASKGKYTIGLGQ+CM FC+EVEDVISMSLTA
Sbjct: 1   MAKNVGILAMDIYFPPTYVQQEALEAHDGASKGKYTIGLGQDCMPFCTEVEDVISMSLTA 60

Query: 61  VTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGG 120
           VT+LL+KY IDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGG
Sbjct: 61  VTSLLDKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGG 120

Query: 121 TAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESK 180
           TAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAA+ ML+GP+AP+AFESK
Sbjct: 121 TAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPEAPIAFESK 180

Query: 181 LRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSN 240
            RGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALD+CYK  C+KYEKLEGKQFS+S+
Sbjct: 181 FRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHFCAKYEKLEGKQFSISD 240

Query: 241 ADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEK 300
           A+YFVFHSPYNKLVQKSFARL+FNDF+RNASS+D+AAKEKL PFSTLSGDESYQ+RDLEK
Sbjct: 241 AEYFVFHSPYNKLVQKSFARLVFNDFVRNASSIDDAAKEKLAPFSTLSGDESYQNRDLEK 300

Query: 301 VSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSG 360
           VSQQ+AKPLYDAKVQP+TLIPKQVGNMYTASLYAA ASL+HNKH+EL GKRV+LFSYGSG
Sbjct: 301 VSQQVAKPLYDAKVQPTTLIPKQVGNMYTASLYAAFASLLHNKHTELAGKRVILFSYGSG 360

Query: 361 LTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHE 397
           LTATMFSL+L EG HPFSLSNI +VMNVAGKLK+RHE
Sbjct: 361 LTATMFSLRLHEGQHPFSLSNIATVMNVAGKLKTRHE 397

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42795470|gb|AAS46245.1| HMG-CoA synthase 2 [Hevea brasiliensis]

 Score =  763 bits (1969), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/397 (89%), Positives = 383/397 (96%)

Query: 1   MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTA 60
           MAKNVGILAMDIYFPPT VQQEALEAHDGASKGKYTIGLGQ+CMAFC+EVEDVISMSLTA
Sbjct: 1   MAKNVGILAMDIYFPPTYVQQEALEAHDGASKGKYTIGLGQDCMAFCTEVEDVISMSLTA 60

Query: 61  VTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGG 120
           VT+LLEKY IDP QIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDS NACYGG
Sbjct: 61  VTSLLEKYNIDPNQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSANACYGG 120

Query: 121 TAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESK 180
           TAALFNCVNWVES+SWDGRYGLVVCTDSAVYAEGPARPTGGAAA+ ML+GP+AP+AFESK
Sbjct: 121 TAALFNCVNWVESNSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPEAPIAFESK 180

Query: 181 LRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSN 240
            RGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALD+CYK  C+KYEKLEGKQFS+S+
Sbjct: 181 FRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHFCAKYEKLEGKQFSISD 240

Query: 241 ADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEK 300
           A+YFVFHSPYNKLVQKSFARL+FNDF+RNASS+D+AAKEKL PFSTLSGDESYQ+RDLEK
Sbjct: 241 AEYFVFHSPYNKLVQKSFARLVFNDFVRNASSIDDAAKEKLAPFSTLSGDESYQNRDLEK 300

Query: 301 VSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSG 360
           VSQQ+AKPLYDAKVQP+TLIPKQVGNMYTASLYAA ASL+HNKH+EL GKRV+LFSYGSG
Sbjct: 301 VSQQVAKPLYDAKVQPTTLIPKQVGNMYTASLYAAFASLLHNKHTELAGKRVILFSYGSG 360

Query: 361 LTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHE 397
           LTATMFSL+L EG HPFSLSNI +VMNVAGKLK+RHE
Sbjct: 361 LTATMFSLRLHEGQHPFSLSNIATVMNVAGKLKTRHE 397

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|16417956|gb|AAL18930.1|AF429389_1 hydroxymethylglutaryl coenzyme A synthase [Hevea brasiliensis]

 Score =  757 bits (1955), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/398 (89%), Positives = 382/398 (95%)

Query: 1   MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTA 60
           MAKNVGILA+DIYFPPT VQQEALEAHDGASKGKYTIGLGQ+CMAFC+EVEDVISMSLTA
Sbjct: 1   MAKNVGILAVDIYFPPTFVQQEALEAHDGASKGKYTIGLGQDCMAFCTEVEDVISMSLTA 60

Query: 61  VTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGG 120
           VT+LL+KY IDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGG
Sbjct: 61  VTSLLDKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGG 120

Query: 121 TAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESK 180
           TAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAA+ +LVGPDAP+AFESK
Sbjct: 121 TAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAILVGPDAPIAFESK 180

Query: 181 LRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSN 240
            RGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALD+CYK  C+KYEK EGKQFS+S+
Sbjct: 181 FRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHFCAKYEKFEGKQFSISD 240

Query: 241 ADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEK 300
           A+YFVFHSPYNKLVQKSFARL+FNDF+RNASS+DE AKEKL PFS LSGDESYQ+RDLEK
Sbjct: 241 AEYFVFHSPYNKLVQKSFARLVFNDFVRNASSIDETAKEKLAPFSNLSGDESYQNRDLEK 300

Query: 301 VSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSG 360
           VSQQ+AKPLYDAKV+P+TLIPKQVGNMYTASLYAA ASL+H+KH+EL GKRV LFSYGSG
Sbjct: 301 VSQQVAKPLYDAKVKPTTLIPKQVGNMYTASLYAAFASLLHSKHTELAGKRVTLFSYGSG 360

Query: 361 LTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEV 398
           LTATMFSL+L EG HPFSLSNI SVMNVAGKLK+RHE+
Sbjct: 361 LTATMFSLRLHEGQHPFSLSNIASVMNVAGKLKARHEL 398

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|14916100|gb|AAK73854.1| hydroxymethylglutaryl coenzyme A synthase [Hevea brasiliensis]

 Score =  754 bits (1948), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/398 (89%), Positives = 381/398 (95%)

Query: 1   MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTA 60
           MAKNVGILA+DIYFPPT VQQEALEAHDGASKGKYTIGLGQ+CMAFC+EVEDVISMSLTA
Sbjct: 1   MAKNVGILAVDIYFPPTFVQQEALEAHDGASKGKYTIGLGQDCMAFCTEVEDVISMSLTA 60

Query: 61  VTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGG 120
           VT+LL+KY IDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGG
Sbjct: 61  VTSLLDKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGG 120

Query: 121 TAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESK 180
           TAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAA+ +LVGPDAP+AFESK
Sbjct: 121 TAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAILVGPDAPIAFESK 180

Query: 181 LRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSN 240
            RGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALD+CYK  C+KYEK EGKQFS+S+
Sbjct: 181 FRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHFCAKYEKFEGKQFSISD 240

Query: 241 ADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEK 300
           A+YFVFHSPYNKLVQKSFARL+FNDF+RNA S+DE AKEKL PFS LSGDESYQ+RDLEK
Sbjct: 241 AEYFVFHSPYNKLVQKSFARLVFNDFVRNARSIDETAKEKLAPFSNLSGDESYQNRDLEK 300

Query: 301 VSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSG 360
           VSQQ+AKPLYDAKV+P+TLIPKQVGNMYTASLYAA ASL+H+KH+EL GKRV LFSYGSG
Sbjct: 301 VSQQVAKPLYDAKVKPTTLIPKQVGNMYTASLYAAFASLLHSKHTELAGKRVTLFSYGSG 360

Query: 361 LTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEV 398
           LTATMFSL+L EG HPFSLSNI SVMNVAGKLK+RHE+
Sbjct: 361 LTATMFSLRLHEGQHPFSLSNIASVMNVAGKLKARHEL 398

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255537251|ref|XP_002509692.1| hydroxymethylglutaryl-CoA synthase, putative [Ricinus communis] gi|223549591|gb|EEF51079.1| hydroxymethylglutaryl-CoA synthase, putative [Ricinus communis]

 Score =  753 bits (1944), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/397 (88%), Positives = 380/397 (95%)

Query: 1   MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTA 60
           MAKNVGILA+DIYFPPTCVQQEALEAHDGASKGKYTIGLGQ+CM FC+EVEDVISMSLTA
Sbjct: 1   MAKNVGILALDIYFPPTCVQQEALEAHDGASKGKYTIGLGQDCMGFCTEVEDVISMSLTA 60

Query: 61  VTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGG 120
           VT+LL+ Y IDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK GNTDIEGVDS+NACYGG
Sbjct: 61  VTSLLDNYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKHGNTDIEGVDSSNACYGG 120

Query: 121 TAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESK 180
           TAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAA+ ML+GPDAP+AFESK
Sbjct: 121 TAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPDAPIAFESK 180

Query: 181 LRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSN 240
            RGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALD+CYK  C+KYEK EGKQFS+S+
Sbjct: 181 YRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHFCAKYEKFEGKQFSISD 240

Query: 241 ADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEK 300
           A+YFVFHSPYNKLVQKSFARL+FNDF+RNASS+DEAAKEKL PFSTL+GDESYQ+RDLEK
Sbjct: 241 AEYFVFHSPYNKLVQKSFARLVFNDFVRNASSIDEAAKEKLAPFSTLTGDESYQNRDLEK 300

Query: 301 VSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSG 360
           VSQQ+AKPLYDAKVQP+TLIPKQVGNMYTASLYAA ASL+HNK+S+L GKRV+LFSYGSG
Sbjct: 301 VSQQVAKPLYDAKVQPTTLIPKQVGNMYTASLYAAFASLLHNKNSKLAGKRVILFSYGSG 360

Query: 361 LTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHE 397
           LTATMFSL+L EG HPFSLSNI +VMNV  KLKSRHE
Sbjct: 361 LTATMFSLRLHEGQHPFSLSNIATVMNVTDKLKSRHE 397

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|164604964|dbj|BAF98278.1| hydroxymethylglutaryl-CoA synthase [Hevea brasiliensis]

 Score =  752 bits (1942), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/398 (89%), Positives = 381/398 (95%)

Query: 1   MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTA 60
           MAKNVGILA+DIYFPPT VQQEALEAHDGASKGKYTIGLGQ+CMAFC+EVEDVISMSLTA
Sbjct: 1   MAKNVGILAVDIYFPPTFVQQEALEAHDGASKGKYTIGLGQDCMAFCTEVEDVISMSLTA 60

Query: 61  VTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGG 120
           VT+LL+KY IDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGG
Sbjct: 61  VTSLLDKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGG 120

Query: 121 TAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESK 180
           TAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAA+ +LVGPDAP+AFESK
Sbjct: 121 TAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAILVGPDAPIAFESK 180

Query: 181 LRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSN 240
            RGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALD+CYK  C+KYEK EGKQFS+S+
Sbjct: 181 FRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHFCAKYEKFEGKQFSISD 240

Query: 241 ADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEK 300
           A+YFVFHSPYNKLVQKSFA L+FNDF+RNASS+DE AKEKL PFS LSGDESYQ+RDLEK
Sbjct: 241 AEYFVFHSPYNKLVQKSFACLVFNDFVRNASSIDETAKEKLAPFSNLSGDESYQNRDLEK 300

Query: 301 VSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSG 360
           VSQQ+AKPLYDAKV+P+TLIPKQVGNMYTASLYAA ASL+H+KH+EL GKRV LFSYGSG
Sbjct: 301 VSQQVAKPLYDAKVKPTTLIPKQVGNMYTASLYAAFASLLHSKHTELAGKRVTLFSYGSG 360

Query: 361 LTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEV 398
           LTATMFSL+L EG HPFSLSNI SVMNVAGKLK+RHE+
Sbjct: 361 LTATMFSLRLHEGQHPFSLSNIASVMNVAGKLKARHEL 398

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|343466153|gb|AEM42970.1| hydroxymethylglutaryl-CoA synthase [Siraitia grosvenorii]

 Score =  751 bits (1939), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/399 (88%), Positives = 377/399 (94%)

Query: 1   MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTA 60
           MAKNVGILA+DIYFPPT VQQEALEAHDGASKGKYTIGLGQ+CMAFC+EVEDVISMSLT 
Sbjct: 1   MAKNVGILAVDIYFPPTYVQQEALEAHDGASKGKYTIGLGQDCMAFCTEVEDVISMSLTV 60

Query: 61  VTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGG 120
           VT+LLEKY IDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK GNTDIEGVDSTNACYGG
Sbjct: 61  VTSLLEKYGIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKHGNTDIEGVDSTNACYGG 120

Query: 121 TAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESK 180
           TAAL NCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAA+ ML+GPDAP+AFES+
Sbjct: 121 TAALLNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPDAPIAFESR 180

Query: 181 LRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSN 240
           +RGSHMSH YDFYKPNLASEYPVVDGKLSQTCYLMALD+CYK LC KYEKLEGKQFS+S+
Sbjct: 181 VRGSHMSHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKQLCHKYEKLEGKQFSISD 240

Query: 241 ADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEK 300
           ADYFVFHSPYNKLVQKSFARLLFNDF RNASS+DE AKEKL PFSTLSGDESYQSRDLEK
Sbjct: 241 ADYFVFHSPYNKLVQKSFARLLFNDFKRNASSIDEVAKEKLAPFSTLSGDESYQSRDLEK 300

Query: 301 VSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSG 360
           +SQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAA  SL+HNKH+ L G RV+LFSYGSG
Sbjct: 301 ISQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAAFISLLHNKHNTLSGNRVILFSYGSG 360

Query: 361 LTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEVI 399
            TATMFSLKL+EG HPFSLSNI +++NV  KLKSRHE++
Sbjct: 361 STATMFSLKLNEGQHPFSLSNIAAILNVDKKLKSRHELV 399

Source: Siraitia grosvenorii

Species: Siraitia grosvenorii

Genus: Siraitia

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225426749|ref|XP_002282434.1| PREDICTED: hydroxymethylglutaryl-CoA synthase [Vitis vinifera] gi|297742614|emb|CBI34763.3| unnamed protein product [Vitis vinifera]

 Score =  748 bits (1932), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/397 (88%), Positives = 378/397 (95%)

Query: 1   MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTA 60
           M KNVGILAMDIYFPPTCVQQEALE HDGASKGKYTIGLGQ+CMAFCSEVEDVISMSLT 
Sbjct: 1   MTKNVGILAMDIYFPPTCVQQEALEVHDGASKGKYTIGLGQDCMAFCSEVEDVISMSLTV 60

Query: 61  VTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGG 120
           VT+LLEKY IDPKQIGRLEVGSETVIDKSKSIKTFLMQIFE+ GN DIEGVDS+NACYGG
Sbjct: 61  VTSLLEKYGIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEECGNNDIEGVDSSNACYGG 120

Query: 121 TAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESK 180
           TAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAA+ MLVGPDAP+AFESK
Sbjct: 121 TAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLVGPDAPIAFESK 180

Query: 181 LRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSN 240
           LRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALD+CYK LCSKYEKLEGKQFS+++
Sbjct: 181 LRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKLLCSKYEKLEGKQFSIAD 240

Query: 241 ADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEK 300
           ADYFVFHSPYNKLVQKSFARL+FND +RNASSVDEA K+KL PFS+LSGDESYQ+RDLEK
Sbjct: 241 ADYFVFHSPYNKLVQKSFARLVFNDVVRNASSVDEAGKQKLEPFSSLSGDESYQNRDLEK 300

Query: 301 VSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSG 360
            SQQ+AKPLYDAKVQPSTL+PKQVGNMYTASLYAA  S++HNKHSEL GKRVV+FSYGSG
Sbjct: 301 ASQQVAKPLYDAKVQPSTLLPKQVGNMYTASLYAAFVSVLHNKHSELSGKRVVMFSYGSG 360

Query: 361 LTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHE 397
           LTATMFS +L +G HPFSLSNI +VM+VAGKLK+RHE
Sbjct: 361 LTATMFSFQLRDGQHPFSLSNIATVMDVAGKLKARHE 397

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449460467|ref|XP_004147967.1| PREDICTED: hydroxymethylglutaryl-CoA synthase-like [Cucumis sativus] gi|449494252|ref|XP_004159493.1| PREDICTED: hydroxymethylglutaryl-CoA synthase-like [Cucumis sativus]

 Score =  743 bits (1918), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/415 (86%), Positives = 381/415 (91%), Gaps = 5/415 (1%)

Query: 1   MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTA 60
           MA NVGILA+DIYFPPT VQQEALEAHDGASKGKYTIGLGQ+CMAFC+EVEDVISMSLT 
Sbjct: 1   MANNVGILAIDIYFPPTYVQQEALEAHDGASKGKYTIGLGQDCMAFCTEVEDVISMSLTV 60

Query: 61  VTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGG 120
           V +LLEKY IDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK GNTDIEGVDSTNACYGG
Sbjct: 61  VNSLLEKYGIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKHGNTDIEGVDSTNACYGG 120

Query: 121 TAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESK 180
           TAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAA+ ML+GPDAP+AFESK
Sbjct: 121 TAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPDAPIAFESK 180

Query: 181 LRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLE-GKQFSLS 239
           LRGSHMSH YDFYKPNLASEYPVVDGKLSQTCYLMALD+CYK LC KYEKLE GKQFSLS
Sbjct: 181 LRGSHMSHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKQLCHKYEKLEGGKQFSLS 240

Query: 240 NADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLE 299
           NADYFVFHSPYNKLVQKSFARLLFNDF RNASS+DEAAKEKL PFSTLS DESYQSRDLE
Sbjct: 241 NADYFVFHSPYNKLVQKSFARLLFNDFKRNASSIDEAAKEKLAPFSTLSNDESYQSRDLE 300

Query: 300 KVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGS 359
           K++QQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAA  SL+HNK+  L G RVVLFSYGS
Sbjct: 301 KITQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAAFISLLHNKNKSLVGNRVVLFSYGS 360

Query: 360 GLTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEVI----LHFLQMCFVRY 410
           G TATMFSLKL+EG +PFSLSNI +++NV  KLKSRHE++    +  +Q+   RY
Sbjct: 361 GSTATMFSLKLNEGQNPFSLSNISAILNVDKKLKSRHELVPEKFVEIMQLMEHRY 415

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356563228|ref|XP_003549866.1| PREDICTED: hydroxymethylglutaryl-CoA synthase-like [Glycine max]

 Score =  743 bits (1917), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/397 (88%), Positives = 376/397 (94%)

Query: 1   MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTA 60
           MAKNVGILA+DIYFPPTC+QQE LEAHDGASKGKYTIGLGQ+CMAFC+EVEDVISMSLT 
Sbjct: 1   MAKNVGILAIDIYFPPTCIQQELLEAHDGASKGKYTIGLGQDCMAFCTEVEDVISMSLTV 60

Query: 61  VTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGG 120
           V++LLEKY IDPKQIGRLEVGSETVIDKSKSIKTF+MQIFEK+GNTDIEGVDSTNACYGG
Sbjct: 61  VSSLLEKYAIDPKQIGRLEVGSETVIDKSKSIKTFIMQIFEKYGNTDIEGVDSTNACYGG 120

Query: 121 TAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESK 180
           TAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAV ML+GPDAP++FESK
Sbjct: 121 TAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGPDAPISFESK 180

Query: 181 LRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSN 240
           LRGSHM+HAYDFYKPNLASEYPVVDGKLSQTCYLMALD+CY  L  KYEK EGKQFS+S+
Sbjct: 181 LRGSHMAHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYNHLSHKYEKQEGKQFSISD 240

Query: 241 ADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEK 300
           A+YFVFHSPYNKLVQKSFARL+FNDF++NAS VDEAAKEKL PF+TLSGDESYQSRDLEK
Sbjct: 241 AEYFVFHSPYNKLVQKSFARLVFNDFLKNASFVDEAAKEKLEPFATLSGDESYQSRDLEK 300

Query: 301 VSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSG 360
            SQQ+AKP YDAKVQP+TLIPKQVGNMYTASLYAA  SLIHNKHS LDGKRV+LFSYGSG
Sbjct: 301 ASQQVAKPQYDAKVQPTTLIPKQVGNMYTASLYAAFISLIHNKHSTLDGKRVILFSYGSG 360

Query: 361 LTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHE 397
           LT+TMFSL L EG HPFSLSNI  +M+VAGKLKSRHE
Sbjct: 361 LTSTMFSLLLREGQHPFSLSNIDKMMDVAGKLKSRHE 397

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	446
TAIR|locus:2137015	461	HMGS "HYDROXYMETHYLGLUTARYL-CO	0.890	0.861	0.816	1e-180
DICTYBASE|DDB_G0288461	482	hgsA "hydroxymethylglutaryl-Co	0.869	0.804	0.515	3.5e-107
UNIPROTKB|Q01581	520	HMGCS1 "Hydroxymethylglutaryl-	0.881	0.755	0.521	3.1e-106
UNIPROTKB|F6RJG0	565	HMGCS1 "Uncharacterized protei	0.878	0.693	0.519	6.5e-106
UNIPROTKB|E2QX73	520	HMGCS1 "Uncharacterized protei	0.878	0.753	0.517	2.8e-105
UNIPROTKB|F1SMG8	548	HMGCS1 "Uncharacterized protei	0.878	0.715	0.517	3.6e-105
ZFIN|ZDB-GENE-040426-1042	519	hmgcs1 "3-hydroxy-3-methylglut	0.887	0.763	0.525	3.6e-105
MGI|MGI:107592	520	Hmgcs1 "3-hydroxy-3-methylglut	0.878	0.753	0.517	2e-104
UNIPROTKB|F1N9T0	522	HMGCS1 "Hydroxymethylglutaryl-	0.878	0.750	0.523	3.2e-104
UNIPROTKB|F1NTT0	525	HMGCS1 "Hydroxymethylglutaryl-	0.878	0.746	0.523	3.2e-104

TAIR|locus:2137015 HMGS "HYDROXYMETHYLGLUTARYL-COA SYNTHASE" [Arabidopsis thaliana (taxid:3702)]

 Score = 1754 (622.5 bits), Expect = 1.0e-180, P = 1.0e-180
 Identities = 324/397 (81%), Positives = 363/397 (91%)

Query:     1 MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTA 60
             MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQ+C+AFC+E+EDVISMS  A
Sbjct:     1 MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQDCLAFCTELEDVISMSFNA 60

Query:    61 VTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGG 120
             VT+L EKYKIDP QIGRLEVGSETVIDKSKSIKTFLMQ+FEK GNTD+EGVDSTNACYGG
Sbjct:    61 VTSLFEKYKIDPNQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEGVDSTNACYGG 120

Query:   121 TAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESK 180
             TAAL NCVNWVES+SWDGRYGLV+CTDSAVYAEGPARPTGGAAA+ ML+GPDAP+ FESK
Sbjct:   121 TAALLNCVNWVESNSWDGRYGLVICTDSAVYAEGPARPTGGAAAIAMLIGPDAPIVFESK 180

Query:   181 LRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSN 240
             LR SHM+H YDFYKPNLASEYPVVDGKLSQTCYLMALD+CYK LC+K+EK+EGK+FS+++
Sbjct:   181 LRASHMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKIEGKEFSIND 240

Query:   241 ADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEK 300
             ADY VFHSPYNKLVQKSFARLL+NDF+RNASS+DEAAKEK  P+S+L+ DESYQSRDLEK
Sbjct:   241 ADYIVFHSPYNKLVQKSFARLLYNDFLRNASSIDEAAKEKFTPYSSLTLDESYQSRDLEK 300

Query:   301 VSQQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXXIHNKHSELDGKRVVLFSYGSG 360
             VSQQ+AKP YDAKVQP+TLIPK+VGNMYT          IH KH++L GKRVV+FSYGSG
Sbjct:   301 VSQQIAKPFYDAKVQPTTLIPKEVGNMYTASLYAAFASLIHKKHNDLAGKRVVMFSYGSG 360

Query:   361 LTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHE 397
              TATMFSL+L++   PFS+SNI SVM+V GKLK+RHE
Sbjct:   361 STATMFSLRLNDNKPPFSISNIASVMDVGGKLKARHE 397

GO:0003824 "catalytic activity" evidence=IEA

GO:0004421 "hydroxymethylglutaryl-CoA synthase activity" evidence=IEA;IGI;ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0008299 "isoprenoid biosynthetic process" evidence=IEA

GO:0019287 "isopentenyl diphosphate biosynthetic process, mevalonate pathway" evidence=TAS

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006084 "acetyl-CoA metabolic process" evidence=RCA

GO:0003985 "acetyl-CoA C-acetyltransferase activity" evidence=IGI

DICTYBASE|DDB_G0288461 hgsA "hydroxymethylglutaryl-CoA synthase" [Dictyostelium discoideum (taxid:44689)]

 Score = 1060 (378.2 bits), Expect = 3.5e-107, P = 3.5e-107
 Identities = 204/396 (51%), Positives = 269/396 (67%)

Query:     3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
             +N+GI  +++YFP T V QE LE  DG S+GKYT+GLGQ  MAFC + ED+ S+SL AV 
Sbjct:     5 ENIGIHGIEVYFPSTYVAQEDLEKFDGVSQGKYTLGLGQTNMAFCGDREDIYSLSLNAVN 64

Query:    63 NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTA 122
             NL++K+ +DP  IGRLEVG+ETVIDKSKS+KT LM +F K GNT I+G+D+ NACYGGT+
Sbjct:    65 NLMDKFNVDPNSIGRLEVGTETVIDKSKSVKTVLMDLFAKHGNTSIDGIDTINACYGGTS 124

Query:   123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLR 182
             AL N + W+ESS WDGR  +VV  D AVY +GPARPTGGA  V ML+GP+AP+ FES LR
Sbjct:   125 ALHNALQWMESSYWDGRNAIVVAGDIAVYEKGPARPTGGAGVVAMLIGPNAPITFESGLR 184

Query:   183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNAD 242
             G HM + YDFYKP++ SEYP VDGKLS +CY  A+D CY      +EK  GK FSL   D
Sbjct:   185 GVHMENVYDFYKPDMDSEYPRVDGKLSISCYFRAIDNCYNRYAKAFEKKYGKSFSLDQVD 244

Query:   243 YFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVS 302
             + +FHSPYNKLVQKSF R+L+NDF+ N +    A+ E    +  +  +++Y    LEK  
Sbjct:   245 FALFHSPYNKLVQKSFGRMLYNDFLNNPNDSRYASLEA---YKNVKPEDTYFDSVLEKAL 301

Query:   303 QQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXXIHNKHSELDGKRVVLFSYGSGLT 362
               + K  Y  KV P+TL+ KQ+GN Y           +  K ++L GKRV+ FSYGSGL 
Sbjct:   302 SAITKNDYATKVAPTTLLAKQLGNTYCGSTYSGLLSLLDEKSNDLVGKRVLTFSYGSGLA 361

Query:   363 ATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEV 398
             A+ FS K+ +   P  +++I+  +++  +L  R  V
Sbjct:   362 ASAFSFKVEK---P--INHIVEKVDLKNRLAKRVRV 392

GO:0008299 "isoprenoid biosynthetic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0004421 "hydroxymethylglutaryl-CoA synthase activity" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016126 "sterol biosynthetic process" evidence=IEA

GO:0008202 "steroid metabolic process" evidence=IEA

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

UNIPROTKB|Q01581 HMGCS1 "Hydroxymethylglutaryl-CoA synthase, cytoplasmic" [Homo sapiens (taxid:9606)]

 Score = 1051 (375.0 bits), Expect = 3.1e-106, P = 3.1e-106
 Identities = 209/401 (52%), Positives = 273/401 (68%)

Query:     3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
             K+VGI+A++IYFP   V Q  LE +DG   GKYTIGLGQ  M FC++ ED+ S+ +T V 
Sbjct:    15 KDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQAKMGFCTDREDINSLCMTVVQ 74

Query:    63 NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTA 122
             NL+E+  +    IGRLEVG+ET+IDKSKS+KT LMQ+FE+ GNTDIEG+D+TNACYGGTA
Sbjct:    75 NLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGIDTTNACYGGTA 134

Query:   123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLR 182
             A+FN VNW+ESSSWDGRY LVV  D AVYA G ARPTGG  AV +L+GP+AP+ FE  LR
Sbjct:   135 AVFNAVNWIESSSWDGRYALVVAGDIAVYATGNARPTGGVGAVALLIGPNAPLIFERGLR 194

Query:   183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYE---KLEG--KQFS 237
             G+HM HAYDFYKP++ SEYP+VDGKLS  CYL ALD CY   C K     + EG  K F+
Sbjct:   195 GTHMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYCKKIHAQWQKEGNDKDFT 254

Query:   238 LSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRD 297
             L++  + +FHSPY KLVQKS AR+L NDF+ + +    +    L  F  +  +++Y  RD
Sbjct:   255 LNDFGFMIFHSPYCKLVQKSLARMLLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDRD 314

Query:   298 LEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXXIHN-KHSELDGKRVVLFS 356
             +EK   + +  L+  K + S L+  Q GNMYT          +      +L GKR+ +FS
Sbjct:   315 VEKAFMKASSELFSQKTKASLLVSNQNGNMYTSSVYGSLASVLAQYSPQQLAGKRIGVFS 374

Query:   357 YGSGLTATMFSLKLSEGHHPFS-LSNIL-SVMNVAGKLKSR 395
             YGSGL AT++SLK+++   P S L  I  S+ ++  +L SR
Sbjct:   375 YGSGLAATLYSLKVTQDATPGSALDKITASLCDLKSRLDSR 415

GO:0008299 "isoprenoid biosynthetic process" evidence=IEA

GO:0004421 "hydroxymethylglutaryl-CoA synthase activity" evidence=IEA

GO:0016853 "isomerase activity" evidence=IEA

GO:0033197 "response to vitamin E" evidence=IEA

GO:0042493 "response to drug" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0043177 "organic acid binding" evidence=IEA

GO:0046690 "response to tellurium ion" evidence=IEA

GO:0055094 "response to lipoprotein particle stimulus" evidence=IEA

GO:0071372 "cellular response to follicle-stimulating hormone stimulus" evidence=IEA

GO:0071397 "cellular response to cholesterol" evidence=IEA

GO:0001101 "response to acid" evidence=IEA

GO:0001889 "liver development" evidence=IEA

GO:0007420 "brain development" evidence=IEA

GO:0008144 "drug binding" evidence=IEA

GO:0008584 "male gonad development" evidence=IEA

GO:0009645 "response to low light intensity stimulus" evidence=IEA

GO:0014074 "response to purine-containing compound" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=NAS

GO:0005829 "cytosol" evidence=TAS

GO:0006695 "cholesterol biosynthetic process" evidence=TAS

GO:0044255 "cellular lipid metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

UNIPROTKB|F6RJG0 HMGCS1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 1048 (374.0 bits), Expect = 6.5e-106, P = 6.5e-106
 Identities = 209/402 (51%), Positives = 279/402 (69%)

Query:     3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
             K+VGI+A++IYFP   V Q  LE +DG   GKYTIGLGQ  M FC++ ED+ S+ +T V 
Sbjct:    60 KDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQAKMGFCTDREDINSLCMTVVQ 119

Query:    63 NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTA 122
             NL+E+  +    IGRLEVG+ET+IDKSKS+KT LMQ+FE+ GNTDIEG+D+TNACYGGTA
Sbjct:   120 NLMERNSLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGIDTTNACYGGTA 179

Query:   123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLR 182
             A+FN VNW+ESSSWDGRY LVV  D AVYA G ARPTGG  AV ML+GP+AP+ FE  LR
Sbjct:   180 AVFNAVNWIESSSWDGRYALVVAGDIAVYATGNARPTGGVGAVAMLIGPNAPLIFERGLR 239

Query:   183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCY----KCLCSKYEKLEG--KQF 236
             G+HM HAYDFYKP++ SEYP+VDGKLS  CYL ALD CY    K + ++++K EG  + F
Sbjct:   240 GTHMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYRKKIRARWQK-EGNDRDF 298

Query:   237 SLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSR 296
             +L++  + +FHSPY KLVQKS AR+L NDF+ + +    +    L  F  +  +++Y  R
Sbjct:   299 TLNDFGFMIFHSPYCKLVQKSLARMLLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDR 358

Query:   297 DLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXXIHN-KHSELDGKRVVLF 355
             D+EK   + +  L++ K + S L+  Q GNMYT          +      +L GKR+ +F
Sbjct:   359 DVEKAFMKASSELFNQKTKASLLVSNQNGNMYTSSVYGSLASVLAQYSPQQLAGKRIGVF 418

Query:   356 SYGSGLTATMFSLKLSEGHHPFS-LSNIL-SVMNVAGKLKSR 395
             SYGSGL AT++SLK+++   P S L  I+ S+ ++  +L SR
Sbjct:   419 SYGSGLAATLYSLKVTQDATPGSALDKIVASICDLKSRLDSR 460

GO:0005886 "plasma membrane" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0008299 "isoprenoid biosynthetic process" evidence=IEA

GO:0004421 "hydroxymethylglutaryl-CoA synthase activity" evidence=IEA

UNIPROTKB|E2QX73 HMGCS1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 1042 (371.9 bits), Expect = 2.8e-105, P = 2.8e-105
 Identities = 208/402 (51%), Positives = 279/402 (69%)

Query:     3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
             K+VGI+A++IYFP   V Q  LE +DG   GKYTIGLGQ  M FC++ ED+ S+ LT V 
Sbjct:    15 KDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQAKMGFCTDREDINSLCLTVVQ 74

Query:    63 NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTA 122
             NL+E++ +    IGRLEVG+ET+IDKSKS+KT LMQ+FE+ GNTDIEG+D+TNACYGGTA
Sbjct:    75 NLMERHSLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGIDTTNACYGGTA 134

Query:   123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLR 182
             A+FN VNW+ESSSWDGRY LVV  D AVYA G ARPTGG  AV +L+GP+AP+ F+  LR
Sbjct:   135 AVFNAVNWIESSSWDGRYALVVAGDIAVYATGNARPTGGVGAVALLIGPNAPLIFDRGLR 194

Query:   183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCY----KCLCSKYEKLEG--KQF 236
             G+HM HAYDFYKP++ SEYP+VDGKLS  CYL ALD CY    K + ++++K EG  K F
Sbjct:   195 GTHMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYRKKIRAQWQK-EGNDKDF 253

Query:   237 SLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSR 296
             +L++  + +FHSPY KLVQKS AR+L NDF+ + +    +    L  F  +  +++Y  R
Sbjct:   254 TLNDFGFMIFHSPYCKLVQKSLARMLLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDR 313

Query:   297 DLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXXIHN-KHSELDGKRVVLF 355
             D+EK   + +  L++ K + S L+  Q GNMYT          +      +L GKR+ +F
Sbjct:   314 DVEKAFMKASAELFNQKTKASLLVSNQNGNMYTSSVYGSLASVLAQYSPQQLAGKRIGVF 373

Query:   356 SYGSGLTATMFSLKLSEGHHPFS-LSNIL-SVMNVAGKLKSR 395
             SYGSGL AT++SL++++   P S L  I  S+ ++  +L SR
Sbjct:   374 SYGSGLAATLYSLRVTQDATPGSALDKITASLCDLKSRLDSR 415

GO:0008299 "isoprenoid biosynthetic process" evidence=IEA

GO:0004421 "hydroxymethylglutaryl-CoA synthase activity" evidence=IEA

UNIPROTKB|F1SMG8 HMGCS1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 1041 (371.5 bits), Expect = 3.6e-105, P = 3.6e-105
 Identities = 208/402 (51%), Positives = 279/402 (69%)

Query:     3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
             K+VGI+A++IYFP   V Q  LE +DG + G+YTIGLGQ  M FC++ ED+ S+ +T V 
Sbjct:    43 KDVGIVALEIYFPSQYVDQAELEKYDGVAAGRYTIGLGQAKMGFCTDREDINSLCMTVVQ 102

Query:    63 NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTA 122
             NL+E+  +    IGRLEVG+ET+IDKSKS+KT LMQ+FE+ GNTDIEG+D+ NACYGGTA
Sbjct:   103 NLMERNSLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGIDTINACYGGTA 162

Query:   123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLR 182
             A+FN VNW+ESSSWDGRY LVV  D AVYA G ARPTGG  A+ +L+GP+AP+ FE  LR
Sbjct:   163 AVFNAVNWIESSSWDGRYALVVAGDIAVYAAGNARPTGGVGAIALLIGPNAPLIFERGLR 222

Query:   183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCY----KCLCSKYEKLEG--KQF 236
             G+HM HAYDFYKP++ SEYP+VDGKLS  CYL ALD CY    K + ++++K EG  K F
Sbjct:   223 GTHMQHAYDFYKPDMLSEYPIVDGKLSIECYLSALDRCYSVYRKKIHARWQK-EGNDKDF 281

Query:   237 SLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSR 296
             +L++  + VFHSPY KLVQKS AR+L NDF+ + +    +    L  F  +  +++Y  R
Sbjct:   282 TLNDFGFMVFHSPYCKLVQKSLARMLLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDR 341

Query:   297 DLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXXIHN-KHSELDGKRVVLF 355
             D+EK   + +  L++ K + S L+  Q GNMYT          +      EL GKR+ +F
Sbjct:   342 DVEKAFMKASSELFNQKTKASLLVSNQNGNMYTSSLYGCLASVLAQYSPQELAGKRIGMF 401

Query:   356 SYGSGLTATMFSLKLSEGHHPFS-LSNIL-SVMNVAGKLKSR 395
             SYGSGL AT++SLK+++   P S L  I+ S+ ++  +L SR
Sbjct:   402 SYGSGLAATLYSLKVTQDATPGSALDKIIASLCDLKSRLDSR 443

GO:0005886 "plasma membrane" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0008299 "isoprenoid biosynthetic process" evidence=IEA

GO:0004421 "hydroxymethylglutaryl-CoA synthase activity" evidence=IEA

ZFIN|ZDB-GENE-040426-1042 hmgcs1 "3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 (soluble)" [Danio rerio (taxid:7955)]

 Score = 1041 (371.5 bits), Expect = 3.6e-105, P = 3.6e-105
 Identities = 213/405 (52%), Positives = 277/405 (68%)

Query:     3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
             K+VGI+AM++Y P   V Q  LE +DG   GKYT+GLGQ  M FCS+ ED+ S+ LT V 
Sbjct:    15 KDVGIIAMEVYVPSQYVDQAELEEYDGVGAGKYTVGLGQARMGFCSDREDINSLCLTVVQ 74

Query:    63 NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTA 122
              L+E+  +  + +GRLEVG+ET+IDKSKS KT LMQ+FE+ GNTD+EGVD+TNACYGGTA
Sbjct:    75 RLMERNGLSYESVGRLEVGTETIIDKSKSTKTVLMQLFEESGNTDVEGVDTTNACYGGTA 134

Query:   123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLR 182
             ALFN VNWVESSSWDGRY LVV  D AVYA G ARPTGGA AV MLVGP+AP+AFE  LR
Sbjct:   135 ALFNAVNWVESSSWDGRYALVVAGDIAVYATGSARPTGGAGAVAMLVGPNAPLAFERGLR 194

Query:   183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYE---KLEGKQ--FS 237
             G+HM HAYDFYKP++ SEYPVVDGKLS  CYL ALD CY    +K     + EG +   S
Sbjct:   195 GTHMQHAYDFYKPDMVSEYPVVDGKLSIQCYLSALDQCYSVYKNKIHARWQREGTEGRCS 254

Query:   238 LSNADYFVFHSPYNKLVQKSFARLLFNDFMRNAS-SVDEAAKEKLGPFSTLSGDESYQSR 296
             L +  + VFHSPY KLVQKS ARL+ NDF+ + S +++      L  F  +  +++Y  R
Sbjct:   255 LEDFGFMVFHSPYCKLVQKSLARLMLNDFLCHPSPNMESGPFSGLEAFRDVKIEDTYFDR 314

Query:   297 DLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXXI-HNKHSELDGKRVVLF 355
             D+EK   + +  L+D K + S LI  Q GNMYT          +  +   +L G+R+ +F
Sbjct:   315 DVEKAFMKASSELFDDKTKASLLISNQNGNMYTPSVYGCLASVLAQHTPQQLAGQRIGVF 374

Query:   356 SYGSGLTATMFSLKLSEGHHPFS-LSNILSVM-NVAGKLKSRHEV 398
             SYGSG  AT++S+K+++   P S L  ++S + ++  +L SR +V
Sbjct:   375 SYGSGFAATLYSIKVTQDGTPGSALDKLVSSLCDLPARLDSRQKV 419

GO:0003824 "catalytic activity" evidence=IEA

GO:0004421 "hydroxymethylglutaryl-CoA synthase activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0008299 "isoprenoid biosynthetic process" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

MGI|MGI:107592 Hmgcs1 "3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1" [Mus musculus (taxid:10090)]

 Score = 1034 (369.0 bits), Expect = 2.0e-104, P = 2.0e-104
 Identities = 208/402 (51%), Positives = 277/402 (68%)

Query:     3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
             K+VGI+A++IYFP   V Q  LE +DG   GKYTIGLGQ  M FC++ ED+ S+ LT V 
Sbjct:    15 KDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQARMGFCTDREDINSLCLTVVQ 74

Query:    63 NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTA 122
              L+E++ +    IGRLEVG+ET+IDKSKS+K+ LMQ+FE+ GNTDIEG+D+TNACYGGTA
Sbjct:    75 KLMERHSLSYDCIGRLEVGTETIIDKSKSVKSNLMQLFEESGNTDIEGIDTTNACYGGTA 134

Query:   123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLR 182
             A+FN VNWVESSSWDGRY LVV  D A+YA G ARPTGG  AV +L+GP+AP+ F+  LR
Sbjct:   135 AVFNAVNWVESSSWDGRYALVVAGDIAIYATGNARPTGGVGAVALLIGPNAPLIFDRGLR 194

Query:   183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCY----KCLCSKYEKLEGKQ--F 236
             G+HM HAYDFYKP++ SEYPVVDGKLS  CYL ALD CY    K + ++++K EGK   F
Sbjct:   195 GTHMQHAYDFYKPDMLSEYPVVDGKLSIQCYLSALDRCYSVYRKKIRAQWQK-EGKDKDF 253

Query:   237 SLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSR 296
             +L++  + +FHSPY KLVQKS AR+  NDF+ + +    +    L  F  +  +++Y  R
Sbjct:   254 TLNDFGFMIFHSPYCKLVQKSLARMFLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDR 313

Query:   297 DLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXXIHN-KHSELDGKRVVLF 355
             D+EK   + +  L++ K + S L+  Q GNMYT          +      +L GKRV +F
Sbjct:   314 DVEKAFMKASSELFNQKTKASLLVSNQNGNMYTSSVYGSLASVLAQYSPQQLAGKRVGVF 373

Query:   356 SYGSGLTATMFSLKLSEGHHPFS-LSNIL-SVMNVAGKLKSR 395
             SYGSGL AT++SLK+++   P S L  I  S+ ++  +L SR
Sbjct:   374 SYGSGLAATLYSLKVTQDATPGSALDKITASLCDLKSRLDSR 415

GO:0003824 "catalytic activity" evidence=IEA

GO:0004421 "hydroxymethylglutaryl-CoA synthase activity" evidence=ISO

GO:0005737 "cytoplasm" evidence=IEA

GO:0005829 "cytosol" evidence=ISO

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0006695 "cholesterol biosynthetic process" evidence=IEA

GO:0008144 "drug binding" evidence=ISO

GO:0008152 "metabolic process" evidence=IEA

GO:0008202 "steroid metabolic process" evidence=IEA

GO:0008203 "cholesterol metabolic process" evidence=IEA

GO:0008299 "isoprenoid biosynthetic process" evidence=IEA

GO:0010243 "response to organic nitrogen" evidence=ISO

GO:0016126 "sterol biosynthetic process" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016853 "isomerase activity" evidence=ISO

GO:0042803 "protein homodimerization activity" evidence=ISO

GO:0043177 "organic acid binding" evidence=ISO

UNIPROTKB|F1N9T0 HMGCS1 "Hydroxymethylglutaryl-CoA synthase, cytoplasmic" [Gallus gallus (taxid:9031)]

 Score = 1032 (368.3 bits), Expect = 3.2e-104, P = 3.2e-104
 Identities = 211/403 (52%), Positives = 276/403 (68%)

Query:     3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
             K+VGI+A++IYFP   V Q  LE +DG   GKYTIGLGQ  M FCS+ ED+ S+ LT V 
Sbjct:    15 KDVGIVALEIYFPSQYVDQTELEKYDGVDAGKYTIGLGQSKMGFCSDREDINSLCLTVVQ 74

Query:    63 NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTA 122
              L+E+  +    IGRLEVG+ET+IDKSKS+KT LMQ+FE+ GNTD+EG+D+TNACYGGTA
Sbjct:    75 KLMERNSLSYDCIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDVEGIDTTNACYGGTA 134

Query:   123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLR 182
             ALFN +NW+ESSSWDGRY LVV  D AVYA G ARPTGGA AV MLVGP+AP+ FE  LR
Sbjct:   135 ALFNAINWIESSSWDGRYALVVAGDIAVYATGNARPTGGAGAVAMLVGPNAPLIFERGLR 194

Query:   183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYE---KLEG--KQFS 237
             G+HM HAYDFYKP++ SEYPVVDGKLS  CYL ALD CY    +K     + EG  ++F+
Sbjct:   195 GTHMQHAYDFYKPDMVSEYPVVDGKLSIQCYLSALDRCYSVYRNKIHAQWQKEGTDRRFT 254

Query:   238 LSNADYFVFHSPYNKLVQKSFARLLFNDFM--RNASSVDEAAKEKLGPFSTLSGDESYQS 295
             L++  + +FHSPY KLVQKS ARLL NDF+  +NA + +      L  F  +  +++Y  
Sbjct:   255 LNDFGFMIFHSPYCKLVQKSVARLLLNDFLSDQNAETAN-GVFSGLEAFRDVKLEDTYFD 313

Query:   296 RDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXXIHNKHSE-LDGKRVVL 354
             RD+EK   + +  L++ K + S L+  Q GNMYT          +     E L G+R+ +
Sbjct:   314 RDVEKAFMKASAELFNQKTKASLLVSNQNGNMYTPSVYGCLASLLAQYSPEHLAGQRISV 373

Query:   355 FSYGSGLTATMFSLKLSEGHHPFS-LSNIL-SVMNVAGKLKSR 395
             FSYGSG  AT++S+++++   P S L  I  S+ ++  +L SR
Sbjct:   374 FSYGSGFAATLYSIRVTQDATPGSALDKITASLSDLKARLDSR 416

GO:0004421 "hydroxymethylglutaryl-CoA synthase activity" evidence=IEA

GO:0008299 "isoprenoid biosynthetic process" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

UNIPROTKB|F1NTT0 HMGCS1 "Hydroxymethylglutaryl-CoA synthase, cytoplasmic" [Gallus gallus (taxid:9031)]

 Score = 1032 (368.3 bits), Expect = 3.2e-104, P = 3.2e-104
 Identities = 211/403 (52%), Positives = 276/403 (68%)

Query:     3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
             K+VGI+A++IYFP   V Q  LE +DG   GKYTIGLGQ  M FCS+ ED+ S+ LT V 
Sbjct:    18 KDVGIVALEIYFPSQYVDQTELEKYDGVDAGKYTIGLGQSKMGFCSDREDINSLCLTVVQ 77

Query:    63 NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTA 122
              L+E+  +    IGRLEVG+ET+IDKSKS+KT LMQ+FE+ GNTD+EG+D+TNACYGGTA
Sbjct:    78 KLMERNSLSYDCIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDVEGIDTTNACYGGTA 137

Query:   123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLR 182
             ALFN +NW+ESSSWDGRY LVV  D AVYA G ARPTGGA AV MLVGP+AP+ FE  LR
Sbjct:   138 ALFNAINWIESSSWDGRYALVVAGDIAVYATGNARPTGGAGAVAMLVGPNAPLIFERGLR 197

Query:   183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYE---KLEG--KQFS 237
             G+HM HAYDFYKP++ SEYPVVDGKLS  CYL ALD CY    +K     + EG  ++F+
Sbjct:   198 GTHMQHAYDFYKPDMVSEYPVVDGKLSIQCYLSALDRCYSVYRNKIHAQWQKEGTDRRFT 257

Query:   238 LSNADYFVFHSPYNKLVQKSFARLLFNDFM--RNASSVDEAAKEKLGPFSTLSGDESYQS 295
             L++  + +FHSPY KLVQKS ARLL NDF+  +NA + +      L  F  +  +++Y  
Sbjct:   258 LNDFGFMIFHSPYCKLVQKSVARLLLNDFLSDQNAETAN-GVFSGLEAFRDVKLEDTYFD 316

Query:   296 RDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXXIHNKHSE-LDGKRVVL 354
             RD+EK   + +  L++ K + S L+  Q GNMYT          +     E L G+R+ +
Sbjct:   317 RDVEKAFMKASAELFNQKTKASLLVSNQNGNMYTPSVYGCLASLLAQYSPEHLAGQRISV 376

Query:   355 FSYGSGLTATMFSLKLSEGHHPFS-LSNIL-SVMNVAGKLKSR 395
             FSYGSG  AT++S+++++   P S L  I  S+ ++  +L SR
Sbjct:   377 FSYGSGFAATLYSIRVTQDATPGSALDKITASLSDLKARLDSR 419

GO:0004421 "hydroxymethylglutaryl-CoA synthase activity" evidence=IEA

GO:0008299 "isoprenoid biosynthetic process" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5R7Z9	HMCS1_PONAB	2, ., 3, ., 3, ., 1, 0	0.5272	0.8878	0.7615	yes	no
P54873	HMCS_ARATH	2, ., 3, ., 3, ., 1, 0	0.8387	0.8901	0.8611	yes	no
P54872	HMCSA_DICDI	2, ., 3, ., 3, ., 1, 0	0.5252	0.8699	0.8049	yes	no
Q8JZK9	HMCS1_MOUSE	2, ., 3, ., 3, ., 1, 0	0.5248	0.8789	0.7538	yes	no
P54870	HMCS2_BLAGE	2, ., 3, ., 3, ., 1, 0	0.5195	0.8295	0.8131	N/A	no
P54874	HMCS_SCHPO	2, ., 3, ., 3, ., 1, 0	0.4824	0.8609	0.8590	yes	no
Q01581	HMCS1_HUMAN	2, ., 3, ., 3, ., 1, 0	0.5272	0.8878	0.7615	yes	no
P54871	HMCS_CAEEL	2, ., 3, ., 3, ., 1, 0	0.3857	0.8452	0.8160	yes	no
P54839	HMCS_YEAST	2, ., 3, ., 3, ., 1, 0	0.5024	0.8542	0.7759	yes	no
P17425	HMCS1_RAT	2, ., 3, ., 3, ., 1, 0	0.5223	0.8789	0.7538	yes	no
P54961	HMCS1_BLAGE	2, ., 3, ., 3, ., 1, 0	0.5361	0.8744	0.8609	N/A	no
P13704	HMCS1_CRIGR	2, ., 3, ., 3, ., 1, 0	0.5149	0.8789	0.7538	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.3.3	0.983
3rd Layer	2.3.3.10	0.979

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00001077001	SubName- Full=Chromosome chr2 scaffold_112, whole genome shotgun sequence; (464 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00001656001	SubName- Full=Chromosome undetermined scaffold_119, whole genome shotgun sequence; (242 aa)	•		•	•			•		0.883
	GSVIVG00029076001	SubName- Full=Chromosome chr12 scaffold_47, whole genome shotgun sequence; (381 aa)	•			•		•	•		0.567
	GSVIVG00022848001	SubName- Full=Chromosome chr14 scaffold_27, whole genome shotgun sequence; (388 aa)			•	•			•		0.543
	GSVIVG00006002001	SubName- Full=Chromosome chr4 scaffold_162, whole genome shotgun sequence; (552 aa)	•					•	•		0.499
	GSVIVG00033429001	SubName- Full=Chromosome chr19 scaffold_66, whole genome shotgun sequence; (341 aa)				•			•		0.481
	GSVIVG00002942001	SubName- Full=Chromosome chr18 scaffold_137, whole genome shotgun sequence; (550 aa)	•					•	•		0.473
	GSVIVG00036301001	SubName- Full=Chromosome chr3 scaffold_8, whole genome shotgun sequence; (575 aa)	•					•	•		0.458
	GSVIVG00035946001	SubName- Full=Chromosome chr3 scaffold_8, whole genome shotgun sequence; (413 aa)				•			•		0.411

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	446
PLN02577	459	PLN02577, PLN02577, hydroxymethylglutaryl-CoA synt	0.0
TIGR01833	457	TIGR01833, HMG-CoA-S_euk, 3-hydroxy-3-methylglutar	0.0
pfam08540	282	pfam08540, HMG_CoA_synt_C, Hydroxymethylglutaryl-c	1e-114
COG3425	377	COG3425, PksG, 3-hydroxy-3-methylglutaryl CoA synt	3e-96
pfam01154	171	pfam01154, HMG_CoA_synt_N, Hydroxymethylglutaryl-c	4e-93
cd00827	324	cd00827, init_cond_enzymes, "initiating" condensin	3e-86
TIGR01835	379	TIGR01835, HMG-CoA-S_prok, 3-hydroxy-3-methylgluta	5e-51
TIGR00748	345	TIGR00748, HMG_CoA_syn_Arc, hydroxymethylglutaryl-	5e-16
PRK04262	347	PRK04262, PRK04262, hypothetical protein; Provisio	7e-15
COG0332	323	COG0332, FabH, 3-oxoacyl-[acyl-carrier-protein]	1e-08

>gnl|CDD|178189 PLN02577, PLN02577, hydroxymethylglutaryl-CoA synthase

 Score =  831 bits (2148), Expect = 0.0
 Identities = 341/398 (85%), Positives = 370/398 (92%)

Query: 1   MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTA 60
           M KNVGILAM++YFPPTCVQQEALEAHDG SKGKYTIGLGQ+CMAFC++VEDVISMSLT 
Sbjct: 1   MPKNVGILAMEVYFPPTCVQQEALEAHDGVSKGKYTIGLGQDCMAFCTDVEDVISMSLTV 60

Query: 61  VTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGG 120
           V +LLEKY IDPKQIGRLEVGSETVIDKSKSIKTFLMQ+FE+ GNTDIEGVDSTNACYGG
Sbjct: 61  VKSLLEKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEESGNTDIEGVDSTNACYGG 120

Query: 121 TAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESK 180
           TAAL NCVNWVESSSWDGRYGLVV  DSAVYAEGPARPTGGA AV MLVGP+AP+ FESK
Sbjct: 121 TAALLNCVNWVESSSWDGRYGLVVAADSAVYAEGPARPTGGAGAVAMLVGPNAPIVFESK 180

Query: 181 LRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSN 240
            RGSHM+H YDFYKP+LASEYPVVDGKLSQTCYLMALD+CYK  C KYEKLEGKQFS+S+
Sbjct: 181 YRGSHMAHVYDFYKPDLASEYPVVDGKLSQTCYLMALDSCYKRFCEKYEKLEGKQFSISD 240

Query: 241 ADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEK 300
           ADYFVFH+PYNKLVQKSFARL++NDF RNASSVDE AKEKL PF+ LS DESYQ+RDLEK
Sbjct: 241 ADYFVFHAPYNKLVQKSFARLVYNDFQRNASSVDEDAKEKLAPFAGLSSDESYQNRDLEK 300

Query: 301 VSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSG 360
           VSQQ+AKPLYDAKVQP+TLIPKQVGNMYTASLYAALASL+HNKHSEL GKR+++FSYGSG
Sbjct: 301 VSQQVAKPLYDAKVQPTTLIPKQVGNMYTASLYAALASLVHNKHSELAGKRILMFSYGSG 360

Query: 361 LTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEV 398
           LTATMFSL+L EG HPFSLSNI  VM+V+ KLKSRHEV
Sbjct: 361 LTATMFSLRLHEGQHPFSLSNIAKVMDVSEKLKSRHEV 398

Length = 459

>gnl|CDD|233591 TIGR01833, HMG-CoA-S_euk, 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade

 Score =  668 bits (1726), Expect = 0.0
 Identities = 251/406 (61%), Positives = 304/406 (74%), Gaps = 8/406 (1%)

Query: 1   MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTA 60
             K+VGILA++IYFP   V Q  LE +DG S GKYTIGLGQ  M FC++ ED+ S+ LT 
Sbjct: 1   WPKDVGILALEIYFPSQYVDQAELEKYDGVSAGKYTIGLGQTKMGFCTDREDINSLCLTV 60

Query: 61  VTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGG 120
           V+ L+E+Y ID  QIGRLEVG+ET+IDKSKS+KT LMQ+FE+ GNTD+EG+D+TNACYGG
Sbjct: 61  VSKLMERYNIDYDQIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDVEGIDTTNACYGG 120

Query: 121 TAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESK 180
           TAALFN +NW+ESSSWDGRY LVV  D AVYA+G ARPTGGA AV ML+GP+AP+ FE  
Sbjct: 121 TAALFNAINWIESSSWDGRYALVVAGDIAVYAKGNARPTGGAGAVAMLIGPNAPIVFERG 180

Query: 181 LRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQ----- 235
           LRGSHM HAYDFYKP+LASEYPVVDGKLS  CYL ALD CYK  C K EK  GK      
Sbjct: 181 LRGSHMQHAYDFYKPDLASEYPVVDGKLSIQCYLSALDRCYKSYCKKIEKQWGKSGSDRK 240

Query: 236 FSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQS 295
           F+L + DY +FHSPY KLVQKS ARLL+NDF+RN SS D +  E L   S L  +++Y  
Sbjct: 241 FTLDDFDYMIFHSPYCKLVQKSLARLLYNDFLRNPSSTDTSLYEGLEALSGLKLEDTYTD 300

Query: 296 RDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHS-ELDGKRVVL 354
           RDLEK   + +K L+D K +PS L+P QVGNMYTASLY  LASL+ +K + EL GKRV +
Sbjct: 301 RDLEKAFMKASKELFDKKTKPSLLVPTQVGNMYTASLYGCLASLLSSKSAQELAGKRVGM 360

Query: 355 FSYGSGLTATMFSLKLSEGHHPFSLSN--ILSVMNVAGKLKSRHEV 398
           FSYGSGL A+MFSL++S+   P S  +  I S+ ++  +L SRH V
Sbjct: 361 FSYGSGLAASMFSLRVSQDASPGSALDKLIASLSDLKNRLDSRHCV 406

Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes. Length = 457

>gnl|CDD|219892 pfam08540, HMG_CoA_synt_C, Hydroxymethylglutaryl-coenzyme A synthase C terminal

 Score =  336 bits (863), Expect = e-114
 Identities = 133/231 (57%), Positives = 160/231 (69%), Gaps = 7/231 (3%)

Query: 175 VAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLE-- 232
           + F+  LRGSHM HAYDFYKP+L SEYPVVDGKLS  CYL ALD+CYK  C K EK    
Sbjct: 1   IVFDRGLRGSHMEHAYDFYKPDLTSEYPVVDGKLSLQCYLKALDSCYKNYCKKIEKQTKD 60

Query: 233 -GKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASS-VDEAAKEKLGPFSTLSGD 290
            G +F L + DY +FHSPY KLVQKS ARLL+NDF+RN SS       EKL     L  +
Sbjct: 61  GGTKFGLDDFDYVIFHSPYCKLVQKSLARLLYNDFLRNPSSDKGNGVYEKLEALGGLKLE 120

Query: 291 ESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLI-HNKHSELDG 349
           +SY  RDLEK   QL+KPL+  K +PS L+P QVGNMYTASLYAALASL+ H    EL G
Sbjct: 121 DSYTDRDLEKAFMQLSKPLFKKKTKPSLLLPTQVGNMYTASLYAALASLLSHVSADELAG 180

Query: 350 KRVVLFSYGSGLTATMFSLKLSEGHHPFSL--SNILSVMNVAGKLKSRHEV 398
           KR+ +FSYGSGL A++FSL++S+   P S+    I  V+++  KL SRH V
Sbjct: 181 KRIGMFSYGSGLAASLFSLRVSQDVSPGSILQKLITKVLDLKNKLDSRHCV 231

Length = 282

>gnl|CDD|225959 COG3425, PksG, 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]

 Score =  293 bits (753), Expect = 3e-96
 Identities = 115/396 (29%), Positives = 174/396 (43%), Gaps = 65/396 (16%)

Query: 4   NVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTN 63
            +GI+ +  Y P   ++ E L    G    K   GLG E  +     ED ++M++ A  N
Sbjct: 2   MIGIVGIGAYIPRYRIKLEELARAWGVDPEKIKKGLGVEEKSVPPWDEDAVTMAVEAARN 61

Query: 64  LLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAA 123
            L++  IDP +IG + VGSE+  D  K   T + +      N      D   ACY GTAA
Sbjct: 62  ALKRADIDPSKIGAVIVGSESGPDAVKPTATIVAEALG--LNPSARAADVEFACYAGTAA 119

Query: 124 LFNCVNWVESSSWDGRYGLVVCTDSAVYAEG-PARPTGGAAAVVMLVGPDAPVAFESKLR 182
           L   + WVES      YGLV+  D+A YA G     T GA AV  L+G + P+  E +  
Sbjct: 120 LQAAIGWVESGMIS--YGLVIGADTAQYAPGDALEYTAGAGAVAFLIGKNPPIVAEFEGT 177

Query: 183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNAD 242
           GS+ +   DF++P+    YP VDG+ S+  Y   ++   K    K         S  + D
Sbjct: 178 GSYTTDTPDFWRPDG-QPYPYVDGRFSEPAYFKHVENAAKGYMEKT------GLSPDDFD 230

Query: 243 YFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVS 302
           Y VFH P  K  +K+   L F                                       
Sbjct: 231 YIVFHQPNGKFPKKAAKSLGFK-------------------------------------- 252

Query: 303 QQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLT 362
                   + +V+P  + P+++GN YT SL   LASL+   +++L G R++LFSYGSG  
Sbjct: 253 --------EEQVKPGLVYPQRIGNTYTGSLLLGLASLL--DNAKLPGDRILLFSYGSGAG 302

Query: 363 ATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEV 398
           +  FS+ +++G     +      +     L+ R+ +
Sbjct: 303 SEAFSITVTDG-----IEERRKKLAPTVLLEQRNRL 333

Length = 377

>gnl|CDD|110176 pfam01154, HMG_CoA_synt_N, Hydroxymethylglutaryl-coenzyme A synthase N terminal

 Score =  278 bits (712), Expect = 4e-93
 Identities = 113/171 (66%), Positives = 138/171 (80%)

Query: 4   NVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTN 63
           +VGI+A++IYFP   V Q  LE +DG S GKYTIGLGQ  M FC++ ED+ S+ LT V  
Sbjct: 1   DVGIVALEIYFPSQYVDQAELEKYDGVSAGKYTIGLGQTKMGFCTDREDINSLCLTVVQK 60

Query: 64  LLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAA 123
           L+E+  +D   IGRLEVG+ET+IDKSKS+KT LMQ+FE+ GNTDIEG+D+TNACYGGTAA
Sbjct: 61  LMERNNLDYDCIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDIEGIDTTNACYGGTAA 120

Query: 124 LFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAP 174
           LFN +NW+ESSSWDGRY LVV  D A+YA+G ARPTGGA AV ML+GP+AP
Sbjct: 121 LFNALNWIESSSWDGRYALVVAGDIAIYAKGNARPTGGAGAVAMLIGPNAP 171

Length = 171

>gnl|CDD|238423 cd00827, init_cond_enzymes, "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes

 Score =  266 bits (681), Expect = 3e-86
 Identities = 127/378 (33%), Positives = 166/378 (43%), Gaps = 67/378 (17%)

Query: 4   NVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTN 63
           +VGI A+  Y P   V  E L    G   GKYT G+GQ  MA     EDV +M++ A   
Sbjct: 1   DVGIEAIGAYLPRYRVDNEELAEGLGVDPGKYTTGIGQRHMAGD--DEDVPTMAVEAARR 58

Query: 64  LLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAA 123
            LE+  IDP  IG L V +E+ IDK KS  T+L    E  G T+ E  D   ACYGGTAA
Sbjct: 59  ALERAGIDPDDIGLLIVATESPIDKGKSAATYLA---ELLGLTNAEAFDLKQACYGGTAA 115

Query: 124 LFNCVNWVESSSWDGRYGLVVCTDSAVYAE---GPARPTGGAAAVVMLVGPDAPVAFESK 180
           L    N VES  W  RY LVV +D A Y         PT G  A  MLV  +  +   + 
Sbjct: 116 LQLAANLVESGPW--RYALVVASDIASYLLDEGSALEPTLGDGAAAMLVSRNPGILA-AG 172

Query: 181 LRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSN 240
           +  +H +    +      S YPV+DG   + C L                    + +   
Sbjct: 173 IVSTHSTSDPGYDF----SPYPVMDGGYPKPCKL----------------AYAIRLTAEP 212

Query: 241 ADYFVF---HSPYNKLVQKSFARLLFNDFMR-------NASSVDEAAKEKLGPFSTLSGD 290
           A   VF   H    K+V+K+  R   ++ +        N   + EA  +KLG        
Sbjct: 213 AGRAVFEAAHKLIAKVVRKALDRAGLSEDIDYFVPHQPNGKKILEAVAKKLGGP------ 266

Query: 291 ESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGK 350
                   EK SQ               ++ ++VGNMY AS+   LASL+ +      G 
Sbjct: 267 -------PEKASQTR------------WILLRRVGNMYAASILLGLASLLES-GKLKAGD 306

Query: 351 RVVLFSYGSGLTATMFSL 368
           RV+LFSYGSG TA  F L
Sbjct: 307 RVLLFSYGSGFTAEAFVL 324

They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues. Length = 324

>gnl|CDD|213655 TIGR01835, HMG-CoA-S_prok, 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade

 Score =  176 bits (448), Expect = 5e-51
 Identities = 106/374 (28%), Positives = 164/374 (43%), Gaps = 59/374 (15%)

Query: 5   VGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNL 64
           +GI  +  + P   +   AL    G    K+ IG+GQ+ MA     ED+++M+ +A   +
Sbjct: 1   IGIDKISFFTPQNYLDMTALAEARGVDPEKFHIGIGQKKMAVPPIDEDIVTMAASAAKPI 60

Query: 65  LEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEG----VDSTNACYGG 120
           L++   D ++I  +  G+E+ ID+SK+   ++       G   ++      +   ACYG 
Sbjct: 61  LDRN--DKQKIDMVIFGTESGIDQSKAAAVYV------HGLLGLQPFCRSFELKQACYGA 112

Query: 121 TAALFNCVNWVESSSWDGRYGLVVCTDSAVYA-EGPARPTGGAAAVVMLVGPDAPVAFES 179
           TAAL      V  S    R  LV+ +D A Y  E P  PT GA AV MLV  D  +   +
Sbjct: 113 TAALQMAKGHVALSP--DRKVLVIASDIAKYGLESPGEPTQGAGAVAMLVSADPKLLAIN 170

Query: 180 KLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLS 239
           +    +     DF++PN  S   +VDG+ S   YL A +  +       +  +    SL+
Sbjct: 171 EDSVLYTDDIMDFWRPN-YSTTALVDGQYSNEQYLNAFENAWN------DYAKRTGLSLA 223

Query: 240 NADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLE 299
           +   F FH P+ K+  K+   +L     +N    DE+ +                     
Sbjct: 224 DFAAFCFHVPFTKMGLKALRHIL----KKNYEDEDESVQNAYL----------------- 262

Query: 300 KVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGS 359
                            S +  ++VGN+YT SLY  LASL+ N   +  G ++ LFSYGS
Sbjct: 263 ----------------ESIIYNREVGNLYTGSLYLGLASLLENAFEDTTGDKIGLFSYGS 306

Query: 360 GLTATMFSLKLSEG 373
           G  A  FS  L  G
Sbjct: 307 GAVAEFFSGTLVAG 320

This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event. Length = 379

>gnl|CDD|129831 TIGR00748, HMG_CoA_syn_Arc, hydroxymethylglutaryl-CoA synthase, putative

 Score = 78.8 bits (194), Expect = 5e-16
 Identities = 92/371 (24%), Positives = 143/371 (38%), Gaps = 66/371 (17%)

Query: 5   VGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNL 64
            GI+    Y P   ++ E +    G      + GL  E  A     ED  ++ + A  N 
Sbjct: 2   AGIVGYGAYIPMYRIKVEEIARVWGKDPESISNGLPVEEKAVPGLDEDTATIGVEAARNA 61

Query: 65  LEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNT-DIEGVDSTNACYGGTAA 123
           L++ KIDPK IG + VGSE+      ++K     + E  G T D+   D   AC  GTA 
Sbjct: 62  LKRAKIDPKDIGAVYVGSES---HPYAVKPTATIVAEAIGATPDLTAADLEFACKAGTAG 118

Query: 124 LFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPA-RPTGGAAAVVMLVGPDAPVAFESKLR 182
           +  C+  V S     +YGL +  D+A  A G A   T GA     ++G    VA   +  
Sbjct: 119 IQACMGLVASGM--IKYGLAIGADTAQGAPGDALEYTAGAGGAAYIIGEKNTVA-YFEGT 175

Query: 183 GSHMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDTCYKCLCSKYEKLEGKQFSLSNA 241
            S+ +   DF++      YP   G+ + +  Y   + T  K L      +E    +  + 
Sbjct: 176 YSYTTDTPDFWRRE-GEPYPRHGGRFTGEPAYFHHVVTAAKGL------MEKLGLTPEDF 228

Query: 242 DYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKV 301
           DY VFH P  K                        A   LG                   
Sbjct: 229 DYAVFHQPNGKFYLV--------------------AARMLG------------------- 249

Query: 302 SQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGL 361
                      +V+P  L P+ +GN Y+ +    L++++        G R++  SYGSG 
Sbjct: 250 -------FPKEQVKPGLLTPR-IGNTYSGATPVGLSAVLDIAEP---GDRILAVSYGSGA 298

Query: 362 TATMFSLKLSE 372
            +  FS+ + +
Sbjct: 299 GSDAFSIVVQD 309

This family of archaeal proteins shows considerable homology and identical active site residues to the bacterial hydroxymethylglutaryl-CoA synthase (HMG-CoA synthase, modeled by TIGR01835) which is the second step in the mevalonate pathway of IPP biosynthesis. An enzyme from Pseudomonas fluorescens involved in the biosynthesis of the polyketide diacetyl-phloroglucinol is more closely related, but lacks the active site residues. In each of the genomes containing a member of this family there is no other recognized HMG-CoA synthase, although other elements of the mevalonate pathway are in evidence. The only archaeon currently sequenced which lacks a homolog in this pathway is Halobacterium, which _does_ contain a separate HMG-CoA synthase. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 345

>gnl|CDD|235266 PRK04262, PRK04262, hypothetical protein; Provisional

 Score = 75.3 bits (186), Expect = 7e-15
 Identities = 97/378 (25%), Positives = 149/378 (39%), Gaps = 76/378 (20%)

Query: 3   KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
             VGI+    Y P   ++ E +    G        GLG E  +     ED  ++++ A  
Sbjct: 1   MMVGIVGYGAYIPRYRIKVEEIARVWGDDPEAIKRGLGVEEKSVPGPDEDTATIAVEAAR 60

Query: 63  NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNT-DIEGVDSTNACYGGT 121
           N L++  IDPK+IG + VGSE+     K   T    + E  G T D+   D   AC  GT
Sbjct: 61  NALKRAGIDPKEIGAVYVGSESHPYAVKPTATI---VAEALGATPDLTAADLEFACKAGT 117

Query: 122 AALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPA-RPTGGAAAVVMLVGPDAPVA-FES 179
           AAL   +  V+S     +Y L +  D+A  A G A   T  A     ++G +  +A  E+
Sbjct: 118 AALQAAMGLVKSGM--IKYALAIGADTAQGAPGDALEYTAAAGGAAFIIGKEEVIAEIEA 175

Query: 180 KLRGSHMSHAYDFYKPNLASEYPVVDGKL-SQTCYLMALDTCYKCLCSKYEKLEGKQFSL 238
               S+ +   DF++      YP   G+   +  Y   + +  K L  K           
Sbjct: 176 TY--SYTTDTPDFWRRE-GEPYPRHGGRFTGEPAYFKHIISAAKGLMEKLGL------KP 226

Query: 239 SNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDL 298
           S+ DY VFH P  K   +                    AK  LG F+             
Sbjct: 227 SDYDYAVFHQPNGKFPLR-------------------VAK-MLG-FT------------- 252

Query: 299 EKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELD----GKRVVL 354
                         +V+P  L P  +GN Y+ S    LA++       LD    G R+++
Sbjct: 253 ------------KEQVKPGLLTPY-IGNTYSGSALLGLAAV-------LDVAKPGDRILV 292

Query: 355 FSYGSGLTATMFSLKLSE 372
            S+GSG  +  FS+ +++
Sbjct: 293 VSFGSGAGSDAFSITVTD 310

Length = 347

>gnl|CDD|223409 COG0332, FabH, 3-oxoacyl-[acyl-carrier-protein]

 Score = 56.1 bits (136), Expect = 1e-08
 Identities = 76/373 (20%), Positives = 110/373 (29%), Gaps = 75/373 (20%)

Query: 4   NVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTN 63
           N  IL +  Y P   V    LE     S        G       ++ E    +++ A   
Sbjct: 3   NAKILGIGSYLPERVVTNADLEKRVDTSDEWIETRTGIRERRIAADDETTSDLAVEAARK 62

Query: 64  LLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAA 123
            LE   I P  I  + V + T      S       +  + G       D   AC G   A
Sbjct: 63  ALEDAGISPDDIDLIIVATSTPDHLFPSTAC---LVQARLGLGGAPAFDLQAACSGFLYA 119

Query: 124 LFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPA-RPTG-----GAAAVVMLVGPDAP--- 174
           L      + S     +  LVV  ++         R T      GA AVV  +        
Sbjct: 120 LSVADGLIRSGG--YKNVLVVGAETLSRILDWTDRDTCVLFGDGAGAVV--LEATEDDNG 175

Query: 175 -VAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQ---TCYLMALDTCYKCLCSKYEK 230
            +  +    GS     Y     +   +     G L       +  A+    K +    E 
Sbjct: 176 ILDTDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVMDGREVFKFAVRAMPKAI---EEV 232

Query: 231 LEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGD 290
           LE    +  + D+FV H                N  +       EA  +KLG        
Sbjct: 233 LEKAGLTPEDIDWFVPHQA--------------NLRII------EAIAKKLG------IP 266

Query: 291 ESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSEL-DG 349
           E       EKV   + K                 GN   AS+  AL   +      +  G
Sbjct: 267 E-------EKVVVTVDK----------------YGNTSAASIPLALDEALREG--RIKPG 301

Query: 350 KRVVLFSYGSGLT 362
             V+L ++G GLT
Sbjct: 302 DLVLLEAFGGGLT 314

Length = 323

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	446
KOG1393	462	consensus Hydroxymethylglutaryl-CoA synthase [Lipi	100.0
PLN02577	459	hydroxymethylglutaryl-CoA synthase	100.0
TIGR01833	454	HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth	100.0
COG3425	377	PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi	100.0
TIGR01835	379	HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt	100.0
COG0332	323	FabH 3-oxoacyl-[acyl-carrier-protein]	100.0
TIGR00748	345	HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase	100.0
PRK04262	347	hypothetical protein; Provisional	100.0
PF08540	282	HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A s	100.0
PRK05963	326	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
PF01154	174	HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s	100.0
PRK12879	325	3-oxoacyl-(acyl carrier protein) synthase III; Rev	100.0
PRK07204	329	3-oxoacyl-(acyl carrier protein) synthase III; Rev	100.0
PRK12880	353	3-oxoacyl-(acyl carrier protein) synthase III; Rev	100.0
CHL00203	326	fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr	100.0
PRK09258	338	3-oxoacyl-(acyl carrier protein) synthase III; Rev	100.0
PRK06840	339	hypothetical protein; Validated	100.0
PLN02326	379	3-oxoacyl-[acyl-carrier-protein] synthase III	100.0
TIGR00747	318	fabH 3-oxoacyl-(acyl-carrier-protein) synthase III	100.0
cd00830	320	KAS_III Ketoacyl-acyl carrier protein synthase III	100.0
PRK09352	319	3-oxoacyl-(acyl carrier protein) synthase III; Rev	100.0
PRK06816	378	3-oxoacyl-(acyl carrier protein) synthase III; Rev	100.0
PLN03169	391	chalcone synthase family protein; Provisional	100.0
cd00831	361	CHS_like Chalcone and stilbene synthases; plant-sp	100.0
cd00827	324	init_cond_enzymes "initiating" condensing enzymes	100.0
PLN03171	399	chalcone synthase-like protein; Provisional	100.0
PLN03172	393	chalcone synthase family protein; Provisional	100.0
PLN03168	389	chalcone synthase; Provisional	100.0
PLN03170	401	chalcone synthase; Provisional	100.0
PRK07515	372	3-oxoacyl-(acyl carrier protein) synthase III; Rev	100.0
PLN03173	391	chalcone synthase; Provisional	100.0
PLN02377	502	3-ketoacyl-CoA synthase	100.0
PLN02854	521	3-ketoacyl-CoA synthase	100.0
PLN02932	478	3-ketoacyl-CoA synthase	100.0
PLN02192	511	3-ketoacyl-CoA synthase	100.0
PLN00415	466	3-ketoacyl-CoA synthase	100.0
COG3424	356	BcsA Predicted naringenin-chalcone synthase [Secon	100.0
cd00327	254	cond_enzymes Condensing enzymes; Family of enzymes	99.95
cd00825	332	decarbox_cond_enzymes decarboxylating condensing e	99.91
PF00195	226	Chal_sti_synt_N: Chalcone and stilbene synthases,	99.89
PRK06147	348	3-oxoacyl-(acyl carrier protein) synthase; Validat	99.78
PF08392	290	FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-	99.75
PF08541	90	ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC	99.7
TIGR02845	327	spore_V_AD stage V sporulation protein AD. Bacillu	99.68
PRK08304	337	stage V sporulation protein AD; Validated	99.61
cd00834	406	KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP)	99.57
smart00825	424	PKS_KS Beta-ketoacyl synthase. The structure of be	99.47
cd00829	375	SCP-x_thiolase Thiolase domain associated with ste	99.43
PRK09051	394	beta-ketothiolase; Provisional	99.42
PRK06064	389	acetyl-CoA acetyltransferase; Provisional	99.4
PRK05790	393	putative acyltransferase; Provisional	99.39
PRK12404	334	stage V sporulation protein AD; Provisional	99.33
cd00828	407	elong_cond_enzymes "elongating" condensing enzymes	99.33
PRK06501	425	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.32
cd00833	421	PKS polyketide synthases (PKSs) polymerize simple	99.31
cd00751	386	thiolase Thiolase are ubiquitous enzymes that cata	99.28
TIGR03150	407	fabF beta-ketoacyl-acyl-carrier-protein synthase I	99.28
PF02797	151	Chal_sti_synt_C: Chalcone and stilbene synthases,	99.25
TIGR01930	386	AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi	99.24
PRK08256	391	lipid-transfer protein; Provisional	99.21
PRK12578	385	acetyl-CoA acetyltransferase; Provisional	99.21
PF08545	80	ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)	99.19
PRK06445	394	acetyl-CoA acetyltransferase; Provisional	99.19
PRK07103	410	polyketide beta-ketoacyl:acyl carrier protein synt	99.19
PRK05656	393	acetyl-CoA acetyltransferase; Provisional	99.18
PRK08313	386	acetyl-CoA acetyltransferase; Provisional	99.17
PRK08722	414	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.16
PRK05952	381	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.16
PRK08235	393	acetyl-CoA acetyltransferase; Provisional	99.15
PRK06205	404	acetyl-CoA acetyltransferase; Provisional	99.13
PRK07108	392	acetyl-CoA acetyltransferase; Provisional	99.13
PRK09116	405	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.11
PRK06059	399	lipid-transfer protein; Provisional	99.1
PRK09052	399	acetyl-CoA acetyltransferase; Provisional	99.1
PRK07314	411	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.07
PRK08242	402	acetyl-CoA acetyltransferase; Validated	99.07
PRK06333	424	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.07
PRK09185	392	3-oxoacyl-(acyl carrier protein) synthase I; Revie	99.06
PRK08170	426	acetyl-CoA acetyltransferase; Provisional	99.05
PTZ00050	421	3-oxoacyl-acyl carrier protein synthase; Provision	99.04
PRK07967	406	3-oxoacyl-(acyl carrier protein) synthase I; Revie	99.03
PRK08439	406	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.03
PRK06065	392	acetyl-CoA acetyltransferase; Provisional	99.01
cd00826	393	nondecarbox_cond_enzymes nondecarboxylating conden	99.0
PLN02836	437	3-oxoacyl-[acyl-carrier-protein] synthase	99.0
PRK06954	397	acetyl-CoA acetyltransferase; Provisional	98.98
cd00832	399	CLF Chain-length factor (CLF) is a factor required	98.96
PRK06158	384	thiolase; Provisional	98.95
PRK06690	361	acetyl-CoA acetyltransferase; Provisional	98.95
PLN02787	540	3-oxoacyl-[acyl-carrier-protein] synthase II	98.94
PF00108	264	Thiolase_N: Thiolase, N-terminal domain; InterPro:	98.94
PRK07516	389	acetyl-CoA acetyltransferase; Provisional	98.92
PRK14691	342	3-oxoacyl-(acyl carrier protein) synthase II; Prov	98.91
PRK06289	403	acetyl-CoA acetyltransferase; Provisional	98.91
PLN02287	452	3-ketoacyl-CoA thiolase	98.87
PRK07661	391	acetyl-CoA acetyltransferase; Provisional	98.86
PRK07910	418	3-oxoacyl-(acyl carrier protein) synthase II; Revi	98.82
PRK06519	398	3-oxoacyl-(acyl carrier protein) synthase II; Revi	98.81
PRK07851	406	acetyl-CoA acetyltransferase; Provisional	98.79
PRK06157	398	acetyl-CoA acetyltransferase; Validated	98.75
PRK08963	428	fadI 3-ketoacyl-CoA thiolase; Reviewed	98.73
PRK06366	388	acetyl-CoA acetyltransferase; Provisional	98.72
PRK08131	401	acetyl-CoA acetyltransferase; Provisional	98.69
PLN02644	394	acetyl-CoA C-acetyltransferase	98.67
PRK07850	387	acetyl-CoA acetyltransferase; Provisional	98.67
PRK06365	430	acetyl-CoA acetyltransferase; Provisional	98.67
TIGR02446	430	FadI fatty oxidation complex, beta subunit FadI. T	98.66
PRK06633	392	acetyl-CoA acetyltransferase; Provisional	98.65
PRK09050	401	beta-ketoadipyl CoA thiolase; Validated	98.65
PRK13359	400	beta-ketoadipyl CoA thiolase; Provisional	98.64
PTZ00455	438	3-ketoacyl-CoA thiolase; Provisional	98.63
TIGR02430	400	pcaF beta-ketoadipyl CoA thiolase. Members of this	98.58
PRK06504	390	acetyl-CoA acetyltransferase; Provisional	98.57
PRK08947	387	fadA 3-ketoacyl-CoA thiolase; Reviewed	98.52
PRK08142	388	acetyl-CoA acetyltransferase; Provisional	98.5
PRK09268	427	acetyl-CoA acetyltransferase; Provisional	98.48
PRK07801	382	acetyl-CoA acetyltransferase; Provisional	98.46
PF00109	254	ketoacyl-synt: Beta-ketoacyl synthase, N-terminal	98.44
TIGR02445	385	fadA fatty oxidation complex, beta subunit FadA. T	98.43
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	98.41
PRK07855	386	lipid-transfer protein; Provisional	98.4
PF07451	329	SpoVAD: Stage V sporulation protein AD (SpoVAD); I	98.38
PRK08257	498	acetyl-CoA acetyltransferase; Validated	98.36
PRK06066	385	acetyl-CoA acetyltransferase; Provisional	98.28
PRK06025	417	acetyl-CoA acetyltransferase; Provisional	98.28
COG0304	412	FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li	98.26
PRK07937	352	lipid-transfer protein; Provisional	98.01
KOG1406	408	consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44	97.84
KOG1394	440	consensus 3-oxoacyl-(acyl-carrier-protein) synthas	97.57
COG3321	1061	Polyketide synthase modules and related proteins [	97.53
COG0183	392	PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis	97.35
KOG1390	396	consensus Acetyl-CoA acetyltransferase [Lipid tran	96.19
PRK06025	417	acetyl-CoA acetyltransferase; Provisional	96.11
KOG1391	396	consensus Acetyl-CoA acetyltransferase [Lipid tran	96.06
PF13723	218	Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina	96.04
KOG1392	465	consensus Acetyl-CoA acetyltransferase [Lipid tran	96.0
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	93.85
PF08541	90	ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC	93.72
KOG1389	435	consensus 3-oxoacyl CoA thiolase [Lipid transport	93.29
PRK07850	387	acetyl-CoA acetyltransferase; Provisional	92.32
TIGR00748	345	HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase	92.06
PRK13359	400	beta-ketoadipyl CoA thiolase; Provisional	91.92
PRK08242	402	acetyl-CoA acetyltransferase; Validated	91.69
PRK06205	404	acetyl-CoA acetyltransferase; Provisional	91.59
TIGR02430	400	pcaF beta-ketoadipyl CoA thiolase. Members of this	91.12
PRK06147	348	3-oxoacyl-(acyl carrier protein) synthase; Validat	90.8
cd00751	386	thiolase Thiolase are ubiquitous enzymes that cata	90.74
PLN02287	452	3-ketoacyl-CoA thiolase	90.51
PRK09052	399	acetyl-CoA acetyltransferase; Provisional	90.48
PRK05656	393	acetyl-CoA acetyltransferase; Provisional	90.26
PRK09050	401	beta-ketoadipyl CoA thiolase; Validated	89.9
PRK09051	394	beta-ketothiolase; Provisional	89.4
PRK07661	391	acetyl-CoA acetyltransferase; Provisional	89.29
PF02803	123	Thiolase_C: Thiolase, C-terminal domain; InterPro:	89.19
PRK06504	390	acetyl-CoA acetyltransferase; Provisional	88.38
PRK12578	385	acetyl-CoA acetyltransferase; Provisional	88.15
PRK06366	388	acetyl-CoA acetyltransferase; Provisional	87.38
PRK08235	393	acetyl-CoA acetyltransferase; Provisional	87.14
PRK08963	428	fadI 3-ketoacyl-CoA thiolase; Reviewed	86.79
PRK07516	389	acetyl-CoA acetyltransferase; Provisional	86.62
PRK12879	325	3-oxoacyl-(acyl carrier protein) synthase III; Rev	86.2
PRK05790	393	putative acyltransferase; Provisional	85.97
PRK07851	406	acetyl-CoA acetyltransferase; Provisional	85.77
PRK07204	329	3-oxoacyl-(acyl carrier protein) synthase III; Rev	85.71
PRK09258	338	3-oxoacyl-(acyl carrier protein) synthase III; Rev	85.16
PRK06690	361	acetyl-CoA acetyltransferase; Provisional	84.86
CHL00203	326	fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr	84.82
PRK04262	347	hypothetical protein; Provisional	84.4
PRK08257	498	acetyl-CoA acetyltransferase; Validated	83.77
PRK07108	392	acetyl-CoA acetyltransferase; Provisional	83.69
PRK06816	378	3-oxoacyl-(acyl carrier protein) synthase III; Rev	83.64
PRK06840	339	hypothetical protein; Validated	83.39
PRK05963	326	3-oxoacyl-(acyl carrier protein) synthase II; Revi	83.22
PF02801	119	Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina	82.97
PRK06289	403	acetyl-CoA acetyltransferase; Provisional	82.79
PLN02326	379	3-oxoacyl-[acyl-carrier-protein] synthase III	81.72
PF02801	119	Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina	80.99
cd00825	332	decarbox_cond_enzymes decarboxylating condensing e	80.37

>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism]

Probab=100.00  E-value=1.1e-92  Score=681.13  Aligned_cols=423  Identities=58%  Similarity=0.929  Sum_probs=391.2

Q ss_pred             CceeEEeEEEEecCCccccHHHHHHhcCCCcceeEEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEE
Q 013297            2 AKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVG   81 (446)
Q Consensus         2 ~~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~   81 (446)
                      |.+|||.+|.+|+|.++|+|+|++++.|++.+||++|+||.+|+||.++||+.+|+.+++++++++++++++.|++|.||
T Consensus         9 p~dvGI~aieiyfP~~yV~Q~elEk~d~vs~gKytIGLGq~~MgfcsdrEDi~Sl~ltvvs~Lmery~i~~~~IGRLEVG   88 (462)
T KOG1393|consen    9 PKDVGIIAIEIYFPSQYVDQEELEKFDGVSAGKYTIGLGQTQMGFCSDREDIISLSLTVVSRLMERYNIDPDSIGRLEVG   88 (462)
T ss_pred             ccccceeEEEEEcCccccChhhHhhcCCccccceEeccCcceecccCchhhhhhhhHHHHHHHHHHhCCChhhcceEEec
Confidence            67999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCccCCCCCCcccc
Q 013297           82 SETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGG  161 (446)
Q Consensus        82 T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~~~~~~~t~G  161 (446)
                      |||.+|.+||+.+.|+++|+.+|+.+++++|..|||+||++||.+|.+||++..||||.+|||++|++.|..+++|||+|
T Consensus        89 TETiiDKSKSVKt~LMqLF~~sgNtdIEGiDttnACYGGtaALfnavnWiESssWDGr~aivV~gDIAvY~~G~aRpTGG  168 (462)
T KOG1393|consen   89 TETIIDKSKSVKTVLMQLFEESGNTDIEGIDTTNACYGGTAALFNAVNWIESSSWDGRYAIVVCGDIAVYAKGNARPTGG  168 (462)
T ss_pred             ceeccccchHHHHHHHHHhhhcCCCccccccccccccccHHHHHHHhhhhhhcccCCceeEEEEeeEEEecCCCCCCCCC
Confidence            99999999999999999999888999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccceeeeeccCCCcccccccccccccccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhh--hCCCCCcC
Q 013297          162 AAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKL--EGKQFSLS  239 (446)
Q Consensus       162 dGAvA~Ll~~~~~~~~~~~~~g~~~~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~--~~~~~~~~  239 (446)
                      +|||||||+|++++.|+++++++||+|+||||+|+..++||+|||++|++||+.+++.||..|+++....  ...+..++
T Consensus       169 AgAVAmLIgPnApi~ferglr~thM~hayDFyKPdl~SEyPvVDGklSi~cYl~Ald~cY~~~~kK~~~~~~~~~~~~l~  248 (462)
T KOG1393|consen  169 AGAVAMLIGPNAPIIFERGLRATHMQHAYDFYKPDLLSEYPVVDGKLSIQCYLSALDRCYTVYRKKIAAQWQKSGSDNLN  248 (462)
T ss_pred             cceEEEEEcCCCceEecccchhhhhhhhhhccCCCCCCcCceecCeehHHHHHHHHHHHHHHHHHHHHHHhccccCcccc
Confidence            9999999999999999999999999999999999999999999999999999999999999999998755  22345678


Q ss_pred             CCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcc
Q 013297          240 NADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTL  319 (446)
Q Consensus       240 did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~  319 (446)
                      +||+++||.|++||++|.+++|+|+||..+++...+..  .+  ...+..+++|.||++||++.+++++.|.+|++||+.
T Consensus       249 ~fdy~ifHsP~cKlvqKs~arl~ynDf~~~~~~~~~~~--~~--~~~~~l~~s~~dr~~ek~~~~~s~~~~~~Kt~~sl~  324 (462)
T KOG1393|consen  249 SFDYIIFHSPYCKLVQKSLARLLYNDFLLNPSQLPESA--GL--ESTLKLDESYTDRDLEKAFIKISKPIFKKKTKPSLL  324 (462)
T ss_pred             cCCeEEEeCchhhhHHHHHHHhhhhhhhhccccccccc--cc--cccccccccccchHHHHHHHHHhHHHHHhhccceeE
Confidence            99999999999999999999999999998776533221  11  147888999999999999999999999999999999


Q ss_pred             ccccccccccchHHHHHHHHHHhcC-CCCCCCEEEEEEeccccceeeEEEEEeCCCCCCChhhHhhhccHHHHhcccccc
Q 013297          320 IPKQVGNMYTASLYAALASLIHNKH-SELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEV  398 (446)
Q Consensus       320 ~~~~~GN~~saS~~l~L~~~l~~~~-~~~~G~~vll~syGsG~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~R~~~  398 (446)
                      +++++|||||+|+|.+|+++|.... ....|+||++||||||+++++|++++.++.++ ..+.+.+..++.+||++|+++
T Consensus       325 ~~~~~GNmYTaSly~~l~sll~~~~~d~l~Gkrig~FSYGSGlAAs~fs~~v~~da~p-~~k~~~~~~d~~~rL~~R~~~  403 (462)
T KOG1393|consen  325 APRRNGNMYTASLYASLASLLSAVPADELAGKRIGMFSYGSGLAASMFSLRVTQDATP-LDKIIASLTDLKKRLDSRKCV  403 (462)
T ss_pred             eeccCCccccHHHHHHHHHHHhccchhhhhccEEEEEeecCcchhheEEEEecCCCCc-hhhhhHhhhhHHHHhhhcccc
Confidence            9999999999999999999999742 23689999999999999999999999875444 223446678999999999999


Q ss_pred             c-HHHHHHHHhhhhcceeeeecccCCchhhhhh
Q 013297          399 I-LHFLQMCFVRYYVFFYIILTRLSGISHCIQS  430 (446)
Q Consensus       399 ~-~ey~~~~~~r~~~~~~~~~~~~~~~~~~~~~  430 (446)
                      + ++|++.|++||+.++.. ++-|+|+-.-+++
T Consensus       404 tPe~F~e~melre~~~~~~-n~~p~gs~~~Lf~  435 (462)
T KOG1393|consen  404 TPEEFTEIMELREDTHHKV-NFVPQGSIESLFP  435 (462)
T ss_pred             CHHHHHHHHHhhhhhcccc-cCCCCCchhhcCC
Confidence            9 99999999999999988 9999998655443

>PLN02577 hydroxymethylglutaryl-CoA synthase

Probab=100.00  E-value=2.1e-88  Score=696.16  Aligned_cols=424  Identities=81%  Similarity=1.236  Sum_probs=383.8

Q ss_pred             CCceeEEeEEEEecCCccccHHHHHHhcCCCcceeEEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEE
Q 013297            1 MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEV   80 (446)
Q Consensus         1 ~~~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~   80 (446)
                      ||++|||.+||+|+|+++|++++|++.+|.+++|+++||++|+|++++++||+++||++||+++|+++|+++++||+||+
T Consensus         1 ~~~~vgI~gig~Y~P~~~v~n~eLa~~~g~~~~~~~~GI~~r~~ava~~~Ed~~tmA~~AA~~aL~~agid~~~Idlliv   80 (459)
T PLN02577          1 MPKNVGILAMEVYFPPTCVQQEALEAHDGVSKGKYTIGLGQDCMAFCTDVEDVISMSLTVVKSLLEKYNIDPKQIGRLEV   80 (459)
T ss_pred             CCCccEEEEEEEeCCCeEEcHHHHHHHhCCCHHHHhhccceeEeccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCccCCCCCCccc
Q 013297           81 GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTG  160 (446)
Q Consensus        81 ~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~~~~~~~t~  160 (446)
                      +|+|+++.+|++|++|++.++++|++++++||+++||+||++||++|.+||++|.+|+++||||++|+++|..++.++|+
T Consensus        81 aTeT~~d~~ps~A~~v~~ll~~LG~~~~~afDi~~AC~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~a~~~~~~~e~t~  160 (459)
T PLN02577         81 GSETVIDKSKSIKTFLMQLFEESGNTDIEGVDSTNACYGGTAALLNCVNWVESSSWDGRYGLVVAADSAVYAEGPARPTG  160 (459)
T ss_pred             EcCCCCCCCCchHHHHHHHHHHhCCCCcEEeehhhhhHHHHHHHHHHHHHHHcCCCCCCeEEEEEechhhccCCCCCCCC
Confidence            99999999999999998777666678999999999999999999999999999987789999999999999877789999


Q ss_pred             cccceeeeeccCCCcccccccccccccccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCC
Q 013297          161 GAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSN  240 (446)
Q Consensus       161 GdGAvA~Ll~~~~~~~~~~~~~g~~~~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~d  240 (446)
                      ||||+||||++++++.++....++++.+++|||||++.++||.|||++|+.+|++++++++++++++.....+.+++++|
T Consensus       161 GdGA~A~lv~~~~~~~l~~~~~g~~~~~~~Df~rP~~~~~~~~vdG~~s~~~yl~~~~~~~~~~~~k~~~~~~~g~~~~d  240 (459)
T PLN02577        161 GAGAVAMLVGPNAPIVFESKYRGSHMAHVYDFYKPDLASEYPVVDGKLSQTCYLMALDSCYKRFCEKYEKLEGKQFSISD  240 (459)
T ss_pred             CcceEEEEEccCCCceeecccccccCcccchhcccCCCCCceEEcchHHHHHHHHHHHHHHHHHHHHhhcccccCCCHHH
Confidence            99999999999887777766788999999999999987789999999999999999999999999987544445788999


Q ss_pred             CceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccc
Q 013297          241 ADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLI  320 (446)
Q Consensus       241 id~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~  320 (446)
                      ||++||||||+||++|++++|+|+|+.++...+.+..++.++++..++.++.|.||++||++..++++.|.+||+||+.+
T Consensus       241 ~d~~vfHqP~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~  320 (459)
T PLN02577        241 ADYFVFHAPYNKLVQKSFARLVYNDFQRNASSVDEDAKEKLAPFAGLSSDESYQNRDLEKVSQQVAKPLYDAKVQPTTLI  320 (459)
T ss_pred             cCEEEecCCccchhHHHHHHHhhhhhhhccccccchhhhccccccccchhhccccchHHHHHHHhhHHHHHHhhccHhHH
Confidence            99999999999999999999999998865422122234556667788999999999999999999999999999999999


Q ss_pred             cccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEEeCCCCCCChhhHhhhccHHHHhccccccc-
Q 013297          321 PKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEVI-  399 (446)
Q Consensus       321 ~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~R~~~~-  399 (446)
                      ++++|||||||+|++|+++|++.....+|+||+|||||||+.+++|+++++++..+..+++++.+.++.++|++|++++ 
T Consensus       321 ~~~vGN~YTaSlyl~L~SlL~~~~~~~~G~rIg~fSYGSG~~se~fs~~v~~~~~~~~~~~~~~~~~~~~~L~~R~~ls~  400 (459)
T PLN02577        321 PKQVGNMYTASLYAALASLVHNKHSELAGKRILMFSYGSGLTATMFSLRLHEGQHPFSLSNIAKVMDVSEKLKSRHEVSP  400 (459)
T ss_pred             HHhcCcccchHHHHHHHHHHhhccccCCCCEEEEEeecCCccceeEEEEEeCCCccccHHHHHHhccHHHHHhCCccCCH
Confidence            9999999999999999999987433569999999999999999999999999544444688888999999999999999 


Q ss_pred             HHHHHHHHhhhhcceeeeecccCCch
Q 013297          400 LHFLQMCFVRYYVFFYIILTRLSGIS  425 (446)
Q Consensus       400 ~ey~~~~~~r~~~~~~~~~~~~~~~~  425 (446)
                      +||+++++.|+..+ ...++.|.+..
T Consensus       401 ~ey~~~~~~~~~~~-~~~~~~~~~~~  425 (459)
T PLN02577        401 EKFVETLKLMEHRY-GAKDFVPSKDV  425 (459)
T ss_pred             HHHHHHHHHHHhhc-cCcCCCcCCcc
Confidence            99999999999554 33478887764

>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade

Probab=100.00  E-value=7e-86  Score=676.67  Aligned_cols=420  Identities=60%  Similarity=0.959  Sum_probs=378.5

Q ss_pred             eeEEeEEEEecCCccccHHHHHHhcCCCcceeEEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEec
Q 013297            4 NVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSE   83 (446)
Q Consensus         4 ~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~   83 (446)
                      +|||.+|++|+|+++|++++|++.+|++++||++|+++|+|+|++++||+++||++|++++|+++++++++||+||++|+
T Consensus         1 ~vgI~~ig~y~P~~~v~~~eLa~~~g~~~~k~~~GI~~rr~av~~~~Ed~~tma~~AA~~lL~~a~id~~~Id~Liv~Te   80 (454)
T TIGR01833         1 DVGILALEIYFPSQYVDQAELEKYDGVSAGKYTIGLGQTKMGFCTDREDINSLCLTVVSKLMERYNIDYNQIGRLEVGTE   80 (454)
T ss_pred             CcEEEEEEEeCCCeEEcHHHHHHhcCCCHHHheechhheecccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECC
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCccCCCCCCcccccc
Q 013297           84 TVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAA  163 (446)
Q Consensus        84 t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~~~~~~~t~GdG  163 (446)
                      |+++.+|+++++|+++||++|+++|++||+++||+|+++||++|.+||+++.+|+++||||++|++.|.+++.++|+|||
T Consensus        81 S~~d~sps~a~~v~~lL~~lG~~~~~~fDi~~AC~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDia~y~~~~~~~t~GaG  160 (454)
T TIGR01833        81 TIIDKSKSVKTVLMQLFEESGNTDVEGIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDIAVYAKGNARPTGGAG  160 (454)
T ss_pred             CCCCCCCchHHHHHHHHHhcCCCCceEEeccccchhHHHHHHHHHHHHHcCCcCCCeEEEEEeccccccCCCeeeccccc
Confidence            99999999999999999877788999999999999999999999999999987889999999999999988889999999


Q ss_pred             ceeeeeccCCCcccccccccccccccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhh-----hCCCCCc
Q 013297          164 AVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKL-----EGKQFSL  238 (446)
Q Consensus       164 AvA~Ll~~~~~~~~~~~~~g~~~~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~-----~~~~~~~  238 (446)
                      |+||||++++++.++.+..++|+.+++|||||+..++||.|||++|+.||+++++++|..|.++....     .+.+..+
T Consensus       161 AvAmLv~~~~~~~~~~~~~~~~~~~~~DF~rP~~~~~~p~vdg~~S~~~Yl~a~~~~y~~y~~~~~~a~~~~~~~~~~~~  240 (454)
T TIGR01833       161 AVAMLIGPNAPIVFERGLRGSHMQHAYDFYKPDLASEYPVVDGKLSIQCYLSALDRCYKSYCKKIEKQWGKSGGDRKFTL  240 (454)
T ss_pred             eEEEEeccCccceecCccceEEEeecccccCCCCCCcccccCCccCHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCH
Confidence            99999999998778876688999999999999976779999999999999999999999998876432     1125778


Q ss_pred             CCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCc
Q 013297          239 SNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPST  318 (446)
Q Consensus       239 ~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~  318 (446)
                      +|||+++||+||+||++|++++++|+++...+..+.+..++++.++..++.+++|.||+++|.+.++++..|.+||+||+
T Consensus       241 ~dfd~~~fH~P~~km~~ka~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~  320 (454)
T TIGR01833       241 NDFDYMVFHSPYCKLVQKSLARLLYNDFLRNPSSIDTALYEGLEALSTLKLEDTYFDRDLEKAFMKASKELFDKKTKPSL  320 (454)
T ss_pred             hHcCEEeccCCcccHHHHHHHHHHHhhhhhccccccchhhcccchhhccccccccchhhHHHHHHhhhhhhHHHhhcchh
Confidence            99999999999999999999999999987655332223466677788999999999999999999999999999999999


Q ss_pred             cccccccccccchHHHHHHHHHHhcCC-CCCCCEEEEEEeccccceeeEEEEEeCCCCCC-C-hhhHhhhccHHHHhccc
Q 013297          319 LIPKQVGNMYTASLYAALASLIHNKHS-ELDGKRVVLFSYGSGLTATMFSLKLSEGHHPF-S-LSNILSVMNVAGKLKSR  395 (446)
Q Consensus       319 ~~~~~~GN~~saS~~l~L~~~l~~~~~-~~~G~~vll~syGsG~~~~~~~l~~~~~~~~~-~-~~~~~~~~~~~~~L~~R  395 (446)
                      .+++++|||||||+|++|+++|++... ...|+||+|||||||+.+++|+++++++..++ . ++.+..+.++.++|++|
T Consensus       321 ~~~~~vGN~YtaSlyl~L~Sll~~~~~~~~~g~ri~~fSYGSG~~se~fs~~v~~~~~~~~~~~~~~~~~~~~~~~L~~R  400 (454)
T TIGR01833       321 LVPNQVGNMYTASLYGCLASLLSSKSAQELAGKRVGMFSYGSGLAASMFSLRVSQDASPGSALDKLIASLSDLKNKLDSR  400 (454)
T ss_pred             HHHHhcCchhhhHHHHHHHHHHhhCCccccCCCEEEEEeccCCcceeeEEEEEeCCccccchHHHHHHHHhhHHHHHhcC
Confidence            999999999999999999999987432 56899999999999999999999999932211 1 44555567999999999


Q ss_pred             cccc-HHHHHHHHhhhhcceeeeecccCCc
Q 013297          396 HEVI-LHFLQMCFVRYYVFFYIILTRLSGI  424 (446)
Q Consensus       396 ~~~~-~ey~~~~~~r~~~~~~~~~~~~~~~  424 (446)
                      ++++ +||+++++.|++ .+....+.|.|.
T Consensus       401 ~~~s~~ey~~~~~~~~~-~~~~~~~~~~~~  429 (454)
T TIGR01833       401 HCVAPEEFEETMELREQ-AHHKKNFTPQGS  429 (454)
T ss_pred             ccCCHHHHHHHHHhhhh-hccccccccccc
Confidence            9999 999999999998 444457777665

Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.

>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]

Probab=100.00  E-value=4.8e-76  Score=578.76  Aligned_cols=350  Identities=33%  Similarity=0.522  Sum_probs=331.8

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhcCCCcceeEEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEe
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGS   82 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T   82 (446)
                      |+|||.++++|+|.++|++++|++.+|.+++|++.|+++..|+|++.+||++|||++||+++|+++++||.+|++|+|+|
T Consensus         1 ~~iGI~~~g~y~p~~~i~~~ela~~~g~d~~k~~~gl~~~e~sv~~~~ED~vTmaveAA~~~l~r~~~D~~~Ig~v~vgT   80 (377)
T COG3425           1 MMIGIVGIGAYIPRYRIKLEELARAWGVDPEKIKKGLGVEEKSVPPWDEDAVTMAVEAARNALKRADIDPSKIGAVIVGS   80 (377)
T ss_pred             CccccceEEEeccceEeeHHHHHhhcCCChHHhhhccccccccCCCCchhHHHHHHHHHHHHHhccCCCHHHCceEEEec
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCccCCC-CCCcccc
Q 013297           83 ETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEG-PARPTGG  161 (446)
Q Consensus        83 ~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~~~-~~~~t~G  161 (446)
                      ||++|.+|++|++|++.||+  +++++++|+++||++|++||++|.+||.+|.+  +++|||++|++.|.++ ..|+|+|
T Consensus        81 ES~~d~~K~~at~v~~~lg~--~~~~~~~d~~~AC~agT~aL~~a~~~v~s~~~--~~~LvI~sD~a~~~~~~~~E~t~G  156 (377)
T COG3425          81 ESGPDAVKPTATIVAEALGL--NPSARAADVEFACYAGTAALQAAIGWVESGMI--SYGLVIGADTAQYAPGDALEYTAG  156 (377)
T ss_pred             CCCcccccchHHHHHHHhCC--CCceehhhHHHHHHHHHHHHHHHHHHHHcCCc--cceEEEeehhhccCCCcccCccCC
Confidence            99999999999999999999  89999999999999999999999999999977  8999999999999887 5799999


Q ss_pred             ccceeeeeccCCCcccccccccccccccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCC
Q 013297          162 AAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNA  241 (446)
Q Consensus       162 dGAvA~Ll~~~~~~~~~~~~~g~~~~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~di  241 (446)
                      +|||||||++|+++..+....++|+.+++|||||.+. .||.++|++|..+|+++++.+++.|+++.      +++++||
T Consensus       157 AGavA~lIg~n~~~~a~~~~~~syt~d~~DFwRp~~~-~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~------gls~~df  229 (377)
T COG3425         157 AGAVAFLIGKNPPIVAEFEGTGSYTTDTPDFWRPDGQ-PYPYVDGRFSEPAYFKHVENAAKGYMEKT------GLSPDDF  229 (377)
T ss_pred             CceEEEEEccCCCeEEEecCceEEecCCCcccccCCC-cccccCceecHHHHHHHHHHHHHHHHHHh------CCChhhh
Confidence            9999999999987766667889999999999999955 89999999999999999999999999998      7899999


Q ss_pred             ceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcccc
Q 013297          242 DYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIP  321 (446)
Q Consensus       242 d~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~  321 (446)
                      |++|||+||+||.+|+++.++                        .+                      .++|+|++.++
T Consensus       230 dy~vfH~P~~k~~~ka~k~l~------------------------~~----------------------~e~v~~~l~~~  263 (377)
T COG3425         230 DYIVFHQPNGKFPKKAAKSLG------------------------FK----------------------EEQVKPGLVYP  263 (377)
T ss_pred             CeEEecCCCCchHHHHHHHhC------------------------cc----------------------HhhcCccchhh
Confidence            999999999999999999883                        22                      26789999999


Q ss_pred             ccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEEeCCCCCCChhhHhhhccHHHHhccccccc-H
Q 013297          322 KQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEVI-L  400 (446)
Q Consensus       322 ~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~R~~~~-~  400 (446)
                      +++||+||||++++|+++|+++ . ++||||+++|||||+.+++|++++++     .+++++++..+..+|.+|+++| .
T Consensus       264 ~~vGN~YtgS~~L~Las~L~~a-~-~~G~rIl~~SYGSGa~s~~fs~~v~~-----~~~~~~~~~~~~~~l~~R~~ls~~  336 (377)
T COG3425         264 QRIGNTYTGSLLLGLASLLDNA-K-LPGDRILLFSYGSGAGSEAFSITVTD-----GIEERRKKLAPTVLLEQRNRLSYI  336 (377)
T ss_pred             hhcCcccchhHHHHHHHHHhhc-C-CCCCEEEEEeeCCCcceeEEEEEecc-----cHHHHhhhcchHHHHHhhccCCHH
Confidence            9999999999999999999995 3 79999999999999999999999999     8999998999999999999999 9


Q ss_pred             HHHHHHHhhhhcceee
Q 013297          401 HFLQMCFVRYYVFFYI  416 (446)
Q Consensus       401 ey~~~~~~r~~~~~~~  416 (446)
                      +|+.+++.|...-..-
T Consensus       337 dYe~~~~~~~~~~~~~  352 (377)
T COG3425         337 DYELYFKRRKKIRLGK  352 (377)
T ss_pred             HHHHHHhhhccccccc
Confidence            9999999998887554

>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade

Probab=100.00  E-value=1.2e-65  Score=523.54  Aligned_cols=352  Identities=30%  Similarity=0.446  Sum_probs=313.3

Q ss_pred             eEEeEEEEecCCccccHHHHHHhcCCCcceeEEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEecc
Q 013297            5 VGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSET   84 (446)
Q Consensus         5 vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t   84 (446)
                      |||.+|++|+|+++|++++|++.+|++++|+..|+|++++++++++||+++||++|++++|+++  ++++||+|+++|+|
T Consensus         1 iGI~~i~~y~P~~~v~~~ela~~~g~~~~~~~~g~G~~~~~~~~~~ed~~~la~~Aa~~aL~~a--~~~~Id~li~~t~s   78 (379)
T TIGR01835         1 IGIDKISFFTPQNYLDMTALAEARGVDPEKFHIGIGQKKMAVPPIDEDIVTMAASAAKPILDRN--DKQKIDMVIFGTES   78 (379)
T ss_pred             CCEeEEEEECCCEEeeHHHHHHHhCCCHHHHHhhcCceEEeeCCCCCCHHHHHHHHHHHHHHhC--CHhhCCEEEEEeCC
Confidence            6999999999999999999999999999999889999999999999999999999999999998  89999999999999


Q ss_pred             CCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCccCCC-CCCcccccc
Q 013297           85 VIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEG-PARPTGGAA  163 (446)
Q Consensus        85 ~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~~~-~~~~t~GdG  163 (446)
                      +++..|+++.+|+++||+  .++++++|+++||+|++.||++|.+||++|.+  ++||||++|+++|... +.++|||||
T Consensus        79 ~~~~~~s~a~~v~~~Lgl--~~~~~~~dv~~aC~gg~~aL~~A~~~i~s~~~--~~aLVv~~D~a~~~~~~~~~~~~GdG  154 (379)
T TIGR01835        79 GIDQSKAAAVYVHGLLGL--QPFCRSFELKQACYGATAALQMAKGHVALSPD--RKVLVIASDIAKYGLESPGEPTQGAG  154 (379)
T ss_pred             CCCCCCCHHHHHHHHhCC--CCCceEEEeccccHHHHHHHHHHHHHHHcCCC--CeEEEEEeehhhcccCCCCCccccCc
Confidence            999999999999999998  66899999999999999999999999999955  9999999999988653 468999999


Q ss_pred             ceeeeeccCCCc-ccccccccccccccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCCc
Q 013297          164 AVVMLVGPDAPV-AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNAD  242 (446)
Q Consensus       164 AvA~Ll~~~~~~-~~~~~~~g~~~~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~did  242 (446)
                      |+||||++++.+ .++. ..+.++.+.+|||+|.+ ..+|.++|++++.+|++.+++++++++++.      +++++|||
T Consensus       155 A~A~Ll~~~~~i~~~~~-~~~~~t~~~~df~~p~~-~~~~~v~g~~s~~~y~~~~~~~~~~~l~~~------g~~~~did  226 (379)
T TIGR01835       155 AVAMLVSADPKLLAINE-DSVLYTDDIMDFWRPNY-STTALVDGQYSNEQYLNAFENAWNDYAKRT------GLSLADFA  226 (379)
T ss_pred             cEEEEEecCCCeeEEec-cceeeecCCCCccCCCC-CCceeECcHHHHHHHHHHHHHHHHHHHHHh------CCCHHHcC
Confidence            999999999764 3332 23467778899999984 667999999999999999999999999987      78999999


Q ss_pred             eeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccccc
Q 013297          243 YFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPK  322 (446)
Q Consensus       243 ~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~  322 (446)
                      +++|||||.+|+.+++++++ +++                   +++.                 .+.+.+.+++|+.+.+
T Consensus       227 ~~i~H~p~~~~~~k~~~~~l-~~~-------------------~~~~-----------------~~~~~~~~~~s~~~~~  269 (379)
T TIGR01835       227 AFCFHVPFTKMGLKALRHIL-KKN-------------------YEDE-----------------DESVQNAYLESIIYNR  269 (379)
T ss_pred             EEEECCCCCcHHHHHHHHHH-hhc-------------------cccc-----------------HHHHHHHhhhhhhhhh
Confidence            99999999999999888773 110                   2221                 1223344567788889


Q ss_pred             cccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEEeCCCCCCChhhHhhhccHHHHhccccccc-HH
Q 013297          323 QVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEVI-LH  401 (446)
Q Consensus       323 ~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~R~~~~-~e  401 (446)
                      ++||+||||+|++|++++++.+++++||+|+|+|||||+++++|++++++     ++++...+.++.++|++|++++ ++
T Consensus       270 ~~GN~~sas~~l~L~~~l~~~~~~~~Gd~ill~s~GsG~~ae~~~~~~~~-----~~~~~~~~~~~~~~l~~r~~~~~~~  344 (379)
T TIGR01835       270 EVGNLYTGSLYLGLASLLENAFEDTTGDKIGLFSYGSGAVAEFFSGTLVA-----GYRDHLKKERHLALLKNRTNLSYAE  344 (379)
T ss_pred             hcCchHhHHHHHHHHHHHHhcccCCCCCEEEEEEecCCcceeeEEEEEcc-----cHHHHHhcccHHHHHhCCccCCHHH
Confidence            99999999999999999998325789999999999999999999999998     7999888889999999999999 99


Q ss_pred             HHHHHHhhhhc
Q 013297          402 FLQMCFVRYYV  412 (446)
Q Consensus       402 y~~~~~~r~~~  412 (446)
                      |+++++.|...
T Consensus       345 y~~~~~~~~~~  355 (379)
T TIGR01835       345 YEALFEETLPT  355 (379)
T ss_pred             HHHHHHhccCC
Confidence            99999998763

This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.

>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]

Probab=100.00  E-value=7.9e-53  Score=413.54  Aligned_cols=306  Identities=21%  Similarity=0.231  Sum_probs=263.0

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhcCCCccee--EEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEE
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEV   80 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~   80 (446)
                      ++++|.++|.|+|++.++|+++++..+.+.+|+  .+|+.+||.+  .++|...+|+++||++||+++|++|+|||+||+
T Consensus         2 ~~a~i~g~G~~lP~~~vtn~d~e~~~~tsdewI~~rtGir~R~~a--~~~e~~s~la~~Aa~~AL~~Agi~~~dIDlII~   79 (323)
T COG0332           2 MNAKILGIGSYLPERVVTNADLEKRVDTSDEWIETRTGIRERRIA--ADDETTSDLAVEAARKALEDAGISPDDIDLIIV   79 (323)
T ss_pred             CcceEEEEEeecCCcccChHHHHhccCCCcceeeeecCCceeeec--CCCccHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence            578999999999999999999999999999998  4788888855  789999999999999999999999999999999


Q ss_pred             EeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecC-ccCCCCCC--
Q 013297           81 GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-VYAEGPAR--  157 (446)
Q Consensus        81 ~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~-~y~~~~~~--  157 (446)
                      +|.||++..|++|+.||+.||+   .++.+||++.+|+|+++||.+|..+|++|.+  |+||||++|++ ++.++.+|  
T Consensus        80 aT~tpd~~~Ps~A~~vq~~LG~---~~~~afDl~aaCsgf~yaL~~A~~~i~sG~~--k~vLVVg~e~~S~~ld~~dR~t  154 (323)
T COG0332          80 ATSTPDHLFPSTACLVQARLGL---GGAPAFDLQAACSGFLYALSVADGLIRSGGY--KNVLVVGAETLSRILDWTDRDT  154 (323)
T ss_pred             EcCCcccCCChHHHHHHHHhCC---CCcceeechhhhHHHHHHHHHHHHHHHcCCC--CEEEEEehhHhhccCCHhhccc
Confidence            9999999999999999999997   5699999999999999999999999999987  99999999999 45555444  


Q ss_pred             -ccccccceeeeeccCC-CcccccccccccccccccccccCCC---------CCCcccCChhHHHHHHHHHHHHHHHHHH
Q 013297          158 -PTGGAAAVVMLVGPDA-PVAFESKLRGSHMSHAYDFYKPNLA---------SEYPVVDGKLSQTCYLMALDTCYKCLCS  226 (446)
Q Consensus       158 -~t~GdGAvA~Ll~~~~-~~~~~~~~~g~~~~~~~df~~p~~~---------~~~p~~dG~~s~~~yl~~l~~~~~~~~~  226 (446)
                       .+|||||+|+||++.+ ...+.....++.+....-.+.|...         ..+..++|+..++.-.+.+++++++.++
T Consensus       155 ~vlFgDGAgAvvl~~~~~~~~i~~~~l~sdg~~~~~l~~~~~~~~~~~~~~~~~~~~m~Gr~vfk~av~~~~~~~~~~L~  234 (323)
T COG0332         155 CVLFGDGAGAVVLEATEDDNGILDTDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVMDGREVFKFAVRAMPKAIEEVLE  234 (323)
T ss_pred             eEEEcCCceEEEEecCCCCcCeeeeeeeccccCCCeeeccCCCCccccccccccceeeccHHHHHHHHHHHHHHHHHHHH
Confidence             6799999999999996 3222111122222211112222211         1234689999998888999999999998


Q ss_pred             HhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhh
Q 013297          227 KYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLA  306 (446)
Q Consensus       227 ~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~  306 (446)
                      +.      +++.+|||||++||+|.+|.+.+.++|                        ++|.+         |++.++ 
T Consensus       235 ~~------~l~~~dId~~vpHQan~ri~~~i~~~l------------------------~~~~~---------k~~~~~-  274 (323)
T COG0332         235 KA------GLTPEDIDWFVPHQANLRIIEAIAKKL------------------------GIPEE---------KVVVTV-  274 (323)
T ss_pred             Hc------CCCHHHCCEEccccccHHHHHHHHHHc------------------------CCCHH---------HHhhHH-
Confidence            86      899999999999999999999999998                        77654         555677 


Q ss_pred             hhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEEe
Q 013297          307 KPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLS  371 (446)
Q Consensus       307 ~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~~  371 (446)
                                     .+|||+++||+|++|+.++++ +++++||+|+|.+||+|++|++++++|.
T Consensus       275 ---------------~~yGNtsaAsiplaL~~~~~~-g~ik~Gd~ill~~fG~Gltwg~~~~r~~  323 (323)
T COG0332         275 ---------------DKYGNTSAASIPLALDEALRE-GRIKPGDLVLLEAFGGGLTWGAALVRWG  323 (323)
T ss_pred             ---------------HHhcccccchHHHHHHHHhhh-CCCCCCCEEEEEeecCcceeeeEEEEeC
Confidence                           899999999999999999999 8999999999999999999999999984

>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative

Probab=100.00  E-value=2.8e-51  Score=413.26  Aligned_cols=334  Identities=26%  Similarity=0.398  Sum_probs=272.6

Q ss_pred             eeEEeEEEEecCCccccHHHHHHhcCCCcceeEEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEec
Q 013297            4 NVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSE   83 (446)
Q Consensus         4 ~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~   83 (446)
                      +++|.+++.|+|+++++++++++..+.+++++..++|.+++++.+++|+..+|+++|++++|+++|+++++||.|+++|+
T Consensus         1 ~~~I~g~g~~lP~~~v~n~~l~~~~~~~~~~i~~~~Gi~~r~v~~~~~~~~~la~~Aa~~aL~~agl~~~dID~li~~s~   80 (345)
T TIGR00748         1 MAGIVGYGAYIPMYRIKVEEIARVWGKDPESISNGLPVEEKAVPGLDEDTATIGVEAARNALKRAKIDPKDIGAVYVGSE   80 (345)
T ss_pred             CccEEEEEEeCCCeeecHHHHHHHhCCCHhHeeeccceeeeecCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEec
Confidence            47999999999999999999999999999998544444445577899999999999999999999999999999999999


Q ss_pred             cCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCccCCC-CCCccccc
Q 013297           84 TVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEG-PARPTGGA  162 (446)
Q Consensus        84 t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~~~-~~~~t~Gd  162 (446)
                      ++++..|+.+..|++.||+  .+++.++|++++|+|++.||++|..+|++|..  +++|||++|..+..+. ....++||
T Consensus        81 ~~~~~~p~~a~~v~~~LGl--~~~~~~~dv~~aC~g~~~al~~A~~~i~sg~~--~~vLVv~~d~~~~~~~~~~~~~~GD  156 (345)
T TIGR00748        81 SHPYAVKPTATIVAEAIGA--TPDLTAADLEFACKAGTAGIQACMGLVASGMI--KYGLAIGADTAQGAPGDALEYTAGA  156 (345)
T ss_pred             CCCccccchHHHHHHHcCC--CCCceEEEHHHhHHHHHHHHHHHHHHHHcCCC--CEEEEEEEeecccCCCccCcccCCC
Confidence            9998889999999999998  55788999999999999999999999999976  9999999999865432 23577999


Q ss_pred             cceeeeeccCCCc-ccccccccccccccccccccCCCCCCcccCChhHH-HHHHHHHHHHHHHHHHHhhhhhCCCCCcCC
Q 013297          163 AAVVMLVGPDAPV-AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQ-TCYLMALDTCYKCLCSKYEKLEGKQFSLSN  240 (446)
Q Consensus       163 GAvA~Ll~~~~~~-~~~~~~~g~~~~~~~df~~p~~~~~~p~~dG~~s~-~~yl~~l~~~~~~~~~~~~~~~~~~~~~~d  240 (446)
                      ||+|+||++.+.. .+..  ...+..+..|+|++. +..+|...+++.. ..+.+...+++++++++.      +++++|
T Consensus       157 GAaA~vl~~~~~~~~~~~--~~~~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~------gl~~~d  227 (345)
T TIGR00748       157 GGAAYIIGEKNTVAYFEG--TYSYTTDTPDFWRRE-GEPYPRHGGRFTGEPAYFHHVVTAAKGLMEKL------GLTPED  227 (345)
T ss_pred             ceEEEEEccCCcceEeec--ccceecccccccccC-CCcCCCcCCeecChHHHHHHHHHHHHHHHHHc------CCCHHH
Confidence            9999999987642 2211  112233345677764 2333433333322 235555556777777775      899999


Q ss_pred             CceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccc
Q 013297          241 ADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLI  320 (446)
Q Consensus       241 id~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~  320 (446)
                      ||+|++||||.+|++.+.++|                        |++.+++..         +             + .
T Consensus       228 id~~i~Hq~~~~~~~~~~~~l------------------------gl~~ek~~~---------~-------------~-~  260 (345)
T TIGR00748       228 FDYAVFHQPNGKFYLVAARML------------------------GFPKEQVKP---------G-------------L-L  260 (345)
T ss_pred             cCEEEeCCCChHHHHHHHHHc------------------------CCCHHHeec---------c-------------c-c
Confidence            999999999999999998888                        888765432         1             1 1


Q ss_pred             cccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEEeCCCCCCChhhHhh-hccHHHHhccccccc
Q 013297          321 PKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSNILS-VMNVAGKLKSRHEVI  399 (446)
Q Consensus       321 ~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~L~~R~~~~  399 (446)
                      .+++||+++||+|++|.++++.   +++||+|+|++||+|++|++++++|++     .++..++ +-++.+.|++|+.++
T Consensus       261 ~~~~GNt~sAsipl~L~~~~~~---~~~Gd~vll~~~G~G~s~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~  332 (345)
T TIGR00748       261 TPRIGNTYSGATPVGLSAVLDI---AEPGDRILAVSYGSGAGSDAFSIVVQD-----AIEEKRDLAPKVADYIKRKKYID  332 (345)
T ss_pred             ccccCchhhhHHHHHHHHHHHh---cCCCCEEEEEEecCCcceeEEEEEEch-----hHHHHhhhhhhHHHHHhcCccCC
Confidence            2799999999999999999863   679999999999999999999999998     7887763 338999999999999


Q ss_pred             -HHHHHH
Q 013297          400 -LHFLQM  405 (446)
Q Consensus       400 -~ey~~~  405 (446)
                       ++|+++
T Consensus       333 ~~~y~~~  339 (345)
T TIGR00748       333 YALYAKF  339 (345)
T ss_pred             HHHHHHH
Confidence             999965

Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.

>PRK04262 hypothetical protein; Provisional

Probab=100.00  E-value=4.1e-51  Score=412.72  Aligned_cols=333  Identities=24%  Similarity=0.385  Sum_probs=274.5

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhcCCCcceeE--EeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEE
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYT--IGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEV   80 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~--~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~   80 (446)
                      |+|+|.+++.|+|+++|+++++++..+.+++|+.  +|+.+|+  +++++++..+|+++|++++|+++|+++++||.||+
T Consensus         1 ~~v~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~Gi~~R~--~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~   78 (347)
T PRK04262          1 MMVGIVGYGAYIPRYRIKVEEIARVWGDDPEAIKRGLGVEEKS--VPGPDEDTATIAVEAARNALKRAGIDPKEIGAVYV   78 (347)
T ss_pred             CceeEEEEEEeCCCEEecHHHHHHHhCcCHHHHhhccCeeeee--cCCCCcCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence            6799999999999999999999999999988874  5666665  66899999999999999999999999999999999


Q ss_pred             EeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCccCCC-CCCcc
Q 013297           81 GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEG-PARPT  159 (446)
Q Consensus        81 ~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~~~-~~~~t  159 (446)
                      +|+++++..|+.+.+|++.||+  .+++.++|++++|+|++.||..|..+|++|..  ++||||++|...+... ..+.+
T Consensus        79 ~s~~~~~~~p~~a~~v~~~Lgl--~~~~~~~dv~~~C~~~~~aL~~A~~~i~sg~~--~~aLVv~~e~~~~~~~~~~~~~  154 (347)
T PRK04262         79 GSESHPYAVKPTATIVAEALGA--TPDLTAADLEFACKAGTAALQAAMGLVKSGMI--KYALAIGADTAQGAPGDALEYT  154 (347)
T ss_pred             EecCCCcccccHHHHHHHHcCC--CCCceEEEHHHhHHHHHHHHHHHHHHHHcCCC--CEEEEEEEeeeccCCCCCCCCc
Confidence            9999998889999999999998  45688999999999999999999999999955  9999999999644332 23467


Q ss_pred             ccccceeeeeccCCCc-ccccccccccccccccccccCCCCCCcccCChhHH-HHHHHHHHHHHHHHHHHhhhhhCCCCC
Q 013297          160 GGAAAVVMLVGPDAPV-AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQ-TCYLMALDTCYKCLCSKYEKLEGKQFS  237 (446)
Q Consensus       160 ~GdGAvA~Ll~~~~~~-~~~~~~~g~~~~~~~df~~p~~~~~~p~~dG~~s~-~~yl~~l~~~~~~~~~~~~~~~~~~~~  237 (446)
                      +||||+|+||++++.. .+..  ..++..+..|+|++.+ ..+|.....++. ..|++.++++++.++++.      +++
T Consensus       155 ~GDGA~A~ll~~~~~~~~i~~--~~~~~~d~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~------gl~  225 (347)
T PRK04262        155 AAAGGAAFIIGKEEVIAEIEA--TYSYTTDTPDFWRREG-EPYPRHGGRFTGEPAYFKHIISAAKGLMEKL------GLK  225 (347)
T ss_pred             CCCCcEEEEEecCcccceeec--cccccccchhhcCCCC-CcCCCcCceecchHHHHHHHHHHHHHHHHHh------CcC
Confidence            8999999999986542 2211  1123345567787542 223332223222 256778888999998887      799


Q ss_pred             cCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCC
Q 013297          238 LSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPS  317 (446)
Q Consensus       238 ~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s  317 (446)
                      ++|||+|++||+|.+|++.+.++|                        ++|.++.+.                      +
T Consensus       226 ~~dId~~v~Hq~n~~~~~~~~~~L------------------------gl~~ek~~~----------------------~  259 (347)
T PRK04262        226 PSDYDYAVFHQPNGKFPLRVAKML------------------------GFTKEQVKP----------------------G  259 (347)
T ss_pred             HHHhceeecCCCchHHHHHHHHHc------------------------CCCHHHhhc----------------------c
Confidence            999999999999999999999888                        888765432                      1


Q ss_pred             ccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEEeCCCCCCChhhHh-hhccHHHHhcccc
Q 013297          318 TLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSNIL-SVMNVAGKLKSRH  396 (446)
Q Consensus       318 ~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~L~~R~  396 (446)
                      . +.+++|||+|||+|++|.++++.   +++||+|+|++||+|+++++++++|++     .+++.+ ...++.+.|++|+
T Consensus       260 ~-~~~~~GNt~sAsi~~~L~~~~~~---~~~Gd~vll~~~G~G~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~  330 (347)
T PRK04262        260 L-LTPYIGNTYSGSALLGLAAVLDV---AKPGDRILVVSFGSGAGSDAFSITVTD-----AIEEKRDLAPTVEDYLERKK  330 (347)
T ss_pred             c-hhhhhCChHHHHHHHHHHHHHHh---CCCCCEEEEEecCCCcceeeEEEEech-----hHHHhhhccccHHHHHhCCc
Confidence            1 12899999999999999999874   579999999999999999999999988     677664 3348999999999


Q ss_pred             ccc-HHHHHH
Q 013297          397 EVI-LHFLQM  405 (446)
Q Consensus       397 ~~~-~ey~~~  405 (446)
                      .++ ++|+++
T Consensus       331 ~~~~~~y~~~  340 (347)
T PRK04262        331 YIDYAVYAKY  340 (347)
T ss_pred             cCCHHHHHHH
Confidence            999 999954

>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase

Probab=100.00  E-value=1.7e-50  Score=390.63  Aligned_cols=248  Identities=48%  Similarity=0.754  Sum_probs=201.6

Q ss_pred             cccccccccccccccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhh---hCCCCCcCCCceeeccCcch
Q 013297          175 VAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKL---EGKQFSLSNADYFVFHSPYN  251 (446)
Q Consensus       175 ~~~~~~~~g~~~~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~---~~~~~~~~did~~i~H~p~~  251 (446)
                      ++|++++.|+||.|+||||||+..++||+|||++|++||+++++.||+.|+++..+.   ...+..++++|+++||.||+
T Consensus         1 iv~d~~~~~~~m~~~yDFyKP~~~seyP~VDG~~S~~~Yl~ald~~y~~y~~k~~~~~~~~~~~~~l~~~d~~~fH~Py~   80 (282)
T PF08540_consen    1 IVFDRGLRGSHMEHVYDFYKPDLSSEYPVVDGKLSIQCYLDALDKCYKRYKEKVEKLANRGNKGTSLDDFDYVCFHSPYC   80 (282)
T ss_dssp             EEEETTEEEEEE----SEE-BTTT-SS-EE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSST--GGG-SEEEE--SSH
T ss_pred             CcccCCCceeehhhchhccCCCCCCCCcEEchHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCccccceEEEecCch
Confidence            357888999999999999999989999999999999999999999999999997543   14468899999999999999


Q ss_pred             HHHHHHHHHhhhhhccccccchh-hHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccccccccccccc
Q 013297          252 KLVQKSFARLLFNDFMRNASSVD-EAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTA  330 (446)
Q Consensus       252 ~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~sa  330 (446)
                      ||++|++.+|+++|+..++.... ....+.+.++.+++.+++|.||++||++.+.+++.|++||+||+.+++++||||||
T Consensus        81 klv~Ka~~rl~~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~dr~lek~~~~~s~~~~~~kv~psl~~~~~vGN~YTa  160 (282)
T PF08540_consen   81 KLVQKAFARLLYNDFLRNPSSEEFEEIDAELAPFRDLPLEESYFDRDLEKAFMKASKEDFERKVEPSLLYSRQVGNMYTA  160 (282)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCHHHHHHHCCHGGGTT--GGGHCTHHHHHHHHHHHHHHHHHHHCHHHTHHHHHHB--GGG
T ss_pred             HHHHHHHHHHHHhhhhhccccccccccchhhhhhccCCcccccccHHHHHHHHHHHHHHHHHHHhHHHHHHHHcCceehH
Confidence            99999999999999987776532 23345566677899999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHH-hcCCCCCCCEEEEEEeccccceeeEEEEEeCCCCCCChhh-------HhhhccHHHHhccccccc-HH
Q 013297          331 SLYAALASLIH-NKHSELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSN-------ILSVMNVAGKLKSRHEVI-LH  401 (446)
Q Consensus       331 S~~l~L~~~l~-~~~~~~~G~~vll~syGsG~~~~~~~l~~~~~~~~~~~~~-------~~~~~~~~~~L~~R~~~~-~e  401 (446)
                      |+|++|+++|. .......|+||+|||||||+++++|++++++     ++++       +.+.+++.+||++|++++ +|
T Consensus       161 Sly~~L~SlL~~~~~~~l~GkrI~~FSYGSG~~s~~fs~~v~~-----~~~~~~~~~~~i~~~~dl~~rL~~R~~~s~ee  235 (282)
T PF08540_consen  161 SLYLGLASLLSSAEADDLAGKRIGMFSYGSGLASEFFSGRVQP-----GAEEGSLLNRLIAKALDLKERLDARTKLSPEE  235 (282)
T ss_dssp             HHHHHHHHHHHHHHSCHHTT-EEEEEEEETTTEEEEEEEEE-T-----TGGGTSHHHHHHHHHHCHHHHHHTSEEE-HHH
T ss_pred             HHHHHHHHHhhccCccccCCCEEEEEEecCCcceeEEEEEEeC-----CccccchhhhHHHhhhhHHHHHhcCcCCCHHH
Confidence            99999999993 2234468999999999999999999999999     5555       777889999999999999 99


Q ss_pred             HHHHHHhhhhcceeeeecccCCchhhh
Q 013297          402 FLQMCFVRYYVFFYIILTRLSGISHCI  428 (446)
Q Consensus       402 y~~~~~~r~~~~~~~~~~~~~~~~~~~  428 (446)
                      |+++++.|++.+... ||.|+|.-+.+
T Consensus       236 ye~~~~~re~~~~~~-~y~p~~~~~~l  261 (282)
T PF08540_consen  236 YEEILKLREKTYGAK-DYTPSGDISSL  261 (282)
T ss_dssp             HHHHHHHHHHHTTHT-SBETTSTGGGS
T ss_pred             HHHHHHhhhhhcccc-CCCCCCccccc
Confidence            999999999999976 99999986544

Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the C-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1TXT_D 1TVZ_A 1X9E_B 2HDB_B 3V4X_A 3V4N_C 2P8U_A 2FA0_A 2F9A_A 2F82_A ....

>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=5.6e-48  Score=386.69  Aligned_cols=302  Identities=17%  Similarity=0.182  Sum_probs=248.3

Q ss_pred             eeEEeEEEEecCCccccHHHHHHhcCCCcceeE--EeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEE
Q 013297            4 NVGILAMDIYFPPTCVQQEALEAHDGASKGKYT--IGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVG   81 (446)
Q Consensus         4 ~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~--~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~   81 (446)
                      +++|.+++.|+|+++|+++++++..|.+++++.  +|+.+|+  +++++|++.+||++||+++|+++|+++++||+||++
T Consensus         3 ~~~I~~~g~~lP~~~v~~~~~~~~~~~~~~~i~~~~Gi~~r~--~~~~~e~~~~la~~Aa~~aL~~ag~~~~~Id~li~~   80 (326)
T PRK05963          3 SSRIAGFGHAVPDRRVENAEIEAQLGLETGWIERRTGIRCRR--WAAPDETLSDLAASAGDMALSDAGIERSDIALTLLA   80 (326)
T ss_pred             ccEEEEEEEECCCCeecHHHHHHHcCCCHHHhhhccCCeEEE--EcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence            589999999999999999999999998888874  5666655  568899999999999999999999999999999999


Q ss_pred             eccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCccC-CC---CCC
Q 013297           82 SETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYA-EG---PAR  157 (446)
Q Consensus        82 T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~-~~---~~~  157 (446)
                      |+++++..|+.+.+|+++||+   +++.+||++++|+|+++||++|.++++++ .  ++||||++|..+.. +.   ...
T Consensus        81 t~~~d~~~p~~a~~v~~~Lg~---~~~~~~di~~~C~g~~~aL~~A~~~l~~~-~--~~aLVv~~d~~s~~~~~~~~~~~  154 (326)
T PRK05963         81 TSTPDHLLPPSAPLLAHRLGL---QNSGAIDLAGACAGFLYALVLADGFVRAQ-G--KPVLVVAANILSRRINMAERASA  154 (326)
T ss_pred             CCCCCCCCCcHHHHHHHHhCC---CCCceeeccchhhHHHHHHHHHHHHHHcC-C--CeEEEEEechhhccCCccccCce
Confidence            999998999999999999997   56889999999999999999999999987 3  89999999987432 21   224


Q ss_pred             ccccccceeeeeccCCCc--cccccccccccccccccc-ccCCCCC-------------CcccCChhHHHHHHHHHHHHH
Q 013297          158 PTGGAAAVVMLVGPDAPV--AFESKLRGSHMSHAYDFY-KPNLASE-------------YPVVDGKLSQTCYLMALDTCY  221 (446)
Q Consensus       158 ~t~GdGAvA~Ll~~~~~~--~~~~~~~g~~~~~~~df~-~p~~~~~-------------~p~~dG~~s~~~yl~~l~~~~  221 (446)
                      .+|||||+|+||++++.-  .+......++. +.+|++ .|.++..             +...+|+..+..+.+.+++++
T Consensus       155 ~lfGDgA~A~ll~~~~~~~~~~l~~~~~t~~-~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (326)
T PRK05963        155 VLFADAAGAVVLAPSAKANSGVLGSQLISDG-SHYDLIKIPAGGSARPFAPERDASEFLMTMQDGRAVFTEAVRMMSGAS  233 (326)
T ss_pred             EEEeecceEEEEEecCCCCCceEEEEEEEcC-CCCCeEEeCCCCcCCCCcccccccccceEecCCHHHHHHHHHHHHHHH
Confidence            679999999999986531  11111111111 123332 2332211             122477878888888888898


Q ss_pred             HHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHH
Q 013297          222 KCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKV  301 (446)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~  301 (446)
                      +.++++.      +++++|||+|++||++.++++++.++|                        +++.++.+        
T Consensus       234 ~~~L~~~------gl~~~did~~~~h~~~~~~~~~~~~~l------------------------~l~~~k~~--------  275 (326)
T PRK05963        234 QNVLASA------AMTPQDIDRFFPHQANARIVDKVCETI------------------------GIPRAKAA--------  275 (326)
T ss_pred             HHHHHHc------CCCHHHCCEEEeCCCCHHHHHHHHHHc------------------------CCCHHHhh--------
Confidence            8888876      899999999999999999999999888                        88876543        


Q ss_pred             HHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEE
Q 013297          302 SQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKL  370 (446)
Q Consensus       302 ~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~  370 (446)
                       .++                +++||+++||+|++|..++++ +++++||+|+++++|+|+++++++++|
T Consensus       276 -~~l----------------~~~Gn~~sas~~~~L~~~~~~-~~~~~Gd~vll~~~G~G~~~~~~ll~~  326 (326)
T PRK05963        276 -STL----------------ETYGNSSAATIPLSLSLANLE-QPLREGERLLFAAAGAGMTGGAVVMRV  326 (326)
T ss_pred             -hhH----------------HhhCcHHHHHHHHHHHHHHHh-CCCCCCCEEEEEEEehhhhheeeEEeC
Confidence             345                899999999999999999988 788899999999999999999999986

>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase

Probab=100.00  E-value=4.9e-49  Score=350.73  Aligned_cols=174  Identities=54%  Similarity=0.864  Sum_probs=152.8

Q ss_pred             CCceeEEeEEEEecCCccccHHHHHHhcCCCcceeEEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEE
Q 013297            1 MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEV   80 (446)
Q Consensus         1 ~~~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~   80 (446)
                      +|++|||++|++|+|+++|++++|++++|++++||++||||++|+|++++||+++||++|++++|++.++++++|++|+|
T Consensus         1 ~p~~VGI~~i~~y~p~~~v~~~~La~~~g~d~~K~~~glgq~~~av~~~~ED~vTmA~nAa~~ll~~~~id~~~Ig~l~v   80 (174)
T PF01154_consen    1 RPQNVGIDAIEFYIPRYYVDQEELAEARGVDPGKYTIGLGQEKMAVPPPDEDIVTMAANAAKPLLDRYNIDPDDIGRLIV   80 (174)
T ss_dssp             --SSEEEEEEEEE-ESEEEEHHHHHHHTTS-TCHHHTTT--SEEEE--TTS-HHHHHHHHHHTTHHHHT-HHHHEEEEEE
T ss_pred             CCccccEeEEEEecCceEecHHHHHHHhCCCHHHhhhhcCeeEEEeCCCcccHHHHHHHHHHHHHHHcCCCHHHccEEEE
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCccCCCCCCccc
Q 013297           81 GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTG  160 (446)
Q Consensus        81 ~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~~~~~~~t~  160 (446)
                      +|||+.|.+|+++++||++||++++++|+++|+++||+|||+||++|.+||+++.|||+++|||++|+++|.+++.|+|+
T Consensus        81 gTES~vD~sKs~~t~v~~ll~~s~~~~~~~~e~k~ACygGTaAL~~a~~~v~s~~~~g~~aLVVasDiA~y~~g~~e~Tq  160 (174)
T PF01154_consen   81 GTESGVDKSKSISTYVHQLLGLSGNPDCRGVEMKQACYGGTAALQNAVNWVASSPWDGRKALVVASDIARYDLGSAEPTQ  160 (174)
T ss_dssp             E-SS-SBSSS-HHHHHHHHTTTTT-SSSEEEEEESGGGHHHHHHHHHHHHHCSTTSTTEEEEEEEEEEE--STTTTGGG-
T ss_pred             eccccccccccHHHHHHHHhCcCCCCceeeeehhhhhHHHHHHHHHHHHHHhcCCCCCCeEEEEeccccccCCCCccccc
Confidence            99999999999999999999997778999999999999999999999999999999999999999999999998889999


Q ss_pred             cccceeeeeccCCC
Q 013297          161 GAAAVVMLVGPDAP  174 (446)
Q Consensus       161 GdGAvA~Ll~~~~~  174 (446)
                      |+|||||||++|+|
T Consensus       161 GAGAVAmLi~~nap  174 (174)
T PF01154_consen  161 GAGAVAMLIGPNAP  174 (174)
T ss_dssp             EEEEEEEEEECS-S
T ss_pred             cceeEEEEecCCCC
Confidence            99999999999975

Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....

>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=100.00  E-value=4.2e-46  Score=372.75  Aligned_cols=308  Identities=16%  Similarity=0.215  Sum_probs=250.3

Q ss_pred             CCceeEEeEEEEecCCccccHHHHHHhcCCCccee--EEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEE
Q 013297            1 MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRL   78 (446)
Q Consensus         1 ~~~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~l   78 (446)
                      |+++++|.++++|+|+++++++|+++..+.+.+++  ++|+.+|++  +.++|+..+|+++|++++|+++|+++++||.|
T Consensus         1 ~~~~~~I~~ig~~~P~~~v~~~e~~~~~~~~~~~i~~~~Gi~~r~~--~~~~~~~~~la~~A~~~al~~ag~~~~~Id~l   78 (325)
T PRK12879          1 MMSYARITGIGTYVPPRVLTNDDLETFIDTSDEWIVQRTGIKERRI--AHVEEYTSDLAIKAAERALARAGLDAEDIDLI   78 (325)
T ss_pred             CCCCCEEEEEEEECCCcEEcHHHHHHhcCCCHHHhhhccCceEEEE--CCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE
Confidence            78999999999999999999999999988776665  467777774  47899999999999999999999999999999


Q ss_pred             EEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCcc-CCC---
Q 013297           79 EVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AEG---  154 (446)
Q Consensus        79 i~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~~---  154 (446)
                      |++|+++++..|+.+.+|++.||+   +++.+++++++|+|++.||.+|.++|++|..  ++||||++|..+. .+.   
T Consensus        79 i~~~~~~~~~~~~~a~~l~~~lg~---~~~~~~~v~~~C~~~~~al~~A~~~l~~g~~--~~~Lvv~~e~~s~~~~~~~~  153 (325)
T PRK12879         79 IVATTTPDYLFPSTASQVQARLGI---PNAAAFDINAACAGFLYGLETANGLITSGLY--KKVLVIGAERLSKVTDYTDR  153 (325)
T ss_pred             EEEcCCCCCCCChHHHHHHHHhCC---CCCcEEEECccchHHHHHHHHHHHHHHcCCC--CEEEEEEehhhcCcCCcccc
Confidence            999999988899999999999997   4578999999999999999999999999965  9999999998732 222   


Q ss_pred             CCCccccccceeeeeccCCC-cccccccccccccccccccccCCCCC----------CcccCChhHHHHHHHHHHHHHHH
Q 013297          155 PARPTGGAAAVVMLVGPDAP-VAFESKLRGSHMSHAYDFYKPNLASE----------YPVVDGKLSQTCYLMALDTCYKC  223 (446)
Q Consensus       155 ~~~~t~GdGAvA~Ll~~~~~-~~~~~~~~g~~~~~~~df~~p~~~~~----------~p~~dG~~s~~~yl~~l~~~~~~  223 (446)
                      ....+|||||+|+||++++. ..+.....++.......++.|..+..          +..++|+..+....+.+++++++
T Consensus       154 ~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  233 (325)
T PRK12879        154 TTCILFGDGAGAVVLEATENEPGFIDYVLGTDGDGGDILYRTGLGTTMDRDALSGDGYIVQNGREVFKWAVRTMPKGARQ  233 (325)
T ss_pred             CceEEEeecceEEEEEecCCCCCeEEEEEEEcCCCCCeEEEcCCCCCCCccccccCccEEEcCHHHHHHHHHHHHHHHHH
Confidence            22357999999999999864 11111111121111112223322221          22356665555556777888888


Q ss_pred             HHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHH
Q 013297          224 LCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQ  303 (446)
Q Consensus       224 ~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~  303 (446)
                      ++++.      +++++|||+|++||++.++++.+.++|                        |++.++.+         .
T Consensus       234 ~L~~~------g~~~~did~~~~h~~~~~~~~~~~~~l------------------------g~~~~~~~---------~  274 (325)
T PRK12879        234 VLEKA------GLTKDDIDWVIPHQANLRIIESLCEKL------------------------GIPMEKTL---------V  274 (325)
T ss_pred             HHHHc------CCCHHHCCEEEECCCCHHHHHHHHHHc------------------------CCCHHHhh---------h
Confidence            88876      799999999999999999999998888                        88876543         2


Q ss_pred             hhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEEe
Q 013297          304 QLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLS  371 (446)
Q Consensus       304 ~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~~  371 (446)
                      ++                +++||+++||++++|.+++++ +.+++||+|+|++||+|+++++++++|+
T Consensus       275 ~~----------------~~~Gn~~sas~~~~L~~~~~~-g~~~~Gd~vll~~~G~G~~~~~~l~~~~  325 (325)
T PRK12879        275 SV----------------EYYGNTSAATIPLALDLALEQ-GKIKPGDTLLLYGFGAGLTWAALLVKWG  325 (325)
T ss_pred             hH----------------hhhCchHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEchhhhhEEEEEEeC
Confidence            34                899999999999999999998 7889999999999999999999999984

>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=100.00  E-value=1.4e-45  Score=369.75  Aligned_cols=306  Identities=15%  Similarity=0.150  Sum_probs=247.9

Q ss_pred             CCceeEEeEEEEecCCccccHHHHHHhcCCCccee--EEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEE
Q 013297            1 MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRL   78 (446)
Q Consensus         1 ~~~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~l   78 (446)
                      |.++++|.++++|+|+++++++++++..+.+.+++  .+|+.+|+++  . +|+..+|+.+|++++|+++|++++|||.|
T Consensus         1 ~~~~~~I~~~g~~lP~~~v~~~~~~~~~~~~~~~i~~~~Gi~~R~~~--~-~~~~~~la~~Aa~~aL~~ag~~~~dId~l   77 (329)
T PRK07204          1 MKRYISIKGIGTYLPKRKVDSLELDKKLDLPEGWVLKKSGVKTRHFV--D-GETSSYMGAEAAKKAVEDAKLTLDDIDCI   77 (329)
T ss_pred             CCCCcEEEEEEEeCCCceecHHHHHHhhCCCHhHhhhccCceEEeec--C-CCCHHHHHHHHHHHHHHHcCCCHHHCCEE
Confidence            78999999999999999999999999999887776  4677777644  5 89999999999999999999999999999


Q ss_pred             EEEeccCCCCCccHHHHHHHHhcccCCC-CceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCccC-CCC-
Q 013297           79 EVGSETVIDKSKSIKTFLMQIFEKFGNT-DIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYA-EGP-  155 (446)
Q Consensus        79 i~~T~t~~~~~ps~a~~l~~~LGl~g~~-~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~-~~~-  155 (446)
                      |++|+++++..|+.+.+|+++||+  .+ .++++|++++|+|++.||.+|..++++|..  ++||||++|..+.. +.. 
T Consensus        78 i~~~~~~~~~~p~~a~~v~~~lgl--~~~~~~~~~v~~~C~~~~~al~~a~~~l~~g~~--~~~Lvv~~e~~s~~~~~~~  153 (329)
T PRK07204         78 ICASGTIQQAIPCTASLIQEQLGL--QHSGIPCFDINSTCLSFITALDTISYAIECGRY--KRVLIISSEISSVGLNWGQ  153 (329)
T ss_pred             EEECCCCCCCCccHHHHHHHHhCC--CCCCceEEEccchhHHHHHHHHHHHHHHHCCCC--CEEEEEEeccccCCCCccc
Confidence            999999988889999999999998  33 479999999999999999999999999965  99999999997432 222 


Q ss_pred             --CCccccccceeeeeccCCCc-cccccccccccccccccc-ccCCC--------------CCCcccCChhHHHHHHHHH
Q 013297          156 --ARPTGGAAAVVMLVGPDAPV-AFESKLRGSHMSHAYDFY-KPNLA--------------SEYPVVDGKLSQTCYLMAL  217 (446)
Q Consensus       156 --~~~t~GdGAvA~Ll~~~~~~-~~~~~~~g~~~~~~~df~-~p~~~--------------~~~p~~dG~~s~~~yl~~l  217 (446)
                        ...+|||||+|+||++++.. .+......++... .++. .|.++              ..+..++|+..+....+.+
T Consensus       154 ~~~~~lfGDGAaA~ll~~~~~~~~il~~~~~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (329)
T PRK07204        154 NESCILFGDGAAAVVITKGDHSSRILASHMETYSSG-AHLSEIRGGGTMIHPREYSEERKEDFLFDMNGRAIFKLSSKYL  232 (329)
T ss_pred             CcceEEEecccEEEEEEEcCCCCcEEEEEEEEecCC-CCceEEecCCcCCCCcccccccccCceEEECCHHHHHHHHHHH
Confidence              23569999999999987541 1110011111110 0110 01100              0012356676666667778


Q ss_pred             HHHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchh
Q 013297          218 DTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRD  297 (446)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~  297 (446)
                      ++++++++++.      +++++|||+|++||++.++++.+.++|                        ++|.++..    
T Consensus       233 ~~~i~~~L~~~------gl~~~did~~~~H~~~~~~~~~i~~~l------------------------~l~~e~~~----  278 (329)
T PRK07204        233 MKFIDKLLMDA------GYTLADIDLIVPHQASGPAMRLIRKKL------------------------GVDEERFV----  278 (329)
T ss_pred             HHHHHHHHHHc------CCCHHHCCEEEeCCCCHHHHHHHHHHc------------------------CCCHHHhh----
Confidence            88998888886      899999999999999999999998888                        78766532    


Q ss_pred             HHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEE
Q 013297          298 LEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKL  370 (446)
Q Consensus       298 ~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~  370 (446)
                           .++                +++||+++||+|++|.+++++ +++++|++|+|+++|+|+++++.+++|
T Consensus       279 -----~~~----------------~~~Gn~~sas~~~~L~~~~~~-g~~~~Gd~vll~~~G~G~s~~~~ll~~  329 (329)
T PRK07204        279 -----TIF----------------EDHGNMIAASIPVALFEAIKQ-KKVQRGNKILLLGTSAGLSIGGILLEY  329 (329)
T ss_pred             -----hhH----------------hhhCcHHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEchhhhheeeEEeC
Confidence                 345                899999999999999999998 788999999999999999999999875

>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=100.00  E-value=1.7e-45  Score=371.83  Aligned_cols=301  Identities=20%  Similarity=0.217  Sum_probs=240.5

Q ss_pred             ceeEEeEEEEecCCccccHHHH-HHhcCCCc---cee--EEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCcc
Q 013297            3 KNVGILAMDIYFPPTCVQQEAL-EAHDGASK---GKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIG   76 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l-~~~~g~~~---~k~--~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId   76 (446)
                      ++++|.++++|+|+++|+++++ .+..+.+.   +++  .+|+.+|+++  .++|++.+||++|++++|+++|++++|||
T Consensus         6 ~~~~I~~~g~~lP~~~v~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~--~~~e~~~~la~~Aa~~aL~~a~~~~~dId   83 (353)
T PRK12880          6 DKAKISGICVSVPEHKICIDDELESVFSNDIKTLKRMKKVIGLNTRYIC--DENTCVSDLGKHAANTLLQGLNIDKNSLD   83 (353)
T ss_pred             cccEEEEEEEECCCeEecHHHHHHHhcCcchhhhhhhhhccCceEEEeC--CCCCCHHHHHHHHHHHHHHHcCCCHHHCC
Confidence            5789999999999999999975 44443221   233  3677777754  68999999999999999999999999999


Q ss_pred             EEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCcc-CCC-
Q 013297           77 RLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AEG-  154 (446)
Q Consensus        77 ~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~~-  154 (446)
                      +||++|+||++..|+++.+|+++||+  .+++.+||+++||+|++.||++|..|+++|.  .+ +|||++|..+. .+. 
T Consensus        84 ~lI~~t~t~d~~~P~~a~~v~~~Lg~--~~~~~~~di~~~C~g~~~aL~~A~~~i~~~~--~~-~LVv~~e~~S~~~~~~  158 (353)
T PRK12880         84 ALIVVTQSPDFFMPSTACYLHQLLNL--SSKTIAFDLGQACAGYLYGLFVAHSLIQSGL--GK-ILLICGDTLSKFIHPK  158 (353)
T ss_pred             EEEEEcCCCCCCCCcHHHHHHHHhCC--CCCceEEehhhhhHHHHHHHHHHHHHHHcCC--CC-EEEEEehhhhccCCcc
Confidence            99999999999999999999999998  5688999999999999999999999999994  48 99999998743 222 


Q ss_pred             --CCCccccccceeeeeccCCCc-c-cccccccccccccccccccCCCC----------------------CCcccCChh
Q 013297          155 --PARPTGGAAAVVMLVGPDAPV-A-FESKLRGSHMSHAYDFYKPNLAS----------------------EYPVVDGKL  208 (446)
Q Consensus       155 --~~~~t~GdGAvA~Ll~~~~~~-~-~~~~~~g~~~~~~~df~~p~~~~----------------------~~p~~dG~~  208 (446)
                        ...++|||||+|+||++++.- . +.....+.+.   .....|.++.                      .+..++|+.
T Consensus       159 d~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~~~~~~---~~~~~p~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  235 (353)
T PRK12880        159 NMNLAPIFGDGVSATLIEKTDFNEAFFELGSDGKYF---DKLIIPKGAMRIPKADIFNDDSLMQTEEFRQLENLYMDGAN  235 (353)
T ss_pred             cCCceeeecccceEEEEEecCCCCceEEEEecCCCC---CeEEecCCCcCCCccccccccccccccccccCceEEEcCHH
Confidence              235789999999999976431 1 1100111111   1111121110                      112467888


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCC
Q 013297          209 SQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLS  288 (446)
Q Consensus       209 s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~  288 (446)
                      .+..+++.++.++++++++.      +++.+|||+|++||++.++++.+.++|                        |++
T Consensus       236 v~~~~~~~~~~~i~~~L~~~------gl~~~did~~v~HQ~~~~i~~~i~~~L------------------------gl~  285 (353)
T PRK12880        236 IFNMALECEPKSFKEILEFS------KVDEKDIAFHLFHQSNAYLVDCIKEEL------------------------KLN  285 (353)
T ss_pred             HHHHHHHHHHHHHHHHHHHc------CCCHHHCCEEEECCCCHHHHHHHHHHh------------------------CCC
Confidence            88888888999999999886      799999999999999999999999998                        888


Q ss_pred             CCccccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEE
Q 013297          289 GDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSL  368 (446)
Q Consensus       289 ~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l  368 (446)
                      ++++..        ..+                +++||+++||+|+.|..++++ +++    +++|+++|+|++|++.++
T Consensus       286 ~ek~~~--------~~l----------------~~~GNtssasip~~L~~~~~~-~~~----~~ll~~~G~G~s~g~~ll  336 (353)
T PRK12880        286 DDKVPN--------FIM----------------EKYANLSACSLPALLCELDTP-KEF----KASLSAFGAGLSWGSAVL  336 (353)
T ss_pred             HHHhhh--------hhH----------------HhhCCHHHHHHHHHHHHHHHc-CCc----EEEEEEEchhhhheEeEE
Confidence            765421        123                899999999999999999887 443    599999999999999999


Q ss_pred             EEeC
Q 013297          369 KLSE  372 (446)
Q Consensus       369 ~~~~  372 (446)
                      +|.+
T Consensus       337 ~~~~  340 (353)
T PRK12880        337 NFKD  340 (353)
T ss_pred             EECC
Confidence            9965

>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional

Probab=100.00  E-value=1e-44  Score=363.25  Aligned_cols=304  Identities=21%  Similarity=0.267  Sum_probs=245.1

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhcCCCccee--EEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEE
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEV   80 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~   80 (446)
                      |.|+|.++++|+|+++|+++++++..+.+.+++  ++|+.+|+  +..++++..+|+.+|++++|+++|+++++||.||+
T Consensus         1 ~~v~I~~~g~~lP~~~v~~~e~~~~~~~~~~~i~~~~gi~~r~--~~~~~~~~~~la~~A~~~aL~~ag~~~~dId~vi~   78 (326)
T CHL00203          1 MGVHILSTGSSVPNFSVENQQFEDIIETSDHWISTRTGIKKRH--LAPSSTSLTKLAAEAANKALDKAHMDPLEIDLIIL   78 (326)
T ss_pred             CccEEEEEEEECCCeEEcHHHHHHhcCCChhhEeeccCeEEEE--eCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence            568999999999999999999999998766666  46777776  44789999999999999999999999999999999


Q ss_pred             EeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCcc-CCC---CC
Q 013297           81 GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AEG---PA  156 (446)
Q Consensus        81 ~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~~---~~  156 (446)
                      +|+++.+.. +.+.++++.||+   .++.+++++++|+|++.||++|..+|++|..  +++|||++|..+. .+.   ..
T Consensus        79 ~s~~~~~~~-~~~~~v~~~Lg~---~~~~~~~v~~~Casg~~al~~A~~~i~sg~~--~~~Lvv~~e~~s~~~~~~~~~~  152 (326)
T CHL00203         79 ATSTPDDLF-GSASQLQAEIGA---TRAVAFDITAACSGFILALVTATQFIQNGSY--KNILVVGADTLSKWIDWSDRKT  152 (326)
T ss_pred             EeCCCCCCC-chHHHHHHHhCC---CCCceeeecccchhHHHHHHHHHHHHHcCCC--CEEEEEEehhhhCcCCcccCCc
Confidence            998887654 567899999996   5678999999999999999999999999966  9999999999743 222   23


Q ss_pred             CccccccceeeeeccCCCcc---cccccccccccccccc-cc------------cCCCCCCcccCChhHHHHHHHHHHHH
Q 013297          157 RPTGGAAAVVMLVGPDAPVA---FESKLRGSHMSHAYDF-YK------------PNLASEYPVVDGKLSQTCYLMALDTC  220 (446)
Q Consensus       157 ~~t~GdGAvA~Ll~~~~~~~---~~~~~~g~~~~~~~df-~~------------p~~~~~~p~~dG~~s~~~yl~~l~~~  220 (446)
                      ..+|||||+|+||++.+.-.   +.....+.+... ..+ ..            |.....+..++|+..+...++.++++
T Consensus       153 ~~~fgDga~A~ll~~~~~~~~~~~~~~t~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  231 (326)
T CHL00203        153 CILFGDGAGAAIIGASYENSILGFKLCTDGKLNSH-LQLMNKPVNNQSFGTTKLPQGQYQSISMNGKEVYKFAVFQVPAV  231 (326)
T ss_pred             eEEEcceeeEEEEEEcCCCCeEEEEEEEcCCCcce-EEecCCCCCcccccccccccCCcceEEECCHHHHHHHHHHHHHH
Confidence            46799999999999875311   110011111100 000 01            11111122357777666666778888


Q ss_pred             HHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHH
Q 013297          221 YKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEK  300 (446)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k  300 (446)
                      +++++++.      +++++|||+|++||++.++++.+.++|                        |+|.++..       
T Consensus       232 i~~~L~~~------g~~~~did~~~~hq~~~~~~~~~~~~l------------------------gl~~~k~~-------  274 (326)
T CHL00203        232 IIKCLNAL------NISIDEVDWFILHQANKRILEAIANRL------------------------SVPNSKMI-------  274 (326)
T ss_pred             HHHHHHHc------CCCHHHCCEEEECCCCHHHHHHHHHHh------------------------CCCHHHhh-------
Confidence            88888876      899999999999999999999999888                        88876543       


Q ss_pred             HHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEEe
Q 013297          301 VSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLS  371 (446)
Q Consensus       301 ~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~~  371 (446)
                        .++                +++||++|||++++|++++++ +++++||+|+|+|+|+|+++++++++|+
T Consensus       275 --~~l----------------~~~Gn~~sasi~~~L~~~~~~-g~~~~Gd~vll~~~G~G~s~~~~v~~~~  326 (326)
T CHL00203        275 --TNL----------------EKYGNTSAASIPLALDEAIQN-NKIQPGQIIVLSGFGAGLTWGAIVLKWK  326 (326)
T ss_pred             --hHH----------------HhhCcHHHHHHHHHHHHHHHh-CCCCCCCEEEEEEEchhhhheEEEEEeC
Confidence              345                899999999999999999998 7889999999999999999999999985

>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=100.00  E-value=3.3e-45  Score=368.36  Aligned_cols=306  Identities=20%  Similarity=0.204  Sum_probs=247.7

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhc-------CCCccee--EEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcC
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHD-------GASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPK   73 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~-------g~~~~k~--~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~   73 (446)
                      .+|+|.++++|+|+++++++++++..       +.+++++  .+|+.+|++  .+++++..+|+++|++++|+++|++++
T Consensus         4 ~~v~I~~~g~~lP~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~--~~~~~~~~~la~~Aa~~aL~~ag~~~~   81 (338)
T PRK09258          4 SNVAILSLAYELAPVVVTSSEIEERLAPLYERLRLPPGQLEALTGIRERRW--WPEGTQLSDGAIAAGRKALAEAGIDPS   81 (338)
T ss_pred             cceEEEEEEecCCCccCcHHHHHHHhhhcccccCCChhHhhhhcCceeEec--CCCCCCHHHHHHHHHHHHHHHcCCCHH
Confidence            46999999999999999999998864       3455555  367777774  478999999999999999999999999


Q ss_pred             CccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCccC-
Q 013297           74 QIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYA-  152 (446)
Q Consensus        74 dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~-  152 (446)
                      +||.|+++|+++++..|+++.+|+++||+  .+++.++|++++|+|++.||++|..+|++|..  ++||||++|..+.. 
T Consensus        82 ~Id~li~~s~~~~~~~p~~a~~v~~~lgl--~~~~~~~~v~~~C~~~~~al~~A~~~i~~g~~--~~~Lvv~~e~~s~~~  157 (338)
T PRK09258         82 DIGLLINTSVCRDYLEPATACRVHHNLGL--PKSCANFDVSNACLGFLNGMLDAANMIELGQI--DYALVVSGESAREIV  157 (338)
T ss_pred             HCCEEEEEcCCCCCCCChHHHHHHHHcCC--CCCCceeehhhhhHHHHHHHHHHHHHHHcCCC--CEEEEEEecccchhc
Confidence            99999999999989899999999999998  55789999999999999999999999999955  99999999987421 


Q ss_pred             ---------CCCC---------CccccccceeeeeccCCCcccccccccccccccccccccC-CCCCCcccCChhHHHHH
Q 013297          153 ---------EGPA---------RPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPN-LASEYPVVDGKLSQTCY  213 (446)
Q Consensus       153 ---------~~~~---------~~t~GdGAvA~Ll~~~~~~~~~~~~~g~~~~~~~df~~p~-~~~~~p~~dG~~s~~~y  213 (446)
                               +...         ..+|||||+|+||++++...-...+.+.......+++... ....+..++++..+..+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (338)
T PRK09258        158 EATIDRLLAPETTREDFAQSFATLTLGSGAAAAVLTRGSLHPRGHRLLGGVTRAATEHHELCQGGRDGMRTDAVGLLKEG  237 (338)
T ss_pred             cchhhhhccCccchhhhhhccceEEecccceEEEEecCCCCCCcceeeeeeeecCCCcccccccCccceEEcHHHHHHHH
Confidence                     1111         2469999999999987531000112222221111222110 11223456888888888


Q ss_pred             HHHHHHHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccc
Q 013297          214 LMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESY  293 (446)
Q Consensus       214 l~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~  293 (446)
                      ++.+++++++++++.      +++++|||+|++||++.++++.+.++|                        |+|.++.+
T Consensus       238 ~~~~~~~~~~~L~~~------g~~~~did~~i~H~~~~~~~~~~~~~l------------------------gl~~~k~~  287 (338)
T PRK09258        238 VELAVDTWEAFLAQL------GWAVEQVDRVICHQVGAAHTRAILKAL------------------------GIDPEKVF  287 (338)
T ss_pred             HHHHHHHHHHHHHHc------CCCHHHCCEEecCCCCHHHHHHHHHHh------------------------CCCHHHce
Confidence            888888998888886      799999999999999999999998888                        88876654


Q ss_pred             cchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEE
Q 013297          294 QSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKL  370 (446)
Q Consensus       294 ~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~  370 (446)
                               .++                +++|||+++|++++|++++++ +++++||+|+|++||+|+++++++++|
T Consensus       288 ---------~~~----------------~~~GN~~sas~~~~L~~~~~~-g~~~~Gd~vll~~~G~G~s~~~~~~~~  338 (338)
T PRK09258        288 ---------TTF----------------PTLGNMGPASLPITLAMAAEE-GFLKPGDRVALLGIGSGLNCSMLEVKW  338 (338)
T ss_pred             ---------ehH----------------hhhCCcHHhHHHHHHHHHHHh-CCCCCCCEEEEEEechhHhhHhHeeeC
Confidence                     233                799999999999999999988 788999999999999999999999986

>PRK06840 hypothetical protein; Validated

Probab=100.00  E-value=8e-44  Score=358.55  Aligned_cols=308  Identities=17%  Similarity=0.125  Sum_probs=240.0

Q ss_pred             CCceeEEeEEEEecCCccccHHHHHHhcCCCccee--EEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEE
Q 013297            1 MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRL   78 (446)
Q Consensus         1 ~~~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~l   78 (446)
                      |||+|+|.++++|+|++.|+++++++..|.+.+++  ++|+.+|+  ++.++|+..+|+++|++++|+++|+++++||.|
T Consensus         1 ~~~~v~I~~~~~~lP~~~v~~~~l~~~~g~~~~~~~~~~Gi~~r~--~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~l   78 (339)
T PRK06840          1 MEMNVGIVGTGVYLPKDVMTAEEIAEKTGIPEEVVIEKFGIYEKP--VPGPEDHTSDMAIAAAKPALKQAGVDPAAIDVV   78 (339)
T ss_pred             CCCceEEEEEEEeCCCcccCHHHHHHHhCCCHHHHhhhcCcceEe--eCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE
Confidence            89999999999999999999999999999887776  35666666  557889999999999999999999999999999


Q ss_pred             EEEec-cCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHc-CCCCCCEEEEEEeecCcc-C---
Q 013297           79 EVGSE-TVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVES-SSWDGRYGLVVCTDSAVY-A---  152 (446)
Q Consensus        79 i~~T~-t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~s-g~~~~~~aLVVasD~~~y-~---  152 (446)
                      |++++ ++++..|+.+.+|+++||+   ++++++++.++|+|++.||.+|..+|++ |..  +++|||++|..+. .   
T Consensus        79 i~~~~~~~~~~~p~~a~~l~~~lGl---~~~~~~~v~~~C~~~~~al~~A~~~l~~~g~~--~~~Lvv~~~~~s~~~~~~  153 (339)
T PRK06840         79 IYIGSEHKDYPVWSSAPKIQHEIGA---KNAWAFDIMAVCASFPIALKVAKDLLYSDPSI--ENVLLVGGYRNSDLVDYD  153 (339)
T ss_pred             EEeccCCCCCCCCchHHHHHHHhCC---CCcccccccccchHHHHHHHHHHHHHhcCCCc--cEEEEEeecccccccCcC
Confidence            97765 4566789999999999997   5688999999999999999999999999 755  8999999998632 1   


Q ss_pred             CCCCC--ccccccceeeeeccCCC-cccccccccccccccccccccCCCCCCc-------------ccCChhHHHHHH--
Q 013297          153 EGPAR--PTGGAAAVVMLVGPDAP-VAFESKLRGSHMSHAYDFYKPNLASEYP-------------VVDGKLSQTCYL--  214 (446)
Q Consensus       153 ~~~~~--~t~GdGAvA~Ll~~~~~-~~~~~~~~g~~~~~~~df~~p~~~~~~p-------------~~dG~~s~~~yl--  214 (446)
                      +....  .+|||||+|+||++++. ..+......+.......+..|.++...|             .+.+...+...+  
T Consensus       154 ~~~~~~~~~~GDgAaA~ll~~~~~~~~il~~~~~t~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (339)
T PRK06840        154 NPRTRFMFNFAAGGSAALLKKDAGKNRILGSAIITDGSFSEDVRVPAGGTKQPASPETVENRQHYLDVIDPESMKERLDE  233 (339)
T ss_pred             CCCeeeeccCCCceeEEEEEecCCCCceEEEEEEEcCCccceEEecCCCcCCCCcccccccccceEEEcCcHHHHHHhHh
Confidence            11122  34799999999998764 1211101111111111222333222211             112233333222  


Q ss_pred             ---HHHHHHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCc
Q 013297          215 ---MALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDE  291 (446)
Q Consensus       215 ---~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~  291 (446)
                         ..+++++++++++.      +++++|||++++||++.++++.+.++|                        |++.++
T Consensus       234 ~~~~~~~~~i~~~L~~~------gl~~~did~~~~h~~~~~~~~~~~~~L------------------------gl~~~~  283 (339)
T PRK06840        234 VSIPNFLKVIREALRKS------GYTPKDIDYLAILHMKRSAHIALLEGL------------------------GLTEEQ  283 (339)
T ss_pred             hHHHHHHHHHHHHHHHc------CCCHHHCCEEEECCcCHHHHHHHHHHc------------------------CCCHHH
Confidence               24556777777765      899999999999999999999988888                        888665


Q ss_pred             cccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEEe
Q 013297          292 SYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLS  371 (446)
Q Consensus       292 ~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~~  371 (446)
                      .+          +                .+++||++++|++++|.+++++ +++++|++++|+++|+|+++++++++|.
T Consensus       284 ~~----------~----------------~~~~Gn~~sas~~~~L~~~~~~-~~~~~Gd~ill~~~G~G~s~~~~~l~~~  336 (339)
T PRK06840        284 AI----------Y----------------LDEYGHLGQLDQILSLHLALEQ-GKLKDGDLVVLVSAGTGYTWAATVIRWG  336 (339)
T ss_pred             eE----------e----------------HHhccchhhhhHHHHHHHHHHc-CCCCCCCEEEEEEEehhhheeEEEEEec
Confidence            32          1                2799999999999999999987 7788999999999999999999999997


Q ss_pred             C
Q 013297          372 E  372 (446)
Q Consensus       372 ~  372 (446)
                      +
T Consensus       337 ~  337 (339)
T PRK06840        337 P  337 (339)
T ss_pred             C
Confidence            5

>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III

Probab=100.00  E-value=9.5e-44  Score=362.95  Aligned_cols=305  Identities=16%  Similarity=0.188  Sum_probs=242.7

Q ss_pred             CceeEEeEEEEecCCccccHHHHHHhcCCCccee--EEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEE
Q 013297            2 AKNVGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLE   79 (446)
Q Consensus         2 ~~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li   79 (446)
                      +++++|.+++.|+|+++++++++.+..+.+++++  ++|+.+|+  ++.++|+..+|+++|++++|+++|++++|||.||
T Consensus        45 ~~~~~I~g~g~~lP~~~v~n~el~~~~~~~~~~i~~~tGi~~R~--~~~~~~~~~~La~~Aa~~aL~~agi~~~dId~li  122 (379)
T PLN02326         45 GSGSKLVGCGSAVPKLLITNDDLSKLVDTSDEWIATRTGIRNRR--VLSGDETLTSLAVEAAKKALEMAGVDPEDVDLVL  122 (379)
T ss_pred             cCCcEEEEEEEECCCceecHHHHHHhcCCchhheecccCcceEe--ecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence            3679999999999999999999999988777776  46777776  4478999999999999999999999999999999


Q ss_pred             EEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecC-ccCCCCC--
Q 013297           80 VGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-VYAEGPA--  156 (446)
Q Consensus        80 ~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~-~y~~~~~--  156 (446)
                      ++|+++++. ++.+.+|+++||+   .++.++|++++|+|++.||++|..+|++|..  +++|||++|.. .+.++.+  
T Consensus       123 ~~s~~~~~~-~~~a~~v~~~LG~---~~~~~~dv~~~Ca~~~~aL~~A~~~l~~g~~--~~vLVv~~e~~s~~~~~~d~~  196 (379)
T PLN02326        123 LCTSSPDDL-FGSAPQVQAALGC---TNALAFDLTAACSGFVLGLVTAARFIRGGGY--KNVLVIGADALSRYVDWTDRG  196 (379)
T ss_pred             EEeCCCCcc-CcHHHHHHHHhCC---CCCceeeccccchHHHHHHHHHHHHHHcCCC--CEEEEEEechhcCCCCccccC
Confidence            999988775 4678999999997   5789999999999999999999999999965  99999999997 3433322  


Q ss_pred             -CccccccceeeeeccCCCc--c---ccccccccccccc----ccc-----cccC----------CCCCCcccCChhHHH
Q 013297          157 -RPTGGAAAVVMLVGPDAPV--A---FESKLRGSHMSHA----YDF-----YKPN----------LASEYPVVDGKLSQT  211 (446)
Q Consensus       157 -~~t~GdGAvA~Ll~~~~~~--~---~~~~~~g~~~~~~----~df-----~~p~----------~~~~~p~~dG~~s~~  211 (446)
                       ..+|||||+|+||++++..  .   +.....+.+....    .+.     ..|.          ....+..++|+..+.
T Consensus       197 ~~~lfGDGAaAvlL~~~~~~~~~i~~~~~~t~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~  276 (379)
T PLN02326        197 TCILFGDGAGAVVLQACDDDEDGLLGFDMHSDGNGHKHLHATFKGEDDDSSGGNTNGVGDFPPKKASYSCIQMNGKEVFK  276 (379)
T ss_pred             ceEEEcceeEEEEEEEcCCCCCceEEEEEEEcCCCCCeEEecCCCCcccccccccccccccccccccccceEecCHHHHH
Confidence             3479999999999986521  1   1100111110000    000     0000          000112356666666


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCc
Q 013297          212 CYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDE  291 (446)
Q Consensus       212 ~yl~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~  291 (446)
                      ...+.+++++++++++.      +++++|||+|++||++.++++.+.++|                        |++.++
T Consensus       277 ~~~~~~~~~i~~~L~~~------gl~~~dId~~v~Hq~n~~~~~~~~~~L------------------------gl~~ek  326 (379)
T PLN02326        277 FAVRCVPQVIESALQKA------GLTAESIDWLLLHQANQRIIDAVAQRL------------------------GIPPEK  326 (379)
T ss_pred             HHHHHHHHHHHHHHHHc------CCCHHHCCEEEECCCCHHHHHHHHHHc------------------------CCCHHH
Confidence            56677778888888776      799999999999999999999998888                        888765


Q ss_pred             cccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEE
Q 013297          292 SYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKL  370 (446)
Q Consensus       292 ~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~  370 (446)
                      +.         .++                +++||+++||++++|++++++ +++++||+|+|++||+|+++++.+++|
T Consensus       327 ~~---------~~l----------------~~~GNt~sAsi~~~L~~~~~~-g~~~~Gd~vll~~~G~G~t~~~~ll~~  379 (379)
T PLN02326        327 VI---------SNL----------------ANYGNTSAASIPLALDEAVRS-GKVKKGDVIATAGFGAGLTWGSAIVRW  379 (379)
T ss_pred             ee---------ecH----------------hhcCcHHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEChhheeeEEEEEC
Confidence            53         233                799999999999999999998 788999999999999999999999986

>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III

Probab=100.00  E-value=1.3e-43  Score=353.68  Aligned_cols=304  Identities=19%  Similarity=0.234  Sum_probs=248.2

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhcCCCccee--EEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEE
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEV   80 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~   80 (446)
                      |.++|.++++|+|+++++++++++..+.+..++  +.|+.+|+  ++.+++++.+|+.+|++++|+++|+++++||.|++
T Consensus         1 ~~~~I~~i~~~~P~~~~~~~~~~~~~~~~~~~i~~~~gi~~r~--~~~~~~~~~~la~~A~~~al~~agl~~~~Id~~i~   78 (318)
T TIGR00747         1 MYAGILGTGSYLPEKVLTNADLEKMVDTSDEWIVTRTGIKERR--IAADDETSSTMGFEAAKRAIENAGISKDDIDLIIV   78 (318)
T ss_pred             CCCEEEEEEEECCCceecHHHHHHhcCCchHHeecccCceEEE--ECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence            468999999999999999999999988766555  35666766  55789999999999999999999999999999999


Q ss_pred             EeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCcc-CCCC---C
Q 013297           81 GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AEGP---A  156 (446)
Q Consensus        81 ~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~~~---~  156 (446)
                      +++++++..|+.+.+|++.||+   +++++++++++|++++.||+.|..+|++|..  +++|||++|.... .+..   .
T Consensus        79 ~~~~~~~~~~~~a~~l~~~lGl---~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~--~~~Lvv~~e~~~~~~~~~~~~~  153 (318)
T TIGR00747        79 ATTTPDHAFPSAACMVQAYLGI---KGIPAFDLSAACAGFIYALSVAKQYIESGKY--KTVLVVGAEKLSSTLDWTDRGT  153 (318)
T ss_pred             ECCCCCCCCChHHHHHHHHhCC---CCCcEeehhhhhHHHHHHHHHHHHHHHcCCC--CEEEEEEehhhcCcCCcCCCCe
Confidence            9999888789999999999997   5678999999999999999999999999966  9999999998732 2221   2


Q ss_pred             CccccccceeeeeccCCC-ccccccccccccccccc-ccccCC------CCCCcccCChhHHHHHHHHHHHHHHHHHHHh
Q 013297          157 RPTGGAAAVVMLVGPDAP-VAFESKLRGSHMSHAYD-FYKPNL------ASEYPVVDGKLSQTCYLMALDTCYKCLCSKY  228 (446)
Q Consensus       157 ~~t~GdGAvA~Ll~~~~~-~~~~~~~~g~~~~~~~d-f~~p~~------~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~  228 (446)
                      ..+|||||+|+||++++. ..+......+... ..+ ++.|..      ...+..+++...+..+++.+.+++++++++.
T Consensus       154 ~~~~GDGAaA~lL~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  232 (318)
T TIGR00747       154 CVLFGDGAGAVVLGESEDPGGIISTHLGADGT-QGEALYLPAGGRPTSGPSPFITMEGNEVFKHAVRKMGDVVEETLEAN  232 (318)
T ss_pred             EEEEecceeEEEEeecCCCCcEEEEEEEEcCC-CcceEEECCCCcCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHc
Confidence            356999999999999864 2111101111111 112 222321      1223345677777778888888888888876


Q ss_pred             hhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhh
Q 013297          229 EKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKP  308 (446)
Q Consensus       229 ~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~  308 (446)
                            ++.++|||||++|+++.++++++.+.|                        |++.++.+         .++   
T Consensus       233 ------g~~~~di~~~~~h~~~~~~~~~~~~~l------------------------gi~~~k~~---------~~~---  270 (318)
T TIGR00747       233 ------GLDPEDIDWFVPHQANLRIIEALAKRL------------------------ELDMSQVV---------KTV---  270 (318)
T ss_pred             ------CCCHHHCCEEEECCCCHHHHHHHHHHc------------------------CCCHHHee---------ehH---
Confidence                  799999999999999999999998888                        88877654         234   


Q ss_pred             hhhhccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEE
Q 013297          309 LYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKL  370 (446)
Q Consensus       309 ~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~  370 (446)
                                   +++||+++||++++|++++++ +.+.+||+|++++||+|+++++++++|
T Consensus       271 -------------~~~Gn~~sas~~~~L~~~~~~-~~~~~Gd~vll~~~G~G~t~~~~~l~~  318 (318)
T TIGR00747       271 -------------HKYGNTSAASIPLALDELLRT-GRIKPGDLLLLVAFGGGLTWGAALVRF  318 (318)
T ss_pred             -------------hhhCCHHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEehhheeeEEEEEC
Confidence                         789999999999999999998 788999999999999999999999986

Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.

>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems

Probab=100.00  E-value=1.9e-43  Score=352.38  Aligned_cols=300  Identities=21%  Similarity=0.237  Sum_probs=244.9

Q ss_pred             eeEEeEEEEecCCccccHHHHHHhcCCCccee--EEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEE
Q 013297            4 NVGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVG   81 (446)
Q Consensus         4 ~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~   81 (446)
                      +++|.++++|+|+++++++++.+..+.+.+++  +.|+.+|+  ++.++++..+|+.+|++++|+++|+++++||.||++
T Consensus         1 ~~~I~~i~~~lP~~~~~~~~~~~~~~~~~~~~~~~~Gi~~r~--~~~~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~   78 (320)
T cd00830           1 NARILGIGSYLPERVVTNDELEKRLDTSDEWIRTRTGIRERR--IADPGETTSDLAVEAAKKALEDAGIDADDIDLIIVA   78 (320)
T ss_pred             CCEEEEEEEECCCcEEcHHHHHHHcCCCHHHhhhccCceEEe--eCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence            58999999999999999999999988877776  35666666  557889999999999999999999999999999999


Q ss_pred             eccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCcc-CC---CCCC
Q 013297           82 SETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AE---GPAR  157 (446)
Q Consensus        82 T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~---~~~~  157 (446)
                      |+++.+..|+.+.+|++.||+   +++++++++++|++++.||..|..+|++|..  +++|||++|..+. .+   ....
T Consensus        79 ~~~~~~~~~~~~~~l~~~lg~---~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~--~~vLvv~~e~~s~~~~~~~~~~~  153 (320)
T cd00830          79 TSTPDYLFPATACLVQARLGA---KNAAAFDINAACSGFLYGLSTAAGLIRSGGA--KNVLVVGAETLSRILDWTDRSTA  153 (320)
T ss_pred             cCCCCCCCCcHHHHHHHHhCC---CCCcEeeccccchHHHHHHHHHHHHHHcCCC--CEEEEEEehhhccccCcccCCce
Confidence            999888789999999999997   4789999999999999999999999999965  9999999999742 22   2234


Q ss_pred             ccccccceeeeeccCCC-ccccccccccccccccc-ccccCCCC-----------CCcccCChhHHHHHHHHHHHHHHHH
Q 013297          158 PTGGAAAVVMLVGPDAP-VAFESKLRGSHMSHAYD-FYKPNLAS-----------EYPVVDGKLSQTCYLMALDTCYKCL  224 (446)
Q Consensus       158 ~t~GdGAvA~Ll~~~~~-~~~~~~~~g~~~~~~~d-f~~p~~~~-----------~~p~~dG~~s~~~yl~~l~~~~~~~  224 (446)
                      .+|||||+|+||++++. ..+......+... ..| +..|.++.           .+..++++..+..+.+.+.++++.+
T Consensus       154 ~~~GDgAaA~ll~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  232 (320)
T cd00830         154 VLFGDGAGAVVLEATEEDPGILDSVLGSDGS-GADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEA  232 (320)
T ss_pred             EEEeccceEEEEEecCCCCcEEEEEEEEcCC-CCCeEEeCCCCcCCccccccccCccEEEcChHHHHHHHHhhHHHHHHH
Confidence            78999999999999864 2111101111111 111 11121111           1233567777777888888899988


Q ss_pred             HHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHh
Q 013297          225 CSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQ  304 (446)
Q Consensus       225 ~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~  304 (446)
                      +++.      +++++|||+|++||++.++++++.++|                        |++.++.+         .+
T Consensus       233 l~~~------g~~~~di~~~~~h~~~~~~~~~~~~~l------------------------gl~~~~~~---------~~  273 (320)
T cd00830         233 LEKA------GLTPDDIDWFVPHQANLRIIEAVAKRL------------------------GLPEEKVV---------VN  273 (320)
T ss_pred             HHHc------CCCHHHCCEEEECCCCHHHHHHHHHHh------------------------CCCHHHhh---------hh
Confidence            8886      799999999999999999999998888                        88866543         23


Q ss_pred             hhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEE
Q 013297          305 LAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFS  367 (446)
Q Consensus       305 ~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~  367 (446)
                      +                +++||+++||+|++|.+++++ +++++|++|+|+|+|+|+++++++
T Consensus       274 ~----------------~~~Gn~~sas~~~~L~~~~~~-~~~~~G~~vll~~~G~G~~~~~~l  319 (320)
T cd00830         274 L----------------DRYGNTSAASIPLALDEAIEE-GKLKKGDLVLLLGFGAGLTWGAAL  319 (320)
T ss_pred             H----------------HhhCcHHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEchHHhhHHhh
Confidence            4                799999999999999999998 788899999999999999998765

It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.

>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=100.00  E-value=3.7e-42  Score=343.33  Aligned_cols=306  Identities=20%  Similarity=0.221  Sum_probs=249.2

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhcCCCccee--EEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEE
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEV   80 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~   80 (446)
                      +.|+|.++++|+|+++++++++.+..+.+.+++  ++|+.+|++  +.++++..+|+.+|++++|+++|+++++||.|++
T Consensus         2 ~~v~I~ai~~~lP~~~~~~~~~~~~~~~~~~~i~~~~gi~~r~~--~~~~~~~~~la~~A~~~al~~agl~~~~id~vi~   79 (319)
T PRK09352          2 MYAKILGTGSYLPERVVTNDDLEKMVDTSDEWIVTRTGIKERRI--AAPDETTSDLATEAAKKALEAAGIDPEDIDLIIV   79 (319)
T ss_pred             CceEEEEEEEECCCeEEcHHHHHHHcCCCHHHhhhhcCeEEEEe--CCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence            579999999999999999999999988766655  467777764  4789999999999999999999999999999999


Q ss_pred             EeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCccC-CC---CC
Q 013297           81 GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYA-EG---PA  156 (446)
Q Consensus        81 ~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~-~~---~~  156 (446)
                      +|+++....|+.+.+|++.||+   .++++++++++|++++.||..|..+|++|..  +++||+++|..+.. +.   ..
T Consensus        80 ~~~~~~~~~~~~~~~i~~~lG~---~~~~~~~v~~~Casg~~al~~A~~~i~~g~~--~~vLvv~~e~~s~~~~~~~~~~  154 (319)
T PRK09352         80 ATTTPDYAFPSTACLVQARLGA---KNAAAFDLSAACSGFVYALSTADQFIRSGAY--KNVLVIGAEKLSRIVDWTDRST  154 (319)
T ss_pred             EcCCCCCCCchHHHHHHHHhCC---CCCcEeeccccchhHHHHHHHHHHHHHcCCC--CEEEEEEehhhccccCcccCCc
Confidence            9999887788999999999997   5688999999999999999999999999966  99999999987421 21   12


Q ss_pred             CccccccceeeeeccCCCcccccccccccccccccccccCCCCC------CcccCChhHHHHHHHHHHHHHHHHHHHhhh
Q 013297          157 RPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASE------YPVVDGKLSQTCYLMALDTCYKCLCSKYEK  230 (446)
Q Consensus       157 ~~t~GdGAvA~Ll~~~~~~~~~~~~~g~~~~~~~df~~p~~~~~------~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~  230 (446)
                      ..+|||||+|+||++++...+......+.......+..|.+...      +..++|+..++.+.+.+.+++++++++.  
T Consensus       155 ~~~~gDGaaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~--  232 (319)
T PRK09352        155 CVLFGDGAGAVVLGASEEPGILSTHLGSDGSYGDLLYLPGGGSRGPASPGYLRMEGREVFKFAVRELAKVAREALEAA--  232 (319)
T ss_pred             eEEEeccceEEEEEEcCCCCeEEEEEEEcCCCCCeEEeCCCCCCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHc--
Confidence            34799999999999986311110011111111112233443322      2235677777778888888888888886  


Q ss_pred             hhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhh
Q 013297          231 LEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLY  310 (446)
Q Consensus       231 ~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~  310 (446)
                          +++++|||+|++|+++.++++.+.+.|                        |+|.++..         .++     
T Consensus       233 ----g~~~~di~~~~~h~~~~~~~~~~~~~l------------------------g~~~~~~~---------~~~-----  270 (319)
T PRK09352        233 ----GLTPEDIDWLVPHQANLRIIDATAKKL------------------------GLPMEKVV---------VTV-----  270 (319)
T ss_pred             ----CCCHHHCCEEEECCCCHHHHHHHHHHh------------------------CCCHHHhh---------hhH-----
Confidence                799999999999999999999998888                        88876532         234     


Q ss_pred             hhccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEEe
Q 013297          311 DAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLS  371 (446)
Q Consensus       311 ~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~~  371 (446)
                                 .++||+++||++++|++++++ +++.+||+|+++|+|+|+++++++++|+
T Consensus       271 -----------~~~Gn~~~a~~~~~L~~~~~~-g~~~~Gd~vll~s~G~G~~~~~~ll~~~  319 (319)
T PRK09352        271 -----------DKYGNTSAASIPLALDEAVRD-GRIKRGDLVLLEGFGGGLTWGAALVRWP  319 (319)
T ss_pred             -----------HhhCCHHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEchhheeEEEEEEeC
Confidence                       799999999999999999998 7788999999999999999999999984

>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=100.00  E-value=9.1e-42  Score=348.25  Aligned_cols=312  Identities=19%  Similarity=0.176  Sum_probs=236.2

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhcCCCc-------cee--EEeecceEEecCC---CCCCHHHHHHHHHHHHHHHCCC
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHDGASK-------GKY--TIGLGQECMAFCS---EVEDVISMSLTAVTNLLEKYKI   70 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~-------~k~--~~Glg~r~~av~~---~~Ed~~~lA~~Aa~~aL~~agi   70 (446)
                      |+|+|.+++.|+|+++|+|++++++.+...       +|+  ++|+.+|+++.++   +.++..+|+++|++++|+++|+
T Consensus         1 ~~v~I~gig~~lP~~~v~n~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~La~~A~~~aL~~agi   80 (378)
T PRK06816          1 MNVYITSTGAFLPGEPVSNDEMEAYLGLINGKPSRARRIILRNNGIKTRHYALDPEGRPTHSNAQMAAEAIRDLLDDAGF   80 (378)
T ss_pred             CCeEEEeeeecCCCCccCHHHHHHHHhhccCCcHHHHHHHHHhCCCceEEEEECCCCCCCCCHHHHHHHHHHHHHHHcCC
Confidence            579999999999999999999998876432       233  4799999987543   2368999999999999999999


Q ss_pred             CcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCc
Q 013297           71 DPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV  150 (446)
Q Consensus        71 ~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~  150 (446)
                      ++++||.||++|+++++..|+.+.+|++.||+   +++.+++++++|+|++.||+.|..+|++|..  ++||||++|.++
T Consensus        81 ~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl---~~~~~~~v~~~Cas~~~al~~A~~~i~sg~~--~~vLvv~~E~~s  155 (378)
T PRK06816         81 SLGDIELLACGTSQPDQLMPGHASMVHGELGA---PPIEVVSSAGVCAAGMMALKYAYLSVKAGES--RNAVATASELAS  155 (378)
T ss_pred             CHHHCCEEEEEECCCCcCChHHHHHHHhhCCC---CCCceeeecCcCHHHHHHHHHHHHHHHCCCC--CEEEEEeEccch
Confidence            99999999999999988889999999999997   4578999999999999999999999999965  999999999974


Q ss_pred             c--C---------------CCCC--------CccccccceeeeeccCCCc---cc--ccccccccccccc----------
Q 013297          151 Y--A---------------EGPA--------RPTGGAAAVVMLVGPDAPV---AF--ESKLRGSHMSHAY----------  190 (446)
Q Consensus       151 y--~---------------~~~~--------~~t~GdGAvA~Ll~~~~~~---~~--~~~~~g~~~~~~~----------  190 (446)
                      .  .               +.+.        ..+|||||+|+||++.+.-   .+  .....+++..+..          
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~g~~~~  235 (378)
T PRK06816        156 RWFRASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLENKPRPDGLSLRIDWIDLRSYAGELPVCMYAGAEKN  235 (378)
T ss_pred             hhhhhhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEEecCCCCCceEEEEEEeeecccccCccceecCCccC
Confidence            2  1               1111        1268999999999986531   11  1101112211110          


Q ss_pred             -----cccccCCCCCCcccCC--------hhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHH
Q 013297          191 -----DFYKPNLASEYPVVDG--------KLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKS  257 (446)
Q Consensus       191 -----df~~p~~~~~~p~~dG--------~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~  257 (446)
                           ..|++.. .+.+..+|        +.....+...+.+.+++++++.      +++++|||+|++||+|.+|++.+
T Consensus       236 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~------gl~~~DId~~v~Hq~n~~~~~~v  308 (378)
T PRK06816        236 EDGSLKGWSDYP-PEEAEAASALSLKQDVRLLNENIVVYTIKPLLELVDKR------NLDPDDIDYFLPHYSSEYFREKI  308 (378)
T ss_pred             CCCCccCcccCC-HHHHHhccCchHHhHHHHHHHHhHHHHHHHHHHHHHHc------CCChhhCCEEeeCcccHHHHHHH
Confidence                 1122100 01111223        3333344444455666666654      89999999999999999999999


Q ss_pred             HHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHH
Q 013297          258 FARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALA  337 (446)
Q Consensus       258 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~  337 (446)
                      .++|--.                   -.|+|.++.+.         ++                .++||+++||+|++|.
T Consensus       309 ~~~l~~~-------------------~~gl~~~k~~~---------~~----------------~~~GNt~sAsipi~L~  344 (378)
T PRK06816        309 VELLAKA-------------------GFMIPEEKWFT---------NL----------------ATVGNTGSASIYIMLD  344 (378)
T ss_pred             HHHHHhc-------------------cCCCChhheEE---------ec----------------cccccccchHHHHHHH
Confidence            8877100                   01788776653         34                8999999999999999


Q ss_pred             HHHHhcCCCCCCCEEEEEEeccc-cceeeEEEEEe
Q 013297          338 SLIHNKHSELDGKRVVLFSYGSG-LTATMFSLKLS  371 (446)
Q Consensus       338 ~~l~~~~~~~~G~~vll~syGsG-~~~~~~~l~~~  371 (446)
                      +++++ +++++||+|+++++||| +..++++++|+
T Consensus       345 ~a~~~-g~~~~Gd~vl~~~~~s~~~~~~~~~~~~~  378 (378)
T PRK06816        345 ELLNS-GRLKPGQKILCFVPESGRFSTAFMLLTVV  378 (378)
T ss_pred             HHHHc-CCCCCCCEEEEEEecccchhheeEEEEEC
Confidence            99998 88999999999999986 99999999984

>PLN03169 chalcone synthase family protein; Provisional

Probab=100.00  E-value=1.2e-42  Score=355.24  Aligned_cols=310  Identities=16%  Similarity=0.172  Sum_probs=238.0

Q ss_pred             CceeEEeEEEEecCCccccHHHHHHhc----CCCcce-------e--EEeecceEEecCCC-------------------
Q 013297            2 AKNVGILAMDIYFPPTCVQQEALEAHD----GASKGK-------Y--TIGLGQECMAFCSE-------------------   49 (446)
Q Consensus         2 ~~~vgI~~i~~y~P~~~v~~~~l~~~~----g~~~~k-------~--~~Glg~r~~av~~~-------------------   49 (446)
                      |..+.|.+|++++|++.++|+++.+..    +.+..+       +  ++||.+|+++..++                   
T Consensus        19 ~~~~~I~gigt~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~~~r   98 (391)
T PLN03169         19 PGKATILALGKAFPSQLVPQEYLVDGYFRDTKCDDPALKEKLERLCKTTTVKTRYVVMSKEILDKYPELATEGTPTIKQR   98 (391)
T ss_pred             CCCeEEEEEEeeCCCeecCHHHHHHHHHHHhcccCHHHHHHHHHHHHhCCcceeeEeccccchhhCccccccCCCCHHHH
Confidence            467899999999999999999998752    212221       2  37999999875321                   


Q ss_pred             ----CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCc-eeeeeCCcChhHHHHH
Q 013297           50 ----VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDI-EGVDSTNACYGGTAAL  124 (446)
Q Consensus        50 ----~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~-~~~di~~aC~gg~~AL  124 (446)
                          +|.+.+||++|+++||+++|++++|||+||++|++ ++..|+++.+|+++||+  .+.+ +++|+++||+|+++||
T Consensus        99 ~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t-~~~~P~~a~~l~~~LGl--~~~~~~~~d~~~gC~g~~~aL  175 (391)
T PLN03169         99 LDIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSS-EARLPGGDLYLAKQLGL--SPDVQRVMLYFLGCSGGVAGL  175 (391)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcC-CCCCCcHHHHHHHHhCc--CCcceeeecccChhHHHHHHH
Confidence                57789999999999999999999999999999986 67799999999999998  5565 5899999999999999


Q ss_pred             HHHHHHHHcCCCCCCEEEEEEeecCcc--C---C--CC---CCccccccceeeeeccCCCcccccccccccccccccccc
Q 013297          125 FNCVNWVESSSWDGRYGLVVCTDSAVY--A---E--GP---ARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYK  194 (446)
Q Consensus       125 ~~A~~~l~sg~~~~~~aLVVasD~~~y--~---~--~~---~~~t~GdGAvA~Ll~~~~~~~~~~~~~g~~~~~~~df~~  194 (446)
                      .+|..|++++.  .++||||++|.++.  .   .  ..   ...+|||||+|+||++++....+......+... .+ +.
T Consensus       176 ~~A~~~~~~~~--~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~l~~~~-~~-~i  251 (391)
T PLN03169        176 RVAKDIAENNP--GSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPIPVSESPFFELHTAI-QQ-FL  251 (391)
T ss_pred             HHHHHHHHhCC--CCeEEEEEEEcChhhccCCCccchhhhhhhhhccCceEEEEEecCCCcccCCcceEEEeee-ee-Ec
Confidence            99999999994  49999999999743  1   1  11   246799999999999865310000000000000 01 11


Q ss_pred             cCCC---------CCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCCc--eeeccCcchHHHHHHHHHhhh
Q 013297          195 PNLA---------SEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNAD--YFVFHSPYNKLVQKSFARLLF  263 (446)
Q Consensus       195 p~~~---------~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~did--~~i~H~p~~~~~~~~~~~l~~  263 (446)
                      |...         ..+..++|+..++...+.++.++++++++.      +++.+|+|  +|++||++.+|++.+.++|  
T Consensus       252 p~~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~~L~~~------gl~~~did~~~~v~Hq~n~~il~~v~~~L--  323 (391)
T PLN03169        252 PGTEKTIDGRLTEEGINFKLGRELPQKIEDNIEGFCKKLMKKA------GLVEKDYNDLFWAVHPGGPAILNRLEKKL--  323 (391)
T ss_pred             CCCccccCceecCCceEEEECcHHHHHHHHHHHHHHHHHHHHc------CCCCCCCCcceEEecCCCHHHHHHHHHHc--
Confidence            2110         012234677777777788888888888876      78888899  9999999999999999988  


Q ss_pred             hhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhc
Q 013297          264 NDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNK  343 (446)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~  343 (446)
                                            |++.++..                      +|+...+++|||+|||+++.|..++++ 
T Consensus       324 ----------------------gl~~ek~~----------------------~s~~~l~~~GNtsSasip~~L~~~~~~-  358 (391)
T PLN03169        324 ----------------------KLAPEKLE----------------------CSRRALMDYGNVSSNTIVYVLEYMREE-  358 (391)
T ss_pred             ----------------------CCCHHHHH----------------------HHHHHHHHhCCchHhHHHHHHHHHHHh-
Confidence                                  88876532                      111122899999999999999999877 


Q ss_pred             CCCC---CCCEEEEEEeccccceeeEEEEEe
Q 013297          344 HSEL---DGKRVVLFSYGSGLTATMFSLKLS  371 (446)
Q Consensus       344 ~~~~---~G~~vll~syGsG~~~~~~~l~~~  371 (446)
                      ++++   +|++++|++||+|+++++.+++|.
T Consensus       359 ~~~~~~~~gd~~ll~afG~G~s~~~~ll~~~  389 (391)
T PLN03169        359 LKKKGEEDEEWGLILAFGPGITFEGILARNL  389 (391)
T ss_pred             hcccCCCCCcEEEEEEEcccHhHHHHHHhhh
Confidence            5543   689999999999999999998873

>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs

Probab=100.00  E-value=3.3e-42  Score=349.75  Aligned_cols=307  Identities=19%  Similarity=0.211  Sum_probs=234.8

Q ss_pred             eEEeEEEEecCCccccHHHHHHhcCC--Cc----------cee--EEeecceEEecCC-CC-------------------
Q 013297            5 VGILAMDIYFPPTCVQQEALEAHDGA--SK----------GKY--TIGLGQECMAFCS-EV-------------------   50 (446)
Q Consensus         5 vgI~~i~~y~P~~~v~~~~l~~~~g~--~~----------~k~--~~Glg~r~~av~~-~~-------------------   50 (446)
                      +.|.++++|+|++.++|+++.+..+.  +.          +++  ++||.+|++..+. ++                   
T Consensus         2 ~~I~~~~~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gI~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (361)
T cd00831           2 ATILAIGTAVPPHRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETYAPRPEMSPSLDERNDIA   81 (361)
T ss_pred             cEEEEEEEeCCCCcCCHHHhhHHHHhcCChhhhHHHHHHHHHHHhhcceeEEEEEecCchhhcCCccccCCCcCcchhhH
Confidence            68999999999999999999998652  11          333  4899999987642 11                   


Q ss_pred             -CCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeC-CcChhHHHHHHHHH
Q 013297           51 -EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST-NACYGGTAALFNCV  128 (446)
Q Consensus        51 -Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~-~aC~gg~~AL~~A~  128 (446)
                       |++.+|+++|++++|+++|+++++||+||++|+++ +..|+++.+|+++||+  .+++.++|++ +||+|++.||++|.
T Consensus        82 ~~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~-~~~P~~a~~i~~~lgl--~~~~~~~dv~~~~C~~~~~al~~A~  158 (361)
T cd00831          82 LEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTG-NPTPSLDAMLINRLGL--RPDVKRYNLGGMGCSAGAIALDLAK  158 (361)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCC-CCCCCHHHHHHHHhCC--CcccchhccccccchhHHHHHHHHH
Confidence             36899999999999999999999999999999987 6699999999999998  5679999998 89999999999999


Q ss_pred             HHHHcCCCCCCEEEEEEeecCcc--CCCC------CCccccccceeeeeccCCCccc----ccccccccccccccc----
Q 013297          129 NWVESSSWDGRYGLVVCTDSAVY--AEGP------ARPTGGAAAVVMLVGPDAPVAF----ESKLRGSHMSHAYDF----  192 (446)
Q Consensus       129 ~~l~sg~~~~~~aLVVasD~~~y--~~~~------~~~t~GdGAvA~Ll~~~~~~~~----~~~~~g~~~~~~~df----  192 (446)
                      ++++++.  .++||||++|..+.  ....      ...+|||||+|+||++++....    .....+++.....+.    
T Consensus       159 ~~~~~~~--~~~aLvv~~e~~s~~~~~~d~~~~~~~~~lfGDgaaA~ll~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  236 (361)
T cd00831         159 DLLEANP--GARVLVVSTELCSLWYRGPDHRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLLPDSEDAM  236 (361)
T ss_pred             HHHHHCC--CCEEEEEEeecccceeCCCCcHHHhhhhhhccCCceEEEEEcCCCcccccccceeeecccceeeecCCCce
Confidence            9999995  49999999999743  2111      2467999999999998764210    011222222111110    


Q ss_pred             -cccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhcccccc
Q 013297          193 -YKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNAS  271 (446)
Q Consensus       193 -~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~  271 (446)
                       |++.. ..+....++.....+.+.+.++++.++++..    .+++.+|||+|++||++.++++.+.++|          
T Consensus       237 ~~~~~~-~~~~~~~~~~v~~~~~~~~~~~i~~~L~~~~----~g~~~~did~~~~H~~~~~i~~~v~~~l----------  301 (361)
T cd00831         237 GWHLGE-EGLTFVLSRDVPRLVEKNLERVLRKLLARLG----IGLFKLAFDHWCVHPGGRAVLDAVEKAL----------  301 (361)
T ss_pred             EEEEEc-ceEEEEeChhHHHHHHHHHHHHHHHHhcccc----CCCccccceEEEECCCChHHHHHHHHHc----------
Confidence             11110 1112233344445556677777777776531    1688899999999999999999998887          


Q ss_pred             chhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCE
Q 013297          272 SVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKR  351 (446)
Q Consensus       272 ~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~  351 (446)
                                    |++.++..                      +|+.+.+++|||++||+|++|.+++++ +++++|++
T Consensus       302 --------------gl~~~~~~----------------------~s~~~l~~~GN~~sasi~~~L~~~~~~-g~~~~Gd~  344 (361)
T cd00831         302 --------------GLSPEDLE----------------------ASRMVLRRYGNMSSSSVLYVLAYMEAK-GRVKRGDR  344 (361)
T ss_pred             --------------CCCHHHHH----------------------HHHHHHHHhCCchhccHHHHHHHHHHh-CCCCCCCE
Confidence                          78765432                      112223899999999999999999998 78889999


Q ss_pred             EEEEEeccccceeeEEE
Q 013297          352 VVLFSYGSGLTATMFSL  368 (446)
Q Consensus       352 vll~syGsG~~~~~~~l  368 (446)
                      |++++||+|++++++++
T Consensus       345 vll~~~G~G~s~~~~l~  361 (361)
T cd00831         345 GLLIAFGPGFTCESAVW  361 (361)
T ss_pred             EEEEEEcCCceeeeeeC
Confidence            99999999999998764

PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.

>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes

Probab=100.00  E-value=1.3e-39  Score=325.38  Aligned_cols=304  Identities=37%  Similarity=0.514  Sum_probs=235.9

Q ss_pred             eeEEeEEEEecCCccccHHHHHHhcCCCcceeEEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEec
Q 013297            4 NVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSE   83 (446)
Q Consensus         4 ~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~   83 (446)
                      .|+|.++++|+|+++++++++++..+.+.-+..+|+.+|++.  .++++..+|+.+|++++|+++|+++++||.||++++
T Consensus         1 ~v~I~~i~~~lP~~~v~~~~~~~~~~~~~~~~~~gi~~r~~~--~~~~~~~~l~~~a~~~aL~~ag~~~~~Id~li~~~~   78 (324)
T cd00827           1 DVGIEAIGAYLPRYRVDNEELAEGLGVDPGKYTTGIGQRHMA--GDDEDVPTMAVEAARRALERAGIDPDDIGLLIVATE   78 (324)
T ss_pred             CccEEEEEecCCceeecHHHHHHHhCCCcceeeeecceeEec--CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence            479999999999999999999999887633345799999866  568999999999999999999999999999999999


Q ss_pred             cCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCccC---CCCCCccc
Q 013297           84 TVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYA---EGPARPTG  160 (446)
Q Consensus        84 t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~---~~~~~~t~  160 (446)
                      ++.+..|+.+.+|++.||+   +++.++++.++|+|++.||..|..+|++|..  +++|||++|..+..   ......++
T Consensus        79 ~~~~~~~~~~~~i~~~lg~---~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~--~~vlvv~~e~~~~~~~~~~~~~~~~  153 (324)
T cd00827          79 SPIDKGKSAATYLAELLGL---TNAEAFDLKQACYGGTAALQLAANLVESGPW--RYALVVASDIASYLLDEGSALEPTL  153 (324)
T ss_pred             CCCCCCccHHHHHHHHcCC---CCCceeehhhhhHHHHHHHHHHHHHHHcCCC--CEEEEEEEHHhhhcccCCCCccccc
Confidence            9887788999999999997   4889999999999999999999999999966  99999999998542   23456889


Q ss_pred             cccceeeeeccCCC---cccccccccccccc------cccccccCC----CCCCcccCC--hhHHHHHHHHHHHHHHHHH
Q 013297          161 GAAAVVMLVGPDAP---VAFESKLRGSHMSH------AYDFYKPNL----ASEYPVVDG--KLSQTCYLMALDTCYKCLC  225 (446)
Q Consensus       161 GdGAvA~Ll~~~~~---~~~~~~~~g~~~~~------~~df~~p~~----~~~~p~~dG--~~s~~~yl~~l~~~~~~~~  225 (446)
                      ||||+|+||++++.   ..+......+....      ..++..+.+    .......++  +.....+.+.+.++++..+
T Consensus       154 gdgaaA~ll~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  233 (324)
T cd00827         154 GDGAAAMLVSRNPGILAAGIVSTHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAKVVRKAL  233 (324)
T ss_pred             cCceEEEEEecCcccccCCceeeeeecccccccCccceeccCCCcchhhhhhcceeecCCccchHHHHhHHHHHHHHHHH
Confidence            99999999999864   22221111111110      111111100    000011233  2333455566777777777


Q ss_pred             HHhhhhhCCCCCcCCCceeeccCcch-HHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHh
Q 013297          226 SKYEKLEGKQFSLSNADYFVFHSPYN-KLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQ  304 (446)
Q Consensus       226 ~~~~~~~~~~~~~~did~~i~H~p~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~  304 (446)
                      ++.      +++ +||++|++||++. ++++.+.++|                        +++.++...++.     .+
T Consensus       234 ~~~------~~~-~~i~~~~~h~~~~~~~~~~~~~~l------------------------~~~~~~~~~~~~-----~~  277 (324)
T cd00827         234 DRA------GLS-EDIDYFVPHQPNGKKILEAVAKKL------------------------GGPPEKASQTRW-----IL  277 (324)
T ss_pred             HHc------ccc-cccceeeccCchHHHHHHHHHHHc------------------------cchHhhhccchh-----hH
Confidence            665      677 9999999999999 9999998887                        555444332110     12


Q ss_pred             hhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEE
Q 013297          305 LAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFS  367 (446)
Q Consensus       305 ~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~  367 (446)
                      +                +++||+++||++++|.+++++ +++.+||+|+++|+|+|+++++++
T Consensus       278 ~----------------~~~Gn~~sa~~~~~L~~~~~~-~~~~~Gd~vl~~~~G~G~~~~~~~  323 (324)
T cd00827         278 L----------------RRVGNMYAASILLGLASLLES-GKLKAGDRVLLFSYGSGFTAEAFV  323 (324)
T ss_pred             H----------------HHhCchHHHHHHHHHHHHHhc-CCCCCCCEEEEEEeccchhheecc
Confidence            3                899999999999999999998 778899999999999999998875

They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.

>PLN03171 chalcone synthase-like protein; Provisional

Probab=100.00  E-value=1.4e-39  Score=333.30  Aligned_cols=311  Identities=19%  Similarity=0.232  Sum_probs=224.4

Q ss_pred             eeEEeEEEEecCCccccHHHHHHhc-C--CCcc---------ee--EEeecceEEecCCC--------------------
Q 013297            4 NVGILAMDIYFPPTCVQQEALEAHD-G--ASKG---------KY--TIGLGQECMAFCSE--------------------   49 (446)
Q Consensus         4 ~vgI~~i~~y~P~~~v~~~~l~~~~-g--~~~~---------k~--~~Glg~r~~av~~~--------------------   49 (446)
                      .+.|.++++|+|+++++|+++++.. .  .+.+         ++  ++||.+|+++..+.                    
T Consensus        22 ~~~I~gigt~~P~~~v~n~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~~~r~  101 (399)
T PLN03171         22 LAAVLAIGTANPANCVPQDEFPDFYFRATKSDHLTALKDKFKRICQELGVQKRYLHHTEELLSAHPEFLDHDAPSLDARL  101 (399)
T ss_pred             CcEEEEEEeeCCCcccCHHHHHHHHHHHhcccccHHHHHHHHHHHHhcCCCceeEeccccccccCccccccCCCCHHHHH
Confidence            4789999999999999999998873 2  1222         23  57999999764320                    


Q ss_pred             ---CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCc-eeeeeCCcChhHHHHHH
Q 013297           50 ---VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDI-EGVDSTNACYGGTAALF  125 (446)
Q Consensus        50 ---~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~-~~~di~~aC~gg~~AL~  125 (446)
                         .|.+.+||++|++++|+++|++++|||+||++|+|+++ .|+++.+|+++||+  ...+ +++++.+||+|+++||+
T Consensus       102 ~~~~~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~-~P~~a~~v~~~LGl--~~~~~~~~~~~~gC~g~~~aL~  178 (399)
T PLN03171        102 DIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAH-IPGVDFRLVPLLGL--RPSVRRTMLHLNGCFAGAAALR  178 (399)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCC-CCchHHHHHHHhCC--CcccceeeccCCccHHHHHHHH
Confidence               04799999999999999999999999999999999986 89999999999998  4444 36788889999999999


Q ss_pred             HHHHHHHcCCCCCCEEEEEEeecCcc-CCCCC---------CccccccceeeeeccCCCcc--ccccccccccc---c--
Q 013297          126 NCVNWVESSSWDGRYGLVVCTDSAVY-AEGPA---------RPTGGAAAVVMLVGPDAPVA--FESKLRGSHMS---H--  188 (446)
Q Consensus       126 ~A~~~l~sg~~~~~~aLVVasD~~~y-~~~~~---------~~t~GdGAvA~Ll~~~~~~~--~~~~~~g~~~~---~--  188 (446)
                      +|.+|++++..  ++||||++|.++. .++++         ..+|||||+|+||++.+...  -...+....+.   +  
T Consensus       179 ~A~~li~~~~~--~~vLVv~~e~~s~~~~~~d~~~~~~~v~~~LFGDGAaA~vl~~~~~~~~~~~~~l~~~~~~~~p~~~  256 (399)
T PLN03171        179 LAKDLAENNRG--ARVLVVAAEITLLLFNGPDEGCFQTLLNQGLFGDGAAAVIVGADADAAERPLFEIVSAAQAIIPESD  256 (399)
T ss_pred             HHHHHHHhCCC--CeEEEEEEeccccccCCCCcccHHhhhccccccCccEEEEEecCCCCCCCCceEEEEeeeEEecCCc
Confidence            99999999954  9999999999742 22222         25899999999999865310  00011111110   0  


Q ss_pred             -cccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhh---hhCCCCCcCCCceeeccCcchHHHHHHHHHhhhh
Q 013297          189 -AYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEK---LEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFN  264 (446)
Q Consensus       189 -~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~---~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~  264 (446)
                       ...+..+.++     .+++++.....+.+.+.++.++++...   ....+++.+|++|+ +||++.+|++.+.++|   
T Consensus       257 ~~~~~~~~~~g-----~~~~~~~~~vp~~i~~~l~~~l~~~l~~~~~~~~g~~~~di~~~-~Hq~~~~il~~v~~~L---  327 (399)
T PLN03171        257 DAINMHFTEGG-----LDGNIGTRQVPGLIGDNIERCLLDAFAPLLGGDGGAEWNDLFWA-VHPGSSAILDQVDAAL---  327 (399)
T ss_pred             hheEEEEEcCC-----ceEEECchhHHHHHHHHHHHHHHHHHHhhcccccCCCcccceEE-EcCCcHHHHHHHHHHc---
Confidence             1111111211     123333222223333333443333210   01235677899887 5999999999999988   


Q ss_pred             hccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcC
Q 013297          265 DFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKH  344 (446)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~  344 (446)
                                           |++.++....      ..++                ++||||++||++++|..++++ +
T Consensus       328 ---------------------gl~~ek~~~s------~~~l----------------~~yGNtssaSip~~L~~~~~~-~  363 (399)
T PLN03171        328 ---------------------GLEPEKLAAS------RRVL----------------SDYGNMFGATVIFALDELRRQ-M  363 (399)
T ss_pred             ---------------------CCCHHHhHHH------HHHH----------------HHhCcchhhhHHHHHHHHHhh-H
Confidence                                 8887654210      0123                899999999999999999987 4


Q ss_pred             C--CCCC---CEEEEEEeccccceeeEEEEEeC
Q 013297          345 S--ELDG---KRVVLFSYGSGLTATMFSLKLSE  372 (446)
Q Consensus       345 ~--~~~G---~~vll~syGsG~~~~~~~l~~~~  372 (446)
                      +  +.+|   ++|+|++||+|++|++++++|..
T Consensus       364 ~~~~~~G~~~d~vll~~fG~Glt~~~~ll~~~~  396 (399)
T PLN03171        364 EEAAAAGAWPELGVMMAFGPGLTVDAMLLHASG  396 (399)
T ss_pred             hhcCCCCCCcceEEEEEEcccHHHHHHHhhccc
Confidence            3  4677   99999999999999999999864

>PLN03172 chalcone synthase family protein; Provisional

Probab=100.00  E-value=1.3e-38  Score=324.93  Aligned_cols=308  Identities=17%  Similarity=0.228  Sum_probs=227.7

Q ss_pred             eEEeEEEEecCCccccHHHHHHhcC----C-C-c--c-ee-----EEeecceEEecCCC--C------------------
Q 013297            5 VGILAMDIYFPPTCVQQEALEAHDG----A-S-K--G-KY-----TIGLGQECMAFCSE--V------------------   50 (446)
Q Consensus         5 vgI~~i~~y~P~~~v~~~~l~~~~g----~-~-~--~-k~-----~~Glg~r~~av~~~--~------------------   50 (446)
                      +.|.+||+.+|++.++|+++.++..    . + +  + ++     .+||..|++.+.+.  +                  
T Consensus        17 ~~I~~igta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r~~   96 (393)
T PLN03172         17 ATILAIGKATPANCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLDARQD   96 (393)
T ss_pred             eEEEEEEecCCCccccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhCccccccCCCCHHHHHH
Confidence            6799999999999999999877652    1 1 1  1 12     48999999876210  0                  


Q ss_pred             ---CCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCce-eeeeCCcChhHHHHHHH
Q 013297           51 ---EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIE-GVDSTNACYGGTAALFN  126 (446)
Q Consensus        51 ---Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~-~~di~~aC~gg~~AL~~  126 (446)
                         +...+||++|+++||+++|++++|||+||++|+|+.+ .|+++.+|+++||+  .+.+. .++++.||+|++.||++
T Consensus        97 ~~~~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~-~P~~a~~l~~~LGl--~~~~~~~~~~~~gC~g~~~aL~~  173 (393)
T PLN03172         97 MVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVD-MPGADYQLTKLLGL--KPSVKRFMMYQQGCFAGGTVLRL  173 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCc-CchHHHHHHHHhCC--CCCceEEeeeCCchHHHHHHHHH
Confidence               1256999999999999999999999999999999976 89999999999998  56664 57889999999999999


Q ss_pred             HHHHHHcCCCCCCEEEEEEeecCc--cCCC--C------CCccccccceeeeeccCCCcccc-c--cccccc------cc
Q 013297          127 CVNWVESSSWDGRYGLVVCTDSAV--YAEG--P------ARPTGGAAAVVMLVGPDAPVAFE-S--KLRGSH------MS  187 (446)
Q Consensus       127 A~~~l~sg~~~~~~aLVVasD~~~--y~~~--~------~~~t~GdGAvA~Ll~~~~~~~~~-~--~~~g~~------~~  187 (446)
                      |.++++++  ++++||||++|.++  +.+.  .      ...+|||||+|+||++++...++ +  .+.++.      +.
T Consensus       174 A~~~~~~~--~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvVl~~~~~~~~~~~~~~i~~~~~~~~~~t~  251 (393)
T PLN03172        174 AKDLAENN--AGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKIERPLFEIVSAAQTILPDSD  251 (393)
T ss_pred             HHHHHHcC--CCCeEEEEEEehhhhhhcccccccHHhhhccchhcCceEEEEEecCCCCcccCceeEEeeeccEEecCCc
Confidence            99999999  55999999999985  2221  1      23679999999999986431100 0  122221      11


Q ss_pred             ccccc-cccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhc
Q 013297          188 HAYDF-YKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDF  266 (446)
Q Consensus       188 ~~~df-~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~  266 (446)
                      +.+.+ .+.. +..+ ... +.......+.++.++++++++.      +++..|+++|++||++.++++.+.++|     
T Consensus       252 ~~~~~~i~~~-G~~~-~l~-~~vp~~~~~~i~~~~~~~L~~~------gl~~~di~~~~~Hqgg~~Il~~v~~~L-----  317 (393)
T PLN03172        252 GAIDGHLREV-GLTF-HLL-KDVPGLISKNIEKSLVEAFAPI------GINDWNSIFWIAHPGGPAILDQVEIKL-----  317 (393)
T ss_pred             ccccceEEcC-CcEE-EEe-chHHHHHHHHHHHHHHHHhhhc------CCCccccceEEecCCcHHHHHHHHHHc-----
Confidence            11111 1111 1110 011 3333334456666777666654      778899999999999999999999998     


Q ss_pred             cccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHh---c
Q 013297          267 MRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHN---K  343 (446)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~---~  343 (446)
                                         |++.++.                      .+|+.+.++||||+|+|+++.|..+++.   .
T Consensus       318 -------------------gl~~~~~----------------------~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~  356 (393)
T PLN03172        318 -------------------DLKEEKL----------------------RATRHVLSDYGNMSSACVLFILDEMRKKSIEE  356 (393)
T ss_pred             -------------------CCCHHHH----------------------HHHHHHHHHhCccHHhHHHHHHHHHHhhhhhc
Confidence                               7776543                      2222334899999999999999998742   1


Q ss_pred             CCCCCC---CEEEEEEeccccceeeEEEEEeC
Q 013297          344 HSELDG---KRVVLFSYGSGLTATMFSLKLSE  372 (446)
Q Consensus       344 ~~~~~G---~~vll~syGsG~~~~~~~l~~~~  372 (446)
                      +++++|   +++++++||+|+++++++++|.+
T Consensus       357 g~~~~G~~~~~~ll~afGpG~t~~~~ll~~~~  388 (393)
T PLN03172        357 GKGSTGEGLEWGVLFGFGPGLTVETVVLHSVP  388 (393)
T ss_pred             CCCCCCCCcceEEEEEeCCcceeeeeeeEecc
Confidence            455555   89999999999999999999954

>PLN03168 chalcone synthase; Provisional

Probab=100.00  E-value=1.5e-38  Score=324.60  Aligned_cols=308  Identities=17%  Similarity=0.204  Sum_probs=222.4

Q ss_pred             eeEEeEEEEecCCccccHHHHHHhcCC------Cc---cee-----EEeecceEEecCCC--------------------
Q 013297            4 NVGILAMDIYFPPTCVQQEALEAHDGA------SK---GKY-----TIGLGQECMAFCSE--------------------   49 (446)
Q Consensus         4 ~vgI~~i~~y~P~~~v~~~~l~~~~g~------~~---~k~-----~~Glg~r~~av~~~--------------------   49 (446)
                      ...|.+|++..|+++++|+++.++...      .+   .|+     ++||.+|++.+++.                    
T Consensus        15 ~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~ps~~~r~   94 (389)
T PLN03168         15 PACVLGIGTAVPPAEFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEVLKANPGICTYMEPSLNVRH   94 (389)
T ss_pred             CeEEEEEeccCCCcccCHHHHHHHHHHhccccCcHHHHHHHHHHHHhcCCCeeeeeccccchhhCcccccccCCCHHHHH
Confidence            367999999999999999998776521      11   122     47999999876321                    


Q ss_pred             ---CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCc-eeeeeCCcChhHHHHHH
Q 013297           50 ---VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDI-EGVDSTNACYGGTAALF  125 (446)
Q Consensus        50 ---~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~-~~~di~~aC~gg~~AL~  125 (446)
                         .+.+.+||++|+++||+++|++++|||+||++|+|+. ..|+++.+|+++||+  .+.+ +++|++.||+||++||.
T Consensus        95 ~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~-~~Ps~a~~l~~~LGl--~~~~~r~~d~~~gC~g~~~aL~  171 (389)
T PLN03168         95 DIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGV-NMPGADHALAKLLGL--KPTVKRVMMYQTGCFGGASVLR  171 (389)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCC-CCccHHHHHHHHhCc--CCcceeeeeeCCccHHHHHHHH
Confidence               0247899999999999999999999999999999995 489999999999998  4554 58999999999999999


Q ss_pred             HHHHHHHcCCCCCCEEEEEEeecCcc--CCC--------CCCccccccceeeeeccCCCccccccccccccccccccccc
Q 013297          126 NCVNWVESSSWDGRYGLVVCTDSAVY--AEG--------PARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKP  195 (446)
Q Consensus       126 ~A~~~l~sg~~~~~~aLVVasD~~~y--~~~--------~~~~t~GdGAvA~Ll~~~~~~~~~~~~~g~~~~~~~df~~p  195 (446)
                      +|.++++++  ++++||||++|.++.  .+.        ....+|||||+|+||++++.-..+.+........  ....|
T Consensus       172 ~A~~~i~~~--~~~~VLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvvl~~~~~~~~~~~~~~~~~~~--~~~~p  247 (389)
T PLN03168        172 VAKDLAENN--KGARVLAVASEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPKPEVEKALFEVHWAG--ETILP  247 (389)
T ss_pred             HHHHHHHhC--CCCEEEEEEEehhhhhccCcccccHHHHhccccccCccEEEEEecCCCCccCCcceEEEeee--eEEEc
Confidence            999999999  559999999999843  211        1236799999999999864311011111111100  01112


Q ss_pred             CCCC--CCcc-cCC------hhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhc
Q 013297          196 NLAS--EYPV-VDG------KLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDF  266 (446)
Q Consensus       196 ~~~~--~~p~-~dG------~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~  266 (446)
                      +...  .+.+ ..|      +.......+.++.+++++++..      +....|+++|++||++.++++.+.++|     
T Consensus       248 ~s~~~~~~~~~~~g~~~~l~~~vp~~i~~~~~~~l~~~l~~~------~~~~~d~~~~v~Hqgg~~Il~~v~~~L-----  316 (389)
T PLN03168        248 ESDGAIDGHLTEAGLIFHLMKDVPGLISKNIEKFLNEARKCV------GSPDWNEMFWAVHPGGPAILDQVEAKL-----  316 (389)
T ss_pred             CCCCccCceEecCceEEEECHHHHHHHHHHHHHHHHHHHHhc------CCCccccceEEecCCcHHHHHHHHHHc-----
Confidence            1000  0001 111      1122223344555555555543      455567889999999999999999998     


Q ss_pred             cccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCC
Q 013297          267 MRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSE  346 (446)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~  346 (446)
                                         |++.++...                      |+.+.+++|||+|||+++.|..++++  ++
T Consensus       317 -------------------gl~~ek~~~----------------------s~~vl~~yGNtSSaSv~~vL~~~~~~--~~  353 (389)
T PLN03168        317 -------------------KLTKDKMQG----------------------SRDILSEFGNMSSASVLFVLDQIRQR--SV  353 (389)
T ss_pred             -------------------CCCHHHHHH----------------------HHHHHHHhCccHhhhHHHHHHHHHHH--Hh
Confidence                               888765421                      11223899999999999999998764  22


Q ss_pred             CC--------CCEEEEEEeccccceeeEEEEEeC
Q 013297          347 LD--------GKRVVLFSYGSGLTATMFSLKLSE  372 (446)
Q Consensus       347 ~~--------G~~vll~syGsG~~~~~~~l~~~~  372 (446)
                      ++        |++++|++||+|+++++++++|..
T Consensus       354 ~~g~~~~~~g~~~~ll~afGpG~t~~~~llr~~~  387 (389)
T PLN03168        354 KMGASTLGEGSEFGFFIGFGPGLTLEVLVLRAAA  387 (389)
T ss_pred             hcCCCCCCCCccEEEEEEEcchhhhhhhhheecc
Confidence            22        389999999999999999999964

>PLN03170 chalcone synthase; Provisional

Probab=100.00  E-value=2.3e-38  Score=324.14  Aligned_cols=307  Identities=17%  Similarity=0.234  Sum_probs=230.0

Q ss_pred             eEEeEEEEecCCccccHHHHHHhcCC-----C-c--c-ee-----EEeecceEEecCCC----C----------------
Q 013297            5 VGILAMDIYFPPTCVQQEALEAHDGA-----S-K--G-KY-----TIGLGQECMAFCSE----V----------------   50 (446)
Q Consensus         5 vgI~~i~~y~P~~~v~~~~l~~~~g~-----~-~--~-k~-----~~Glg~r~~av~~~----~----------------   50 (446)
                      ..|.+|++..|++.++|+++.++...     + +  . |+     +.||..|++.+.+.    +                
T Consensus        21 ~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r~~  100 (401)
T PLN03170         21 ATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLDARQD  100 (401)
T ss_pred             eEEEEEeecCCCccccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccCCCCHHHHHH
Confidence            67999999999999999998776521     1 1  1 22     48999999866210    0                


Q ss_pred             ---CCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCc-eeeeeCCcChhHHHHHHH
Q 013297           51 ---EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDI-EGVDSTNACYGGTAALFN  126 (446)
Q Consensus        51 ---Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~-~~~di~~aC~gg~~AL~~  126 (446)
                         +...+||++|+++||+++|++++|||+||++|+|+.+ .|+++.+|+++||+  .+.+ +++|++.||+|+++||.+
T Consensus       101 ~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~-~Ps~a~~l~~~LGl--~~~~~r~~d~~~gC~G~~~aL~~  177 (401)
T PLN03170        101 IVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVD-MPGADYQLTKMLGL--RPSVNRLMMYQQGCFAGGTVLRV  177 (401)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCC-CChHHHHHHHHhCc--CcccHHHHhhcChhHHHHHHHHH
Confidence               2357799999999999999999999999999999966 99999999999998  5555 589999999999999999


Q ss_pred             HHHHHHcCCCCCCEEEEEEeecCc--cCCCC--------CCccccccceeeeeccCCCccccc---cccccccccccccc
Q 013297          127 CVNWVESSSWDGRYGLVVCTDSAV--YAEGP--------ARPTGGAAAVVMLVGPDAPVAFES---KLRGSHMSHAYDFY  193 (446)
Q Consensus       127 A~~~l~sg~~~~~~aLVVasD~~~--y~~~~--------~~~t~GdGAvA~Ll~~~~~~~~~~---~~~g~~~~~~~df~  193 (446)
                      |.++++++  ++++||||++|+++  +.+..        ...+|||||+|+||++++.-.+..   .+....     ...
T Consensus       178 A~~l~~~~--~~~~vLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvVl~~~~~~~~~~~~~~l~~~~-----~~~  250 (401)
T PLN03170        178 AKDLAENN--RGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPLFQLVSAS-----QTI  250 (401)
T ss_pred             HHHHHHcC--CCCeEEEEEEehhhhccCCcccchhhhhhhhhhhhceeEEEEEecCCcccccCCceEEeecc-----ceE
Confidence            99999999  55999999999974  21111        136799999999999865311110   011110     011


Q ss_pred             ccCCCC--CCc-ccCC------hhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhh
Q 013297          194 KPNLAS--EYP-VVDG------KLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFN  264 (446)
Q Consensus       194 ~p~~~~--~~p-~~dG------~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~  264 (446)
                      .|+...  .+. ..+|      +.......+.++.++++++++.      ++..+|+++|++||++.++++.+.++|   
T Consensus       251 ~p~~~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~v~~~L~~~------gl~~~di~~~v~Hqgg~~il~~v~~~L---  321 (401)
T PLN03170        251 LPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPL------GITDYNSIFWVAHPGGPAILDQVEAKV---  321 (401)
T ss_pred             ecCCcccccceEEcCCeEEEEehHHHHHHHHHHHHHHHHHHHhc------CCCccccCeEEecCCcHHHHHHHHHHc---
Confidence            121100  000 1122      3333444566777777777765      788899999999999999999999988   


Q ss_pred             hccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHH---
Q 013297          265 DFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIH---  341 (446)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~---  341 (446)
                                           |++.++.                      .+|+.+.++||||+|+|+++.|..+++   
T Consensus       322 ---------------------gl~~~~~----------------------~~s~~~l~~~GNtsSasv~~vL~~~~~~~~  358 (401)
T PLN03170        322 ---------------------GLEKERM----------------------RATRHVLSEYGNMSSACVLFILDEMRKRSA  358 (401)
T ss_pred             ---------------------CCChHHH----------------------HHHHHHHHHhCccHHhHHHHHHHHHHHhHh
Confidence                                 7876543                      222233489999999999999999984   


Q ss_pred             hcCCCCCC---CEEEEEEeccccceeeEEEEEeCC
Q 013297          342 NKHSELDG---KRVVLFSYGSGLTATMFSLKLSEG  373 (446)
Q Consensus       342 ~~~~~~~G---~~vll~syGsG~~~~~~~l~~~~~  373 (446)
                      +.+++.+|   ++++|++||+|+++++++++|.+.
T Consensus       359 ~~g~~~~G~~~~~~ll~afGpG~t~~~~ll~~~~~  393 (401)
T PLN03170        359 EDGQATTGEGFDWGVLFGFGPGLTVETVVLHSVPI  393 (401)
T ss_pred             hcCCCCCCCCccEEEEEEeCchHhHHhHHheeccc
Confidence            12566677   899999999999999999999663

>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=100.00  E-value=1.1e-37  Score=317.73  Aligned_cols=303  Identities=16%  Similarity=0.130  Sum_probs=228.8

Q ss_pred             eeEEeEEEEecCCccccHHHHHHhcC------------------------CCccee--EEeecceEEecCC---------
Q 013297            4 NVGILAMDIYFPPTCVQQEALEAHDG------------------------ASKGKY--TIGLGQECMAFCS---------   48 (446)
Q Consensus         4 ~vgI~~i~~y~P~~~v~~~~l~~~~g------------------------~~~~k~--~~Glg~r~~av~~---------   48 (446)
                      +|+|.++++|+|++.|+|+++++..+                        .+.+++  ++|+..|+++...         
T Consensus         2 ~~~I~~~g~~lP~~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~   81 (372)
T PRK07515          2 NVVISGTGLYTPPESISNEELVASFNAYVERFNAENAAAIAAGEVEALQPSSSEFIEKASGIKSRYVMDKEGILDPDRMR   81 (372)
T ss_pred             CcEEEEEEeecCCccccHHHHHHHHhhhhhhhcccchhhhccccccccCCCCHHHhhhccCCceEEEecccccCcccccC
Confidence            68999999999999999999987632                        123344  4799999876421         


Q ss_pred             -------CC--CCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChh
Q 013297           49 -------EV--EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYG  119 (446)
Q Consensus        49 -------~~--Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~g  119 (446)
                             ..  ....+|++.|++++|+++|+++++||.||++|+++.+..|+.+..|++.||+  .  +.+++++++|+|
T Consensus        82 ~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl--~--~~~~~v~~aCas  157 (372)
T PRK07515         82 PRIPERSNDELSIQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGI--E--GFAFDMNVACSS  157 (372)
T ss_pred             cccccccccchhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCC--C--CcEEEecchhHH
Confidence                   01  1356899999999999999999999999999998888899999999999997  2  578999999999


Q ss_pred             HHHHHHHHHHHHHcCCCCCCEEEEEEeecCc-cCC---CCCCccccccceeeeeccCCCcc--cccccccccc-cccccc
Q 013297          120 GTAALFNCVNWVESSSWDGRYGLVVCTDSAV-YAE---GPARPTGGAAAVVMLVGPDAPVA--FESKLRGSHM-SHAYDF  192 (446)
Q Consensus       120 g~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-y~~---~~~~~t~GdGAvA~Ll~~~~~~~--~~~~~~g~~~-~~~~df  192 (446)
                      ++.||..|..+|++|..  ++||||++|..+ +.+   .....+|||||+|+||++.+.-.  -...+.++.. .+..+.
T Consensus       158 g~~al~~A~~~i~~g~~--~~vLvv~~e~~s~~~~~~d~~~~~lfGDgAaA~vL~~~~~~~~~~~~~il~~~~~~~~~~~  235 (372)
T PRK07515        158 ATFGIQTAANAIRSGSA--RRVLVVNPEICSGHLNFRDRDSHFIFGDVATAVIVERADTATSAGGFEILGTRLFTQFSNN  235 (372)
T ss_pred             HHHHHHHHHHHHHcCCC--CEEEEEeeecccccccccCCCCCEEecCccEEEEEeeccccccCCCceEEEEEeecccccc
Confidence            99999999999999965  999999999874 222   22347799999999999864210  0001111111 000111


Q ss_pred             c----------ccCC---CCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHH
Q 013297          193 Y----------KPNL---ASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFA  259 (446)
Q Consensus       193 ~----------~p~~---~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~  259 (446)
                      +          .+..   ...+..++|...++.+.+.+.+++++++++.      +++++|||+|++||++.+|.+.+.+
T Consensus       236 ~~~~~G~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~------gl~~~dId~~~~Hq~~~~~~d~~~~  309 (372)
T PRK07515        236 IRNNFGFLNRADPEGIGARDKLFVQEGRKVFKEVCPMVAEHIVEHLAEN------GLTPADVKRFWLHQANINMNQLIGK  309 (372)
T ss_pred             eecCCCCCCCCCccccccccceEEeccHHHHHHHHHHHHHHHHHHHHHc------CCCHHHCCEEEECCCCHHHHHHHHH
Confidence            1          1100   0001134777667777788888888888876      8999999999999999999999887


Q ss_pred             HhhhhhccccccchhhHhhhhcCCCCCCC--CCccccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHH
Q 013297          260 RLLFNDFMRNASSVDEAAKEKLGPFSTLS--GDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALA  337 (446)
Q Consensus       260 ~l~~~~~~~~~~~~~~~~~~~~~~~~g~~--~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~  337 (446)
                      +++                       |++  .++.         ..++                +++||+++||+|++|.
T Consensus       310 ~ll-----------------------g~~~~~~~~---------~~~~----------------~~~GNt~sasi~~~L~  341 (372)
T PRK07515        310 KVL-----------------------GRDATPEEA---------PVIL----------------DEYANTSSAGSIIAFH  341 (372)
T ss_pred             Hhc-----------------------cCCCChhhc---------eEeH----------------HhcCCchhhHHHHHHH
Confidence            742                       332  2221         1223                8999999999999999


Q ss_pred             HHHHhcCCCCCCCEEEEEEeccccceeeEEEE
Q 013297          338 SLIHNKHSELDGKRVVLFSYGSGLTATMFSLK  369 (446)
Q Consensus       338 ~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~  369 (446)
                      .++   +++.+||+|+|++||+|+++++++++
T Consensus       342 ~~~---~~~~~Gd~vll~~~G~G~~~~~~ll~  370 (372)
T PRK07515        342 KHS---DDLAAGDLGVICSFGAGYSIGSVIVR  370 (372)
T ss_pred             HHh---ccCCCCCEEEEEEecccHHHHHHHhc
Confidence            985   34689999999999999999988765

>PLN03173 chalcone synthase; Provisional

Probab=100.00  E-value=5.5e-38  Score=320.17  Aligned_cols=309  Identities=17%  Similarity=0.242  Sum_probs=228.7

Q ss_pred             eeEEeEEEEecCCccccHHHHHHhcC------CCcc---ee-----EEeecceEEecCCC----C---------------
Q 013297            4 NVGILAMDIYFPPTCVQQEALEAHDG------ASKG---KY-----TIGLGQECMAFCSE----V---------------   50 (446)
Q Consensus         4 ~vgI~~i~~y~P~~~v~~~~l~~~~g------~~~~---k~-----~~Glg~r~~av~~~----~---------------   50 (446)
                      .+.|.+|++..|+++++|+++.++..      ..+.   ++     ++||..|++.+++.    .               
T Consensus        16 ~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r~   95 (391)
T PLN03173         16 PATIMAIGTSTPPNCVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYMAPSLDARQ   95 (391)
T ss_pred             CeEEEEEEccCCCcccCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCcccccccCCCHHHHH
Confidence            36799999999999999999877652      1121   12     47999999876321    0               


Q ss_pred             ----CCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCc-eeeeeCCcChhHHHHHH
Q 013297           51 ----EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDI-EGVDSTNACYGGTAALF  125 (446)
Q Consensus        51 ----Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~-~~~di~~aC~gg~~AL~  125 (446)
                          +.+.+||++|+++||+++|++++|||+||++|+|+.+ .|+++.+|+++||+  .+.+ +.++++.||+|++.||+
T Consensus        96 ~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~-~P~~a~~l~~~LGl--~~~~~~~~~~~~gC~g~~~aL~  172 (391)
T PLN03173         96 DMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVD-MPGADYQLTKLLGL--RSSVKRFMMYQQGCFAGGTVLR  172 (391)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCc-ccHHHHHHHHHhCC--CccceeeehhcCccHHHHHHHH
Confidence                1257999999999999999999999999999999966 89999999999998  5556 46788999999999999


Q ss_pred             HHHHHHHcCCCCCCEEEEEEeecCc--cCCCC--------CCccccccceeeeeccCCCccccc---cccccc------c
Q 013297          126 NCVNWVESSSWDGRYGLVVCTDSAV--YAEGP--------ARPTGGAAAVVMLVGPDAPVAFES---KLRGSH------M  186 (446)
Q Consensus       126 ~A~~~l~sg~~~~~~aLVVasD~~~--y~~~~--------~~~t~GdGAvA~Ll~~~~~~~~~~---~~~g~~------~  186 (446)
                      +|.++++++  ++++||||++|.++  +.+..        ...+|||||+|+||++++...+..   .+.++.      +
T Consensus       173 ~A~~~~~~~--~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvvl~~~~~~~~~~~~~~l~~~~~~~~~~t  250 (391)
T PLN03173        173 LAKDLAENN--KGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGVEKPLFELVSAAQTILPDS  250 (391)
T ss_pred             HHHHHHHhC--CCCeEEEEEEehhhhhhCCccccchhhhhhhhhhcCceEEEEEeCCCCCCcCCcceEEEeeeeEEecCC
Confidence            999999999  56999999999975  32221        136799999999999864321110   111111      1


Q ss_pred             ccccc-ccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhh
Q 013297          187 SHAYD-FYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFND  265 (446)
Q Consensus       187 ~~~~d-f~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~  265 (446)
                      ++.+. ..++.+ ..+ ... +.......+.++.++++++++.      +++.+|+|+|++||++.++++.+.++|    
T Consensus       251 ~~~~~~~i~~~G-~~~-~l~-~~vp~~~~~~~~~~i~~~L~~~------gl~~~di~~~v~Hqgg~~Il~~v~~~L----  317 (391)
T PLN03173        251 DGAIDGHLREVG-LTF-HLL-KDVPGLISKNVEKSLTEAFKPL------GISDWNSLFWIAHPGGPAILDQVEAKL----  317 (391)
T ss_pred             ccceeeEEEcCc-eEE-EEe-cHHHHHHHHHHHHHHHHHHHhc------CCCccccCeEEECCCcHHHHHHHHHHc----
Confidence            11111 111211 110 011 3333444567777787777775      788999999999999999999999988    


Q ss_pred             ccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHh---
Q 013297          266 FMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHN---  342 (446)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~---  342 (446)
                                          |++.++..                      +|+.+.+++|||+|+|+++.|..++++   
T Consensus       318 --------------------gL~~ekl~----------------------~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~  355 (391)
T PLN03173        318 --------------------ALKPEKLR----------------------ATRHVLSEYGNMSSACVLFILDEMRKKSAE  355 (391)
T ss_pred             --------------------CCChHHHH----------------------HHHHHHHHhCcchhhHHHHHHHHHHHhhhh
Confidence                                88876532                      122223899999999999999999963   


Q ss_pred             cCCCC--CC-CEEEEEEeccccceeeEEEEEeC
Q 013297          343 KHSEL--DG-KRVVLFSYGSGLTATMFSLKLSE  372 (446)
Q Consensus       343 ~~~~~--~G-~~vll~syGsG~~~~~~~l~~~~  372 (446)
                      .+.+.  +| +++++++||+|+++++++++|..
T Consensus       356 ~~~~~~g~~~~~~l~~afGpG~t~e~~ll~~~~  388 (391)
T PLN03173        356 DGLKSTGEGLEWGVLFGFGPGLTVETVVLHSVA  388 (391)
T ss_pred             cCCCCCCCCcceEEEEEeCchHHHHHHHHhhcc
Confidence            12222  33 88999999999999999999854

>PLN02377 3-ketoacyl-CoA synthase

Probab=100.00  E-value=6.7e-36  Score=310.03  Aligned_cols=313  Identities=17%  Similarity=0.253  Sum_probs=226.0

Q ss_pred             CCceeEEeEEEEecCCc--cccHHHHHHhc---C-CCcc------ee--EEeecceEEecC------CC-------CCCH
Q 013297            1 MAKNVGILAMDIYFPPT--CVQQEALEAHD---G-ASKG------KY--TIGLGQECMAFC------SE-------VEDV   53 (446)
Q Consensus         1 ~~~~vgI~~i~~y~P~~--~v~~~~l~~~~---g-~~~~------k~--~~Glg~r~~av~------~~-------~Ed~   53 (446)
                      .|+.|++...+.|-|+.  +++.+.+.++.   | .+++      |+  +.|+|++ ..+|      ++       .|.+
T Consensus        94 ~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sgig~~-t~~p~~~~~~~~~~~~~~~~~ea  172 (502)
T PLN02377         94 RPRPVYLVDYSCYRAPDHLKAPFARFMEHSRLTGDFDDSSLEFQRKILERSGLGED-TYVPEAMHYIPPRPSMAAAREEA  172 (502)
T ss_pred             CCCCEEEEeeeeecCCccccccHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCCCc-cccCchhccCCccchHHHHHHHH
Confidence            36789999999999875  67887776553   3 2332      22  5799873 3343      11       2568


Q ss_pred             HHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeC-CcChhHHHHHHHHHHHHH
Q 013297           54 ISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST-NACYGGTAALFNCVNWVE  132 (446)
Q Consensus        54 ~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~-~aC~gg~~AL~~A~~~l~  132 (446)
                      .+++..|+++||+++|++|+|||.||+ |+|+++..|+++++|+++||+  .+++.+||++ +||+||+.||++|.++++
T Consensus       173 ~~l~~~A~~~aL~kaGi~p~dID~LVv-~cS~~~~~PSlaa~V~~~LGl--r~~v~afdL~gmGCsggl~aL~lA~~ll~  249 (502)
T PLN02377        173 EQVMFGALDNLFANTNVNPKDIGILVV-NCSLFNPTPSLSAMIVNKYKL--RGNIRSFNLGGMGCSAGVIAVDLAKDMLQ  249 (502)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCCEEEE-ECCCCCCCCcHHHHHHHHhCC--CCCCeEEecccchhhHHHHHHHHHHHHHH
Confidence            999999999999999999999999987 899998999999999999998  6799999999 799999999999999999


Q ss_pred             cCCCCCCEEEEEEeecCcc----CCCCC----CccccccceeeeeccCCCcc----cc-cccccccc--c-ccccc-ccc
Q 013297          133 SSSWDGRYGLVVCTDSAVY----AEGPA----RPTGGAAAVVMLVGPDAPVA----FE-SKLRGSHM--S-HAYDF-YKP  195 (446)
Q Consensus       133 sg~~~~~~aLVVasD~~~y----~~~~~----~~t~GdGAvA~Ll~~~~~~~----~~-~~~~g~~~--~-~~~df-~~p  195 (446)
                      ++  ++++||||++|..+.    .+...    ..+|||||+|+||++.+...    +. .++..++.  . +.++. +.|
T Consensus       250 ~~--~~~~aLVVstE~~S~~~~~~d~~s~lv~n~LFgDGAaAvlLs~~~~~~~~a~~~l~~iv~t~~~~d~~~~~~i~~~  327 (502)
T PLN02377        250 VH--RNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYKLVHVVRTHRGADDKAFRCVYQE  327 (502)
T ss_pred             cC--CCCEEEEEEEeccccccCCCCCccccccceeeccccEEEEEecccccccccccccceEEEEEEEEcCCccceeeec
Confidence            99  559999999999732    22222    36799999999999843210    00 01122221  1 12222 222


Q ss_pred             ---CCCC------CCcccCChhHHHHHH-------------------HHHHHHHHHHHHHhhhhhCCCCCcCCCceeecc
Q 013297          196 ---NLAS------EYPVVDGKLSQTCYL-------------------MALDTCYKCLCSKYEKLEGKQFSLSNADYFVFH  247 (446)
Q Consensus       196 ---~~~~------~~p~~dG~~s~~~yl-------------------~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H  247 (446)
                         .++.      +.+.+.|+. ...++                   ..+++.++..++..     .+...+||||||+|
T Consensus       328 ~d~~G~~g~~ls~dl~~v~g~~-l~~~i~~lg~~vl~~se~~~~~a~~~~~~~~~~~l~~~-----~p~~~~didhf~iH  401 (502)
T PLN02377        328 QDDAGKTGVSLSKDLMAIAGEA-LKTNITTLGPLVLPISEQLLFFATLVVKKLFNKKMKPY-----IPDFKLAFDHFCIH  401 (502)
T ss_pred             cccCCCCCCCCCcchhhHhhHH-HHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhc-----cCCcHhhcCEEEEC
Confidence               2221      112233221 11111                   11122222111111     01346899999999


Q ss_pred             CcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcccccccccc
Q 013297          248 SPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNM  327 (446)
Q Consensus       248 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~  327 (446)
                      |++.++++.+.++|                        |+++++      +|+...++                +++|||
T Consensus       402 qggr~IId~v~k~L------------------------gL~~~~------~e~sr~tL----------------~r~GNT  435 (502)
T PLN02377        402 AGGRAVIDELEKNL------------------------QLLPVH------VEASRMTL----------------HRFGNT  435 (502)
T ss_pred             CCCHHHHHHHHHHc------------------------CCCccc------chHHHHHH----------------HhcCCc
Confidence            99999999999988                        776532      44555666                899999


Q ss_pred             ccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEEeC
Q 013297          328 YTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSE  372 (446)
Q Consensus       328 ~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~~~  372 (446)
                      +|+|+|+.|+.++++ +++++||+|++++||+|+++++.++++..
T Consensus       436 SSaSI~~aL~~~~~~-grik~Gd~VlliaFGsGf~~~s~v~~~~~  479 (502)
T PLN02377        436 SSSSIWYELAYIEAK-GRMRKGNRVWQIAFGSGFKCNSAVWEALR  479 (502)
T ss_pred             hhhHHHHHHHHHHHc-CCCCCCCeEEEEEEccccEeeeEEEEEec
Confidence            999999999999887 88999999999999999999999999865

>PLN02854 3-ketoacyl-CoA synthase

Probab=100.00  E-value=3.6e-35  Score=304.57  Aligned_cols=312  Identities=19%  Similarity=0.254  Sum_probs=222.2

Q ss_pred             CceeEEeEEEEecCCc--cccHHHHHHhc---C-CCcc------ee--EEeecceEEecCC------C-------CCCHH
Q 013297            2 AKNVGILAMDIYFPPT--CVQQEALEAHD---G-ASKG------KY--TIGLGQECMAFCS------E-------VEDVI   54 (446)
Q Consensus         2 ~~~vgI~~i~~y~P~~--~v~~~~l~~~~---g-~~~~------k~--~~Glg~r~~av~~------~-------~Ed~~   54 (446)
                      |+.|++...+.|-|+.  +++.+.+.++.   | .+++      |+  ++|+|++.. +|+      +       .+.+.
T Consensus       111 ~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sg~g~~ty-~P~~~~~~~~~~~~~~~r~ea~  189 (521)
T PLN02854        111 SKPVYLVDFACYKPEDERKISVDSFLTMTEENGSFEDETVQFQRRISTRSGLGDETY-LPRGITSRPPNLCMEEARAEAE  189 (521)
T ss_pred             CCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCccc-cCccccCCCCcchHHHHHHHHH
Confidence            6789999999999875  67777766543   3 2333      22  589998753 221      1       23456


Q ss_pred             HHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeC-CcChhHHHHHHHHHHHHHc
Q 013297           55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST-NACYGGTAALFNCVNWVES  133 (446)
Q Consensus        55 ~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~-~aC~gg~~AL~~A~~~l~s  133 (446)
                      .....|++++|+++|++|+|||.||+ ++|+++..|+++++|+++||+  ..++.+||++ .||+||+.||++|.+++++
T Consensus       190 ~v~~~~~~~lL~kaGi~p~dID~LIv-~cS~~~p~PSlAa~I~n~LGl--r~~i~afdLsgmGCSggl~aL~lA~~lL~~  266 (521)
T PLN02854        190 AVMFGALDSLFSKTGVKPRDIGILIV-NCSLFNPTPSLSAMIVNHYKL--RTDIKSYNLGGMGCSAGLISIDLANDLLKA  266 (521)
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEE-ECCCCCCCCCHHHHHHHHhCC--CCCceEEecccchhhhHHHHHHHHHHHHHh
Confidence            66778899999999999999999998 477888899999999999998  5699999998 8999999999999999999


Q ss_pred             CCCCCCEEEEEEeecCccCC--CCC------CccccccceeeeeccCCCc-c---ccc-ccccccc---ccccc-ccccC
Q 013297          134 SSWDGRYGLVVCTDSAVYAE--GPA------RPTGGAAAVVMLVGPDAPV-A---FES-KLRGSHM---SHAYD-FYKPN  196 (446)
Q Consensus       134 g~~~~~~aLVVasD~~~y~~--~~~------~~t~GdGAvA~Ll~~~~~~-~---~~~-~~~g~~~---~~~~d-f~~p~  196 (446)
                      +  ++++||||++|..+...  +.+      ..+|||||+|+||++.+.. .   +.. +...++.   .+.++ .+.|.
T Consensus       267 ~--~~~~aLVVstE~~S~~~y~g~Drs~lv~~~LFgDGAAAvlLs~~~~~~~~~k~~L~~~v~t~~~ad~~~~~~i~~~~  344 (521)
T PLN02854        267 N--PNSYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAVLLSNKARDRKRSKYQLVHTVRTHKGADDKNYNCVYQRE  344 (521)
T ss_pred             C--CCCeEEEEEEeeeecCCCCCCchhhhcceeeeccceeEEEEecccccccccchheeeEEEEEEeeCCCccCeEEecc
Confidence            9  55999999999985211  122      3579999999999985421 0   000 1112221   11122 22221


Q ss_pred             --CCC-------CCcc-----------cCChhHHHHHH--HHHHHHHHHHHHHhhhhhCCCCCc------CCCceeeccC
Q 013297          197 --LAS-------EYPV-----------VDGKLSQTCYL--MALDTCYKCLCSKYEKLEGKQFSL------SNADYFVFHS  248 (446)
Q Consensus       197 --~~~-------~~p~-----------~dG~~s~~~yl--~~l~~~~~~~~~~~~~~~~~~~~~------~did~~i~H~  248 (446)
                        .+.       +.+.           +.|+..+....  ..+...+++.+.+      .++++      +||||||+||
T Consensus       345 d~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i~~~L~~------~gl~~~~pd~~~didhf~iHq  418 (521)
T PLN02854        345 DDKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLVRRKLLK------AKVKPYIPDFKLAFEHFCIHA  418 (521)
T ss_pred             CCCCcccccccccccchhhhhhhhhhhhccccccchHHHHHHHHHHHHHHHHH------cCCCccCCcccccCcEEEECC
Confidence              110       1111           12322211110  0112223333332      25554      6899999999


Q ss_pred             cchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccccccccccc
Q 013297          249 PYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMY  328 (446)
Q Consensus       249 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~  328 (446)
                      ++.++++.+.++|                        |+++++      +|+...++                +++|||+
T Consensus       419 ggr~IId~v~k~L------------------------gL~~~~------~e~sr~tL----------------~rfGNTS  452 (521)
T PLN02854        419 GGRAVLDELQKNL------------------------QLSDWH------MEPSRMTL----------------HRFGNTS  452 (521)
T ss_pred             CCHHHHHHHHHHc------------------------CCCccc------ccchHHHh----------------hhcCChH
Confidence            9999999999998                        776432      33444555                8999999


Q ss_pred             cchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEEeC
Q 013297          329 TASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSE  372 (446)
Q Consensus       329 saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~~~  372 (446)
                      |+|+|+.|+.+.++ +++++||+|++++||+|+++++.+++|..
T Consensus       453 SASI~~~L~~~~~k-Grik~GD~Vl~iaFGsGft~~sav~~~~~  495 (521)
T PLN02854        453 SSSLWYELAYTEAK-GRVSAGDRVWQIAFGSGFKCNSAVWKALR  495 (521)
T ss_pred             hhHHHHHHHHHHHc-CCCCCCCEEEEEEEchhhhhhheeeEEec
Confidence            99999999999987 88999999999999999999999999976

>PLN02932 3-ketoacyl-CoA synthase

Probab=100.00  E-value=6e-35  Score=301.28  Aligned_cols=311  Identities=21%  Similarity=0.272  Sum_probs=222.1

Q ss_pred             CCceeEEeEEEEecCCc--cccHHHHHHhc------C-CCcc---------ee--EEeecceEEecCCC-----------
Q 013297            1 MAKNVGILAMDIYFPPT--CVQQEALEAHD------G-ASKG---------KY--TIGLGQECMAFCSE-----------   49 (446)
Q Consensus         1 ~~~~vgI~~i~~y~P~~--~v~~~~l~~~~------g-~~~~---------k~--~~Glg~r~~av~~~-----------   49 (446)
                      .|+.|++...+.|-|+.  +++.+.+.++.      | .+++         |+  ++|||+|+.. +..           
T Consensus        64 ~~~~vyl~d~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~rsGig~~t~~-p~~~~~~~~~~~~~  142 (478)
T PLN02932         64 RPKPVYLVDFSCYLPPSHLKASIQTIMGHVRRVREAGAWKQESDYLMDFCEKILERSGLGQETYI-PEGLQCLPLQQNLA  142 (478)
T ss_pred             CCCcEEEEeeeeecCcccccccHHHHHHHHHhhcccCCCCccchhHHHHHHHHHHHcCCCCceee-ccccccCCHHHHHH
Confidence            36789999999999875  57777766543      2 2222         22  5799999854 322           


Q ss_pred             --CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeC-CcChhHHHHHHH
Q 013297           50 --VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST-NACYGGTAALFN  126 (446)
Q Consensus        50 --~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~-~aC~gg~~AL~~  126 (446)
                        .|.+.+|+..|++++|+++|++|+|||.||++|+++. ..|+++.+|+++||+  .+++.+||++ +||+||+.||++
T Consensus       143 ~~~~ea~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~-~~Pslaa~V~~~lGl--r~~i~~fdL~gmGCSggl~aL~l  219 (478)
T PLN02932        143 VSRKETEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFN-PTPSLSSILVNKFKL--RDNIKSLNLGGMGCSAGVIAIDA  219 (478)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCC-CCCcHHHHHHHHhCC--CCCceEEEeccchhhhHHHHHHH
Confidence              1248899999999999999999999999999999996 799999999999998  6789999999 899999999999


Q ss_pred             HHHHHHcCCCCCCEEEEEEeecCcc----CCCC----CCccccccceeeeeccCCCc------cccccccccccc---cc
Q 013297          127 CVNWVESSSWDGRYGLVVCTDSAVY----AEGP----ARPTGGAAAVVMLVGPDAPV------AFESKLRGSHMS---HA  189 (446)
Q Consensus       127 A~~~l~sg~~~~~~aLVVasD~~~y----~~~~----~~~t~GdGAvA~Ll~~~~~~------~~~~~~~g~~~~---~~  189 (446)
                      |.++++++  ++++||||++|..+.    .+..    ...+|||||+|+||++.+..      .+. ....++..   ..
T Consensus       220 A~~ll~~~--~~~~aLVVstE~~S~~~~~~d~r~~l~t~~LFgDGAAAvlLs~~~~~~~~~~~~L~-~~v~t~~~ad~~~  296 (478)
T PLN02932        220 AKSLLQVH--RNTYALVVSTENITQNLYLGNNKSMLVTNCLFRIGGAAILLSNRSRDRKRAKYELV-HTVRVHTGADDRS  296 (478)
T ss_pred             HHHHHHcC--CCCeEEEEEEeecccccCCCcchhhhccceeecccceEEEEecccccccCcceEEE-eeeeeeeccCCCc
Confidence            99999999  559999999999732    1211    23679999999999986421      111 01122211   11


Q ss_pred             cc-ccccC---CC-----C-CCccc-----------CChhH------HHHHHHHHHHHHHHHHHHhhhhhCCCCCc---C
Q 013297          190 YD-FYKPN---LA-----S-EYPVV-----------DGKLS------QTCYLMALDTCYKCLCSKYEKLEGKQFSL---S  239 (446)
Q Consensus       190 ~d-f~~p~---~~-----~-~~p~~-----------dG~~s------~~~yl~~l~~~~~~~~~~~~~~~~~~~~~---~  239 (446)
                      ++ .+.+.   +.     + +.|.+           .|+..      +..++..+.   +++.+..    ..+..+   +
T Consensus       297 ~~~v~~~~d~~G~~g~~Lsk~lp~~~~~al~~ni~~~~p~v~p~~e~~~~~~~~~~---~~~~k~~----~~~~~~~~~~  369 (478)
T PLN02932        297 YECATQEEDEDGIVGVSLSKNLPMVAARTLKINIATLGPLVLPLSEKFHFFVRFVK---KKFFNPK----LKHYIPDFKL  369 (478)
T ss_pred             cccceeecccCCcceeeECccchHHHHHHHhhhhhccccccccchhhhHHHHHHhH---HHHHHHH----hhcCcHhHHh
Confidence            11 12221   10     0 11111           11110      011111111   1111110    012222   6


Q ss_pred             CCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcc
Q 013297          240 NADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTL  319 (446)
Q Consensus       240 did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~  319 (446)
                      +||||++||++.++++.+.++|                        |++.+      ++|+...++              
T Consensus       370 ~id~f~iHqggr~IIdav~k~L------------------------gL~~~------~~e~s~~tL--------------  405 (478)
T PLN02932        370 AFEHFCIHAGGRALIDEMEKNL------------------------HLTPL------DVEASRMTL--------------  405 (478)
T ss_pred             hhceEEEccCCHHHHHHHHHHc------------------------CCChH------HHHHHHHHH--------------
Confidence            8999999999999999999988                        77754      355666666              


Q ss_pred             ccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEEeC
Q 013297          320 IPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSE  372 (446)
Q Consensus       320 ~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~~~  372 (446)
                        +++|||+|+|+|+.|+.+..+ +++++||+|++++||+|+++++.+++.-.
T Consensus       406 --~rfGNTSSaSI~~~L~~~ea~-grik~Gd~vl~iaFGsGf~~~s~vw~~~~  455 (478)
T PLN02932        406 --HRFGNTSSSSIWYELAYTEAK-GRMKKGDRIWQIALGSGFKCNSSVWVALR  455 (478)
T ss_pred             --HHhCChhhhHHHHHHHHHHHc-CCCCCCCEEEEEEEeccHHHHHHHHHHhc
Confidence              999999999999999999877 78899999999999999999999887643

>PLN02192 3-ketoacyl-CoA synthase

Probab=100.00  E-value=5.8e-34  Score=294.94  Aligned_cols=313  Identities=17%  Similarity=0.220  Sum_probs=218.1

Q ss_pred             CceeEEeEEEEecCCc--cccHHHHHHhc---C-CCcc------ee--EEeecceEEecCC------C-------CCCHH
Q 013297            2 AKNVGILAMDIYFPPT--CVQQEALEAHD---G-ASKG------KY--TIGLGQECMAFCS------E-------VEDVI   54 (446)
Q Consensus         2 ~~~vgI~~i~~y~P~~--~v~~~~l~~~~---g-~~~~------k~--~~Glg~r~~av~~------~-------~Ed~~   54 (446)
                      |+.|++...+.|-|+.  +++.+.+.++.   | .+++      |+  ++|+|++.. +|+      +       .+.+.
T Consensus        99 ~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sglg~~t~-~p~~~~~~~~~~~~~~~~~Ea~  177 (511)
T PLN02192         99 PRPVYLVDFSCYKPDDSRKCTRKIFMDRSKLTGSFTEENLEFQRKILERSGLGESTY-LPEAVLNVPPNPCMAEARKEAE  177 (511)
T ss_pred             CCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCccc-CChhhccCCCCccHHHHHHHHH
Confidence            6789999999999876  57777776554   2 2333      22  589998753 221      1       24478


Q ss_pred             HHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeC-CcChhHHHHHHHHHHHHHc
Q 013297           55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST-NACYGGTAALFNCVNWVES  133 (446)
Q Consensus        55 ~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~-~aC~gg~~AL~~A~~~l~s  133 (446)
                      .+...|+++||+++|++|+|||.||++ ++++...|++++.|+++||+  ..++.+||++ +||+||+.||++|.+++++
T Consensus       178 ~~~~~Aa~~aL~kaGi~p~DIDiLIv~-~S~~~~~PSlaa~I~n~lGl--r~~i~afdLsgmGCSggl~aLdlA~~lL~a  254 (511)
T PLN02192        178 TVMFGAIDQLLAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKL--RGNILSYNLGGMGCSAGLISIDLAKHLLQV  254 (511)
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEEE-CCCCCCCchHHHHHHHHhCC--CCCceEEEcccchhhhHHHHHHHHHHHHHc
Confidence            899999999999999999999999987 56788899999999999998  5689999999 7999999999999999999


Q ss_pred             CCCCCCEEEEEEeecCccCC--CCCC------ccccccceeeeeccCCCcccc--cccc---cccccc---ccc-ccccC
Q 013297          134 SSWDGRYGLVVCTDSAVYAE--GPAR------PTGGAAAVVMLVGPDAPVAFE--SKLR---GSHMSH---AYD-FYKPN  196 (446)
Q Consensus       134 g~~~~~~aLVVasD~~~y~~--~~~~------~t~GdGAvA~Ll~~~~~~~~~--~~~~---g~~~~~---~~d-f~~p~  196 (446)
                      +  ++++||||++|..+...  +.++      .+|||||+|+||++.+.-.-.  .++.   .++...   .++ .+.|.
T Consensus       255 ~--~~~~aLVVstE~~S~n~y~g~drs~lv~n~LFgDGAaAvLLs~~~~~~~~~k~~L~~~vrt~~~~dd~~~~~v~~~e  332 (511)
T PLN02192        255 H--PNSYALVISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNKRSDRRRSKYQLVHTVRTHKGADDKCFACVTQEE  332 (511)
T ss_pred             C--CCCeEEEEEEEeccccCCCCCCHHHHhccccccccceEEEEeccccccccccceeeeeEEEEecCChhhccceeccc
Confidence            9  55999999999985221  1222      579999999999985321000  0111   111111   111 11221


Q ss_pred             CC---------CCCcccCChh-H--H--------------HHHHH-HHHHHHHHHHHHhhhhhCCCCCcCCCceeeccCc
Q 013297          197 LA---------SEYPVVDGKL-S--Q--------------TCYLM-ALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSP  249 (446)
Q Consensus       197 ~~---------~~~p~~dG~~-s--~--------------~~yl~-~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p  249 (446)
                      ..         .+.|.+-|.. .  +              ..++. .-++.++...+...     +.-..+|||||+||+
T Consensus       333 d~~g~~g~~Lskdl~~vag~al~~ni~~l~p~vlp~~e~~~~~~~m~gr~vfk~~~~~~~-----p~~~~~Idhf~iHqg  407 (511)
T PLN02192        333 DSAGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKLKPYI-----PDFKLAFEHFCIHAG  407 (511)
T ss_pred             ccccceeeEecchhhhhhhhhhhhhhhhcccccCccchhhceeEEEcChHHHHHHhhhcc-----HHHHHhhceEeeccC
Confidence            00         0000000100 0  0              00000 00111111111000     001247999999999


Q ss_pred             chHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcccccccccccc
Q 013297          250 YNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYT  329 (446)
Q Consensus       250 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~s  329 (446)
                      +.++++.+.++|                        |++.+      ++|+...++                +++|||+|
T Consensus       408 gr~IId~v~k~L------------------------gL~~~------~~e~sr~tL----------------~rfGNTSS  441 (511)
T PLN02192        408 GRAVLDELEKNL------------------------QLSDW------HMEPSRMTL----------------YRFGNTSS  441 (511)
T ss_pred             CHHHHHHHHHHc------------------------CCCch------hhhHHHHHH----------------hHcCChHH
Confidence            999999999988                        77653      345556666                89999999


Q ss_pred             chHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEEeC
Q 013297          330 ASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSE  372 (446)
Q Consensus       330 aS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~~~  372 (446)
                      +|+|+.|+.+.++ +++++||+|++++||+|+++++.+++|-.
T Consensus       442 aSI~~aL~~~eak-grik~GDrVl~iaFGsGf~~~sav~~~~~  483 (511)
T PLN02192        442 SSLWYELAYSEAK-GRIKKGDRTWQIAFGSGFKCNSAVWKALR  483 (511)
T ss_pred             hHHHHHHHHHHHc-CCCCCCCEEEEEEEcchHhhhhhheeeec
Confidence            9999999999987 88999999999999999999999999965

>PLN00415 3-ketoacyl-CoA synthase

Probab=100.00  E-value=2.8e-32  Score=278.37  Aligned_cols=319  Identities=18%  Similarity=0.243  Sum_probs=213.0

Q ss_pred             CCceeEEeEEEEecCCc--cccHHHHHHhc---C-CCcc------ee--EEeecceEEe---------cCC--CCCCHHH
Q 013297            1 MAKNVGILAMDIYFPPT--CVQQEALEAHD---G-ASKG------KY--TIGLGQECMA---------FCS--EVEDVIS   55 (446)
Q Consensus         1 ~~~~vgI~~i~~y~P~~--~v~~~~l~~~~---g-~~~~------k~--~~Glg~r~~a---------v~~--~~Ed~~~   55 (446)
                      .|+.|++...+.|-|+.  +++.+.+.+..   | .+++      |+  ++|+|++...         .+.  +.....+
T Consensus        56 ~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~F~~~i~~rSGlg~et~~p~~~~~~~~~~~~~~~~~e~e  135 (466)
T PLN00415         56 RSKPVYLVDFSCHQPTDSCKISSETFFNMAKGAQLYTEETIQFMTRILNRSGLGDDTYSPRCMLTSPPTPSMYEARHESE  135 (466)
T ss_pred             CCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCCCCeeeCCccccCCCCCChhhhHHHHH
Confidence            36789999999999764  57777665432   2 1222      11  3455553211         111  2344567


Q ss_pred             HHHH-HHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCC-cChhHHHHHHHHHHHHHc
Q 013297           56 MSLT-AVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTN-ACYGGTAALFNCVNWVES  133 (446)
Q Consensus        56 lA~~-Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~-aC~gg~~AL~~A~~~l~s  133 (446)
                      |++. |++++|+++|++|+|||.||+ ++|+....|+.++.|+++||+  .+++.++|+++ ||+||+.||.+|.+++++
T Consensus       136 m~i~~A~~~aL~~aGi~p~dID~LIv-s~T~~~~~Pslaa~l~~~LGL--r~~v~~~dL~gmGCsggv~aL~lA~~ll~a  212 (466)
T PLN00415        136 LVIFGALNSLFKKTGIEPREVGIFIV-NCSLFNPNPSLSSMIVNRYKL--KTDVKTYNLSGMGCSAGAISVDLATNLLKA  212 (466)
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEE-ECcCCCCCchHHHHHHHHhCC--CCCceEEEeccccchHHHHHHHHHHHHHHh
Confidence            7777 777889999999999999985 678887899999999999998  67999999995 999999999999999999


Q ss_pred             CCCCCCEEEEEEeecCcc--CCCCC------CccccccceeeeeccCCCc----cccc-ccccccccccccc-----ccc
Q 013297          134 SSWDGRYGLVVCTDSAVY--AEGPA------RPTGGAAAVVMLVGPDAPV----AFES-KLRGSHMSHAYDF-----YKP  195 (446)
Q Consensus       134 g~~~~~~aLVVasD~~~y--~~~~~------~~t~GdGAvA~Ll~~~~~~----~~~~-~~~g~~~~~~~df-----~~p  195 (446)
                      +  |+++||||++|..+.  -++++      ..+|||||+|+||++++..    .++. .+..++..+..+-     |.-
T Consensus       213 ~--~~~~aLVVs~E~~S~~~~~~~dr~~lv~n~LFgDGAAAvlLs~~~~~~~~~~~~L~~~vrt~~~~~d~~~~~~~~~~  290 (466)
T PLN00415        213 N--PNTYAVIVSTENMTLSMYRGNDRSMLVPNCLFRVGGAAVMLSNRSQDRVRSKYELTHIVRTHKGSSDKHYTCAEQKE  290 (466)
T ss_pred             C--CCCEEEEEEEecccccccCCCcHhHhccceeecccceEEEEecCcccccCccceeeeEEEecCCCChhhhcceeeee
Confidence            9  669999999999742  12322      2679999999999986421    1110 1222222111111     111


Q ss_pred             CCCCCC-cccCChhHHHHHHHHHHHHHHHHHHHhh--------------h-hhCCCCC--cCC----CceeeccCcchHH
Q 013297          196 NLASEY-PVVDGKLSQTCYLMALDTCYKCLCSKYE--------------K-LEGKQFS--LSN----ADYFVFHSPYNKL  253 (446)
Q Consensus       196 ~~~~~~-p~~dG~~s~~~yl~~l~~~~~~~~~~~~--------------~-~~~~~~~--~~d----id~~i~H~p~~~~  253 (446)
                      + ...+ -..-.+......-+++...+..+.....              + .......  ..|    +++|++|++++++
T Consensus       291 d-~~G~~gv~Lsk~lp~va~~~l~~ni~~l~p~vlp~~e~~~~~~~~i~~~~~~~~~~~~~pd~~~~~~hf~iHpGGraV  369 (466)
T PLN00415        291 D-SKGIVGVALSKELTVVAGDTLKTNLTALGPLVLPLSEKLRFILFLVKSKLFRLKVSPYVPDFKLCFKHFCIHAGGRAL  369 (466)
T ss_pred             c-CCCcceEEEChHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHhhhhhhccCCCCCCCccccceeEEecCCcHHH
Confidence            1 0000 0000011111111222222222111100              0 0000111  123    7899999999999


Q ss_pred             HHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHH
Q 013297          254 VQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLY  333 (446)
Q Consensus       254 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~  333 (446)
                      ++.+.+.|                        +++++                      +++||+.+.+++|||+|+|++
T Consensus       370 Ldave~~L------------------------gL~~~----------------------~le~Sr~vL~r~GN~SSsSV~  403 (466)
T PLN00415        370 LDAVEKGL------------------------GLSEF----------------------DLEPSRMTLHRFGNTSSSSLW  403 (466)
T ss_pred             HHHHHHHc------------------------CCCHH----------------------HHHHHHHHHHHhCCchhhhHH
Confidence            99999888                        66643                      235555566999999999999


Q ss_pred             HHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEEeC
Q 013297          334 AALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSE  372 (446)
Q Consensus       334 l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~~~  372 (446)
                      ..|+.+..+ ++.++|+++++++||+|++++.+++++-.
T Consensus       404 yvL~~~~~~-~~~~~Gdrvl~iaFGpGf~~es~v~~~~~  441 (466)
T PLN00415        404 YELAYVEAK-CRVKRGDRVWQLAFGSGFKCNSIVWRALR  441 (466)
T ss_pred             HHHHHHHhh-ccCCCCCEEEEEEEcCcchhhHhHHHHhc
Confidence            999999877 67789999999999999999999999865

>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=100.00  E-value=2.7e-32  Score=258.28  Aligned_cols=306  Identities=17%  Similarity=0.253  Sum_probs=225.5

Q ss_pred             EEeEEEEecCCccccHHHHHHhc----CCC-cce----eE--EeecceEEecCCC---------------CCCHHHHHHH
Q 013297            6 GILAMDIYFPPTCVQQEALEAHD----GAS-KGK----YT--IGLGQECMAFCSE---------------VEDVISMSLT   59 (446)
Q Consensus         6 gI~~i~~y~P~~~v~~~~l~~~~----g~~-~~k----~~--~Glg~r~~av~~~---------------~Ed~~~lA~~   59 (446)
                      -|.++..++|++.+.|.|+...+    ... -+.    ++  .++..|+...|.+               -|.++.++++
T Consensus         3 ~i~sv~t~~Ppy~~~Qse~~d~f~~~~~~~~~~~I~r~l~~~~~i~~R~~v~Pl~~y~e~~~f~ekN~ifie~a~~l~v~   82 (356)
T COG3424           3 VIASVATALPPYRYNQSEITDSFAELPFQEGREDIPRVLHANAQINRRHLVLPLDWYREPHGFGEKNEIFIEEAVPLGVD   82 (356)
T ss_pred             eeeecccCCCccccchHHHHHHHHHhccccchHHHHHHHhhccccccceecccHhhccCCCChhhhhhhHHHHHHHHHHH
Confidence            58999999999999998775543    111 111    22  3455555443321               1468999999


Q ss_pred             HHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeC-CcChhHHHHHHHHHHHHHcCCCCC
Q 013297           60 AVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST-NACYGGTAALFNCVNWVESSSWDG  138 (446)
Q Consensus        60 Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~-~aC~gg~~AL~~A~~~l~sg~~~~  138 (446)
                      |.++||+..++.|+|||+|+++|+|+.. .|++..+|+.+|||  ++++.-+-+. .||+++.+||..|.++++++  |.
T Consensus        83 a~r~aL~~~~l~pedId~vv~vtsTG~~-~Ps~dari~~~Lgl--~p~~~Rvpv~glGCaaga~glara~~y~ra~--P~  157 (356)
T COG3424          83 ALRRALDGSPLRPEDIDAVVTVTSTGLA-TPSLDARIVGELGL--SPDTRRVPVWGLGCAAGAAGLARARDYCRAA--PD  157 (356)
T ss_pred             HHHHHhccCCCCHHHCcEEEEEeecccc-CCChhHHHHhhcCC--CCccceeeeecchhhhhhhHHHHHHHHHhhC--cc
Confidence            9999999999999999999999999976 89999999999999  7888888886 79999999999999999999  66


Q ss_pred             CEEEEEEeecCc--c--CCCC-----CCccccccceeeeeccCCCc----cccccccccccc---ccccc--cccCCCCC
Q 013297          139 RYGLVVCTDSAV--Y--AEGP-----ARPTGGAAAVVMLVGPDAPV----AFESKLRGSHMS---HAYDF--YKPNLASE  200 (446)
Q Consensus       139 ~~aLVVasD~~~--y--~~~~-----~~~t~GdGAvA~Ll~~~~~~----~~~~~~~g~~~~---~~~df--~~p~~~~~  200 (446)
                      .+|||||.|.|+  |  .+.+     ...+||||++|+|++.+.+.    ...+.+.++.+.   +..|.  |--. ...
T Consensus       158 ~~vlvV~vELCSLt~~~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s~StL~~dse~~Mgwdv~-d~G  236 (356)
T COG3424         158 ANVLVVCVELCSLTYVFADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSFSTLYPDSEDIMGWDVG-DQG  236 (356)
T ss_pred             ceEEEEEeeeeeeeeecCCCCcccceeeeeecCCeeEEEEeccccccccCCCCceecccccccCCccccccceeec-CCc
Confidence            999999999994  3  2221     13679999999999987541    122234444432   11111  1000 011


Q ss_pred             CcccCChhHHHHHH-HHHHHHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhh
Q 013297          201 YPVVDGKLSQTCYL-MALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKE  279 (446)
Q Consensus       201 ~p~~dG~~s~~~yl-~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  279 (446)
                      +-.+-.+. +-.++ .-+...+..++...      +++.+||+.|+.|++++|++++..+.|                  
T Consensus       237 ~~~vlSrd-lp~lIe~~l~~~V~~fL~~~------~ls~~dI~~w~~HPGG~KVida~~~sL------------------  291 (356)
T COG3424         237 LKVVLSRD-LPNLIESYLAPNVTTFLATH------GLSIEDIEAWVVHPGGPKVIDAYEESL------------------  291 (356)
T ss_pred             EEEEEcCc-hhHHHHHHhhhhHHHHHHHc------CCchhhhceeeeCCCCchHHHHHHHhc------------------
Confidence            11110000 01112 12344555566554      799999999999999999999999888                  


Q ss_pred             hcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEecc
Q 013297          280 KLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGS  359 (446)
Q Consensus       280 ~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGs  359 (446)
                            |++.+.                      ++.|+...+++|||+|||++..|.+.+++.  .++|++.+++++|+
T Consensus       292 ------gls~e~----------------------l~~s~~~L~~~GNMSSatvLfVL~d~l~~~--~~~g~~Gl~~A~GP  341 (356)
T COG3424         292 ------GLSPEA----------------------LELSWDVLREYGNMSSATVLFVLEDTLQKA--PKSGSRGLMFAMGP  341 (356)
T ss_pred             ------CCCHHH----------------------HHHHHHHHHHhCCccchhhHHHHHHHHHhc--CCCCcceeeeecCC
Confidence                  777653                      223444559999999999999999999982  57899999999999


Q ss_pred             ccceeeEEEEEeC
Q 013297          360 GLTATMFSLKLSE  372 (446)
Q Consensus       360 G~~~~~~~l~~~~  372 (446)
                      |++++..+++|..
T Consensus       342 Gf~sElvL~~w~~  354 (356)
T COG3424         342 GFCSELVLLDWEG  354 (356)
T ss_pred             cceeeeeeEEeec
Confidence            9999999999976

>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction

Probab=99.95  E-value=2.8e-27  Score=227.92  Aligned_cols=236  Identities=15%  Similarity=0.082  Sum_probs=181.3

Q ss_pred             HHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHH
Q 013297           53 VISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVE  132 (446)
Q Consensus        53 ~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~  132 (446)
                      ..+|+.+|++++|+++|++++|||.|+++|+++....|+.+.+|+..||+  . +.+++++.++|++++.||..|.++|+
T Consensus         7 ~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~--~-~~~~~~i~~~C~s~~~al~~A~~~i~   83 (254)
T cd00327           7 ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGI--S-GGPAYSVNQACATGLTALALAVQQVQ   83 (254)
T ss_pred             HHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCC--C-CCCcceeccHhHHHHHHHHHHHHHHH
Confidence            78999999999999999999999999999999988789999999999997  3 78899999999999999999999999


Q ss_pred             cCCCCCCEEEEEEeecCccCCCCCCccccccceeeeeccCCCc-ccc----cccccccccccccccccCCCCCCcccCCh
Q 013297          133 SSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPV-AFE----SKLRGSHMSHAYDFYKPNLASEYPVVDGK  207 (446)
Q Consensus       133 sg~~~~~~aLVVasD~~~y~~~~~~~t~GdGAvA~Ll~~~~~~-~~~----~~~~g~~~~~~~df~~p~~~~~~p~~dG~  207 (446)
                      +|..  +++||+++|.         .++||||+|+||++.+.. ...    ..+.+.....     .+.  ...      
T Consensus        84 ~g~~--~~~lv~~~e~---------~~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~~~~~-----~~~--~~~------  139 (254)
T cd00327          84 NGKA--DIVLAGGSEE---------FVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATF-----DGA--SMV------  139 (254)
T ss_pred             CCCC--CEEEEEecce---------eeecceEEEEEECcHHHHHHCCCceEEEEEEEEEcC-----CCC--CCC------
Confidence            9976  9999999998         679999999999986431 000    0112211110     000  000      


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCC
Q 013297          208 LSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTL  287 (446)
Q Consensus       208 ~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~  287 (446)
                        ...+.+.+.++++.++++.      ++.++|+|++++|+++.++.+...+.+.+                        
T Consensus       140 --~~~~~~~~~~~i~~~l~~a------g~~~~did~~~~h~~~~~~~~~~~~~~~~------------------------  187 (254)
T cd00327         140 --PAVSGEGLARAARKALEGA------GLTPSDIDYVEAHGTGTPIGDAVELALGL------------------------  187 (254)
T ss_pred             --CCCChHHHHHHHHHHHHHc------CCCHHHCCEEEccCCcCccccHHHHHHHH------------------------
Confidence              0112345566777777775      78999999999999999999998877732                        


Q ss_pred             CCCccccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCCC-------CCCEEEEEEeccc
Q 013297          288 SGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSEL-------DGKRVVLFSYGSG  360 (446)
Q Consensus       288 ~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~-------~G~~vll~syGsG  360 (446)
                      +.++..                   . -+......++||+++||.++.|..++.. .+..       +|++++++++|.|
T Consensus       188 ~~~~~~-------------------~-~~~~~~~~~~G~~~~as~~~~l~~~~~~-~~~~~~~~~~~~~~~~l~~~~g~G  246 (254)
T cd00327         188 DPDGVR-------------------S-PAVSATLIMTGHPLGAAGLAILDELLLM-LEHEFIPPTPREPRTVLLLGFGLG  246 (254)
T ss_pred             HHhCCC-------------------C-CceeccccccccchHHHHHHHHHHHHHH-HhCCCcCCCCCCcCEEEEeeEcCC
Confidence            111100                   0 0111223799999999999999999876 3333       7999999999999


Q ss_pred             cceeeEEE
Q 013297          361 LTATMFSL  368 (446)
Q Consensus       361 ~~~~~~~l  368 (446)
                      .+++++++
T Consensus       247 g~~~~~~l  254 (254)
T cd00327         247 GTNAAVVL  254 (254)
T ss_pred             CcceEEEC
Confidence            99988753

Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.

>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction

Probab=99.91  E-value=6.4e-24  Score=212.59  Aligned_cols=245  Identities=14%  Similarity=0.088  Sum_probs=177.4

Q ss_pred             HHHHHHHHHHHHHHHCCCC----cCCccEEEEEeccCCCC---------------------CccHHHHHHHHhcccCCCC
Q 013297           53 VISMSLTAVTNLLEKYKID----PKQIGRLEVGSETVIDK---------------------SKSIKTFLMQIFEKFGNTD  107 (446)
Q Consensus        53 ~~~lA~~Aa~~aL~~agi~----~~dId~li~~T~t~~~~---------------------~ps~a~~l~~~LGl~g~~~  107 (446)
                      ..+|++.|++++|+++|++    +++||.||++|+++.+.                     .|+.+..|+..||+    +
T Consensus        11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl----~   86 (332)
T cd00825          11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGI----H   86 (332)
T ss_pred             HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCC----C
Confidence            7899999999999999999    99999999999887764                     67889999999997    4


Q ss_pred             ceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCcc--CC--------------------CCCCccccccce
Q 013297          108 IEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY--AE--------------------GPARPTGGAAAV  165 (446)
Q Consensus       108 ~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y--~~--------------------~~~~~t~GdGAv  165 (446)
                      .+++++.++|++++.||+.|..+|++|..  +++||+++|....  ..                    .....++||||+
T Consensus        87 g~~~~v~~~cas~~~al~~A~~~i~~g~~--~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaa  164 (332)
T cd00825          87 GPAYDVSAACAGSLHALSLAADAVQNGKQ--DIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAG  164 (332)
T ss_pred             CCccccccHhHHHHHHHHHHHHHHHcCCC--CEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEE
Confidence            56789999999999999999999999976  9999999998621  00                    012356899999


Q ss_pred             eeeeccCCCcc-----cccccccccccccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCC
Q 013297          166 VMLVGPDAPVA-----FESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSN  240 (446)
Q Consensus       166 A~Ll~~~~~~~-----~~~~~~g~~~~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~d  240 (446)
                      |+||++.+...     ....+.+....     ..+. ....+        ....+.+.++++.++++.      +++++|
T Consensus       165 A~vL~~~~~a~~~~~~~~~~i~~~~~~-----~~~~-~~~~~--------~~~~~~~~~~i~~al~~a------gl~~~d  224 (332)
T cd00825         165 ALVVEELEHALARGAHIYAEIVGTAAT-----IDGA-GMGAF--------APSAEGLARAAKEALAVA------GLTVWD  224 (332)
T ss_pred             EEEECcHHHHHHCCCeEEEEEEEEEEc-----cCCC-CCCCC--------CcCHHHHHHHHHHHHHHc------CCCHhH
Confidence            99999864310     00011111110     1111 00000        011244556677777765      899999


Q ss_pred             CceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccc
Q 013297          241 ADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLI  320 (446)
Q Consensus       241 id~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~  320 (446)
                      ||++++|+++.++.+.+.+++....+                   +..                         -.+...+
T Consensus       225 id~~~~h~~~~~~~~~~e~~~~~~~~-------------------~~~-------------------------~~~~~~~  260 (332)
T cd00825         225 IDYLVAHGTGTPIGDVKELKLLRSEF-------------------GDK-------------------------SPAVSAT  260 (332)
T ss_pred             CCEEEccCCCCCCCCHHHHHHHHHHh-------------------CCC-------------------------CceeECC
Confidence            99999999999988887766632110                   000                         0011122


Q ss_pred             cccccccccchHHHHHHHHHHhcCCCC-------------------------CCCEEEEEEeccccceeeEEE
Q 013297          321 PKQVGNMYTASLYAALASLIHNKHSEL-------------------------DGKRVVLFSYGSGLTATMFSL  368 (446)
Q Consensus       321 ~~~~GN~~saS~~l~L~~~l~~~~~~~-------------------------~G~~vll~syGsG~~~~~~~l  368 (446)
                      ..++||+++||.++.|..++.. .+..                         +|++++++++|.|.+++++++
T Consensus       261 ~~~~G~~~aas~~~~l~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~Gg~~~~~vl  332 (332)
T cd00825         261 KAMTGNLSSAAVVLAVDEAVLM-LEHGFIPPSIHIEELDEAGLNIVTETTPRELRTALLNGFGLGGTNATLVL  332 (332)
T ss_pred             CcccccchhHhHHHHHHHHHHH-HhcCccCCCCCCCCCCcccCcccCCCCCCCCCEEEEeeecCCCeeEEEeC
Confidence            3799999999999999998765 2322                         689999999999999988764

Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).

>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2

Probab=99.89  E-value=3e-23  Score=194.48  Aligned_cols=166  Identities=22%  Similarity=0.306  Sum_probs=130.3

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhc----CCCc-----cee-----EEeecceEEecCCC-------------------
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHD----GASK-----GKY-----TIGLGQECMAFCSE-------------------   49 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~----g~~~-----~k~-----~~Glg~r~~av~~~-------------------   49 (446)
                      ....|.+||+.+|+++++|+++.+..    +.+.     +|+     ++||..|++.++++                   
T Consensus        13 g~A~Il~IgTA~P~~~~~Q~~~~e~~~~~~~~~~~~~~~~~l~ri~~~sgI~~R~~vl~~~~~~~~p~~~~~~~ps~~~R   92 (226)
T PF00195_consen   13 GPAYILSIGTAVPPHRITQEEIAEFFFRITHSDDLPDLRRKLRRIFENSGIEKRHSVLPEEWLDEYPSFWDFADPSLAER   92 (226)
T ss_dssp             SSEEEEEEEEE-SSEEEEGCCHHHHHHHHTT-TTGHHHHHHHHHHHHHST-SEEEESS-HHHHHTSGGGHSSSSS-HHHH
T ss_pred             CCeEEEEEEEeCCCceecHHHHHHHHHHHhcccchhHHHHHHHhhhhccccceeccccchhhhhcCcchhhccCccHHHH
Confidence            56899999999999999999887652    3222     233     47999999876421                   


Q ss_pred             ----CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeC-CcChhHHHHH
Q 013297           50 ----VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST-NACYGGTAAL  124 (446)
Q Consensus        50 ----~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~-~aC~gg~~AL  124 (446)
                          .+.+..|+.+|++++|+++|++++||++||+.|+|+.. .|++..+|.++|||  ++++.-+.+. .||+||+.||
T Consensus        93 ~~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~-~PglD~~l~~~LgL--~~~v~R~~i~~~GC~gg~~~L  169 (226)
T PF00195_consen   93 NALYAEEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIA-APGLDARLINRLGL--RPDVQRTPIFGMGCAGGAAGL  169 (226)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSE-CS-HHHHHHHHHT----TTSEEEEEES-GGGHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcC-CCchhHHHHhcCCC--CCCcEEEEEeccchhhHHHHH
Confidence                14578999999999999999999999999999999975 99999999999999  7899888886 7999999999


Q ss_pred             HHHHHHHHcCCCCCCEEEEEEeecCc--cC-C-CCC------CccccccceeeeeccCC
Q 013297          125 FNCVNWVESSSWDGRYGLVVCTDSAV--YA-E-GPA------RPTGGAAAVVMLVGPDA  173 (446)
Q Consensus       125 ~~A~~~l~sg~~~~~~aLVVasD~~~--y~-~-~~~------~~t~GdGAvA~Ll~~~~  173 (446)
                      ..|.++.+++  |+.+||||+.|.++  |. + ...      ..+|||||+|+||+.+|
T Consensus       170 ~~A~~~~~~~--p~a~VLvv~vElcsl~~~~~~~~~~~~lv~~aLFgDGaAA~vv~~dP  226 (226)
T PF00195_consen  170 RRAKDIARAN--PGARVLVVCVELCSLHFQAPNDDSLDNLVANALFGDGAAAVVVGADP  226 (226)
T ss_dssp             HHHHHHHHHS--TT-EEEEEEEEEGGGTHHHCCTTSHHHHHHHHHB-EEEEEEEEESS-
T ss_pred             HHHHHHHhCC--ccceEEEEEEEeeEEEEecCCcccHHHHhHHhhhcCCceEEEEccCC
Confidence            9999999999  88999999999995  32 1 111      25699999999999875

3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....

>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated

Probab=99.78  E-value=2.3e-17  Score=166.79  Aligned_cols=305  Identities=14%  Similarity=0.058  Sum_probs=195.5

Q ss_pred             CCceeEEeEEEEecCCcc------------ccHHHHHHhcCCC-cceeE--EeecceEEecCCCCCCHHHHHHHHHHHHH
Q 013297            1 MAKNVGILAMDIYFPPTC------------VQQEALEAHDGAS-KGKYT--IGLGQECMAFCSEVEDVISMSLTAVTNLL   65 (446)
Q Consensus         1 ~~~~vgI~~i~~y~P~~~------------v~~~~l~~~~g~~-~~k~~--~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL   65 (446)
                      |..+|.|.+++...|--.            +++.+.....+.+ .+++.  +|+..++  + ...+....|+..|++++|
T Consensus         1 ~~~~v~I~~~g~vs~lG~~~~~~~aa~ragi~~~~~~~~~~~~~~~~i~~~~~~~~~~--~-~~~~r~~~La~~Al~~aL   77 (348)
T PRK06147          1 MMRALAIVGSGMVTAVGLDAPSSCAAIRARLDNFQETRFIDPPGGEWLIGAPVPLPPP--W-RGPERLAEMAAPAIAEAL   77 (348)
T ss_pred             CCCceEEEecceeecCcCCHHHHHHHHHcccccccccccccCCCCCceEeecCcCCcc--c-CchHHHHHHHHHHHHHHH
Confidence            667899999999998765            2222222223332 45553  4554444  3 346788999999999999


Q ss_pred             HHCC-CCcCCccEEEEEec-----cCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCC
Q 013297           66 EKYK-IDPKQIGRLEVGSE-----TVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGR  139 (446)
Q Consensus        66 ~~ag-i~~~dId~li~~T~-----t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~  139 (446)
                      ++++ .++++||++++.++     ++.+..++.+..+++.||+  .....++++..+|.+++.||..|..+|++|.+  +
T Consensus        78 ~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~--~~~~~~~~i~~~casg~~Al~~A~~~i~~G~~--~  153 (348)
T PRK06147         78 EGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGL--RLEPGSAVIARGRVSGAVALAQARRLIAAGGC--P  153 (348)
T ss_pred             HhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCC--CCCCCcccccccchHHHHHHHHHHHHHHcCCC--C
Confidence            9999 79999999998654     3445556778899999997  34467899999999999999999999999977  9


Q ss_pred             EEEEEEeecCcc---------------CCCCCCccccccceeeeeccCCCc-cccccccccccccccccc-ccCCCCCCc
Q 013297          140 YGLVVCTDSAVY---------------AEGPARPTGGAAAVVMLVGPDAPV-AFESKLRGSHMSHAYDFY-KPNLASEYP  202 (446)
Q Consensus       140 ~aLVVasD~~~y---------------~~~~~~~t~GdGAvA~Ll~~~~~~-~~~~~~~g~~~~~~~df~-~p~~~~~~p  202 (446)
                      .+||+++|....               .+..+..++|+||+++||++.+.. .-...+.+.......+.+ ...   .-|
T Consensus       154 ~~lvgg~d~~~~~~~~~~~~~~~~l~~~~~~~G~v~GEGA~a~vLe~~~~A~~rga~i~a~g~~~~~~~~~~~~---~~p  230 (348)
T PRK06147        154 RVLVAGVDSLLTGPTLAHYEARDRLLTSQNSNGFIPGEAAAAVLLGRPAGGEAPGLPLLGLGLGREPAPVGESE---DLP  230 (348)
T ss_pred             EEEEEeeccccCHHHHHHHHHhhccCCCCCCCceeeeceEEEEEEccHhhhhcCCCceEEEEEeecCCCcccCC---CCC
Confidence            999999997521               011233579999999999986431 100111111011111211 110   001


Q ss_pred             ccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcC
Q 013297          203 VVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLG  282 (446)
Q Consensus       203 ~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  282 (446)
                       .+|        +.+.++++..+++.      ++.++||||++.|..+.+...+.....+ ...+..           . 
T Consensus       231 -~~g--------~gl~~ai~~AL~~a------gl~~~dId~v~ah~~gt~~~d~~e~~A~-~~~f~~-----------~-  282 (348)
T PRK06147        231 -LRG--------DGLTQAIRAALAEA------GCGLEDMDYRIADLNGEQYRFKEAALAE-MRLFRV-----------R-  282 (348)
T ss_pred             -CCh--------HHHHHHHHHHHHHc------CCCHHHCCEEEcCCCCCccchHHHHHHH-HHHhhh-----------c-
Confidence             122        34455666666665      7999999999999876665443321110 000000           0 


Q ss_pred             CCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHh-cCCCCCCCEEEEEEecccc
Q 013297          283 PFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHN-KHSELDGKRVVLFSYGSGL  361 (446)
Q Consensus       283 ~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~-~~~~~~G~~vll~syGsG~  361 (446)
                       ....+.                            +.....+||+++|+-.+.++..+.. .....+|.+++++|-.-.-
T Consensus       283 -~~~~~~----------------------------~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g~~~L~~s~~d~g  333 (348)
T PRK06147        283 -KEFFDL----------------------------WHPAECIGEIGAAIGPALLGVALAASRKGYGPGPNVLCHLSDDDG  333 (348)
T ss_pred             -cCCCce----------------------------ecchHhhcchHHHHHHHHHHHHHHHHHcCcCCCCcEEEEecCCCC
Confidence             000110                            0112679999999988888764422 1235689999999988655


Q ss_pred             ceeeEEEEEeC
Q 013297          362 TATMFSLKLSE  372 (446)
Q Consensus       362 ~~~~~~l~~~~  372 (446)
                      .-++++++-++
T Consensus       334 ~r~a~~l~~~~  344 (348)
T PRK06147        334 ARAALVLEYRR  344 (348)
T ss_pred             ceEEEEEeccc
Confidence            56777776543

>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species

Probab=99.75  E-value=1.8e-17  Score=159.73  Aligned_cols=168  Identities=21%  Similarity=0.306  Sum_probs=136.9

Q ss_pred             CCceeEEeEEEEecCCc--cccHHHHHHhcC----CCcc------ee--EEeecceEEecCC------CC-------CCH
Q 013297            1 MAKNVGILAMDIYFPPT--CVQQEALEAHDG----ASKG------KY--TIGLGQECMAFCS------EV-------EDV   53 (446)
Q Consensus         1 ~~~~vgI~~i~~y~P~~--~v~~~~l~~~~g----~~~~------k~--~~Glg~r~~av~~------~~-------Ed~   53 (446)
                      .|+.|++...+.|-|+.  +++.+.+.++..    .+++      |+  +.|+|++... |+      ++       +.+
T Consensus         5 R~r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~f~~~sl~F~~kIlerSGlG~eTy~-P~~~~~~p~~~s~~~a~~Ea   83 (290)
T PF08392_consen    5 RPRPVYLVDFACYKPPDELRVSREEFIEHARRCGRFDEESLDFQRKILERSGLGDETYL-PPALHEIPPDPSLAAAREEA   83 (290)
T ss_pred             CCCCEEEEeeeecCCCcccccCHHHHHHHHHhcccCChhHHHHHHHHHHhcCCCccccC-CcccccCCCcccHHHHHHHH
Confidence            36789999999999875  588888777542    2232      22  5899988642 21      11       236


Q ss_pred             HHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeC-CcChhHHHHHHHHHHHHH
Q 013297           54 ISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST-NACYGGTAALFNCVNWVE  132 (446)
Q Consensus        54 ~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~-~aC~gg~~AL~~A~~~l~  132 (446)
                      ..++..|++++|+++|++|+|||.||+.+++. .+.||++++|.+++|+  ..++..++++ +||++++.+|++|.++++
T Consensus        84 e~v~f~av~~LL~ktgv~p~dIdiLVvncs~f-~ptPSLsamIvnr~~m--r~di~~~nLsGMGCsAgliai~lA~~lL~  160 (290)
T PF08392_consen   84 EMVIFGAVDDLLAKTGVKPSDIDILVVNCSLF-NPTPSLSAMIVNRYGM--RSDIKSYNLSGMGCSAGLIAIDLAKDLLQ  160 (290)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCCEEEEECcCC-CcCCcHHHHHHHHhCC--CcCeeeecccCCcchhhHHHHHHHHHHHH
Confidence            67888999999999999999999999877664 7799999999999999  7899999997 799999999999999999


Q ss_pred             cCCCCCCEEEEEEeecCccC--CCCC------CccccccceeeeeccCCC
Q 013297          133 SSSWDGRYGLVVCTDSAVYA--EGPA------RPTGGAAAVVMLVGPDAP  174 (446)
Q Consensus       133 sg~~~~~~aLVVasD~~~y~--~~~~------~~t~GdGAvA~Ll~~~~~  174 (446)
                      .+  |+.+||||++|+.+..  .+++      ..+|++||+|+||+..+.
T Consensus       161 ~~--p~~~ALVVstE~~s~~~Y~G~~rsmlv~NcLFr~GgAAvLLSn~~~  208 (290)
T PF08392_consen  161 AH--PNSYALVVSTENISANWYRGNDRSMLVSNCLFRMGGAAVLLSNKPS  208 (290)
T ss_pred             hC--CCcEEEEEEEeecccccccCCcHHHhhccccccCCceeEEeecCcc
Confidence            99  7799999999998432  2222      367999999999999874

The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane

>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2

Probab=99.70  E-value=4.4e-17  Score=132.41  Aligned_cols=88  Identities=24%  Similarity=0.331  Sum_probs=73.6

Q ss_pred             CCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhh
Q 013297          233 GKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDA  312 (446)
Q Consensus       233 ~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~  312 (446)
                      ++|++++|||++++||++.++.+...+.+                        |++.++.+.         ++       
T Consensus         3 ~~g~~~~did~~i~hq~~~~~~~~~~~~l------------------------gi~~~~~~~---------~~-------   42 (90)
T PF08541_consen    3 RAGLSPDDIDHFIPHQASKKILDSIAKRL------------------------GIPPERFPD---------NL-------   42 (90)
T ss_dssp             HTT--GGGESEEEE-SSSHHHHHHHHHHH------------------------TS-GGGBE----------TH-------
T ss_pred             cccCCHHHCCEEEeCCCCHHHHHHHHHHc------------------------CCcHHHHHH---------HH-------
Confidence            34899999999999999999999988887                        888877653         34       


Q ss_pred             ccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEE
Q 013297          313 KVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKL  370 (446)
Q Consensus       313 ~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~  370 (446)
                               +++||+++||+|++|++++++ +++++||+|+++++|+|+++++++++|
T Consensus        43 ---------~~~Gn~~sa~~~~~L~~~~~~-g~~~~Gd~vl~~~~G~G~~~~~~~~~~   90 (90)
T PF08541_consen   43 ---------AEYGNTGSASIPINLADALEE-GRIKPGDRVLLVGFGAGFSWGAAVLRW   90 (90)
T ss_dssp             ---------HHH-B-GGGHHHHHHHHHHHT-TSSCTTEEEEEEEEETTTEEEEEEEE-
T ss_pred             ---------hccCcchhhhHHHHHHHHHHc-CCCCCCCEEEEEEEEhhheeEEEEEEC
Confidence                     899999999999999999999 789999999999999999999999987

3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....

>TIGR02845 spore_V_AD stage V sporulation protein AD

Probab=99.68  E-value=3.7e-15  Score=145.62  Aligned_cols=113  Identities=13%  Similarity=0.046  Sum_probs=95.5

Q ss_pred             CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHH
Q 013297           50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN  129 (446)
Q Consensus        50 ~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~  129 (446)
                      ++...+|+.+|++++|+++|++++|||.|++++. +.  .+..++++++.||+      +.+++.+||+++..||.+|..
T Consensus        47 EkAe~eLa~eAa~~ALekAGL~~~DID~IIvGdl-~~--Q~~~As~vA~~LGI------P~fdV~~ACSTf~~AL~lAa~  117 (327)
T TIGR02845        47 EKAERKLMEDAVNLALKKANLKKDDVDFFLAGDL-LN--QIITANFVARDLGI------PFLGLYGACSTSMETLALGAM  117 (327)
T ss_pred             chhHHHHHHHHHHHHHHHcCCCHHHCCEEEEeCC-CC--cccHHHHHHHHhCC------CEEEEeccCHHHHHHHHHHHH
Confidence            5577899999999999999999999999999873 32  34578899999995      359999999999999999999


Q ss_pred             HHHcCCCCCCEEEEEEeecCc-------cC-CC--C---CCccccccceeeeeccCC
Q 013297          130 WVESSSWDGRYGLVVCTDSAV-------YA-EG--P---ARPTGGAAAVVMLVGPDA  173 (446)
Q Consensus       130 ~l~sg~~~~~~aLVVasD~~~-------y~-~~--~---~~~t~GdGAvA~Ll~~~~  173 (446)
                      +|++|.+  ++||||+|+..+       |. ++  .   ...+|||||+|+||++.+
T Consensus       118 lI~SG~a--d~VLVV~Ssh~S~AErqfr~p~eyg~q~~~ta~~tgdGAGA~vl~~~~  172 (327)
T TIGR02845       118 LVDGGFA--DRVLAATSSHYATAERQFRYPTEYGVQKPPTAQWTVTGAGAVLLASTG  172 (327)
T ss_pred             HHhCCCC--CEEEEEEecccchhhhhcccccccccCCCCeeeEEEcccEEEEEeecC
Confidence            9999987  999999988763       22 22  1   224599999999999875

Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.

>PRK08304 stage V sporulation protein AD; Validated

Probab=99.61  E-value=6.8e-14  Score=137.09  Aligned_cols=113  Identities=14%  Similarity=0.080  Sum_probs=95.5

Q ss_pred             CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHH
Q 013297           50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN  129 (446)
Q Consensus        50 ~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~  129 (446)
                      ++...+|+.+|++++|+++|++++|||.+|+++...   .+..++++++.||+      +++++.+||+++..||.+|..
T Consensus        53 EkAeseLa~eAa~~ALekAGI~~~DID~lI~Gdll~---Q~~sAs~vA~~LGI------Pa~dV~gACST~~~AL~lAa~  123 (337)
T PRK08304         53 EKAERKMMEDAIQQALQKANLKKSDIDYLLAGDLLN---QIISANFAARELGI------PFLGLYGACSTMMESLALGSM  123 (337)
T ss_pred             cccHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCC---CcchHHHHHHHhCC------cEEEEeccCHHHHHHHHHHHH
Confidence            567789999999999999999999999999997532   34678899999984      589999999999999999999


Q ss_pred             HHHcCCCCCCEEEEEEeecCc-------cCC--C----CCCccccccceeeeeccCC
Q 013297          130 WVESSSWDGRYGLVVCTDSAV-------YAE--G----PARPTGGAAAVVMLVGPDA  173 (446)
Q Consensus       130 ~l~sg~~~~~~aLVVasD~~~-------y~~--~----~~~~t~GdGAvA~Ll~~~~  173 (446)
                      +|++|.+  ++||||+|+...       |..  +    +....+++||.|+||+++.
T Consensus       124 lI~SG~a--d~VLVV~Ssh~s~aerqfr~P~eyg~qrp~taqwtvtGAGA~i~~~~~  178 (337)
T PRK08304        124 LIDGGFA--DRVLAATSSHFATAERQFRFPTEYGGQRPPTAQWTVTGAGAVLLSREG  178 (337)
T ss_pred             HHhcCCC--CEEEEEEcchhhhhhhhccCchhccccCCCcceEEeeccEEEEEecCC
Confidence            9999987  999999999862       221  1    1224589999999999875

>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II

Probab=99.57  E-value=2.2e-13  Score=140.35  Aligned_cols=180  Identities=15%  Similarity=0.144  Sum_probs=120.5

Q ss_pred             CHHHHHHHHHHHHHHHCCCCcCCccE----EEEEeccCCC--------------------------CCccHHHHHHHHhc
Q 013297           52 DVISMSLTAVTNLLEKYKIDPKQIGR----LEVGSETVID--------------------------KSKSIKTFLMQIFE  101 (446)
Q Consensus        52 d~~~lA~~Aa~~aL~~agi~~~dId~----li~~T~t~~~--------------------------~~ps~a~~l~~~LG  101 (446)
                      ....|++.|++++|+++|+++++||.    +++++..+..                          ..+..+.+|+..||
T Consensus        70 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  149 (406)
T cd00834          70 RFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLG  149 (406)
T ss_pred             HHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhC
Confidence            35689999999999999999876654    5566655321                          12456789999999


Q ss_pred             ccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCc--c-----------C--------------CC
Q 013297          102 KFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV--Y-----------A--------------EG  154 (446)
Q Consensus       102 l~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~--y-----------~--------------~~  154 (446)
                      +    +.+.+.+..+|++++.||..|..+|++|.+  +++||+++|...  +           .              ..
T Consensus       150 l----~g~~~~v~~acas~~~Al~~A~~~i~~G~~--d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~  223 (406)
T cd00834         150 L----RGPNYTVSTACASGAHAIGDAARLIRLGRA--DVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKD  223 (406)
T ss_pred             C----CCcccccchHHHHHHHHHHHHHHHHHcCCC--CEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCC
Confidence            7    245688889999999999999999999988  999999999763  0           0              01


Q ss_pred             CCCccccccceeeeeccCCCc-c----cccccccccccccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhh
Q 013297          155 PARPTGGAAAVVMLVGPDAPV-A----FESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYE  229 (446)
Q Consensus       155 ~~~~t~GdGAvA~Ll~~~~~~-~----~~~~~~g~~~~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~  229 (446)
                      .+..++||||+|+||++.+.. .    +...+.|....  .|.+...    .|..++        ..+.+++++.+++. 
T Consensus       224 ~~g~~~geGA~a~vL~~~~~A~~~g~~~~a~i~g~~~~--~d~~~~~----~~~~~~--------~~~~~~i~~al~~a-  288 (406)
T cd00834         224 RDGFVLGEGAGVLVLESLEHAKARGAKIYAEILGYGAS--SDAYHIT----APDPDG--------EGAARAMRAALADA-  288 (406)
T ss_pred             CCCEeeeccEEEEEEecHHHHHHCCCeEEEEEEEEEec--ccCCCCC----CCCCCc--------HHHHHHHHHHHHHc-
Confidence            123468999999999986421 0    10112222111  1111100    011112        23344555555654 


Q ss_pred             hhhCCCCCcCCCceeeccCcchHHHHHH
Q 013297          230 KLEGKQFSLSNADYFVFHSPYNKLVQKS  257 (446)
Q Consensus       230 ~~~~~~~~~~did~~i~H~p~~~~~~~~  257 (446)
                           +++++|||++.+|..+....+..
T Consensus       289 -----gi~~~dId~v~~h~tgt~~~d~~  311 (406)
T cd00834         289 -----GLSPEDIDYINAHGTSTPLNDAA  311 (406)
T ss_pred             -----CCCHHHCCEEecccccCccccHH
Confidence                 79999999999999887766554

KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.

>smart00825 PKS_KS Beta-ketoacyl synthase

Probab=99.47  E-value=1.5e-12  Score=135.01  Aligned_cols=177  Identities=17%  Similarity=0.144  Sum_probs=119.6

Q ss_pred             HHHHHHHHHHHHHHHCCCCcCCcc----EEEEEeccCCCC-------------------CccHHHHHHHHhcccCCCCce
Q 013297           53 VISMSLTAVTNLLEKYKIDPKQIG----RLEVGSETVIDK-------------------SKSIKTFLMQIFEKFGNTDIE  109 (446)
Q Consensus        53 ~~~lA~~Aa~~aL~~agi~~~dId----~li~~T~t~~~~-------------------~ps~a~~l~~~LGl~g~~~~~  109 (446)
                      ...|++.|++++|+++|+++++||    .|++++.++.+.                   .+..+..|...||+    +.+
T Consensus        87 ~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl----~g~  162 (424)
T smart00825       87 QQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDL----RGP  162 (424)
T ss_pred             HHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCC----CCC
Confidence            345999999999999999999998    788888765432                   34567789999997    235


Q ss_pred             eeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCc------------c----------CCCCCCccccccceee
Q 013297          110 GVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV------------Y----------AEGPARPTGGAAAVVM  167 (446)
Q Consensus       110 ~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~------------y----------~~~~~~~t~GdGAvA~  167 (446)
                      ++.+..+|++++.||..|..+|++|.+  +.+||+++|...            +          +...+..++||||+|+
T Consensus       163 ~~~v~~acasg~~Al~~A~~~I~~G~~--d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~~g~~~geGAaal  240 (424)
T smart00825      163 SVTVDTACSSSLVALHLACQSLRSGEC--DMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDADADGYVRGEGVGVV  240 (424)
T ss_pred             ccccccHhHHHHHHHHHHHHHHHcCCC--CeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCCCCcccccceEEEE
Confidence            788999999999999999999999987  999999999631            0          0011234589999999


Q ss_pred             eeccCCCc-c----cccccccccccccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCCc
Q 013297          168 LVGPDAPV-A----FESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNAD  242 (446)
Q Consensus       168 Ll~~~~~~-~----~~~~~~g~~~~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~did  242 (446)
                      ||++.... .    +...+.+.....  |-...  ....|  ++        ..+..+++..+++.      ++.++|||
T Consensus       241 VLe~~e~A~~~g~~i~a~I~g~~~~~--~~~~~--~~~~~--~~--------~~~~~a~~~al~~A------gl~~~dId  300 (424)
T smart00825      241 VLKRLSDALRDGDPILAVIRGSAVNQ--DGRSN--GLTAP--SG--------PAQARLIRQALARA------GVDPADVD  300 (424)
T ss_pred             EEccHHHHHHCCCeEEEEEEEEEEeC--CCCCC--CCCCc--CH--------HHHHHHHHHHHHHh------CCCHHHcc
Confidence            99975321 0    000122221110  10000  00001  11        22234555566655      79999999


Q ss_pred             eeeccCcchHHHH
Q 013297          243 YFVFHSPYNKLVQ  255 (446)
Q Consensus       243 ~~i~H~p~~~~~~  255 (446)
                      ++..|..+.+..+
T Consensus       301 ~i~~h~tgt~~~d  313 (424)
T smart00825      301 YVEAHGTGTPLGD  313 (424)
T ss_pred             EEEeeCCCCCCCC
Confidence            9999987765433

The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.

>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism

Probab=99.43  E-value=1.5e-11  Score=125.69  Aligned_cols=106  Identities=15%  Similarity=0.129  Sum_probs=91.3

Q ss_pred             eecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcC
Q 013297           38 GLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNAC  117 (446)
Q Consensus        38 Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC  117 (446)
                      |+|+..+.- ..+.+..+|+++|++++|+++|+++++||.|++++..+....+..+..++..||+   +.++.+++.++|
T Consensus         2 G~g~t~~~~-~~~~~~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl---~~~~~~~v~~~c   77 (375)
T cd00829           2 GVGMTPFGR-RSDRSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGL---LGKPATRVEAAG   77 (375)
T ss_pred             eeeecCccc-CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCC---CCcceeeEeCcc
Confidence            555555432 2378899999999999999999999999999999887655456788999999997   478899999999


Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCEEEEEEeecC
Q 013297          118 YGGTAALFNCVNWVESSSWDGRYGLVVCTDSA  149 (446)
Q Consensus       118 ~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~  149 (446)
                      .++..+|..|..+|++|..  +.+||+++|..
T Consensus        78 ~sg~~al~~Aa~~I~sG~~--~~vlv~g~e~~  107 (375)
T cd00829          78 ASGSAAVRAAAAAIASGLA--DVVLVVGAEKM  107 (375)
T ss_pred             HHHHHHHHHHHHHHHhCCC--CEEEEEEEeec
Confidence            9999999999999999976  99999999964

The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.

>PRK09051 beta-ketothiolase; Provisional

Probab=99.42  E-value=1.7e-11  Score=126.00  Aligned_cols=98  Identities=12%  Similarity=0.128  Sum_probs=85.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCC-ccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHH
Q 013297           49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKS-KSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC  127 (446)
Q Consensus        49 ~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~-ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A  127 (446)
                      .+++..+|+.+|++++|+++|+++++||.||+++.++.... +..+..+...+|+  ..++++++++++|++|+.|+..|
T Consensus        23 ~~~~~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl--~~~~p~~~V~~aCaSg~~Al~~A  100 (394)
T PRK09051         23 KDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGV--PQETPAFNVNRLCGSGLQAIVSA  100 (394)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCC--CCCCceEEecccchHHHHHHHHH
Confidence            47789999999999999999999999999999998875533 3455566677787  44689999999999999999999


Q ss_pred             HHHHHcCCCCCCEEEEEEeecCc
Q 013297          128 VNWVESSSWDGRYGLVVCTDSAV  150 (446)
Q Consensus       128 ~~~l~sg~~~~~~aLVVasD~~~  150 (446)
                      ..+|++|.+  +.+||+++|..+
T Consensus       101 ~~~I~sG~~--d~vLvvG~E~mS  121 (394)
T PRK09051        101 AQAILLGDA--DVAIGGGAESMS  121 (394)
T ss_pred             HHHHHcCCC--CEEEEEeehhcc
Confidence            999999987  999999999763

>PRK06064 acetyl-CoA acetyltransferase; Provisional

Probab=99.40  E-value=7e-11  Score=121.46  Aligned_cols=106  Identities=23%  Similarity=0.172  Sum_probs=89.5

Q ss_pred             EeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCC--CccHHHHHHHHhcccCCCCceeeeeC
Q 013297           37 IGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDK--SKSIKTFLMQIFEKFGNTDIEGVDST  114 (446)
Q Consensus        37 ~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~--~ps~a~~l~~~LGl~g~~~~~~~di~  114 (446)
                      .|.++..+.- ..+++..+|+.+|++++|+++|+++++||.|++++.++...  .+..+..++..||+   +..+.++++
T Consensus         7 vG~~~tp~~~-~~~~~~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl---~~~~~~~v~   82 (389)
T PRK06064          7 IGVGQTKFGE-LWDVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGL---APIPATRVE   82 (389)
T ss_pred             EEccccccee-cCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCC---CCCCeeEEe
Confidence            4666554321 24678999999999999999999999999999988765442  36678899999997   467889999


Q ss_pred             CcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeec
Q 013297          115 NACYGGTAALFNCVNWVESSSWDGRYGLVVCTDS  148 (446)
Q Consensus       115 ~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~  148 (446)
                      ++|++++.||..|..+|++|.+  +++||+++|.
T Consensus        83 ~aCasg~~ai~~A~~~I~sG~~--~~vLv~G~e~  114 (389)
T PRK06064         83 AACASGGAALRQAYLAVASGEA--DVVLAAGVEK  114 (389)
T ss_pred             CCcHHHHHHHHHHHHHHHCCCC--CEEEEEEEEe
Confidence            9999999999999999999987  9999999985

>PRK05790 putative acyltransferase; Provisional

Probab=99.39  E-value=5e-11  Score=122.66  Aligned_cols=109  Identities=8%  Similarity=0.095  Sum_probs=87.6

Q ss_pred             EeecceEEecCC---CCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeee
Q 013297           37 IGLGQECMAFCS---EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDS  113 (446)
Q Consensus        37 ~Glg~r~~av~~---~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di  113 (446)
                      .|.++..+....   .+++..+|+.+|++++|+++|++++|||.|++++.++....+..+..++..+|+  ..+++++++
T Consensus         7 vG~~~tp~~r~~g~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl--~~~~~~~~v   84 (393)
T PRK05790          7 VSAARTPIGKFGGALKDVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGL--PVEVPALTI   84 (393)
T ss_pred             EeeecCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCC--CCCCceeee
Confidence            455555443211   258899999999999999999999999999999876543334445556667786  335789999


Q ss_pred             CCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecC
Q 013297          114 TNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA  149 (446)
Q Consensus       114 ~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~  149 (446)
                      .++|+++..||..|..+|++|.+  +.+||+++|..
T Consensus        85 ~~~Casg~~al~~A~~~I~sG~~--d~vLv~G~e~~  118 (393)
T PRK05790         85 NKVCGSGLKAVALAAQAIRAGDA--DIVVAGGQESM  118 (393)
T ss_pred             cccchHHHHHHHHHHHHHHcCCC--CEEEEEeeecc
Confidence            99999999999999999999987  99999998864

>PRK12404 stage V sporulation protein AD; Provisional

Probab=99.33  E-value=1e-10  Score=114.30  Aligned_cols=113  Identities=17%  Similarity=0.162  Sum_probs=88.5

Q ss_pred             CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHH
Q 013297           50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN  129 (446)
Q Consensus        50 ~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~  129 (446)
                      ++...+|+.+|+++||+++|++++|||.+++++.+. ...|  ++++++.||+   +   .+++.+||+++..||.+|..
T Consensus        51 EkAE~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~n-Q~ip--ssfvar~LGI---P---~~gV~gACSTg~eAL~lAa~  121 (334)
T PRK12404         51 EKAERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMN-QITP--TSFAARTLGI---P---YLGLFGACSTSMEGLALAAL  121 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCC-CcCc--HHHHHHHhCC---C---ccceeecCHHHHHHHHHHHH
Confidence            455678999999999999999999999999998883 3343  4599999995   3   48999999999999999999


Q ss_pred             HHHcCCCCCCEEEEEEeecC-------ccCC--CCCC-cc---ccccceeeeeccCC
Q 013297          130 WVESSSWDGRYGLVVCTDSA-------VYAE--GPAR-PT---GGAAAVVMLVGPDA  173 (446)
Q Consensus       130 ~l~sg~~~~~~aLVVasD~~-------~y~~--~~~~-~t---~GdGAvA~Ll~~~~  173 (446)
                      +|++|..  ++|||++|--.       +|..  +.-| +|   -=-||.|+||++..
T Consensus       122 ~VaSG~A--d~VLavtsSH~~~aErqfR~P~eyG~Qrp~taqwTvTgaga~~l~~~~  176 (334)
T PRK12404        122 IVNSGGA--KYVLTGASSHNAAVEKQFRYPTEYGGQKPPTAQWTVTGAGAAILSKTG  176 (334)
T ss_pred             HHHcCCC--CEEEEEeCcccchhhhhccCcccccCcCCCcccEEEEceEEEEEecCC
Confidence            9999987  99999988654       3321  1112 11   23456688998864

>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases

Probab=99.33  E-value=2.1e-10  Score=118.48  Aligned_cols=180  Identities=14%  Similarity=0.099  Sum_probs=117.7

Q ss_pred             CHHHHHHHHHHHHHHHCCCCcCC-cc----EEEEEeccCC----------------------CCC--ccHHHHHHHHhcc
Q 013297           52 DVISMSLTAVTNLLEKYKIDPKQ-IG----RLEVGSETVI----------------------DKS--KSIKTFLMQIFEK  102 (446)
Q Consensus        52 d~~~lA~~Aa~~aL~~agi~~~d-Id----~li~~T~t~~----------------------~~~--ps~a~~l~~~LGl  102 (446)
                      ....|++.|++++|+++|+++++ ++    .++++|..+.                      ...  ...+..|...||+
T Consensus        71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl  150 (407)
T cd00828          71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS  150 (407)
T ss_pred             HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCc
Confidence            45679999999999999987755 33    3455554321                      111  3567789999996


Q ss_pred             cCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCc------c------C-C-----CC--------C
Q 013297          103 FGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV------Y------A-E-----GP--------A  156 (446)
Q Consensus       103 ~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~------y------~-~-----~~--------~  156 (446)
                         .+.+.+.+..+|++++.||..|..+|++|.+  +.+||+++|...      |      . .     ..        +
T Consensus       151 ---~~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~--d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~~~~~~pfd~~~~  225 (407)
T cd00828         151 ---SHGPIKTPVGACATALEALDLAVEAIRSGKA--DIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFDETRD  225 (407)
T ss_pred             ---CCCCCcCcccHHHHHHHHHHHHHHHHHcCCC--CEEEEccccccChHHHHHHHHcCCCCCCCCCCCcccCCCcCCCC
Confidence               2446788999999999999999999999987  999999999753      1      0 0     01        1


Q ss_pred             CccccccceeeeeccCCCc-----ccccccccccccccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhh
Q 013297          157 RPTGGAAAVVMLVGPDAPV-----AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKL  231 (446)
Q Consensus       157 ~~t~GdGAvA~Ll~~~~~~-----~~~~~~~g~~~~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~  231 (446)
                      ....|+||+++||++.+..     .+.-.+.|....  .|-..-   . .+. ++        +.+.++++..+++.   
T Consensus       226 G~~~gEGAaalvLe~~~~A~~rg~~i~a~i~g~~~~--~d~~~~---~-~~~-~~--------~~~~~a~~~Al~~A---  287 (407)
T cd00828         226 GFVEAEGAGVLVLERAELALARGAPIYGRVAGTAST--TDGAGR---S-VPA-GG--------KGIARAIRTALAKA---  287 (407)
T ss_pred             cEEeecceEEEEEeeHHHHHHCCCeEEEEEEEEEec--cCCCCC---C-CCC-Ch--------HHHHHHHHHHHHHc---
Confidence            2457999999999986421     010012222111  110100   0 011 11        23344556666665   


Q ss_pred             hCCCCCcCCCceeeccCcchHHHHHH
Q 013297          232 EGKQFSLSNADYFVFHSPYNKLVQKS  257 (446)
Q Consensus       232 ~~~~~~~~did~~i~H~p~~~~~~~~  257 (446)
                         ++.++|||++..|..+....+..
T Consensus       288 ---gi~~~dId~i~~hgtgt~~~D~~  310 (407)
T cd00828         288 ---GLSLDDLDVISAHGTSTPANDVA  310 (407)
T ss_pred             ---CCCHHHcCEEecccccCccccHH
Confidence               78999999999998887665544

They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.

>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.32  E-value=2.4e-10  Score=118.74  Aligned_cols=227  Identities=14%  Similarity=0.061  Sum_probs=135.6

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhc--CCC---c------ceeEEeec-ceEEecCC----CCCCHHHHHHHHHHHHHH
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHD--GAS---K------GKYTIGLG-QECMAFCS----EVEDVISMSLTAVTNLLE   66 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~---~------~k~~~Glg-~r~~av~~----~~Ed~~~lA~~Aa~~aL~   66 (446)
                      ++|.|.+||...|--. +.+++.+..  |.+   +      ..+...++ +-.. +..    .......|++.|++++|+
T Consensus        11 ~~VvITG~G~vs~~G~-~~~~~~~~L~~G~s~i~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~aa~~Al~   88 (425)
T PRK06501         11 PIVAVTGMGVVTSLGQ-GKADNWAALTAGESGIHTITRFPTEGLRTRIAGTVDF-LPESPFGASALSEALARLAAEEALA   88 (425)
T ss_pred             cCEEEEeeeEECCCCC-CHHHHHHHHHcCCCceEcCCcccccCCCCceEEEEee-cccccccccCHHHHHHHHHHHHHHH
Confidence            3599999999998765 555554432  321   1      11111000 0000 000    111245688999999999


Q ss_pred             HCCCCcCCcc------------------EEEEEeccC---------------CC-------CCccHHHHHHHHhcccCCC
Q 013297           67 KYKIDPKQIG------------------RLEVGSETV---------------ID-------KSKSIKTFLMQIFEKFGNT  106 (446)
Q Consensus        67 ~agi~~~dId------------------~li~~T~t~---------------~~-------~~ps~a~~l~~~LGl~g~~  106 (446)
                      ++|++..+++                  .++.++...               ..       ..++.+..|+..||+    
T Consensus        89 dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl----  164 (425)
T PRK06501         89 QAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSIADRLADRFGT----  164 (425)
T ss_pred             HcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHHHHHHHHHhCC----
Confidence            9998643321                  122222211               11       234678899999997    


Q ss_pred             CceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecC---------------c-cCC-----------CCCCcc
Q 013297          107 DIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA---------------V-YAE-----------GPARPT  159 (446)
Q Consensus       107 ~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~---------------~-y~~-----------~~~~~t  159 (446)
                      +.+++++..+|++++.||..|.++|++|.+  +.+||+++|..               + ..+           ..+..+
T Consensus       165 ~G~~~~i~~aCaS~~~Al~~A~~~I~~G~~--d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~r~G~v  242 (425)
T PRK06501        165 RGLPISLSTACASGATAIQLGVEAIRRGET--DRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKASKPFSKDRDGFV  242 (425)
T ss_pred             CCCceeecCccHHHHHHHHHHHHHHHcCCC--CEEEEeeecccCCHHHHHHHHHhhccccCCCCCCcccCCCCCCCCCee
Confidence            345789999999999999999999999987  99999999941               1 011           112256


Q ss_pred             ccccceeeeeccCCCc-----ccccccccccccccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCC
Q 013297          160 GGAAAVVMLVGPDAPV-----AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGK  234 (446)
Q Consensus       160 ~GdGAvA~Ll~~~~~~-----~~~~~~~g~~~~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~  234 (446)
                      +||||+|+||++.+..     .+...+.++... ...+....     +..++        ..+.+++++.+++.      
T Consensus       243 ~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~-~d~~~~~~-----~~~~~--------~~~~~ai~~AL~~a------  302 (425)
T PRK06501        243 MAEGAGALVLESLESAVARGAKILGIVAGCGEK-ADSFHRTR-----SSPDG--------SPAIGAIRAALADA------  302 (425)
T ss_pred             eeccEEEEEECcHHHHHHCCCeEEEEEEEEEEc-cCCCCCCC-----CCCCH--------HHHHHHHHHHHHHc------
Confidence            8999999999985421     011011222111 01111110     11122        12345555666654      


Q ss_pred             CCCcCCCceeeccCcchHHHHHH
Q 013297          235 QFSLSNADYFVFHSPYNKLVQKS  257 (446)
Q Consensus       235 ~~~~~did~~i~H~p~~~~~~~~  257 (446)
                      ++.++||||+.+|..+....+.+
T Consensus       303 gi~p~dId~i~~Hgtgt~~~d~~  325 (425)
T PRK06501        303 GLTPEQIDYINAHGTSTPENDKM  325 (425)
T ss_pred             CCCHHHcCEEEecCccCcchHHH
Confidence            79999999999999888776654

>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations

Probab=99.31  E-value=2.2e-11  Score=126.11  Aligned_cols=178  Identities=15%  Similarity=0.120  Sum_probs=120.2

Q ss_pred             HHHHHHHHHHHHHHHCCCCcCCccE----EEEEeccCCCC-------------------CccHHHHHHHHhcccCCCCce
Q 013297           53 VISMSLTAVTNLLEKYKIDPKQIGR----LEVGSETVIDK-------------------SKSIKTFLMQIFEKFGNTDIE  109 (446)
Q Consensus        53 ~~~lA~~Aa~~aL~~agi~~~dId~----li~~T~t~~~~-------------------~ps~a~~l~~~LGl~g~~~~~  109 (446)
                      ...|++.|++++|+++|+++++++.    +++++.++++.                   .+..+..+...+|+    ..+
T Consensus        87 ~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl----~g~  162 (421)
T cd00833          87 QQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDL----RGP  162 (421)
T ss_pred             HHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCC----CCC
Confidence            4789999999999999998887774    77777654320                   13467789999997    236


Q ss_pred             eeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCc-------c---------------CCCCCCccccccceee
Q 013297          110 GVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-------Y---------------AEGPARPTGGAAAVVM  167 (446)
Q Consensus       110 ~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-------y---------------~~~~~~~t~GdGAvA~  167 (446)
                      .+.+..+|++++.||..|..+|++|.+  +.+||+++|...       +               +...+..+.||||+|+
T Consensus       163 ~~~v~~acas~~~Al~~A~~~I~~G~~--d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~~g~~~geGAaal  240 (421)
T cd00833         163 SLTVDTACSSSLVALHLACQSLRSGEC--DLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDADADGYVRGEGVGVV  240 (421)
T ss_pred             ceeeccHhHHHHHHHHHHHHHHHcCCC--CeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCCCCCCCeeeeceEEEE
Confidence            788999999999999999999999987  999999999742       0               0111235689999999


Q ss_pred             eeccCCCc-----ccccccccccccccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCCc
Q 013297          168 LVGPDAPV-----AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNAD  242 (446)
Q Consensus       168 Ll~~~~~~-----~~~~~~~g~~~~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~did  242 (446)
                      ||++.+..     .+...+.|....  .|.+...  ...|  +        ...+.++++..+++.      ++.++|||
T Consensus       241 vL~~~~~A~~~g~~~~a~i~g~~~~--~~~~~~~--~~~p--~--------~~~~~~a~~~al~~A------gi~~~did  300 (421)
T cd00833         241 VLKRLSDALRDGDRIYAVIRGSAVN--QDGRTKG--ITAP--S--------GEAQAALIRRAYARA------GVDPSDID  300 (421)
T ss_pred             EEeeHHHHHHCCCeEEEEEEEEEEc--CCCCCCC--CcCC--C--------HHHHHHHHHHHHHHh------CCCHHHCc
Confidence            99976421     000011222111  1111100  0001  1        123345666666665      78999999


Q ss_pred             eeeccCcchHHHHH
Q 013297          243 YFVFHSPYNKLVQK  256 (446)
Q Consensus       243 ~~i~H~p~~~~~~~  256 (446)
                      ++..|..+....+.
T Consensus       301 ~i~~hgtgt~~~D~  314 (421)
T cd00833         301 YVEAHGTGTPLGDP  314 (421)
T ss_pred             EEEeeCCCCCCCCH
Confidence            99999987765443

PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.

>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

Probab=99.28  E-value=1.5e-11  Score=126.32  Aligned_cols=96  Identities=10%  Similarity=0.123  Sum_probs=87.5

Q ss_pred             CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHH
Q 013297           50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN  129 (446)
Q Consensus        50 ~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~  129 (446)
                      +++..+|+.+|++++|+++|++++|||.||+++.++....|..+..++..||+  ..+++++++.++|++++.||..|..
T Consensus        19 ~~~~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl--~~~~~~~~v~~~c~s~~~al~~A~~   96 (386)
T cd00751          19 DVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGL--PESVPATTVNRVCGSGLQAVALAAQ   96 (386)
T ss_pred             CCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCC--CCCCchhhhccccHHHHHHHHHHHH
Confidence            58899999999999999999999999999999887766677788889999997  3457899999999999999999999


Q ss_pred             HHHcCCCCCCEEEEEEeecC
Q 013297          130 WVESSSWDGRYGLVVCTDSA  149 (446)
Q Consensus       130 ~l~sg~~~~~~aLVVasD~~  149 (446)
                      +|++|.+  ++|||+++|..
T Consensus        97 ~I~sG~~--~~vLv~g~e~~  114 (386)
T cd00751          97 SIAAGEA--DVVVAGGVESM  114 (386)
T ss_pred             HHHCCCC--CeEEEeeeecc
Confidence            9999987  99999999976

They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.

>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II

Probab=99.28  E-value=2.3e-10  Score=118.14  Aligned_cols=179  Identities=16%  Similarity=0.151  Sum_probs=115.9

Q ss_pred             HHHHHHHHHHHHHHHCCCCcCCccE----EEEEeccCCC-----------------CCc---------cHHHHHHHHhcc
Q 013297           53 VISMSLTAVTNLLEKYKIDPKQIGR----LEVGSETVID-----------------KSK---------SIKTFLMQIFEK  102 (446)
Q Consensus        53 ~~~lA~~Aa~~aL~~agi~~~dId~----li~~T~t~~~-----------------~~p---------s~a~~l~~~LGl  102 (446)
                      ...|++.|++++|+++|+++++||.    +++++..+..                 ..|         ..+.+|...||+
T Consensus        71 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl  150 (407)
T TIGR03150        71 FIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGA  150 (407)
T ss_pred             HHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCC
Confidence            3679999999999999999988886    6676643211                 011         245678888987


Q ss_pred             cCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCc----------------cCCC-----------C
Q 013297          103 FGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV----------------YAEG-----------P  155 (446)
Q Consensus       103 ~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~----------------y~~~-----------~  155 (446)
                          +.+.+.+..+|++++.||..|..+|++|.+  +.+||+++|...                +...           .
T Consensus       151 ----~g~~~~v~~acaSg~~Al~~A~~~I~~G~~--d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~  224 (407)
T TIGR03150       151 ----KGPNHAVVTACATGTHAIGDAFRLIQRGDA--DVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKDR  224 (407)
T ss_pred             ----CCcccccccHHHHHHHHHHHHHHHHhcCCC--CEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCCC
Confidence                234677788999999999999999999987  999999999621                1100           0


Q ss_pred             CCccccccceeeeeccCCCc-----ccccccccccccccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhh
Q 013297          156 ARPTGGAAAVVMLVGPDAPV-----AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEK  230 (446)
Q Consensus       156 ~~~t~GdGAvA~Ll~~~~~~-----~~~~~~~g~~~~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~  230 (446)
                      +..+.||||+|+||.+.+..     .+...+.|....  .|.+...    .|..++.        ...++++..+++.  
T Consensus       225 ~g~~~gEGAaalvL~~~~~A~~~g~~i~a~i~g~~~~--~d~~~~~----~~~~~~~--------~~~~ai~~Al~~A--  288 (407)
T TIGR03150       225 DGFVMGEGAGVLVLEELEHAKARGAKIYAEIVGYGMS--GDAYHIT----APAPEGE--------GAARAMRAALKDA--  288 (407)
T ss_pred             CcEEEeceEEEEEEeeHHHHHHCCCeEEEEEEEEEEC--CCCCCCC----CCCCCcH--------HHHHHHHHHHHHc--
Confidence            12457999999999976421     000012222111  1111110    0111221        2234555555554  


Q ss_pred             hhCCCCCcCCCceeeccCcchHHHHHH
Q 013297          231 LEGKQFSLSNADYFVFHSPYNKLVQKS  257 (446)
Q Consensus       231 ~~~~~~~~~did~~i~H~p~~~~~~~~  257 (446)
                          +++++|||++..|-.+....+.+
T Consensus       289 ----gi~~~dId~ve~h~tgt~~~D~~  311 (407)
T TIGR03150       289 ----GINPEDVDYINAHGTSTPLGDKA  311 (407)
T ss_pred             ----CCCHhHCCEEeCcCCCCCCCCHH
Confidence                79999999999999888655443

FabB sequences should fall well below the noise cutoff of this model.

>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2

Probab=99.25  E-value=2e-11  Score=108.40  Aligned_cols=105  Identities=19%  Similarity=0.261  Sum_probs=78.6

Q ss_pred             HHHHHHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCcccc
Q 013297          215 MALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQ  294 (446)
Q Consensus       215 ~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~  294 (446)
                      +.++..+..++++.      +++.-|+.+|++|++++++++.+.+.|                        +++.++   
T Consensus        40 ~~i~~~~~~~L~~~------g~~~~~~~~wavHPGG~~ILd~v~~~L------------------------~L~~~~---   86 (151)
T PF02797_consen   40 DNIPPFVEDLLARH------GLSDWDILFWAVHPGGRKILDAVEEAL------------------------GLSPEQ---   86 (151)
T ss_dssp             HHHHHHHHHHHHGG------TCCSGGGSEEEEE-SSHHHHHHHHHHH------------------------TS-GGG---
T ss_pred             HHHHHHHHHHHhhh------cccccccceeeecCChHHHHHHHHHHc------------------------CCCHHH---
Confidence            56677777777765      555456668999999999999999998                        777543   


Q ss_pred             chhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHh---cCCCC---CCCEEEEEEeccccceeeEEE
Q 013297          295 SRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHN---KHSEL---DGKRVVLFSYGSGLTATMFSL  368 (446)
Q Consensus       295 d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~---~~~~~---~G~~vll~syGsG~~~~~~~l  368 (446)
                                         +++|+.+.++||||+|++++..|..+++.   .+...   .++++++++||+|++.+++++
T Consensus        87 -------------------l~~Sr~vLr~yGNmSSaTVlfVL~~~~~~~~~~g~~~~~~g~~~gv~~afGPG~t~E~~lL  147 (151)
T PF02797_consen   87 -------------------LRASREVLREYGNMSSATVLFVLERMRRKSAEEGAPPPGEGGEWGVMLAFGPGLTIEGMLL  147 (151)
T ss_dssp             -------------------GHHHHHHHHHH-B-GGGHHHHHHHHHHHHHHHTTTSBTTTTBSEEEEEEEETTTEEEEEEE
T ss_pred             -------------------HHHHHHHHHhcCCCCCcchHHHHHHHHhhhhhhcccCCCCCCCeEEEEEECCcceEeeEEE
Confidence                               45566667999999999999999999882   12222   248999999999999999999


Q ss_pred             EEe
Q 013297          369 KLS  371 (446)
Q Consensus       369 ~~~  371 (446)
                      |-.
T Consensus       148 r~~  150 (151)
T PF02797_consen  148 RSV  150 (151)
T ss_dssp             EE-
T ss_pred             eeC
Confidence            854

3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A ....

>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases

Probab=99.24  E-value=3.4e-11  Score=123.55  Aligned_cols=96  Identities=13%  Similarity=0.167  Sum_probs=87.0

Q ss_pred             CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHH
Q 013297           50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN  129 (446)
Q Consensus        50 ~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~  129 (446)
                      +++..+|+.+|++++|+++|++++|||.|++++.++....|..+..++..+|+  ..+++++++.++|++++.||..|..
T Consensus        18 ~~t~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl--~~~~~~~~v~~~Casg~~al~~A~~   95 (386)
T TIGR01930        18 DVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGL--PESVPAYTVNRQCASGLQAVILAAQ   95 (386)
T ss_pred             CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCC--CCCceeeeecchhhHHHHHHHHHHH
Confidence            58899999999999999999999999999999887665557778889999998  3458899999999999999999999


Q ss_pred             HHHcCCCCCCEEEEEEeecC
Q 013297          130 WVESSSWDGRYGLVVCTDSA  149 (446)
Q Consensus       130 ~l~sg~~~~~~aLVVasD~~  149 (446)
                      +|++|.+  +++||+++|..
T Consensus        96 ~I~sG~~--~~vLv~g~e~~  113 (386)
T TIGR01930        96 LIRAGEA--DVVVAGGVESM  113 (386)
T ss_pred             HHHCCCC--CEEEEEEehhh
Confidence            9999987  99999999975

This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt

>PRK08256 lipid-transfer protein; Provisional

Probab=99.21  E-value=2.5e-09  Score=110.02  Aligned_cols=105  Identities=22%  Similarity=0.135  Sum_probs=83.3

Q ss_pred             EeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCc
Q 013297           37 IGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNA  116 (446)
Q Consensus        37 ~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~a  116 (446)
                      .|.++..+.......+..+|+.+|++++|+++|+++++||.+++++..+....   ...+...+|+   ..++++++..+
T Consensus         6 vG~~~t~~~~~~~~~~~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~---~~~~~~~lGl---~~~~~~~v~~~   79 (391)
T PRK08256          6 AGVGMTPFEKPGASWDYPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTS---GQRALYEVGM---TGIPIVNVNNN   79 (391)
T ss_pred             EeccccccccCCCCCCHHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcch---hHHHHHHcCC---CCCCCcccccc
Confidence            45665554421225778999999999999999999999999999877654321   2245667886   44677899999


Q ss_pred             ChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecC
Q 013297          117 CYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA  149 (446)
Q Consensus       117 C~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~  149 (446)
                      |++++.||..|..+|++|.+  +.+||+++|..
T Consensus        80 caSg~~ai~~A~~~I~sG~~--d~vLv~g~e~~  110 (391)
T PRK08256         80 CSTGSTALFLARQAVRSGAA--DCALALGFEQM  110 (391)
T ss_pred             cHHHHHHHHHHHHHHHCCCC--CEEEEEEEeec
Confidence            99999999999999999988  99999987754

>PRK12578 acetyl-CoA acetyltransferase; Provisional

Probab=99.21  E-value=1e-10  Score=120.06  Aligned_cols=108  Identities=17%  Similarity=0.155  Sum_probs=91.0

Q ss_pred             EEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCC
Q 013297           36 TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTN  115 (446)
Q Consensus        36 ~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~  115 (446)
                      -.|+|+..+.- ..+++..+|+++|++++|+++|+++++||.||+++.++....+..+..++..||+   ++...+++.+
T Consensus         5 IvG~g~t~~~~-~~~~~~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl---~~~~~~~v~~   80 (385)
T PRK12578          5 VIGVGNSKFGR-RDDVSVQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGL---TGKVPLRVEA   80 (385)
T ss_pred             EEeecccceee-cCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCC---CCCCeeEEec
Confidence            35777765442 3578899999999999999999999999999999877643333457889999997   4456799999


Q ss_pred             cChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecC
Q 013297          116 ACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA  149 (446)
Q Consensus       116 aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~  149 (446)
                      +|++++.||..|...|++|.+  +++|||++|..
T Consensus        81 ~casg~~al~~A~~~I~sG~~--~~vLvvg~e~~  112 (385)
T PRK12578         81 MCATGLAASLTAYTAVASGLV--DMAIAVGVDKM  112 (385)
T ss_pred             cCHHHHHHHHHHHHHHHCCCC--CEEEEEEEeec
Confidence            999999999999999999977  99999999974

>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways

Probab=99.19  E-value=8.8e-12  Score=99.01  Aligned_cols=61  Identities=23%  Similarity=0.199  Sum_probs=50.1

Q ss_pred             eeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCcc-CCCC---CCccccccceeeeeccCC
Q 013297          111 VDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AEGP---ARPTGGAAAVVMLVGPDA  173 (446)
Q Consensus       111 ~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~~~---~~~t~GdGAvA~Ll~~~~  173 (446)
                      ||++++|+|++.||++|..+|++|..  ++||||++|.... .+..   ..++|||||+|+||++++
T Consensus         1 fDi~~~C~g~~~al~~A~~~i~~g~~--~~~Lvv~~d~~s~~~~~~~~~~~~~~gDgAaA~vl~~~~   65 (80)
T PF08545_consen    1 FDINQACAGFLYALDVAAALIASGRA--KNALVVGGDRLSRIVDRTDRQTAFIFGDGAAAVVLSRDE   65 (80)
T ss_dssp             EEEE-GGGHHHHHHHHHHHHHHTTS---SEEEEEEEEEGGGGSHTTHHHHHTTB-EEEEEEEEEEES
T ss_pred             CcccccchHHHHHHHHHHHHHhhccC--CEEEEEeeccccccccccccCcceeecchheEEEEEecC
Confidence            79999999999999999999999966  9999999999843 3322   346799999999999974

The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....

>PRK06445 acetyl-CoA acetyltransferase; Provisional

Probab=99.19  E-value=1.4e-09  Score=112.04  Aligned_cols=94  Identities=10%  Similarity=0.114  Sum_probs=78.0

Q ss_pred             CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCc---cHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHH
Q 013297           50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSK---SIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFN  126 (446)
Q Consensus        50 ~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~p---s~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~  126 (446)
                      +.+..+|+.+|++++|+++|+++++||.+++++..+....+   +....+...++    .+++++++.++|++|..|+..
T Consensus        29 ~~~~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~~~----~~~p~~~V~~~CaSg~~ai~~  104 (394)
T PRK06445         29 NIRPEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLARLP----YNIPAMAVDRQCASSLTTVSI  104 (394)
T ss_pred             CCCHHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcCCC----CCCcchhhhhhhHHHHHHHHH
Confidence            56789999999999999999999999999999988754323   22222333332    468899999999999999999


Q ss_pred             HHHHHHcCCCCCCEEEEEEeecC
Q 013297          127 CVNWVESSSWDGRYGLVVCTDSA  149 (446)
Q Consensus       127 A~~~l~sg~~~~~~aLVVasD~~  149 (446)
                      |...|++|.+  +.+||+++|..
T Consensus       105 A~~~I~sG~~--d~vLv~G~e~m  125 (394)
T PRK06445        105 GAMEIATGMA--DIVIAGGVEHM  125 (394)
T ss_pred             HHHHHHcCCC--CEEEEeeeccc
Confidence            9999999987  99999999955

>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated

Probab=99.19  E-value=1.1e-09  Score=113.28  Aligned_cols=177  Identities=17%  Similarity=0.110  Sum_probs=112.6

Q ss_pred             HHHHHHHHHHHHHHHCCCC---cCCccEEEEEecc---------------CCCCCc---------cHHHHHHHHhcccCC
Q 013297           53 VISMSLTAVTNLLEKYKID---PKQIGRLEVGSET---------------VIDKSK---------SIKTFLMQIFEKFGN  105 (446)
Q Consensus        53 ~~~lA~~Aa~~aL~~agi~---~~dId~li~~T~t---------------~~~~~p---------s~a~~l~~~LGl~g~  105 (446)
                      ...|++.|++++|+++|++   +++|+.++.++..               +....|         ..+.+|...||+.  
T Consensus        80 ~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~--  157 (410)
T PRK07103         80 SAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIR--  157 (410)
T ss_pred             HHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCC--
Confidence            5679999999999999975   4667666543321               111112         2566788899972  


Q ss_pred             CCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecC-c------c-----------CCC-----------CC
Q 013297          106 TDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-V------Y-----------AEG-----------PA  156 (446)
Q Consensus       106 ~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~-~------y-----------~~~-----------~~  156 (446)
                        .+.+.+..+|++++.||..|..+|++|.+  +.+||+++|.. .      +           ...           .+
T Consensus       158 --G~~~tv~~acas~~~Al~~A~~~I~~G~~--d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~~d  233 (410)
T PRK07103        158 --GEGFTVGGASASGQLAVIQAARLVQSGSV--DACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDRD  233 (410)
T ss_pred             --CCcccccchhHHHHHHHHHHHHHHHcCCC--CEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCCCC
Confidence              35677899999999999999999999987  99999998742 1      0           000           01


Q ss_pred             CccccccceeeeeccCCCc-----ccccccccccccccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhh
Q 013297          157 RPTGGAAAVVMLVGPDAPV-----AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKL  231 (446)
Q Consensus       157 ~~t~GdGAvA~Ll~~~~~~-----~~~~~~~g~~~~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~  231 (446)
                      ..+.|+||+|+||++.+..     .+...+.|....  .|-++.    ..|  ++        ....++++..+++.   
T Consensus       234 G~v~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~--~d~~~~----~~p--~~--------~~~~~a~~~Al~~A---  294 (410)
T PRK07103        234 GFIYGEACGAVVLESAESARRRGARPYAKLLGWSMR--LDANRG----PDP--SL--------EGEMRVIRAALRRA---  294 (410)
T ss_pred             CeeEeeeEEEEEEccHHHHHHCCCceEEEEEEEEEe--cCCCCC----CCC--CH--------HHHHHHHHHHHHHc---
Confidence            2457999999999975321     111112332221  111111    011  11        11223445555554   


Q ss_pred             hCCCCCcCCCceeeccCcchHHHHHH
Q 013297          232 EGKQFSLSNADYFVFHSPYNKLVQKS  257 (446)
Q Consensus       232 ~~~~~~~~did~~i~H~p~~~~~~~~  257 (446)
                         ++.++|||++..|..+.+..+..
T Consensus       295 ---gi~~~dId~v~~hgtgt~~~D~~  317 (410)
T PRK07103        295 ---GLGPEDIDYVNPHGTGSPLGDET  317 (410)
T ss_pred             ---CCCHHHCCEEEccCCCCCCCCHH
Confidence               79999999999999888765544

>PRK05656 acetyl-CoA acetyltransferase; Provisional

Probab=99.18  E-value=1.2e-10  Score=119.73  Aligned_cols=99  Identities=11%  Similarity=0.125  Sum_probs=88.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHH
Q 013297           49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV  128 (446)
Q Consensus        49 ~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~  128 (446)
                      .+++..+|+.+|++++|+++|+++++||.||+++.++....+..+..++..+|+  ...+++++++++|++|..|+..|.
T Consensus        22 ~~~~~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl--~~~~p~~~V~~~Casg~~ai~~A~   99 (393)
T PRK05656         22 ANIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGL--PHSVPAMTLNKVCGSGLKALHLAA   99 (393)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCC--CCCcceEEecccchhHHHHHHHHH
Confidence            367899999999999999999999999999999987654456677889999997  334889999999999999999999


Q ss_pred             HHHHcCCCCCCEEEEEEeecCcc
Q 013297          129 NWVESSSWDGRYGLVVCTDSAVY  151 (446)
Q Consensus       129 ~~l~sg~~~~~~aLVVasD~~~y  151 (446)
                      .+|++|..  +.+||+++|..+.
T Consensus       100 ~~I~sG~~--d~vLv~G~E~ms~  120 (393)
T PRK05656        100 QAIRCGDA--EVIIAGGQENMSL  120 (393)
T ss_pred             HHHHcCCC--CEEEEEEEhhhcc
Confidence            99999977  9999999998743

>PRK08313 acetyl-CoA acetyltransferase; Provisional

Probab=99.17  E-value=1.4e-10  Score=118.98  Aligned_cols=107  Identities=17%  Similarity=0.108  Sum_probs=87.9

Q ss_pred             EEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCC--ccHHHHHHHHhcccCCCCceeeee
Q 013297           36 TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKS--KSIKTFLMQIFEKFGNTDIEGVDS  113 (446)
Q Consensus        36 ~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~--ps~a~~l~~~LGl~g~~~~~~~di  113 (446)
                      -.|+|+..+....++++..+|+++|++++|+++|++++|||.|+++| +++...  ...+..|++.||+   ...+++++
T Consensus         7 IvG~g~t~~~~~~~~~s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~-~~~~~~~~~~~~~~va~~LGl---~~~~~~~v   82 (386)
T PRK08313          7 VLGTGQTKYVAKRQDVSMAGLVREAIDRALADAGLTWDDIDAVVVGK-APDFFEGVMMPELFLADALGA---TGKPLIRV   82 (386)
T ss_pred             EEEeecCCcCccCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEec-cccccccccCchHHHHHhcCC---CCCceEEE
Confidence            45787766421235788999999999999999999999999999987 443321  1234689999997   45678999


Q ss_pred             CCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeec
Q 013297          114 TNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDS  148 (446)
Q Consensus       114 ~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~  148 (446)
                      .++|.++..+++.|...|++|.+  ++||||++|.
T Consensus        83 ~~~casg~~al~~A~~~I~sG~~--~~vLVvg~e~  115 (386)
T PRK08313         83 HTAGSVGGSTAVVAASLVQSGVY--RRVLAVAWEK  115 (386)
T ss_pred             eccCHHHHHHHHHHHHHHHCCCC--CEEEEEEEEE
Confidence            99999999999999999999987  9999999985

>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.16  E-value=9.1e-09  Score=106.60  Aligned_cols=229  Identities=16%  Similarity=0.135  Sum_probs=137.5

Q ss_pred             CC-ceeEEeEEEEecCCccccHHHHHHhc--CCC---c-cee-EEeecceEEecC---------CCC----CC-HHHHHH
Q 013297            1 MA-KNVGILAMDIYFPPTCVQQEALEAHD--GAS---K-GKY-TIGLGQECMAFC---------SEV----ED-VISMSL   58 (446)
Q Consensus         1 ~~-~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~---~-~k~-~~Glg~r~~av~---------~~~----Ed-~~~lA~   58 (446)
                      |. ++|-|.|||...|-- .+.+++.+..  |.+   + .++ ...+..+.-...         ++.    -| ...++.
T Consensus         1 m~~~~VvItG~g~~~p~g-~~~~~~w~~L~~g~s~i~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~d~~~~~~l   79 (414)
T PRK08722          1 MSKRRVVVTGMGMLSPVG-NTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKDFNCEEYMSKKDARKMDLFIQYGI   79 (414)
T ss_pred             CCCCCEEEEeeEEECCCC-CCHHHHHHHHHhCCCeeeecCccccccCCCceeEEcCCCChhHcCCHHHHhhcCHHHHHHH
Confidence            44 579999999999987 4666655542  221   1 111 001100100000         000    11 345889


Q ss_pred             HHHHHHHHHCCCCcCCcc----EEEEEeccCCC-----------------CCc---------cHHHHHHHHhcccCCCCc
Q 013297           59 TAVTNLLEKYKIDPKQIG----RLEVGSETVID-----------------KSK---------SIKTFLMQIFEKFGNTDI  108 (446)
Q Consensus        59 ~Aa~~aL~~agi~~~dId----~li~~T~t~~~-----------------~~p---------s~a~~l~~~LGl~g~~~~  108 (446)
                      .|++++|+++|+++.+.+    .|+++|..+..                 ..|         .++.+|...+|+.    -
T Consensus        80 ~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl~----G  155 (414)
T PRK08722         80 AAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLR----G  155 (414)
T ss_pred             HHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCCC----C
Confidence            999999999998754333    35566653311                 011         3678888899973    3


Q ss_pred             eeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCc-------c------C---C---CCCC--------cccc
Q 013297          109 EGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-------Y------A---E---GPAR--------PTGG  161 (446)
Q Consensus       109 ~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-------y------~---~---~~~~--------~t~G  161 (446)
                      +.+.+..+|++++.||..|..+|++|.+  +.+||+++|...       |      .   +   ...+        ...|
T Consensus       156 p~~ti~~aCas~~~Al~~A~~~i~~G~~--d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~~G~~~g  233 (414)
T PRK08722        156 PNIAISTACTTGLHNIGHAARMIAYGDA--DAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDRDGFVLG  233 (414)
T ss_pred             CccccccccHHHHHHHHHHHHHHHcCCC--CEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcCCCCceEee
Confidence            5677889999999999999999999988  999999999741       1      0   0   0112        3469


Q ss_pred             ccceeeeeccCCCc-----ccccccccccc-cccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCC
Q 013297          162 AAAVVMLVGPDAPV-----AFESKLRGSHM-SHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQ  235 (446)
Q Consensus       162 dGAvA~Ll~~~~~~-----~~~~~~~g~~~-~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~  235 (446)
                      |||+++||.+....     .+...+.|... .+...+..|.       .+|.        ....+++..+++.      +
T Consensus       234 EGaaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~-------~~~~--------~~~~a~~~Al~~a------g  292 (414)
T PRK08722        234 DGAGMMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPS-------EDGS--------GGALAMEAAMRDA------G  292 (414)
T ss_pred             ceEEEEEEccHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCC-------cchH--------HHHHHHHHHHHHc------C
Confidence            99999999976421     01001222221 1122222332       1222        1223444455554      7


Q ss_pred             CCcCCCceeeccCcchHHHHHH
Q 013297          236 FSLSNADYFVFHSPYNKLVQKS  257 (446)
Q Consensus       236 ~~~~did~~i~H~p~~~~~~~~  257 (446)
                      ++++|||++..|-.+....+.+
T Consensus       293 i~~~did~ie~hgtgt~~~D~~  314 (414)
T PRK08722        293 VTGEQIGYVNAHGTSTPAGDVA  314 (414)
T ss_pred             CCHHHcCEEEccCccCCCCCHH
Confidence            8999999999999888766654

>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.16  E-value=6.3e-09  Score=106.53  Aligned_cols=223  Identities=14%  Similarity=0.162  Sum_probs=133.6

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhc--CCCc----ceeE--EeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCc--
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHD--GASK----GKYT--IGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDP--   72 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~~----~k~~--~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~--   72 (446)
                      ++|-|.|+|...|--.  .+++.+..  |.+-    ..|.  ....-+...  ....+...++..|++++|+++|+++  
T Consensus         2 ~rVvITG~G~vsp~G~--~~~~~~~l~~G~sgi~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~Al~dagl~~~~   77 (381)
T PRK05952          2 MKVVVTGIGLVSALGD--LEQSWQRLLQGKSGIKLHQPFPELPPLPLGLIG--NQPSSLEDLTKTVVTAALKDAGLTPPL   77 (381)
T ss_pred             CeEEEEeeEEECcccC--HHHHHHHHHcCCCCeEeCCcccccccccceeec--cccccccHHHHHHHHHHHHhcCCCCCC
Confidence            4799999999999886  55544332  3221    0110  000000000  0011233477789999999999864  


Q ss_pred             CCccEEEEEeccCC--------------------CCCc---------cHHHHHHHHhcccCCCCceeeeeCCcChhHHHH
Q 013297           73 KQIGRLEVGSETVI--------------------DKSK---------SIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAA  123 (446)
Q Consensus        73 ~dId~li~~T~t~~--------------------~~~p---------s~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~A  123 (446)
                      ++++ ++++|..+.                    +..|         ..+..|...+|+.    -+.+.+..+|++++.|
T Consensus        78 ~~~G-v~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~----Gp~~ti~~aCasg~~A  152 (381)
T PRK05952         78 TDCG-VVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQ----GPVLAPMAACATGLWA  152 (381)
T ss_pred             CCEE-EEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCC----CccccccchhHHHHHH
Confidence            4554 556664331                    1011         2467788889873    3567788999999999


Q ss_pred             HHHHHHHHHcCCCCCCEEEEEEeecC-c------c------CCC--------CCCccccccceeeeeccCCCc-----cc
Q 013297          124 LFNCVNWVESSSWDGRYGLVVCTDSA-V------Y------AEG--------PARPTGGAAAVVMLVGPDAPV-----AF  177 (446)
Q Consensus       124 L~~A~~~l~sg~~~~~~aLVVasD~~-~------y------~~~--------~~~~t~GdGAvA~Ll~~~~~~-----~~  177 (446)
                      |..|.++|++|..  +.+||.++|.. .      +      ...        .+....|+||+++||++.+..     .+
T Consensus       153 i~~A~~~i~~G~~--d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~rPfd~~r~G~v~gEGaa~lvLe~~~~A~~rg~~i  230 (381)
T PRK05952        153 IAQGVELIQTGQC--QRVIAGAVEAPITPLTLAGFQQMGALAKTGAYPFDRQREGLVLGEGGAILVLESAELAQKRGAKI  230 (381)
T ss_pred             HHHHHHHHHcCCC--CEEEEccccccCCHHHHHHHHhcCCcCCCCCCCCCCCCCCccccccEEEEEEeeHHHHHhCCCce
Confidence            9999999999987  99999999962 1      1      011        122458999999999986421     01


Q ss_pred             cccccccccc-ccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHH
Q 013297          178 ESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQK  256 (446)
Q Consensus       178 ~~~~~g~~~~-~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~  256 (446)
                      ...+.|.... +......|       ..+++        ...++++..+++.      ++.++|||++..|....+..+.
T Consensus       231 ~a~I~g~~~~~d~~~~~~~-------~~~~~--------~~~~ai~~Al~~a------gi~p~dId~i~~hgtgt~~~D~  289 (381)
T PRK05952        231 YGQILGFGLTCDAYHMSAP-------EPDGK--------SAIAAIQQCLARS------GLTPEDIDYIHAHGTATRLNDQ  289 (381)
T ss_pred             EEEEEEEEecCCCCCCCCC-------CCCHH--------HHHHHHHHHHHHh------CCCHHHeeEEEccCCCCCCCcH
Confidence            1112232211 11111111       11222        2234555555655      7899999999999988876655


Q ss_pred             H
Q 013297          257 S  257 (446)
Q Consensus       257 ~  257 (446)
                      +
T Consensus       290 ~  290 (381)
T PRK05952        290 R  290 (381)
T ss_pred             H
Confidence            4

>PRK08235 acetyl-CoA acetyltransferase; Provisional

Probab=99.15  E-value=1.9e-10  Score=118.16  Aligned_cols=98  Identities=8%  Similarity=0.047  Sum_probs=85.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHH
Q 013297           49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV  128 (446)
Q Consensus        49 ~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~  128 (446)
                      .+++..+|+.+|++++|+++|+++++||.||+++.++....+..+..++..+|+  ..++++++++++|++|..||..|.
T Consensus        22 ~~~~~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl--~~~~p~~~V~~~CaSg~~Al~~A~   99 (393)
T PRK08235         22 KDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGI--PWEVQTETVNKVCASGLRAVTLAD   99 (393)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCC--CCCcceeehhhhhhHHHHHHHHHH
Confidence            368899999999999999999999999999999887532233455677889997  457899999999999999999999


Q ss_pred             HHHHcCCCCCCEEEEEEeecCc
Q 013297          129 NWVESSSWDGRYGLVVCTDSAV  150 (446)
Q Consensus       129 ~~l~sg~~~~~~aLVVasD~~~  150 (446)
                      .+|++|.+  +.+||+++|..+
T Consensus       100 ~~I~sG~~--d~vLvvG~E~ms  119 (393)
T PRK08235        100 QIIRAGDA--SVIVAGGMESMS  119 (393)
T ss_pred             HHHHCCCC--CEEEEEeeeccc
Confidence            99999977  999999999774

>PRK06205 acetyl-CoA acetyltransferase; Provisional

Probab=99.13  E-value=2e-10  Score=118.55  Aligned_cols=97  Identities=15%  Similarity=0.161  Sum_probs=89.3

Q ss_pred             CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHH
Q 013297           50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN  129 (446)
Q Consensus        50 ~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~  129 (446)
                      +++..+|+.+|++++|+++|+++++||.|++++.++....+..+..++..+|+  ..+++++++.++|++|..|+..|..
T Consensus        23 ~~~~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl--~~~~p~~~V~~~CaSg~~Al~~A~~  100 (404)
T PRK06205         23 DVPAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGL--PVTVPGMQLDRRCGSGLQAVITAAM  100 (404)
T ss_pred             CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCC--CCCCceeehhhhhhHHHHHHHHHHH
Confidence            68899999999999999999999999999999998877777888889999997  4468899999999999999999999


Q ss_pred             HHHcCCCCCCEEEEEEeecCc
Q 013297          130 WVESSSWDGRYGLVVCTDSAV  150 (446)
Q Consensus       130 ~l~sg~~~~~~aLVVasD~~~  150 (446)
                      +|++|.+  +.+||+++|..+
T Consensus       101 ~I~sG~~--d~vLv~G~E~ms  119 (404)
T PRK06205        101 QVQTGAA--DVVIAGGAESMS  119 (404)
T ss_pred             HHHcCCC--CEEEEeeehhhc
Confidence            9999987  999999999774

>PRK07108 acetyl-CoA acetyltransferase; Provisional

Probab=99.13  E-value=2.4e-10  Score=117.35  Aligned_cols=99  Identities=12%  Similarity=0.134  Sum_probs=89.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCcc-HHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHH
Q 013297           49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKS-IKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC  127 (446)
Q Consensus        49 ~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps-~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A  127 (446)
                      .++...+|+.+|++++|+++|+++++||.||+++.++....++ .+..+...+|+  ..++++++++++|+||..||.+|
T Consensus        23 ~~~~~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl--~~~~p~~~V~~aCaSg~~Al~~A  100 (392)
T PRK07108         23 NMTHGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGL--PVTVPGMTVNRFCSSGLQTIALA  100 (392)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCC--CCCCceeeecchhhHHHHHHHHH
Confidence            4677899999999999999999999999999999887765554 78888899997  45699999999999999999999


Q ss_pred             HHHHHcCCCCCCEEEEEEeecCcc
Q 013297          128 VNWVESSSWDGRYGLVVCTDSAVY  151 (446)
Q Consensus       128 ~~~l~sg~~~~~~aLVVasD~~~y  151 (446)
                      ...|++|.+  +.+||++.|..+.
T Consensus       101 ~~~I~sG~~--d~vlagGvE~ms~  122 (392)
T PRK07108        101 AQRVIAGEG--DVFVAGGVESISC  122 (392)
T ss_pred             HHHHHCCCC--CEEEEEEEeccCC
Confidence            999999977  9999999998853

>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.11  E-value=1.5e-08  Score=104.62  Aligned_cols=224  Identities=12%  Similarity=0.077  Sum_probs=132.8

Q ss_pred             CceeEEeEEEEecCCccccHHHHHHhc--CCCc----ceeE--EeecceEEecCC---------CC-----CCHHHHHHH
Q 013297            2 AKNVGILAMDIYFPPTCVQQEALEAHD--GASK----GKYT--IGLGQECMAFCS---------EV-----EDVISMSLT   59 (446)
Q Consensus         2 ~~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~~----~k~~--~Glg~r~~av~~---------~~-----Ed~~~lA~~   59 (446)
                      .++|-|.|||...|--. +.+++.+..  |.+.    .++.  .++..+.-...+         ..     .....|++.
T Consensus         1 m~~VvITG~g~vtp~G~-~~~~~~~~L~~g~s~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~r~~~~~~~~al~   79 (405)
T PRK09116          1 MRRVVVTGMGGVTALGE-DWQTIAARLKAGRNAVRRMPEWDRYDGLNTRLAAPIDDFELPAHYTRKKIRSMGRVSLMATR   79 (405)
T ss_pred             CCCEEEEeeEEECCCCC-CHHHHHHHHHcCCCCEEeCCchhhccCCCCceEEEecCcChhHhcCHHHHhhCCHHHHHHHH
Confidence            06899999999999874 555554432  2211    0000  011111101000         00     123568999


Q ss_pred             HHHHHHHHCCCCc------CCccEEEEEeccCCC-----------------CC--------c-cHHHHHHHHhcccCCCC
Q 013297           60 AVTNLLEKYKIDP------KQIGRLEVGSETVID-----------------KS--------K-SIKTFLMQIFEKFGNTD  107 (446)
Q Consensus        60 Aa~~aL~~agi~~------~dId~li~~T~t~~~-----------------~~--------p-s~a~~l~~~LGl~g~~~  107 (446)
                      |++++|+++|++.      +++ .++++|..+..                 ..        | ..+.+|...+|+.    
T Consensus        80 aa~~Al~dAGl~~~~~~~~~r~-Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~----  154 (405)
T PRK09116         80 ASELALEDAGLLGDPILTDGRM-GIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFGLK----  154 (405)
T ss_pred             HHHHHHHHcCCCCccccCCCcE-EEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhCCC----
Confidence            9999999999732      233 45566643210                 01        1 2567888899973    


Q ss_pred             ceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCc------c------C---CC---CCC--------cccc
Q 013297          108 IEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV------Y------A---EG---PAR--------PTGG  161 (446)
Q Consensus       108 ~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~------y------~---~~---~~~--------~t~G  161 (446)
                      -+.+.+..+|++++.||..|.++|++|.+  +.+||.++|...      +      .   ..   ..+        ...|
T Consensus       155 Gp~~ti~~acas~~~Al~~A~~~I~~G~~--d~~lvgg~d~~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~~~G~v~g  232 (405)
T PRK09116        155 GRVIPTSSACTSGSQGIGYAYEAIKYGYQ--TVMLAGGAEELCPTEAAVFDTLFATSTRNDAPELTPRPFDANRDGLVIG  232 (405)
T ss_pred             CCcccccchhhhHHHHHHHHHHHHHcCCC--CEEEEecchhcChHHHHHHHHhhhhccCCCCCCCCCCCCcCCCCCEeee
Confidence            35677889999999999999999999988  999999998631      0      0   00   112        3479


Q ss_pred             ccceeeeeccCCCc-----cccccccccccc-ccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCC
Q 013297          162 AAAVVMLVGPDAPV-----AFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQ  235 (446)
Q Consensus       162 dGAvA~Ll~~~~~~-----~~~~~~~g~~~~-~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~  235 (446)
                      +||+++||++.+..     .+...+.|.... +......|         ++        ..+.++++..+++.      +
T Consensus       233 EGa~~~vLe~~~~A~~rga~i~a~i~g~~~~~d~~~~~~p---------~~--------~~~~~ai~~AL~~A------g  289 (405)
T PRK09116        233 EGAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAHVTQP---------QA--------ETMQIAMELALKDA------G  289 (405)
T ss_pred             ccEEEEEEccHHHHHhCCCceEEEEEEEEEcCCCCcCCCC---------CH--------HHHHHHHHHHHHHh------C
Confidence            99999999975321     011112222111 11111112         11        22345556666665      7


Q ss_pred             CCcCCCceeeccCcchHHHHH
Q 013297          236 FSLSNADYFVFHSPYNKLVQK  256 (446)
Q Consensus       236 ~~~~did~~i~H~p~~~~~~~  256 (446)
                      +.++|||++.+|.......+.
T Consensus       290 i~p~dId~I~~Hgtgt~~~D~  310 (405)
T PRK09116        290 LAPEDIGYVNAHGTATDRGDI  310 (405)
T ss_pred             CCHHHcCEEECcCccCCCCCH
Confidence            899999999999877765444

>PRK06059 lipid-transfer protein; Provisional

Probab=99.10  E-value=5e-10  Score=115.52  Aligned_cols=106  Identities=16%  Similarity=0.112  Sum_probs=89.0

Q ss_pred             EeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCC-CccHHHHHHHHhcccCCCCceeeeeCC
Q 013297           37 IGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTN  115 (446)
Q Consensus        37 ~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~-~ps~a~~l~~~LGl~g~~~~~~~di~~  115 (446)
                      .|.+...+.  ..+++..+|+++|++++|+++|+++++||.|++++..+... .+..+.+|++.||+   ..++++++.+
T Consensus         9 vg~~~t~~~--r~~~~~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~---~~~~~~~v~~   83 (399)
T PRK06059          9 LGAGMHPWG--KWGRDFVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGW---NGAPVSSSYA   83 (399)
T ss_pred             EEecccccC--CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCC---CCCceecccc
Confidence            466655533  24678899999999999999999999999999887665433 34567899999996   5577899999


Q ss_pred             cChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecC
Q 013297          116 ACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA  149 (446)
Q Consensus       116 aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~  149 (446)
                      +|++++.||..|..+|++|.+  +++|||++|..
T Consensus        84 ~Casg~~al~~A~~~I~sG~~--~~vLvvg~e~~  115 (399)
T PRK06059         84 ACASGSQALQSARAQILAGLC--DVALVVGADTT  115 (399)
T ss_pred             hhHHHHHHHHHHHHHHHCCCC--CEEEEEEEccc
Confidence            999999999999999999977  99999999965

>PRK09052 acetyl-CoA acetyltransferase; Provisional

Probab=99.10  E-value=4.8e-10  Score=115.39  Aligned_cols=97  Identities=12%  Similarity=0.098  Sum_probs=83.6

Q ss_pred             CCCHHHHHHHHHHHHHHHC-CCCcCCccEEEEEeccCCCCCccHHHHH-HHHhcccCCCCceeeeeCCcChhHHHHHHHH
Q 013297           50 VEDVISMSLTAVTNLLEKY-KIDPKQIGRLEVGSETVIDKSKSIKTFL-MQIFEKFGNTDIEGVDSTNACYGGTAALFNC  127 (446)
Q Consensus        50 ~Ed~~~lA~~Aa~~aL~~a-gi~~~dId~li~~T~t~~~~~ps~a~~l-~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A  127 (446)
                      +++..+|+.+|++++|+++ |+++++||.||+++.+++...+.....+ ...+|+  ...+++++|+++|.+|..|+..|
T Consensus        28 ~~s~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl--~~~~p~~~V~~aCaSg~~Al~~A  105 (399)
T PRK09052         28 NTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGL--PNSVGGVTVNRFCASGLQAVAMA  105 (399)
T ss_pred             CCCHHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCC--CCCCceeeecchhhHHHHHHHHH
Confidence            5789999999999999997 9999999999999888765555555554 445586  33588999999999999999999


Q ss_pred             HHHHHcCCCCCCEEEEEEeecCc
Q 013297          128 VNWVESSSWDGRYGLVVCTDSAV  150 (446)
Q Consensus       128 ~~~l~sg~~~~~~aLVVasD~~~  150 (446)
                      ..+|++|.+  +.+||+++|..+
T Consensus       106 ~~~I~sG~~--d~vLv~G~E~mS  126 (399)
T PRK09052        106 ADRIRVGEA--DVMIAAGVESMS  126 (399)
T ss_pred             HHHHHCCCC--CEEEEEEEeccc
Confidence            999999977  999999999774

>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.07  E-value=1e-08  Score=106.11  Aligned_cols=226  Identities=14%  Similarity=0.128  Sum_probs=137.4

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhc--CCCc----ceeE--------Ee-ec---ceEEecCCCC-----CCHHHHHHH
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHD--GASK----GKYT--------IG-LG---QECMAFCSEV-----EDVISMSLT   59 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~~----~k~~--------~G-lg---~r~~av~~~~-----Ed~~~lA~~   59 (446)
                      ++|.|.+++..+|--. +.+++.+..  |.+.    .++.        .| +.   ...+ + ++.     .....|++.
T Consensus         2 ~~v~ItG~g~~~p~g~-~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~g~i~~f~~~~~-~-~~~~~~~~~~~~~l~~~   78 (411)
T PRK07314          2 RRVVVTGLGAVSPLGN-DVESTWKNLLAGKSGIGPITHFDTSDLAVKIAGEVKDFNPDDY-M-SRKEARRMDRFIQYGIA   78 (411)
T ss_pred             CcEEEEcceEECCCcC-CHHHHHHHHHhCCCcEEECCcccccCCCccEEEEeCCcChhhc-C-CHHHhhcCCHHHHHHHH
Confidence            6899999999999763 666654432  2211    1110        01 00   0000 1 111     124679999


Q ss_pred             HHHHHHHHCCCCcCCcc----EEEEEeccCCC-----------------C--------C-ccHHHHHHHHhcccCCCCce
Q 013297           60 AVTNLLEKYKIDPKQIG----RLEVGSETVID-----------------K--------S-KSIKTFLMQIFEKFGNTDIE  109 (446)
Q Consensus        60 Aa~~aL~~agi~~~dId----~li~~T~t~~~-----------------~--------~-ps~a~~l~~~LGl~g~~~~~  109 (446)
                      |++++|+++|++++++|    .++++|..+..                 .        . ...+.+|...||+.    .+
T Consensus        79 aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~----Gp  154 (411)
T PRK07314         79 AAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGAK----GP  154 (411)
T ss_pred             HHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhCCC----Cc
Confidence            99999999999998888    57777653210                 0        1 12556788899973    34


Q ss_pred             eeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCc-------c---------CC---C--------CCCccccc
Q 013297          110 GVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-------Y---------AE---G--------PARPTGGA  162 (446)
Q Consensus       110 ~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-------y---------~~---~--------~~~~t~Gd  162 (446)
                      .+-+..+|++++.||..|..+|++|.+  +.+||.++|...       +         ..   .        .+....||
T Consensus       155 ~~tv~~acaSgl~Al~~A~~~I~~G~~--d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~dG~~~ge  232 (411)
T PRK07314        155 NHSIVTACATGAHAIGDAARLIAYGDA--DVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDRDGFVMGE  232 (411)
T ss_pred             cccchhhhHHHHHHHHHHHHHHhcCCC--CEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCCCCCEeEEc
Confidence            566778999999999999999999987  999999998631       0         00   0        01245799


Q ss_pred             cceeeeeccCCCc-----ccccccccccccccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCC
Q 013297          163 AAVVMLVGPDAPV-----AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFS  237 (446)
Q Consensus       163 GAvA~Ll~~~~~~-----~~~~~~~g~~~~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~  237 (446)
                      ||+|+||.+.+..     .+...+.|....  .|.+...    .|...+.        ....+++..+++.      +++
T Consensus       233 GAaavvL~~~~~A~~~g~~~~a~I~g~~~~--~d~~~~~----~~~~~~~--------~~~~a~~~Al~~a------gi~  292 (411)
T PRK07314        233 GAGILVLEELEHAKARGAKIYAEVVGYGMT--GDAYHMT----APAPDGE--------GAARAMKLALKDA------GIN  292 (411)
T ss_pred             eEEEEEEeeHHHHHHCCCeEEEEEEEEEEc--CCCCCCC----CCCCCcH--------HHHHHHHHHHHHc------CCC
Confidence            9999999975321     100112222211  1111111    0111221        1123445555554      799


Q ss_pred             cCCCceeeccCcchHHHHHH
Q 013297          238 LSNADYFVFHSPYNKLVQKS  257 (446)
Q Consensus       238 ~~did~~i~H~p~~~~~~~~  257 (446)
                      ++|||++..|-.+....+..
T Consensus       293 ~~dId~v~~hgtgt~~~d~~  312 (411)
T PRK07314        293 PEDIDYINAHGTSTPAGDKA  312 (411)
T ss_pred             HHHCCEEEccccCCccccHH
Confidence            99999999999888666554

>PRK08242 acetyl-CoA acetyltransferase; Validated

Probab=99.07  E-value=7.2e-10  Score=113.95  Aligned_cols=98  Identities=13%  Similarity=0.118  Sum_probs=85.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCC-ccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHH
Q 013297           49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKS-KSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC  127 (446)
Q Consensus        49 ~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~-ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A  127 (446)
                      .+.++.+|+..|++++|+++|+++++||.||+++.++.... +..+......+|+  ..++++++|+++|+||+.||.+|
T Consensus        24 ~~~~~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl--~~~~pa~~Vn~aCaSg~~Ai~~A  101 (402)
T PRK08242         24 HEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGL--PETVPGVQINRFCASGLEAVNLA  101 (402)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCC--CCCCCeEEEcchhhhHHHHHHHH
Confidence            46788999999999999999999999999999999875432 3455566677887  46799999999999999999999


Q ss_pred             HHHHHcCCCCCCEEEEEEeecCc
Q 013297          128 VNWVESSSWDGRYGLVVCTDSAV  150 (446)
Q Consensus       128 ~~~l~sg~~~~~~aLVVasD~~~  150 (446)
                      ..+|++|..  +.+||+++|..+
T Consensus       102 ~~~I~sG~~--d~vLv~G~E~mS  122 (402)
T PRK08242        102 AAKVRSGWD--DLVIAGGVESMS  122 (402)
T ss_pred             HHHHHcCCC--CEEEEEEEEccC
Confidence            999999977  999999999874

>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.07  E-value=7e-09  Score=107.84  Aligned_cols=178  Identities=13%  Similarity=0.085  Sum_probs=114.7

Q ss_pred             HHHHHHHHHHHHHHHCCCCcCCc-c----EEEEEeccCCC---------------------CCc-----cHHHHHHHHhc
Q 013297           53 VISMSLTAVTNLLEKYKIDPKQI-G----RLEVGSETVID---------------------KSK-----SIKTFLMQIFE  101 (446)
Q Consensus        53 ~~~lA~~Aa~~aL~~agi~~~dI-d----~li~~T~t~~~---------------------~~p-----s~a~~l~~~LG  101 (446)
                      ...|++.|++++|+++|++++++ +    .++++|..+..                     ..+     ..+.+|...||
T Consensus        82 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g  161 (424)
T PRK06333         82 FILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYG  161 (424)
T ss_pred             HHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHhC
Confidence            35689999999999999987665 2    46667654321                     011     23567888898


Q ss_pred             ccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCc-------------c----CCC---C------
Q 013297          102 KFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-------------Y----AEG---P------  155 (446)
Q Consensus       102 l~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-------------y----~~~---~------  155 (446)
                      +.    -+.+.+..+|++++.||..|..+|++|.+  +.+||+++|...             +    ...   .      
T Consensus       162 l~----Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~--d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~~Pfd~  235 (424)
T PRK06333        162 FK----GPLGAPVTACAAGVQAIGDAARLIRSGEA--DVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDR  235 (424)
T ss_pred             CC----CCCccccchhHHHHHHHHHHHHHHHcCCC--CEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCCCCCCC
Confidence            72    34567789999999999999999999987  999999999730             1    000   1      


Q ss_pred             --CCccccccceeeeeccCCCc-----cccccccccccc-ccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHH
Q 013297          156 --ARPTGGAAAVVMLVGPDAPV-----AFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSK  227 (446)
Q Consensus       156 --~~~t~GdGAvA~Ll~~~~~~-----~~~~~~~g~~~~-~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~  227 (446)
                        +..+.|+||+++||++....     .+...+.|.... +...+..|       ..++.        ...++++..+++
T Consensus       236 ~~~G~~~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~~~~~-------~~~~~--------~~~~a~~~Al~~  300 (424)
T PRK06333        236 DRDGFVMGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAG-------PEDGE--------GARRAMLIALRQ  300 (424)
T ss_pred             CCCCeEEecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCC-------CCCcH--------HHHHHHHHHHHH
Confidence              12457999999999975321     111112232221 11111111       11232        223445555555


Q ss_pred             hhhhhCCCCCcCCCceeeccCcchHHHHHH
Q 013297          228 YEKLEGKQFSLSNADYFVFHSPYNKLVQKS  257 (446)
Q Consensus       228 ~~~~~~~~~~~~did~~i~H~p~~~~~~~~  257 (446)
                      .      ++.++|||++..|-.+....+..
T Consensus       301 A------gi~p~dId~i~~hgtgt~~~D~~  324 (424)
T PRK06333        301 A------GIPPEEVQHLNAHATSTPVGDLG  324 (424)
T ss_pred             c------CCCHHHCCEEeccCCCCccchHH
Confidence            4      78999999999999888765543

>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed

Probab=99.06  E-value=1.6e-08  Score=104.19  Aligned_cols=137  Identities=17%  Similarity=0.169  Sum_probs=90.9

Q ss_pred             cHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCc--------------------
Q 013297           91 SIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV--------------------  150 (446)
Q Consensus        91 s~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~--------------------  150 (446)
                      ..+.+|+..||+.    -+.+.+..||++++.||..|..+|++|.+  +.+||+++|...                    
T Consensus       138 ~~a~~ia~~lgl~----Gp~~~i~~acas~~~Al~~A~~~I~~G~~--d~vlvgg~d~~~~~~~~~~~~~~~l~~~~~~P  211 (392)
T PRK09185        138 SLADFLRAYLGLS----GPAYTISTACSSSAKVFASARRLLEAGLC--DAAIVGGVDSLCRLTLNGFNSLESLSPQPCRP  211 (392)
T ss_pred             HHHHHHHHHhCCC----CCcccccChhHHHHHHHHHHHHHHHcCCC--CEEEEeeccccChHHHHHHHhccccCCCccCC
Confidence            4678899999972    25778889999999999999999999987  999999998531                    


Q ss_pred             cCCCCCCccccccceeeeeccCCCcccccccccccc-cccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhh
Q 013297          151 YAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHM-SHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYE  229 (446)
Q Consensus       151 y~~~~~~~t~GdGAvA~Ll~~~~~~~~~~~~~g~~~-~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~  229 (446)
                      |+......+.||||+++||++.....+.  +.|.-. .+.+....|       ..++.        ...++++..+++. 
T Consensus       212 fd~~~~G~~~gEGaa~vVLe~~~~~~~~--I~g~g~~~d~~~~~~~-------~~~~~--------~~~~a~~~Al~~A-  273 (392)
T PRK09185        212 FSANRDGINIGEAAAFFLLEREDDAAVA--LLGVGESSDAHHMSAP-------HPEGL--------GAILAMQQALADA-  273 (392)
T ss_pred             CcCCCCccceeceEEEEEEEEcCCCcEE--EEEEEEeCCCCCCCCC-------CCCHH--------HHHHHHHHHHHHc-
Confidence            1111123568999999999987321111  222211 111111111       11221        1223455555554 


Q ss_pred             hhhCCCCCcCCCceeeccCcchHHHHH
Q 013297          230 KLEGKQFSLSNADYFVFHSPYNKLVQK  256 (446)
Q Consensus       230 ~~~~~~~~~~did~~i~H~p~~~~~~~  256 (446)
                           ++.++|||++..|-.+.+..+.
T Consensus       274 -----gl~~~dId~v~~hgtgt~~~D~  295 (392)
T PRK09185        274 -----GLAPADIGYINLHGTATPLNDA  295 (392)
T ss_pred             -----CCCHHHccEEEeCCCCCcCCCH
Confidence                 7999999999999988875553

>PRK08170 acetyl-CoA acetyltransferase; Provisional

Probab=99.05  E-value=9.9e-10  Score=114.15  Aligned_cols=97  Identities=11%  Similarity=0.119  Sum_probs=86.2

Q ss_pred             CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHH
Q 013297           50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN  129 (446)
Q Consensus        50 ~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~  129 (446)
                      +.+..+|+.+|++++|+++|+++++||.||+++.++....+..+..++..+|+  ..++++++++++|++++.|+..|..
T Consensus        24 ~~~~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl--~~~~p~~~v~~~CaSg~~al~~A~~  101 (426)
T PRK08170         24 PFSASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGC--GEKVPAWTVQRNCASGMQALDSAAA  101 (426)
T ss_pred             CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCc--CCCceeeeccchhhHHHHHHHHHHH
Confidence            46899999999999999999999999999999877544445677889999997  4568899999999999999999999


Q ss_pred             HHHcCCCCCCEEEEEEeecCc
Q 013297          130 WVESSSWDGRYGLVVCTDSAV  150 (446)
Q Consensus       130 ~l~sg~~~~~~aLVVasD~~~  150 (446)
                      +|++|.+  +++||+++|..+
T Consensus       102 ~I~sG~~--d~vLv~G~E~ms  120 (426)
T PRK08170        102 NIALGRA--DLVLAGGVEAMS  120 (426)
T ss_pred             HHHCCCC--CEEEEEEEeccc
Confidence            9999977  999999999763

>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional

Probab=99.04  E-value=1.5e-08  Score=105.38  Aligned_cols=177  Identities=15%  Similarity=0.222  Sum_probs=111.8

Q ss_pred             HHHHHHHHHHHHHHHCCCC-cCCccE----EEEEeccCCCC-----------------Cc---------cHHHHHHHHhc
Q 013297           53 VISMSLTAVTNLLEKYKID-PKQIGR----LEVGSETVIDK-----------------SK---------SIKTFLMQIFE  101 (446)
Q Consensus        53 ~~~lA~~Aa~~aL~~agi~-~~dId~----li~~T~t~~~~-----------------~p---------s~a~~l~~~LG  101 (446)
                      ...|++.|++++|+++|++ +++++.    +++++..+...                 .|         ..+.+|...+|
T Consensus        77 ~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~  156 (421)
T PTZ00050         77 ATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKHK  156 (421)
T ss_pred             HHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHhC
Confidence            4789999999999999998 665543    44555432210                 01         24566777888


Q ss_pred             ccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCc-----------------cCCC---CC-----
Q 013297          102 KFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-----------------YAEG---PA-----  156 (446)
Q Consensus       102 l~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-----------------y~~~---~~-----  156 (446)
                      +.    -+.+.+..+|++++.||..|..+|++|.+  +.+||.++|...                 +...   ..     
T Consensus       157 l~----Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~--d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~  230 (421)
T PTZ00050        157 LK----GPSGSAVTACATGAHCIGEAFRWIKYGEA--DIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDK  230 (421)
T ss_pred             CC----CcccccccHhHHHHHHHHHHHHHHHcCCC--CEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcC
Confidence            73    35677889999999999999999999987  999999998621                 0000   11     


Q ss_pred             ---CccccccceeeeeccCCCc-----cccccccccccc-ccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHH
Q 013297          157 ---RPTGGAAAVVMLVGPDAPV-----AFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSK  227 (446)
Q Consensus       157 ---~~t~GdGAvA~Ll~~~~~~-----~~~~~~~g~~~~-~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~  227 (446)
                         ....||||+|+||++....     .+.-.+.|.... +...+..|       ..+|.        ...++++..+++
T Consensus       231 ~~~G~~~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p-------~~~~~--------~~~~ai~~Al~~  295 (421)
T PTZ00050        231 DRAGFVMGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAP-------HPDGR--------GARRCMENALKD  295 (421)
T ss_pred             CCCCEeeccceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCC-------CCChH--------HHHHHHHHHHHh
Confidence               1347999999999986421     110012222211 11111122       11222        223344455555


Q ss_pred             -hhhhhCCCCCcCCCceeeccCcchHHHHH
Q 013297          228 -YEKLEGKQFSLSNADYFVFHSPYNKLVQK  256 (446)
Q Consensus       228 -~~~~~~~~~~~~did~~i~H~p~~~~~~~  256 (446)
                       .      ++.++|||++..|..+..+.+.
T Consensus       296 ~A------gi~~~dId~ie~hgtgt~~~D~  319 (421)
T PTZ00050        296 GA------NININDVDYVNAHATSTPIGDK  319 (421)
T ss_pred             cc------CCChhhCCEEECCCccCCCCCH
Confidence             4      7999999999999888765543

>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed

Probab=99.03  E-value=2.5e-08  Score=103.03  Aligned_cols=163  Identities=14%  Similarity=0.133  Sum_probs=104.4

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhc--CCC---c-cee-EEeecceEEe---cC-----C-----CCCCHHHHHHHHHH
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHD--GAS---K-GKY-TIGLGQECMA---FC-----S-----EVEDVISMSLTAVT   62 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~---~-~k~-~~Glg~r~~a---v~-----~-----~~Ed~~~lA~~Aa~   62 (446)
                      ++|-|.+||...|--. +.+++.+..  |.+   + ..| ..++..+...   +.     +     .-.....|++.|++
T Consensus         2 ~rVvITG~G~vsp~G~-~~~~~w~~l~~G~sgi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~a~~aa~   80 (406)
T PRK07967          2 RRVVITGLGIVSSIGN-NQQEVLASLREGRSGITFSPEFAEMGMRSQVWGNVKLDPTGLIDRKVMRFMGDASAYAYLAME   80 (406)
T ss_pred             CcEEEEcceEECCCCC-CHHHHHHHHHcCCCceeECCcccccCCCCceEEEcCCChhhcCCHHHhhcCCHHHHHHHHHHH
Confidence            6899999999999874 555554432  221   1 111 0111111111   00     0     01224568999999


Q ss_pred             HHHHHCCCCcC-----CccEEEEEeccCCC-----------------C-Cc---------cHHHHHHHHhcccCCCCcee
Q 013297           63 NLLEKYKIDPK-----QIGRLEVGSETVID-----------------K-SK---------SIKTFLMQIFEKFGNTDIEG  110 (446)
Q Consensus        63 ~aL~~agi~~~-----dId~li~~T~t~~~-----------------~-~p---------s~a~~l~~~LGl~g~~~~~~  110 (446)
                      ++|+++|+++.     +++ |+++|..+..                 . .|         ..+.+|...+|+.    -+.
T Consensus        81 ~Al~dAGl~~~~~~~~rvG-v~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~l~----Gp~  155 (406)
T PRK07967         81 QAIADAGLSEEQVSNPRTG-LIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKIK----GVN  155 (406)
T ss_pred             HHHHHcCCCCccCCCCCEE-EEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHCCC----CCc
Confidence            99999998653     343 4455532211                 0 01         2567889999973    345


Q ss_pred             eeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCc------c----------CCC---CCC--------cccccc
Q 013297          111 VDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV------Y----------AEG---PAR--------PTGGAA  163 (446)
Q Consensus       111 ~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~------y----------~~~---~~~--------~t~GdG  163 (446)
                      +.+..+|++++.||..|.++|++|.+  +.+||.++|...      |          ...   ..+        .+.|+|
T Consensus       156 ~tvs~aCas~~~Ai~~A~~~ir~G~~--d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~G~v~gEG  233 (406)
T PRK07967        156 YSISSACATSAHCIGNAVEQIQLGKQ--DIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYDANRDGFVIAGG  233 (406)
T ss_pred             cccccHhHHHHHHHHHHHHHHHcCCC--CEEEEeeecccChHHHHHHHHhhhhccCCCCCCCcCCcCCcCCCCceeeece
Confidence            67899999999999999999999987  999999998641      1          000   112        346999


Q ss_pred             ceeeeeccCC
Q 013297          164 AVVMLVGPDA  173 (446)
Q Consensus       164 AvA~Ll~~~~  173 (446)
                      |+++||++.+
T Consensus       234 aa~lvLe~~~  243 (406)
T PRK07967        234 GGVVVVEELE  243 (406)
T ss_pred             EEEEEEeeHH
Confidence            9999999753

>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.03  E-value=1.5e-08  Score=104.72  Aligned_cols=164  Identities=16%  Similarity=0.140  Sum_probs=106.5

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhc--CCC---c-ceeE-Eee-----cc-eEE---ecCCC-----CCCHHHHHHHHH
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHD--GAS---K-GKYT-IGL-----GQ-ECM---AFCSE-----VEDVISMSLTAV   61 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~---~-~k~~-~Gl-----g~-r~~---av~~~-----~Ed~~~lA~~Aa   61 (446)
                      ++|-|.+||...|--. +.+++.+..  |.+   + ..|. .+.     ++ ..+   .+.++     -.....|++.|+
T Consensus         2 ~~v~ItG~g~vsp~G~-~~~~~~~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~f~~~~~~~~~~~~~~~~~~~l~~~Aa   80 (406)
T PRK08439          2 KRVVVTGIGMINSLGL-NKESSFKAICNGECGIKKITLFDASDFPVQIAGEITDFDPTEVMDPKEVKKADRFIQLGLKAA   80 (406)
T ss_pred             CCEEEEeeEEECCCcC-CHHHHHHHHHcCCCceEeCCCccccCCCCceeEEcCCcChhhcCCHHHHhhcCHHHHHHHHHH
Confidence            6799999999999875 555544432  321   0 1110 000     00 000   00011     112467999999


Q ss_pred             HHHHHHCCCCcCCcc----EEEEEeccCCC-------------------------CCc-cHHHHHHHHhcccCCCCceee
Q 013297           62 TNLLEKYKIDPKQIG----RLEVGSETVID-------------------------KSK-SIKTFLMQIFEKFGNTDIEGV  111 (446)
Q Consensus        62 ~~aL~~agi~~~dId----~li~~T~t~~~-------------------------~~p-s~a~~l~~~LGl~g~~~~~~~  111 (446)
                      +++|+++|+++++++    .+++++..+..                         ..+ ..+.+|...+|+.    -+.+
T Consensus        81 ~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~----Gp~~  156 (406)
T PRK08439         81 REAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGLK----GPNL  156 (406)
T ss_pred             HHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCCC----CCcc
Confidence            999999999877765    34555532210                         011 4677899999983    3457


Q ss_pred             eeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecC-c------c---------CC---C--------CCCccccccc
Q 013297          112 DSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-V------Y---------AE---G--------PARPTGGAAA  164 (446)
Q Consensus       112 di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~-~------y---------~~---~--------~~~~t~GdGA  164 (446)
                      .+..+|++++.||..|.++|++|.+  +.+||+++|.. .      +         ..   .        .+..+.|+||
T Consensus       157 ~~~~acas~~~Al~~A~~~i~~G~~--d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGa  234 (406)
T PRK08439        157 SSVTACAAGTHAIIEAVKTIMLGGA--DKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKDRDGFVMGEGA  234 (406)
T ss_pred             ccccHhHHHHHHHHHHHHHHHcCCC--CEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccCCCCcEEeeCce
Confidence            7789999999999999999999987  99999999963 1      1         00   0        1124579999


Q ss_pred             eeeeeccCC
Q 013297          165 VVMLVGPDA  173 (446)
Q Consensus       165 vA~Ll~~~~  173 (446)
                      +++||++..
T Consensus       235 ~~lvLe~~~  243 (406)
T PRK08439        235 GALVLEEYE  243 (406)
T ss_pred             EEEEEccHH
Confidence            999999753

>PRK06065 acetyl-CoA acetyltransferase; Provisional

Probab=99.01  E-value=1.7e-09  Score=111.02  Aligned_cols=107  Identities=15%  Similarity=0.052  Sum_probs=89.7

Q ss_pred             eEEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCC--CccHHHHHHHHhcccCCCCceeee
Q 013297           35 YTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDK--SKSIKTFLMQIFEKFGNTDIEGVD  112 (446)
Q Consensus        35 ~~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~--~ps~a~~l~~~LGl~g~~~~~~~d  112 (446)
                      +-.|+|+..+.. ..+++..+|+.+|++++|+++|++++|||.+++++. +...  .+..+..+++.||+   ...+.++
T Consensus        12 aIvG~g~t~~~~-~~~~~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~-~~~~~~~~~~a~~l~~~lG~---~~~~~~~   86 (392)
T PRK06065         12 AVIGAGLTLFRR-RLLETPQELAWEAASKALDEAGLELKDIDCVVIGSA-PDAFDGVHMKGEYLSHGSGG---IRKPVSR   86 (392)
T ss_pred             EEEEecccCCcC-CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecc-CCcccccccHHHHHHHHcCC---CCCCeEE
Confidence            456888776543 357889999999999999999999999999999863 3222  45577889999997   3467889


Q ss_pred             eCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeec
Q 013297          113 STNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDS  148 (446)
Q Consensus       113 i~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~  148 (446)
                      +.+||.++..||..|...|++|.+  ++||||++|.
T Consensus        87 V~~~gasG~~al~~A~~~I~sG~a--d~vLVvg~e~  120 (392)
T PRK06065         87 VYVGGATGVMTAIAGWYHVASGLC--QKVLAVAEEK  120 (392)
T ss_pred             EecCchhHHHHHHHHHHHHhCCCC--CEEEEEEeec
Confidence            999999999999999999999988  9999999886

>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

Probab=99.00  E-value=1.7e-09  Score=111.19  Aligned_cols=96  Identities=11%  Similarity=0.052  Sum_probs=83.8

Q ss_pred             CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHH-HHHHHhcccCCCCceeeeeCCcChhHHHHHHHHH
Q 013297           50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKT-FLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV  128 (446)
Q Consensus        50 ~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~-~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~  128 (446)
                      .+.+.+|+.+|++++|+++++++++||.||+++.+++...+..+. .+++.+|+   .++++++++++|++|+.|+..|.
T Consensus        20 ~~~~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~---~~~p~~~V~~~Casg~~al~~A~   96 (393)
T cd00826          20 NDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGL---QEAPAIGMNNLCGSGLRALALAM   96 (393)
T ss_pred             CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCC---CCCcEEEecchhHHHHHHHHHHH
Confidence            467799999999999999999999999999999887654455554 36777774   67899999999999999999999


Q ss_pred             HHHHcCCCCCCEEEEEEeecCc
Q 013297          129 NWVESSSWDGRYGLVVCTDSAV  150 (446)
Q Consensus       129 ~~l~sg~~~~~~aLVVasD~~~  150 (446)
                      .+|++|.+  +.+||+++|..+
T Consensus        97 ~~I~sG~~--~~vlv~g~e~~s  116 (393)
T cd00826          97 QLIAGGDA--NCILAGGFEKME  116 (393)
T ss_pred             HHHHCCCC--CEEEEEeeeccc
Confidence            99999977  999999999863

There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.

>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase

Probab=99.00  E-value=3.7e-08  Score=102.84  Aligned_cols=179  Identities=16%  Similarity=0.122  Sum_probs=114.0

Q ss_pred             HHHHHHHHHHHHHHHCCCCc-----CCccEEEEEeccCCC-----------------CCc---------cHHHHHHHHhc
Q 013297           53 VISMSLTAVTNLLEKYKIDP-----KQIGRLEVGSETVID-----------------KSK---------SIKTFLMQIFE  101 (446)
Q Consensus        53 ~~~lA~~Aa~~aL~~agi~~-----~dId~li~~T~t~~~-----------------~~p---------s~a~~l~~~LG  101 (446)
                      ...|+..|+.++|+++|+++     .+...++++|..+..                 ..|         .++.+|...+|
T Consensus        93 ~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~g  172 (437)
T PLN02836         93 FIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYG  172 (437)
T ss_pred             HHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHhC
Confidence            45689999999999999754     245667777753221                 011         24567888898


Q ss_pred             ccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCc-------c----------CC-----------
Q 013297          102 KFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-------Y----------AE-----------  153 (446)
Q Consensus       102 l~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-------y----------~~-----------  153 (446)
                      +    .-+.+.+.++|++++.||..|..+|++|.+  +.+||.++|...       +          ..           
T Consensus       173 l----~Gp~~tv~~acaSg~~Al~~A~~~I~~G~~--d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~pfd~  246 (437)
T PLN02836        173 F----QGPNHAAVTACATGAHSIGDAFRMIQFGDA--DVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDC  246 (437)
T ss_pred             C----CCceeceeChhHHHHHHHHHHHHHHHcCCC--CEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccccCCccc
Confidence            7    345678889999999999999999999988  899999988631       0          00           


Q ss_pred             CCCCccccccceeeeeccCCCc-----ccccccccccccccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHh
Q 013297          154 GPARPTGGAAAVVMLVGPDAPV-----AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKY  228 (446)
Q Consensus       154 ~~~~~t~GdGAvA~Ll~~~~~~-----~~~~~~~g~~~~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~  228 (446)
                      ..+..+.||||+|+||++.+..     .+...+.|....  .|-+..    .-|..+++        ....+++..+++.
T Consensus       247 ~~~G~~~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~--~d~~~~----~~p~~~~~--------~~~~a~~~Al~~A  312 (437)
T PLN02836        247 DRDGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMS--GDAHHI----TQPHEDGR--------GAVLAMTRALQQS  312 (437)
T ss_pred             CCCCeeeecCEEEEEEeeHHHHHHCCCceEEEEEeeeec--CCCCCC----cCCCcchH--------HHHHHHHHHHHHc
Confidence            0112457999999999976321     000012222211  111110    01211222        1223444555554


Q ss_pred             hhhhCCCCCcCCCceeeccCcchHHHHHH
Q 013297          229 EKLEGKQFSLSNADYFVFHSPYNKLVQKS  257 (446)
Q Consensus       229 ~~~~~~~~~~~did~~i~H~p~~~~~~~~  257 (446)
                            ++.++|||++..|-.+....+..
T Consensus       313 ------gi~~~dId~ve~hgtgt~~~D~~  335 (437)
T PLN02836        313 ------GLHPNQVDYVNAHATSTPLGDAV  335 (437)
T ss_pred             ------CCCHhHcCEEEccCCcCcCcCHH
Confidence                  78999999999999888765543

>PRK06954 acetyl-CoA acetyltransferase; Provisional

Probab=98.98  E-value=2.4e-09  Score=110.26  Aligned_cols=97  Identities=12%  Similarity=0.121  Sum_probs=80.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccC-CCCceeeeeCCcChhHHHHHHHH
Q 013297           49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFG-NTDIEGVDSTNACYGGTAALFNC  127 (446)
Q Consensus        49 ~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g-~~~~~~~di~~aC~gg~~AL~~A  127 (446)
                      .+.+..+|+.+|++++|+++|+++++||.+|+++..+....  .+...+..+++ | +.++++++++++|++|..|+..|
T Consensus        27 ~~~~~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~--~~~~~~~~l~a-g~~~~~p~~~V~~aCaSG~~Av~~A  103 (397)
T PRK06954         27 ASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQG--QAPARQAALGA-GLPLSVGCTTVNKMCGSGMRAAMFA  103 (397)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccc--hHHHHHHHHcC-CCCCCccEeeccccchHHHHHHHHH
Confidence            36778999999999999999999999999999987765432  23333344543 2 33589999999999999999999


Q ss_pred             HHHHHcCCCCCCEEEEEEeecCc
Q 013297          128 VNWVESSSWDGRYGLVVCTDSAV  150 (446)
Q Consensus       128 ~~~l~sg~~~~~~aLVVasD~~~  150 (446)
                      ..+|++|.+  +.+||+++|..+
T Consensus       104 ~~~I~sG~~--d~vLv~G~E~ms  124 (397)
T PRK06954        104 HDMLVAGSV--DVIVAGGMESMT  124 (397)
T ss_pred             HHHHHCCCC--CEEEEEeeeccC
Confidence            999999977  999999999874

>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria

Probab=98.96  E-value=2.3e-08  Score=103.14  Aligned_cols=175  Identities=12%  Similarity=0.037  Sum_probs=112.7

Q ss_pred             HHHHHHHHHHHHHHHCCCCcCCcc----EEEEEeccCCC-----------------CCc---------cHHHHHHHHhcc
Q 013297           53 VISMSLTAVTNLLEKYKIDPKQIG----RLEVGSETVID-----------------KSK---------SIKTFLMQIFEK  102 (446)
Q Consensus        53 ~~~lA~~Aa~~aL~~agi~~~dId----~li~~T~t~~~-----------------~~p---------s~a~~l~~~LGl  102 (446)
                      ...|++.|++++|+++|+++++++    .|+++|..+..                 ..|         ..+.+|...+|+
T Consensus        71 ~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl  150 (399)
T cd00832          71 MTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGM  150 (399)
T ss_pred             HHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCC
Confidence            456899999999999999765443    35666654321                 001         245678888987


Q ss_pred             cCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCc-------c--------CCC---CC--------
Q 013297          103 FGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-------Y--------AEG---PA--------  156 (446)
Q Consensus       103 ~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-------y--------~~~---~~--------  156 (446)
                      .    -+++.+..+|++++.||..|.++|++|  . +.+||.++|...       +        ...   ..        
T Consensus       151 ~----Gp~~ti~~acaS~~~Al~~A~~~i~~G--~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~~~~  223 (399)
T cd00832         151 R----GPSGVVVAEQAGGLDALAQARRLVRRG--T-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAAA  223 (399)
T ss_pred             C----CCcccccchhHHHHHHHHHHHHHHHcC--C-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcCCCC
Confidence            3    345677899999999999999999999  5 799999998731       1        000   11        


Q ss_pred             CccccccceeeeeccCCCc-----ccccccccccccccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhh
Q 013297          157 RPTGGAAAVVMLVGPDAPV-----AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKL  231 (446)
Q Consensus       157 ~~t~GdGAvA~Ll~~~~~~-----~~~~~~~g~~~~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~  231 (446)
                      ..+.|+||+++||++....     .+.-.+.|....  .|-...      +. .        ...+.++++..++..   
T Consensus       224 G~~~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~--~d~~~~------~~-~--------~~~~~~a~~~al~~a---  283 (399)
T cd00832         224 GYVPGEGGAILVLEDAAAARERGARVYGEIAGYAAT--FDPPPG------SG-R--------PPGLARAIRLALADA---  283 (399)
T ss_pred             CEeeeceEEEEEEeeHHHHHHCCCeEEEEEEeEEEc--CCCCCC------CC-C--------HHHHHHHHHHHHHHc---
Confidence            2357999999999986421     111112232221  110100      00 1        123345555666654   


Q ss_pred             hCCCCCcCCCceeeccCcchHHHHHH
Q 013297          232 EGKQFSLSNADYFVFHSPYNKLVQKS  257 (446)
Q Consensus       232 ~~~~~~~~did~~i~H~p~~~~~~~~  257 (446)
                         ++.+++|||+..|....+..+..
T Consensus       284 ---g~~~~~i~~v~~hgtgt~~~D~~  306 (399)
T cd00832         284 ---GLTPEDVDVVFADAAGVPELDRA  306 (399)
T ss_pred             ---CCCHHHccEEEeccCcCCCCCHH
Confidence               79999999999998777655543

CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.

>PRK06158 thiolase; Provisional

Probab=98.95  E-value=4.6e-09  Score=107.77  Aligned_cols=101  Identities=10%  Similarity=-0.029  Sum_probs=84.6

Q ss_pred             eEEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeC
Q 013297           35 YTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST  114 (446)
Q Consensus        35 ~~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~  114 (446)
                      +-.|+|+..+.- .++++..+|+.+|++++|+++|++++|||.|++++..  +..|+  ..|++.||+   +..+.+++.
T Consensus        11 aIvG~g~t~~~~-~~~~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~--~~~~~--~~la~~lGl---~~~~~~~~~   82 (384)
T PRK06158         11 AIVGAATAGLGE-APGLSAMELLAQAAHRALADAGLTMADVDGLFTASPD--DALWG--LSVAEYLGI---RPRFVDGTM   82 (384)
T ss_pred             EEEEeeecccee-CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCC--CCCcH--HHHHHHcCC---CCeeecccc
Confidence            356888876542 3578999999999999999999999999999998743  22333  579999997   456778888


Q ss_pred             CcChhHHHHHHHHHHHHHcCCCCCCEEEEEE
Q 013297          115 NACYGGTAALFNCVNWVESSSWDGRYGLVVC  145 (446)
Q Consensus       115 ~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVa  145 (446)
                      ++|+++..+|..|..+|++|.+  ++|||+.
T Consensus        83 ~g~~s~~~al~~A~~~I~sG~~--d~vLV~~  111 (384)
T PRK06158         83 IGGSSFLAHLLPAALALEAGLC--DVALICY  111 (384)
T ss_pred             CccHHHHHHHHHHHHHHHcCCC--CEEEEee
Confidence            9999999999999999999987  9999983

>PRK06690 acetyl-CoA acetyltransferase; Provisional

Probab=98.95  E-value=4.4e-08  Score=99.45  Aligned_cols=92  Identities=13%  Similarity=0.165  Sum_probs=77.1

Q ss_pred             CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHH
Q 013297           50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN  129 (446)
Q Consensus        50 ~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~  129 (446)
                      +..+.+|+..|.+.+++  |++ ++||.+++++..+..  ...+..+...+|+  ...++++.+.++|++++.|+..|..
T Consensus        22 ~~~~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~~--~~~~r~~~~~~Gl--~~~~p~~tV~~~CaSG~~Ai~~a~~   94 (361)
T PRK06690         22 DYEVQQLAAPLLTFLSK--GME-REIDDVILGNVVGPG--GNVARLSALEAGL--GLHIPGVTIDRQCGAGLEAIRTACH   94 (361)
T ss_pred             CCCHHHHHHHHHHHHHc--cch-hhcCEEEEEecCCCc--chHHHHHHHHcCC--CCCCCceehhhhhhHHHHHHHHHHH
Confidence            45689999999999866  786 899999999876542  3344457788887  4478999999999999999999999


Q ss_pred             HHHcCCCCCCEEEEEEeecCc
Q 013297          130 WVESSSWDGRYGLVVCTDSAV  150 (446)
Q Consensus       130 ~l~sg~~~~~~aLVVasD~~~  150 (446)
                      +|++|..  +.+||++.|..+
T Consensus        95 ~I~sG~~--d~~l~gG~E~ms  113 (361)
T PRK06690         95 FIQGGAG--KCYIAGGVESTS  113 (361)
T ss_pred             HHHCCCC--CEEEEecccccc
Confidence            9999977  999999999773

>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II

Probab=98.94  E-value=5e-08  Score=103.79  Aligned_cols=227  Identities=16%  Similarity=0.189  Sum_probs=135.7

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhc--CC---Cc-ce-----eEEee-cc-eEEe---cCCC----CCC-HHHHHHHHH
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHD--GA---SK-GK-----YTIGL-GQ-ECMA---FCSE----VED-VISMSLTAV   61 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~---~~-~k-----~~~Gl-g~-r~~a---v~~~----~Ed-~~~lA~~Aa   61 (446)
                      +.|.|.|||...|-- .+.+++.+..  |.   .+ ++     |..-+ ++ +.+.   +.++    .-| ...|++.|+
T Consensus       129 ~rVvITG~G~vtp~G-~~~~~~w~~L~~G~s~i~~~~~f~~~~~~~~~ag~i~~f~~~~~l~~k~~r~md~~~~~al~Aa  207 (540)
T PLN02787        129 RRVVVTGMGVVSPLG-HDPDVFYNNLLEGVSGISEIERFDCSQFPTRIAGEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG  207 (540)
T ss_pred             CCEEEEeeEEECCCC-CCHHHHHHHHHcCCCcccccCccchhhCCccccccccccChhhcCCHHHHHhCCHHHHHHHHHH
Confidence            479999999999986 4666654433  22   11 11     10000 00 0000   0011    112 346889999


Q ss_pred             HHHHHHCCCCcCC---c----cEEEEEeccCCC----------------CCc---------cHHHHHHHHhcccCCCCce
Q 013297           62 TNLLEKYKIDPKQ---I----GRLEVGSETVID----------------KSK---------SIKTFLMQIFEKFGNTDIE  109 (446)
Q Consensus        62 ~~aL~~agi~~~d---I----d~li~~T~t~~~----------------~~p---------s~a~~l~~~LGl~g~~~~~  109 (446)
                      +++|+++|++++.   +    -.|+++|..+..                ..|         ..+.+|...+|+.    -+
T Consensus       208 ~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~~gl~----Gp  283 (540)
T PLN02787        208 KKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLGWM----GP  283 (540)
T ss_pred             HHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHHhCCC----CC
Confidence            9999999987542   2    145677754321                001         2356788888873    35


Q ss_pred             eeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecC-c------c---------CCC---CCC--------ccccc
Q 013297          110 GVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-V------Y---------AEG---PAR--------PTGGA  162 (446)
Q Consensus       110 ~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~-~------y---------~~~---~~~--------~t~Gd  162 (446)
                      .+.+..||++++.||..|..+|++|.+  +.+||.++|.. .      +         .+.   ..+        .+.|+
T Consensus       284 ~~tistACASs~~Ai~~A~~~Ir~G~a--D~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD~~rdGfv~GE  361 (540)
T PLN02787        284 NYSISTACATSNFCILNAANHIIRGEA--DVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWDMNRDGFVMGE  361 (540)
T ss_pred             ccccccccccHHHHHHHHHHHHHcCCC--CEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCcccCCCCccccc
Confidence            677889999999999999999999988  99999999963 1      1         000   112        35799


Q ss_pred             cceeeeeccCCCc-----ccccccccccc-cccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCC
Q 013297          163 AAVVMLVGPDAPV-----AFESKLRGSHM-SHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQF  236 (446)
Q Consensus       163 GAvA~Ll~~~~~~-----~~~~~~~g~~~-~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~  236 (446)
                      ||+++||++.+..     .+...+.|... .+.+....|       ..+|+-        +..+++..+++.      ++
T Consensus       362 GAa~lVLE~~e~A~~rGa~IyA~I~G~g~s~Da~~~t~p-------~p~g~g--------~~~am~~AL~~A------Gl  420 (540)
T PLN02787        362 GAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEP-------HPEGAG--------VILCIEKALAQS------GV  420 (540)
T ss_pred             ceEEEEEeeHHHHHHCCCeeEEEEEEEEEecCCCCCCCC-------CcCHHH--------HHHHHHHHHHHc------CC
Confidence            9999999975321     11111233221 122222222       223422        223555555554      79


Q ss_pred             CcCCCceeeccCcchHHHHHH
Q 013297          237 SLSNADYFVFHSPYNKLVQKS  257 (446)
Q Consensus       237 ~~~did~~i~H~p~~~~~~~~  257 (446)
                      .++||||+..|...++..+..
T Consensus       421 ~p~dIdyInaHGTGT~~gD~~  441 (540)
T PLN02787        421 SKEDVNYINAHATSTKAGDLK  441 (540)
T ss_pred             CHHHCcEEEccCccCCCCCHH
Confidence            999999999999877765543

>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2

Probab=98.94  E-value=4.4e-09  Score=102.42  Aligned_cols=98  Identities=18%  Similarity=0.141  Sum_probs=85.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHH
Q 013297           49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV  128 (446)
Q Consensus        49 ~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~  128 (446)
                      .+.+..+|+..|++.+|+++++++++||.|++|+..+....+.++..+.-..|+  +..++++.++++|.+|..|+..|.
T Consensus        22 ~~~~~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl--~~~vp~~~V~~~CaSG~~Av~~a~   99 (264)
T PF00108_consen   22 ADVSPEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGL--PESVPATTVNRACASGLQAVHLAA   99 (264)
T ss_dssp             TTS-HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS---TTSEEEEEE-GGGHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhccc--ccccceeeehhhhhHHHHHHHHhh
Confidence            467899999999999999999999999999999988866677778888888898  678899999999999999999999


Q ss_pred             HHHHcCCCCCCEEEEEEeecCc
Q 013297          129 NWVESSSWDGRYGLVVCTDSAV  150 (446)
Q Consensus       129 ~~l~sg~~~~~~aLVVasD~~~  150 (446)
                      ..|++|..  +.+|+++.|..+
T Consensus       100 ~~I~sG~~--dvvlagGvE~mS  119 (264)
T PF00108_consen  100 MAIASGEA--DVVLAGGVESMS  119 (264)
T ss_dssp             HHHHTTS---SEEEEEEEEETT
T ss_pred             hhhcCCCc--cEEEEecccccc
Confidence            99999977  999999999984

3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....

>PRK07516 acetyl-CoA acetyltransferase; Provisional

Probab=98.92  E-value=8.9e-09  Score=105.89  Aligned_cols=107  Identities=17%  Similarity=0.157  Sum_probs=84.1

Q ss_pred             EeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCC--CCccHHHHHHHHhcccCCCCceeeeeC
Q 013297           37 IGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVID--KSKSIKTFLMQIFEKFGNTDIEGVDST  114 (446)
Q Consensus        37 ~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~--~~ps~a~~l~~~LGl~g~~~~~~~di~  114 (446)
                      .|.++..+.. ..+++..+|+.+|++++|+++|+++++||.|++++..+..  ..+..+..+...+|+   ..+++++++
T Consensus         7 vg~g~tpfgr-~~~~~~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl---~~~p~~~v~   82 (389)
T PRK07516          7 VGWAHTPFGK-LDAETLESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPAL---RFKPATRVE   82 (389)
T ss_pred             EeCCcceeee-cCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCC---CCCceeeec
Confidence            4666655543 3578899999999999999999999999999998764321  111122233344564   567899999


Q ss_pred             CcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecC
Q 013297          115 NACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA  149 (446)
Q Consensus       115 ~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~  149 (446)
                      ++|++++.||..|..+|++|.+  +++||+++|..
T Consensus        83 ~~CaSg~~Al~~A~~~I~sG~~--d~vLvvg~e~~  115 (389)
T PRK07516         83 NACATGSAAVYAALDAIEAGRA--RIVLVVGAEKM  115 (389)
T ss_pred             cccHHHHHHHHHHHHHHHCCCC--CEEEEEEehhh
Confidence            9999999999999999999987  99999999985

>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional

Probab=98.91  E-value=1e-07  Score=96.18  Aligned_cols=178  Identities=12%  Similarity=0.030  Sum_probs=113.8

Q ss_pred             HHHHHHHHHHHHHHHCCC--CcCCccEEEEEeccCCC-----------------CCc---------cHHHHHHHHhcccC
Q 013297           53 VISMSLTAVTNLLEKYKI--DPKQIGRLEVGSETVID-----------------KSK---------SIKTFLMQIFEKFG  104 (446)
Q Consensus        53 ~~~lA~~Aa~~aL~~agi--~~~dId~li~~T~t~~~-----------------~~p---------s~a~~l~~~LGl~g  104 (446)
                      ...++..|++++|+++|+  ++++++.+ ++|..+..                 ..|         ..+.+|...+|+. 
T Consensus         4 ~~~~~~~a~~~a~~~a~~~~~~~r~Gv~-~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~-   81 (342)
T PRK14691          4 WWRYKWITFHPSLTHADNTEKQERTATI-IGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFK-   81 (342)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCcccEEEE-EecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCC-
Confidence            456899999999999995  56677655 45543221                 011         3567788888873 


Q ss_pred             CCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecC-c------c----------CC---CCCC-------
Q 013297          105 NTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-V------Y----------AE---GPAR-------  157 (446)
Q Consensus       105 ~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~-~------y----------~~---~~~~-------  157 (446)
                         -+.+.+..+|++++.||..|.++|+.|..  +.+||.++|.. .      +          .+   ...+       
T Consensus        82 ---Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~--d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~  156 (342)
T PRK14691         82 ---GPIGAPVTACAAGVQAIGDAVRMIRNNEA--DVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTARD  156 (342)
T ss_pred             ---CCccccccHhHHHHHHHHHHHHHHHcCCC--CEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCCC
Confidence               35677889999999999999999999988  99999999863 1      1          00   0112       


Q ss_pred             -ccccccceeeeeccCCCc-----ccccccccccccccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhh
Q 013297          158 -PTGGAAAVVMLVGPDAPV-----AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKL  231 (446)
Q Consensus       158 -~t~GdGAvA~Ll~~~~~~-----~~~~~~~g~~~~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~  231 (446)
                       .+.||||+++||++....     .+...+.|....  .|-+...  .  |..++        .....+++..+++.   
T Consensus       157 G~v~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~~~--~d~~~~~--~--p~p~~--------~~~~~ai~~AL~~A---  219 (342)
T PRK14691        157 GFVMGEGAGLLIIEELEHALARGAKPLAEIVGYGTS--ADAYHMT--S--GAEDG--------DGAYRAMKIALRQA---  219 (342)
T ss_pred             CccccceEEEEEEeeHHHHHhCCCCceEEEEEEEEE--cCCCCCC--C--CCCCH--------HHHHHHHHHHHHHc---
Confidence             347999999999975421     010112222211  1111110  0  11112        22233555555665   


Q ss_pred             hCCCCCcCCCceeeccCcchHHHHHH
Q 013297          232 EGKQFSLSNADYFVFHSPYNKLVQKS  257 (446)
Q Consensus       232 ~~~~~~~~did~~i~H~p~~~~~~~~  257 (446)
                         +++++|||++..|-.+.+..+.+
T Consensus       220 ---gl~p~dIdyIeaHgtgT~~~D~~  242 (342)
T PRK14691        220 ---GITPEQVQHLNAHATSTPVGDLG  242 (342)
T ss_pred             ---CCCHHHCCEEEecCCCCcCCCHH
Confidence               78999999999999888876554

>PRK06289 acetyl-CoA acetyltransferase; Provisional

Probab=98.91  E-value=6.9e-09  Score=107.21  Aligned_cols=94  Identities=16%  Similarity=0.141  Sum_probs=76.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCC-----ccHHHHHHHHhcccCCCCceeeeeCCcChhHHHH
Q 013297           49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKS-----KSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAA  123 (446)
Q Consensus        49 ~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~-----ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~A  123 (446)
                      .+++..+|+.+|++++|+++|+++++||.+|+++++++...     +.....  ...++   ..++++++.++|.+++.|
T Consensus        22 ~~~s~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~--~~~~~---~g~~~~~v~~~Casg~~a   96 (403)
T PRK06289         22 EGRDFADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPAT--VHPAL---WGVPASRHEAACASGSVA   96 (403)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHH--HhhcC---CCCceeecccccHHHHHH
Confidence            57889999999999999999999999999999988765322     111111  22243   245789999999999999


Q ss_pred             HHHHHHHHHcCCCCCCEEEEEEeecC
Q 013297          124 LFNCVNWVESSSWDGRYGLVVCTDSA  149 (446)
Q Consensus       124 L~~A~~~l~sg~~~~~~aLVVasD~~  149 (446)
                      |..|..+|++|.+  ++|||+++|..
T Consensus        97 l~~Aa~~I~sG~~--~~VLvvg~e~~  120 (403)
T PRK06289         97 TLAAMADLRAGRY--DVALVVGVELM  120 (403)
T ss_pred             HHHHHHHHHcCCC--CEEEEEEEEec
Confidence            9999999999987  99999999974

>PLN02287 3-ketoacyl-CoA thiolase

Probab=98.87  E-value=1.2e-08  Score=106.39  Aligned_cols=98  Identities=11%  Similarity=0.151  Sum_probs=84.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCcc-HHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHH
Q 013297           49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKS-IKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC  127 (446)
Q Consensus        49 ~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps-~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A  127 (446)
                      .+.+..+|+.+|++++|+++|++++|||.|++++.++....+. .+..+...+|+  ...++++++..+|.+|..|+..|
T Consensus        67 ~~~s~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl--~~~~pa~~V~~~CaSG~~Ai~~A  144 (452)
T PLN02287         67 KDTYPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGF--PETVPVRTVNRQCSSGLQAVADV  144 (452)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCC--CCCcceEEEeccCchHHHHHHHH
Confidence            3688999999999999999999999999999998876554444 34456677787  44588999999999999999999


Q ss_pred             HHHHHcCCCCCCEEEEEEeecCc
Q 013297          128 VNWVESSSWDGRYGLVVCTDSAV  150 (446)
Q Consensus       128 ~~~l~sg~~~~~~aLVVasD~~~  150 (446)
                      ...|++|.+  +.+||++.|..+
T Consensus       145 a~~I~sG~~--dvvLv~GvE~mS  165 (452)
T PLN02287        145 AAAIKAGFY--DIGIGAGVESMT  165 (452)
T ss_pred             HHHHHcCCC--CeEEEEeEEecC
Confidence            999999977  999999999763

>PRK07661 acetyl-CoA acetyltransferase; Provisional

Probab=98.86  E-value=1.3e-08  Score=104.56  Aligned_cols=97  Identities=8%  Similarity=0.017  Sum_probs=84.7

Q ss_pred             CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCC-CccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHH
Q 013297           50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV  128 (446)
Q Consensus        50 ~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~-~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~  128 (446)
                      +.+..+|+.+|++++|+++|+.+++||.+++++.++... .+.++.+++..+|+  ...++++.+.++|++|..|+..|.
T Consensus        24 ~~~~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl--~~~~p~~~V~~aCaSG~~Al~~A~  101 (391)
T PRK07661         24 TVRPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGL--PYTVPAITINRYCSSGLQSIAYGA  101 (391)
T ss_pred             CCCHHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCC--CCCcceeehhhhhhHHHHHHHHHH
Confidence            457899999999999999988789999999997775433 36677789999997  335899999999999999999999


Q ss_pred             HHHHcCCCCCCEEEEEEeecCc
Q 013297          129 NWVESSSWDGRYGLVVCTDSAV  150 (446)
Q Consensus       129 ~~l~sg~~~~~~aLVVasD~~~  150 (446)
                      ..|++|.+  +.+||+++|..+
T Consensus       102 ~~I~sG~~--d~vLv~G~E~ms  121 (391)
T PRK07661        102 ERIMLGHS--EAVIAGGAESMS  121 (391)
T ss_pred             HHHHcCCC--CEEEEEEEeecc
Confidence            99999987  999999999764

>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=98.82  E-value=2.9e-07  Score=95.50  Aligned_cols=176  Identities=11%  Similarity=0.124  Sum_probs=109.9

Q ss_pred             HHHHHHHHHHHHHHCCC---CcCCccEEEEEeccCCC-----------------CCc---------cHHHHHHHHhcccC
Q 013297           54 ISMSLTAVTNLLEKYKI---DPKQIGRLEVGSETVID-----------------KSK---------SIKTFLMQIFEKFG  104 (446)
Q Consensus        54 ~~lA~~Aa~~aL~~agi---~~~dId~li~~T~t~~~-----------------~~p---------s~a~~l~~~LGl~g  104 (446)
                      .-|++.|++++|+++|+   ++++++. +++|..+..                 ..|         ..+.++...+|+. 
T Consensus        84 ~~~~l~aa~~AledAg~~~~~~~r~Gv-~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~-  161 (418)
T PRK07910         84 QRMSTVLGRRVWENAGSPEVDTNRLMV-SIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAK-  161 (418)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCcccEEE-EEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCCC-
Confidence            45889999999999996   4555654 455543211                 001         2455677777762 


Q ss_pred             CCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecC-c------c-------C------CCCCC-------
Q 013297          105 NTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-V------Y-------A------EGPAR-------  157 (446)
Q Consensus       105 ~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~-~------y-------~------~~~~~-------  157 (446)
                         -+.+.+..+|++++.||..|.++|++|.+  +.+||.++|.. .      |       .      .+..+       
T Consensus       162 ---G~~~ti~taCaS~~~Al~~A~~~I~~G~~--d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd~~~~  236 (418)
T PRK07910        162 ---AGVITPVSACASGSEAIAQAWRQIVLGEA--DIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDRD  236 (418)
T ss_pred             ---CCcccccchhHHHHHHHHHHHHHHHcCCC--CEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCcCCCC
Confidence               24567789999999999999999999987  99999999973 1      1       0      01112       


Q ss_pred             -ccccccceeeeeccCCCc-----cccccccccccc-ccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhh
Q 013297          158 -PTGGAAAVVMLVGPDAPV-----AFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEK  230 (446)
Q Consensus       158 -~t~GdGAvA~Ll~~~~~~-----~~~~~~~g~~~~-~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~  230 (446)
                       ...|+||+++||++....     .+...+.|+... +.+.+..|.       .+|.        ...++++..+++.  
T Consensus       237 G~v~gEGaa~vvLe~~~~A~~rg~~i~a~i~g~~~~~dg~~~~~~~-------~~~~--------~~~~a~~~Al~~a--  299 (418)
T PRK07910        237 GFVFGEGGALMVIETEEHAKARGANILARIMGASITSDGFHMVAPD-------PNGE--------RAGHAMTRAIELA--  299 (418)
T ss_pred             CEeeeceEEEEEEeeHHHHHhCCCcEEEEEEEEEEecCCCCCCCCC-------CCHH--------HHHHHHHHHHHHh--
Confidence             347999999999976421     111112232221 111111221       1221        1233455555554  


Q ss_pred             hhCCCCCcCCCceeeccCcchHHHHHH
Q 013297          231 LEGKQFSLSNADYFVFHSPYNKLVQKS  257 (446)
Q Consensus       231 ~~~~~~~~~did~~i~H~p~~~~~~~~  257 (446)
                          +++++|||++..|....+..+.+
T Consensus       300 ----gi~~~did~ie~hgtgt~~~D~~  322 (418)
T PRK07910        300 ----GLTPGDIDHVNAHATGTSVGDVA  322 (418)
T ss_pred             ----CCCHHHCCEEEcCCcCCCCCCHH
Confidence                78999999999999887665543

>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=98.81  E-value=1.6e-07  Score=96.61  Aligned_cols=218  Identities=11%  Similarity=0.013  Sum_probs=133.5

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhc--CCCc-c----e---eEEe-ecc---eEEecCCC----C-CCHHHHHHHHHHH
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHD--GASK-G----K---YTIG-LGQ---ECMAFCSE----V-EDVISMSLTAVTN   63 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~~-~----k---~~~G-lg~---r~~av~~~----~-Ed~~~lA~~Aa~~   63 (446)
                      ++|-|.+||+..|--. +.+++.+..  |.+. .    .   +..+ +++   +.. ++..    . .....|+..|+++
T Consensus         6 ~rVvITGiG~vsp~G~-~~e~~w~aL~~G~sg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~r~~~r~~~~a~~Aa~~   83 (398)
T PRK06519          6 NDVVITGIGLVSSLGE-GLDAHWNALSAGRPQPNVDTETFAPYPVHPLPEIDWSQQ-IPKRGDQRQMETWQRLGTYAAGL   83 (398)
T ss_pred             CCEEEEcceEECCCCC-CHHHHHHHHHcCCCCCCCCcccccCcCcccccccChhhc-CCchhhhhccCHHHHHHHHHHHH
Confidence            5799999999998764 555554433  3331 1    0   0000 011   000 1110    1 2356689999999


Q ss_pred             HHHHCCCCcC-----CccEEEEEeccCCC-----------------------------CCc---------cHHHHHHHHh
Q 013297           64 LLEKYKIDPK-----QIGRLEVGSETVID-----------------------------KSK---------SIKTFLMQIF  100 (446)
Q Consensus        64 aL~~agi~~~-----dId~li~~T~t~~~-----------------------------~~p---------s~a~~l~~~L  100 (446)
                      +|+++|++..     +++ ++++|..+..                             ..|         ..+..|...+
T Consensus        84 Al~dAGl~~~~~~~~r~G-vivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~  162 (398)
T PRK06519         84 ALDDAGIKGNEELLSTMD-MIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSNLLAGNISIVH  162 (398)
T ss_pred             HHHHcCCCCCCCCccceE-EEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhhHHHHHHHHHh
Confidence            9999998543     343 4455544320                             011         2566788889


Q ss_pred             cccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecC-c------c------CCC------------C
Q 013297          101 EKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-V------Y------AEG------------P  155 (446)
Q Consensus       101 Gl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~-~------y------~~~------------~  155 (446)
                      |+.    -+.+.+..+|++++.||..|..+|++|.+  +.+||.++|.. .      |      ...            .
T Consensus       163 gl~----Gp~~ti~~acaSg~~Ai~~A~~~I~~G~~--d~~lvGG~d~~~~~~~~~~~~~~~~ls~~~~~p~~d~~~~~r  236 (398)
T PRK06519        163 KVT----GSSRTFMGEESAGVSAIEIAFARIASGQS--DHALVGGAYNAERPDMLLLYELGGLLLKGGWAPVWSRGGEDG  236 (398)
T ss_pred             CCC----CccccccCCccHHHHHHHHHHHHHHcCCC--CEEEEeeeccccCHHHHHHHHHcCccCCCCCCchhccCccCC
Confidence            973    35677899999999999999999999987  99999999863 1      1      000            1


Q ss_pred             CCccccccceeeeeccCCCc-----ccccccccccccccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhh
Q 013297          156 ARPTGGAAAVVMLVGPDAPV-----AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEK  230 (446)
Q Consensus       156 ~~~t~GdGAvA~Ll~~~~~~-----~~~~~~~g~~~~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~  230 (446)
                      +....|+||+++||++.+..     .+...+.|..+    |..        +. .+        ..+.++++..++..  
T Consensus       237 ~G~v~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~----d~~--------~~-~~--------~~~~~am~~AL~~A--  293 (398)
T PRK06519        237 GGFILGSGGAFLVLESREHAEARGARPYARISGVES----DRA--------RR-AP--------GDLEASLERLLKPA--  293 (398)
T ss_pred             CCeeeeceEEEEEEeeHHHHHhCCCceEEEEEEEee----cCC--------CC-Ch--------HHHHHHHHHHHHHC--
Confidence            11346999999999986431     11111233311    111        10 11        12345666666665  


Q ss_pred             hhCCCCCcCCCceeeccCcchHHHHHH
Q 013297          231 LEGKQFSLSNADYFVFHSPYNKLVQKS  257 (446)
Q Consensus       231 ~~~~~~~~~did~~i~H~p~~~~~~~~  257 (446)
                          ++ ++||||+..|...++..+..
T Consensus       294 ----gl-~~~IdyI~ahgtgT~~~D~~  315 (398)
T PRK06519        294 ----GG-LAAPTAVISGATGAHPATAE  315 (398)
T ss_pred             ----CC-cccCCEEEeCCCCCCCccHH
Confidence                78 79999999999887765554

>PRK07851 acetyl-CoA acetyltransferase; Provisional

Probab=98.79  E-value=2.9e-08  Score=102.52  Aligned_cols=96  Identities=10%  Similarity=0.110  Sum_probs=82.6

Q ss_pred             CCCHHHHHHHHHHHHHHHC-CCCcCCccEEEEEeccCC-CCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHH
Q 013297           50 VEDVISMSLTAVTNLLEKY-KIDPKQIGRLEVGSETVI-DKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC  127 (446)
Q Consensus        50 ~Ed~~~lA~~Aa~~aL~~a-gi~~~dId~li~~T~t~~-~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A  127 (446)
                      +.+..+|+.+|++++|+++ |+++++||.+++++..+. ...+..+..+...+|+   +.++++.+.++|+++..|+..|
T Consensus        24 ~~~~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl---~~~p~~~v~~~caSG~~av~~A  100 (406)
T PRK07851         24 DMRPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGY---DFLPGTTVNRYCSSSLQTTRMA  100 (406)
T ss_pred             CCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCC---CCCCeeeeeccchhHHHHHHHH
Confidence            5778999999999999997 999999999998864432 2234567789999997   4578899999999999999999


Q ss_pred             HHHHHcCCCCCCEEEEEEeecCc
Q 013297          128 VNWVESSSWDGRYGLVVCTDSAV  150 (446)
Q Consensus       128 ~~~l~sg~~~~~~aLVVasD~~~  150 (446)
                      ...|++|.+  +.|||++.|..+
T Consensus       101 a~~I~sG~~--d~vLv~G~e~~s  121 (406)
T PRK07851        101 FHAIKAGEG--DVFISAGVETVS  121 (406)
T ss_pred             HHHHHCCCC--CEEEEeeEEecc
Confidence            999999987  999999999863

>PRK06157 acetyl-CoA acetyltransferase; Validated

Probab=98.75  E-value=5.5e-08  Score=100.28  Aligned_cols=108  Identities=19%  Similarity=0.174  Sum_probs=86.9

Q ss_pred             EEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCC
Q 013297           36 TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTN  115 (446)
Q Consensus        36 ~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~  115 (446)
                      -.|.+...+.- ..+.+..+|+.+|++++|+++|++++|||.+++++.............+.+.+|+   +..+++.+.+
T Consensus        11 IvG~g~tp~~~-~~~~~~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl---~~~~~~~v~~   86 (398)
T PRK06157         11 ILGMGCTKFGE-RWDAGAEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRL---PNIPVTRVEN   86 (398)
T ss_pred             EEEeccccccc-cCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCC---CCCCEEEEec
Confidence            35666655431 2356789999999999999999999999999998765422222234678889997   3477888999


Q ss_pred             cChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecC
Q 013297          116 ACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA  149 (446)
Q Consensus       116 aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~  149 (446)
                      +|.+++.|+..|...|++|.+  +.+||++.|..
T Consensus        87 ~c~sg~~ai~~A~~~I~sG~~--d~vlv~G~e~~  118 (398)
T PRK06157         87 FCATGSEAFRGAVYAVASGAY--DIALALGVEKL  118 (398)
T ss_pred             ccHHHHHHHHHHHHHHHCCCC--CEEEEEEEeec
Confidence            999999999999999999987  99999999975

>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed

Probab=98.73  E-value=4.6e-08  Score=101.78  Aligned_cols=98  Identities=18%  Similarity=0.231  Sum_probs=84.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHH
Q 013297           49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV  128 (446)
Q Consensus        49 ~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~  128 (446)
                      .+.+..+|+.+|++.+|+++|+++++||.+++++..+....+.++..+...+|+  +..++++.++++|++++.|+..|.
T Consensus        25 ~~~~~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl--~~~~P~~tV~~aCaSG~~Ai~~Aa  102 (428)
T PRK08963         25 HGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGM--NVHTDAYSVSRACATSFQAVANVA  102 (428)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCC--CCCCcceeehhhhHHHHHHHHHHH
Confidence            467789999999999999999999999999999865433234456678888897  446899999999999999999999


Q ss_pred             HHHHcCCCCCCEEEEEEeecCc
Q 013297          129 NWVESSSWDGRYGLVVCTDSAV  150 (446)
Q Consensus       129 ~~l~sg~~~~~~aLVVasD~~~  150 (446)
                      ..|++|.+  +.+||++.|..+
T Consensus       103 ~~I~sG~~--dvvLvgG~Esms  122 (428)
T PRK08963        103 ESIMAGTI--DIGIAGGADSSS  122 (428)
T ss_pred             HHHHCCCC--CEEEEecccccC
Confidence            99999987  999999999774

>PRK06366 acetyl-CoA acetyltransferase; Provisional

Probab=98.72  E-value=9.1e-08  Score=98.36  Aligned_cols=97  Identities=8%  Similarity=0.039  Sum_probs=81.6

Q ss_pred             CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHH
Q 013297           50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN  129 (446)
Q Consensus        50 ~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~  129 (446)
                      +.+..+|+.+|++++|+++|+++++||.+++++..+.......+..+...+|+  +..++.+.+.++|.+++.|+..|..
T Consensus        23 ~~~~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl--~~~~p~~~v~~~caSg~~av~~Aa~  100 (388)
T PRK06366         23 KIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGL--PFGVTKYTVNVVCASGMLAVESAAR  100 (388)
T ss_pred             CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCC--CCCCcceeeechhhHHHHHHHHHHH
Confidence            36789999999999999999999999999998764322123446678888997  4467888888999999999999999


Q ss_pred             HHHcCCCCCCEEEEEEeecCc
Q 013297          130 WVESSSWDGRYGLVVCTDSAV  150 (446)
Q Consensus       130 ~l~sg~~~~~~aLVVasD~~~  150 (446)
                      .|++|.+  +.+||++.|..+
T Consensus       101 ~I~sG~~--d~vla~G~e~ms  119 (388)
T PRK06366        101 EIMLGER--DLVIAGGMENMS  119 (388)
T ss_pred             HHhcCCC--CEEEEEeeEccc
Confidence            9999987  999998889753

>PRK08131 acetyl-CoA acetyltransferase; Provisional

Probab=98.69  E-value=9.3e-08  Score=98.54  Aligned_cols=97  Identities=15%  Similarity=0.170  Sum_probs=84.0

Q ss_pred             CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCC-CCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHH
Q 013297           50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVID-KSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV  128 (446)
Q Consensus        50 ~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~-~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~  128 (446)
                      +.+..+|+.+|++++|+++|+++++||.+++++..+.- ..+.++..+...+|+  +..++++.+.++|++|..|+..|.
T Consensus        23 ~~~~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl--p~~~p~~tV~~~CaSG~~Ai~~A~  100 (401)
T PRK08131         23 SVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGL--PVTVPGQTVNRLCASGLAAVIDAA  100 (401)
T ss_pred             CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCC--CCCCceeeeechhhhHHHHHHHHH
Confidence            67889999999999999999999999999999875332 234566667788887  447899999999999999999999


Q ss_pred             HHHHcCCCCCCEEEEEEeecCc
Q 013297          129 NWVESSSWDGRYGLVVCTDSAV  150 (446)
Q Consensus       129 ~~l~sg~~~~~~aLVVasD~~~  150 (446)
                      ..|++|..  +.+||++.|..+
T Consensus       101 ~~I~sG~~--dvvlagG~Esms  120 (401)
T PRK08131        101 RAITCGEG--DLYLAGGVESMS  120 (401)
T ss_pred             HHHHCCCC--CEEEEEEecCCC
Confidence            99999987  999999999774

>PLN02644 acetyl-CoA C-acetyltransferase

Probab=98.67  E-value=1.3e-07  Score=97.35  Aligned_cols=97  Identities=10%  Similarity=0.042  Sum_probs=81.2

Q ss_pred             CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHH
Q 013297           50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN  129 (446)
Q Consensus        50 ~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~  129 (446)
                      +.+..+|+++|++++|+++|+++++||.+++++.......+..+..+...+|+  +.+.++..+.++|.+++.|+..|..
T Consensus        22 ~~~~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl--~~~~p~~~v~~~caSg~~av~~Aa~   99 (394)
T PLN02644         22 SLSATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGL--PPSTICTTVNKVCASGMKAVMLAAQ   99 (394)
T ss_pred             CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCC--CCCCceEEEeccchHHHHHHHHHHH
Confidence            47789999999999999999999999999988654322223345567788897  4567888899999999999999999


Q ss_pred             HHHcCCCCCCEEEEEEeecCc
Q 013297          130 WVESSSWDGRYGLVVCTDSAV  150 (446)
Q Consensus       130 ~l~sg~~~~~~aLVVasD~~~  150 (446)
                      .|++|.+  +.+||++.|..+
T Consensus       100 ~I~sG~~--d~vlv~G~E~~s  118 (394)
T PLN02644        100 SIQLGIN--DVVVAGGMESMS  118 (394)
T ss_pred             HHHcCCC--CEEEEEeEEecC
Confidence            9999987  999999988764

>PRK07850 acetyl-CoA acetyltransferase; Provisional

Probab=98.67  E-value=1.2e-07  Score=97.36  Aligned_cols=97  Identities=11%  Similarity=0.092  Sum_probs=81.8

Q ss_pred             CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCC-CccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHH
Q 013297           50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV  128 (446)
Q Consensus        50 ~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~-~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~  128 (446)
                      +.++.+|+.+|++.+|+++|+++++||.+++++...... ....+..+...+|+  ..+++++.+.++|++|..|+..|.
T Consensus        23 ~~~~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl--~~~~p~~tV~~~CaSG~~A~~~A~  100 (387)
T PRK07850         23 GLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGL--PYHVGATTIDCQCGSAQQANHLVA  100 (387)
T ss_pred             CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCC--CCCCceEEEecccccHHHHHHHHH
Confidence            456899999999999999999999999999987543221 12345566666887  447999999999999999999999


Q ss_pred             HHHHcCCCCCCEEEEEEeecCc
Q 013297          129 NWVESSSWDGRYGLVVCTDSAV  150 (446)
Q Consensus       129 ~~l~sg~~~~~~aLVVasD~~~  150 (446)
                      ..|++|..  +.+||++.|..+
T Consensus       101 ~~I~sG~~--dvvla~G~E~mS  120 (387)
T PRK07850        101 GLIAAGAI--DVGIACGVEAMS  120 (387)
T ss_pred             HHHHCCCC--CEEEEEeEecCC
Confidence            99999977  999999999884

>PRK06365 acetyl-CoA acetyltransferase; Provisional

Probab=98.67  E-value=1.3e-07  Score=98.32  Aligned_cols=108  Identities=8%  Similarity=-0.058  Sum_probs=84.8

Q ss_pred             EEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHH-HHHHHHhcccCCCCceeeeeC
Q 013297           36 TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIK-TFLMQIFEKFGNTDIEGVDST  114 (446)
Q Consensus        36 ~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a-~~l~~~LGl~g~~~~~~~di~  114 (446)
                      -.|.+...+.-...+.+..+|+.+|++++|+++|++++|||.+++++.+........+ ..+...||+   +..+++.+.
T Consensus        20 IvG~g~Tpfgr~~~~~~~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl---~~~~~~~v~   96 (430)
T PRK06365         20 MVAAGVTKFDKASPYMDFRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGL---VPKPSKRIE   96 (430)
T ss_pred             EEEeeecCccccCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCC---CCCceEEEe
Confidence            4577766544222456788999999999999999999999998876544322222222 346789997   447888999


Q ss_pred             CcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeec
Q 013297          115 NACYGGTAALFNCVNWVESSSWDGRYGLVVCTDS  148 (446)
Q Consensus       115 ~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~  148 (446)
                      ++|+++..|+..|...|++|.+  +.|||+++|.
T Consensus        97 ~~~aSg~~ai~~A~~~I~sG~~--~~vLv~G~e~  128 (430)
T PRK06365         97 GGGATGGLAFQAGYEEIASGRM--DCVAVYGFET  128 (430)
T ss_pred             CCcHHHHHHHHHHHHHHHcCCC--CEEEEEEeee
Confidence            9999999999999999999987  9999999985

>TIGR02446 FadI fatty oxidation complex, beta subunit FadI

Probab=98.66  E-value=1e-07  Score=99.08  Aligned_cols=97  Identities=20%  Similarity=0.243  Sum_probs=81.2

Q ss_pred             CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHH
Q 013297           50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN  129 (446)
Q Consensus        50 ~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~  129 (446)
                      +.+..+|+.+|++.+|+++++++++||.+++++..+....+.++..+.-..|+  ...++++.+.++|++|..|+..|..
T Consensus        28 ~~~~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl--~~~~p~~~V~~~CaSG~~A~~~a~~  105 (430)
T TIGR02446        28 GIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGM--NVHTDAYSVTRACATSFQSAVNVAE  105 (430)
T ss_pred             CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCC--CCCCchhhhhhhhhHHHHHHHHHHH
Confidence            56889999999999999999999999999999766432222344444444687  4478999999999999999999999


Q ss_pred             HHHcCCCCCCEEEEEEeecCc
Q 013297          130 WVESSSWDGRYGLVVCTDSAV  150 (446)
Q Consensus       130 ~l~sg~~~~~~aLVVasD~~~  150 (446)
                      .|++|.+  +.+||++.|..+
T Consensus       106 ~I~sG~~--dvvla~G~E~mS  124 (430)
T TIGR02446       106 SIMAGAI--DIGIAGGADSSS  124 (430)
T ss_pred             HHHCCCC--CEEEEeeeEccc
Confidence            9999987  999999999885

This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.

>PRK06633 acetyl-CoA acetyltransferase; Provisional

Probab=98.65  E-value=9e-08  Score=98.29  Aligned_cols=98  Identities=10%  Similarity=0.130  Sum_probs=84.6

Q ss_pred             CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHH
Q 013297           50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN  129 (446)
Q Consensus        50 ~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~  129 (446)
                      +..+.+|+.+|++.+|+++|+++++||.+++++..+.......+..+...+|+  +..++++.+.++|.+|..|+..|..
T Consensus        24 ~~~~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl--~~~~p~~~V~~~CaSG~~Ai~~A~~  101 (392)
T PRK06633         24 TTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGI--PKEVPGYTINKVCGSGLKSVALAAN  101 (392)
T ss_pred             CCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCC--CCCccchhhcchhHHHHHHHHHHHH
Confidence            67789999999999999999999999999998765433334556667788887  4469999999999999999999999


Q ss_pred             HHHcCCCCCCEEEEEEeecCcc
Q 013297          130 WVESSSWDGRYGLVVCTDSAVY  151 (446)
Q Consensus       130 ~l~sg~~~~~~aLVVasD~~~y  151 (446)
                      .|++|..  +.+||++.|..+.
T Consensus       102 ~I~sG~~--dvvla~G~E~ms~  121 (392)
T PRK06633        102 SIMTGDN--EIVIAGGQENMSL  121 (392)
T ss_pred             HHHcCCC--CEEEEcccccCCC
Confidence            9999977  9999999998753

>PRK09050 beta-ketoadipyl CoA thiolase; Validated

Probab=98.65  E-value=1.3e-07  Score=97.46  Aligned_cols=97  Identities=8%  Similarity=0.114  Sum_probs=84.8

Q ss_pred             CCCHHHHHHHHHHHHHHH-CCCCcCCccEEEEEeccCCCC-CccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHH
Q 013297           50 VEDVISMSLTAVTNLLEK-YKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC  127 (446)
Q Consensus        50 ~Ed~~~lA~~Aa~~aL~~-agi~~~dId~li~~T~t~~~~-~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A  127 (446)
                      +.++.+|+.+|++.+|++ +|+++++||.|++++..+... .+..+..+...+|+  +.+++++.|.++|++|..|+..|
T Consensus        23 ~~~~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl--~~~vP~~tV~~aCaSG~~Ai~~A  100 (401)
T PRK09050         23 SVRADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGL--PVSVPGTTINRLCGSGMDAVGTA  100 (401)
T ss_pred             CCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCC--CCCCceEEEecccccHHHHHHHH
Confidence            677899999999999996 799999999999997654222 34567778899998  56799999999999999999999


Q ss_pred             HHHHHcCCCCCCEEEEEEeecCc
Q 013297          128 VNWVESSSWDGRYGLVVCTDSAV  150 (446)
Q Consensus       128 ~~~l~sg~~~~~~aLVVasD~~~  150 (446)
                      ...|++|..  +.+||++.|..+
T Consensus       101 ~~~I~sG~~--dvvlagGvEsmS  121 (401)
T PRK09050        101 ARAIKAGEA--ELMIAGGVESMS  121 (401)
T ss_pred             HHHHHCCCC--CEEEEecccccc
Confidence            999999977  999999999885

>PRK13359 beta-ketoadipyl CoA thiolase; Provisional

Probab=98.64  E-value=1.5e-07  Score=96.87  Aligned_cols=98  Identities=11%  Similarity=0.116  Sum_probs=85.5

Q ss_pred             CCCHHHHHHHHHHHHHHH-CCCCcCCccEEEEEeccCCCC-CccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHH
Q 013297           50 VEDVISMSLTAVTNLLEK-YKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC  127 (446)
Q Consensus        50 ~Ed~~~lA~~Aa~~aL~~-agi~~~dId~li~~T~t~~~~-~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A  127 (446)
                      +.++.+|+..|++.+|++ +|+++++||.+|+++..+... .+..+..+...+|+  +.+++++.|.++|++++.|+.+|
T Consensus        23 ~~~~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl--~~~vp~~tV~~~CaSG~~Av~~A  100 (400)
T PRK13359         23 SVRADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGL--PHGVPGSTINRLCGSGMDAVGVA  100 (400)
T ss_pred             CCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCC--CCCCceEEEeccchhHHHHHHHH
Confidence            457899999999999997 599999999999997764322 36678888899998  55799999999999999999999


Q ss_pred             HHHHHcCCCCCCEEEEEEeecCcc
Q 013297          128 VNWVESSSWDGRYGLVVCTDSAVY  151 (446)
Q Consensus       128 ~~~l~sg~~~~~~aLVVasD~~~y  151 (446)
                      ...|++|..  +.+|+++.|..+.
T Consensus       101 ~~~I~sG~~--divlagGvEsmS~  122 (400)
T PRK13359        101 ARAIKSGEA--ALMIAGGVESMSR  122 (400)
T ss_pred             HHHHHcCCC--CEEEEeeeeccCC
Confidence            999999977  9999999998853

>PTZ00455 3-ketoacyl-CoA thiolase; Provisional

Probab=98.63  E-value=2.2e-07  Score=96.73  Aligned_cols=100  Identities=16%  Similarity=0.118  Sum_probs=81.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHCCCCcCC--ccEEEEEeccCCC--CCccHHHHHHHHhccc----CCCCceeeeeCCcChhH
Q 013297           49 EVEDVISMSLTAVTNLLEKYKIDPKQ--IGRLEVGSETVID--KSKSIKTFLMQIFEKF----GNTDIEGVDSTNACYGG  120 (446)
Q Consensus        49 ~~Ed~~~lA~~Aa~~aL~~agi~~~d--Id~li~~T~t~~~--~~ps~a~~l~~~LGl~----g~~~~~~~di~~aC~gg  120 (446)
                      .+.+..+|+.+|++++|+++|++++|  ||.+++++.....  ..+..+..+...+|+.    |...++++.+.++|.++
T Consensus        44 ~~~s~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p~~~V~~~caSG  123 (438)
T PTZ00455         44 ENKTLEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRVEGACASG  123 (438)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCceeEEECcCHHH
Confidence            35678999999999999999999999  9999998764322  2344566666666551    12567889999999999


Q ss_pred             HHHHHHHHHHHHcCCCCCCEEEEEEeecCc
Q 013297          121 TAALFNCVNWVESSSWDGRYGLVVCTDSAV  150 (446)
Q Consensus       121 ~~AL~~A~~~l~sg~~~~~~aLVVasD~~~  150 (446)
                      ..|+..|...|++|.+  +.|||++.|..+
T Consensus       124 ~~Ai~~A~~~I~sG~~--dvvlv~G~E~ms  151 (438)
T PTZ00455        124 GLAVQSAWEALLAGTS--DIALVVGVEVQT  151 (438)
T ss_pred             HHHHHHHHHHHHCCCC--CEEEEEEEeecc
Confidence            9999999999999987  999999999763

>TIGR02430 pcaF beta-ketoadipyl CoA thiolase

Probab=98.58  E-value=2.6e-07  Score=95.16  Aligned_cols=97  Identities=10%  Similarity=0.120  Sum_probs=84.3

Q ss_pred             CCCHHHHHHHHHHHHHHH-CCCCcCCccEEEEEeccCCC-CCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHH
Q 013297           50 VEDVISMSLTAVTNLLEK-YKIDPKQIGRLEVGSETVID-KSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC  127 (446)
Q Consensus        50 ~Ed~~~lA~~Aa~~aL~~-agi~~~dId~li~~T~t~~~-~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A  127 (446)
                      +.++.+|+.+|++.+|++ +++++++||.+++++..... ..+..+..+...+|+  ..+++++.|.++|++|..|+..|
T Consensus        22 ~~~~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl--~~~~p~~~V~~~CaSG~~Ai~~a   99 (400)
T TIGR02430        22 SVRADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGL--PVSVPGTTVNRLCGSGLDAIGMA   99 (400)
T ss_pred             CCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCC--CCCCceEEeechhhhHHHHHHHH
Confidence            667899999999999995 69999999999999765322 135577779999998  44799999999999999999999


Q ss_pred             HHHHHcCCCCCCEEEEEEeecCc
Q 013297          128 VNWVESSSWDGRYGLVVCTDSAV  150 (446)
Q Consensus       128 ~~~l~sg~~~~~~aLVVasD~~~  150 (446)
                      ...|++|..  +.+||++.|..+
T Consensus       100 ~~~I~sG~~--d~~la~G~E~ms  120 (400)
T TIGR02430       100 ARAIKAGEA--DLLIAGGVESMS  120 (400)
T ss_pred             HHHHHCCCC--CEEEEecccccc
Confidence            999999977  999999999885

Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.

>PRK06504 acetyl-CoA acetyltransferase; Provisional

Probab=98.57  E-value=3.5e-07  Score=94.00  Aligned_cols=97  Identities=12%  Similarity=0.151  Sum_probs=79.4

Q ss_pred             CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCC-CccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHH
Q 013297           50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV  128 (446)
Q Consensus        50 ~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~-~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~  128 (446)
                      +.++.+|+.+|++.+|+++++++++||.+++++..+... .+..+..+.-.-||  ..+++++.+.++|++|..|+..|.
T Consensus        23 ~~~~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl--~~~vP~~tV~~~CaSG~~Ai~~A~  100 (390)
T PRK06504         23 GWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKL--PESVPGTSIDRQCGSSQQALHFAA  100 (390)
T ss_pred             CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCC--CCCCceEEEechhhHHHHHHHHHH
Confidence            667899999999999999999999999999987653221 23343332223365  457899999999999999999999


Q ss_pred             HHHHcCCCCCCEEEEEEeecCc
Q 013297          129 NWVESSSWDGRYGLVVCTDSAV  150 (446)
Q Consensus       129 ~~l~sg~~~~~~aLVVasD~~~  150 (446)
                      ..|++|.+  +.+||++.|..+
T Consensus       101 ~~I~sG~~--dvvLagGvEsmS  120 (390)
T PRK06504        101 QAVMSGTM--DIVIAAGVESMT  120 (390)
T ss_pred             HHHHCCCC--CEEEEeeeeecC
Confidence            99999977  999999999874

>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed

Probab=98.52  E-value=4.1e-07  Score=93.44  Aligned_cols=97  Identities=13%  Similarity=0.092  Sum_probs=82.3

Q ss_pred             CCCHHHHHHHHHHHHHHH-CCCCcCCccEEEEEeccCCCC-CccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHH
Q 013297           50 VEDVISMSLTAVTNLLEK-YKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC  127 (446)
Q Consensus        50 ~Ed~~~lA~~Aa~~aL~~-agi~~~dId~li~~T~t~~~~-~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A  127 (446)
                      +.+..+|+..+++.+|++ +|+++++||.+++++..+... .+..+..+...+|+  +..++++.+.++|++|..|+..|
T Consensus        24 ~~~~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl--~~~~p~~~V~~~caSG~~Ai~~A  101 (387)
T PRK08947         24 NVRAEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGI--PHSVPAVTVNRLCGSSMQALHDA  101 (387)
T ss_pred             CCCHHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCC--CCCCcceeeechhHHHHHHHHHH
Confidence            667899999999999996 699999999999997653322 24456667788887  44688999999999999999999


Q ss_pred             HHHHHcCCCCCCEEEEEEeecCc
Q 013297          128 VNWVESSSWDGRYGLVVCTDSAV  150 (446)
Q Consensus       128 ~~~l~sg~~~~~~aLVVasD~~~  150 (446)
                      ...|++|.+  +.+||++.|..+
T Consensus       102 ~~~I~sG~~--d~vlv~G~E~ms  122 (387)
T PRK08947        102 ARAIMTGDG--DVFLIGGVEHMG  122 (387)
T ss_pred             HHHHHCCCC--CEEEEccccccc
Confidence            999999987  999999999763

>PRK08142 acetyl-CoA acetyltransferase; Provisional

Probab=98.50  E-value=6.1e-07  Score=92.15  Aligned_cols=103  Identities=5%  Similarity=-0.059  Sum_probs=82.7

Q ss_pred             EEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCC
Q 013297           36 TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTN  115 (446)
Q Consensus        36 ~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~  115 (446)
                      -.|+|+..+.. .++.+..+|+.+|++++|+++|++++|||.+++.+..+..    ....+.+.||+   ...+...+.+
T Consensus         9 IvG~g~t~~~~-~~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~----~~~~~~~~lGl---~~~~~~~v~~   80 (388)
T PRK08142          9 IVGAYEHPTRK-APDKSVAQLHAEVAKGALADAGLSLADVDGYFCAGDAPGL----GPASMVDYLGL---KLRHVDSTET   80 (388)
T ss_pred             EEEEeecccee-CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCCCc----cHHHHHHhCCC---CCeeeccccC
Confidence            46888877654 3567889999999999999999999999998753222111    12458899997   3456777789


Q ss_pred             cChhHHHHHHHHHHHHHcCCCCCCEEEEEEeec
Q 013297          116 ACYGGTAALFNCVNWVESSSWDGRYGLVVCTDS  148 (446)
Q Consensus       116 aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~  148 (446)
                      +|.++..++..|...|++|.+  +.||||+.|.
T Consensus        81 gg~s~~~a~~~A~~~I~sG~~--d~vLvvg~e~  111 (388)
T PRK08142         81 GGSSYLAHVGHAAQAIAAGKC--SVALITLAGR  111 (388)
T ss_pred             CcHHHHHHHHHHHHHHHcCCC--CEEEEEeeee
Confidence            999999999999999999988  9999999875

>PRK09268 acetyl-CoA acetyltransferase; Provisional

Probab=98.48  E-value=7.9e-07  Score=92.43  Aligned_cols=97  Identities=13%  Similarity=0.142  Sum_probs=79.2

Q ss_pred             CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHH
Q 013297           50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN  129 (446)
Q Consensus        50 ~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~  129 (446)
                      +.+..+|+.+|++.+|+++|+++++||.+++++..+....+..+..+.-..|+  ....+++.++++|++|+.|+..|..
T Consensus        28 ~~~~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl--~~~~p~~~V~~~CaSG~~ai~~A~~  105 (427)
T PRK09268         28 DASNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSAL--SPYTPAYDLQQACGTGLEAAILVAN  105 (427)
T ss_pred             CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCC--CCCCceeeeechhhHHHHHHHHHHH
Confidence            56889999999999999999999999999999765422122344444444444  3567899999999999999999999


Q ss_pred             HHHcCCCCCCEEEEEEeecCc
Q 013297          130 WVESSSWDGRYGLVVCTDSAV  150 (446)
Q Consensus       130 ~l~sg~~~~~~aLVVasD~~~  150 (446)
                      .|++|..  +.+||++.|..+
T Consensus       106 ~I~sG~~--d~vlvgG~E~ms  124 (427)
T PRK09268        106 KIALGQI--DSGIAGGVDTTS  124 (427)
T ss_pred             HHHCCCC--CEEEEeeEEccC
Confidence            9999977  999999999764

>PRK07801 acetyl-CoA acetyltransferase; Provisional

Probab=98.46  E-value=7.6e-07  Score=91.41  Aligned_cols=95  Identities=13%  Similarity=0.132  Sum_probs=74.7

Q ss_pred             CCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccC-CCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHH
Q 013297           51 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETV-IDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN  129 (446)
Q Consensus        51 Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~-~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~  129 (446)
                      .+..+|+.+|++++|+++|+++++||.+++++... ....+..+..+.-..|+  ...++++.+.++|++++.|+..|..
T Consensus        24 ~~~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl--~~~~p~~~v~~acaSg~~Av~~Aa~  101 (382)
T PRK07801         24 VHPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGL--PEEVPGVTVDRQCGSSQQAIHFAAQ  101 (382)
T ss_pred             CCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCC--CCCCceeeecchhhhHHHHHHHHHH
Confidence            67899999999999999999999999999985421 11112233333334565  3457788899999999999999999


Q ss_pred             HHHcCCCCCCEEEEEEeecC
Q 013297          130 WVESSSWDGRYGLVVCTDSA  149 (446)
Q Consensus       130 ~l~sg~~~~~~aLVVasD~~  149 (446)
                      .|++|.+  +.+||++.|..
T Consensus       102 ~I~sG~~--d~vLv~G~e~m  119 (382)
T PRK07801        102 AVMSGTQ--DLVVAGGVQNM  119 (382)
T ss_pred             HHHCCCC--CEEEEcchhhh
Confidence            9999988  99999988854

>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2

Probab=98.44  E-value=1.2e-06  Score=84.35  Aligned_cols=114  Identities=23%  Similarity=0.205  Sum_probs=80.9

Q ss_pred             HHHHHHHHHHHHHHHCCCCcCCc-----cEEEEEeccCCC---------------CCc---------cHHHHHHHHhccc
Q 013297           53 VISMSLTAVTNLLEKYKIDPKQI-----GRLEVGSETVID---------------KSK---------SIKTFLMQIFEKF  103 (446)
Q Consensus        53 ~~~lA~~Aa~~aL~~agi~~~dI-----d~li~~T~t~~~---------------~~p---------s~a~~l~~~LGl~  103 (446)
                      ..-|++.|+.++|+++|++++++     =.|+++|..+.+               ..|         ..+..|...+|+.
T Consensus        87 ~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~  166 (254)
T PF00109_consen   87 QSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFGLR  166 (254)
T ss_dssp             HHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHTB-
T ss_pred             hhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcCCC
Confidence            46799999999999999988533     235567666521               011         2577899999983


Q ss_pred             CCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecC-c------c------CC-CC--------CCcccc
Q 013297          104 GNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-V------Y------AE-GP--------ARPTGG  161 (446)
Q Consensus       104 g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~-~------y------~~-~~--------~~~t~G  161 (446)
                          -+.+.+..+|++++.||..|..+|++|.+  +.+||.++|.. .      +      .. ++        +....|
T Consensus       167 ----G~~~tv~~acaSgl~Al~~A~~~I~~G~~--d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~pf~~~~~G~v~g  240 (254)
T PF00109_consen  167 ----GPSYTVSTACASGLAALEAAYRAIRSGEA--DVALVGGVDAPLSPFILAGFSALGALSADGPCRPFDPFADGFVLG  240 (254)
T ss_dssp             ----SSEEEEE-GGGHHHHHHHHHHHHHHTTSS--SEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGSTBTTB-SB-BB
T ss_pred             ----Cccccccccccccccccchhccccccccc--cccccccccccccccccccccccccccccccccccCCCCCCEEEE
Confidence                34677889999999999999999999987  99999999943 1      1      11 11        124589


Q ss_pred             ccceeeeeccC
Q 013297          162 AAAVVMLVGPD  172 (446)
Q Consensus       162 dGAvA~Ll~~~  172 (446)
                      +||+++||.+.
T Consensus       241 EGa~~~vLe~~  251 (254)
T PF00109_consen  241 EGAGALVLERL  251 (254)
T ss_dssp             -EEEEEEEEEH
T ss_pred             CceEEEEEEEh
Confidence            99999999763

3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....

>TIGR02445 fadA fatty oxidation complex, beta subunit FadA

Probab=98.43  E-value=7.1e-07  Score=91.62  Aligned_cols=97  Identities=14%  Similarity=0.116  Sum_probs=79.7

Q ss_pred             CCCHHHHHHHHHHHHHHH-CCCCcCCccEEEEEeccCCCC-CccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHH
Q 013297           50 VEDVISMSLTAVTNLLEK-YKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC  127 (446)
Q Consensus        50 ~Ed~~~lA~~Aa~~aL~~-agi~~~dId~li~~T~t~~~~-~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A  127 (446)
                      +.++.+|+.+|++.+|++ +|+++++||.+++++...... ...++..+....|+  ...++++.++++|++|..|+..|
T Consensus        22 ~~~~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~--~~~~p~~tV~~~CaSG~~Ai~~A   99 (385)
T TIGR02445        22 NTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQI--PHTSAAVTVNRLCGSSMQALHDA   99 (385)
T ss_pred             CCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCC--CCCcchhhhhhhhHHHHHHHHHH
Confidence            667889999999999997 599999999999997643221 22345555556676  45588999999999999999999


Q ss_pred             HHHHHcCCCCCCEEEEEEeecCc
Q 013297          128 VNWVESSSWDGRYGLVVCTDSAV  150 (446)
Q Consensus       128 ~~~l~sg~~~~~~aLVVasD~~~  150 (446)
                      ...|++|..  +.+||++.|..+
T Consensus       100 a~~I~sG~~--d~vlagG~E~ms  120 (385)
T TIGR02445       100 ARAIMTGDA--DVCLVGGVEHMG  120 (385)
T ss_pred             HHHHHCCCC--CEEEEeeehhcc
Confidence            999999977  999999999764

This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=98.41  E-value=1.1e-05  Score=98.95  Aligned_cols=140  Identities=12%  Similarity=0.018  Sum_probs=90.1

Q ss_pred             HHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCc-------cC-------CCC--
Q 013297           92 IKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-------YA-------EGP--  155 (446)
Q Consensus        92 ~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-------y~-------~~~--  155 (446)
                      ++.+|...||+.    -+.+.+..||++++.||.+|..+|++|.+  +.+||.+.|...       +.       ++.  
T Consensus       185 ~A~RIS~~f~L~----Gps~tVdtACsSSL~Al~~A~~~L~~G~~--D~alvGGv~~~~~p~~~~~fs~~~~lS~~g~cr  258 (2582)
T TIGR02813       185 ISGRIANRFDLG----GMNCVVDAACAGSLAAIRMALSELLEGRS--EMMITGGVCTDNSPFMYMSFSKTPAFTTNEDIQ  258 (2582)
T ss_pred             HHHHHHHHhCCC----CCcccccchhHHHHHHHHHHHHHHHcCCC--CEEEEecceeeCCHHHHHHHHhccCcCCCCCcc
Confidence            477888999983    34678899999999999999999999988  999999887631       11       111  


Q ss_pred             ------CCccccccceeeeeccCCCc-----ccccccccccccccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHH
Q 013297          156 ------ARPTGGAAAVVMLVGPDAPV-----AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCL  224 (446)
Q Consensus       156 ------~~~t~GdGAvA~Ll~~~~~~-----~~~~~~~g~~~~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~  224 (446)
                            +....|+|++++||.+-...     .+..-+.|+...+  |-...  +..-|..+|+          .+++++.
T Consensus       259 pFD~~adG~v~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~~--DG~~~--~itaP~~~gq----------~~~i~~A  324 (2582)
T TIGR02813       259 PFDIDSKGMMIGEGIGMMALKRLEDAERDGDRIYAVIKGVGASS--DGKFK--SIYAPRPEGQ----------AKALKRA  324 (2582)
T ss_pred             CCCCCCCcccccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEcC--CCCCC--CCcCCCHHHH----------HHHHHHH
Confidence                  22457999999999975421     1111123332211  10100  0001222222          2344555


Q ss_pred             HHHhhhhhCCCCCcCCCceeeccCcchHHHHHH
Q 013297          225 CSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKS  257 (446)
Q Consensus       225 ~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~  257 (446)
                      ++..      ++.+++|+|+-.|..+++..+.+
T Consensus       325 l~~A------gi~p~~I~yIeaHGTGT~~gD~~  351 (2582)
T TIGR02813       325 YDDA------GFAPHTCGLIEAHGTGTAAGDVA  351 (2582)
T ss_pred             HHHc------CCCHHHCCEEEecCCCCCCCCHH
Confidence            5554      89999999999999888776654

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK07855 lipid-transfer protein; Provisional

Probab=98.40  E-value=1.5e-06  Score=89.28  Aligned_cols=101  Identities=9%  Similarity=0.001  Sum_probs=80.4

Q ss_pred             EEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCC
Q 013297           36 TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTN  115 (446)
Q Consensus        36 ~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~  115 (446)
                      -.|+|+..+.. .++.+..+|+.+|++++|+++|++++|||.+++.+..   ..+.  ..+.+.||+  .+......+.+
T Consensus         8 IvG~g~t~~~r-~~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~---~~~~--~~l~~~lGl--~~~~~~~~v~~   79 (386)
T PRK07855          8 IVGIGATEFSK-NSGRSELRLACEAVLAALDDAGLAPSDVDGLVTFTMD---TNPE--IAVARALGI--GELKFFSRIHY   79 (386)
T ss_pred             EEEeeeccccc-CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCc---cccH--HHHHHHCCC--CCCcceeeecC
Confidence            46888766542 3466889999999999999999999999999874431   1222  568899997  33234557789


Q ss_pred             cChhHHHHHHHHHHHHHcCCCCCCEEEEEEe
Q 013297          116 ACYGGTAALFNCVNWVESSSWDGRYGLVVCT  146 (446)
Q Consensus       116 aC~gg~~AL~~A~~~l~sg~~~~~~aLVVas  146 (446)
                      +|.++..+|..|...|++|.+  +.|||+++
T Consensus        80 gg~sg~~~~~~A~~~I~sG~~--d~vLv~g~  108 (386)
T PRK07855         80 GGGAACATVQQAAMAVATGVA--DVVVCYRA  108 (386)
T ss_pred             CcHHHHHHHHHHHHHHHCCCC--CEEEEEee
Confidence            999999999999999999988  99999977

>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long

Probab=98.38  E-value=6.2e-05  Score=73.04  Aligned_cols=111  Identities=17%  Similarity=0.100  Sum_probs=74.5

Q ss_pred             HHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHH
Q 013297           53 VISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVE  132 (446)
Q Consensus        53 ~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~  132 (446)
                      -..|..+|++.+|++++++++|||.++-+--...-   -.+++..+.|++      +.+.+-.||+...-+|.+|..+|.
T Consensus        51 E~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~---i~s~f~ar~l~i------Pf~GlygACST~~e~l~laa~~vd  121 (329)
T PF07451_consen   51 ESKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQI---ISSSFAARDLGI------PFLGLYGACSTMMESLALAAMLVD  121 (329)
T ss_dssp             HHHHHHHHHHHHHHHTT--GGG-SEEEEEETTCCC---CHHHHHHHHHT--------EEEB--CCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhh---HHHHHHHHhcCC------CccchhhHHHHHHHHHHHHHHHHh
Confidence            35688999999999999999999999866443322   357899999984      578888999999999999999999


Q ss_pred             cCCCCCCEEEEEEeecC-------ccCC--CCCC-c---cccccceeeeeccCCC
Q 013297          133 SSSWDGRYGLVVCTDSA-------VYAE--GPAR-P---TGGAAAVVMLVGPDAP  174 (446)
Q Consensus       133 sg~~~~~~aLVVasD~~-------~y~~--~~~~-~---t~GdGAvA~Ll~~~~~  174 (446)
                      +|..  +++|+.+|--.       +|..  +.-+ +   .-=-||.|+||++.+.
T Consensus       122 gg~a--~~vla~tSSH~~tAERQfR~P~EyG~Qrp~tAqwTVTGaGa~il~~~~~  174 (329)
T PF07451_consen  122 GGFA--DYVLAATSSHFATAERQFRFPTEYGGQRPPTAQWTVTGAGAAILSKEGS  174 (329)
T ss_dssp             TTS---SEEEEEEEE-CCHHHHHT---GGGT----TT--EE--EEEEEEEESS--
T ss_pred             CCCc--ceEEEEeccccchhhhhccCchhccCCCCCcccEEEeceEEEEEecCCC
Confidence            9987  99999887654       2321  1111 1   1234666889998754

This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.

>PRK08257 acetyl-CoA acetyltransferase; Validated

Probab=98.36  E-value=3.1e-06  Score=89.65  Aligned_cols=108  Identities=11%  Similarity=0.058  Sum_probs=84.3

Q ss_pred             EEeecceEEecCCCCC--CHHHHHHHHHHHHHHHCCCC--cCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceee
Q 013297           36 TIGLGQECMAFCSEVE--DVISMSLTAVTNLLEKYKID--PKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGV  111 (446)
Q Consensus        36 ~~Glg~r~~av~~~~E--d~~~lA~~Aa~~aL~~agi~--~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~  111 (446)
                      .+|+|+..+....++.  +..+|+.+|++++|+++|++  +++||.+++++..... .......+.+.||+  .+ ....
T Consensus         8 IVGvG~t~~~~~~~~~~~s~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~-~~~~~~~la~~lGl--~p-~~~~   83 (498)
T PRK08257          8 IVGVGQVTERPDDPAYGLEPVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWR-YRDPPGLLAERLGA--DP-ARTV   83 (498)
T ss_pred             EEEeeecccccCCcccCCCHHHHHHHHHHHHHHhcCCCcCHHHCCEEEEecccccc-ccCHHHHHHHHcCC--CC-ccee
Confidence            4689887654212232  78999999999999999999  9999999987543221 22345789999997  33 3445


Q ss_pred             eeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecC
Q 013297          112 DSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA  149 (446)
Q Consensus       112 di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~  149 (446)
                      ....||.++..+|..|...|++|.+  +.|||+++|..
T Consensus        84 ~~~~GG~s~~~~v~~Aa~~IasG~a--dvVLv~G~E~~  119 (498)
T PRK08257         84 YSPVGGNSPQRLVNEAALRIAAGEA--DVALVAGAEAQ  119 (498)
T ss_pred             EecCCCHHHHHHHHHHHHHHHCCCC--CEEEEeeeeec
Confidence            5668888999999999999999988  99999999975

>PRK06066 acetyl-CoA acetyltransferase; Provisional

Probab=98.28  E-value=5.3e-06  Score=85.03  Aligned_cols=105  Identities=12%  Similarity=0.089  Sum_probs=77.1

Q ss_pred             EEeecceEEecCCCCCCHHHHHHHHHHHHHHHCC-CCc-CCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeee
Q 013297           36 TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYK-IDP-KQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDS  113 (446)
Q Consensus        36 ~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~ag-i~~-~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di  113 (446)
                      -.|+|+..+....++.+..+|+.+|++++|+++| +++ +|||.+++++........-....+.+.||+  . ..+.+-+
T Consensus         8 IvG~g~t~~~~~~~~~s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~--~-~~~~~~v   84 (385)
T PRK06066          8 IVGIGWYGFRPTTPEVSFREMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGG--A-MRPTMTV   84 (385)
T ss_pred             EEEeeecCCcCCCCCCCHHHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHccc--C-CCCeEEE
Confidence            4688877754223578899999999999999999 997 899999875421111111122346688886  2 2223333


Q ss_pred             CCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeec
Q 013297          114 TNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDS  148 (446)
Q Consensus       114 ~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~  148 (446)
                         |.++..++..|...|++|.+  +.|||++.+.
T Consensus        85 ---~~sg~~a~~~A~~aV~sG~~--d~vLv~g~~~  114 (385)
T PRK06066         85 ---AGDGLQGLAHAVMHINSGLA--NVVVVEAHSK  114 (385)
T ss_pred             ---eCcHHHHHHHHHHHHHcCCC--CEEEEEEEee
Confidence               88999999999999999988  9999999874

>PRK06025 acetyl-CoA acetyltransferase; Provisional

Probab=98.28  E-value=5.8e-06  Score=85.20  Aligned_cols=98  Identities=11%  Similarity=0.075  Sum_probs=87.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCC-CccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHH
Q 013297           49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC  127 (446)
Q Consensus        49 ~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~-~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A  127 (446)
                      .+-++.+|+..+.+.+|+++++++++||-||++...+.-. .+.++....-..||  +..++++.|+..|.|++.|+.+|
T Consensus        25 ~~~~~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~agl--p~~vp~~tvnr~C~Sgl~ai~~a  102 (417)
T PRK06025         25 AHLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGY--DIKASGVTLDRFCGGGITSVNLA  102 (417)
T ss_pred             CCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCC--CCCCCeeeeccccchHHHHHHHH
Confidence            3678999999999999999999999999999998765432 35678888888888  67899999999999999999999


Q ss_pred             HHHHHcCCCCCCEEEEEEeecCc
Q 013297          128 VNWVESSSWDGRYGLVVCTDSAV  150 (446)
Q Consensus       128 ~~~l~sg~~~~~~aLVVasD~~~  150 (446)
                      ...|++|..  +.+|+.+.|..+
T Consensus       103 a~~I~~G~~--~~~laGG~EsmS  123 (417)
T PRK06025        103 AAQIMSGME--DLVIAGGTEMMS  123 (417)
T ss_pred             HHHHHcCCC--CEEEEeeeeccC
Confidence            999999976  999999999885

>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]

Probab=98.26  E-value=1.5e-05  Score=82.01  Aligned_cols=180  Identities=17%  Similarity=0.200  Sum_probs=116.8

Q ss_pred             CHHHHHHHHHHHHHHHCCCC-cCCcc---EEEEEeccCCCC------------------C--------c-cHHHHHHHHh
Q 013297           52 DVISMSLTAVTNLLEKYKID-PKQIG---RLEVGSETVIDK------------------S--------K-SIKTFLMQIF  100 (446)
Q Consensus        52 d~~~lA~~Aa~~aL~~agi~-~~dId---~li~~T~t~~~~------------------~--------p-s~a~~l~~~L  100 (446)
                      ....+++.|+.++|+++|++ ....+   .++++|..+...                  .        + ..+..+...+
T Consensus        70 ~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~~  149 (412)
T COG0304          70 RFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVF  149 (412)
T ss_pred             HHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHHh
Confidence            46789999999999999997 33332   223444332110                  1        1 3566788888


Q ss_pred             cccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecC-c------c--------C-CC---CCC----
Q 013297          101 EKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-V------Y--------A-EG---PAR----  157 (446)
Q Consensus       101 Gl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~-~------y--------~-~~---~~~----  157 (446)
                      |+.|    +.+.+..||+++..|+..|.++|+.|..  +.+|+.++|.. .      |        . +.   ..+    
T Consensus       150 g~~G----~~~~~~tACatg~~AIg~A~~~I~~G~a--d~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrPfd~  223 (412)
T COG0304         150 GLKG----PNYTPVTACATGAHAIGDAVRLIRLGKA--DVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDK  223 (412)
T ss_pred             CCCC----CcCChhhhHHhHHHHHHHHHHHHHcCCC--CEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCCCCC
Confidence            8733    4567789999999999999999999987  99999999773 1      1        1 11   112    


Q ss_pred             ----ccccccceeeeeccCCC-c----ccccccccccc-cccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHH
Q 013297          158 ----PTGGAAAVVMLVGPDAP-V----AFESKLRGSHM-SHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSK  227 (446)
Q Consensus       158 ----~t~GdGAvA~Ll~~~~~-~----~~~~~~~g~~~-~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~  227 (446)
                          ...|.||+++||+.-+. .    .+.-.+.|... .+.++.-.|.     |  +|.--        .++++..++.
T Consensus       224 ~RdGfv~gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~~~Da~h~t~P~-----p--~g~Ga--------~~am~~AL~~  288 (412)
T COG0304         224 NRDGFVIGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPA-----P--DGEGA--------IRAMRAALAD  288 (412)
T ss_pred             CCCCEEEecceeEEEecChhhHHhCCCceEEEEEEEEecccccccCCCC-----C--CCchH--------HHHHHHHHHH
Confidence                35799999999998652 1    11112333332 2333333443     2  34321        2455566666


Q ss_pred             hhhhhCCCCCcCCCceeeccCcchHHHHHHH
Q 013297          228 YEKLEGKQFSLSNADYFVFHSPYNKLVQKSF  258 (446)
Q Consensus       228 ~~~~~~~~~~~~did~~i~H~p~~~~~~~~~  258 (446)
                      .      +++++||||+..|-..++..++.-
T Consensus       289 A------gl~~~~idYinaHgTsT~~nD~~E  313 (412)
T COG0304         289 A------GLTPEDIDYINAHGTSTPANDKAE  313 (412)
T ss_pred             c------CCCHhHCCEEeCCCccCCCccHHH
Confidence            5      899999999999987776666543

>PRK07937 lipid-transfer protein; Provisional

Probab=98.01  E-value=3.3e-05  Score=78.34  Aligned_cols=106  Identities=13%  Similarity=0.077  Sum_probs=71.1

Q ss_pred             EEeecceEEecCCCCCCH-HHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeC
Q 013297           36 TIGLGQECMAFCSEVEDV-ISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST  114 (446)
Q Consensus        36 ~~Glg~r~~av~~~~Ed~-~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~  114 (446)
                      -.|+|+..+...++..+. .+|+.+|++++|+++|++++|||.++.++.-...........+...+|+  .+..+..-+.
T Consensus         6 IvG~g~t~~~~~~~~~~~~~el~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~~~~~~~~~~~~~~G~--~~~~~~~~v~   83 (352)
T PRK07937          6 VVGFAQAPHVRRTDGTTNGVEMLMPCFAELYAELGITKSDIGFWCSGSSDYLAGRAFSFISAIDSIGA--VPPINESHVE   83 (352)
T ss_pred             EEEeeccccccCCCCCCcHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccccccccccchhhHHhhccC--CCCCceEEec
Confidence            468887776532223333 8999999999999999999999988544321111111112334456675  2333333333


Q ss_pred             CcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeec
Q 013297          115 NACYGGTAALFNCVNWVESSSWDGRYGLVVCTDS  148 (446)
Q Consensus       115 ~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~  148 (446)
                         .++..||..|...|++|.+  +.|||++.+.
T Consensus        84 ---~~g~~a~~~A~~aI~sG~~--d~VLv~g~~k  112 (352)
T PRK07937         84 ---MDAAWALYEAWVKLLTGEV--DTALVYGFGK  112 (352)
T ss_pred             ---CcHHHHHHHHHHHHhcCCC--CEEEEEEecc
Confidence               3577799999999999988  9999999874

>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]

Probab=97.84  E-value=4.3e-05  Score=72.35  Aligned_cols=110  Identities=19%  Similarity=0.151  Sum_probs=86.6

Q ss_pred             cceeEEeecceEEecCC--CCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCce
Q 013297           32 KGKYTIGLGQECMAFCS--EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIE  109 (446)
Q Consensus        32 ~~k~~~Glg~r~~av~~--~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~  109 (446)
                      +.-|..|+|..++--+.  ++-|-.+|+.+|..++|+++++.-++|+--+++-..++.-.   ..+-.-.+|+   +.++
T Consensus         6 ~rvyvvgvgmtkf~kpg~~~~~dypd~a~ea~tkal~da~ikys~vqqa~vgyvfgdstc---gqraiyevgm---tgip   79 (408)
T KOG1406|consen    6 PRVYVVGVGMTKFEKPGRVADWDYPDFAKEAITKALQDAGIKYSEVQQAVVGYVFGDSTC---GQRAIYEVGM---TGIP   79 (408)
T ss_pred             ceEEEEecceeeecCCCcccCCCCchHHHHHHHHHHHhcCCCHHHHHhhhheeeecCCcc---chHHHHhccc---cCcc
Confidence            34467899988854322  35678999999999999999999999887776655554322   2222236776   6789


Q ss_pred             eeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecC
Q 013297          110 GVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA  149 (446)
Q Consensus       110 ~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~  149 (446)
                      .+.++|+|++|..||.+|...|++|..  +.||..+-|..
T Consensus        80 i~nvnnncatgssalflakqiiesgn~--dcvlalgfekm  117 (408)
T KOG1406|consen   80 IYNVNNNCATGSSALFLAKQIIESGNS--DCVLALGFEKM  117 (408)
T ss_pred             eeeccCccccCchHHHHHHHHHhcCCc--ceEEeechhhh
Confidence            999999999999999999999999977  89999998887

>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.57  E-value=0.00035  Score=69.02  Aligned_cols=231  Identities=16%  Similarity=0.175  Sum_probs=137.0

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhc----CCCc---cee-----EEeecceEEe----cCCCC----CCHHHHHHHHHH
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHD----GASK---GKY-----TIGLGQECMA----FCSEV----EDVISMSLTAVT   62 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~----g~~~---~k~-----~~Glg~r~~a----v~~~~----Ed~~~lA~~Aa~   62 (446)
                      +.|-|.++|...|=-.=...-|....    |+..   ..|     +..=...++.    |...+    -+...||+.|++
T Consensus        24 rRVVITGmG~VTplG~~v~~~w~~Ll~GesGI~~l~~~d~k~~p~~v~g~Ip~f~~e~~~s~~~~r~ms~~~~~al~aa~  103 (440)
T KOG1394|consen   24 RRVVITGMGAVTPLGNGVHTSWRNLLSGESGISSLEGPDYKSIPFTVAGKIPRFSVEDYVSKGDERRMSKFTKLALTAAE  103 (440)
T ss_pred             eeEEEeccceeecCCCChHHHHHHhhccccCcccccccccccCcchheeeccccccccccchhhhhhhhHHHHHHHHHHH
Confidence            46889999999987764444554433    2211   011     0000000111    10111    145779999999


Q ss_pred             HHHHHCCCCcC---Ccc----EEEEEeccCC---------------------CCCc-----cHHHHHHHHhcccCCCCce
Q 013297           63 NLLEKYKIDPK---QIG----RLEVGSETVI---------------------DKSK-----SIKTFLMQIFEKFGNTDIE  109 (446)
Q Consensus        63 ~aL~~agi~~~---dId----~li~~T~t~~---------------------~~~p-----s~a~~l~~~LGl~g~~~~~  109 (446)
                      ++|+++++-+.   +.|    .+.++|.-+.                     +..|     -.+.+|.-++|+-|    +
T Consensus       104 eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm~~gl~G----p  179 (440)
T KOG1394|consen  104 EALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSMKYGLRG----P  179 (440)
T ss_pred             HHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhhhhcCcC----C
Confidence            99999997544   233    2334444321                     1122     13567888888733    3


Q ss_pred             eeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCc-------c---------CCCC---CCc--------cccc
Q 013297          110 GVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-------Y---------AEGP---ARP--------TGGA  162 (446)
Q Consensus       110 ~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-------y---------~~~~---~~~--------t~Gd  162 (446)
                      ...++.||+.+.+++-.|.++|+.|..  +..|.-++|.+.       |         .+.|   +||        ..|.
T Consensus       180 nhsvSTACATg~h~igda~n~Ir~Gda--DvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD~~RdGFVmGE  257 (440)
T KOG1394|consen  180 NHSVSTACATGNHCIGDAFNFIRLGDA--DVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFDKKRDGFVMGE  257 (440)
T ss_pred             chhhHhhhhhccchHHHHHHHHHhCcc--ceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCCCccCCCceeecc
Confidence            456789999999999999999999965  777777788761       1         1111   233        4799


Q ss_pred             cceeeeeccCCC-----cccccccccc-cccccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCC
Q 013297          163 AAVVMLVGPDAP-----VAFESKLRGS-HMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQF  236 (446)
Q Consensus       163 GAvA~Ll~~~~~-----~~~~~~~~g~-~~~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~  236 (446)
                      ||+.+|++.-+.     ..|...+.|. .+.|.+....|.       .||.-.    .    .|+++.++..      ++
T Consensus       258 GagvlvlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~-------~dG~Ga----~----~am~raL~~A------gl  316 (440)
T KOG1394|consen  258 GAGVLVLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPD-------PDGAGA----V----LAMERALKDA------GL  316 (440)
T ss_pred             ceeEEehHhHHHHHHcCCceeHHhhcCcccccccccCCCC-------CCcchH----H----HHHHHHHHHc------CC
Confidence            999999986321     1111112332 223444444443       355432    1    2444555554      89


Q ss_pred             CcCCCceeeccCcchHHHHHHHHH
Q 013297          237 SLSNADYFVFHSPYNKLVQKSFAR  260 (446)
Q Consensus       237 ~~~did~~i~H~p~~~~~~~~~~~  260 (446)
                      .++||||+-.|..++.+.+.+-..
T Consensus       317 ~pe~i~YvNAHATST~~GD~aE~~  340 (440)
T KOG1394|consen  317 SPEDIDYVNAHATSTPLGDAAEAE  340 (440)
T ss_pred             ChhhcCeeecccccCcCchHHHHH
Confidence            999999999999888877765433

>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=97.53  E-value=0.0029  Score=72.97  Aligned_cols=174  Identities=14%  Similarity=0.112  Sum_probs=117.4

Q ss_pred             HHHHHHHHHHHHCCCCcCCcc----EEEEEeccCCCCCc-------------------cHHHHHHHHhcccCCCCceeee
Q 013297           56 MSLTAVTNLLEKYKIDPKQIG----RLEVGSETVIDKSK-------------------SIKTFLMQIFEKFGNTDIEGVD  112 (446)
Q Consensus        56 lA~~Aa~~aL~~agi~~~dId----~li~~T~t~~~~~p-------------------s~a~~l~~~LGl~g~~~~~~~d  112 (446)
                      |..+.+-++|+++|++++.+.    .|+.+....+|...                   -++++|...|++.    -+.+.
T Consensus        94 llLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l~----GPs~~  169 (1061)
T COG3321          94 LLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGLS----GPSVT  169 (1061)
T ss_pred             HHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHHhcCC----CCCcc
Confidence            888999999999999999888    46666665554432                   1577889999983    45678


Q ss_pred             eCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCc-------cC-------CC--------CCCccccccceeeeec
Q 013297          113 STNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-------YA-------EG--------PARPTGGAAAVVMLVG  170 (446)
Q Consensus       113 i~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-------y~-------~~--------~~~~t~GdGAvA~Ll~  170 (446)
                      |..+|++.+.|+.+|...|.+|.+  ..+|+-+..+..       +.       ++        .+....|.|+++++|.
T Consensus       170 vdtaCSSsLvAvhlA~~sL~~Ge~--d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~adG~v~geG~g~vvLK  247 (1061)
T COG3321         170 VDTACSSSLVAVHLACQSLRLGEC--DLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADGYVRGEGAGVVVLK  247 (1061)
T ss_pred             ccchhhHHHHHHHHHHHHHHcCCC--CEEEecceEeccCCcceeeeecccCcCCCCcceecccCCCCEEEeeeEEEEEEE
Confidence            899999999999999999999977  888887776641       11       11        1124579999999998


Q ss_pred             cCCCc-----cccccccccccccc---ccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCCc
Q 013297          171 PDAPV-----AFESKLRGSHMSHA---YDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNAD  242 (446)
Q Consensus       171 ~~~~~-----~~~~~~~g~~~~~~---~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~did  242 (446)
                      +-...     .+..-+.|+-..+.   ..+..|+                 ..+-..+++..++..      ++.+++|+
T Consensus       248 rl~~A~~dgd~IyavI~gsavn~dG~~~gltaP~-----------------~~aQ~~v~~~al~~a------~i~p~tv~  304 (1061)
T COG3321         248 RLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPN-----------------LEAQADVIREALADA------GIDPATVQ  304 (1061)
T ss_pred             EhHHHHhCCCeEEEEEEeeeeccCCCcCCCCCCC-----------------HHHHHHHHHHHHHhc------CCCcccCc
Confidence            75431     11111222221110   0111221                 122233444455554      89999999


Q ss_pred             eeeccCcchHHHHHHH
Q 013297          243 YFVFHSPYNKLVQKSF  258 (446)
Q Consensus       243 ~~i~H~p~~~~~~~~~  258 (446)
                      |+=.|...+.+.+-+.
T Consensus       305 yvEaHgTGT~lGDpiE  320 (1061)
T COG3321         305 YVEAHGTGTPLGDPIE  320 (1061)
T ss_pred             EEEecCCCCCCcCHHH
Confidence            9999998888776553

>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]

Probab=97.35  E-value=0.00077  Score=69.46  Aligned_cols=94  Identities=14%  Similarity=0.123  Sum_probs=73.5

Q ss_pred             HHHHHHHHHHHHHHHC--CCCcCCccEEEEEeccCCC-CCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHH
Q 013297           53 VISMSLTAVTNLLEKY--KIDPKQIGRLEVGSETVID-KSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN  129 (446)
Q Consensus        53 ~~~lA~~Aa~~aL~~a--gi~~~dId~li~~T~t~~~-~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~  129 (446)
                      ..++.....+..+++.  ++++.+||-+++++..+.. .....+..+....|+  ..+++++.++.+|.++..|+..|..
T Consensus        27 ~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl--~~~~p~~~V~~~c~SG~~Av~~A~~  104 (392)
T COG0183          27 AEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGL--PGSVPAVTVNRACASGLAAVRLAAQ  104 (392)
T ss_pred             HHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCC--CCCCCceEEeccchhHHHHHHHHHH
Confidence            4444444444444432  4666678888988666542 355788899999998  4569999999999999999999999


Q ss_pred             HHHcCCCCCCEEEEEEeecCc
Q 013297          130 WVESSSWDGRYGLVVCTDSAV  150 (446)
Q Consensus       130 ~l~sg~~~~~~aLVVasD~~~  150 (446)
                      .|++|..  +.+|+++.|..+
T Consensus       105 ~I~sG~~--dvvlagG~E~mS  123 (392)
T COG0183         105 AIASGEA--DVVLAGGVEKMS  123 (392)
T ss_pred             HHHCCCC--CEEEEEeeeecc
Confidence            9999977  999999999884

>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]

Probab=96.19  E-value=0.013  Score=57.31  Aligned_cols=96  Identities=9%  Similarity=0.085  Sum_probs=77.2

Q ss_pred             CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHH
Q 013297           50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN  129 (446)
Q Consensus        50 ~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~  129 (446)
                      .-.+.+|+.-|.+.+|+++++++++++-+|++....-...-..+....---||  +.++.+..++.-|++++-|+.+|..
T Consensus        27 sl~A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGl--p~sv~~tTvNkvCaSgmKAv~laaQ  104 (396)
T KOG1390|consen   27 SLTATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGL--PYSVPATTVNKVCASGMKAVILAAQ  104 (396)
T ss_pred             cCchhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCC--CcceeeEeehhhhhhhHHHHHHHHH
Confidence            45688999999999999999999999999988765443333444444444465  5678899999999999999999999


Q ss_pred             HHHcCCCCCCEEEEEEeecC
Q 013297          130 WVESSSWDGRYGLVVCTDSA  149 (446)
Q Consensus       130 ~l~sg~~~~~~aLVVasD~~  149 (446)
                      -|..|..  +.++..+.|.+
T Consensus       105 sI~~G~~--divVaGGmEsM  122 (396)
T KOG1390|consen  105 SIQTGHA--DIVVAGGMESM  122 (396)
T ss_pred             HHhcCCc--cEEEecccchh
Confidence            9999965  77777777776

>PRK06025 acetyl-CoA acetyltransferase; Provisional

Probab=96.11  E-value=0.014  Score=60.34  Aligned_cols=88  Identities=15%  Similarity=0.177  Sum_probs=56.7

Q ss_pred             HHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhH
Q 013297          219 TCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDL  298 (446)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~  298 (446)
                      .+.+..+++.      +++++|||++-+|++|..+.....+.+                        |++.+++..+   
T Consensus       319 ~Ai~~aL~~A------Gl~~~DID~~ei~eaFa~~~l~~~~~l------------------------g~~~~~vN~~---  365 (417)
T PRK06025        319 PAAKKVLAKA------GLTKDDIDLWEINEAFAVVAEKFIRDL------------------------DLDRDKVNVN---  365 (417)
T ss_pred             HHHHHHHHHc------CCCHHHCcEEEEchHHHHHHHHHHHHc------------------------CCChhhcccc---
Confidence            3555666665      899999999999999998887777766                        5544332111   


Q ss_pred             HHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEec
Q 013297          299 EKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYG  358 (446)
Q Consensus       299 ~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syG  358 (446)
                                      --.+.+..-+|+++...+...+..+.++ + .+.| .+.+++.|
T Consensus       366 ----------------GG~ia~GHp~GaTGa~~v~~ll~qL~~~-g-~~~G-l~~~c~~G  406 (417)
T PRK06025        366 ----------------GGAIALGHPIGATGSILIGTVLDELERR-G-LKRG-LVTMCAAG  406 (417)
T ss_pred             ----------------CCHHhcCCchhHHHHHHHHHHHHHHHHh-C-CCeE-EEEEEeec
Confidence                            0111234577888888888888777665 3 3445 44444444

>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]

Probab=96.06  E-value=0.0084  Score=56.95  Aligned_cols=97  Identities=12%  Similarity=0.130  Sum_probs=77.0

Q ss_pred             CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcc-cC-CCCceeeeeCCcChhHHHHHHHH
Q 013297           50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK-FG-NTDIEGVDSTNACYGGTAALFNC  127 (446)
Q Consensus        50 ~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl-~g-~~~~~~~di~~aC~gg~~AL~~A  127 (446)
                      +-+..+|.+.|++.+|+.+++.++.+|.+|++....   +.+..-|+.++.|| .| +.+.+++.++-=|.+|..++-++
T Consensus        25 g~~aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~a---SSsDgIYl~RHvGL~~GvP~e~pALtiNRLCGSGFQsiVNg  101 (396)
T KOG1391|consen   25 GLSATDLGVVAAKAALKAANVGAEAVDHVIMGNVLA---SSSDGIYLARHVGLRVGVPKETPALTINRLCGSGFQSIVNG  101 (396)
T ss_pred             CcchhhHHHHHHHHHHhhcCCChhhcceEEEeeeee---ccCCceEeeeccccccCCcCccCceeehhhhcccHHHHHhh
Confidence            456789999999999999999999999999876432   11234567777766 12 35678999999999999999999


Q ss_pred             HHHHHcCCCCCCEEEEEEeecCcc
Q 013297          128 VNWVESSSWDGRYGLVVCTDSAVY  151 (446)
Q Consensus       128 ~~~l~sg~~~~~~aLVVasD~~~y  151 (446)
                      ..-|.-|..  +.+|.-++|.++-
T Consensus       102 aQ~I~vgea--~ivL~GGtEnMSq  123 (396)
T KOG1391|consen  102 AQEICVGEA--EIVLCGGTENMSQ  123 (396)
T ss_pred             HHHhhcCcc--eEEEecCcccccc
Confidence            999999866  7888778887743

>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain

Probab=96.04  E-value=0.11  Score=49.17  Aligned_cols=116  Identities=16%  Similarity=0.100  Sum_probs=79.5

Q ss_pred             CHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCC---------------CCcc-----HHHHHHHHhcccCCCCceee
Q 013297           52 DVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVID---------------KSKS-----IKTFLMQIFEKFGNTDIEGV  111 (446)
Q Consensus        52 d~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~---------------~~ps-----~a~~l~~~LGl~g~~~~~~~  111 (446)
                      ...-|++.++..++++.    +++|.+|++|..|+-               .+|.     +=+-+...+.+.-.......
T Consensus        33 ~~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~~~~~t  108 (218)
T PF13723_consen   33 RLSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKNTGPNT  108 (218)
T ss_pred             HHHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCCCCceE
Confidence            37889999999998653    467899999887732               2331     11112223333111344566


Q ss_pred             eeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCc---cCCCC-CCccccccceeeeeccCCC
Q 013297          112 DSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV---YAEGP-ARPTGGAAAVVMLVGPDAP  174 (446)
Q Consensus       112 di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~---y~~~~-~~~t~GdGAvA~Ll~~~~~  174 (446)
                      -+..+=.++-.||.-|..+++.| .  +.||||+.|-..   |.... .+.....-|+|++|+++..
T Consensus       109 al~a~~~sf~~aLleA~~~l~~~-~--~~VLlv~~De~~p~~y~~~~~~~~~~~~~A~al~L~~~~~  172 (218)
T PF13723_consen  109 ALAAGEDSFEAALLEAAAQLAEG-A--EPVLLVCYDEPLPEPYQEFRPERDPPFPYALALVLSPGDS  172 (218)
T ss_pred             EEecCcchHHHHHHHHHHHHHcC-C--CCEEEEEeCCCCChhhhhcccccCCCcCEEEEEEecCCCC
Confidence            67778889999999999999998 5  899999999873   33322 2344466789999998764

>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]

Probab=96.00  E-value=0.0054  Score=59.05  Aligned_cols=84  Identities=17%  Similarity=0.135  Sum_probs=71.2

Q ss_pred             CCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHH
Q 013297           51 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNW  130 (446)
Q Consensus        51 Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~  130 (446)
                      --+.+|+.+|...+|++..++.+.||.||++|.-.......++..-+-.-|.  +..+++-.+..+|-+.-.|+-....+
T Consensus        64 lmphdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agf--sdktpahtvtmacissn~amttgmgl  141 (465)
T KOG1392|consen   64 LMPHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGF--SDKTPAHTVTMACISSNVAMTTGMGL  141 (465)
T ss_pred             hchhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCC--CCCCccceeeeehhccchhhhcccee
Confidence            3468999999999999999999999999999987766554555555555576  56788889999999999999999999


Q ss_pred             HHcCCC
Q 013297          131 VESSSW  136 (446)
Q Consensus       131 l~sg~~  136 (446)
                      |++|.+
T Consensus       142 iatg~~  147 (465)
T KOG1392|consen  142 IATGNA  147 (465)
T ss_pred             EeeCCc
Confidence            999976

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=93.85  E-value=0.64  Score=53.10  Aligned_cols=182  Identities=15%  Similarity=0.226  Sum_probs=106.3

Q ss_pred             HHHHHHHHHHHHHHHCCCCcCCccE----EEEE---eccCCC--CCc------c----HHHHHHHHhcccCCCCceeeee
Q 013297           53 VISMSLTAVTNLLEKYKIDPKQIGR----LEVG---SETVID--KSK------S----IKTFLMQIFEKFGNTDIEGVDS  113 (446)
Q Consensus        53 ~~~lA~~Aa~~aL~~agi~~~dId~----li~~---T~t~~~--~~p------s----~a~~l~~~LGl~g~~~~~~~di  113 (446)
                      -+-|-.+|.-+++-++|++|.++..    +.++   ++|...  ..|      +    .-++..+++-..=.-.-+.+.+
T Consensus        87 q~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDfqGPS~s~  166 (2376)
T KOG1202|consen   87 QLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQGPSFSV  166 (2376)
T ss_pred             HHHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEeccCCchhh
Confidence            4779999999999999999987653    2222   222111  111      1    1122222221100001234445


Q ss_pred             CCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCc-------c-------CCCCCC--------ccccccceeeeecc
Q 013297          114 TNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-------Y-------AEGPAR--------PTGGAAAVVMLVGP  171 (446)
Q Consensus       114 ~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-------y-------~~~~~~--------~t~GdGAvA~Ll~~  171 (446)
                      ..+|++.+.||+.|.+-+++|++  ..+||-+.....       |       .+++.+        ..-.||.+|+||.+
T Consensus       167 DtacsSsl~al~~a~~~~r~gqc--d~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeagnGY~Rseg~~avllqr  244 (2376)
T KOG1202|consen  167 DTACSSSLMALQNAFQDIRSGQC--DAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAGNGYCRSEGVVAVLLQR  244 (2376)
T ss_pred             hhhhHHHHHHHHHHHHhhhccCC--chhhhcccceEeccchhhHHHHhcCcCCCCcccchhccCCceeecCceEEEEEeh
Confidence            57999999999999999999988  889988877641       1       122222        23578999999998


Q ss_pred             CCCc-ccccccccccccccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCCceeeccCcc
Q 013297          172 DAPV-AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPY  250 (446)
Q Consensus       172 ~~~~-~~~~~~~g~~~~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~  250 (446)
                      .... ++-..+.... .+ .|-+|.. +..||  +|+...    .-+++.|.          +.|+.++++-|+=.|-.+
T Consensus       245 k~~ArRvYAtilnar-tN-TDGfKEq-GvTfP--~G~~Q~----qLi~e~Ys----------e~Gl~P~sv~YvEAHGtG  305 (2376)
T KOG1202|consen  245 KSLARRVYATILNAR-TN-TDGFKEQ-GVTFP--SGDMQE----QLIRETYS----------EAGLNPESVVYVEAHGTG  305 (2376)
T ss_pred             hHHHHHHHHHhhccc-cC-CCchhhc-CccCC--CcHHHH----HHHHHHHH----------hcCCCcccEEEEEeccCC
Confidence            7531 1110011011 11 2334443 45566  465421    12333332          238999999999999988


Q ss_pred             hHHHH
Q 013297          251 NKLVQ  255 (446)
Q Consensus       251 ~~~~~  255 (446)
                      +|..+
T Consensus       306 TkVGD  310 (2376)
T KOG1202|consen  306 TKVGD  310 (2376)
T ss_pred             CCCCC
Confidence            87654

>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2

Probab=93.72  E-value=0.13  Score=41.26  Aligned_cols=72  Identities=15%  Similarity=0.087  Sum_probs=41.9

Q ss_pred             HHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeC----CcChhHHHHHHHHHHHHHcCC-CCCC
Q 013297           65 LEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST----NACYGGTAALFNCVNWVESSS-WDGR  139 (446)
Q Consensus        65 L~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~----~aC~gg~~AL~~A~~~l~sg~-~~~~  139 (446)
                      |+++|++++|||.+++...+     +.....+.+.+|+  ++.....++.    .+|++-..+|..   .++.|. .||+
T Consensus         1 L~~~g~~~~did~~i~hq~~-----~~~~~~~~~~lgi--~~~~~~~~~~~~Gn~~sa~~~~~L~~---~~~~g~~~~Gd   70 (90)
T PF08541_consen    1 LERAGLSPDDIDHFIPHQAS-----KKILDSIAKRLGI--PPERFPDNLAEYGNTGSASIPINLAD---ALEEGRIKPGD   70 (90)
T ss_dssp             HHHTT--GGGESEEEE-SSS-----HHHHHHHHHHHTS---GGGBE-THHHH-B-GGGHHHHHHHH---HHHTTSSCTTE
T ss_pred             CccccCCHHHCCEEEeCCCC-----HHHHHHHHHHcCC--cHHHHHHHHhccCcchhhhHHHHHHH---HHHcCCCCCCC
Confidence            68999999999999975533     3445568889997  4332222332    244444444444   455443 2678


Q ss_pred             EEEEEEe
Q 013297          140 YGLVVCT  146 (446)
Q Consensus       140 ~aLVVas  146 (446)
                      ++|+++.
T Consensus        71 ~vl~~~~   77 (90)
T PF08541_consen   71 RVLLVGF   77 (90)
T ss_dssp             EEEEEEE
T ss_pred             EEEEEEE
Confidence            9999874

3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....

>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]

Probab=93.29  E-value=0.21  Score=48.93  Aligned_cols=95  Identities=15%  Similarity=0.225  Sum_probs=75.5

Q ss_pred             CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHh-cccCCCCceeeeeCCcChhHHHHHHHHH
Q 013297           50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIF-EKFGNTDIEGVDSTNACYGGTAALFNCV  128 (446)
Q Consensus        50 ~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~L-Gl~g~~~~~~~di~~aC~gg~~AL~~A~  128 (446)
                      +..+-+|...+.+..+++.+++|+.|+-|+++|.-..-.. .+.++++..+ |+  +..++...++--|++|+.|+...+
T Consensus        58 dt~pDeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~g-a~e~R~a~~~ag~--P~tvpv~tvNRqCsSGLqaVadiA  134 (435)
T KOG1389|consen   58 DTRPDELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSG-ASECRMAAFYAGF--PETVPVRTVNRQCSSGLQAVADIA  134 (435)
T ss_pred             cCChHHHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcc-hHHHHHHHHHcCC--CcccchhhhhhhhhhHHHHHHHHH
Confidence            3445688889999999999999999999999998765533 5555555554 44  455667777789999999999999


Q ss_pred             HHHHcCCCCCCEEEEEEeecC
Q 013297          129 NWVESSSWDGRYGLVVCTDSA  149 (446)
Q Consensus       129 ~~l~sg~~~~~~aLVVasD~~  149 (446)
                      .-|++|.+  +-.|-.+.|.+
T Consensus       135 ~~Ir~G~y--dIGla~GvESM  153 (435)
T KOG1389|consen  135 AKIRAGFY--DIGLAAGVESM  153 (435)
T ss_pred             HHHhcCce--eeecccchhhh
Confidence            99999988  77777777765

>PRK07850 acetyl-CoA acetyltransferase; Provisional

Probab=92.32  E-value=1.6  Score=44.94  Aligned_cols=124  Identities=16%  Similarity=0.164  Sum_probs=65.5

Q ss_pred             ccHHHHHHhcCCCc-ceeEEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHH
Q 013297           19 VQQEALEAHDGASK-GKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLM   97 (446)
Q Consensus        19 v~~~~l~~~~g~~~-~k~~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~   97 (446)
                      |..++.++..+.++ .++ .|.+..  . ..+ .....-...|++++|+++|++++|||.+.+.     +..+...-...
T Consensus       253 l~see~A~~l~~~p~~~i-~g~~~~--~-~~~-~~~~~~~~~a~~~al~~agl~~~did~~ei~-----d~F~~~~l~~~  322 (387)
T PRK07850        253 WMDEDRARALGLRPRARI-VAQALV--G-AEP-YYHLDGPVQATAKVLEKAGMKIGDIDLVEIN-----EAFASVVLSWA  322 (387)
T ss_pred             EecHHHHHHcCCCCcEEE-EEEEEe--c-cCc-hhhcchHHHHHHHHHHHcCCCHHHcCeeeec-----ccchHHHHHHH
Confidence            34445566556544 333 344321  1 111 1223445789999999999999999999873     22223333444


Q ss_pred             HHhcccCCCCceeeeeC---------CcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCccCCCCCCccccccceeee
Q 013297           98 QIFEKFGNTDIEGVDST---------NACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVML  168 (446)
Q Consensus        98 ~~LGl~g~~~~~~~di~---------~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~~~~~~~t~GdGAvA~L  168 (446)
                      +.||+  ...  .+.++         .+++|....+..+.. |+..  ++++.|+..+            ..|..+.|||
T Consensus       323 e~lg~--~~~--pvN~~GG~la~Ghp~gatG~~~v~e~~~q-L~~~--~~~~g~~~~c------------~~gg~g~a~~  383 (387)
T PRK07850        323 QVHEP--DMD--KVNVNGGAIALGHPVGSTGARLITTALHE-LERT--DKSTALITMC------------AGGALSTGTI  383 (387)
T ss_pred             HHcCC--CCC--CcCCCCchhhcCCCcchhHHHHHHHHHHH-HHhc--CCCeEEEEEc------------cccCceeEEE
Confidence            67775  111  22222         244444444444444 4433  3477766532            2355566777


Q ss_pred             ecc
Q 013297          169 VGP  171 (446)
Q Consensus       169 l~~  171 (446)
                      |+.
T Consensus       384 ~e~  386 (387)
T PRK07850        384 IER  386 (387)
T ss_pred             EEe
Confidence            764

>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative

Probab=92.06  E-value=0.55  Score=47.57  Aligned_cols=95  Identities=15%  Similarity=0.142  Sum_probs=64.5

Q ss_pred             CHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCC-ce-ee---eeC-CcChhHHHHHH
Q 013297           52 DVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTD-IE-GV---DST-NACYGGTAALF  125 (446)
Q Consensus        52 d~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~-~~-~~---di~-~aC~gg~~AL~  125 (446)
                      .....+..+++++|+++|++++|||.+++....+     .+-..+.+.||+  .++ +. .+   +++ .++++...+|.
T Consensus       205 ~~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~~~-----~~~~~~~~~lgl--~~ek~~~~~~~~~~GNt~sAsipl~L~  277 (345)
T TIGR00748       205 AYFHHVVTAAKGLMEKLGLTPEDFDYAVFHQPNG-----KFYLVAARMLGF--PKEQVKPGLLTPRIGNTYSGATPVGLS  277 (345)
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHHcCEEEeCCCCh-----HHHHHHHHHcCC--CHHHeeccccccccCchhhhHHHHHHH
Confidence            4667778999999999999999999998743332     244457888997  322 21 11   444 36777777776


Q ss_pred             HHHHHHHcCCCCCCEEEEEEeecCccCCCCCCccccccc--eeeeecc
Q 013297          126 NCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAA--VVMLVGP  171 (446)
Q Consensus       126 ~A~~~l~sg~~~~~~aLVVasD~~~y~~~~~~~t~GdGA--vA~Ll~~  171 (446)
                      .+...++    +|+++|+++              ||.|.  .++++.-
T Consensus       278 ~~~~~~~----~Gd~vll~~--------------~G~G~s~~~~~~~~  307 (345)
T TIGR00748       278 AVLDIAE----PGDRILAVS--------------YGSGAGSDAFSIVV  307 (345)
T ss_pred             HHHHhcC----CCCEEEEEE--------------ecCCcceeEEEEEE
Confidence            6654332    678888887              66666  5666643

Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.

>PRK13359 beta-ketoadipyl CoA thiolase; Provisional

Probab=91.92  E-value=1.5  Score=45.42  Aligned_cols=126  Identities=15%  Similarity=0.191  Sum_probs=66.2

Q ss_pred             ccHHHHHHhcCCCc-ceeEEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHH
Q 013297           19 VQQEALEAHDGASK-GKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLM   97 (446)
Q Consensus        19 v~~~~l~~~~g~~~-~k~~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~   97 (446)
                      |..++.++.+|..+ .++ .|.+...  . +++.... -...|++++|+++|++++|||.+.+     .|......-...
T Consensus       264 L~s~e~A~~~g~~~~a~I-~g~~~~~--~-~p~~~~~-~~~~A~~~al~~AGl~~~DID~iei-----~dafa~~~l~~~  333 (400)
T PRK13359        264 LASEAAARRHGLKPRARV-LGIATAG--V-EPRVMGI-GPAPATQKLLARLGMTLDQFDVIEL-----NEAFASQGLAVL  333 (400)
T ss_pred             EecHHHHHHCCCCccEEE-EEEEEec--C-CCCccch-hHHHHHHHHHHHhCCCHHHcCcCcc-----CcHhHHHHHHHH
Confidence            34445555555544 333 3444432  1 2332222 3368999999999999999999983     122223344556


Q ss_pred             HHhcccCCCCceeeeeCC---------cChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCccCCCCCCccccccceeee
Q 013297           98 QIFEKFGNTDIEGVDSTN---------ACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVML  168 (446)
Q Consensus        98 ~~LGl~g~~~~~~~di~~---------aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~~~~~~~t~GdGAvA~L  168 (446)
                      +.||+.  ..-..+..+.         +++|....+..+.. |+..  ++++.|+..+            ..|..+.|||
T Consensus       334 e~lg~~--~~~~pvN~~GG~la~GHp~gasG~~~v~e~~~q-L~~~--~~~~g~~~~c------------~~gG~g~a~~  396 (400)
T PRK13359        334 RELGLA--DDDARVNPNGGAIALGHPLGASGARLVTTALYQ-LERT--GGRFALCTMC------------IGVGQGIAIA  396 (400)
T ss_pred             HHcCCC--CCCCCEECCCchhhcCCchhHHHHHHHHHHHHH-Hhhc--CCCeEEEEEc------------ccCCceeEEE
Confidence            778862  1112233322         33444433344433 3333  4577666442            2355566777


Q ss_pred             ecc
Q 013297          169 VGP  171 (446)
Q Consensus       169 l~~  171 (446)
                      |++
T Consensus       397 ie~  399 (400)
T PRK13359        397 IER  399 (400)
T ss_pred             EEe
Confidence            764

>PRK08242 acetyl-CoA acetyltransferase; Validated

Probab=91.69  E-value=1.4  Score=45.76  Aligned_cols=128  Identities=13%  Similarity=0.092  Sum_probs=70.8

Q ss_pred             ccHHHHHHhcCCCc-ceeEEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHH
Q 013297           19 VQQEALEAHDGASK-GKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLM   97 (446)
Q Consensus        19 v~~~~l~~~~g~~~-~k~~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~   97 (446)
                      |..++.++.+|..+ .++ .|.+...  . ++.... .-...|++++|+++|++++|||.+.+.     +......-...
T Consensus       268 l~s~e~A~~~g~~p~a~I-~g~~~~~--~-~~~~~~-~~~~~a~~~al~~AGl~~~DID~~ei~-----daFa~~~l~~~  337 (402)
T PRK08242        268 IGSEEAGKALGLKPRARI-VATATIG--S-DPTIML-TGPVPATRKALAKAGLTVDDIDLFELN-----EAFASVVLRFM  337 (402)
T ss_pred             EecHHHHHHcCCCCcEEE-EEEEEec--C-Cchhhc-ccHHHHHHHHHHHcCCCHHHCCEEEec-----chhhHHHHHHH
Confidence            55567777778654 344 3444331  1 122111 112579999999999999999999852     22333444567


Q ss_pred             HHhcccC---CCCceeeeeC--CcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCccCCCCCCccccccceeeeecc
Q 013297           98 QIFEKFG---NTDIEGVDST--NACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGP  171 (446)
Q Consensus        98 ~~LGl~g---~~~~~~~di~--~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~~~~~~~t~GdGAvA~Ll~~  171 (446)
                      +.||+..   |.+--.+-++  .|++|....+.++..+-+.   ++++.|+-.+            ..|..++||||++
T Consensus       338 e~lG~~~~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~~~---~~~~g~~~~c------------~ggG~g~a~~~e~  401 (402)
T PRK08242        338 QALDIPHDKVNVNGGAIAMGHPLGATGAMILGTVLDELERR---GKRTALITLC------------VGGGMGIATIIER  401 (402)
T ss_pred             HHhCCCCcCCCcCCCHHhcCCcHHHHHHHHHHHHHHHHHhc---CCCeEEEEEc------------ccCCceeEEEEEe
Confidence            7888621   1111111122  3555555555555554332   3467666432            2466667888764

>PRK06205 acetyl-CoA acetyltransferase; Provisional

Probab=91.59  E-value=1.2  Score=46.13  Aligned_cols=75  Identities=9%  Similarity=0.014  Sum_probs=43.9

Q ss_pred             ccHHHHHHhcCCCcceeEEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHH
Q 013297           19 VQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQ   98 (446)
Q Consensus        19 v~~~~l~~~~g~~~~k~~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~   98 (446)
                      |..++.++..+..+-.+..|.+....   .+.... .-...|++++|+++|++++|||.+.+.     |......-...+
T Consensus       266 l~se~~A~~~~~~p~~~i~g~~~~~~---~~~~~~-~~~~~a~~~al~~Agl~~~Did~~ei~-----d~f~~~~l~~~e  336 (404)
T PRK06205        266 VTTEDKAEELGLRPLARLVSWAVAGV---EPSRMG-IGPVPATEKALARAGLTLDDIDLIELN-----EAFAAQVLAVLK  336 (404)
T ss_pred             EecHHHHHHCCCCceEEEEEEEEecc---CCcccc-ccHHHHHHHHHHHcCCCHHHCCEeeec-----cHHHHHHHHHHH
Confidence            44455566666555433335554421   122111 234689999999999999999999842     212233334556


Q ss_pred             Hhcc
Q 013297           99 IFEK  102 (446)
Q Consensus        99 ~LGl  102 (446)
                      .||+
T Consensus       337 ~lg~  340 (404)
T PRK06205        337 EWGF  340 (404)
T ss_pred             HhCc
Confidence            7776

>TIGR02430 pcaF beta-ketoadipyl CoA thiolase

Probab=91.12  E-value=1.4  Score=45.59  Aligned_cols=74  Identities=11%  Similarity=0.099  Sum_probs=43.6

Q ss_pred             ccHHHHHHhcCCCc-ceeEEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHH
Q 013297           19 VQQEALEAHDGASK-GKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLM   97 (446)
Q Consensus        19 v~~~~l~~~~g~~~-~k~~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~   97 (446)
                      |..++.++.+|..+ .++ .|.+....   .+..+.. -...|++++|+++|++++|||.+.+     .|..+...-...
T Consensus       264 l~s~e~A~~~g~~~~~~I-~g~~~~~~---~~~~~~~-~~~~a~~~al~~Agl~~~DID~~ei-----~D~f~~~~l~~~  333 (400)
T TIGR02430       264 LASEEAVQRHGLTPRARI-LAAATAGV---EPRIMGI-GPVPATQKLLARAGLSIDQFDVIEL-----NEAFAAQALAVL  333 (400)
T ss_pred             EecHHHHHHCCCCccEEE-EEEEEecC---CCccccc-hHHHHHHHHHHHhCCCHHHCCCccc-----CcHHHHHHHHHH
Confidence            44455555556443 343 34444321   2222222 2358999999999999999999983     222333344566


Q ss_pred             HHhcc
Q 013297           98 QIFEK  102 (446)
Q Consensus        98 ~~LGl  102 (446)
                      +.||+
T Consensus       334 e~lG~  338 (400)
T TIGR02430       334 RELGL  338 (400)
T ss_pred             HHcCC
Confidence            77887

Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.

>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated

Probab=90.80  E-value=0.76  Score=46.60  Aligned_cols=90  Identities=12%  Similarity=-0.057  Sum_probs=55.5

Q ss_pred             HHHHHHHHHHHCCCCcCCccEEEE-EeccCCCCCccHHHHHHHHhcccCCCCceeeeeC---CcCh--hHHHHHHHHHHH
Q 013297           57 SLTAVTNLLEKYKIDPKQIGRLEV-GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST---NACY--GGTAALFNCVNW  130 (446)
Q Consensus        57 A~~Aa~~aL~~agi~~~dId~li~-~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~---~aC~--gg~~AL~~A~~~  130 (446)
                      ..++.+++|+++|+++++||.|+. +|.+... ....+..+.+.+|.. ....+....+   .-|.  +|...+-.+...
T Consensus       236 l~~ai~~AL~~agl~~~dId~v~ah~~gt~~~-d~~e~~A~~~~f~~~-~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~  313 (348)
T PRK06147        236 LTQAIRAALAEAGCGLEDMDYRIADLNGEQYR-FKEAALAEMRLFRVR-KEFFDLWHPAECIGEIGAAIGPALLGVALAA  313 (348)
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEcCCCCCccc-hHHHHHHHHHHhhhc-cCCCceecchHhhcchHHHHHHHHHHHHHHH
Confidence            458899999999999999999874 4444322 233445566667631 1122222222   2333  333444445566


Q ss_pred             HHcCCCCCCEEEEEEeec
Q 013297          131 VESSSWDGRYGLVVCTDS  148 (446)
Q Consensus       131 l~sg~~~~~~aLVVasD~  148 (446)
                      ++.|..|+.++||.+++-
T Consensus       314 ~~~g~~~g~~~L~~s~~d  331 (348)
T PRK06147        314 SRKGYGPGPNVLCHLSDD  331 (348)
T ss_pred             HHcCcCCCCcEEEEecCC
Confidence            677877889999998764

>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

Probab=90.74  E-value=1.3  Score=45.52  Aligned_cols=37  Identities=8%  Similarity=0.149  Sum_probs=26.5

Q ss_pred             HHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHh
Q 013297          219 TCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARL  261 (446)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l  261 (446)
                      .+.+..+++.      +++++|||++-.|-+|..+.....+.|
T Consensus       289 ~a~~~a~~~A------gi~~~did~~e~~d~f~~~~~~~~e~l  325 (386)
T cd00751         289 PAIPKALKRA------GLTLDDIDLIEINEAFAAQALACLKEL  325 (386)
T ss_pred             HHHHHHHHHc------CCCHHHcCEEEeechhHHHHHHHHHHh
Confidence            3444455554      799999999999999886655555555

They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.

>PLN02287 3-ketoacyl-CoA thiolase

Probab=90.51  E-value=1.4  Score=46.46  Aligned_cols=99  Identities=14%  Similarity=0.160  Sum_probs=58.7

Q ss_pred             HHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhH
Q 013297          219 TCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDL  298 (446)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~  298 (446)
                      .+.+..+++.      +++++|||++=.|-+|.-..--.++.|                        |+..+.+      
T Consensus       335 ~A~~~al~~A------gl~~~DID~~Ei~daFa~~~l~~~e~l------------------------G~~~~pv------  378 (452)
T PLN02287        335 VAIPAAVKAA------GLELDDIDLFEINEAFASQFVYCCKKL------------------------GLDPEKV------  378 (452)
T ss_pred             HHHHHHHHHc------CCCHHHCCEEEecchHHHHHHHHHHHc------------------------CCCcccc------
Confidence            4555555665      899999999999988887665555555                        4433221      


Q ss_pred             HHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCCCCCC--EEEEEEe-ccccceeeEEEEEeC
Q 013297          299 EKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGK--RVVLFSY-GSGLTATMFSLKLSE  372 (446)
Q Consensus       299 ~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~--~vll~sy-GsG~~~~~~~l~~~~  372 (446)
                           |.           +=- ..-+||...||=...+.+++.+ =+ +.|.  +.+|.+. +.|-...+++++..+
T Consensus       379 -----N~-----------sGG-~la~GHp~gAsG~~~v~~l~~q-L~-~~~~~~~~gl~~~c~ggG~g~a~~ie~~~  436 (452)
T PLN02287        379 -----NV-----------NGG-AIALGHPLGATGARCVATLLHE-MK-RRGKDCRFGVVSMCIGTGMGAAAVFERGD  436 (452)
T ss_pred             -----CC-----------CCc-HHhccCcHHHHHHHHHHHHHHH-HH-hcCCCCCeeEEEEccccCceeEEEEEecC
Confidence                 11           000 1357999888877777777665 11 2344  5555553 223344456666666

>PRK09052 acetyl-CoA acetyltransferase; Provisional

Probab=90.48  E-value=1.9  Score=44.63  Aligned_cols=74  Identities=7%  Similarity=0.044  Sum_probs=43.6

Q ss_pred             ccHHHHHHhcCCCcc-eeEEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHH
Q 013297           19 VQQEALEAHDGASKG-KYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLM   97 (446)
Q Consensus        19 v~~~~l~~~~g~~~~-k~~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~   97 (446)
                      +..++.++.+|..+- ++ .|.+...  . .+..... -...|++++|+++|++++|||.+.+     .|......-...
T Consensus       265 l~se~~a~~~g~~~~a~i-~g~~~~~--~-~~~~~~~-~~~~A~~~al~~Agi~~~did~~ei-----~D~f~~~~l~~~  334 (399)
T PRK09052        265 LVSEKALKQFNLTPLARF-VSFAVAG--V-PPEIMGI-GPIEAIPAALKQAGLKQDDLDWIEL-----NEAFAAQSLAVI  334 (399)
T ss_pred             EecHHHHHHCCCCeeEEE-EEEEEec--c-CCCccch-hHHHHHHHHHHHcCCCHHHcCEEEe-----CcHHHHHHHHHH
Confidence            334455555565443 33 3444432  1 2222222 4468999999999999999999983     122223344456


Q ss_pred             HHhcc
Q 013297           98 QIFEK  102 (446)
Q Consensus        98 ~~LGl  102 (446)
                      +.||+
T Consensus       335 e~lg~  339 (399)
T PRK09052        335 RDLGL  339 (399)
T ss_pred             HHhCC
Confidence            77886

>PRK05656 acetyl-CoA acetyltransferase; Provisional

Probab=90.26  E-value=1.2  Score=45.97  Aligned_cols=86  Identities=14%  Similarity=0.065  Sum_probs=54.0

Q ss_pred             HHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhH
Q 013297          219 TCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDL  298 (446)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~  298 (446)
                      .+.+..+++.      +++++|||++-.|-.|.-......+.|                        |+..+.+      
T Consensus       295 ~a~~~al~~a------gl~~~dId~~e~~d~f~~~~~~~~e~l------------------------g~~~~~v------  338 (393)
T PRK05656        295 SATRRCLDKA------GWSLAELDLIEANEAFAAQSLAVGKEL------------------------GWDAAKV------  338 (393)
T ss_pred             HHHHHHHHHc------CCCHHHCCEEEecCccHHHHHHHHHHh------------------------CCCCccC------
Confidence            3555555665      899999999999998887666666555                        3332211      


Q ss_pred             HHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEecc
Q 013297          299 EKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGS  359 (446)
Q Consensus       299 ~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGs  359 (446)
                           |.           + --...+||...|+=..-+.+++.+ -+ ..|.|++|.+...
T Consensus       339 -----n~-----------~-Gg~~a~GHp~gAsG~~~~~~l~~~-l~-~~~~~~gl~~~c~  380 (393)
T PRK05656        339 -----NV-----------N-GGAIALGHPIGASGCRVLVTLLHE-MI-RRDAKKGLATLCI  380 (393)
T ss_pred             -----Cc-----------C-CCHHHhCccHHHHHHHHHHHHHHH-HH-HcCCCEEEEEEcc
Confidence                 11           0 011467999888877777777665 11 2466767776644

>PRK09050 beta-ketoadipyl CoA thiolase; Validated

Probab=89.90  E-value=2.5  Score=43.79  Aligned_cols=41  Identities=12%  Similarity=0.164  Sum_probs=30.0

Q ss_pred             HHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcc
Q 013297           57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK  102 (446)
Q Consensus        57 A~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl  102 (446)
                      ...|++++|+++|++++|||.+.+.     |......-...+.||+
T Consensus       299 ~~~a~~~al~~Agl~~~DId~~ei~-----D~f~~~~l~~~e~lg~  339 (401)
T PRK09050        299 PAPATRKLLARLGLTIDQFDVIELN-----EAFAAQGLAVLRQLGL  339 (401)
T ss_pred             HHHHHHHHHHHcCCCHHHCCccccC-----cHhHHHHHHHHHHcCC
Confidence            3579999999999999999999831     2222333455677887

>PRK09051 beta-ketothiolase; Provisional

Probab=89.40  E-value=2.7  Score=43.39  Aligned_cols=74  Identities=8%  Similarity=0.056  Sum_probs=44.4

Q ss_pred             ccHHHHHHhcCCCcc-eeEEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHH
Q 013297           19 VQQEALEAHDGASKG-KYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLM   97 (446)
Q Consensus        19 v~~~~l~~~~g~~~~-k~~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~   97 (446)
                      +..++.++.+|..+- |+ .|.+...  . .++.+. .-...|++++|+++|++++|||++.+.     +......-...
T Consensus       260 l~s~~~a~~~g~~~~~~I-~g~~~~~--~-~~~~~~-~~~~~a~~~al~~agi~~~did~~ei~-----d~f~~~~~~~~  329 (394)
T PRK09051        260 LAEADAAEARGLKPLARL-VGYAHAG--V-DPEYMG-IGPVPATQKALERAGLTVADLDVIEAN-----EAFAAQACAVT  329 (394)
T ss_pred             EecHHHHHHCCCCccEEE-EEEEEec--c-CCCccc-ccHHHHHHHHHHHcCCCHHHcCEEEec-----CccHHHHHHHH
Confidence            344455555565543 44 2444332  1 222222 233689999999999999999999872     22333444566


Q ss_pred             HHhcc
Q 013297           98 QIFEK  102 (446)
Q Consensus        98 ~~LGl  102 (446)
                      +.||+
T Consensus       330 e~lg~  334 (394)
T PRK09051        330 RELGL  334 (394)
T ss_pred             HHhCC
Confidence            78886

>PRK07661 acetyl-CoA acetyltransferase; Provisional

Probab=89.29  E-value=2.3  Score=43.92  Aligned_cols=126  Identities=14%  Similarity=0.156  Sum_probs=65.4

Q ss_pred             HHHHHHhcCCCcc-eeEEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHH
Q 013297           21 QEALEAHDGASKG-KYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQI   99 (446)
Q Consensus        21 ~~~l~~~~g~~~~-k~~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~   99 (446)
                      .++.++.+|..+- ++ .|.+...  . .+..... -...|++++|+++|++++|||.+.+.     |......-.-.+.
T Consensus       259 s~~~A~~~g~~~~~~i-~g~~~~~--~-~~~~~~~-~~~~a~~~al~~agl~~~did~~ei~-----d~f~~~~l~~~e~  328 (391)
T PRK07661        259 DREKAESDGLKPLAKF-RSFAVAG--V-PPEVMGI-GPIAAIPKALKLAGLELSDIGLFELN-----EAFASQSIQVIRE  328 (391)
T ss_pred             cHHHHHHCCCCceEEE-EEEEEec--C-CCcccch-HHHHHHHHHHHHcCCCHHHCCEEEeC-----CHHHHHHHHHHHH
Confidence            3445555555444 33 3444442  1 1222222 34689999999999999999999842     2222222333457


Q ss_pred             hcccC---CCCceeeeeC--CcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCccCCCCCCccccccceeeeecc
Q 013297          100 FEKFG---NTDIEGVDST--NACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGP  171 (446)
Q Consensus       100 LGl~g---~~~~~~~di~--~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~~~~~~~t~GdGAvA~Ll~~  171 (446)
                      ||+..   |++--..-.+  .+++|.-..+.++..+-+.   ++++.|+..+            ..|..+.|+||++
T Consensus       329 lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL~~~---~~~~g~~~~c------------~~gg~g~a~~~e~  390 (391)
T PRK07661        329 LGLDEEKVNVNGGAIALGHPLGCTGAKLTLSLIHEMKRR---NEQFGIVTMC------------IGGGMGAAGVFEL  390 (391)
T ss_pred             cCCCCCCCCCCCChHHhCCcHHHHHHHHHHHHHHHHHhc---CCCeEEEEEc------------cccChhhEEEEEe
Confidence            88611   1111111122  3555655555555555443   3466665432            2355556777653

>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2

Probab=89.19  E-value=2.8  Score=35.95  Aligned_cols=96  Identities=17%  Similarity=0.218  Sum_probs=56.0

Q ss_pred             HHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccC---CCCceeeeeC--CcChhHHHHHHHHHHH
Q 013297           56 MSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFG---NTDIEGVDST--NACYGGTAALFNCVNW  130 (446)
Q Consensus        56 lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g---~~~~~~~di~--~aC~gg~~AL~~A~~~  130 (446)
                      =.+.|++++|+++|++++|||.+.+.-.     .-...-...+.||+..   |++--.+-.+  .||+|....+..+..+
T Consensus        23 ~p~~A~~~al~~ag~~~~did~~Ei~Ea-----FA~~~l~~~~~lg~~~~~vN~~GG~la~GHP~gasG~r~~~~l~~~L   97 (123)
T PF02803_consen   23 GPVPAARKALERAGLTPDDIDVIEINEA-----FAAQVLAFLEALGLDPEKVNPNGGALALGHPLGASGARLVVELAHQL   97 (123)
T ss_dssp             THHHHHHHHHHHHT--GGGESEEEE--S-----BHHHHHHHHHHHTTGGGGBSTT--HHHH-BHTTTHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHhCCCccccchhhccch-----hhhHHHHhhccccccccccCcccccccccccccccccchhhhhHHHH
Confidence            3458999999999999999999987321     2234456677788610   1111122223  4777777777777766


Q ss_pred             HHcCCCCCCEEEEEEeecCccCCCCCCccccccceeeeecc
Q 013297          131 VESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGP  171 (446)
Q Consensus       131 l~sg~~~~~~aLVVasD~~~y~~~~~~~t~GdGAvA~Ll~~  171 (446)
                      -..+   +++.|+-.+            ..|..+.|+||++
T Consensus        98 ~~~~---~~~gla~~~------------~ggG~g~a~ller  123 (123)
T PF02803_consen   98 RRRG---GRYGLAAIC------------AGGGQGSAVLLER  123 (123)
T ss_dssp             HHHT---TSEEEEEEE------------ETTTEEEEEEEEE
T ss_pred             HHhc---hhhhhHHhc------------ccceeeEEEEEEC
Confidence            5544   366665432            2355566777753

3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....

>PRK06504 acetyl-CoA acetyltransferase; Provisional

Probab=88.38  E-value=3  Score=43.01  Aligned_cols=36  Identities=6%  Similarity=0.098  Sum_probs=28.6

Q ss_pred             HHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHh
Q 013297          220 CYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARL  261 (446)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l  261 (446)
                      +.+..+++.      +++++|||.+=+|-+|.-...-.++.|
T Consensus       293 a~~~a~~~a------gl~~~Did~~Ei~d~Fa~~~l~~~e~l  328 (390)
T PRK06504        293 ATERALKKA------GMKIDDIDLYEVNEAFASVPLAWLKAT  328 (390)
T ss_pred             HHHHHHHHc------CCCHHHCCEEEecccchHHHHHHHHHh
Confidence            445555554      899999999999999998877777766

>PRK12578 acetyl-CoA acetyltransferase; Provisional

Probab=88.15  E-value=4.3  Score=41.67  Aligned_cols=37  Identities=5%  Similarity=0.079  Sum_probs=30.1

Q ss_pred             HHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHh
Q 013297          219 TCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARL  261 (446)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l  261 (446)
                      .+.+..+++.      +++++|||++-.|-+|..+.-..++.|
T Consensus       261 ~a~~~al~~A------gi~~~DiD~~ei~d~ft~~~l~~le~l  297 (385)
T PRK12578        261 LAARQAYNMA------KVTPNDIEVATVHDAFTIAEIMGYEDL  297 (385)
T ss_pred             HHHHHHHHHc------CCCHHHCCEEEecCcChHHHHHHHHHc
Confidence            4555555654      899999999999999998888888777

>PRK06366 acetyl-CoA acetyltransferase; Provisional

Probab=87.38  E-value=3.5  Score=42.45  Aligned_cols=114  Identities=12%  Similarity=0.055  Sum_probs=65.8

Q ss_pred             ccHHHHHHhcCCCcc-eeEEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHH
Q 013297           19 VQQEALEAHDGASKG-KYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLM   97 (446)
Q Consensus        19 v~~~~l~~~~g~~~~-k~~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~   97 (446)
                      |..++.++..+..|- ++ .|.++...    +.++.....+.|++++++++|++++|||.+.+.     +......-.-.
T Consensus       253 l~See~A~~l~~~pv~~I-~g~~~~~~----~~~~~~~~~~~A~~~al~~Agl~~~DiDv~Ei~-----daFa~~~l~~l  322 (388)
T PRK06366        253 MASEKAINEYGLKPIARI-TGYESASL----DPLDFVEAPIPATRKLLEKQNKSIDYYDLVEHN-----EAFSIASIIVR  322 (388)
T ss_pred             EecHHHHHHcCCCcCEEE-EEEEEEec----CHHHhcccHHHHHHHHHHHcCCCHHHcceeecc-----chhHHHHHHHH
Confidence            444555665565554 44 34554431    123333445789999999999999999999862     22223344556


Q ss_pred             HHhcccCC---CCceeeeeC--CcChhHHHHHHHHHHHHHcCCCCCCEEEEEE
Q 013297           98 QIFEKFGN---TDIEGVDST--NACYGGTAALFNCVNWVESSSWDGRYGLVVC  145 (446)
Q Consensus        98 ~~LGl~g~---~~~~~~di~--~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVa  145 (446)
                      +.||+.|.   ++--.+-.+  .||+|....+.++..+-..|   +++.|+-.
T Consensus       323 e~lgl~g~~vN~~GG~la~GHP~GatG~~~~~~l~~qL~~~~---~~~g~~~~  372 (388)
T PRK06366        323 DQLKIDNERFNVNGGAVAIGHPIGNSGSRIIVTLINALKTRH---MKTGLATL  372 (388)
T ss_pred             HHhCCCCCccCCCCchhhhCCCcCCCHHHHHHHHHHHHHhcC---CCeEEEEE
Confidence            67776221   111122223  47777777777776665433   36666543

>PRK08235 acetyl-CoA acetyltransferase; Provisional

Probab=87.14  E-value=3  Score=43.05  Aligned_cols=37  Identities=14%  Similarity=0.155  Sum_probs=28.4

Q ss_pred             HHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHh
Q 013297          219 TCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARL  261 (446)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l  261 (446)
                      .+.+..+++.      +++++|||++-.|-+|........+.|
T Consensus       295 ~a~~~al~~a------gl~~~did~~e~~d~f~~~~l~~~e~l  331 (393)
T PRK08235        295 YAINALLEKT------GKTVEDIDLFEINEAFAAVALASTEIA  331 (393)
T ss_pred             HHHHHHHHHh------CCCHHHCCeehhcchhHHHHHHHHHHh
Confidence            3555555665      899999999999999987776666666

>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed

Probab=86.79  E-value=4.4  Score=42.36  Aligned_cols=36  Identities=6%  Similarity=0.123  Sum_probs=27.6

Q ss_pred             HHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHh
Q 013297          220 CYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARL  261 (446)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l  261 (446)
                      +.+..+++.      +++++|||.+-.|-+|.-+.-..++.|
T Consensus       314 a~~~al~~A------Gl~~~DiD~~Ei~d~Fa~~~l~~~e~l  349 (428)
T PRK08963        314 ATPLALERA------GLTLADLTLIDMHEAFAAQTLANLQMF  349 (428)
T ss_pred             HHHHHHHHc------CCCHHHCCEEEEccccHHHHHHHHHHh
Confidence            445555554      899999999999999997766666655

>PRK07516 acetyl-CoA acetyltransferase; Provisional

Probab=86.62  E-value=5.5  Score=40.99  Aligned_cols=37  Identities=5%  Similarity=0.152  Sum_probs=29.6

Q ss_pred             HHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHh
Q 013297          219 TCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARL  261 (446)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l  261 (446)
                      .+.+..+++.      +++++|||.+-.|-+|..+..-..+.|
T Consensus       264 ~a~~~a~~~a------gl~~~did~~e~~d~f~~~~~~~~e~l  300 (389)
T PRK07516        264 RAWQRALAQA------GVTLDDLSFVETHDCFTIAELIEYEAM  300 (389)
T ss_pred             HHHHHHHHHc------CCCHHHCCEEEEecCCCHHHHHHHHHc
Confidence            4555555655      799999999999999999877777777

>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=86.20  E-value=2.6  Score=41.88  Aligned_cols=79  Identities=16%  Similarity=0.014  Sum_probs=50.6

Q ss_pred             HHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeee---CC-cChhHHHHHHHHHHHHH
Q 013297           57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDS---TN-ACYGGTAALFNCVNWVE  132 (446)
Q Consensus        57 A~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di---~~-aC~gg~~AL~~A~~~l~  132 (446)
                      ..++.+++|+++|++++|||.+++..-     .+.+-..+++.||+  +..-....+   +| +|++...+|   ..+++
T Consensus       227 ~~~~i~~~L~~~g~~~~did~~~~h~~-----~~~~~~~~~~~lg~--~~~~~~~~~~~~Gn~~sas~~~~L---~~~~~  296 (325)
T PRK12879        227 MPKGARQVLEKAGLTKDDIDWVIPHQA-----NLRIIESLCEKLGI--PMEKTLVSVEYYGNTSAATIPLAL---DLALE  296 (325)
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHHHHcCC--CHHHhhhhHhhhCchHHHHHHHHH---HHHHH
Confidence            346788999999999999999987542     34455678999997  332211122   22 333333444   34456


Q ss_pred             cCC-CCCCEEEEEE
Q 013297          133 SSS-WDGRYGLVVC  145 (446)
Q Consensus       133 sg~-~~~~~aLVVa  145 (446)
                      .|. .+|+++|+++
T Consensus       297 ~g~~~~Gd~vll~~  310 (325)
T PRK12879        297 QGKIKPGDTLLLYG  310 (325)
T ss_pred             cCCCCCCCEEEEEE
Confidence            653 2678898887

>PRK05790 putative acyltransferase; Provisional

Probab=85.97  E-value=7  Score=40.24  Aligned_cols=73  Identities=12%  Similarity=0.045  Sum_probs=41.9

Q ss_pred             cHHHHHHhcCCCcc-eeEEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHH
Q 013297           20 QQEALEAHDGASKG-KYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQ   98 (446)
Q Consensus        20 ~~~~l~~~~g~~~~-k~~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~   98 (446)
                      ..++.++.++..+- ++ .|.+...  . .+..... -...|++++++++|++++|||.+.+.     |......-...+
T Consensus       260 ~s~e~a~~~~~~~~~~I-~g~~~~~--~-~~~~~~~-~~~~a~~~a~~~Agi~~~did~~e~~-----d~f~~~~l~~~e  329 (393)
T PRK05790        260 MSEAKAKELGLTPLARI-VSYAVAG--V-DPAIMGI-GPVPAIRKALEKAGWSLADLDLIEIN-----EAFAAQALAVEK  329 (393)
T ss_pred             ecHHHHHHCCCCeeEEE-EEEEEcc--C-CCCccch-hHHHHHHHHHHHcCCCHHHCCEEEeC-----cHHHHHHHHHHH
Confidence            33444454454443 33 3555442  1 2222222 24579999999999999999999752     212223334566


Q ss_pred             Hhcc
Q 013297           99 IFEK  102 (446)
Q Consensus        99 ~LGl  102 (446)
                      .||+
T Consensus       330 ~lg~  333 (393)
T PRK05790        330 ELGL  333 (393)
T ss_pred             HhCC
Confidence            7775

>PRK07851 acetyl-CoA acetyltransferase; Provisional

Probab=85.77  E-value=3.5  Score=42.76  Aligned_cols=37  Identities=16%  Similarity=0.173  Sum_probs=27.7

Q ss_pred             HHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHh
Q 013297          219 TCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARL  261 (446)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l  261 (446)
                      .+.+..+++.      +++++|||++=.|-+|.-..-..++.|
T Consensus       307 ~a~~~al~~A------gi~~~did~~ei~d~f~~~~l~~le~l  343 (406)
T PRK07851        307 EASKQALARA------GMSIDDIDLVEINEAFAAQVLPSAREL  343 (406)
T ss_pred             HHHHHHHHHh------CCCHHHCCeehhhhHHHHHHHHHHHHh
Confidence            4555555665      799999999999998887666666666

>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=85.71  E-value=2.7  Score=42.00  Aligned_cols=81  Identities=6%  Similarity=-0.032  Sum_probs=49.8

Q ss_pred             HHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeC--CcChhHHHHHHHHHHHHHcC
Q 013297           57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST--NACYGGTAALFNCVNWVESS  134 (446)
Q Consensus        57 A~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~--~aC~gg~~AL~~A~~~l~sg  134 (446)
                      ...+.+++|+++|++++|||.+++...+.     ..-..+++.||+  +++.....+.  ..|++...-+.+ ..++++|
T Consensus       232 ~~~~i~~~L~~~gl~~~did~~~~H~~~~-----~~~~~i~~~l~l--~~e~~~~~~~~~Gn~~sas~~~~L-~~~~~~g  303 (329)
T PRK07204        232 LMKFIDKLLMDAGYTLADIDLIVPHQASG-----PAMRLIRKKLGV--DEERFVTIFEDHGNMIAASIPVAL-FEAIKQK  303 (329)
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEeCCCCH-----HHHHHHHHHcCC--CHHHhhhhHhhhCcHHHHHHHHHH-HHHHHcC
Confidence            44778899999999999999998644322     345578999998  3332222222  223333222222 2345665


Q ss_pred             C-CCCCEEEEEE
Q 013297          135 S-WDGRYGLVVC  145 (446)
Q Consensus       135 ~-~~~~~aLVVa  145 (446)
                      . .+|+++|+++
T Consensus       304 ~~~~Gd~vll~~  315 (329)
T PRK07204        304 KVQRGNKILLLG  315 (329)
T ss_pred             CCCCCCEEEEEE
Confidence            3 3778888876

>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=85.16  E-value=3.7  Score=41.13  Aligned_cols=84  Identities=6%  Similarity=-0.006  Sum_probs=51.8

Q ss_pred             HHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeC--CcChhHHHHHHHHHHHH
Q 013297           54 ISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST--NACYGGTAALFNCVNWV  131 (446)
Q Consensus        54 ~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~--~aC~gg~~AL~~A~~~l  131 (446)
                      .....++.+++|+++|++++|||.+++...     .+..-..+.+.||+  +..-....+.  ..|++...-+.++ .++
T Consensus       238 ~~~~~~~~~~~L~~~g~~~~did~~i~H~~-----~~~~~~~~~~~lgl--~~~k~~~~~~~~GN~~sas~~~~L~-~~~  309 (338)
T PRK09258        238 VELAVDTWEAFLAQLGWAVEQVDRVICHQV-----GAAHTRAILKALGI--DPEKVFTTFPTLGNMGPASLPITLA-MAA  309 (338)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCCEEecCCC-----CHHHHHHHHHHhCC--CHHHceehHhhhCCcHHhHHHHHHH-HHH
Confidence            345556888999999999999999987542     33455678899998  3322222222  3333333333332 234


Q ss_pred             HcCC-CCCCEEEEEE
Q 013297          132 ESSS-WDGRYGLVVC  145 (446)
Q Consensus       132 ~sg~-~~~~~aLVVa  145 (446)
                      +.|. .+|+++|+++
T Consensus       310 ~~g~~~~Gd~vll~~  324 (338)
T PRK09258        310 EEGFLKPGDRVALLG  324 (338)
T ss_pred             HhCCCCCCCEEEEEE
Confidence            5543 2778888887

>PRK06690 acetyl-CoA acetyltransferase; Provisional

Probab=84.86  E-value=9.4  Score=38.97  Aligned_cols=95  Identities=14%  Similarity=0.165  Sum_probs=56.3

Q ss_pred             HHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCce-------eeeeCCcChhHHHHHHHH
Q 013297           55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIE-------GVDSTNACYGGTAALFNC  127 (446)
Q Consensus        55 ~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~-------~~di~~aC~gg~~AL~~A  127 (446)
                      .-...|++++|+++|++++|||.+.+.     +......-...+.||+  ...-.       ++--..|++|........
T Consensus       258 ~~~~~a~~~al~~Agl~~~Did~~ei~-----eafa~~~~~~~e~lgl--~~~~vn~~GG~la~Ghp~GatG~~~~~~~~  330 (361)
T PRK06690        258 TGPIFAVNKLLNEMNMKVEDIDYFEIN-----EAFASKVVACAKELQI--PYEKLNVNGGAIALGHPYGASGAMLVTRLF  330 (361)
T ss_pred             hHHHHHHHHHHHHcCCCHHHcCEeeec-----chhHHHHHHHHHhcCC--CchhcccCCcHHhccCchhhhHHHHHHHHH
Confidence            345679999999999999999999762     2223344456677886  21100       111124666666666666


Q ss_pred             HHHHHcCCCCCCEEEEEEeecCccCCCCCCccccccceeeeecc
Q 013297          128 VNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGP  171 (446)
Q Consensus       128 ~~~l~sg~~~~~~aLVVasD~~~y~~~~~~~t~GdGAvA~Ll~~  171 (446)
                      ..+-+.+   +++.++..+            ..|-.++|+||++
T Consensus       331 ~ql~~~~---~~~g~~~~c------------~~gG~g~a~~~e~  359 (361)
T PRK06690        331 YQAKRED---MKYGIATLG------------IGGGIGLALLFEK  359 (361)
T ss_pred             HHHHHhC---CCEEEEEEc------------ccCcceeEEEEEe
Confidence            5554433   366655431            2344466777764

>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional

Probab=84.82  E-value=2.9  Score=41.74  Aligned_cols=79  Identities=9%  Similarity=0.021  Sum_probs=49.7

Q ss_pred             HHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeC-C---cChhHHHHHHHHHHHHH
Q 013297           57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST-N---ACYGGTAALFNCVNWVE  132 (446)
Q Consensus        57 A~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~-~---aC~gg~~AL~~A~~~l~  132 (446)
                      ...+.+++|+++|++++|||.+++....     +.+-..+.+.||+  +++-....+. .   +|++...+|.   ..++
T Consensus       228 ~~~~i~~~L~~~g~~~~did~~~~hq~~-----~~~~~~~~~~lgl--~~~k~~~~l~~~Gn~~sasi~~~L~---~~~~  297 (326)
T CHL00203        228 VPAVIIKCLNALNISIDEVDWFILHQAN-----KRILEAIANRLSV--PNSKMITNLEKYGNTSAASIPLALD---EAIQ  297 (326)
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEECCCC-----HHHHHHHHHHhCC--CHHHhhhHHHhhCcHHHHHHHHHHH---HHHH
Confidence            4556899999999999999999874433     3445568999998  3222222232 2   3333333333   3345


Q ss_pred             cCC-CCCCEEEEEE
Q 013297          133 SSS-WDGRYGLVVC  145 (446)
Q Consensus       133 sg~-~~~~~aLVVa  145 (446)
                      .|. .||+++|+++
T Consensus       298 ~g~~~~Gd~vll~~  311 (326)
T CHL00203        298 NNKIQPGQIIVLSG  311 (326)
T ss_pred             hCCCCCCCEEEEEE
Confidence            554 3788888887

>PRK04262 hypothetical protein; Provisional

Probab=84.40  E-value=2.6  Score=42.63  Aligned_cols=82  Identities=15%  Similarity=0.166  Sum_probs=52.4

Q ss_pred             HHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCC-Cce-ee---eeCC-cChhHHHHHHH
Q 013297           53 VISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNT-DIE-GV---DSTN-ACYGGTAALFN  126 (446)
Q Consensus        53 ~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~-~~~-~~---di~~-aC~gg~~AL~~  126 (446)
                      ......++.+++|+++|++++|||.+++...     .+.+-..+++.||+  .. +.. .+   +++| ++++-..+|..
T Consensus       207 ~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~-----n~~~~~~~~~~Lgl--~~ek~~~~~~~~~~GNt~sAsi~~~L~~  279 (347)
T PRK04262        207 YFKHIISAAKGLMEKLGLKPSDYDYAVFHQP-----NGKFPLRVAKMLGF--TKEQVKPGLLTPYIGNTYSGSALLGLAA  279 (347)
T ss_pred             HHHHHHHHHHHHHHHhCcCHHHhceeecCCC-----chHHHHHHHHHcCC--CHHHhhccchhhhhCChHHHHHHHHHHH
Confidence            3356778899999999999999999987522     22344567888997  32 222 11   3332 44555555555


Q ss_pred             HHHHHHcCCCCCCEEEEEE
Q 013297          127 CVNWVESSSWDGRYGLVVC  145 (446)
Q Consensus       127 A~~~l~sg~~~~~~aLVVa  145 (446)
                      +..  +..  +|+++|+++
T Consensus       280 ~~~--~~~--~Gd~vll~~  294 (347)
T PRK04262        280 VLD--VAK--PGDRILVVS  294 (347)
T ss_pred             HHH--hCC--CCCEEEEEe
Confidence            443  222  778888887

>PRK08257 acetyl-CoA acetyltransferase; Validated

Probab=83.77  E-value=5.6  Score=42.45  Aligned_cols=37  Identities=16%  Similarity=0.123  Sum_probs=30.3

Q ss_pred             HHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHh
Q 013297          219 TCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARL  261 (446)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l  261 (446)
                      .+.+...++.      |++++|||.+=+|..|+-.....++.|
T Consensus       296 ~aa~~a~~~A------Gi~~~Did~~elydcF~~~~~~~~E~L  332 (498)
T PRK08257        296 AAGRRALALA------GLGIDDIDAFDLYSCFPSAVQVAAREL  332 (498)
T ss_pred             HHHHHHHHHh------CCCHHHCCEEEeccCCHHHHHHHHHHc
Confidence            3555555665      899999999999999999888888877

>PRK07108 acetyl-CoA acetyltransferase; Provisional

Probab=83.69  E-value=4.2  Score=41.99  Aligned_cols=24  Identities=25%  Similarity=0.256  Sum_probs=21.9

Q ss_pred             HHHHHHHHHHHHCCCCcCCccEEE
Q 013297           56 MSLTAVTNLLEKYKIDPKQIGRLE   79 (446)
Q Consensus        56 lA~~Aa~~aL~~agi~~~dId~li   79 (446)
                      -...|++++|+++|++++|||.+.
T Consensus       291 ~~~~a~~~al~~agl~~~Did~~e  314 (392)
T PRK07108        291 GPVFAVPKLLKQAGLKVDDIDLWE  314 (392)
T ss_pred             hHHHHHHHHHHHcCCCHHHcCchH
Confidence            347899999999999999999997

>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=83.64  E-value=6.2  Score=40.43  Aligned_cols=85  Identities=13%  Similarity=0.133  Sum_probs=54.5

Q ss_pred             HHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHh-----cccCCC-Cce-ee-eeC-CcChhHHHHHH
Q 013297           55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIF-----EKFGNT-DIE-GV-DST-NACYGGTAALF  125 (446)
Q Consensus        55 ~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~L-----Gl~g~~-~~~-~~-di~-~aC~gg~~AL~  125 (446)
                      ....++.+++|+++|++++|||.++....     .+.+-..+.++|     |+  .+ ++. .+ +++ .+|++...+|.
T Consensus       272 ~~~~~~i~~~L~~~gl~~~DId~~v~Hq~-----n~~~~~~v~~~l~~~~~gl--~~~k~~~~~~~~GNt~sAsipi~L~  344 (378)
T PRK06816        272 VYTIKPLLELVDKRNLDPDDIDYFLPHYS-----SEYFREKIVELLAKAGFMI--PEEKWFTNLATVGNTGSASIYIMLD  344 (378)
T ss_pred             HHHHHHHHHHHHHcCCChhhCCEEeeCcc-----cHHHHHHHHHHHHhccCCC--ChhheEEeccccccccchHHHHHHH
Confidence            34577889999999999999999986433     233445667766     66  22 222 12 223 36666666665


Q ss_pred             HHHHHHHcCC-CCCCEEEEEEeecC
Q 013297          126 NCVNWVESSS-WDGRYGLVVCTDSA  149 (446)
Q Consensus       126 ~A~~~l~sg~-~~~~~aLVVasD~~  149 (446)
                      .+   ++.|. .||+++++++.+..
T Consensus       345 ~a---~~~g~~~~Gd~vl~~~~~s~  366 (378)
T PRK06816        345 EL---LNSGRLKPGQKILCFVPESG  366 (378)
T ss_pred             HH---HHcCCCCCCCEEEEEEeccc
Confidence            54   44443 37889998877654

>PRK06840 hypothetical protein; Validated

Probab=83.39  E-value=4.7  Score=40.42  Aligned_cols=80  Identities=18%  Similarity=0.131  Sum_probs=49.8

Q ss_pred             HHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCC-Cceee-eeCC-cChhHHHHHHHHHHHHH
Q 013297           56 MSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNT-DIEGV-DSTN-ACYGGTAALFNCVNWVE  132 (446)
Q Consensus        56 lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~-~~~~~-di~~-aC~gg~~AL~~A~~~l~  132 (446)
                      ...++.+++|+++|++++|||.++....     .+.+-..+++.||+  .+ +...+ +++| ++++...+|   ..+++
T Consensus       238 ~~~~~i~~~L~~~gl~~~did~~~~h~~-----~~~~~~~~~~~Lgl--~~~~~~~~~~~Gn~~sas~~~~L---~~~~~  307 (339)
T PRK06840        238 NFLKVIREALRKSGYTPKDIDYLAILHM-----KRSAHIALLEGLGL--TEEQAIYLDEYGHLGQLDQILSL---HLALE  307 (339)
T ss_pred             HHHHHHHHHHHHcCCCHHHCCEEEECCc-----CHHHHHHHHHHcCC--CHHHeEeHHhccchhhhhHHHHH---HHHHH
Confidence            3457899999999999999999876332     23344568899998  32 22211 2222 333333333   34456


Q ss_pred             cCC-CCCCEEEEEE
Q 013297          133 SSS-WDGRYGLVVC  145 (446)
Q Consensus       133 sg~-~~~~~aLVVa  145 (446)
                      ++. .+|+++|+++
T Consensus       308 ~~~~~~Gd~ill~~  321 (339)
T PRK06840        308 QGKLKDGDLVVLVS  321 (339)
T ss_pred             cCCCCCCCEEEEEE
Confidence            653 2788888887

>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=83.22  E-value=3.7  Score=40.87  Aligned_cols=85  Identities=14%  Similarity=0.064  Sum_probs=51.2

Q ss_pred             HHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeC--CcChhHHHHHHHHHHHH
Q 013297           54 ISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST--NACYGGTAALFNCVNWV  131 (446)
Q Consensus        54 ~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~--~aC~gg~~AL~~A~~~l  131 (446)
                      .....++.+++|+++|++++|||.+++...     .+.+-..+.+.||+  ++.-....+.  ..|++...-+.+ ..++
T Consensus       226 ~~~~~~~~~~~L~~~gl~~~did~~~~h~~-----~~~~~~~~~~~l~l--~~~k~~~~l~~~Gn~~sas~~~~L-~~~~  297 (326)
T PRK05963        226 VRMMSGASQNVLASAAMTPQDIDRFFPHQA-----NARIVDKVCETIGI--PRAKAASTLETYGNSSAATIPLSL-SLAN  297 (326)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCCEEEeCCC-----CHHHHHHHHHHcCC--CHHHhhhhHHhhCcHHHHHHHHHH-HHHH
Confidence            444567888999999999999999987332     23455668889997  3332222222  233333322222 2334


Q ss_pred             HcCC-CCCCEEEEEEe
Q 013297          132 ESSS-WDGRYGLVVCT  146 (446)
Q Consensus       132 ~sg~-~~~~~aLVVas  146 (446)
                      +.+. .+|+++|+++.
T Consensus       298 ~~~~~~~Gd~vll~~~  313 (326)
T PRK05963        298 LEQPLREGERLLFAAA  313 (326)
T ss_pred             HhCCCCCCCEEEEEEE
Confidence            4443 37789998873

>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2

Probab=82.97  E-value=3.1  Score=35.05  Aligned_cols=38  Identities=21%  Similarity=0.150  Sum_probs=24.1

Q ss_pred             HHHHHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHH
Q 013297          216 ALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFA  259 (446)
Q Consensus       216 ~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~  259 (446)
                      .+.+++++.+++.      +++++|||++..|....+..+..-.
T Consensus        26 ~~~~~i~~al~~a------gi~~~~I~~i~~hg~Gt~~~D~~E~   63 (119)
T PF02801_consen   26 ALARAIRRALADA------GISPEDIDYIEAHGTGTPLGDAAEA   63 (119)
T ss_dssp             HHHHHHHHHHHHH------TS-GGGEEEEE----SSHHHHHHHH
T ss_pred             HHHHHHHHHHhhh------ccccccceeeeeeccccccchhhhh
Confidence            3345566666665      7999999999999999988776543

3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....

>PRK06289 acetyl-CoA acetyltransferase; Provisional

Probab=82.79  E-value=8.2  Score=39.93  Aligned_cols=37  Identities=11%  Similarity=0.087  Sum_probs=30.2

Q ss_pred             HHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHh
Q 013297          219 TCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARL  261 (446)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l  261 (446)
                      .+.+...++.      +++++|||.+-+|-+|..+.-..++.|
T Consensus       280 ~aa~~a~~~A------gi~~~Didv~el~D~fa~~~l~~le~l  316 (403)
T PRK06289        280 QAVLDAYRRA------GVGLDDLDGFEVHDCFTPSEYLAIDHI  316 (403)
T ss_pred             HHHHHHHHHc------CCCHHHCeEEeeeccchHHHHHHHHHc
Confidence            3555555665      899999999999999999888888877

>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III

Probab=81.72  E-value=6.3  Score=40.40  Aligned_cols=79  Identities=15%  Similarity=0.038  Sum_probs=49.7

Q ss_pred             HHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeC---C-cChhHHHHHHHHHHHHH
Q 013297           57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST---N-ACYGGTAALFNCVNWVE  132 (446)
Q Consensus        57 A~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~---~-aC~gg~~AL~~A~~~l~  132 (446)
                      ...+++++|+++|++++|||.+++...     .+.+-..+++.||+  .++-....+.   | ++++...+|..   +++
T Consensus       282 ~~~~i~~~L~~~gl~~~dId~~v~Hq~-----n~~~~~~~~~~Lgl--~~ek~~~~l~~~GNt~sAsi~~~L~~---~~~  351 (379)
T PLN02326        282 VPQVIESALQKAGLTAESIDWLLLHQA-----NQRIIDAVAQRLGI--PPEKVISNLANYGNTSAASIPLALDE---AVR  351 (379)
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHHHHcCC--CHHHeeecHhhcCcHHHHHHHHHHHH---HHH
Confidence            445778899999999999999986443     23344568999998  4332222332   2 33344444443   345


Q ss_pred             cCCC-CCCEEEEEE
Q 013297          133 SSSW-DGRYGLVVC  145 (446)
Q Consensus       133 sg~~-~~~~aLVVa  145 (446)
                      .+.. ||+++|+++
T Consensus       352 ~g~~~~Gd~vll~~  365 (379)
T PLN02326        352 SGKVKKGDVIATAG  365 (379)
T ss_pred             cCCCCCCCEEEEEE
Confidence            5532 778898887

>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2

Probab=80.99  E-value=1.9  Score=36.37  Aligned_cols=77  Identities=16%  Similarity=0.219  Sum_probs=47.4

Q ss_pred             HHHHHHHHHHCCCCcCCccEEEE-EeccCCCCCccHHHHHHHHhcccC-CCCceeeeeC-----CcChhHHHHHHHHHHH
Q 013297           58 LTAVTNLLEKYKIDPKQIGRLEV-GSETVIDKSKSIKTFLMQIFEKFG-NTDIEGVDST-----NACYGGTAALFNCVNW  130 (446)
Q Consensus        58 ~~Aa~~aL~~agi~~~dId~li~-~T~t~~~~~ps~a~~l~~~LGl~g-~~~~~~~di~-----~aC~gg~~AL~~A~~~  130 (446)
                      .++.+++|+++++++++||.|.. +|.++.. .+.-+..+.+.++-.. ...+..-.++     ....+|+..|..+.-.
T Consensus        28 ~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~-D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~~~l~  106 (119)
T PF02801_consen   28 ARAIRRALADAGISPEDIDYIEAHGTGTPLG-DAAEAEAIARVFGDSARQQPVPVGSVKSNIGHTEAASGLLSLAKALLA  106 (119)
T ss_dssp             HHHHHHHHHHHTS-GGGEEEEE----SSHHH-HHHHHHHHHHHHGGGGGTSTSEEE-THHHH-B-GGGHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhhccccccceeeeeeccccccc-hhhhhhhhhhhhcccccccccceeccccccccccccchHHHHHHHHHH
Confidence            67899999999999999999985 4444421 2345667788887411 0124443333     2556777777777777


Q ss_pred             HHcCC
Q 013297          131 VESSS  135 (446)
Q Consensus       131 l~sg~  135 (446)
                      ++.+.
T Consensus       107 l~~~~  111 (119)
T PF02801_consen  107 LEHGT  111 (119)
T ss_dssp             HHHTE
T ss_pred             HhcCC
Confidence            77664

3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....

>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction

Probab=80.37  E-value=8.3  Score=38.17  Aligned_cols=77  Identities=12%  Similarity=-0.081  Sum_probs=45.1

Q ss_pred             HHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCcee----eeeC-CcChhHHHHHHHHHH
Q 013297           55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEG----VDST-NACYGGTAALFNCVN  129 (446)
Q Consensus        55 ~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~----~di~-~aC~gg~~AL~~A~~  129 (446)
                      .....+++++|+++|++++|||.++..........+-....+...++.   .....    -.++ .+++++...|..+..
T Consensus       205 ~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~---~~~~~~~~~~~~G~~~aas~~~~l~~~~~  281 (332)
T cd00825         205 EGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGD---KSPAVSATKAMTGNLSSAAVVLAVDEAVL  281 (332)
T ss_pred             HHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCC---CCceeECCCcccccchhHhHHHHHHHHHH
Confidence            445578999999999999999999875544333222222333333431   11121    2333 355666666666666


Q ss_pred             HHHcC
Q 013297          130 WVESS  134 (446)
Q Consensus       130 ~l~sg  134 (446)
                      .++.+
T Consensus       282 ~~~~~  286 (332)
T cd00825         282 MLEHG  286 (332)
T ss_pred             HHhcC
Confidence            66655

Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	446
2f82_A	450	Hmg-Coa Synthase From Brassica Juncea In The Apo-Fo		0.0
2fa3_A	450	Hmg-Coa Synthase From Brassica Juncea In Complex Wi		0.0
2p8u_A	478	Crystal Structure Of Human 3-Hydroxy-3-Methylglutar		1e-115
2wya_A	460	Crystal Structure Of Human Mitochondrial 3-Hydroxy-		1e-112
1x9e_A	383	Crystal Structure Of Hmg-Coa Synthase From Enteroco		2e-25
3v4x_A	388	The Biochemical And Structural Basis For Inhibition		2e-25
2hdb_A	383	Hmg-coa Synthase From Enterococcus Faecalis. Mutati		5e-25
1ysl_A	402	Crystal Structure Of Hmg-Coa Synthase From Enteroco		2e-24
3v4n_A	388	The Biochemical And Structural Basis For Inhibition		4e-24
1ysl_B	384	Crystal Structure Of Hmg-Coa Synthase From Enteroco		4e-24
1xpk_C	388	Crystal Structure Of Staphylococcus Aureus Hmg-Coa		3e-20
1xpl_B	390	Crystal Structure Of Staphylococcus Aureus Hmg-coa		4e-19
1xpk_D	388	Crystal Structure Of Staphylococcus Aureus Hmg-Coa		4e-19
1xpk_B	388	Crystal Structure Of Staphylococcus Aureus Hmg-Coa		5e-19
1tvz_A	388	Crystal Structure Of 3-hydroxy-3-methylglutaryl-coe		6e-19
3leh_A	425	The Crystal Structure Of Smu.943c From Streptococcu		7e-18
3sqz_A	389	Crystal Structure Of Hmg_coa Synthase Complexed Wit		6e-17

>pdb|2F82|A Chain A, Hmg-Coa Synthase From Brassica Juncea In The Apo-Form Length = 450

Iteration: 1
 Score =  711 bits (1834), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/396 (83%), Positives = 365/396 (92%)
Query: 2   AKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAV 61
           AKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQ+C+AFC+E+EDVISMS  AV
Sbjct: 1   AKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQDCLAFCTELEDVISMSFNAV 60
Query: 62  TNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGT 121
           T+LLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQ+FEK GNTD+EGVDSTNACYGGT
Sbjct: 61  TSLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEGVDSTNACYGGT 120
Query: 122 AALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKL 181
           AAL NCVNWVES+SWDGRYGLV+CTDSAVYAEGPARPTGGAAA+ ML+GPDAP+ FESKL
Sbjct: 121 AALLNCVNWVESNSWDGRYGLVICTDSAVYAEGPARPTGGAAAIAMLIGPDAPIVFESKL 180
Query: 182 RGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNA 241
           RGSHM+H YDFYKPNLASEYPVVDGKLSQTCYLMALD+CYK LC+K+EKLEGK+FS+++A
Sbjct: 181 RGSHMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKLEGKEFSINDA 240
Query: 242 DYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKV 301
           DYFVFHSPYNKLVQKSFARLL+NDF+RNASS+DEAAKEK  P+S+LS DESYQSRDLEKV
Sbjct: 241 DYFVFHSPYNKLVQKSFARLLYNDFLRNASSIDEAAKEKFTPYSSLSLDESYQSRDLEKV 300
Query: 302 SQQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXXIHNKHSELDGKRVVLFSYGSGL 361
           SQQLAK  YDAKVQP+TL+PKQVGNMYT          +HNKHS+L GKRVV+FSYGSG 
Sbjct: 301 SQQLAKTYYDAKVQPTTLVPKQVGNMYTASLYAAFASLVHNKHSDLAGKRVVMFSYGSGS 360
Query: 362 TATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHE 397
           TATMFSL+L E   PFSLSNI SVM+V GKLK+RHE
Sbjct: 361 TATMFSLRLCENQSPFSLSNIASVMDVGGKLKARHE 396

>pdb|2FA3|A Chain A, Hmg-Coa Synthase From Brassica Juncea In Complex With Acetyl-Coa And Acetyl-Cys117 Length = 450

Iteration: 1
 Score =  707 bits (1824), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/396 (83%), Positives = 364/396 (91%)
Query: 2   AKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAV 61
           AKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQ+C+AFC+E+EDVISMS  AV
Sbjct: 1   AKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQDCLAFCTELEDVISMSFNAV 60
Query: 62  TNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGT 121
           T+LLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQ+FEK GNTD+EGVDSTNA YGGT
Sbjct: 61  TSLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEGVDSTNAXYGGT 120
Query: 122 AALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKL 181
           AAL NCVNWVES+SWDGRYGLV+CTDSAVYAEGPARPTGGAAA+ ML+GPDAP+ FESKL
Sbjct: 121 AALLNCVNWVESNSWDGRYGLVICTDSAVYAEGPARPTGGAAAIAMLIGPDAPIVFESKL 180
Query: 182 RGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNA 241
           RGSHM+H YDFYKPNLASEYPVVDGKLSQTCYLMALD+CYK LC+K+EKLEGK+FS+++A
Sbjct: 181 RGSHMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKLEGKEFSINDA 240
Query: 242 DYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKV 301
           DYFVFHSPYNKLVQKSFARLL+NDF+RNASS+DEAAKEK  P+S+LS DESYQSRDLEKV
Sbjct: 241 DYFVFHSPYNKLVQKSFARLLYNDFLRNASSIDEAAKEKFTPYSSLSLDESYQSRDLEKV 300
Query: 302 SQQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXXIHNKHSELDGKRVVLFSYGSGL 361
           SQQLAK  YDAKVQP+TL+PKQVGNMYT          +HNKHS+L GKRVV+FSYGSG 
Sbjct: 301 SQQLAKTYYDAKVQPTTLVPKQVGNMYTASLYAAFASLVHNKHSDLAGKRVVMFSYGSGS 360
Query: 362 TATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHE 397
           TATMFSL+L E   PFSLSNI SVM+V GKLK+RHE
Sbjct: 361 TATMFSLRLCENQSPFSLSNIASVMDVGGKLKARHE 396

>pdb|2P8U|A Chain A, Crystal Structure Of Human 3-Hydroxy-3-Methylglutaryl Coa Synthase I Length = 478

Iteration: 1
 Score =  410 bits (1054), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 206/403 (51%), Positives = 272/403 (67%), Gaps = 8/403 (1%)
Query: 4   NVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTN 63
           +VGI+A++IYFP   V Q  LE +DG   GKYTIGLGQ  M FC++ ED+ S+ +T V N
Sbjct: 24  DVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQAKMGFCTDREDINSLCMTVVQN 83
Query: 64  LLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAA 123
           L+E+  +    IGRLEVG+ET+IDKSKS+KT LMQ+FE+ GNTDIEG+D+TNA YGGTAA
Sbjct: 84  LMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGIDTTNAXYGGTAA 143
Query: 124 LFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRG 183
           +FN VNW+ESSSWDGRY LVV  D AVYA G ARPTGG  AV +L+GP+AP+ FE  LRG
Sbjct: 144 VFNAVNWIESSSWDGRYALVVAGDIAVYATGNARPTGGVGAVALLIGPNAPLIFERGLRG 203
Query: 184 SHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYE---KLEG--KQFSL 238
           +HM HAYDFYKP++ SEYP+VDGKLS  CYL ALD CY   C K     + EG  K F+L
Sbjct: 204 THMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYCKKIHAQWQKEGNDKDFTL 263
Query: 239 SNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDL 298
           ++  + +FHSPY KLVQKS AR+L NDF+ + +    +    L  F  +  +++Y  RD+
Sbjct: 264 NDFGFMIFHSPYCKLVQKSLARMLLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDRDV 323
Query: 299 EKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXXIHN-KHSELDGKRVVLFSY 357
           EK   + +  L+  K + S L+  Q GNMYT          +      +L GKR+ +FSY
Sbjct: 324 EKAFMKASSELFSQKTKASLLVSNQNGNMYTSSVYGSLASVLAQYSPQQLAGKRIGVFSY 383
Query: 358 GSGLTATMFSLKLSEGHHPFSLSNIL--SVMNVAGKLKSRHEV 398
           GSGL AT++SLK+++   P S  + +  S+ ++  +L SR  V
Sbjct: 384 GSGLAATLYSLKVTQDATPGSALDKITASLCDLKSRLDSRTGV 426

>pdb|2WYA|A Chain A, Crystal Structure Of Human Mitochondrial 3-Hydroxy-3- Methylglutaryl-Coenzyme A Synthase 2 (Hmgcs2) Length = 460

Iteration: 1
 Score =  401 bits (1030), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 200/403 (49%), Positives = 268/403 (66%), Gaps = 8/403 (1%)
Query: 1   MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTA 60
           M K+VGILA+++YFP   V Q  LE ++    GKYT+GLGQ  M FCS  ED+ S+ LT 
Sbjct: 2   MPKDVGILALEVYFPAQYVDQTDLEKYNNVEAGKYTVGLGQTRMGFCSVQEDINSLCLTV 61
Query: 61  VTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGG 120
           V  L+E+ ++    +GRLEVG+ET+IDKSK++KT LM++F+  GNTDIEG+D+TNACYGG
Sbjct: 62  VQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGG 121
Query: 121 TAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESK 180
           TA+LFN  NW+ESSSWDGRY +VVC D AVY  G ARPTGGA AV ML+GP AP+A E  
Sbjct: 122 TASLFNAANWMESSSWDGRYAMVVCGDIAVYPSGNARPTGGAGAVAMLIGPKAPLALERG 181
Query: 181 LRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYE---KLEG--KQ 235
           LRG+HM + YDFYKPNLASEYP+VDGKLS  CYL ALD CY     K +   K  G  + 
Sbjct: 182 LRGTHMENVYDFYKPNLASEYPIVDGKLSIQCYLRALDRCYTSYRKKIQNQWKQAGSDRP 241
Query: 236 FSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQS 295
           F+L +  Y +FH+P+ K+VQKS ARL+FNDF+  +S    +  + L  F  L  +++Y +
Sbjct: 242 FTLDDLQYMIFHTPFCKMVQKSLARLMFNDFLSASSDTQTSLYKGLEAFGGLKLEDTYTN 301
Query: 296 RDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXXI-HNKHSELDGKRVVL 354
           +DL+K   + ++ ++D K + S  +    GNMYT          + H+   EL G R+  
Sbjct: 302 KDLDKALLKASQDMFDKKTKASLYLSTHNGNMYTSSLYGCLASLLSHHSAQELAGSRIGA 361
Query: 355 FSYGSGLTATMFSLKLSEGHHPFSLSNIL--SVMNVAGKLKSR 395
           FSYGSGL A+ FS ++S+   P S  + L  S  ++  +L SR
Sbjct: 362 FSYGSGLAASFFSFRVSQDAAPGSPLDKLVSSTSDLPKRLASR 404

>pdb|1X9E|A Chain A, Crystal Structure Of Hmg-Coa Synthase From Enterococcus Faecalis Length = 383

Iteration: 1
 Score =  114 bits (284), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 160/374 (42%), Gaps = 55/374 (14%)
Query: 5   VGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNL 64
           +GI  +  + PP  +   AL        GK+ IG+GQ+ MA     +D+++ +  A   +
Sbjct: 3   IGIDKISFFVPPYYIDMTALAEARNVDPGKFHIGIGQDQMAVNPISQDIVTFAANAAEAI 62
Query: 65  LEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQI--FEKFGNTDIEGVDSTNACYGGTA 122
           L K   D + I  + VG+E+ ID+SK+    L ++   + F  +     +   ACYG TA
Sbjct: 63  LTKE--DKEAIDMVIVGTESSIDESKAAAVVLHRLMGIQPFARS----FEIKEACYGATA 116
Query: 123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYA-EGPARPTGGAAAVVMLVGPDAPVAFESKL 181
            L    N V  +    +  LVV  D A Y       PT GA AV MLV  +  +    + 
Sbjct: 117 GLQLAKNHV--ALHPDKKVLVVAADIAKYGLNSGGEPTQGAGAVAMLVASEPRILALKED 174
Query: 182 RGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNA 241
                   YDF++P     YP+VDG LS   Y+ +    +  +  +++K  G  F  ++ 
Sbjct: 175 NVMLTQDIYDFWRPT-GHPYPMVDGPLSNETYIQS----FAQVWDEHKKRTGLDF--ADY 227
Query: 242 DYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKV 301
           D   FH PY K+ +K+         +   S   EA +E++                    
Sbjct: 228 DALAFHIPYTKMGKKA--------LLAKISDQTEAEQERIL------------------- 260
Query: 302 SQQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXXIHNKHSELDGKRVVLFSYGSGL 361
                     A+ + S +  ++VGN+YT          + N  +   G ++ LFSYGSG 
Sbjct: 261 ----------ARYEESIIYSRRVGNLYTGSLYLGLISLLENATTLTAGNQIGLFSYGSGA 310
Query: 362 TATMFSLKLSEGHH 375
            A  F+ +L  G+ 
Sbjct: 311 VAEFFTGELVAGYQ 324

>pdb|3V4X|A Chain A, The Biochemical And Structural Basis For Inhibition Of Enterococcus Faecalis Hmg-Coa Synthase, Mvas, By Hymeglusin Length = 388

Iteration: 1
 Score =  113 bits (282), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 160/374 (42%), Gaps = 55/374 (14%)
Query: 5   VGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNL 64
           +GI  +  + PP  +   AL        GK+ IG+GQ+ MA     +D+++ +  A   +
Sbjct: 8   IGIDKISFFVPPYYIDMTALAEARNVDPGKFHIGIGQDQMAVNPISQDIVTFAANAAEAI 67
Query: 65  LEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQI--FEKFGNTDIEGVDSTNACYGGTA 122
           L K   D + I  + VG+E+ ID+SK+    L ++   + F  +     +   ACYG TA
Sbjct: 68  LTKE--DKEAIDMVIVGTESSIDESKAAAVVLHRLMGIQPFARS----FEIKEACYGATA 121
Query: 123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYA-EGPARPTGGAAAVVMLVGPDAPVAFESKL 181
            L    N V  +    +  LVV  D A Y       PT GA AV MLV  +  +    + 
Sbjct: 122 GLQLAKNHV--ALHPDKKVLVVAADIAKYGLNSGGEPTQGAGAVAMLVSSEPRILALKED 179
Query: 182 RGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNA 241
                   YDF++P     YP+VDG LS   Y+ +    +  +  +++K  G  F  ++ 
Sbjct: 180 NVMLTQDIYDFWRPT-GHPYPMVDGPLSNETYIQS----FAQVWDEHKKRTGLDF--ADY 232
Query: 242 DYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKV 301
           D   FH PY K+ +K+         +   S   EA +E++                    
Sbjct: 233 DALAFHIPYTKMGKKA--------LLAKISDQTEAEQERIL------------------- 265
Query: 302 SQQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXXIHNKHSELDGKRVVLFSYGSGL 361
                     A+ + S +  ++VGN+YT          + N  +   G ++ LFSYGSG 
Sbjct: 266 ----------ARYEESIIYSRRVGNLYTGSLYLGLISLLENATTLTAGNQIGLFSYGSGA 315
Query: 362 TATMFSLKLSEGHH 375
            A  F+ +L  G+ 
Sbjct: 316 VAEFFTGELVAGYQ 329

>pdb|2HDB|A Chain A, Hmg-coa Synthase From Enterococcus Faecalis. Mutation Alanine 110 To Glycine Length = 383

Iteration: 1
 Score =  112 bits (280), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 159/374 (42%), Gaps = 55/374 (14%)
Query: 5   VGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNL 64
           +GI  +  + PP  +   AL        GK+ IG+GQ+ MA     +D+++ +  A   +
Sbjct: 3   IGIDKISFFVPPYYIDMTALAEARNVDPGKFHIGIGQDQMAVNPISQDIVTFAANAAEAI 62
Query: 65  LEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQI--FEKFGNTDIEGVDSTNACYGGTA 122
           L K   D + I  + VG+E+ ID+SK+    L ++   + F  +     +    CYG TA
Sbjct: 63  LTKE--DKEAIDMVIVGTESSIDESKAAAVVLHRLMGIQPFARS----FEIKEGCYGATA 116
Query: 123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYA-EGPARPTGGAAAVVMLVGPDAPVAFESKL 181
            L    N V  +    +  LVV  D A Y       PT GA AV MLV  +  +    + 
Sbjct: 117 GLQLAKNHV--ALHPDKKVLVVAADIAKYGLNSGGEPTQGAGAVAMLVASEPRILALKED 174
Query: 182 RGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNA 241
                   YDF++P     YP+VDG LS   Y+ +    +  +  +++K  G  F  ++ 
Sbjct: 175 NVMLTQDIYDFWRPT-GHPYPMVDGPLSNETYIQS----FAQVWDEHKKRTGLDF--ADY 227
Query: 242 DYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKV 301
           D   FH PY K+ +K+         +   S   EA +E++                    
Sbjct: 228 DALAFHIPYTKMGKKA--------LLAKISDQTEAEQERIL------------------- 260
Query: 302 SQQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXXIHNKHSELDGKRVVLFSYGSGL 361
                     A+ + S +  ++VGN+YT          + N  +   G ++ LFSYGSG 
Sbjct: 261 ----------ARYEESIIYSRRVGNLYTGSLYLGLISLLENATTLTAGNQIGLFSYGSGA 310
Query: 362 TATMFSLKLSEGHH 375
            A  F+ +L  G+ 
Sbjct: 311 VAEFFTGELVAGYQ 324

>pdb|1YSL|A Chain A, Crystal Structure Of Hmg-Coa Synthase From Enterococcus Faecalis With Acetoacetyl-Coa Ligand Length = 402

Iteration: 1
 Score =  110 bits (274), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 158/374 (42%), Gaps = 55/374 (14%)
Query: 5   VGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNL 64
           +GI  +  + PP  +   AL        GK+ IG+GQ+ MA     +D+++ +  A   +
Sbjct: 22  IGIDKISFFVPPYYIDMTALAEARNVDPGKFHIGIGQDQMAVNPISQDIVTFAANAAEAI 81
Query: 65  LEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQI--FEKFGNTDIEGVDSTNACYGGTA 122
           L K   D + I  + VG+E+ ID+SK+    L ++   + F  +     +   A YG TA
Sbjct: 82  LTKE--DKEAIDMVIVGTESSIDESKAAAVVLHRLMGIQPFARS----FEIKEAXYGATA 135
Query: 123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYA-EGPARPTGGAAAVVMLVGPDAPVAFESKL 181
            L    N V  +    +  LVV  D A Y       PT GA AV MLV  +  +    + 
Sbjct: 136 GLQLAKNHV--ALHPDKKVLVVAADIAKYGLNSGGEPTQGAGAVAMLVASEPRILALKED 193
Query: 182 RGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNA 241
                   YDF++P     YP+VDG LS   Y+      +  +  +++K  G  F  ++ 
Sbjct: 194 NVMLTQDIYDFWRPT-GHPYPMVDGPLSNETYIQ----SFAQVWDEHKKRTGLDF--ADY 246
Query: 242 DYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKV 301
           D   FH PY K+ +K+         +   S   EA +E++                    
Sbjct: 247 DALAFHIPYTKMGKKA--------LLAKISDQTEAEQERIL------------------- 279
Query: 302 SQQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXXIHNKHSELDGKRVVLFSYGSGL 361
                     A+ + S +  ++VGN+YT          + N  +   G ++ LFSYGSG 
Sbjct: 280 ----------ARYEESIIYSRRVGNLYTGSLYLGLISLLENATTLTAGNQIGLFSYGSGA 329
Query: 362 TATMFSLKLSEGHH 375
            A  F+ +L  G+ 
Sbjct: 330 VAEFFTGELVAGYQ 343

>pdb|3V4N|A Chain A, The Biochemical And Structural Basis For Inhibition Of Enterococcus Faecalis Hmg-coa Synthatse, Mvas, By Hymeglusin Length = 388

Iteration: 1
 Score =  109 bits (272), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 158/374 (42%), Gaps = 55/374 (14%)
Query: 5   VGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNL 64
           +GI  +  + PP  +   AL        GK+ IG+GQ+ MA     +D+++ +  A   +
Sbjct: 8   IGIDKISFFVPPYYIDMTALAEARNVDPGKFHIGIGQDQMAVNPISQDIVTFAANAAEAI 67
Query: 65  LEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQI--FEKFGNTDIEGVDSTNACYGGTA 122
           L K   D + I  + VG+E+ ID+SK+    L ++   + F  +     +   A YG TA
Sbjct: 68  LTKE--DKEAIDMVIVGTESSIDESKAAAVVLHRLMGIQPFARS----FEIKEAXYGATA 121
Query: 123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYA-EGPARPTGGAAAVVMLVGPDAPVAFESKL 181
            L    N V  +    +  LVV  D A Y       PT GA AV MLV  +  +    + 
Sbjct: 122 GLQLAKNHV--ALHPDKKVLVVAADIAKYGLNSGGEPTQGAGAVAMLVSSEPRILALKED 179
Query: 182 RGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNA 241
                   YDF++P     YP+VDG LS   Y+      +  +  +++K  G  F  ++ 
Sbjct: 180 NVMLTQDIYDFWRPT-GHPYPMVDGPLSNETYIQ----SFAQVWDEHKKRTGLDF--ADY 232
Query: 242 DYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKV 301
           D   FH PY K+ +K+         +   S   EA +E++                    
Sbjct: 233 DALAFHIPYTKMGKKA--------LLAKISDQTEAEQERIL------------------- 265
Query: 302 SQQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXXIHNKHSELDGKRVVLFSYGSGL 361
                     A+ + S +  ++VGN+YT          + N  +   G ++ LFSYGSG 
Sbjct: 266 ----------ARYEESIIYSRRVGNLYTGSLYLGLISLLENATTLTAGNQIGLFSYGSGA 315
Query: 362 TATMFSLKLSEGHH 375
            A  F+ +L  G+ 
Sbjct: 316 VAEFFTGELVAGYQ 329

>pdb|1XPK|C Chain C, Crystal Structure Of Staphylococcus Aureus Hmg-Coa Synthase With Hmg- Coa And With Acetoacetyl-Coa And Acetylated Cysteine Length = 388

Iteration: 1
 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 100/408 (24%), Positives = 171/408 (41%), Gaps = 59/408 (14%)
Query: 5   VGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNL 64
           +GI  ++ Y P   V    L         K+ IG+GQ  MA     +D++SM   A  ++
Sbjct: 3   IGIDKINFYVPKYYVDMAKLAEARQVDPNKFLIGIGQTEMAVSPVNQDIVSMGANAAKDI 62
Query: 65  LEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEG-VDSTNACYGGTAA 123
           +     D K+IG + V +E+      + K   +QI    G        +   ACY  T A
Sbjct: 63  ITDE--DKKKIGMVIVATES---AVDAAKAAAVQIHNLLGIQPFARCFEMKEACYAATPA 117
Query: 124 LFNCVNWVESSSWDGRYGLVVCTDSAVYA-EGPARPTGGAAAVVMLVGPDAPVAFESKLR 182
           +    +++ +        LV+ TD+A Y       PT GA AV M++  +  +   ++  
Sbjct: 118 IQLAKDYLATRP--NEKVLVIATDTARYGLNSGGEPTQGAGAVAMVIAHNPSILALNEDA 175
Query: 183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNAD 242
            ++    YDF++P    +YP+VDG LS+  Y+ +    +    ++Y K +GK  SL++  
Sbjct: 176 VAYTEDVYDFWRPT-GHKYPLVDGALSKDAYIRSFQQSW----NEYAKRQGK--SLADFA 228
Query: 243 YFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVS 302
              FH P+ K+ +K+   ++ N         DE  +E+L                     
Sbjct: 229 SLCFHVPFTKMGKKALESIIDN--------ADETTQERL--------------------- 259
Query: 303 QQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXXIHNKHSELDGKRVVLFSYGSGLT 362
               +  Y+  V  +    + VGN+YT          + N+  +  G+ + LFSYGSG  
Sbjct: 260 ----RSGYEDAVDYN----RYVGNIYTGSLYLSLISLLENRDLQA-GETIGLFSYGSGSV 310
Query: 363 ATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEVILHFLQMCFVRY 410
              +S  L EG+      + L        L +R EV +   +  F R+
Sbjct: 311 GEFYSATLVEGY-----KDHLDQAAHKALLNNRTEVSVDAYETFFKRF 353

>pdb|1XPK|B Chain B, Crystal Structure Of Staphylococcus Aureus Hmg-Coa Synthase With Hmg- Coa And With Acetoacetyl-Coa And Acetylated Cysteine Length = 388

Iteration: 1
 Score = 92.4 bits (228), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 99/408 (24%), Positives = 170/408 (41%), Gaps = 59/408 (14%)
Query: 5   VGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNL 64
           +GI  ++ Y P   V    L         K+ IG+GQ  MA     +D++SM   A  ++
Sbjct: 3   IGIDKINFYVPKYYVDMAKLAEARQVDPNKFLIGIGQTEMAVSPVNQDIVSMGANAAKDI 62
Query: 65  LEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEG-VDSTNACYGGTAA 123
           +     D K+IG + V +E+      + K   +QI    G        +   A Y  T A
Sbjct: 63  ITDE--DKKKIGMVIVATESA---VDAAKAAAVQIHNLLGIQPFARCFEMKEAXYAATPA 117
Query: 124 LFNCVNWVESSSWDGRYGLVVCTDSAVYA-EGPARPTGGAAAVVMLVGPDAPVAFESKLR 182
           +    +++ +        LV+ TD+A Y       PT GA AV M++  +  +   ++  
Sbjct: 118 IQLAKDYLATRP--NEKVLVIATDTARYGLNSGGEPTQGAGAVAMVIAHNPSILALNEDA 175
Query: 183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNAD 242
            ++    YDF++P    +YP+VDG LS+  Y+ +    +    ++Y K +GK  SL++  
Sbjct: 176 VAYTEDVYDFWRPT-GHKYPLVDGALSKDAYIRSFQQSW----NEYAKRQGK--SLADFA 228
Query: 243 YFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVS 302
              FH P+ K+ +K+   ++ N         DE  +E+L                     
Sbjct: 229 SLCFHVPFTKMGKKALESIIDN--------ADETTQERL--------------------- 259
Query: 303 QQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXXIHNKHSELDGKRVVLFSYGSGLT 362
               +  Y+  V  +    + VGN+YT          + N+  +  G+ + LFSYGSG  
Sbjct: 260 ----RSGYEDAVDYN----RYVGNIYTGSLYLSLISLLENRDLQA-GETIGLFSYGSGSV 310
Query: 363 ATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEVILHFLQMCFVRY 410
              +S  L EG+      + L        L +R EV +   +  F R+
Sbjct: 311 GEFYSATLVEGY-----KDHLDQAAHKALLNNRTEVSVDAYETFFKRF 353

>pdb|1TVZ|A Chain A, Crystal Structure Of 3-hydroxy-3-methylglutaryl-coenzyme A Synthase From Staphylococcus Aureus Length = 388

Iteration: 1
 Score = 92.0 bits (227), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 99/408 (24%), Positives = 170/408 (41%), Gaps = 59/408 (14%)
Query: 5   VGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNL 64
           +GI  ++ Y P   V    L         K+ IG+GQ  MA     +D++SM   A  ++
Sbjct: 3   IGIDKINFYVPKYYVDMAKLAEARQVDPNKFLIGIGQTEMAVSPVNQDIVSMGANAAKDI 62
Query: 65  LEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEG-VDSTNACYGGTAA 123
           +     D K+IG + V +E+      + K   +QI    G        +   A Y  T A
Sbjct: 63  ITDE--DKKKIGMVIVATES---AVDAAKAAAVQIHNLLGIQPFARCFEMKEAXYAATPA 117
Query: 124 LFNCVNWVESSSWDGRYGLVVCTDSAVYA-EGPARPTGGAAAVVMLVGPDAPVAFESKLR 182
           +    +++ +        LV+ TD+A Y       PT GA AV M++  +  +   ++  
Sbjct: 118 IQLAKDYLATRP--NEKVLVIATDTARYGLNSGGEPTQGAGAVAMVIAHNPSILALNEDA 175
Query: 183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNAD 242
            ++    YDF++P    +YP+VDG LS+  Y+ +    +    ++Y K +GK  SL++  
Sbjct: 176 VAYTEDVYDFWRPT-GHKYPLVDGALSKDAYIRSFQQSW----NEYAKRQGK--SLADFA 228
Query: 243 YFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVS 302
              FH P+ K+ +K+   ++ N         DE  +E+L                     
Sbjct: 229 SLCFHVPFTKMGKKALESIIDN--------ADETTQERL--------------------- 259
Query: 303 QQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXXIHNKHSELDGKRVVLFSYGSGLT 362
               +  Y+  V  +    + VGN+YT          + N+  +  G+ + LFSYGSG  
Sbjct: 260 ----RSGYEDAVDYN----RYVGNIYTGSLYLSLISLLENRDLQA-GETIGLFSYGSGSV 310
Query: 363 ATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEVILHFLQMCFVRY 410
              +S  L EG+      + L        L +R EV +   +  F R+
Sbjct: 311 VEFYSATLVEGY-----KDHLDQAAHKALLNNRTEVSVDAYETFFKRF 353

>pdb|3LEH|A Chain A, The Crystal Structure Of Smu.943c From Streptococcus Mutans Ua159 Length = 425

Iteration: 1
 Score = 88.6 bits (218), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 97/372 (26%), Positives = 158/372 (42%), Gaps = 64/372 (17%)
Query: 29  GASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDK 88
           G    K++ GL    ++     +DV++++  +   +L     D ++I  + + +E+ +D+
Sbjct: 61  GEDPQKFSKGLLLNALSIAPITDDVVTLAAGSANEILTAE--DKEKIDMVILATESSVDQ 118
Query: 89  SKSIKTFLMQIF--EKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCT 146
           SK+   ++  +   + F  +     +   ACY  TAAL      VE    D R  LV+ +
Sbjct: 119 SKAGAVYVHSLLGIQPFARS----FEMKEACYSATAALNYAKLHVEKHP-DTRV-LVLAS 172
Query: 147 DSAVYAEG-PARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVD 205
           D A Y  G P   T GA ++ MLV  D  +        +      DF++PN  +  P V+
Sbjct: 173 DIAKYGIGTPGESTQGAGSIAMLVKKDPRILILHDETLAQTRDIMDFWRPNYTTT-PYVN 231
Query: 206 GKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADY--FVFHSPYNKLVQKSFARLLF 263
           G  S   YL  L T +    ++Y+K    +F +S  D+  F FH P+ KL  K F +++ 
Sbjct: 232 GMYSTKQYLDMLKTTW----AEYQK----RFDVSLTDFAAFCFHLPFPKLALKGFNKIM- 282
Query: 264 NDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQ 323
                    V    +EKL                  KV+            + S L  KQ
Sbjct: 283 ------DKQVPSDLQEKL------------------KVN-----------FEASILYSKQ 307
Query: 324 VGNMYTXXXXXXXXXXIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSNIL 383
           +GN+YT          + N  + + G ++ LFSYGSG  A +F+  L +G      +N L
Sbjct: 308 IGNIYTGSLFLGLLSLLENSQNLVAGDKIALFSYGSGAVAEIFTGTLVKGFKEQLQTNRL 367
Query: 384 SVMNVAGKLKSR 395
                  KLK R
Sbjct: 368 D------KLKRR 373

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	446
2f82_A	450	HMG-COA synthase; HMGS1, transferase; 2.10A {Brass	1e-158
2p8u_A	478	Hydroxymethylglutaryl-COA synthase, cytoplasmic; h	1e-145
2v4w_A	460	Hydroxymethylglutaryl-COA synthase, mitochondrial;	1e-143
1xpm_A	396	3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s	1e-126
3v4n_A	388	HMG-COA synthase; hydroxymethylglutaryl-COA syntha	1e-119
3sqz_A	425	Putative hydroxymethylglutaryl-COA synthase; thiol	1e-112
2h84_A	374	Steely1; thiolase-fold, type III polyketide syntha	1e-06
3awk_A	402	Chalcone synthase-like polyketide synthase; type I	3e-06
3ov2_A	393	Curcumin synthase; type III polyketide synthase, t	2e-05
1xes_A	413	Dihydropinosylvin synthase; native structure, tran	3e-05
1i88_A	389	CHS2, chalcone synthase 2; polyketide synthase, tr	4e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-04
1u0m_A	382	Putative polyketide synthase; type III polyketide	1e-04
3e1h_A	465	PKSIIINC, putative uncharacterized protein; resorc	3e-04
3euo_A	379	Type III pentaketide synthase; alpha helix, acyltr	3e-04
2p0u_A	413	Stilbenecarboxylate synthase 2; polyketide synthas	5e-04
1ee0_A	402	2-pyrone synthase; polyketide synthase, thiolase f	6e-04
1ted_A	393	PKS18; thiolase fold, substrate binding tunnel, tr	8e-04

>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* Length = 450

 Score =  455 bits (1170), Expect = e-158
 Identities = 342/409 (83%), Positives = 378/409 (92%), Gaps = 1/409 (0%)

Query: 2   AKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAV 61
           AKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQ+C+AFC+E+EDVISMS  AV
Sbjct: 1   AKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQDCLAFCTELEDVISMSFNAV 60

Query: 62  TNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGT 121
           T+LLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQ+FEK GNTD+EGVDSTNACYGGT
Sbjct: 61  TSLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEGVDSTNACYGGT 120

Query: 122 AALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKL 181
           AAL NCVNWVES+SWDGRYGLV+CTDSAVYAEGPARPTGGAAA+ ML+GPDAP+ FESKL
Sbjct: 121 AALLNCVNWVESNSWDGRYGLVICTDSAVYAEGPARPTGGAAAIAMLIGPDAPIVFESKL 180

Query: 182 RGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNA 241
           RGSHM+H YDFYKPNLASEYPVVDGKLSQTCYLMALD+CYK LC+K+EKLEGK+FS+++A
Sbjct: 181 RGSHMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKLEGKEFSINDA 240

Query: 242 DYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKV 301
           DYFVFHSPYNKLVQKSFARLL+NDF+RNASS+DEAAKEK  P+S+LS DESYQSRDLEKV
Sbjct: 241 DYFVFHSPYNKLVQKSFARLLYNDFLRNASSIDEAAKEKFTPYSSLSLDESYQSRDLEKV 300

Query: 302 SQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGL 361
           SQQLAK  YDAKVQP+TL+PKQVGNMYTASLYAA ASL+HNKHS+L GKRVV+FSYGSG 
Sbjct: 301 SQQLAKTYYDAKVQPTTLVPKQVGNMYTASLYAAFASLVHNKHSDLAGKRVVMFSYGSGS 360

Query: 362 TATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEV-ILHFLQMCFVR 409
           TATMFSL+L E   PFSLSNI SVM+V GKLK+RHE     F++   + 
Sbjct: 361 TATMFSLRLCENQSPFSLSNIASVMDVGGKLKARHEYAPEKFVETMKLM 409

>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} Length = 478

 Score =  421 bits (1082), Expect = e-145
 Identities = 212/417 (50%), Positives = 283/417 (67%), Gaps = 9/417 (2%)

Query: 2   AKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAV 61
           + +VGI+A++IYFP   V Q  LE +DG   GKYTIGLGQ  M FC++ ED+ S+ +T V
Sbjct: 22  SMDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQAKMGFCTDREDINSLCMTVV 81

Query: 62  TNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGT 121
            NL+E+  +    IGRLEVG+ET+IDKSKS+KT LMQ+FE+ GNTDIEG+D+TNACYGGT
Sbjct: 82  QNLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGIDTTNACYGGT 141

Query: 122 AALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKL 181
           AA+FN VNW+ESSSWDGRY LVV  D AVYA G ARPTGG  AV +L+GP+AP+ FE  L
Sbjct: 142 AAVFNAVNWIESSSWDGRYALVVAGDIAVYATGNARPTGGVGAVALLIGPNAPLIFERGL 201

Query: 182 RGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEK-----LEGKQF 236
           RG+HM HAYDFYKP++ SEYP+VDGKLS  CYL ALD CY   C K           K F
Sbjct: 202 RGTHMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYCKKIHAQWQKEGNDKDF 261

Query: 237 SLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSR 296
           +L++  + +FHSPY KLVQKS AR+L NDF+ + +    +    L  F  +  +++Y  R
Sbjct: 262 TLNDFGFMIFHSPYCKLVQKSLARMLLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDR 321

Query: 297 DLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLI-HNKHSELDGKRVVLF 355
           D+EK   + +  L+  K + S L+  Q GNMYT+S+Y +LAS++      +L GKR+ +F
Sbjct: 322 DVEKAFMKASSELFSQKTKASLLVSNQNGNMYTSSVYGSLASVLAQYSPQQLAGKRIGVF 381

Query: 356 SYGSGLTATMFSLKLSEGHHPFSLSN--ILSVMNVAGKLKSRHEV-ILHFLQMCFVR 409
           SYGSGL AT++SLK+++   P S  +    S+ ++  +L SR  V    F +   +R
Sbjct: 382 SYGSGLAATLYSLKVTQDATPGSALDKITASLCDLKSRLDSRTGVAPDVFAENMKLR 438

>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* Length = 396

 Score =  371 bits (954), Expect = e-126
 Identities = 96/396 (24%), Positives = 163/396 (41%), Gaps = 57/396 (14%)

Query: 4   NVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTN 63
            +GI  ++ Y P   V    L         K+ IG+GQ  MA     +D++SM   A  +
Sbjct: 2   AIGIDKINFYVPKYYVDMAKLAEARQVDPNKFLIGIGQTEMAVSPVNQDIVSMGANAAKD 61

Query: 64  LLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAA 123
           ++     D K+IG + V +E+ +D +K+    +  +            +   ACY  T A
Sbjct: 62  IIT--DEDKKKIGMVIVATESAVDAAKAAAVQIHNLLG--IQPFARCFEMKEACYAATPA 117

Query: 124 LFNCVNWVESSSWDGRYGLVVCTDSAVYAEG-PARPTGGAAAVVMLVGPDAPVAFESKLR 182
           +    +++   +      LV+ TD+A Y       PT GA AV M++  +  +   ++  
Sbjct: 118 IQLAKDYLA--TRPNEKVLVIATDTARYGLNSGGEPTQGAGAVAMVIAHNPSILALNEDA 175

Query: 183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNAD 242
            ++    YDF++P    +YP+VDG LS+  Y+ +    +     +         SL++  
Sbjct: 176 VAYTEDVYDFWRPT-GHKYPLVDGALSKDAYIRSFQQSWNEYAKRQ------GKSLADFA 228

Query: 243 YFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVS 302
              FH P+ K+ +K+   ++ N         DE  +E+L                     
Sbjct: 229 SLCFHVPFTKMGKKALESIIDNA--------DETTQERL--------------------- 259

Query: 303 QQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLT 362
                    +  + +    + VGN+YT SLY +L SL+ N      G+ + LFSYGSG  
Sbjct: 260 --------RSGYEDAVDYNRYVGNIYTGSLYLSLISLLEN-RDLQAGETIGLFSYGSGSV 310

Query: 363 ATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEV 398
              +S  L EG       + L        L +R EV
Sbjct: 311 GEFYSATLVEG-----YKDHLDQAAHKALLNNRTEV 341

>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* Length = 388

 Score =  352 bits (904), Expect = e-119
 Identities = 104/399 (26%), Positives = 163/399 (40%), Gaps = 56/399 (14%)

Query: 1   MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTA 60
            +  +GI  +  + PP  +   AL        GK+ IG+GQ+ MA     +D+++ +  A
Sbjct: 4   GSMTIGIDKISFFVPPYYIDMTALAEARNVDPGKFHIGIGQDQMAVNPISQDIVTFAANA 63

Query: 61  VTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGG 120
              +L K   D + I  + VG+E+ ID+SK+    L ++            +   A YG 
Sbjct: 64  AEAILTKE--DKEAIDMVIVGTESSIDESKAAAVVLHRLMG--IQPFARSFEIKEAXYGA 119

Query: 121 TAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEG-PARPTGGAAAVVMLVGPDAPVAFES 179
           TA L    N V  +    +  LVV  D A Y       PT GA AV MLV  +  +    
Sbjct: 120 TAGLQLAKNHV--ALHPDKKVLVVAADIAKYGLNSGGEPTQGAGAVAMLVSSEPRILALK 177

Query: 180 KLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLS 239
           +         YDF++P     YP+VDG LS   Y+ +    +     +           +
Sbjct: 178 EDNVMLTQDIYDFWRPT-GHPYPMVDGPLSNETYIQSFAQVWDEHKKRT------GLDFA 230

Query: 240 NADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLE 299
           + D   FH PY K+ +K+    + +          EA +E++                  
Sbjct: 231 DYDALAFHIPYTKMGKKALLAKISDQ--------TEAEQERI------------------ 264

Query: 300 KVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGS 359
                       A+ + S +  ++VGN+YT SLY  L SL+ N  +   G ++ LFSYGS
Sbjct: 265 -----------LARYEESIIYSRRVGNLYTGSLYLGLISLLENATTLTAGNQIGLFSYGS 313

Query: 360 GLTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEV 398
           G  A  F+ +L  G       N L        L +R E+
Sbjct: 314 GAVAEFFTGELVAG-----YQNHLQKETHLALLDNRTEL 347

>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} Length = 374

 Score = 49.0 bits (117), Expect = 1e-06
 Identities = 53/332 (15%), Positives = 98/332 (29%), Gaps = 64/332 (19%)

Query: 50  VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFG-NTDI 108
            + V  ++  A    L+ +  D   I  +   + T I     I     ++ +  G N D+
Sbjct: 92  KKVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTGII----IPDVNFKLIDLLGLNKDV 147

Query: 109 EGVDSTN-ACYGGTAALFNCVNWVESSSWDGRYGLVVCTD--SAVYAEGPARPTG----- 160
           E V      C  G ++L    +  ++S       LVVCT+  S  ++             
Sbjct: 148 ERVSLNLMGCLAGLSSLRTAASLAKASP--RNRILVVCTEVCSLHFSNTDGGDQMVASSI 205

Query: 161 ---GAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMAL 217
              G+AA ++   P        +     +  + +   PN              T   M  
Sbjct: 206 FADGSAAYIIGCNPRIE-----ETPLYEVMCSINRSFPN--------------TENAMVW 246

Query: 218 DTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAA 277
           D           + EG    L  +   V  S     V     +         ++   E  
Sbjct: 247 D----------LEKEGWNLGLDASIPIVIGSGIEAFVDTLLDKAKLQTSTAISAKDCEFL 296

Query: 278 KEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALA 337
               G               L  +   L   +   + + +  +    GNM +AS+   + 
Sbjct: 297 IHTGGK------------SILMNIENSLG--IDPKQTKNTWDVYHAYGNMSSASVIFVMD 342

Query: 338 SLIHNKHSELDGKRVVLFSYGSGLTATMFSLK 369
                + S+      +  ++G GL      LK
Sbjct: 343 HA---RKSKSLPTYSISLAFGPGLAFEGCFLK 371

>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A Length = 393

 Score = 45.6 bits (108), Expect = 2e-05
 Identities = 55/349 (15%), Positives = 101/349 (28%), Gaps = 79/349 (22%)

Query: 50  VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFG-NTDI 108
           VE++  ++  A    ++++     +I  L   S + ID    +     ++    G    +
Sbjct: 99  VEEIPRLAKEAAEKAIKEWGRPKSEITHLVFCSISGID----MPGADYRLATLLGLPLTV 154

Query: 109 EGVDSTNA-CYGGTAALFNCVNWVESSSWDGRYGLVVCTD-SAVYAEGPARPT------- 159
             +   +  C+ G A L    +  E++   G   LVV  + + +   GP           
Sbjct: 155 NRLMIYSQACHMGAAMLRIAKDLAENNR--GARVLVVACEITVLSFRGPNEGDFEALAGQ 212

Query: 160 ----GGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLM 215
                GA AVV  VG D     E  +     +      +         V G L       
Sbjct: 213 AGFGDGAGAVV--VGADPLEGIEKPIYEIAAAMQETVAESQ-----GAVGGHLRAF---- 261

Query: 216 ALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRN---ASS 272
                            G  F   N    +       ++  +  R L            +
Sbjct: 262 -----------------GWTFYFLNQ---LP-----AIIADNLGRSLERALAPLGVREWN 296

Query: 273 VDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASL 332
                                    ++ +  +L   L   K+  +  +  + GNM +A++
Sbjct: 297 DVFWVAHPGNW------------AIIDAIEAKLQ--LSPDKLSTARHVFTEYGNMQSATV 342

Query: 333 YAALASLIHNKHSELDGKR------VVLFSYGSGLTATMFSLKLSEGHH 375
           Y  +  L      E            VL  +G GL+     L+    HH
Sbjct: 343 YFVMDELRKRSAVEGRSTTGDGLQWGVLLGFGPGLSIETVVLRSMPLHH 391

>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A Length = 413

 Score = 45.0 bits (106), Expect = 3e-05
 Identities = 58/346 (16%), Positives = 109/346 (31%), Gaps = 85/346 (24%)

Query: 50  VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFG-NTDI 108
             +V  ++  A    ++++      I  L   S T  D    +     ++ +  G +  +
Sbjct: 122 AMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPD----LPGADFEVAKLLGLHPSV 177

Query: 109 EGVD-STNACYGGTAALFNCVNWVESSSWDGRYGLVVCTD-SAVYAEGPARPT------- 159
           + V    + C+ G   L    +  E++   G   LV+C++ +AV   GP+          
Sbjct: 178 KRVGVFQHGCFAGGTVLRMAKDLAENNR--GARVLVICSETTAVTFRGPSETHLDSLVGQ 235

Query: 160 ----GGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLM 215
                GA+A++  VG D     E       +        PN  SE   + GK+ +     
Sbjct: 236 ALFGDGASALI--VGADPIPQVEK--ACFEIVWTAQTVVPN--SEG-AIGGKVREVGLTF 288

Query: 216 ALD-----TCYKCLCSKYEK-LEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRN 269
            L           + +   +     + S  N  ++V H                      
Sbjct: 289 QLKGAVPDLISANIENCMVEAFSQFKISDWNKLFWVVHPG-------------------- 328

Query: 270 ASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYT 329
             ++ +  + KL                           L   K+ P+  +  + GNM +
Sbjct: 329 GRAILDRVEAKLN--------------------------LDPTKLIPTRHVMSEYGNMSS 362

Query: 330 ASLYAALASLIHN------KHSELDGKRVVLFSYGSGLTATMFSLK 369
           A ++  L              +    +  VLF +G GLT     LK
Sbjct: 363 ACVHFILDQTRKASLQNGCSTTGEGLEMGVLFGFGPGLTIETVVLK 408

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.8 bits (105), Expect = 5e-05
 Identities = 70/456 (15%), Positives = 125/456 (27%), Gaps = 161/456 (35%)

Query: 1   MA---KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMS 57
           +    K    +A+D      C+  +     D      + + L       C+  E V+ M 
Sbjct: 158 VLGSGKTW--VALD-----VCLSYKVQCKMDF---KIFWLNLKN-----CNSPETVLEM- 201

Query: 58  LTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIF--EKFGNT-DIEGVDST 114
              +  LL  Y+IDP    R +  S  +  +  SI+  L ++   + + N   +  +   
Sbjct: 202 ---LQKLL--YQIDPNWTSRSD-HSSNIKLRIHSIQAELRRLLKSKPYENCLLV--LL-- 251

Query: 115 NACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAP 174
           N         FN                + C                    ++L      
Sbjct: 252 NVQNAKAWNAFN----------------LSCK-------------------ILLTTRFKQ 276

Query: 175 VAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLS----QTCYLMALDTCYKCLCSKYEK 230
           V               DF      +   +    ++    +   L+      K L  + + 
Sbjct: 277 VT--------------DFLSAATTTHISLDHHSMTLTPDEVKSLLL-----KYLDCRPQD 317

Query: 231 L--EGKQFS--------------LSNADYF--VFHSPYNKLVQKSFARL-------LFND 265
           L  E    +              L+  D +  V       +++ S   L       +F+ 
Sbjct: 318 LPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDR 377

Query: 266 ---FMRNASSVDEAAKEKLGPFSTLS---GDESYQSRDLEKVSQQLAKPLYDAKVQPSTL 319
              F  +A          + P   LS    D      D+  V  +L K          +L
Sbjct: 378 LSVFPPSA---------HI-PTILLSLIWFDVIKS--DVMVVVNKLHK---------YSL 416

Query: 320 IPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSE------- 372
           + KQ     T S+ +    L     +E    R ++  Y    T     L           
Sbjct: 417 VEKQ-PKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYS 475

Query: 373 --GHHPFSLSNILSVMNVAGKLKSRHEVIL--HFLQ 404
             GHH       L  +    ++     V L   FL+
Sbjct: 476 HIGHH-------LKNIEHPERMTLFRMVFLDFRFLE 504

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.1 bits (98), Expect = 4e-04
 Identities = 30/196 (15%), Positives = 57/196 (29%), Gaps = 51/196 (26%)

Query: 191 DFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCS-----------KY---EKLEGKQF 236
             +K +L  + P        T  + ++    K                Y   +  +    
Sbjct: 410 KLHKYSLVEKQPK-----ESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDL 464

Query: 237 SLSNAD-YFVFHSPYN-KLVQKS-----FARLLFN-DFMRNASSVDEAAKEKLGPF-STL 287
                D YF  H  ++ K ++       F  +  +  F+      D  A    G   +TL
Sbjct: 465 IPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTL 524

Query: 288 SGDESYQSRDLEKVSQQLAK--PLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHS 345
                     L+     +    P Y+  V           N     L     +LI +K++
Sbjct: 525 Q--------QLKFYKPYICDNDPKYERLV-----------NAILDFLPKIEENLICSKYT 565

Query: 346 ELDGKRVVLFSYGSGL 361
           +L   R+ L +    +
Sbjct: 566 DL--LRIALMAEDEAI 579

>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 Length = 382

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 47/345 (13%), Positives = 89/345 (25%), Gaps = 83/345 (24%)

Query: 50  VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFG-NTDI 108
             +  S     +   L+  ++    I  +   S T      S+  +L+    + G ++  
Sbjct: 81  EREAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGFM-MPSLTAWLIN---EMGFDSTT 136

Query: 109 EGV-DSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTG------- 160
             +  +   C  G AA+    ++  +        L+V  +       P            
Sbjct: 137 RQIPIAQLGCAAGGAAINRAHDFCTAYP--EANALIVACEFCSLCYQPTDLGVGSLLCNG 194

Query: 161 ----GAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMA 216
               G AA V  V           L  +              +E   +   +  T +   
Sbjct: 195 LFGDGIAAAV--VRGRGGTGVR--LERNGSYLIPK-------TE-DWIMYDVKATGFHFL 242

Query: 217 LDTCYKCLCSKYEK-----LEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNAS 271
           LD                      +  S+ D+++ H            R+L         
Sbjct: 243 LDKRVPATMEPLAPALKELAGEHGWDASDLDFYIVH-AGGP-------RIL--------- 285

Query: 272 SVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTAS 331
              +     L                           +     + S     + GN+ +A 
Sbjct: 286 ---DDLSTFLE--------------------------VDPHAFRFSRATLTEYGNIASAV 316

Query: 332 LYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGHHP 376
           +  AL  L      E +G R +L  +G G+TA M           
Sbjct: 317 VLDALRRLFDEGGVE-EGARGLLAGFGPGITAEMSLGCWQTADVR 360

>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} Length = 465

 Score = 42.0 bits (98), Expect = 3e-04
 Identities = 54/432 (12%), Positives = 112/432 (25%), Gaps = 110/432 (25%)

Query: 5   VGILAMDIYFPPTCVQQEALEA------HDGASKGKYTI-----GLGQECMAFCSE---- 49
           + I  + + +PP  +  +A++        +  +  K        G+ Q       +    
Sbjct: 32  LSITGLGVQYPPYSLGPDAIDILSKRYHPESPAMKKVLAINRYTGIDQRSSIGNPDHPLV 91

Query: 50  ---------------VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKT 94
                          + D + +++ A    + + ++ P QI  +   + T          
Sbjct: 92  NKPNPPTVKELHEVFMSDGVPLAVEASRKAMAEARLVPAQITHMVSTTCTDSA----NPG 147

Query: 95  FLMQIFEKFG-NTDIEGVDSTN-ACYGGTAALFNCVNWVESSSWDGRYG--LVVCTD-SA 149
           +   + ++ G +  +E V      C GG AAL    N     +  G+    LV+  + S 
Sbjct: 148 YDHYVAKELGLSDRLEKVLLHGIGCSGGLAALRTAANLCLGHTARGKPARILVLALEVST 207

Query: 150 VYAEGPARPT-------------GGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPN 196
                                     A+ V+L         +  +               
Sbjct: 208 TMVRSELESIDALQETRIGIALFSDCASAVILSNGIGEAPGKPAIYDLLGWENRVIPDSE 267

Query: 197 LASEYPVVDGKLSQTCYL-------MALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSP 249
               + V                   +L   Y  L S  +      +       +  H  
Sbjct: 268 HDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQKPADFDWAMHPG 327

Query: 250 YNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPL 309
                                +++   A+  +G    L+ +    S D            
Sbjct: 328 --------------------GATILSGAESAMG----LTPEHMRASYD------------ 351

Query: 310 YDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSEL-----DGKRVVLFSYGSGLTAT 364
                          GN  +A++++ L  L       L       + VV  ++G G+   
Sbjct: 352 ----------RYINHGNSSSATIFSVLNRLREKDMDALAPGGKVKEYVVGCAFGPGINVE 401

Query: 365 MFSLKLSEGHHP 376
           M  LK       
Sbjct: 402 MCMLKRRMNAPA 413

>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A Length = 393

 Score = 40.5 bits (95), Expect = 8e-04
 Identities = 51/337 (15%), Positives = 93/337 (27%), Gaps = 72/337 (21%)

Query: 50  VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFG-NTDI 108
            E  + +++      L        +IG L + + T    +  +   +++   + G +  I
Sbjct: 110 YEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFI-APGVDVAIVK---ELGLSPSI 165

Query: 109 EGVDSTNA-CYGGTAALFNCVNWVESSSWDGRYGLVVCTD-SAVYAEGPARPTG------ 160
             V      C     AL    N+V +        LVVC +  +V A              
Sbjct: 166 SRVVVNFMGCAAAMNALGTATNYVRAHP--AMKALVVCIELCSVNAVFADDINDVVIHSL 223

Query: 161 ---GAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDG----KLSQTCY 213
              G AA+V+          E        S +             V       +LS+   
Sbjct: 224 FGDGCAALVIGASQVQEKL-EPGKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLP 282

Query: 214 LMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSV 273
                     +    E L      +S+ D +  H P          +++           
Sbjct: 283 GYIFSGVAPVV---TEMLWDNGLQISDIDLWAIH-PGGP-------KII----------- 320

Query: 274 DEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLY 333
            E +   LG                          +       S  +  + GNM + SL 
Sbjct: 321 -EQSVRSLG--------------------------ISAELAAQSWDVLARFGNMLSVSLI 353

Query: 334 AALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKL 370
             L +++    S       V F++G G+T       +
Sbjct: 354 FVLETMVQQAESAKAISTGVAFAFGPGVTVEGMLFDI 390

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	446
2v4w_A	460	Hydroxymethylglutaryl-COA synthase, mitochondrial;	100.0
2wya_A	460	Hydroxymethylglutaryl-COA synthase, mitochondrial;	100.0
2p8u_A	478	Hydroxymethylglutaryl-COA synthase, cytoplasmic; h	100.0
2f82_A	450	HMG-COA synthase; HMGS1, transferase; 2.10A {Brass	100.0
3v4n_A	388	HMG-COA synthase; hydroxymethylglutaryl-COA syntha	100.0
3sqz_A	425	Putative hydroxymethylglutaryl-COA synthase; thiol	100.0
1xpm_A	396	3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s	100.0
4ewp_A	350	3-oxoacyl-[acyl-carrier-protein] synthase 3; trans	100.0
3il3_A	323	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	100.0
3gwa_A	365	3-oxoacyl-(acyl-carrier-protein) synthase III; str	100.0
4efi_A	354	3-oxoacyl-(acyl-carrier protein) synthase; structu	100.0
4dfe_A	333	3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci	100.0
3il6_A	321	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	100.0
3h78_A	359	PQS biosynthetic enzyme; PQSD, anthranilic acid, a	100.0
3s21_A	345	3-oxoacyl-[ACP] synthase III; non-decarboxylative	100.0
3led_A	392	3-oxoacyl-acyl carrier protein synthase III; struc	100.0
3s3l_A	357	CERJ; acyltransferase, FABH homologue, KS III homo	100.0
2x3e_A	331	3-oxoacyl-[acyl-carrier-protein] synthase 3; HED,	100.0
1hnj_A	317	Beta-ketoacyl-acyl carrier protein synthase III; F	100.0
1mzj_A	339	Beta-ketoacylsynthase III; beta-ketosynthase, arom	100.0
3euo_A	379	Type III pentaketide synthase; alpha helix, acyltr	100.0
3ov2_A	393	Curcumin synthase; type III polyketide synthase, t	100.0
2ebd_A	309	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	100.0
1zow_A	313	3-oxoacyl-[acyl-carrier-protein] synthase III; FAB	100.0
3e1h_A	465	PKSIIINC, putative uncharacterized protein; resorc	100.0
1ted_A	393	PKS18; thiolase fold, substrate binding tunnel, tr	100.0
1u6e_A	335	3-oxoacyl-[acyl-carrier-protein] synthase III; tra	100.0
1ub7_A	322	3-oxoacyl-[acyl-carrier protein] synthase; fatty a	100.0
2d3m_A	406	Pentaketide chromone synthase; chalcone synthase,	100.0
3oit_A	387	OS07G0271500 protein; type III polyketide synthase	100.0
1ee0_A	402	2-pyrone synthase; polyketide synthase, thiolase f	100.0
2p0u_A	413	Stilbenecarboxylate synthase 2; polyketide synthas	100.0
3a5r_A	387	Benzalacetone synthase; chalcone synthase, type II	100.0
1u0m_A	382	Putative polyketide synthase; type III polyketide	100.0
1i88_A	389	CHS2, chalcone synthase 2; polyketide synthase, tr	100.0
3awk_A	402	Chalcone synthase-like polyketide synthase; type I	100.0
2h84_A	374	Steely1; thiolase-fold, type III polyketide syntha	100.0
3v7i_A	413	Putative polyketide synthase; type III polyketide	100.0
1xes_A	413	Dihydropinosylvin synthase; native structure, tran	100.0
3tsy_A	979	Fusion protein 4-coumarate--COA ligase 1, resvera	100.0
3lma_A	347	Stage V sporulation protein AD (spovad); NESG, str	99.9
4e1l_A	395	Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich,	99.75
3ss6_A	394	Acetyl-COA acetyltransferase; structural genomics,	99.74
4dd5_A	396	Acetyl-COA acetyltransferase; structural genomics,	99.74
1tqy_A	424	Beta-ketoacyl synthase/acyl transferase; alpha-bet	99.73
3o04_A	413	LMO2201 protein, beta-keto-acyl carrier protein sy	99.72
2iik_A	418	3-ketoacyl-COA thiolase, peroxisomal; fatty acid m	99.71
1j3n_A	408	3-oxoacyl-(acyl-carrier protein) synthase II; cond	99.68
2gqd_A	437	3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli	99.68
1ox0_A	430	Beta ketoacyl-acyl carrier protein synthase; trans	99.68
1e5m_A	416	KAS II, beta ketoacyl acyl carrier protein synthas	99.67
3ho9_A	427	3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF,	99.65
3kzu_A	428	3-oxoacyl-(acyl-carrier-protein) synthase II; seat	99.64
3svk_A	407	Acetyl-COA acetyltransferase; ssgcid, NIH, niaid,	99.63
4ewg_A	412	Beta-ketoacyl synthase; ssgcid, structural genomic	99.63
3goa_A	387	3-ketoacyl-COA thiolase; metabolism, fatty acid, p	99.62
4ddo_A	451	3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci	99.62
1ulq_A	401	Putative acetyl-COA acetyltransferase; structural	99.61
1wl4_A	397	Acetyl-coenzyme A acetyltransferase 2; thiolase fo	99.61
2vu1_A	392	Acetyl-COA acetyltransferase; acyltransferase, PHB	99.61
2iwz_A	438	3-oxoacyl-[acyl-carrier-protein] synthase; mitocho	99.6
2ix4_A	431	3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke	99.57
2ib8_A	395	Acetyl-COA acetyltransferase; thiolase fold, potas	99.57
1tqy_B	415	Actinorhodin polyketide putative beta-ketoacyl SY;	99.57
2gp6_A	434	3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol	99.56
1afw_A	393	3-ketoacetyl-COA thiolase; fatty acid metabolism;	99.55
1wdk_C	390	3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame	99.55
2wu9_A	442	3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o	99.55
3mqd_A	428	Beta-ketoacyl synthase; ssgcid, ALS collaborative	99.55
2wge_A	416	3-oxoacyl-[acyl-carrier-protein] synthase 1; beta	99.53
2vba_A	406	3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop	99.51
2hg4_A	917	DEBS, 6-deoxyerythronolide B synthase; ketosynthas	99.45
2qo3_A	915	Eryaii erythromycin polyketide synthase modules 3;	99.44
3hhd_A	965	Fatty acid synthase; transferase, multienzyme, meg	99.33
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.07
4egv_A	520	Acetyl-COA acetyltransferase; NEW SUB-family, thio	99.02
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	98.57
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	98.49
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	98.37
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	98.34
3lma_A	347	Stage V sporulation protein AD (spovad); NESG, str	91.82
3s3l_A	357	CERJ; acyltransferase, FABH homologue, KS III homo	89.96
3svk_A	407	Acetyl-COA acetyltransferase; ssgcid, NIH, niaid,	89.87
4e1l_A	395	Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich,	89.87
1ulq_A	401	Putative acetyl-COA acetyltransferase; structural	88.82
2vu1_A	392	Acetyl-COA acetyltransferase; acyltransferase, PHB	88.62
4dd5_A	396	Acetyl-COA acetyltransferase; structural genomics,	87.93
3goa_A	387	3-ketoacyl-COA thiolase; metabolism, fatty acid, p	87.2
2x3e_A	331	3-oxoacyl-[acyl-carrier-protein] synthase 3; HED,	86.71
1zow_A	313	3-oxoacyl-[acyl-carrier-protein] synthase III; FAB	86.05
1hnj_A	317	Beta-ketoacyl-acyl carrier protein synthase III; F	85.9
1mzj_A	339	Beta-ketoacylsynthase III; beta-ketosynthase, arom	85.71
2ebd_A	309	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	85.65
3ss6_A	394	Acetyl-COA acetyltransferase; structural genomics,	85.64
3il3_A	323	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	85.49
3gwa_A	365	3-oxoacyl-(acyl-carrier-protein) synthase III; str	85.43
1wl4_A	397	Acetyl-coenzyme A acetyltransferase 2; thiolase fo	85.26
4dfe_A	333	3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci	85.13
3s21_A	345	3-oxoacyl-[ACP] synthase III; non-decarboxylative	85.06
4egv_A	520	Acetyl-COA acetyltransferase; NEW SUB-family, thio	84.94
1u6e_A	335	3-oxoacyl-[acyl-carrier-protein] synthase III; tra	83.02
1ub7_A	322	3-oxoacyl-[acyl-carrier protein] synthase; fatty a	82.73
4ewp_A	350	3-oxoacyl-[acyl-carrier-protein] synthase 3; trans	82.67
2ib8_A	395	Acetyl-COA acetyltransferase; thiolase fold, potas	82.63
1ted_A	393	PKS18; thiolase fold, substrate binding tunnel, tr	82.16
1wdk_C	390	3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame	82.08
3h78_A	359	PQS biosynthetic enzyme; PQSD, anthranilic acid, a	81.7

>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}

Probab=100.00  E-value=1.3e-77  Score=625.41  Aligned_cols=428  Identities=48%  Similarity=0.843  Sum_probs=388.0

Q ss_pred             CCceeEEeEEEEecCCccccHHHHHHhcCCCcceeEEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEE
Q 013297            1 MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEV   80 (446)
Q Consensus         1 ~~~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~   80 (446)
                      ||++|||.+||+|+|+++|+++||++..|++++||+.|+|+++++|++++||+++||++|+++||+++|++|++||+||+
T Consensus         2 m~~~VgI~~~g~y~P~~~v~~~~l~~~~~~~~~~i~~~~Gi~~r~~~~~~E~~~~ma~~Aa~~al~~a~i~~~~Id~ii~   81 (460)
T 2wya_A            2 MPKDVGILALEVYFPAQYVDQTDLEKYNNVEAGKYTVGLGQTRMGFCSVQEDINSLCLTVVQRLMERIQLPWDSVGRLEV   81 (460)
T ss_dssp             CCSSCEEEEEEEECCSEEEEHHHHHHHTTCCTTCCCCCCCCCEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGEEEEEE
T ss_pred             CCCceEEEEEEEECCCeEEcHHHHHHHhCCCHHHHHHhhCcEEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence            99999999999999999999999999999999999989999999999999999999999999999999999999999999


Q ss_pred             EeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCccCCCCCCccc
Q 013297           81 GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTG  160 (446)
Q Consensus        81 ~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~~~~~~~t~  160 (446)
                      +|+|+++.+|+++++|+++||+.|++++.+||+++||+||++||++|.+||++|.++++.++|+++|+..|.+++.++||
T Consensus        82 aT~t~~~~~ps~a~~v~~~l~~~g~~~~~a~D~~~aC~g~~~al~~A~~~i~~g~~~~~lvvv~~s~~~~~~d~~~~~~~  161 (460)
T 2wya_A           82 GTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGDIAVYPSGNARPTG  161 (460)
T ss_dssp             ECSCCSCSSSCHHHHHGGGTGGGTCCCCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEECCCSSTTGGGC
T ss_pred             EeCCCCCCCCchHHHHHHHHhccCCCCeeEechhhhhhhHHHHHHHHHHHHHhccccceEEEEEeccccccccccccccC
Confidence            99999999999999999999986778999999999999999999999999999988677899999999999998899999


Q ss_pred             cccceeeeeccCCCcccccccccccccccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhh-----hCCC
Q 013297          161 GAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKL-----EGKQ  235 (446)
Q Consensus       161 GdGAvA~Ll~~~~~~~~~~~~~g~~~~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~-----~~~~  235 (446)
                      ||||+|||+++++++.+..+..++++.+.+|||+|..++++|.+||+++..+|+.+.+++|+.+.+++...     +..+
T Consensus       162 GdGA~A~l~~~~~~~~~~~~~~~~~~~~~~df~~p~~~s~~~~~dg~~s~~~~~~~g~~v~~~~~~~~~~~~~~~l~~~~  241 (460)
T 2wya_A          162 GAGAVAMLIGPKAPLALERGLRGTHMENVYDFYKPNLASEYPIVDGKLSIQCYLRALDRCYTSYRKKIQNQWKQAGSDRP  241 (460)
T ss_dssp             EEEEEEEEEESSCSEEECTTCCEEEECCCCSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred             cchHHhhhcccCCcceeecccccccccchhhhhccCCCCCCcccCCccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHcC
Confidence            99999999999998766667788889999999999988999999999999999999999999998887654     5678


Q ss_pred             CCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccC
Q 013297          236 FSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQ  315 (446)
Q Consensus       236 ~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~  315 (446)
                      ++++|||+++|||||.+|+++++++|.++++...........++.++++.+++.++.+.+++++|.+....++.|..+++
T Consensus       242 ~~~~d~d~~v~Hqp~~r~~~k~~~rL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e  321 (460)
T 2wya_A          242 FTLDDLQYMIFHTPFCKMVQKSLARLMFNDFLSASSDTQTSLYKGLEAFGGLKLEDTYTNKDLDKALLKASQDMFDKKTK  321 (460)
T ss_dssp             CCGGGCSEEEECCSSHHHHHHHHHHHHHHHHHHSCHHHHHHHCGGGGGGTTCCGGGGGTCHHHHHHHHHHHHHHHHHHTG
T ss_pred             CCHHHHhhhhhcccchHHHHHHHHHhcchhhhhcccchhhhhhhhhhhhcCCchhhhhhhhHHHHHHHHHHHHHhhcchh
Confidence            99999999999999999999999999998887655444444455667777999999999999999999999999999999


Q ss_pred             CCccccccccccccchHHHHHHHHHHhc-CCCCCCCEEEEEEeccccceeeEEEEEeCCCCC-CChh-hHhhhccHHHHh
Q 013297          316 PSTLIPKQVGNMYTASLYAALASLIHNK-HSELDGKRVVLFSYGSGLTATMFSLKLSEGHHP-FSLS-NILSVMNVAGKL  392 (446)
Q Consensus       316 ~s~~~~~~~GN~~saS~~l~L~~~l~~~-~~~~~G~~vll~syGsG~~~~~~~l~~~~~~~~-~~~~-~~~~~~~~~~~L  392 (446)
                      |++.+.+++|||||||+|++|++++++. +++++||||+|+|||||+++++|+++++++..+ ...+ .+.+.+++.++|
T Consensus       322 ~~~~~~~~~GNt~sASiplaL~~ll~~~~~~~~~GdrIll~~fGSGl~s~~fs~~v~~~~~~~~~~~~~~~~~~~~~~~L  401 (460)
T 2wya_A          322 ASLYLSTHNGNMYTSSLYGCLASLLSHHSAQELAGSRIGAFSYGSGLAASFFSFRVSQDAAPGSPLDKLVSSTSDLPKRL  401 (460)
T ss_dssp             GGGHHHHHHCCCGGGHHHHHHHHHHHHSCHHHHTTCEEEEEEEETTTEEEEEEEEECSCCSTTSHHHHHHHTTTTHHHHH
T ss_pred             hhhhHHHhhCCcchhhHHHHHHHHHHhccccCCCCCEEEEEEecCCccceEEEEEEeCCccccchHHHHHHHhhhHHHHH
Confidence            9999999999999999999999999862 234689999999999999999999999984221 1122 256678999999


Q ss_pred             ccccccc-HHHHHHHHhhhhcceeeeecccCCchhhhh
Q 013297          393 KSRHEVI-LHFLQMCFVRYYVFFYIILTRLSGISHCIQ  429 (446)
Q Consensus       393 ~~R~~~~-~ey~~~~~~r~~~~~~~~~~~~~~~~~~~~  429 (446)
                      ++|++++ +||+++++.|++.+... ++.|+|....+.
T Consensus       402 ~~R~~~s~~~y~~~~~~r~~~~~~~-~~~~~~~~~~~~  438 (460)
T 2wya_A          402 ASRKCVSPEEFTEIMNQREQFYHKV-NFSPPGDTNSLF  438 (460)
T ss_dssp             HTSEEECHHHHHHHHHHHHHHTTCC-SBCCCSCGGGSC
T ss_pred             hcCccCCHHHHHHHHHHHHHhccCC-CCCCCCcccccC
Confidence            9999999 99999999999999886 999999765544

>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}

Probab=100.00  E-value=2.5e-75  Score=609.22  Aligned_cols=422  Identities=50%  Similarity=0.854  Sum_probs=382.7

Q ss_pred             CceeEEeEEEEecCCccccHHHHHHhcCCCcceeEEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEE
Q 013297            2 AKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVG   81 (446)
Q Consensus         2 ~~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~   81 (446)
                      ||+|||.+|++|+|+++|+++++++..|++++||..|+|+++++++.++|++.+||++|++++|+++|+++++||+||++
T Consensus        22 ~~~vgI~aig~y~P~~~v~~~el~~~~g~~~~~~~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~li~~  101 (478)
T 2p8u_A           22 SMDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQAKMGFCTDREDINSLCMTVVQNLMERNNLSYDCIGRLEVG  101 (478)
T ss_dssp             HHCCEEEEEEEECCSEEEEHHHHHHHHTCCTTCCCCCCCCCEEECCCTTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEE
T ss_pred             CCceEEEEEEEECCCeEecHHHHHHHhCCChhHhecccCceEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence            47899999999999999999999999999999998888988888888999999999999999999999999999999999


Q ss_pred             eccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCccCCCCCCcccc
Q 013297           82 SETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGG  161 (446)
Q Consensus        82 T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~~~~~~~t~G  161 (446)
                      |+|+++..|+++++|++.|+++|.++++++|+++||+||++||++|..||++|.||+++||||++|++.|.++++++|||
T Consensus       102 T~t~~~~~ps~a~~v~~~L~~lG~~~~~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~~~aLVV~~Eia~~~~~~~~~~fG  181 (478)
T 2p8u_A          102 TETIIDKSKSVKTNLMQLFEESGNTDIEGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDIAVYATGNARPTGG  181 (478)
T ss_dssp             CSCCSCSSSCHHHHHGGGTTTTTCCCCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEECCCSSTTGGGCE
T ss_pred             ccCCcccCccHHHHHHHHHhhcCCCCceEEEEcchhHHHHHHHHHHHHHHHcCCccCCEEEEEEeeeecccCCCCCCccc
Confidence            99999999999999998888766788999999999999999999999999999754799999999999898888899999


Q ss_pred             ccceeeeeccCCCcccccccccccccccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhh-----hCCCC
Q 013297          162 AAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKL-----EGKQF  236 (446)
Q Consensus       162 dGAvA~Ll~~~~~~~~~~~~~g~~~~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~-----~~~~~  236 (446)
                      |||+||||++++++.++.+..++++.+.+|||+|.++++||.+||++++.+|+.+++.+++.+.+++.+.     .++++
T Consensus       182 dGA~A~Ll~~~~~~~l~~~~~gs~~~~~~d~~~p~~~~~~~~~dG~~s~~~y~~a~~~~~~~~~~~l~~~~~~~~~~~g~  261 (478)
T 2p8u_A          182 VGAVALLIGPNAPLIFERGLRGTHMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYCKKIHAQWQKEGNDKDF  261 (478)
T ss_dssp             EEEEEEEEESSCSEEECTTCCEEEECCCCSEECCCTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred             ceeEEEEEecCCCceEeeccceecccchhheeeecCCCcceEEcCcchHHHHHHHHHHHHHHHHHHHhhhccccccccCC
Confidence            9999999999987555554577888889999999988899999999999999999999988887776422     15688


Q ss_pred             CcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCC
Q 013297          237 SLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQP  316 (446)
Q Consensus       237 ~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~  316 (446)
                      +++|||+|+|||||.+|++++.++|.+++|...+...++..|+++.++..++.+++|.||++||++...+++.|++|++|
T Consensus       262 ~~~did~~v~H~~~~ki~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ek~~~~~~~~~~~~k~~~  341 (478)
T 2p8u_A          262 TLNDFGFMIFHSPYCKLVQKSLARMLLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDRDVEKAFMKASSELFSQKTKA  341 (478)
T ss_dssp             CGGGCSEEEECCSSHHHHHHHHHHHHHHHHHHCTTGGGSGGGTTCGGGTTCCGGGCTTCHHHHHHHHHHTHHHHHHHTTG
T ss_pred             ChHHcCEEEecCCcHHHHHHHHHHhCcccccccccccccccccccchhccCChhhcccchhHHHHHHHHhHHHHHHhHHH
Confidence            99999999999999999999999998888876655444556777777888999999999999999999999999999999


Q ss_pred             CccccccccccccchHHHHHHHHHHhcCC--CCCCCEEEEEEeccccceeeEEEEEeCCCC-CCChhhHhhhc-cHHHHh
Q 013297          317 STLIPKQVGNMYTASLYAALASLIHNKHS--ELDGKRVVLFSYGSGLTATMFSLKLSEGHH-PFSLSNILSVM-NVAGKL  392 (446)
Q Consensus       317 s~~~~~~~GN~~saS~~l~L~~~l~~~~~--~~~G~~vll~syGsG~~~~~~~l~~~~~~~-~~~~~~~~~~~-~~~~~L  392 (446)
                      ++.+.+++|||||||+|++|++++++ ++  +++|++|+|+|||||+++++++++|+++.. ++.+++++++. ++.++|
T Consensus       342 ~~~~~~~~GN~~saSi~l~L~~ll~~-~~~~~~~Gdrill~s~GsG~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L  420 (478)
T 2p8u_A          342 SLLVSNQNGNMYTSSVYGSLASVLAQ-YSPQQLAGKRIGVFSYGSGLAATLYSLKVTQDATPGSALDKITASLCDLKSRL  420 (478)
T ss_dssp             GGHHHHHHCCCGGGHHHHHHHHHHHH-SCHHHHTTCEEEEEEEETTTEEEEEEEEECSCCCTTSHHHHHHHTTTTHHHHH
T ss_pred             HHHHHHhcCchHHHHHHHHHHHHHHh-CCccCCCCCEEEEEEEcchhhhEEEEEEEeCCCCcchhHHHHHHHHHHHHHHH
Confidence            99999999999999999999999998 66  679999999999999999999999998422 34499999998 999999


Q ss_pred             ccccccc-HHHHHHHHhhhhcceeeeecccCCch
Q 013297          393 KSRHEVI-LHFLQMCFVRYYVFFYIILTRLSGIS  425 (446)
Q Consensus       393 ~~R~~~~-~ey~~~~~~r~~~~~~~~~~~~~~~~  425 (446)
                      ++|+.++ ++|+++++.|++.+... ++.|.|..
T Consensus       421 ~~r~~~~~~~y~~~~~~~~~~~~~~-~~~~~~~~  453 (478)
T 2p8u_A          421 DSRTGVAPDVFAENMKLREDTHHLV-NYIPQGSI  453 (478)
T ss_dssp             HTSEECCHHHHHHHHHHHHHHTTCC-SBCCCSCS
T ss_pred             hCCccCCHHHHHHHHHhhHhhcCCC-CCCCCCCc
Confidence            9999999 99999999999999655 89998853

>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*

Probab=100.00  E-value=4.9e-74  Score=596.73  Aligned_cols=421  Identities=81%  Similarity=1.242  Sum_probs=383.9

Q ss_pred             CceeEEeEEEEecCCccccHHHHHHhcCCCcceeEEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEE
Q 013297            2 AKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVG   81 (446)
Q Consensus         2 ~~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~   81 (446)
                      |++|||.+|++|+|+++|+++++++..|.+++||++|+|++++++++++|++.+||++|++++|+++|+++++||.||++
T Consensus         1 ~~~v~I~~ig~y~P~~~v~~~~l~~~~g~~~~~~~~g~G~~~~~~~~~~e~~~~La~~Aa~~aL~~agi~~~~Id~li~~   80 (450)
T 2f82_A            1 AKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQDCLAFCTELEDVISMSFNAVTSLLEKYKIDPKQIGRLEVG   80 (450)
T ss_dssp             CCSCEEEEEEEECCSEEEEHHHHHHHTTCCTTTTTTTSCCCEEECCCTTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEE
T ss_pred             CCceEEEEEEEECCCeeccHHHHHHHhCCCHHHhhhhhCceeeeeCCCCCCHHHHHHHHHHHHHHHcCcCHHHCCEEEEE
Confidence            78999999999999999999999999999999998899999999988999999999999999999999999999999999


Q ss_pred             eccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCccCCCCCCcccc
Q 013297           82 SETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGG  161 (446)
Q Consensus        82 T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~~~~~~~t~G  161 (446)
                      |+++++..|+++.+|++.||++|+++++++|+++||+||+.||.+|.++|++|.+|+++||||++|++.|.+...+++||
T Consensus        81 t~t~~~~~p~~a~~v~~~lgl~g~~~~~~~~v~~aC~gg~~AL~~A~~~I~sg~~~~~~vLVvg~e~~~~~~~~~~~~fG  160 (450)
T 2f82_A           81 SETVIDKSKSIKTFLMQLFEKCGNTDVEGVDSTNACYGGTAALLNCVNWVESNSWDGRYGLVICTDSAVYAEGPARPTGG  160 (450)
T ss_dssp             CCCCSCSSSCHHHHHTHHHHTTTCCCCBCCEECSGGGHHHHHHHHHHHHHHSTTCCSCEEEEEEEEEECCSSSTTGGGCE
T ss_pred             ecCCCCCCCcHHHHHHHHhCCcCCCCceEEEhhhhhHHHHHHHHHHHHHHHcCCCcCCeEEEEEeeeccccCCCCCcccc
Confidence            99999999999999999999866678999999999999999999999999999766799999999999887767889999


Q ss_pred             ccceeeeeccCCCcccccccccccccccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCC
Q 013297          162 AAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNA  241 (446)
Q Consensus       162 dGAvA~Ll~~~~~~~~~~~~~g~~~~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~di  241 (446)
                      |||+||||++++++.++.+..++++.+.+|||+|.++++||.++|++++.+|++.++++++.+++++.+.++++++++||
T Consensus       161 DGA~A~ll~~~~~~~~~~~~~g~~~~~~~d~~~p~~~~~~~~~~G~~~~~~~~~~l~~~~~~~l~~~~~~~~agl~~~di  240 (450)
T 2f82_A          161 AAAIAMLIGPDAPIVFESKLRGSHMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKLEGKEFSINDA  240 (450)
T ss_dssp             EEEEEEEEESSCSEEEEEEEEEEEECCCCSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCGGGC
T ss_pred             cceEEEEeccCCceEEEeccceeehhhccceeeeCCCCCceeecCccHHHHHHHHHHHHHHHHHHHhhhccccCCChhhc
Confidence            99999999998765444445677888889999998778899999999999999999999999998764322568999999


Q ss_pred             ceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcccc
Q 013297          242 DYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIP  321 (446)
Q Consensus       242 d~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~  321 (446)
                      |+|++||+|.+|++++.++|.+++|...++...+..|+++.++..++.+++|.||++||++.+++++.|++|+.||+.+.
T Consensus       241 d~~v~Hq~~~~i~~~~~~~L~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ek~~~~~~~~~~~~k~~~s~~~~  320 (450)
T 2f82_A          241 DYFVFHSPYNKLVQKSFARLLYNDFLRNASSIDEAAKEKFTPYSSLSLDESYQSRDLEKVSQQLAKTYYDAKVQPTTLVP  320 (450)
T ss_dssp             SEEEECCSSHHHHHHHHHHHHHHHHHTTCTTCCHHHHHHHGGGTTCCHHHHHTCHHHHHHHHHHHHHHHHHHTGGGCHHH
T ss_pred             CEEEecCChHHHHHHHHHHhcccccccccccccccccccccccccccccccccchhHHHHHhhhhHHHHHHhhhHHHHHH
Confidence            99999999999999999999888887766555555667777777899999999999999999999999999999999999


Q ss_pred             ccccccccchHHHHHHHHHHhcCC-CCCCCEEEEEEeccccceeeEEEEEeCCCCCCChhhHhhhccHHHHhccccccc-
Q 013297          322 KQVGNMYTASLYAALASLIHNKHS-ELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEVI-  399 (446)
Q Consensus       322 ~~~GN~~saS~~l~L~~~l~~~~~-~~~G~~vll~syGsG~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~R~~~~-  399 (446)
                      +++|||||||+|++|++++++ ++ +++|++|+|+|||+|+++++++++|+++..++.++++++++++.++|++|++++ 
T Consensus       321 ~~~GN~~saSi~l~L~~~l~~-~~~~~~Gd~ill~s~GsG~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~  399 (450)
T 2f82_A          321 KQVGNMYTASLYAAFASLVHN-KHSDLAGKRVVMFSYGSGSTATMFSLRLCENQSPFSLSNIASVMDVGGKLKARHEYAP  399 (450)
T ss_dssp             HHHCCCGGGHHHHHHHHHHHH-HGGGCTTCEEEEEEEETTTEEEEEEEEECCCCTTSSHHHHHHHHCHHHHHHTCEECCH
T ss_pred             HhcCchHHHHHHHHHHHHHHh-CccCCCCCEEEEEeecCCcccEEEEEEEeCCCcchhHHHHHHhccHHHHHhCCccCCH
Confidence            999999999999999999998 54 679999999999999999999999998544555999999999999999999999 


Q ss_pred             HHHHHHHHhhhhcceeeeecccCCc
Q 013297          400 LHFLQMCFVRYYVFFYIILTRLSGI  424 (446)
Q Consensus       400 ~ey~~~~~~r~~~~~~~~~~~~~~~  424 (446)
                      ++|+++++.|++.+... ++.|.|.
T Consensus       400 ~~y~~~~~~~~~~~~~~-~~~~~~~  423 (450)
T 2f82_A          400 EKFVETMKLMEHRYGAK-EFVTSKE  423 (450)
T ss_dssp             HHHHHHHHHHHHHTTCC-SEECCCT
T ss_pred             HHHHHHHHHhHhhcCCC-CCCCCCc
Confidence            99999999999998654 8899886

>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A*

Probab=100.00  E-value=1e-64  Score=516.74  Aligned_cols=352  Identities=29%  Similarity=0.457  Sum_probs=307.4

Q ss_pred             CCceeEEeEEEEecCCccccHHHHHHhcCCCcceeEEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEE
Q 013297            1 MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEV   80 (446)
Q Consensus         1 ~~~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~   80 (446)
                      |.|+|+|.++++|+|+++|+++++++..|.+++|+..|+|++++++++++|++.+||++|++++|++++  +++||+||+
T Consensus         4 ~~m~v~I~~~g~y~P~~~v~~~~l~~~~g~~~~~~~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~a~--~~~Id~li~   81 (388)
T 3v4n_A            4 GSMTIGIDKISFFVPPYYIDMTALAEARNVDPGKFHIGIGQDQMAVNPISQDIVTFAANAAEAILTKED--KEAIDMVIV   81 (388)
T ss_dssp             SSCCEEEEEEEEECCSEEEEHHHHHHHTTSCTHHHHTTTCCCEEECCCTTCCHHHHHHHHHHTTCCHHH--HHHEEEEEE
T ss_pred             CceeEEEEEEEEECCCeEEcHHHHHHHhCCCHHHHHHHhCceEEEECCCCCCHHHHHHHHHHHHHHhCC--cccCCEEEE
Confidence            468999999999999999999999999999999998888888888989999999999999999999986  899999999


Q ss_pred             EeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCccC-CCCCCcc
Q 013297           81 GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYA-EGPARPT  159 (446)
Q Consensus        81 ~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~-~~~~~~t  159 (446)
                      +|+|+++..|+++.+|+++||+  .++++++|+++||+|++.||.+|..+|++|.  .++||||++|++++. +++++++
T Consensus        82 ~t~t~~~~~ps~a~~v~~~LGl--~~~~~~~dv~~aC~gg~~AL~~A~~~i~sg~--~~~vLVvg~e~~s~~~~~~~~~l  157 (388)
T 3v4n_A           82 GTESSIDESKAAAVVLHRLMGI--QPFARSFEIKEAXYGATAGLQLAKNHVALHP--DKKVLVVAADIAKYGLNSGGEPT  157 (388)
T ss_dssp             ECSSCSBSSSCHHHHHHHHTTC--CSSCEEEEEESGGGHHHHHHHHHHHHHHHCT--TCEEEEEEEEEECCCTTCTTGGG
T ss_pred             EeccCCCcCccHHHHHHHHcCC--CCCceEeehhhhhhHHHHHHHHHHHHHhcCC--CCEEEEEEehhhcccCCCCCCCc
Confidence            9999999999999999999998  5569999999999999999999999999995  499999999999764 4567899


Q ss_pred             ccccceeeeeccCCCc-ccccccccccccccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCc
Q 013297          160 GGAAAVVMLVGPDAPV-AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSL  238 (446)
Q Consensus       160 ~GdGAvA~Ll~~~~~~-~~~~~~~g~~~~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~  238 (446)
                      |||||+||||++++++ .+... ...++.+.+|||+|. +..++.++|++++++|++.+++++++++++.      ++++
T Consensus       158 fGDGA~A~ll~~~~~il~~~~~-~~~~~~~~~df~~p~-~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~------g~~~  229 (388)
T 3v4n_A          158 QGAGAVAMLVSSEPRILALKED-NVMLTQDIYDFWRPT-GHPYPMVDGPLSNETYIQSFAQVWDEHKKRT------GLDF  229 (388)
T ss_dssp             CEEEEEEEEEEESCSSEEECSC-CEEEECCCCSEECBT-TCSSCEECHHHHHHHHHHHHHHHHHHHHHHH------CCCG
T ss_pred             cccceeEEEeecCCCceEEecc-ccccchhccccccCC-CCCCceeccHhHHHHHHHHHHHHHHHHHHHh------CCCH
Confidence            9999999999999864 44432 344567889999998 4678999999999999999999999999987      7999


Q ss_pred             CCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCc
Q 013297          239 SNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPST  318 (446)
Q Consensus       239 ~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~  318 (446)
                      +|||+|+|||||.||++|+.++++..                       ..+.      +        ++.+.-..++++
T Consensus       230 ~did~~v~Hqp~~k~~~ka~~ril~~-----------------------~~~~------~--------~~~l~~~~e~~~  272 (388)
T 3v4n_A          230 ADYDALAFHIPYTKMGKKALLAKISD-----------------------QTEA------E--------QERILARYEESI  272 (388)
T ss_dssp             GGCSEEEECCSSHHHHHHHHHHHSTT-----------------------SCHH------H--------HHHHHHHHHHHT
T ss_pred             HHCCEEEeCCCcchHHHHHHHHHHhc-----------------------ccHH------H--------HHHhCCCHHHHh
Confidence            99999999999999999998877421                       0000      0        111111122234


Q ss_pred             cccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEEeCCCCCCChhhHhhhccHHHHhcccccc
Q 013297          319 LIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEV  398 (446)
Q Consensus       319 ~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~R~~~  398 (446)
                      .+.+++|||||||+|++|++++++.+++++||+|+|+|||+|+++++|++++++     ++++++++.++.++|++|+++
T Consensus       273 ~~~~~~GN~~sASi~l~L~~~l~~~g~~~~Gd~ill~s~GsG~~ae~~~~~v~~-----~~~~~~~~~~~~~~l~~r~~~  347 (388)
T 3v4n_A          273 IYSRRVGNLYTGSLYLGLISLLENATTLTAGNQIGLFSYGSGAVAEFFTGELVA-----GYQNHLQKETHLALLDNRTEL  347 (388)
T ss_dssp             TTGGGTCCCGGGHHHHHHHHHHHHCSSCCTTCEEEEEEEETTTEEEEEEEEECT-----TGGGSCCHHHHHHHHHTCEEC
T ss_pred             hHHHhcCchHHHHHHHHHHHHHHhcCcCCCCCEEEEEEecCcceeEEEEEEEcc-----CHHHHHHhhhHHHHHhCCccC
Confidence            455999999999999999999997446789999999999999999999999999     899988888999999999999


Q ss_pred             c-HHHHHHHHh
Q 013297          399 I-LHFLQMCFV  408 (446)
Q Consensus       399 ~-~ey~~~~~~  408 (446)
                      + ++|+++++.
T Consensus       348 ~~~~y~~~~~~  358 (388)
T 3v4n_A          348 SIAEYEAMFAE  358 (388)
T ss_dssp             CHHHHHHHHHC
T ss_pred             CHHHHHHHHhc
Confidence            9 999999975

>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*

Probab=100.00  E-value=2e-61  Score=494.67  Aligned_cols=355  Identities=26%  Similarity=0.433  Sum_probs=316.9

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhcCCCcceeEEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEe
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGS   82 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T   82 (446)
                      |+++|.++++|+|+++++++++++..|.+++||..++|++++++++++|++.+|+++|++++|++  +++++||.||++|
T Consensus         1 m~v~I~~ig~y~P~~~v~~~~l~~~~~~~~~~i~~~~Gi~~r~~~~~~e~~~~la~~Aa~~aL~~--~~~~~Id~li~~t   78 (396)
T 1xpm_A            1 MAIGIDKINFYVPKYYVDMAKLAEARQVDPNKFLIGIGQTEMAVSPVNQDIVSMGANAAKDIITD--EDKKKIGMVIVAT   78 (396)
T ss_dssp             -CEEEEEEEEECCSEEEEHHHHHHHTTSCHHHHHTTTCCSEEEECCTTCCHHHHHHHHHHTTCCH--HHHHHEEEEEEEC
T ss_pred             CceEEEEEEEeCCCeEecHHHHHHHhCCCHHHHhhhcCceEEEeCCCCCCHHHHHHHHHHHHHhc--CCHHHCCEEEEEe
Confidence            57999999999999999999999999999999976677766678889999999999999999988  7899999999999


Q ss_pred             ccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCccC-CCCCCcccc
Q 013297           83 ETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYA-EGPARPTGG  161 (446)
Q Consensus        83 ~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~-~~~~~~t~G  161 (446)
                      +++++..|+++.+|+.+||+  .++++++++++||+|++.||..|.++|++|..  ++||||++|...+. +++.+++||
T Consensus        79 ~~~~~~~p~~a~~v~~~lGl--~~~~~~~~v~~aC~sg~~Al~~A~~~I~sg~~--~~vLvvg~e~s~~~~~~~~~~~~G  154 (396)
T 1xpm_A           79 ESAVDAAKAAAVQIHNLLGI--QPFARCFEMKEACYAATPAIQLAKDYLATRPN--EKVLVIATDTARYGLNSGGEPTQG  154 (396)
T ss_dssp             SSCSBSSSCHHHHHHHHTTC--CSSCEEEEEESTTTTHHHHHHHHHHHHTTCTT--CEEEEEEEEEECCCTTCSSGGGCE
T ss_pred             CCCCCCCCCHHHHHHHHhCC--CCCceEEEeccccHHHHHHHHHHHHHHHcCCC--CEEEEEeehhhccccCCCCCcccc
Confidence            99999999999999999998  55799999999999999999999999999954  99999999987663 445689999


Q ss_pred             ccceeeeeccCCCc-ccccccccccccccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCC
Q 013297          162 AAAVVMLVGPDAPV-AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSN  240 (446)
Q Consensus       162 dGAvA~Ll~~~~~~-~~~~~~~g~~~~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~d  240 (446)
                      |||+||||++++.+ .+..+ .++++.+.++||+|... .++.++|+.++++|++.+.++++.++++.      +++++|
T Consensus       155 dGA~A~vl~~~~~i~~~~~~-~g~~~~d~~~~~~p~~~-~~~~~~G~~~~~~~~~~~~~~~~~~L~~a------gl~~~d  226 (396)
T 1xpm_A          155 AGAVAMVIAHNPSILALNED-AVAYTEDVYDFWRPTGH-KYPLVDGALSKDAYIRSFQQSWNEYAKRQ------GKSLAD  226 (396)
T ss_dssp             EEEEEEEEEESCSSEEECSC-CEEEECCCCSEECBTTC-SSCEECHHHHHHHHHHHHHHHHHHHHHHH------TCCGGG
T ss_pred             cceEEEEeccCCceEEEEec-cccccceEEEeeccCCC-CCeEEEcHHHHHHHHHHHHHHHHHHHHHc------CCCHHH
Confidence            99999999998764 44444 67777788999999743 47888999999999999999999999987      799999


Q ss_pred             CceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccc
Q 013297          241 ADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLI  320 (446)
Q Consensus       241 id~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~  320 (446)
                      ||+|++||||.++++++.++|+.+.                                     ..+.++.|..+++||+.+
T Consensus       227 id~~~~H~~~~~~~~~~~~~l~~~~-------------------------------------~~~~~e~~~~~~~~s~~~  269 (396)
T 1xpm_A          227 FASLCFHVPFTKMGKKALESIIDNA-------------------------------------DETTQERLRSGYEDAVDY  269 (396)
T ss_dssp             CSEEEECCSSHHHHHHHHHTTGGGS-------------------------------------CHHHHHHHHHHHHHHTTG
T ss_pred             CCEEEecCCchHHHHHHHHHHHhhc-------------------------------------ccCCHHHHHHHhhhhhhh
Confidence            9999999999999999998874110                                     012344566778999999


Q ss_pred             cccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEEeCCCCCCChhhHhhhccHHHHhccccccc-
Q 013297          321 PKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEVI-  399 (446)
Q Consensus       321 ~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~R~~~~-  399 (446)
                      .+++|||||||+|++|++++++ +++++||+|+|+|||+|+++++|+++|++     ++++++++.++.++|++|+.++ 
T Consensus       270 ~~~~GN~~saSi~l~L~~~l~~-~~l~~Gd~ill~s~GsG~~~~~~~~~v~~-----~~~~~~~~~~~~~~l~~r~~~~~  343 (396)
T 1xpm_A          270 NRYVGNIYTGSLYLSLISLLEN-RDLQAGETIGLFSYGSGSVGEFYSATLVE-----GYKDHLDQAAHKALLNNRTEVSV  343 (396)
T ss_dssp             GGGTCCCGGGHHHHHHHHHHHH-SCCCTTCEEEEEEEETTTEEEEEEEEECT-----TGGGGCCHHHHHHHHHTCEECCH
T ss_pred             hhhcCchHHHHHHHHHHHHHHc-CCCCCCCEEEEEEECcchhheEEEEEEcc-----cHHHHhhcccHHHHHhCCccCCH
Confidence            9999999999999999999998 78889999999999999999999999999     7999888889999999999999 


Q ss_pred             HHHHHHHHhhhhcce
Q 013297          400 LHFLQMCFVRYYVFF  414 (446)
Q Consensus       400 ~ey~~~~~~r~~~~~  414 (446)
                      ++|+++++.|+++.+
T Consensus       344 ~~y~~~~~~~~~~~~  358 (396)
T 1xpm_A          344 DAYETFFKRFDDVEF  358 (396)
T ss_dssp             HHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHhhhhccc
Confidence            999999999998876

>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}

Probab=100.00  E-value=2.4e-52  Score=420.71  Aligned_cols=308  Identities=17%  Similarity=0.172  Sum_probs=254.9

Q ss_pred             CceeEEeEEEEecCCccccHHHHHHhcCCCccee--EEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEE
Q 013297            2 AKNVGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLE   79 (446)
Q Consensus         2 ~~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li   79 (446)
                      |....|.++|.|+|+++|+|+|+++..+.+++|+  ++||.+|++  +.++|++.+||++|+++||+++|++++|||+||
T Consensus        11 ~~~srI~g~g~ylP~~~v~n~el~~~~~~~~e~I~~rtGI~~R~~--a~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li   88 (350)
T 4ewp_A           11 PAASRIVAVGAYRPANLVPNEDLIGPIDSSDEWIRQRTGIVTRQR--ATAEETVPVMAVGAAREALERAGLQGSDLDAVI   88 (350)
T ss_dssp             CSEEEEEEEEEECCSCEEEHHHHTTTTTCCHHHHHHHHCCSEEEC--CCSSCCHHHHHHHHHHHHHHHTTCCGGGCSEEE
T ss_pred             CCCCEEEEEEEEcCCCeEcHHHHHHHhCCCHHHHHhccCceEEEE--cCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence            5678899999999999999999999999999988  479999985  488999999999999999999999999999999


Q ss_pred             EEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCcc-CCC---C
Q 013297           80 VGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AEG---P  155 (446)
Q Consensus        80 ~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~~---~  155 (446)
                      ++|+|+++..|+++++|+++||+   +++.+||+++||+|+++||++|..++++|..  ++||||++|.++. .++   .
T Consensus        89 ~~t~t~~~~~P~~a~~v~~~LGl---~~~~a~di~~~C~g~~~aL~~A~~~i~~g~~--~~~Lvv~~E~~s~~~d~~~~~  163 (350)
T 4ewp_A           89 VSTVTFPHATPSAAALVAHEIGA---TPAPAYDVSAACAGYCYGVAQADALVRSGTA--RHVLVVGVERLSDVVDPTDRS  163 (350)
T ss_dssp             EECSCCSCSSSCHHHHHHHHTTC---TTSCEEEEECGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEEEGGGGCCTTCTT
T ss_pred             EEeccCCCCCCchHHHHHHHhCC---CCceEEEeecchhhHHHHHHHhhhhhhCCCc--cceeEeeeeeceecccccccc
Confidence            99999999999999999999997   5667999999999999999999999999954  9999999999843 232   3


Q ss_pred             CCccccccceeeeeccCCCccccc---cccccccccc------------ccccccCC---------C--CCCcccCChhH
Q 013297          156 ARPTGGAAAVVMLVGPDAPVAFES---KLRGSHMSHA------------YDFYKPNL---------A--SEYPVVDGKLS  209 (446)
Q Consensus       156 ~~~t~GdGAvA~Ll~~~~~~~~~~---~~~g~~~~~~------------~df~~p~~---------~--~~~p~~dG~~s  209 (446)
                      ...+|||||+|+||++.+...+..   +..|......            .+.++..+         .  ..+..++|+..
T Consensus       164 ~~~lfgDGA~A~vl~~~~~~~~~~~~~~sdg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v  243 (350)
T 4ewp_A          164 ISFLLGDGAGAVIVAASDEPGISPSVWGSDGERWSTISMTHSQLELRDAVEHARTTGDASAITGAEGMLWPTLRQDGPSV  243 (350)
T ss_dssp             TGGGBCEEEEEEEEEEESSCCBCCCEEEECGGGTTSEEESSCHHHHHHHHHHHHHHSCCTTTTTCSSCSSCCEEECHHHH
T ss_pred             cccccccchheeeeecccCCCccceeeeecccccceeeecCCccccCcccccccccCCccccccccccccceeEehhHHH
Confidence            457899999999998865321111   1111111000            00010000         0  01234688877


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCC
Q 013297          210 QTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSG  289 (446)
Q Consensus       210 ~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~  289 (446)
                      ++...+.+++++++++++.      +++++|||+|++||++.++++.+.++|                        |+|.
T Consensus       244 ~~~a~~~~~~~i~~~L~~~------gl~~~did~~v~Hq~~~~i~~~~~~~L------------------------gl~~  293 (350)
T 4ewp_A          244 FRWAVWSMAKVAREALDAA------GVEPEDLAAFIPHQANMRIIDEFAKQL------------------------KLPE  293 (350)
T ss_dssp             HHHHHHTHHHHHHHHHHHH------TCCGGGEEEEEECCSCHHHHHHHHHHT------------------------TCCT
T ss_pred             HHHHHHhhhHHHHHHHHhh------cCChhHhceEEecCCCHHHHHHHHHHc------------------------CcCh
Confidence            7777788888999998887      899999999999999999999999988                        8887


Q ss_pred             CccccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEE
Q 013297          290 DESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLK  369 (446)
Q Consensus       290 e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~  369 (446)
                      ++.+.        .++                +++|||++||+|++|++++++ +++++||+|+|++||+|++|+++++|
T Consensus       294 ~~~~~--------~~l----------------~~~GNtssasi~~~L~~~~~~-g~~~~Gd~vll~~fG~G~t~~~~vlr  348 (350)
T 4ewp_A          294 SVVVA--------RDI----------------ADAGNTSAASIPLAMHRLLEE-NPELSGGLALQIGFGAGLVYGAQVVR  348 (350)
T ss_dssp             TSEEC--------CTH----------------HHHCBCGGGHHHHHHHHHHHH-CGGGTTSEEEEEEEETTTEEEEEEEE
T ss_pred             HhEEe--------ccc----------------ccccchHHHHHHHHHHHHHHh-CCCCCcCEEEEEEEchhhEeEEEEEE
Confidence            76542        123                799999999999999999999 88899999999999999999999999


Q ss_pred             Ee
Q 013297          370 LS  371 (446)
Q Consensus       370 ~~  371 (446)
                      |.
T Consensus       349 ~P  350 (350)
T 4ewp_A          349 LP  350 (350)
T ss_dssp             CC
T ss_pred             eC
Confidence            83

>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}

Probab=100.00  E-value=4.3e-50  Score=400.07  Aligned_cols=305  Identities=17%  Similarity=0.191  Sum_probs=256.5

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhcCCCcceeE--EeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEE
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYT--IGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEV   80 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~--~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~   80 (446)
                      |+..|.+++.|+|+++|+++++++..+.+++|+.  +|+.+|+  +++++|++.+|+++|++++|+++|+++++||.||+
T Consensus         8 ~~~~~~~~g~ylP~~~v~n~~l~~~~~~~~~~i~~~tGi~~R~--~a~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~   85 (323)
T 3il3_A            8 MNSRILSTGSYLPSHIRTNADLEKMVDTSDEWIVTRSGIRERR--IAAEDETVATMGFEAAKNAIEAAQINPQDIELIIV   85 (323)
T ss_dssp             CEECCCEEEEECCSCEEEHHHHHTTSSCCHHHHHHHTCCCEEE--CCCTTCCHHHHHHHHHHHHHHHHCCCGGGCCEEEE
T ss_pred             ccCceeEEEEECCCceEcHHHHHHHhCCCHHHHHHhcCCcEEE--ECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence            6789999999999999999999999999999984  6777766  55889999999999999999999999999999999


Q ss_pred             EeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCcc-CCCC---C
Q 013297           81 GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AEGP---A  156 (446)
Q Consensus        81 ~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~~~---~  156 (446)
                      +|+++++..|+++.+|+++||+   ++++++|++++|+|++.||.+|..+|++|..  ++||||++|..+. .++.   .
T Consensus        86 ~t~~~~~~~p~~a~~v~~~lGl---~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~--~~vLvvg~e~~s~~~~~~d~~~  160 (323)
T 3il3_A           86 ATTSHSHAYPSAACQVQGLLNI---DDAISFDLAAACTGFVYALSVADQFIRAGKV--KKALVIGSDLNSRKLDETDRST  160 (323)
T ss_dssp             ECSCCSCSSSCHHHHHHHHTTC---SSCEEEEECCGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEEEGGGSCCTTCTTT
T ss_pred             EeCCCCCCCccHHHHHHHHhCC---CCccEEEECCccHHHHHHHHHHHHHHHCCCC--CEEEEEEeeccccccCcccccc
Confidence            9999998899999999999997   5799999999999999999999999999965  9999999999853 2332   3


Q ss_pred             CccccccceeeeeccCCCcccccccccccccccccccccC-----CCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhh
Q 013297          157 RPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPN-----LASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKL  231 (446)
Q Consensus       157 ~~t~GdGAvA~Ll~~~~~~~~~~~~~g~~~~~~~df~~p~-----~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~  231 (446)
                      ..+|||||+|+||++++...+......+........+.|.     ....+..++|+.+++.+.+.+++++++++++.   
T Consensus       161 ~~lfGDGA~A~vl~~~~~~~i~~~~~~s~g~~~~~~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~---  237 (323)
T 3il3_A          161 VVLFGDGAGAVILEASEQEGIISTHLHASADKNNALVLAQPERGIEKSGYIEMQGNETFKLAVRELSNVVEETLLAN---  237 (323)
T ss_dssp             TTTBCEEEEEEEEEEESSCCEEEEEEEECCCCSCSEECCCCCTTCSSCSCCEECHHHHHHHHHHHHHHHHHHHHHTT---
T ss_pred             ccccccceEEEEEEEcCCCCeEEEEEEEcCCCcceEEECCCCCCCCCCCcEEEcCHHHHHHHHHHHHHHHHHHHHHc---
Confidence            4679999999999986531111001111111111122332     12234567899998889999999999888876   


Q ss_pred             hCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhh
Q 013297          232 EGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYD  311 (446)
Q Consensus       232 ~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~  311 (446)
                         +++++|||+|++||+|.++++.+.++|                        |++.++++.         ++      
T Consensus       238 ---gl~~~did~~v~Hq~~~~i~~~~~~~l------------------------gl~~ek~~~---------~l------  275 (323)
T 3il3_A          238 ---NLDKKDLDWLVPHQANLRIITATAKKL------------------------EMDMSQVVV---------TL------  275 (323)
T ss_dssp             ---TCCTTTCCEEEECCSCHHHHHHHHHHT------------------------TCCGGGBCC---------CH------
T ss_pred             ---CCCHHHCCEEEEcCCCHHHHHHHHHHc------------------------CcCHHHhhc---------cH------
Confidence               899999999999999999999999988                        888877653         33      


Q ss_pred             hccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEE
Q 013297          312 AKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKL  370 (446)
Q Consensus       312 ~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~  370 (446)
                                +++||+++||+|++|.+++++ +++++||+|+|++||+|++|++++++|
T Consensus       276 ----------~~~GNt~sasi~~~L~~~~~~-g~~~~Gd~vll~~~G~G~t~~~~~l~~  323 (323)
T 3il3_A          276 ----------DKYANNSAATVPVALDEAIRD-GRIQRGQLLLLEAFGGGWTWGSALVRF  323 (323)
T ss_dssp             ----------HHHCBCGGGHHHHHHHHHHHT-TSSCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred             ----------hhcCchHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEehhheeEEEEEEC
Confidence                      799999999999999999998 889999999999999999999999987

>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A

Probab=100.00  E-value=5.5e-48  Score=391.05  Aligned_cols=306  Identities=15%  Similarity=0.137  Sum_probs=254.7

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhc-CCCccee--EEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEE
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHD-GASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLE   79 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~-g~~~~k~--~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li   79 (446)
                      ++++|.+++.|+|+++|+|+++++.. +.+.+|+  ++||.+|++  +.++|+..+|+++|++++|+++|+++++||.||
T Consensus        29 ~~v~I~gig~~lP~~~v~n~~l~~~~~~~~~~~i~~~tGI~~R~~--a~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi  106 (365)
T 3gwa_A           29 PRAAIADIAGHLPEQVLTNDVLAQLYPDWPAEKILAKTGIRERRI--AAPRETAADLAYEAARKLFAQGAVGADQVDFVI  106 (365)
T ss_dssp             CEEEEEEEEEECCSEEEEHHHHHHHCTTCCHHHHHHHHCCCEEEE--CCTTCCHHHHHHHHHHHHHHTTSCCGGGCCEEE
T ss_pred             ccEEEEEEEEeCCCcEEcHHHHHHHccCCCHHHHHHhcCccEEEE--CCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence            57999999999999999999999988 6777887  478888874  478999999999999999999999999999999


Q ss_pred             EEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCcc-CCCCC--
Q 013297           80 VGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AEGPA--  156 (446)
Q Consensus        80 ~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~~~~--  156 (446)
                      ++|+++++..|+++.+|+++||+  .+++++++++++|+|++.||.+|..+|++|..  ++||||++|..+. .++.+  
T Consensus       107 ~~t~~~~~~~p~~a~~v~~~lGl--~~~~~~~~v~~~C~s~~~Al~~A~~~i~~g~~--~~vLvvg~e~~s~~~~~~dr~  182 (365)
T 3gwa_A          107 LCTQAPDYVLPTSACMLQHRLGI--PTHAGALDVNLGCSGYVYGLSLAKGLVETGAA--RCVLLLTADTYSKYLHPLDKS  182 (365)
T ss_dssp             EEESSCSCSBSCHHHHHHHHTTC--CTTSEEEEEECSTTHHHHHHHHHHHHHHTTSC--SEEEEEEEECGGGGSCTTCHH
T ss_pred             EEeCCCCCCCCcHHHHHHHHcCC--CCCceEEEecccChHHHHHHHHHHHHHHcCCC--CEEEEEEEchhhccCCccccc
Confidence            99999988899999999999998  45899999999999999999999999999965  9999999999853 23333  


Q ss_pred             -CccccccceeeeeccCCCc--ccccccccccccccccccccCCC----------------------CCCcccCChhHHH
Q 013297          157 -RPTGGAAAVVMLVGPDAPV--AFESKLRGSHMSHAYDFYKPNLA----------------------SEYPVVDGKLSQT  211 (446)
Q Consensus       157 -~~t~GdGAvA~Ll~~~~~~--~~~~~~~g~~~~~~~df~~p~~~----------------------~~~p~~dG~~s~~  211 (446)
                       ..+|||||+|+||++++..  .+.....++........+.|.++                      ..+..++|+..++
T Consensus       183 ~~~lfGDGAaA~vl~~~~~~~~~i~~~~~~s~g~~~~~~~~~~gg~~~p~~~~~~~~~~~~~~~~~~~~~~~m~g~~v~~  262 (365)
T 3gwa_A          183 VRTLFGDGASATAVIAEHGELERIGPFVFGTDGRGAPNLIVKAGLFREPKSADSAREHEDASGNVRTDEHLYMNGAEVMA  262 (365)
T ss_dssp             HHTTBCCEEEEEEEEEECSSSCSEEEEEEEECGGGGGGEEECSSSSSSCCCTGGGCCEECTTSCEECTTSEEECHHHHHH
T ss_pred             ccccccceeEEEEEEecCCCCCceEEEEEEEcCCCCCeEEecCCCcCCCCcccccccccccccccccccceEeccHHHHH
Confidence             4679999999999987531  11110111111111111112111                      1234567777777


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCc
Q 013297          212 CYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDE  291 (446)
Q Consensus       212 ~yl~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~  291 (446)
                      ...+.+++++++++++.      +++++|||+|++||+|.++++.+.++|                        |++.++
T Consensus       263 ~~~~~~~~~i~~~L~~~------gl~~~did~~v~Hq~n~~i~~~~~~~L------------------------gl~~ek  312 (365)
T 3gwa_A          263 FSLAEVPRAADRLLALA------GEPRENIDCFVLHQANRFMLDALRKKM------------------------KIPEHK  312 (365)
T ss_dssp             HHHHHHHHHHHHHHHHH------TCCGGGCSEEEECCCCHHHHHHHHHHH------------------------TCCGGG
T ss_pred             HHHHHHHHHHHHHHHHc------CCCHHHCCEEEEcCCCHHHHHHHHHHh------------------------CCCHHH
Confidence            77888899999998887      899999999999999999999999998                        888877


Q ss_pred             cccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEE
Q 013297          292 SYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKL  370 (446)
Q Consensus       292 ~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~  370 (446)
                      ++.         ++                +++||+++||+|++|.+++++ +++++||+|+|++||+|++|++++++|
T Consensus       313 ~~~---------~l----------------~~~GNtssAsipl~L~~~~~~-g~~~~Gd~vll~~fG~G~t~~~~ll~~  365 (365)
T 3gwa_A          313 FPV---------LM----------------EHCGNTVSSTLPLALETMRAN-GTLARGMRLMLLGFGVGYSWAGCLVNF  365 (365)
T ss_dssp             SCC---------CC----------------TTTCBCGGGHHHHHHHHHHHT-TCCCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred             HHH---------HH----------------hcccchHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEehhheeEEEEEEC
Confidence            652         33                899999999999999999998 889999999999999999999999987

>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}

Probab=100.00  E-value=7.2e-49  Score=396.03  Aligned_cols=307  Identities=15%  Similarity=0.130  Sum_probs=255.3

Q ss_pred             eeEEeEEEEecCCccccHHHHHHhcCCCc-cee--EEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEE
Q 013297            4 NVGILAMDIYFPPTCVQQEALEAHDGASK-GKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEV   80 (446)
Q Consensus         4 ~vgI~~i~~y~P~~~v~~~~l~~~~g~~~-~k~--~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~   80 (446)
                      +++|.+++.|+|+++|+++++++..+.++ +|+  ++|+.+|+  ++.++|+..+|+++|++++|+++|+++++||.||+
T Consensus        16 ~v~I~~ig~~lP~~~v~n~~l~~~~~~~~~~~i~~~tGI~~R~--~a~~~~~~~~La~~Aa~~aL~~agi~~~~Id~vi~   93 (354)
T 4efi_A           16 GARIAGVVSCVPSKQVDNDYFVERFDASAVRDVVKMIGVNRRR--WADAQTSAGDLCRKAGEKLLAGLGWQADSIDALIF   93 (354)
T ss_dssp             SEEEEEEEEEECSCEEEGGGGTTTSCHHHHHHHHHHHCCSEEE--CCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEE
T ss_pred             ceEEEEEEEECCCcEEcHHHHHHHhCCCcHHHHHHhcCCeEEE--EcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence            69999999999999999999999877644 677  36888877  55789999999999999999999999999999999


Q ss_pred             EeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCcc-CCCCC---
Q 013297           81 GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AEGPA---  156 (446)
Q Consensus        81 ~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~~~~---  156 (446)
                      +|+++++..|+++.+|+++||+  ++++++++++++|+|++.||..|..+|++|..  ++||||++|..+. .++.+   
T Consensus        94 ~t~~~~~~~p~~a~~v~~~lGl--~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~--~~vLvvg~e~~s~~~~~~d~~~  169 (354)
T 4efi_A           94 VSQTPNYRLPATAFVLQAELDL--PASCLALDINLGCSGYPQALWLGMNLIQTGAA--KRVLLAVGDTISKMIDPTDRST  169 (354)
T ss_dssp             ECSSCSCSSSCHHHHHHHHTTC--CTTSEEEEECCCTTHHHHHHHHHHHHHHTTSC--SEEEEEEEECGGGGCCTTCHHH
T ss_pred             EeCCCCCCCCcHHHHHHHHcCc--CCCccEEeeCcccHHHHHHHHHHHHHHHCCCC--CEEEEEEechhcccCCcccccc
Confidence            9999999899999999999997  56899999999999999999999999999965  9999999999853 33333   


Q ss_pred             CccccccceeeeeccCCCcccccccccccccccccccccCCCC----------------CCcccCChhHHHHHHHHHHHH
Q 013297          157 RPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLAS----------------EYPVVDGKLSQTCYLMALDTC  220 (446)
Q Consensus       157 ~~t~GdGAvA~Ll~~~~~~~~~~~~~g~~~~~~~df~~p~~~~----------------~~p~~dG~~s~~~yl~~l~~~  220 (446)
                      ..+|||||+|+||++++...+......+.......++.|.++.                .+..++|+..++...+.++++
T Consensus       170 ~~lfGDGA~A~vl~~~~~~~~~~~~~~s~g~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~  249 (354)
T 4efi_A          170 SLLFGDAGTMTALETSNGDAAAHFIIGADGKGARNLIVPSGGFKPYDAAADERMAGKSPECLFMDGGEIFNFTLNAVPKL  249 (354)
T ss_dssp             HTTBCCEEEEEEEEECCSCCEEEEEEEECGGGGGGEECCSSSSSCCCGGGCGGGTTCCTTSCEECHHHHHHHHHHHHHHH
T ss_pred             ccccccceeEEEEeecCCCCceEEEEEEcCCCcceEEecCCCCCCCccccccccccccccceEEccHHHHHHHHHHHHHH
Confidence            3689999999999988642110001112221111233332111                134567777777777888999


Q ss_pred             HHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHH
Q 013297          221 YKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEK  300 (446)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k  300 (446)
                      +++++++.      +++++|||+|++||+|.++++.+.++|                        |++.++.+.      
T Consensus       250 i~~~l~~~------gl~~~did~~v~Hq~~~~i~~~~~~~L------------------------gl~~ek~~~------  293 (354)
T 4efi_A          250 VSRTLDIA------GRDKDSYDAFLFHQANLFMLKHLAKKA------------------------GLPAERVPV------  293 (354)
T ss_dssp             HHHHHHHH------TCCGGGCSEEEECCCCHHHHHHHHHHT------------------------TCCGGGSCC------
T ss_pred             HHHHHHHc------CCCHHHCCEEEeCCCCHHHHHHHHHHh------------------------CcCHHHHHH------
Confidence            99998887      799999999999999999999999988                        888877653      


Q ss_pred             HHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEEeC
Q 013297          301 VSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSE  372 (446)
Q Consensus       301 ~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~~~  372 (446)
                         ++                +++||+++||+|++|++++++ +++++||+|+|++||+|++|++++++|.+
T Consensus       294 ---~l----------------~~~GNt~sasi~~~L~~~~~~-g~~~~Gd~vll~~fG~G~t~~~~ll~~~~  345 (354)
T 4efi_A          294 ---NI----------------GEYGNTSCASIPLLITTELKD-RLKEETLQLGMFGFGVGYSWASAALAVGP  345 (354)
T ss_dssp             ---CH----------------HHHCBCGGGHHHHHHHHHSHH-HHHHSCEEEEEEEEETTTEEEEEEEEECC
T ss_pred             ---HH----------------hhhCcHHHHHHHHHHHHHHHh-CCCCCCCEEEEEEEchhhhheeeEEEECC
Confidence               34                899999999999999999988 67789999999999999999999999976

>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}

Probab=100.00  E-value=5.8e-48  Score=386.31  Aligned_cols=305  Identities=17%  Similarity=0.178  Sum_probs=254.7

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHh-----cCCCccee--EEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCc
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAH-----DGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQI   75 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~-----~g~~~~k~--~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dI   75 (446)
                      |+++|.+++.|+|+++++++++++.     .+.+++|+  ++|+++|+.  +.++|+..+|+++|++++|+++|+++++|
T Consensus        10 m~v~I~g~g~~lP~~~v~~~~l~~~l~~~~~~~~~~~i~~rtgi~~r~~--~~~~~~~~~la~~Aa~~al~~ag~~~~~I   87 (333)
T 4dfe_A           10 IYSRVLGTGSYLPPNRVTNQDLAKRLAEQGIETSDEWIVARTGIHARYF--AEPDVTTSDLAFIASQRAIEAADIDPQSI   87 (333)
T ss_dssp             CEEEEEEEEEECCSEEEEHHHHHHHHC---CCCCHHHHHHHHCCSEEEE--CCTTCCHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred             cceEEEEEEEECCCcEEcHHHHHHHhccccCCCCHHHhHHhcCceEEEE--cCCCCCHHHHHHHHHHHHHHHcCCCHHHC
Confidence            5799999999999999999999998     45566776  468888774  47899999999999999999999999999


Q ss_pred             cEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCcc-CCC
Q 013297           76 GRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AEG  154 (446)
Q Consensus        76 d~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~~  154 (446)
                      |.||++|+++++..|+++.+|+++||+  ++++++++++++|+|++.||..|..+|++|..  ++||||++|..+. .++
T Consensus        88 d~vi~~t~~~~~~~p~~a~~v~~~lgl--~~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~--~~vLvvg~e~~s~~~~~  163 (333)
T 4dfe_A           88 DLIIVATSTPDFVFPSTACLLQNKLGI--RNHGAAFDVQAVCSGFAYAVATADSFIRSGQH--RTALVIGAETFSRILDF  163 (333)
T ss_dssp             CEEEEECSSCSSSBSCHHHHHHHHTTC--CSCCEEEEEECGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEEEGGGGCCT
T ss_pred             CEEEEEeCCCCCCCCcHHHHHHHHhCC--CCCCcEEEeCcccHHHHHHHHHHHHHHHcCCC--CEEEEEEeeccccccCc
Confidence            999999999999899999999999998  57899999999999999999999999999965  9999999999843 222


Q ss_pred             C---CCccccccceeeeeccCCCcccccccccccccccccccc-cCC-------CCCCcccCChhHHHHHHHHHHHHHHH
Q 013297          155 P---ARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYK-PNL-------ASEYPVVDGKLSQTCYLMALDTCYKC  223 (446)
Q Consensus       155 ~---~~~t~GdGAvA~Ll~~~~~~~~~~~~~g~~~~~~~df~~-p~~-------~~~~p~~dG~~s~~~yl~~l~~~~~~  223 (446)
                      .   ...+|||||+|+||++.+...+......+.. ...+.++ |.+       ...+..++|+..++.+.+.+++++++
T Consensus       164 ~d~~~~~lfGDGA~A~vl~~~~~~~i~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~  242 (333)
T 4dfe_A          164 KDRTTCVLFGDGAGAVILQASDEPGVLASALHADG-SHSNILCTPGNVNGGVVSGSAFLHMDGQAVFKLAVNVLEKVAVE  242 (333)
T ss_dssp             TCTTTTTTBCEEEEEEEEEEESSCSEEEEEEEECG-GGGGGEEBCEEEETTEEEECCSCEECHHHHHHHHHHHHHHHHHH
T ss_pred             ccccceeeeccccEEEEEEEcCCCCeEEEEEEEcc-CCcCeEEECCCCCCcccccCcceeeccHHHHHHHHHHHHHHHHH
Confidence            2   3467999999999998753111100011111 1122222 210       12245688999888888999999999


Q ss_pred             HHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHH
Q 013297          224 LCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQ  303 (446)
Q Consensus       224 ~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~  303 (446)
                      ++++.      +++++|||||++||+|.++++.+.++|                        +++.++++.         
T Consensus       243 ~l~~~------gl~~~did~~~~Hq~~~~i~~~~~~~l------------------------gl~~~~~~~---------  283 (333)
T 4dfe_A          243 ALEKA------NLSAEQIDWLIPHQANIRIMQSTCRKL------------------------GLPQERMIV---------  283 (333)
T ss_dssp             HHHHT------TCCGGGCSEEEECCSCHHHHHHHHHHT------------------------TCCGGGBCC---------
T ss_pred             HHHHc------CCCHHHCCEEEEcCCCHHHHHHHHHHh------------------------CCCHHHhhh---------
Confidence            98886      799999999999999999999999988                        888876653         


Q ss_pred             hhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEE
Q 013297          304 QLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKL  370 (446)
Q Consensus       304 ~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~  370 (446)
                      ++                +++||+++||+|++|.+++++ +++++||+|+|++||+|++|++++++|
T Consensus       284 ~l----------------~~~GNt~sasi~~~L~~~~~~-g~~~~Gd~vll~~~G~G~t~~~~ll~~  333 (333)
T 4dfe_A          284 TV----------------GEHGNTSAASIPLALDVAVRD-GRIKRGQNVLIEGVGGGFTWGASVIRY  333 (333)
T ss_dssp             CH----------------HHHCBCGGGHHHHHHHHHHHT-TCSCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred             hH----------------HhcCchHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEchhheeEEEEEEC
Confidence            23                799999999999999999998 788999999999999999999999987

>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*

Probab=100.00  E-value=1.5e-47  Score=381.36  Aligned_cols=301  Identities=19%  Similarity=0.208  Sum_probs=240.2

Q ss_pred             CCceeEEeEEEEecCCccccHHHHHHhcCCCccee--EEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEE
Q 013297            1 MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRL   78 (446)
Q Consensus         1 ~~~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~l   78 (446)
                      |+++++|.+++.|+|+++|+++++++..+.+++|+  ++|+.+|++  +.++| ..+|+++|++++|+++|+++++||.|
T Consensus         1 ~~~~~~I~~~g~~lP~~~v~n~~~~~~~~~~~~~i~~~~Gi~~R~~--a~~~e-~~~La~~Aa~~aL~~ag~~~~~Id~l   77 (321)
T 3il6_A            1 MKNYARISCTSRYVPENCVTNHQLSEMMDTSAAWIHSRTGISERRI--VTQEN-TSDLCHQVAKQLLEKSGKQASEIDFI   77 (321)
T ss_dssp             -CCEEEEEEEEEECCSCEEEHHHHHHHTTSCHHHHHHHHSCSEEEC--CSSCC-HHHHHHHHHHHHHHHHTCCGGGCCEE
T ss_pred             CCCcEEEEEEEEECCCcEEcHHHHHHHhCCChhhhhhhcCceEEEE--CCCCC-HHHHHHHHHHHHHHHcCCCHHHCCEE
Confidence            89999999999999999999999999999988888  368888874  46677 99999999999999999999999999


Q ss_pred             EEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCcc-CCCC--
Q 013297           79 EVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AEGP--  155 (446)
Q Consensus        79 i~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~~~--  155 (446)
                      |++|+++++..|+++.+|+++||+   ++++++|++++|+|++.||..|..+|++|..  ++||||++|..+. .++.  
T Consensus        78 i~~t~~~~~~~p~~a~~v~~~lGl---~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~--~~vLvvg~e~~s~~~~~~dr  152 (321)
T 3il6_A           78 LVATVTPDFNMPSVACQVQGAIGA---TEAFAFDISAACSGFVYALSMAEKLVLSGRY--QTGLVIGGETFSKMLDWTDR  152 (321)
T ss_dssp             EEECSSCSCSSSCHHHHHHHHTTC---TTCEEEEECCGGGHHHHHHHHHHHHHHTSSC--CCEEEEEEECGGGGSCTTCT
T ss_pred             EEEeCCCCcCCCcHHHHHHHHcCC---CCceEEEeCcccHHHHHHHHHHHHHHHCCCC--CEEEEEEEccccccCCcccc
Confidence            999999999899999999999997   4599999999999999999999999999965  9999999999842 2333  


Q ss_pred             -CCccccccceeeeeccCCCcccccccccccccccccccccCCC------------CCCcccCChhHHHHHHHHHHHHHH
Q 013297          156 -ARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLA------------SEYPVVDGKLSQTCYLMALDTCYK  222 (446)
Q Consensus       156 -~~~t~GdGAvA~Ll~~~~~~~~~~~~~g~~~~~~~df~~p~~~------------~~~p~~dG~~s~~~yl~~l~~~~~  222 (446)
                       ...+|||||+|+||++++...+......+.......++.|.++            ..+..++|+..++...+.++++++
T Consensus       153 ~~~~lfGDGA~A~vl~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~  232 (321)
T 3il6_A          153 STAVLFGDGAAGVLIEAAETPHFLNEKLQADGQRWTALTSGYTINESPFYQGHKQASKTLQMEGRSIFDFAIKDVSQNIL  232 (321)
T ss_dssp             TTGGGBCCEEEEEEEEEESSCCEEEEEEEECGGGGGGEECCCCCCCSTTCCCCCCCCCSCEECHHHHHHHHHHHHHHHHH
T ss_pred             ccceeeccccEEEEEEEcCCCCEEEEEEEEcCCCCCeEEeCCCCCCCCCCccccccccceeechHHHHHHHHHHHHHHHH
Confidence             3467999999999998764211110111111111112233221            123345565544433344443333


Q ss_pred             HHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHH
Q 013297          223 CLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVS  302 (446)
Q Consensus       223 ~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~  302 (446)
                          ++       +.++|||+|++||+|.++++.+.++|                        |++.++++.        
T Consensus       233 ----~~-------l~~~did~~v~Hq~~~~i~~~~~~~l------------------------gl~~ek~~~--------  269 (321)
T 3il6_A          233 ----SL-------VTDETVDYLLLHQANVRIIDKIARKT------------------------KISREKFLT--------  269 (321)
T ss_dssp             ----TT-------CCGGGCSEEEECCSCHHHHHHHHHHH------------------------TCCGGGBCC--------
T ss_pred             ----HH-------cCcccCCEEEEcCCCHHHHHHHHHHc------------------------CcCHHHhhh--------
Confidence                22       22789999999999999999999988                        888877652        


Q ss_pred             HhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCCCCC--CEEEEEEeccccceeeEEEEE
Q 013297          303 QQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDG--KRVVLFSYGSGLTATMFSLKL  370 (446)
Q Consensus       303 ~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G--~~vll~syGsG~~~~~~~l~~  370 (446)
                       ++                +++|||++||+|++|.+++++ +++++|  |+|+|++||+|++|+++++++
T Consensus       270 -~l----------------~~~GNt~sasi~~~L~~~~~~-g~~~~G~~d~vll~~fG~G~t~~~~~l~v  321 (321)
T 3il6_A          270 -NM----------------DKYGNTSAASIPILLDEAVEN-GTLILGSQQRVVLTGFGGGLTWGSLLLTL  321 (321)
T ss_dssp             -CG----------------GGTCBCGGGHHHHHHHHHHHT-TSSCTTSCCEEEEEEEETTTEEEEEEEEC
T ss_pred             -hH----------------hhcccHHHHHHHHHHHHHHHh-CCCCCCCCCEEEEEEEehhheeEEEEEEC
Confidence             34                899999999999999999998 888999  999999999999999999975

>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*

Probab=100.00  E-value=2.1e-47  Score=385.75  Aligned_cols=303  Identities=17%  Similarity=0.160  Sum_probs=254.1

Q ss_pred             CceeEEeEEEEecCCccccHHHHHHhcCCCccee--EEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEE
Q 013297            2 AKNVGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLE   79 (446)
Q Consensus         2 ~~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li   79 (446)
                      +++++|.+++.|+|+++++++++++..+.+++|+  ++|+.+|+  ++.++|+..+|+++|++++|+++|+++++||.||
T Consensus        23 ~~~~~I~~~g~~~P~~~v~~~~l~~~~~~~~~~i~~~tGi~~R~--~a~~~~~~~~La~~Aa~~aL~~agl~~~dId~vi  100 (359)
T 3h78_A           23 QGNPILAGLGFSLPKRQVSNHDLVGRINTSDEFIVERTGVRTRY--HVEPEQAVSALMVPAARQAIEAAGLLPEDIDLLL  100 (359)
T ss_dssp             -CCCEEEEEEEECCSEEEEHHHHTTTSSCCHHHHHHHHCCCEEE--ECCTTCCTHHHHHHHHHHHHHHTTCCGGGCCEEE
T ss_pred             CCCcEEEEEEEECCCceEcHHHHHHHhCCCHHHHHHhcCceEEE--EcCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEE
Confidence            3579999999999999999999999999988887  46777777  4578999999999999999999999999999999


Q ss_pred             EEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCcc-CCCCC--
Q 013297           80 VGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AEGPA--  156 (446)
Q Consensus        80 ~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~~~~--  156 (446)
                      ++|+++++..|+++.+|++.||+   +++++++++++|+|++.||.+|..+|++|..  ++||||++|..+. .++.+  
T Consensus       101 ~~t~~~~~~~p~~a~~v~~~lGl---~~~~~~~v~~aC~s~~~Al~~A~~~i~sG~~--~~vLvvg~e~~S~~~~~~d~~  175 (359)
T 3h78_A          101 VNTLSPDHHDPSQACLIQPLLGL---RHIPVLDIRAQASGLLYGLQMARGQILAGLA--RHVLVVCGEVLSKRMDCSDRG  175 (359)
T ss_dssp             EECSSCSSSBSCHHHHHHHHHTC---CSCCEEEEECGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEEECGGGCCCSTTT
T ss_pred             EEeCCCCCCCCcHHHHHHHHcCC---CCCcEEEECCHhHHHHHHHHHHHHHHHCCCc--CEEEEEEEchhcccCCccccc
Confidence            99999988899999999999997   5789999999999999999999999999965  9999999999843 33333  


Q ss_pred             C---ccccccceeeeeccCCC--ccc---ccccccccccccccccccC---------------CCCCCcccCChhHHHHH
Q 013297          157 R---PTGGAAAVVMLVGPDAP--VAF---ESKLRGSHMSHAYDFYKPN---------------LASEYPVVDGKLSQTCY  213 (446)
Q Consensus       157 ~---~t~GdGAvA~Ll~~~~~--~~~---~~~~~g~~~~~~~df~~p~---------------~~~~~p~~dG~~s~~~y  213 (446)
                      +   .+|||||+|+||++++.  ..+   .....+.+..   ....|.               ....+..++|+..++.+
T Consensus       176 ~~t~~lfGDGAaA~vl~~~~~~~~~i~~~~~~s~g~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~  252 (359)
T 3h78_A          176 RNLSILLGDGAGAVVVSAGESLEDGLLDLRLGADGNYFD---LLMTAAPGSASPTFLDENVLREGGGEFLMRGRPMFEHA  252 (359)
T ss_dssp             HHHHTTBCEEEEEEEEECCSCSSSEEEEEEEEECGGGGG---GEEBCCSSTTSSSTTCHHHHHTTTTSCEECHHHHHHHH
T ss_pred             ccccceecceeEEEEEEecCCCCCceEEEEEEEccCccc---eEEeCCCCCccCCccccccccccCCceEeccHHHHHHH
Confidence            2   56999999999998763  111   1111112111   111121               11224557888888888


Q ss_pred             HHHHHHHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccc
Q 013297          214 LMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESY  293 (446)
Q Consensus       214 l~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~  293 (446)
                      .+.+++++++++++.      +++++|||+|++||+|.++++.+.++|                        |++.++++
T Consensus       253 ~~~~~~~i~~~L~~~------gl~~~did~~v~Hq~n~~i~~~~~~~l------------------------gl~~ek~~  302 (359)
T 3h78_A          253 SQTLVRIAGEMLAAH------ELTLDDIDHVICHQPNLRILDAVQEQL------------------------GIPQHKFA  302 (359)
T ss_dssp             HHHHHHHHHHHHHHT------TCCGGGCSEEEECCSCHHHHHHHHHHH------------------------TCCGGGBC
T ss_pred             HHHHHHHHHHHHHHc------CCCHHHCCEEEECCCCHHHHHHHHHHh------------------------CcCHHHhh
Confidence            999999999999886      899999999999999999999999998                        88887765


Q ss_pred             cchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEEeC
Q 013297          294 QSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSE  372 (446)
Q Consensus       294 ~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~~~  372 (446)
                      .         ++                +++||+++||+|++|.+++++   +++||+|+|++||+|++|++++++|.+
T Consensus       303 ~---------~l----------------~~~GNt~sAsi~l~L~~~~~~---l~~Gd~vll~~fG~G~t~~~~ll~~~~  353 (359)
T 3h78_A          303 V---------TV----------------DRLGNMASASTPVTLAMFWPD---IQPGQRVLVLTYGSGATWGAALYRKPE  353 (359)
T ss_dssp             C---------CH----------------HHHCBCGGGHHHHHHHHHGGG---SCTTCEEEEEEEETTTEEEEEEEECC-
T ss_pred             h---------hh----------------hcccchHHHHHHHHHHHHHHh---CCCCCEEEEEEEchhhhheeeeEEehh
Confidence            3         33                799999999999999999986   689999999999999999999999976

>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A

Probab=100.00  E-value=3.9e-47  Score=382.12  Aligned_cols=304  Identities=18%  Similarity=0.178  Sum_probs=250.4

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhc-------CCCccee--EEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcC
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHD-------GASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPK   73 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~-------g~~~~k~--~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~   73 (446)
                      ++++|.+++.|+|+++++|+++++..       +.+++|+  ++||.+|++  ++++|++.+|+++|++++|+++|++++
T Consensus        11 ~~v~I~~~g~~lP~~~v~n~~l~~~~~~~~~~~~~~~~~i~~~tGi~~R~~--~~~~~~~~~La~~Aa~~al~~ag~~~~   88 (345)
T 3s21_A           11 QNVSIAGLAHIDAPHTLTSKEINERLQPTYDRLGIKTDVLGDVAGIHARRL--WDQDVQASDAATQAARKALIDANIGIE   88 (345)
T ss_dssp             SSEEEEEEEEEECSEEEEHHHHHHHHHHHHHHHTCCCCHHHHTTCCSEEEE--CSSCCCHHHHHHHHHHHHHHHHTCCGG
T ss_pred             cceEEEEEEEeCCCcEEcHHHHHHHHhhcccccCCCHHHHHHhhCceeEEE--CCCCCCHHHHHHHHHHHHHHHcCCCHH
Confidence            57999999999999999999998864       6778887  467888774  478999999999999999999999999


Q ss_pred             CccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCcc--
Q 013297           74 QIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY--  151 (446)
Q Consensus        74 dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y--  151 (446)
                      +||.||++|+++++..|+++.+|++.||+  .+++++++++++|+|++.||..|..+|++|.+  ++||||++|..+.  
T Consensus        89 ~Id~vi~~t~~~~~~~p~~a~~v~~~lGl--~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~--~~vLvvg~e~~s~~~  164 (345)
T 3s21_A           89 KIGLLINTSVSRDYLEPSTASIVSGNLGV--SDHCMTFDVANACLAFINGMDIAARMLERGEI--DYALVVDGETANLVY  164 (345)
T ss_dssp             GCCEEEECCSCCSCSSSCHHHHHHHHHTC--CTTCEEEECCCGGGHHHHHHHHHHHHHHHTSC--SEEEEEEEECCHHHH
T ss_pred             HCCEEEEEeCCCCCCCChHHHHHHHHhCC--CCCceEEeECCcCHHHHHHHHHHHHHHHCCCC--CEEEEEEEcccchhh
Confidence            99999999999999899999999999998  55799999999999999999999999999966  9999999999842  


Q ss_pred             --C------CC-C--------CCccccccceeeeeccCCCccccccccccccc---ccccccccCCCCCCcccCChhHHH
Q 013297          152 --A------EG-P--------ARPTGGAAAVVMLVGPDAPVAFESKLRGSHMS---HAYDFYKPNLASEYPVVDGKLSQT  211 (446)
Q Consensus       152 --~------~~-~--------~~~t~GdGAvA~Ll~~~~~~~~~~~~~g~~~~---~~~df~~p~~~~~~p~~dG~~s~~  211 (446)
                        .      +. +        ...+|||||+|+||++++...-...+.++...   +..+++++..  .+..+||+..++
T Consensus       165 ~~~~~~~~~~~~~~~~f~~~~~~~~~GdGA~A~vl~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~g~~v~~  242 (345)
T 3s21_A          165 EKTLERMTSPDVTEEEFRNELAALTLGCGAAAMVMARSELVPDAPRYKGGVTRSATEWNKLCRGNL--DRMVTDTRLLLI  242 (345)
T ss_dssp             HHHHHHHTCTTCCHHHHHHHHGGGGBCCEEEEEEEEEGGGSTTSCEEEEEEEEECGGGTTC-------------CHHHHH
T ss_pred             ccccccccCCccchhhhhhhccceeeccceeEEEEecCCCCCCCcceeeeccccCcchhhhccccC--cceEEcHHHHHH
Confidence              1      11 1        13579999999999987531000112222211   2234455432  234679998888


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCc
Q 013297          212 CYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDE  291 (446)
Q Consensus       212 ~yl~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~  291 (446)
                      .+.+.+++++++++++.      +++++|||+|++||+|.++++.+.++|                        |++.++
T Consensus       243 ~~~~~~~~~i~~~l~~~------gl~~~did~~v~Hq~~~~i~~~~~~~l------------------------gl~~ek  292 (345)
T 3s21_A          243 EGIKLAQKTFVAAKQVL------GWAVEELDQFVIHQVSRPHTAAFVKSF------------------------GIDPAK  292 (345)
T ss_dssp             HHHHHHHHHHHHHHHHH------CCCGGGCSEEEECCSCHHHHHHHHHHH------------------------TCCGGG
T ss_pred             HHHHHHHHHHHHHHHHc------CCCHHHCCEEEeCCCCHHHHHHHHHHc------------------------CcCHHH
Confidence            88899999999998887      899999999999999999999999988                        888876


Q ss_pred             cccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEE
Q 013297          292 SYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKL  370 (446)
Q Consensus       292 ~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~  370 (446)
                      .+.         ++                +++|||++||+|++|.+++++ +++++||+|+|++||+|+++++++++|
T Consensus       293 ~~~---------~l----------------~~~GNt~sasi~~~L~~~~~~-g~~~~Gd~vll~~~G~G~t~~~~~l~w  345 (345)
T 3s21_A          293 VMT---------IF----------------GEHGNIGPASVPIVLSKLKEL-GRLKKGDRIALLGIGSGLNCSMAEVVW  345 (345)
T ss_dssp             BCC---------CH----------------HHHCBCGGGHHHHHHHHHHHH-TCCCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred             cee---------eH----------------hhcCchHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEChhhhheEEEEEC
Confidence            542         33                799999999999999999999 889999999999999999999999997

>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}

Probab=100.00  E-value=5.1e-44  Score=364.76  Aligned_cols=306  Identities=15%  Similarity=0.112  Sum_probs=240.5

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhc------------------------CCCccee--EEeecceEEecCCC-------
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHD------------------------GASKGKY--TIGLGQECMAFCSE-------   49 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~------------------------g~~~~k~--~~Glg~r~~av~~~-------   49 (446)
                      +++.|.++|.|+|+++|+|+|+++..                        +.+.+|+  ++||.+|+++.++.       
T Consensus        23 ~~~~I~gig~~~P~~~v~n~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~I~~~tGI~~R~~a~~~~~~~~~~~  102 (392)
T 3led_A           23 RPAVIAATGLYTPPDSVSNAELVEAFNTYVANFNAANKARIEAGEIEPLQPSSSEFIEKASGIKSRYVVAKPGIVDPDVM  102 (392)
T ss_dssp             CCEEEEEEEEECCSEEEEHHHHHHHHHHHHHHHHHHTHHHHHTTSSCCCCCCCHHHHHHHHCCCEEEESCCGGGGCTTTC
T ss_pred             CceEEEEEEEeCCCceEcHHHHHHHHhhhhcccccccchhhhcccccccCCCcHHHHHHccCCceEEEecCccccccccc
Confidence            56999999999999999999998642                        2345677  58999999764311       


Q ss_pred             --------C---CCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcCh
Q 013297           50 --------V---EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACY  118 (446)
Q Consensus        50 --------~---Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~  118 (446)
                              +   +.+.+|+++|++++|+++|+++++||.||++|+++++..|+++.+|++.||+    ++.++|++++|+
T Consensus       103 ~~~~~~r~~~~~~~~~~La~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~~p~~a~~v~~~LGl----~~~~~dv~~aC~  178 (392)
T 3led_A          103 RPIIPERSNDELSILAEMAVTAAEQAIERWGKPRERIGAVLCACSNMQRAYPAMAIEVQNALGL----GGFAFDMNVACS  178 (392)
T ss_dssp             SCCCCCCCTTSCCHHHHHHHHHHHHHHHHHCSCGGGEEEEEEESSCCSCSBSCHHHHHHHHTTC----CSEEEEEECGGG
T ss_pred             ccccccchhcccccHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCccHHHHHHHHHhCC----CCeEEEECCccH
Confidence                    1   1478999999999999999999999999999999999999999999999996    378999999999


Q ss_pred             hHHHHHHHHHHHHHcCCCCCCEEEEEEeecCcc-CCC---CCCccccccceeeeeccCCC----cccccccccccccc-c
Q 013297          119 GGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AEG---PARPTGGAAAVVMLVGPDAP----VAFESKLRGSHMSH-A  189 (446)
Q Consensus       119 gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~~---~~~~t~GdGAvA~Ll~~~~~----~~~~~~~~g~~~~~-~  189 (446)
                      |++.||.+|..+|++|..  ++||||++|.++. .++   ....+|||||+|+||++++.    ..+......+...+ .
T Consensus       179 g~~~aL~~A~~~i~~g~~--~~vLvvg~E~~S~~~d~~dr~t~~lFGDGA~A~vl~~~~~~~~~~~i~~~~~~s~~~~~~  256 (392)
T 3led_A          179 SATFGLKTAADFVGGGSV--DAVLMVNPEICSGHLNFRDRDSHFIFGDVATAAIVERADDAQGGWSILGTKLKTQFSNNI  256 (392)
T ss_dssp             HHHHHHHHHHHHHHTTSC--SEEEEEEEEEGGGGCCTTCTTTTTTBCEEEEEEEEEEGGGCCSSEEEEEEEEEECCCSSE
T ss_pred             HHHHHHHHHHHHHHCCCC--CEEEEEeehhcCCcCCcCcccCCcccccccEEEEEEecCCCCCCCeEEEEEEEEcccccc
Confidence            999999999999999965  9999999999842 232   23578999999999998652    11111011111110 0


Q ss_pred             ---cccccc---C---CCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHH
Q 013297          190 ---YDFYKP---N---LASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFAR  260 (446)
Q Consensus       190 ---~df~~p---~---~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~  260 (446)
                         ..+..+   .   ....+..++|+..++...+.+++++++++++.      +++++|||+|++||+|.+|++.+.++
T Consensus       257 ~~~~g~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~~i~~~L~~~------gl~~~dId~~v~Hqan~~i~~~~~~~  330 (392)
T 3led_A          257 RNNAGFLNRAWPEGRDKADKLFVQQGRKVFKEVVPLVSEMIIEHAREI------GIDPHGLKRMWLHQANINMNEIIGRK  330 (392)
T ss_dssp             EBCCSGGGGGSGGGTTSGGGSCEECHHHHHHHHHHHHHHHHHHHHHHT------TCCGGGCSEEEECSSCHHHHHHHHHH
T ss_pred             ccCCCcccCCCccccccccceEEechHHHHHHHHHHHHHHHHHHHHHc------CCCHHHCcEEEEcCCCHHHHHHHHHH
Confidence               000011   0   00123456888887777888888998888886      89999999999999999999999888


Q ss_pred             hhhhhccccccchhhHhhhhcCCCCC--CCCCccccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHH
Q 013297          261 LLFNDFMRNASSVDEAAKEKLGPFST--LSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALAS  338 (446)
Q Consensus       261 l~~~~~~~~~~~~~~~~~~~~~~~~g--~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~  338 (446)
                      |+                       |  ++.++++         .++                +++|||++||+|++|..
T Consensus       331 ll-----------------------gl~~~~~k~~---------~~l----------------~~~GNtssAsipl~L~~  362 (392)
T 3led_A          331 VL-----------------------GRDPTRDENV---------IIL----------------DDYANTSSAGSIIAFHK  362 (392)
T ss_dssp             HH-----------------------TSCCCTTTBC---------CCH----------------HHHCBCGGGHHHHHHHH
T ss_pred             hc-----------------------CCCCCHHHHH---------HHH----------------hhhCccHHHHHHHHHHH
Confidence            52                       3  3444433         234                89999999999999998


Q ss_pred             HHHhcCCCCCCCEEEEEEeccccceeeEEEEEe
Q 013297          339 LIHNKHSELDGKRVVLFSYGSGLTATMFSLKLS  371 (446)
Q Consensus       339 ~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~~  371 (446)
                      +  . +++++||+|+|++||+|++|++++++|.
T Consensus       363 ~--~-~~~~~Gd~vll~gfG~G~t~~~~ll~~~  392 (392)
T 3led_A          363 H--Q-DDMAQGDLGLICSFGAGYSAGTVFVQKR  392 (392)
T ss_dssp             C--C-TTCCTTCEEEEEEEETTTEEEEEEEEEC
T ss_pred             H--h-CCCCCCCEEEEEEEChhhEeEEEEEEEC
Confidence            6  3 5788999999999999999999999984

>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*

Probab=100.00  E-value=4.6e-44  Score=361.21  Aligned_cols=304  Identities=16%  Similarity=0.145  Sum_probs=235.6

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhcCCCcceeEEeecceEEecCCCCC--CHHHHHHHHHHHHHHHCCCCcCCccEEEE
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVE--DVISMSLTAVTNLLEKYKIDPKQIGRLEV   80 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Glg~r~~av~~~~E--d~~~lA~~Aa~~aL~~agi~~~dId~li~   80 (446)
                      ++|+|.++|.|+|+..+.++++++....+.++-++|+.+|+  +++++|  ++.+|+++|++++|+++|+++++||.||+
T Consensus         4 ~~v~I~g~g~ylP~~~~~~~~~~~~~~~~~~~~~tGi~~r~--~a~~~e~~~~~~La~~Aa~~aL~~ag~~~~dId~vi~   81 (357)
T 3s3l_A            4 ENLFVSGVAAWLPPLSTAQDAVMAGLLDPARSKLRGIESVT--VASDAEEDAPPRMAARAARAALGRGDVDPADVSLVLH   81 (357)
T ss_dssp             SSCEEEEEEEECCCEEEHHHHHHTTSSCHHHHHHHCCCEEE--CCCSSGGGSHHHHHHHHHHHHHHHTTCCGGGEEEEEE
T ss_pred             CceEEEEEEEECCCCCCHHHHHHhcCCcHHHHHHcCceEEE--ecCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence            57999999999999888887776532222222246777777  446677  99999999999999999999999999999


Q ss_pred             Eecc---CCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCC--EEEEEEeecCc-c--C
Q 013297           81 GSET---VIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGR--YGLVVCTDSAV-Y--A  152 (446)
Q Consensus        81 ~T~t---~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~--~aLVVasD~~~-y--~  152 (446)
                      +|++   ++.  ++++.+|+++||+   ++++++|++++|+|++.||.+|..+|++|.+  +  +||||++|..+ .  .
T Consensus        82 ~t~~~~~~d~--~~~a~~v~~~lG~---~~~~~~~v~~aC~~~~~al~~A~~~i~sg~~--~~~~vLvvg~e~~s~~~~~  154 (357)
T 3s3l_A           82 SSLWFQGIDL--WPAASYVAHEAVG---RHVPAFGLAQRCNGGMGAIELAGAYLGSGIG--AGHAALLTTGDRFAGPRID  154 (357)
T ss_dssp             ECSSCCSSSS--SCHHHHHHHHHTC---SSSCEEEEECGGGHHHHHHHHHHHHHHTTSS--SSSEEEEEEEECCCTTTCC
T ss_pred             EeccCCCccc--ccHHHHHHHHhCC---CCCcEEEEcCccHHHHHHHHHHHHHHHcCCC--CCCEEEEEEEecccccccc
Confidence            9984   443  3679999999997   5789999999999999999999999999966  7  99999999986 2  2


Q ss_pred             CCC--CCccccccceeeeeccCCCc-ccccccccccccccccccccCC-------C-CCCcccCChhHHH----------
Q 013297          153 EGP--ARPTGGAAAVVMLVGPDAPV-AFESKLRGSHMSHAYDFYKPNL-------A-SEYPVVDGKLSQT----------  211 (446)
Q Consensus       153 ~~~--~~~t~GdGAvA~Ll~~~~~~-~~~~~~~g~~~~~~~df~~p~~-------~-~~~p~~dG~~s~~----------  211 (446)
                      ++.  ...+|||||+|+||++++.. .+......+... ..+++++.+       . ..+..++|+..+.          
T Consensus       155 ~~~~~~~~lfGDGA~A~vl~~~~~~~~i~~~~~~s~g~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~  233 (357)
T 3s3l_A          155 RWNSVDVTMYGDGAAALVLSTRDGFARVLSTATGVDNS-LEILARGDEPFAPHPVEPSPVADLGTRTVRGAELADLPDLT  233 (357)
T ss_dssp             TTTSSSSCCBCCEEEEEEEESSCCSEEEEEEEEEECGG-GGGGGTTTCCCCSSCCSSCCCCCHHHHHHHHHHHHCCTTHH
T ss_pred             cccccCCcccccccEEEEEecCCCCCeEEEEEEEEccC-hhhhcccCCCCCCCccCcCCccccccchhhhhcccchhhhH
Confidence            333  35789999999999987641 111101111111 123333221       0 0112234542232          


Q ss_pred             -HHHHHHHHHHHHHHHHhhhhhCCCCCcCCCceeec-cCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCC
Q 013297          212 -CYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVF-HSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSG  289 (446)
Q Consensus       212 -~yl~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~-H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~  289 (446)
                       .+.+.+++++++++++.      +++++|||+|++ ||++.+ ++.+.++|                        |++.
T Consensus       234 ~~~~~~~~~~i~~~L~~~------gl~~~did~~v~~hq~~~~-~~~~~~~l------------------------gl~~  282 (357)
T 3s3l_A          234 HRYIDLLVAAKTQALEDA------GTAIEDIAHAVIPVSRRGT-GHELHDLL------------------------GLPD  282 (357)
T ss_dssp             HHHHHHHHHHHHHHHHHT------TCCGGGCSEEECCSCCCCS-SCCHHHHH------------------------TSCG
T ss_pred             HHHHHHHHHHHHHHHHHc------CCCHHHCCEEEecCcChHH-HHHHHHHc------------------------CCCH
Confidence             55677888888888876      899999999996 999998 88888888                        8888


Q ss_pred             CccccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEE
Q 013297          290 DESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLK  369 (446)
Q Consensus       290 e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~  369 (446)
                      ++++.         ++               .+++|||++||+|++|.+++++ +++++||+|+|++||+|++|++++++
T Consensus       283 ek~~~---------~~---------------~~~~GNt~aAsipl~L~~~~~~-g~l~~Gd~vll~~fG~G~t~~a~ll~  337 (357)
T 3s3l_A          283 ERTSW---------AY---------------GRTTGHVGAGDQYAGLAHLVEN-ALVQPGDRVLLFGGGAGYTCTAAVVE  337 (357)
T ss_dssp             GGBTH---------HH---------------HHHHCBCTTCHHHHHHHHHHHT-TCCCTTCEEEEECCBTTTEEEEEEEE
T ss_pred             HHhHH---------Hh---------------ccccccchHhHHHHHHHHHHHc-CCCCCCCEEEEEEEchhhhheeeeEE
Confidence            87652         22               2689999999999999999998 88999999999999999999999999


Q ss_pred             EeC
Q 013297          370 LSE  372 (446)
Q Consensus       370 ~~~  372 (446)
                      |.+
T Consensus       338 ~~~  340 (357)
T 3s3l_A          338 ILR  340 (357)
T ss_dssp             ECC
T ss_pred             ecc
Confidence            975

>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.5e-43  Score=353.92  Aligned_cols=305  Identities=18%  Similarity=0.201  Sum_probs=250.0

Q ss_pred             CCceeEEeEEEEecCCccccHHHHHHhcCCCccee--EEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEE
Q 013297            1 MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRL   78 (446)
Q Consensus         1 ~~~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~l   78 (446)
                      |+|+++|.+++.|+|+++++++++++..+.+.+|+  ++|+.+|+++  .+ ++..+|+++|++++|+++|+  ++||.|
T Consensus         2 ~~m~~~I~g~g~~~P~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~--~~-~~~~~la~~Aa~~al~~ag~--~~id~v   76 (331)
T 2x3e_A            2 MPRAAVVCGLGSYLPEAVLSNDMLAAELDTSDAWISSRTGVRQRHIA--GD-LGSGDLALRAASAALASAGL--ERVDAV   76 (331)
T ss_dssp             --CEEEEEEEEEECCSCEEEHHHHHHHTTCCHHHHHHHHCCCEEECC--TT-CCHHHHHHHHHHHHHHHHTC--SCCSEE
T ss_pred             CCceeEEEEEEEECCCcEecHHHHHHHhCCCHHHHHHhhCceEEEec--CC-CCHHHHHHHHHHHHHHhCCc--ccCCEE
Confidence            45789999999999999999999999988888887  4688888754  44 89999999999999999999  899999


Q ss_pred             EEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCcc-CCCCC-
Q 013297           79 EVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AEGPA-  156 (446)
Q Consensus        79 i~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~~~~-  156 (446)
                      +++|+++++..|+++.+|+.+||+   +++++++++++|+|++.||..|..+|++|..  ++|||+++|..+. .++.+ 
T Consensus        77 i~~t~~~~~~~p~~a~~v~~~lgl---~~~~~~~v~~aCas~~~Al~~A~~~i~~g~~--~~vLv~g~e~~s~~~~~~d~  151 (331)
T 2x3e_A           77 VLATSTGDFCCPATAPRVAARLGL---VGALAFDLSAAATGFVYGLASVGSLISAGLA--DSALLVGVDTFSHTLDPADR  151 (331)
T ss_dssp             EEECSSCSEEESCSHHHHHHHTTC---TTSEEEEEECGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEECGGGGSCTTCH
T ss_pred             EEEeCCCCCCCChHHHHHHHHhCC---CCCcEEEEcCcChHHHHHHHHHHHHHHcCCC--CEEEEEEeeccccCCCcccc
Confidence            999999988889999999999997   3489999999999999999999999999966  9999999998742 23322 


Q ss_pred             --CccccccceeeeeccCC--C-ccccccccccccccccc-ccccCCC---------CCCcccCChhHHHHHHHHHHHHH
Q 013297          157 --RPTGGAAAVVMLVGPDA--P-VAFESKLRGSHMSHAYD-FYKPNLA---------SEYPVVDGKLSQTCYLMALDTCY  221 (446)
Q Consensus       157 --~~t~GdGAvA~Ll~~~~--~-~~~~~~~~g~~~~~~~d-f~~p~~~---------~~~p~~dG~~s~~~yl~~l~~~~  221 (446)
                        ..+|||||+|+||++.+  . ..+......+... ..| ++.|.++         ..|..++|+..++.+.+.+.+++
T Consensus       152 ~~~~~~GdGA~A~vL~~~~~a~~~~i~~~~~~~dg~-~~~~~~~p~~~~~~p~~~~~~~~~~~~g~~v~~~~~~~~~~~i  230 (331)
T 2x3e_A          152 STRALFGDGAGAVVLRAGDAEEEGALLAFDLGSDGH-QFDLLMTPAVSRAERSSGQASNYFRMDGKAVFGQAVTQMSDSV  230 (331)
T ss_dssp             HHHHHBCCEEEEEEEEEECTTSTTBEEEEEEEECGG-GTTSEEEECCCHHHHHHTCCCCCCEECHHHHHHHHHHHHHHHH
T ss_pred             ccceeeccccEEEEEEecCCCCCCceEEEEEEEcCC-CCCeEEecCCCCCCCCccCcCceEEecCHHHHHHHHHHHHHHH
Confidence              35799999999998765  2 1110000111111 112 2334322         12446788888888888889999


Q ss_pred             HHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHH
Q 013297          222 KCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKV  301 (446)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~  301 (446)
                      ++++++.      +++++|||||++|+++.++.+.+.++|                        |++.++.+.       
T Consensus       231 ~~aL~~a------gl~~~did~~~~H~~~~~~~d~~~~~l------------------------g~~~~~~~~-------  273 (331)
T 2x3e_A          231 RRVLDRV------GWQASDLHHLVPHQANTRILAAVADQL------------------------DLPVERVVS-------  273 (331)
T ss_dssp             HHHHHHH------TCCGGGCSEEEECCCCHHHHHHHHHHH------------------------TCCGGGBCC-------
T ss_pred             HHHHHHc------CCCHHHCCEEEEcCCCHHHHHHHHHHc------------------------CCCHHHHhh-------
Confidence            9998887      799999999999999999999988887                        777665431       


Q ss_pred             HHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEEeC
Q 013297          302 SQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSE  372 (446)
Q Consensus       302 ~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~~~  372 (446)
                        ++                .++||+++||++++|.+++++ +++++|++|++++||+|+++++++++|.+
T Consensus       274 --~~----------------~~~Gnt~sAs~~~~L~~~~~~-~~~~~G~~vll~~~G~G~~~~~~~l~~~~  325 (331)
T 2x3e_A          274 --NI----------------AEVGNTVAASIPLALAHGLRQ-GILRDGGNMVLTGFGAGLTWGSVALRWPK  325 (331)
T ss_dssp             --CH----------------HHHCBCGGGHHHHHHHHHHHT-TCSCTTCEEEEEEEETTTEEEEEEEECCC
T ss_pred             --hH----------------hhhCcHHHHHHHHHHHHHHHh-CCCCCCCEEEEEEEeHHhhheeeEEEECC
Confidence              22                699999999999999999998 78899999999999999999999999965

>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*

Probab=100.00  E-value=1.1e-42  Score=345.23  Aligned_cols=305  Identities=20%  Similarity=0.206  Sum_probs=249.0

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhcCCCccee--EEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEE
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEV   80 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~   80 (446)
                      |+++|.++++|+|+.+++++++++..+.+++|+  ..|+.+|++  +.++++..+|+++|++++|+++|+++++||.|++
T Consensus         1 ~~~~I~~~g~~~P~~~~~~~~~~~~~~~~~~~i~~~~Gi~~r~~--~~~~~~~~~l~~~a~~~al~~ag~~~~~id~vi~   78 (317)
T 1hnj_A            1 MYTKIIGTGSYLPEQVRTNADLEKMVDTSDEWIVTRTGIRERHI--AAPNETVSTMGFEAATRAIEMAGIEKDQIGLIVV   78 (317)
T ss_dssp             CEEEEEEEEEECCSEEEEHHHHHTTSSCCHHHHHHHHCCCEEEE--CCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEE
T ss_pred             CCcEEEEEEEeCCCceecHHHHHHHhCCCHHHHHHHhCceEEEe--cCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence            368999999999999999999999888888877  467777774  4789999999999999999999999999999999


Q ss_pred             EeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCcc-CCCCC---
Q 013297           81 GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AEGPA---  156 (446)
Q Consensus        81 ~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~~~~---  156 (446)
                      +|+++++..|+.+.+|+..||+   ++++++++.++|+|++.||..|..+|++|.+  ++|||+++|..+. .+..+   
T Consensus        79 g~~~~~~~~~~~a~~v~~~lgl---~~~~~~~v~~aCas~~~al~~A~~~i~~g~~--~~vlv~g~e~~s~~~~~~d~~~  153 (317)
T 1hnj_A           79 ATTSATHAFPSAACQIQSMLGI---KGCPAFDVAAACAGFTYALSVADQYVKSGAV--KYALVVGSDVLARTCDPTDRGT  153 (317)
T ss_dssp             ECSCCSCSSSCHHHHHHHHHTC---CSSCEEEECCGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEECHHHHSCTTCHHH
T ss_pred             EcCCCCCCCCcHHHHHHHHhCC---CCCeEEeeCcccHHHHHHHHHHHHHHHCCCC--CEEEEEEechhcccCCchhccc
Confidence            9999988889999999999997   4478999999999999999999999999966  9999999998632 22222   


Q ss_pred             CccccccceeeeeccCCCcccccccccccccccccccccCC------CCCCcccCChhHHHHHHHHHHHHHHHHHHHhhh
Q 013297          157 RPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNL------ASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEK  230 (446)
Q Consensus       157 ~~t~GdGAvA~Ll~~~~~~~~~~~~~g~~~~~~~df~~p~~------~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~  230 (446)
                      ..+|||||+|+||++.+.-.+.....+++......++.|.+      ...++.++|+..++.+.+.+.+++++++++.  
T Consensus       154 ~~~~GdGA~A~vL~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~aL~~a--  231 (317)
T 1hnj_A          154 IIIFGDGAGAAVLAASEEPGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAAN--  231 (317)
T ss_dssp             HTTBCCEEEEEEEEEESSCSEEEEEEEECGGGGGGEECCCCCSSCTTSCCSCEECHHHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             ceeeccccEEEEEEecCCCceeeEEEEEcCCCCCeEEECCCCCCCCCCCceEEecCHHHHHHHHHHHHHHHHHHHHHc--
Confidence            36799999999998765311110011222211111223331      1234557888888888888888999888886  


Q ss_pred             hhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhh
Q 013297          231 LEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLY  310 (446)
Q Consensus       231 ~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~  310 (446)
                          +++++|||||++|+++.++.+.+.+.|                        |++.++++.         +.     
T Consensus       232 ----gl~~~did~v~~H~~~~~~~d~i~~~l------------------------g~~~~~~~~---------~~-----  269 (317)
T 1hnj_A          232 ----NLDRSQLDWLVPHQANLRIISATAKKL------------------------GMSMDNVVV---------TL-----  269 (317)
T ss_dssp             ----TCCGGGCCEEEECCSCHHHHHHHHHHT------------------------TCCGGGBCC---------CH-----
T ss_pred             ----CCCHHHCCEEEEcCCCHHHHHHHHHHc------------------------CCCHHHhHh---------hH-----
Confidence                799999999999999999999887776                        666554331         12     


Q ss_pred             hhccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEE
Q 013297          311 DAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKL  370 (446)
Q Consensus       311 ~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~  370 (446)
                                 .++||+++||++++|.+++++ +++++|++|++++||+|+++++++++|
T Consensus       270 -----------~~~Gn~~~As~~~~L~~~~~~-~~~~~G~~vll~~~G~G~t~~~~~l~~  317 (317)
T 1hnj_A          270 -----------DRHGNTSAASVPCALDEAVRD-GRIKPGQLVLLEAFGGGFTWGSALVRF  317 (317)
T ss_dssp             -----------HHHCBCGGGHHHHHHHHHHHT-TCSCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred             -----------hhhCcHHHHHHHHHHHHHHHh-CCCCCCCEEEEEEEchhheeEEEEEEC
Confidence                       689999999999999999998 788999999999999999999999986

>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2

Probab=100.00  E-value=3.9e-42  Score=344.71  Aligned_cols=306  Identities=19%  Similarity=0.213  Sum_probs=250.4

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhcCCCccee--EEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEE
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEV   80 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~   80 (446)
                      ++++|.+++.|+|+.+++++++++..+.+++|+  ++|+.+|+  ++.++++..+|+++|++++|+++|+++++||.|++
T Consensus        10 ~~~~I~gig~~~P~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~--~~~~~~~~~~la~~Aa~~al~~ag~~~~~id~vi~   87 (339)
T 1mzj_A           10 RFSRVLGVGSYRPRREVSNKEVCTWIDSTEEWIETRTGIRSRR--IAEPDETIQVMGVAASRRALEHAGVDPAEIDLVVV   87 (339)
T ss_dssp             CEEEEEEEEEECCSCEEEHHHHTTTSSCCHHHHHHHHCCSEEE--CCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEE
T ss_pred             CceEEEEEEEeCCCccccHHHHHHHhCCCHHHHHHhcCceEEE--EeCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence            469999999999999999999999888888887  46788877  44779999999999999999999999999999999


Q ss_pred             EeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCcc-CCC---CC
Q 013297           81 GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AEG---PA  156 (446)
Q Consensus        81 ~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~~---~~  156 (446)
                      +|+++++..|+.+.+|+..||+   +++++++++++|+|++.||..|..+|++|.+  ++|||+++|..+. .++   ..
T Consensus        88 gt~~~~~~~p~~a~~v~~~lgl---~~~~~~~v~~aCas~~~Al~~A~~~i~~G~~--~~vLv~g~e~~s~~~~~~d~~~  162 (339)
T 1mzj_A           88 STMTNFVHTPPLSVAIAHELGA---DNAGGFDLSAACAGFCHALSIAADAVESGGS--RHVLVVATERMTDVIDLADRSL  162 (339)
T ss_dssp             ECSCCCCCSSCHHHHHHHHHTC---TTCEEEEEECGGGHHHHHHHHHHHHHHHSSC--SCEEEEEEEEGGGGSCSSCTTT
T ss_pred             EecCCCCCCChHHHHHHHHhCC---CCccEEEccccchHHHHHHHHHHHHHHCCCC--CEEEEEEEcccccccCcccccc
Confidence            9999988889999999999997   3489999999999999999999999999966  9999999998742 122   23


Q ss_pred             CccccccceeeeeccCCCcccccccccccccccccccc-----cCC------CCCCcccCChhHHHHHHHHHHHHHHHHH
Q 013297          157 RPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYK-----PNL------ASEYPVVDGKLSQTCYLMALDTCYKCLC  225 (446)
Q Consensus       157 ~~t~GdGAvA~Ll~~~~~~~~~~~~~g~~~~~~~df~~-----p~~------~~~~p~~dG~~s~~~yl~~l~~~~~~~~  225 (446)
                      ..+|||||+|+||++.+...+......++.. ..|.++     |..      ...+..++|+..++.+.+.+.+++++++
T Consensus       163 ~~~~GdGA~A~vL~~~~~~~i~~~~~~~~g~-~~~~~~~~g~~p~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL  241 (339)
T 1mzj_A          163 SFLFGDGAGAAVVGPSDVPGIGPVVRGIDGT-GLGSLHMSSSWDQYVEDPSVGRPALVMDGKRVFRWAVADVVPAAREAL  241 (339)
T ss_dssp             TTTBCEEEEEEEEEEESSCCBCCCEEEECGG-GGGGEEESCCHHHHTTCSSSCSCCEEECHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEeccCceEEEEEecCCCCeEEEEEEEcCC-CCCeEEecCCCCCcccccccccceEEeeCHHHHHHHHHHHHHHHHHHH
Confidence            4689999999999976431110000111111 112111     211      1234567888888888888888888888


Q ss_pred             HHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCC-ccccchhHHHHHHh
Q 013297          226 SKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGD-ESYQSRDLEKVSQQ  304 (446)
Q Consensus       226 ~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e-~~~~d~~~~k~~~~  304 (446)
                      ++.      +++++|||||++|+++.++.+.+.++|                        |++.+ +.+.         +
T Consensus       242 ~~a------gl~~~did~v~~H~~~~~~~d~i~~~l------------------------g~~~~~~~~~---------~  282 (339)
T 1mzj_A          242 EVA------GLTVGDLVAFVPHQANLRIIDVLVDRL------------------------GVPEHVVVSR---------D  282 (339)
T ss_dssp             HTT------TCCGGGCSEEEECCSCHHHHHHHHHHH------------------------TCCTTSEECC---------T
T ss_pred             HHc------CCCHHHCCEEEECCCCHHHHHHHHHHh------------------------CCCccceeee---------h
Confidence            775      899999999999999999999988877                        77766 4431         2


Q ss_pred             hhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEEeC
Q 013297          305 LAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSE  372 (446)
Q Consensus       305 ~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~~~  372 (446)
                      +                .++||+++||++++|..++++ +++++|++|++++||+|+++++++++|.+
T Consensus       283 ~----------------~~~Gn~~sAs~~~~L~~~~~~-g~~~~G~~vll~~~G~G~t~~~~~l~~~~  333 (339)
T 1mzj_A          283 A----------------EDTGNTSSASVALALDRLVRS-GAVPGGGPALMIGFGAGLSYAGQALLLPD  333 (339)
T ss_dssp             H----------------HHHCBCTTHHHHHHHHHHHHH-TSSCTTCEEEEEEEETTTEEEEEEEECCC
T ss_pred             h----------------hhcCchHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEchhheeEEEEEEeCC
Confidence            2                689999999999999999998 78899999999999999999999999964

>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A

Probab=100.00  E-value=8.6e-42  Score=348.66  Aligned_cols=307  Identities=17%  Similarity=0.159  Sum_probs=237.2

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhc---CCCcce---------e--EEeecceEEecCCCCC-----------------
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHD---GASKGK---------Y--TIGLGQECMAFCSEVE-----------------   51 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~---g~~~~k---------~--~~Glg~r~~av~~~~E-----------------   51 (446)
                      ..++|.+||.|+|+++|+|+++++..   ..+++|         +  ++||.+|+++  .++|                 
T Consensus        15 ~~~~I~~ig~~~P~~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~--~~~e~~~~~~~~~~~~~p~~~   92 (393)
T 3ov2_A           15 GPATIMAIGTATPPNLYEQSTFPDFYFRVTNSDDKQELKKKFRRMCEKTMVKKRYLH--LTEEILKERPKLCSYKEASFD   92 (393)
T ss_dssp             SCCEEEEEEEECCSCEEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHHHTCCCEEECS--CCHHHHHHSGGGGSSSSCCHH
T ss_pred             CCeEEEEEEeeCCCcccCHHHHHHHHHHhhcccchHHHHHHHHHHHHhcCCceEEee--cChhhhccCcccccCCCCCHH
Confidence            45899999999999999999999874   333332         3  4799999865  3333                 


Q ss_pred             --------CHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCce-eeeeCCcChhHHH
Q 013297           52 --------DVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIE-GVDSTNACYGGTA  122 (446)
Q Consensus        52 --------d~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~-~~di~~aC~gg~~  122 (446)
                              +..+|+++|++++|+++|+++++||.||++|+++ +..|+++.+|+++||+  .+.+. +++++++|+|++.
T Consensus        93 ~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~t~-~~~p~~a~~v~~~LGl--~~~~~~~~~v~~~C~g~~~  169 (393)
T 3ov2_A           93 DRQDIVVEEIPRLAKEAAEKAIKEWGRPKSEITHLVFCSISG-IDMPGADYRLATLLGL--PLTVNRLMIYSQACHMGAA  169 (393)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CCBSCHHHHHHHHHTC--CTTSEEEEEESCCTTHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CCCCCHHHHHHHHcCC--CCCcceeeEEcCccHHHHH
Confidence                    5899999999999999999999999999999999 7799999999999998  44443 8999999999999


Q ss_pred             HHHHHHHHHHcCCCCCCEEEEEEeecCc--cCCCCC--------CccccccceeeeeccCCCcccccccccccccccccc
Q 013297          123 ALFNCVNWVESSSWDGRYGLVVCTDSAV--YAEGPA--------RPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDF  192 (446)
Q Consensus       123 AL~~A~~~l~sg~~~~~~aLVVasD~~~--y~~~~~--------~~t~GdGAvA~Ll~~~~~~~~~~~~~g~~~~~~~df  192 (446)
                      ||.+|..+|++|..  ++||||++|.++  +.++.+        ..+|||||+|+||++++...+..........  ...
T Consensus       170 al~~A~~~i~sg~~--~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~~~~~--~~~  245 (393)
T 3ov2_A          170 MLRIAKDLAENNRG--ARVLVVACEITVLSFRGPNEGDFEALAGQAGFGDGAGAVVVGADPLEGIEKPIYEIAAA--MQE  245 (393)
T ss_dssp             HHHHHHHHHHHSTT--CEEEEEEEECGGGTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCCTTTCCCSEEEEEE--EEE
T ss_pred             HHHHHHHHHHcCCC--CEEEEEEEeccchhccCCcccchhhhcccccccCccEEEEEEecCCCcccCceeEEEec--CcE
Confidence            99999999999965  999999999984  433322        2469999999999987542111000000000  001


Q ss_pred             cccCCCC----------CCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCc-CCCceeeccCcchHHHHHHHHHh
Q 013297          193 YKPNLAS----------EYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSL-SNADYFVFHSPYNKLVQKSFARL  261 (446)
Q Consensus       193 ~~p~~~~----------~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~-~did~~i~H~p~~~~~~~~~~~l  261 (446)
                      ..|....          .+..+ ++..+....+.+++++++++++.      +++. +|+ +|++||+|.+|++.+.++|
T Consensus       246 ~~p~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~------gl~~~~di-~~v~Hq~n~~i~~~v~~~L  317 (393)
T 3ov2_A          246 TVAESQGAVGGHLRAFGWTFYF-LNQLPAIIADNLGRSLERALAPL------GVREWNDV-FWVAHPGNWAIIDAIEAKL  317 (393)
T ss_dssp             ECTTCTTSEEEEEETTEEEEEE-CTTHHHHHHTTSHHHHHHHHGGG------TCCSGGGS-EEEECCCCHHHHHHHHHHH
T ss_pred             EecCCcccCceeeeCCceEEEE-CcHHHHHHHHHHHHHHHHHHHHc------CCCcccCc-EEEECCCChHHHHHHHHHc
Confidence            1121100          01112 24555555666777888887775      7886 888 9999999999999999999


Q ss_pred             hhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHH
Q 013297          262 LFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIH  341 (446)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~  341 (446)
                                              |++.++++.++      .++                +++|||++||+|++|..+++
T Consensus       318 ------------------------gl~~ek~~~s~------~~l----------------~~~GNtssAsip~~L~~~~~  351 (393)
T 3ov2_A          318 ------------------------QLSPDKLSTAR------HVF----------------TEYGNMQSATVYFVMDELRK  351 (393)
T ss_dssp             ------------------------TCCTTTTHHHH------HHH----------------HHHCBCGGGHHHHHHHHHHH
T ss_pred             ------------------------CCCHHHHHHHH------HHH----------------HHhCChHHhHHHHHHHHHHH
Confidence                                    89988764210      124                89999999999999999987


Q ss_pred             h---cCCCCCC---CEEEEEEeccccceeeEEEEEeC
Q 013297          342 N---KHSELDG---KRVVLFSYGSGLTATMFSLKLSE  372 (446)
Q Consensus       342 ~---~~~~~~G---~~vll~syGsG~~~~~~~l~~~~  372 (446)
                      +   .+++++|   |+|+|++||+|++|+++++++.+
T Consensus       352 ~~~~~g~~~~G~~~d~vll~~fG~G~t~~~~ll~~~~  388 (393)
T 3ov2_A          352 RSAVEGRSTTGDGLQWGVLLGFGPGLSIETVVLRSMP  388 (393)
T ss_dssp             HHHHTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECB
T ss_pred             hhhhcCCcCCCCCCCeEEEEEECccceeeeeeeEEcc
Confidence            4   2677889   99999999999999999999986

>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}

Probab=100.00  E-value=6.5e-41  Score=331.02  Aligned_cols=302  Identities=16%  Similarity=0.190  Sum_probs=248.4

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhcCCCccee--EEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEE
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEV   80 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~   80 (446)
                      |+++|.++++|+|+.+++++++++..+.+++|+  +.|+.+|+++  .+ ++..+|+++|++++|+++|+++++||.|++
T Consensus         1 m~~~I~~~g~~~P~~~~~~~~~~~~~~~~~~~i~~~~Gi~~r~~~--~~-~~~~~l~~~a~~~al~~ag~~~~~id~v~~   77 (309)
T 2ebd_A            1 MGTKIIGTGVYLPKNVLTNFDLEKIVDTSDEWITTRTGIKERRIA--KE-ETITYMATQAAKEALREANLSPEELDLIIL   77 (309)
T ss_dssp             CCEEEEEEEEECCSEEEEHHHHHTTSSCCHHHHHHHHCCCEEEEC--SS-CCHHHHHHHHHHHHHHHHTCCGGGCSEEEE
T ss_pred             CceEEEEEEEECCCceEcHHHHHHHcCCCHHHHHHHhCceeeeec--CC-CCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence            468999999999999999999999888887777  3688888865  33 899999999999999999999999999999


Q ss_pred             EeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCcc----CCCCC
Q 013297           81 GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY----AEGPA  156 (446)
Q Consensus        81 ~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y----~~~~~  156 (446)
                      +|.++++..|+.+.+|+..||+   +.++++++.++|+|++.||..|..+|++|.+  ++|||+++|..+.    .+...
T Consensus        78 ~~~~~~~~~~~~a~~v~~~lgl---~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~--~~vlv~g~e~~s~~~~~~~~~~  152 (309)
T 2ebd_A           78 ATLTPQKRFPSTACLVQAQLKA---KGVYAFDISAACSGFIYALDIADSFIKSGKA--KNVLVIGAEKLSEAVDWEDRST  152 (309)
T ss_dssp             ECSSCSSSSSCHHHHHHHHHTC---TTCEEEEEECGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEEEGGGTCCTTCTTT
T ss_pred             EcCCCCCCCCcHHHHHHHHhCC---CCceEEecCccchHHHHHHHHHHHHHHCCCC--CEEEEEEecccccccCccchhh
Confidence            9999988889999999999998   3478999999999999999999999999966  9999999998742    12223


Q ss_pred             CccccccceeeeeccCCCc-ccccccccccccccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCC
Q 013297          157 RPTGGAAAVVMLVGPDAPV-AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQ  235 (446)
Q Consensus       157 ~~t~GdGAvA~Ll~~~~~~-~~~~~~~g~~~~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~  235 (446)
                      ..++||||+|+||++.+.. .+.....++.......+..|.  ..++.++|+..+..+.+.+.+++++++++.      +
T Consensus       153 ~~~~gdGaaA~vL~~~~~~~~i~~~~~~~~g~~~~~~~~p~--~~~~~~~g~~~~~~~~~~~~~~i~~al~~a------g  224 (309)
T 2ebd_A          153 CVLFGDGAGAVVVTRSEDKSDILATRMYAEGSLEELLHADN--CGYIRMKGRELFKVAVRSMEEVCREVLEKA------G  224 (309)
T ss_dssp             TTTBCEEEEEEEEEECSSSCEEEEEEEEECGGGGGGEEECT--TCCEEECHHHHHHHHHHHHHHHHHHHHHHH------T
T ss_pred             ccccccccEEEEEEecCCCCceeEEEEEecCCccceeEeCC--CCeEEEccHHHHHHHHHHHHHHHHHHHHHc------C
Confidence            4689999999999987641 111101112221112233442  234567888888888888889999988887      7


Q ss_pred             CCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccC
Q 013297          236 FSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQ  315 (446)
Q Consensus       236 ~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~  315 (446)
                      ++++|||++++|+++.++.+.+.+.+                        |++.++.+.         +.          
T Consensus       225 l~~~did~~~~H~~~~~~~~~~~~~l------------------------g~~~~~~~~---------~~----------  261 (309)
T 2ebd_A          225 VKPEEVSLVIPHQANVRIINALAEKL------------------------NIPKEKVFV---------NI----------  261 (309)
T ss_dssp             CCGGGCSEEEECCSCHHHHHHHHHHT------------------------TCCGGGBCC---------CH----------
T ss_pred             CCHHHCCEEEEcCCCHHHHHHHHHHh------------------------CCCHHHhhh---------hH----------
Confidence            99999999999999999999877766                        666554331         12          


Q ss_pred             CCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEE
Q 013297          316 PSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKL  370 (446)
Q Consensus       316 ~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~  370 (446)
                            .++||+++||++++|.+++++ +++++|+++++++||+|+++++++++|
T Consensus       262 ------~~~Gh~~~As~~~~L~~~~~~-g~~~~G~~~l~~~~G~G~~~~~~~l~~  309 (309)
T 2ebd_A          262 ------QKYGNTSAASIPIALHEAIKE-GKVKRGDLILMTAMGGGLTWGAVLLRY  309 (309)
T ss_dssp             ------HHHCBCGGGHHHHHHHHHHHT-TCCCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred             ------hhhcchHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEchhhhhEEEEEEC
Confidence                  689999999999999999998 788899999999999999999999986

>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A

Probab=100.00  E-value=3.4e-41  Score=333.76  Aligned_cols=305  Identities=18%  Similarity=0.242  Sum_probs=248.9

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhcCCCccee--EEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEE
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEV   80 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~   80 (446)
                      |+++|.++++|+|+++++++++++..+.+++|+  ++|+++|++  ..++++..+|+++|++++|+++|+++++||.|++
T Consensus         1 m~~~I~~~g~~~P~~~~~~~~~~~~~~~~~~~i~~~~gi~~r~~--~~~~~~~~~l~~~a~~~al~~ag~~~~~id~vi~   78 (313)
T 1zow_A            1 MNVGIKGFGAYAPEKIIDNAYFEQFLDTSDEWISKMTGIKERHW--ADDDQDTSDLAYEASVKAIADAGIQPEDIDMIIV   78 (313)
T ss_dssp             CCEEEEEEEEECCSCEEEGGGGGGTSSCCHHHHHHHHCCSEEEC--CCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEE
T ss_pred             CceEEEEEEEECCCccccHHHHHHhcCCCHHHHHHhhCceEEEe--cCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence            468999999999999999999999888888877  478888874  4689999999999999999999999999999999


Q ss_pred             EeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCc-cCCCCC---
Q 013297           81 GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-YAEGPA---  156 (446)
Q Consensus        81 ~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-y~~~~~---  156 (446)
                      +|+++++..|+++.+|+..||+   ++++++++.++|+|++.||..|..+|++|.+  ++|||+++|..+ ..++.+   
T Consensus        79 ~~~~~~~~~~~~a~~v~~~lgl---~~~~~~~v~~aCas~~~al~~A~~~i~~g~~--~~vLv~g~e~~s~~~~~~d~~~  153 (313)
T 1zow_A           79 ATATGDMPFPTVANMLQERLGT---GKVASMDQLAACSGFMYSMITAKQYVQSGDY--HNILVVGADKLSKITDLTDRST  153 (313)
T ss_dssp             ECSSCSCSSSCHHHHHHHHHTC---CSCCEEEEECGGGHHHHHHHHHHHHHHTTSC--SCEEEEEEEEGGGTCCTTCHHH
T ss_pred             EcCCCCCCCCcHHHHHHHHhCC---CCCcEEEECCcCHHHHHHHHHHHHHHHCCCC--CEEEEEEEcccccccCcccccc
Confidence            9999988889999999999997   4478999999999999999999999999966  999999999863 222222   


Q ss_pred             CccccccceeeeeccCCC-cccccccccccccccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCC
Q 013297          157 RPTGGAAAVVMLVGPDAP-VAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQ  235 (446)
Q Consensus       157 ~~t~GdGAvA~Ll~~~~~-~~~~~~~~g~~~~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~  235 (446)
                      ..+|||||+|+||++.+. ..+......++......++.|.. ..+..++|+..+..+.+.+.+++++++++.      +
T Consensus       154 ~~~~gdGa~A~vl~~~~~~~~i~~~~~~~~g~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~i~~al~~a------g  226 (313)
T 1zow_A          154 AVLFGDGAGAVIIGEVSEGRGIISYEMGSDGTGGKHLYLDKD-TGKLKMNGREVFKFAVRIMGDASTRVVEKA------N  226 (313)
T ss_dssp             HTTBCEEEEEEEEEECSTTCEEEEEEEEECGGGGGGEEECTT-TCCEEECHHHHHHHHHHHHHHHHHHHHHHT------T
T ss_pred             eeeeccceEEEEEEecCCCCceeEEEEEEcCCCcCeEEecCC-CCeeEeccHHHHHHHHHHHHHHHHHHHHHc------C
Confidence            367999999999998753 11110001111111112344431 123446787777777788888888888876      7


Q ss_pred             CCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccC
Q 013297          236 FSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQ  315 (446)
Q Consensus       236 ~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~  315 (446)
                      ++++|||++++|+++.++.+.+.+.|                        |++.++.+.         +.          
T Consensus       227 l~~~did~~~~H~~~~~~~d~~~~~l------------------------g~~~~~~~~---------~~----------  263 (313)
T 1zow_A          227 LTSDDIDLFIPHQANIRIMESARERL------------------------GISKDKMSV---------SV----------  263 (313)
T ss_dssp             CCGGGCSEEEECCSCHHHHHHHHHHH------------------------TCCGGGBCC---------CH----------
T ss_pred             CCHHHCCEEEEcCCCHHHHHHHHHHh------------------------CCCHHHHHH---------hH----------
Confidence            99999999999999999999988777                        666554431         12          


Q ss_pred             CCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEEe
Q 013297          316 PSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLS  371 (446)
Q Consensus       316 ~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~~  371 (446)
                            .++||+++||++++|.+++++ +++++|+++++++||+|+++++++++|.
T Consensus       264 ------~~~Gh~~~as~~~~L~~~~~~-~~~~~g~~vl~~~~G~G~t~~~~~l~~~  312 (313)
T 1zow_A          264 ------NKYGNTSAASIPLSIDQELKN-GKLKDDDTIVLVGFGGGLTWGAMTIKWG  312 (313)
T ss_dssp             ------HHHCBCGGGHHHHHHHHHHHT-TCCCTTCEEEEEEEETTTEEEEEEEECC
T ss_pred             ------hhhCchHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEchhhhheEEEEEeC
Confidence                  689999999999999999998 7888999999999999999999999984

>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}

Probab=100.00  E-value=3.5e-41  Score=349.60  Aligned_cols=316  Identities=17%  Similarity=0.198  Sum_probs=242.2

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhcCC----C--cce---e--EEeecceEEecCCCC-------------------CC
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHDGA----S--KGK---Y--TIGLGQECMAFCSEV-------------------ED   52 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~----~--~~k---~--~~Glg~r~~av~~~~-------------------Ed   52 (446)
                      +++.|.+|++|+|+++|+|+++++..+.    .  .+|   +  ++||.+|+++..+..                   ++
T Consensus        30 ~~v~I~gigt~lP~~~v~n~el~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~p~~~~~~~ps~~~r~~~~~~~  109 (465)
T 3e1h_A           30 LGLSITGLGVQYPPYSLGPDAIDILSKRYHPESPAMKKVLAINRYTGIDQRSSIGNPDHPLVNKPNPPTVKELHEVFMSD  109 (465)
T ss_dssp             CCEEEEEEEEECCSSCCBCTHHHHHTCSSSCCCHHHHHHHHHTTTSCCCCBCCSSCTTCGGGSSSSCCCHHHHHHHHHHH
T ss_pred             CCEEEEEEEEECCCcEEcHHHHHHHHHHhcccchhHHHHHHHHHhcCCceEEEeecccCcccccccCCCHHHHHHHHHhh
Confidence            6899999999999999999999776432    1  233   3  479999997643211                   23


Q ss_pred             HHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeee-CCcChhHHHHHHHHHHHH
Q 013297           53 VISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDS-TNACYGGTAALFNCVNWV  131 (446)
Q Consensus        53 ~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di-~~aC~gg~~AL~~A~~~l  131 (446)
                      +.+|+++|+++||+++|++++|||+||++|++ ++..|+++.+|+++||+  .+.+.+||+ +++|+|+++||.+|..+|
T Consensus       110 a~~La~~Aa~~AL~~agi~~~dId~li~~t~t-~~~~P~~a~~v~~~LGl--~~~~~~~dv~~~~Csgg~~AL~~A~~~i  186 (465)
T 3e1h_A          110 GVPLAVEASRKAMAEARLVPAQITHMVSTTCT-DSANPGYDHYVAKELGL--SDRLEKVLLHGIGCSGGLAALRTAANLC  186 (465)
T ss_dssp             THHHHHHHHHHHHHHHTCCGGGCCEEEEECSS-CCCSSCHHHHHHHHHTC--CTTCEEEEECSCGGGHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeC-CCCCCcHHHHHHHHhCC--CCCeeEEEecCCcchHHHHHHHHHHHHH
Confidence            57999999999999999999999999999999 57799999999999998  445558999 699999999999999999


Q ss_pred             Hc----CCCCCCEEEEEEeecCc-cCC------------CCCCccccccceeeeeccCCCc-cccc---cccccccc---
Q 013297          132 ES----SSWDGRYGLVVCTDSAV-YAE------------GPARPTGGAAAVVMLVGPDAPV-AFES---KLRGSHMS---  187 (446)
Q Consensus       132 ~s----g~~~~~~aLVVasD~~~-y~~------------~~~~~t~GdGAvA~Ll~~~~~~-~~~~---~~~g~~~~---  187 (446)
                      ++    |..  ++||||++|+.+ +.+            .....+|||||+|+||++++.- ..+.   .+.+....   
T Consensus       187 ~a~~~~G~~--~~vLVvg~E~~S~~~~~~~~~~~~~~~d~~t~~LFGDGAaAvVl~~~~~~~~~~~~~~~l~~~~~~~~p  264 (465)
T 3e1h_A          187 LGHTARGKP--ARILVLALEVSTTMVRSELESIDALQETRIGIALFSDCASAVILSNGIGEAPGKPAIYDLLGWENRVIP  264 (465)
T ss_dssp             HHHHHTTCC--CEEEEEEEECCGGGHHHHHHHHHHHTCCCCHHHHBCCEEEEEEEECCTTCCTTCCCSEEEEEEEEEECT
T ss_pred             hcccccCCC--CEEEEEEEeecchhcCcccccccccccccccccccccceeEEEEEccCCCccccccceeeccceEEEec
Confidence            97    855  999999999984 211            1223679999999999987431 0000   11111110   


Q ss_pred             ---ccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhh-hhCCCCCcCCCceeeccCcchHHHHHHHHHhhh
Q 013297          188 ---HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEK-LEGKQFSLSNADYFVFHSPYNKLVQKSFARLLF  263 (446)
Q Consensus       188 ---~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~-~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~  263 (446)
                         +... |... ...+..++|+..++...+.+++++++++++... +.+++++++||||+ +||+|.+|++.+.++|  
T Consensus       265 ~~~~~~~-~~~~-~~g~~~~~g~~V~~~a~~~v~~~i~~~L~~~g~~L~~agl~~~DId~~-~Hqan~rIl~~v~~~L--  339 (465)
T 3e1h_A          265 DSEHDLG-FDVD-PMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQKPADFDWA-MHPGGATILSGAESAM--  339 (465)
T ss_dssp             TCTTTEE-EEEE-TTEEEEEECTTHHHHHHHHHHHHHHHHHHHHGGGSCTTSCSGGGSEEE-ECCSSHHHHHHHHHHH--
T ss_pred             CCccccC-cccc-CCCceEecChHHHHHHHHHHHHHHHHHHHhccccccccCCCHHHceEE-ecCCChHHHHHHHHHh--
Confidence               1111 1111 112345678888888888899999999887421 13357899999977 9999999999999998  


Q ss_pred             hhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhc
Q 013297          264 NDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNK  343 (446)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~  343 (446)
                                            |++.+++..+      ..++                ++||||++||+|++|..++++.
T Consensus       340 ----------------------gl~~ek~~~s------~~~l----------------~~yGNtsSASip~aL~~~~~~~  375 (465)
T 3e1h_A          340 ----------------------GLTPEHMRAS------YDRY----------------INHGNSSSATIFSVLNRLREKD  375 (465)
T ss_dssp             ----------------------TCCGGGGHHH------HHHH----------------HHHCBCGGGHHHHHHHHHTSTT
T ss_pred             ----------------------CcCHHHhHHH------HHHH----------------hcceechHhHHHHHHHHHHHhc
Confidence                                  8888765321      1123                7999999999999999998862


Q ss_pred             -CCCCCC----CEEEEEEeccccceeeEEEEEeC
Q 013297          344 -HSELDG----KRVVLFSYGSGLTATMFSLKLSE  372 (446)
Q Consensus       344 -~~~~~G----~~vll~syGsG~~~~~~~l~~~~  372 (446)
                       +++++|    |+|+|++||+|++|++++++|..
T Consensus       376 ~g~l~~Gg~~~d~vll~gfG~Glt~~~~llr~~~  409 (465)
T 3e1h_A          376 MDALAPGGKVKEYVVGCAFGPGINVEMCMLKRRM  409 (465)
T ss_dssp             TTSCSSSSCCCSEEEEEEEETTTEEEEEEEEECC
T ss_pred             ccccCCCCCCCCEEEEEEEhHHHhhhheeeEEec
Confidence             356666    99999999999999999999976

>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A

Probab=100.00  E-value=1.9e-41  Score=346.39  Aligned_cols=310  Identities=16%  Similarity=0.154  Sum_probs=247.1

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhcCCCc---------cee--EEeecceEE-ecCCC--------------------C
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHDGASK---------GKY--TIGLGQECM-AFCSE--------------------V   50 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~---------~k~--~~Glg~r~~-av~~~--------------------~   50 (446)
                      |+++|.++++|+|+++++|+++++..+...         +|+  ++||++|++ +.+++                    +
T Consensus        31 ~~~~I~~ig~~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~a~~~~~~~~~~~~~p~~~~~r~~~~~  110 (393)
T 1ted_A           31 TVAVIEGLATGTPRRVVNQSDAADRVAELFLDPGQRERIPRVYQKSRITTRRMAVDPLDAKFDVFRREPATIRDRMHLFY  110 (393)
T ss_dssp             CEEEEEEEEEECCSCEEEHHHHHHHHHTC----CCTTHHHHHHHTSCCSEEECSSCTTSTTHHHHTTCSSCHHHHHHHHH
T ss_pred             cccEEEEeeeeCCCcccCHHHHHHHHHHhcccccHHHHHHHHHHhCCcCcceeeecChHhcccccccCCCCHHHHHHHHh
Confidence            468999999999999999999999877543         344  579999986 53210                    4


Q ss_pred             CCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeee-CCcChhHHHHHHHHHH
Q 013297           51 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDS-TNACYGGTAALFNCVN  129 (446)
Q Consensus        51 Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di-~~aC~gg~~AL~~A~~  129 (446)
                      ++..+|+++|++++|+++|+++++||.||++|+++ +..|+++.+|+..||+  ...+.++++ +++|+|++.||..|..
T Consensus       111 ~~~~~la~~Aa~~aL~~agl~~~~Id~vi~~t~~~-~~~p~~a~~v~~~lGl--~~~~~~~~v~~~aCas~~~Al~~A~~  187 (393)
T 1ted_A          111 EHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTG-FIAPGVDVAIVKELGL--SPSISRVVVNFMGCAAAMNALGTATN  187 (393)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSC-CCSSCHHHHHHHHHTC--CTTCEEEEEESCGGGHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CccChHHHHHHHHcCc--CCCcceeEeccchhHHHHHHHHHHHH
Confidence            78899999999999999999999999999999999 6689999999999998  556788998 8999999999999999


Q ss_pred             HHHcCCCCCCEEEEEEeecCcc-CCC-CC------CccccccceeeeeccCCCc-----ccccccccccc---cc--ccc
Q 013297          130 WVESSSWDGRYGLVVCTDSAVY-AEG-PA------RPTGGAAAVVMLVGPDAPV-----AFESKLRGSHM---SH--AYD  191 (446)
Q Consensus       130 ~l~sg~~~~~~aLVVasD~~~y-~~~-~~------~~t~GdGAvA~Ll~~~~~~-----~~~~~~~g~~~---~~--~~d  191 (446)
                      +|++|..  ++|||+++|..+. .++ .+      ..+|||||+|+||++.+..     .+ ..+.+..+   .+  ..+
T Consensus       188 ~i~~G~~--~~vLv~g~e~~s~~~~~~~~r~~~~~~~lfGDGA~A~vL~~~~~~~~~~~~~-~~i~~~~~~~~~d~~~~~  264 (393)
T 1ted_A          188 YVRAHPA--MKALVVCIELCSVNAVFADDINDVVIHSLFGDGCAALVIGASQVQEKLEPGK-VVVRSSFSQLLDNTEDGI  264 (393)
T ss_dssp             HHHHSTT--CEEEEEEEEECGGGCCCCSSHHHHHHHHHBCEEEEEEEEEEECTTSCCCTTC-EEEEEEEEEECTTCTTSE
T ss_pred             HHHcCCC--CEEEEEEEEeccccCCCCCCHHHhhhhhhhcCccEEEEEecCCCccccCcce-eeeeccceEEcCCchhhc
Confidence            9999966  9999999998742 221 22      3579999999999876521     00 01122111   11  112


Q ss_pred             ccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhcccccc
Q 013297          192 FYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNAS  271 (446)
Q Consensus       192 f~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~  271 (446)
                      .|++. ...+..++|+..+..+.+.+.+++++++++.      +++++|||+|++||++.++++.+.++|          
T Consensus       265 ~~~~~-~~g~~~~~g~~v~~~~~~~~~~~i~~aL~~a------gl~~~dId~~~~H~~~~~i~d~~~~~l----------  327 (393)
T 1ted_A          265 VLGVN-HNGITCELSENLPGYIFSGVAPVVTEMLWDN------GLQISDIDLWAIHPGGPKIIEQSVRSL----------  327 (393)
T ss_dssp             EEEEE-TTEEEEEECTTHHHHHHHHHHHHHHHHHHHT------TCCGGGCSCEEECCSCHHHHHHHHHHH----------
T ss_pred             cceec-CCCeEEecCchHHHHHHHHHHHHHHHHHHHc------CCCHhHCCEEEECCCcHHHHHHHHHHc----------
Confidence            33322 1123345787777778888899999998886      899999999999999999999998888          


Q ss_pred             chhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCC-CCCC
Q 013297          272 SVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSE-LDGK  350 (446)
Q Consensus       272 ~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~-~~G~  350 (446)
                                    |++.++...+      ..++                +++||+++||++++|.+++++ +++ ++|+
T Consensus       328 --------------gl~~~k~~~s------~~~~----------------~~~GNt~sAsi~~~L~~~~~~-g~~~~~Gd  370 (393)
T 1ted_A          328 --------------GISAELAAQS------WDVL----------------ARFGNMLSVSLIFVLETMVQQ-AESAKAIS  370 (393)
T ss_dssp             --------------TCCGGGGHHH------HHHH----------------HHHCBCTHHHHHHHHHHHHHS-CSSSSSSE
T ss_pred             --------------CCCHHHHHHH------HHHH----------------HhhCCchHhHHHHHHHHHHhc-CccCCCCC
Confidence                          8887764310      1234                899999999999999999998 777 4999


Q ss_pred             EEEEEEeccccceeeEEEEEeC
Q 013297          351 RVVLFSYGSGLTATMFSLKLSE  372 (446)
Q Consensus       351 ~vll~syGsG~~~~~~~l~~~~  372 (446)
                      +|++++||+|+++++++++|..
T Consensus       371 ~vll~~~G~G~t~~~~~l~~~~  392 (393)
T 1ted_A          371 TGVAFAFGPGVTVEGMLFDIIR  392 (393)
T ss_dssp             EEEEEEEETTTEEEEEEEEECC
T ss_pred             eEEEEEeccchhhhhhheeecc
Confidence            9999999999999999999964

>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A

Probab=100.00  E-value=1.6e-40  Score=331.97  Aligned_cols=306  Identities=18%  Similarity=0.217  Sum_probs=247.0

Q ss_pred             eeEEeEEEEecCCccccHHHHHHhcCCCccee--EEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEE
Q 013297            4 NVGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVG   81 (446)
Q Consensus         4 ~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~   81 (446)
                      +++|.+++.|+|+.+++++++++..+.+++|+  ++|+.+|+++  .++++..+|+++|++++|+++|+++++||.|+++
T Consensus        12 ~~~I~g~g~~~P~~~~~~~~~~~~~~~~~~~i~~~~gi~~r~~~--~~~~~~~~la~~A~~~al~~ag~~~~~id~vi~~   89 (335)
T 1u6e_A           12 SVGLLSVGAYRPERVVTNDEICQHIDSSDEWIYTRTGIKTRRFA--ADDESAASMATEACRRALSNAGLSAADIDGVIVT   89 (335)
T ss_dssp             CEEEEEEEEECCSEEEEHHHHTTSSSCCHHHHHHHHCCSEEEEC--CTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEE
T ss_pred             ceEEEEEEEECCCceecHHHHHHHhCCCHHHHHHhcCCceEeec--CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence            68999999999999999999999888877777  4688888754  6789999999999999999999999999999999


Q ss_pred             eccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCcc-CC---CCCC
Q 013297           82 SETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AE---GPAR  157 (446)
Q Consensus        82 T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~---~~~~  157 (446)
                      |.++++..|+.+.+|+..||+   ++++++++.++|+|++.||..|..+|++|.+  ++|||+++|..+. .+   ....
T Consensus        90 t~~~~~~~~~~a~~v~~~lgl---~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~--~~vLv~g~e~~s~~~~~~d~~~~  164 (335)
T 1u6e_A           90 TNTHFLQTPPAAPMVAASLGA---KGILGFDLSAGAAGFGYALGAAADMIRGGGA--ATMLVVGTEKLSPTIDMYDRGNC  164 (335)
T ss_dssp             CSCCCCSSSCHHHHHHHHHTC---TTSEEEEEECGGGHHHHHHHHHHHHHHHTSC--SSEEEEEEEECGGGCCTTCTTTT
T ss_pred             cCCCCCCCChHHHHHHHHhCC---CCCcEeeeccccHHHHHHHHHHHHHHHcCCC--CEEEEEEEcccccccCccccccc
Confidence            999988889999999999997   4689999999999999999999999999966  9999999998742 22   2345


Q ss_pred             ccccccceeeeeccCCCcccccccccccccccccc--------cc--cCCCCCCcccCChhHHHHHHHHHHHHHHHHHHH
Q 013297          158 PTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDF--------YK--PNLASEYPVVDGKLSQTCYLMALDTCYKCLCSK  227 (446)
Q Consensus       158 ~t~GdGAvA~Ll~~~~~~~~~~~~~g~~~~~~~df--------~~--p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~  227 (446)
                      .+|||||+|+||++.+.-.+.....+++......+        |+  |.....+..++|+..+..+.+.+.+++++++++
T Consensus       165 ~~~gDGA~A~vl~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~  244 (335)
T 1u6e_A          165 FIFADGAAAVVVGETPFQGIGPTVAGSDGEQADAIRQDIDWITFAQNPSGPRPFVRLEGPAVFRWAAFKMGDVGRRAMDA  244 (335)
T ss_dssp             TTBCEEEEEEEEEECSSCCBCCCEEEECGGGGGGEEESSCHHHHHTSTTSCCCCEEECHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEeccccEEEEEEecCCCCeeEEEEEEcCCcccceeecCCccCcCCCccCccceEEEcCHHHHHHHHHHHHHHHHHHHHH
Confidence            78999999999998753111111112211111011        11  111112344677766666667788888888888


Q ss_pred             hhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCC-ccccchhHHHHHHhhh
Q 013297          228 YEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGD-ESYQSRDLEKVSQQLA  306 (446)
Q Consensus       228 ~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e-~~~~d~~~~k~~~~~~  306 (446)
                      .      +++++|||++++|+++.++.+.+.+.|                        |++.+ +.+.         ++ 
T Consensus       245 a------gl~~~dId~~~~H~~~~~~~~~~~~~l------------------------g~~~~~~~~~---------~~-  284 (335)
T 1u6e_A          245 A------GVRPDQIDVFVPHQANSRINELLVKNL------------------------QLRPDAVVAN---------DI-  284 (335)
T ss_dssp             H------TCCGGGCCEEEECCSCHHHHHHHHHHH------------------------TCCTTCEECC---------TH-
T ss_pred             c------CCCHHHCCEEEECCCCHHHHHHHHHHc------------------------CCCchhhhhh---------hh-
Confidence            6      799999999999999999999998887                        77665 3221         12 


Q ss_pred             hhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEEeC
Q 013297          307 KPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSE  372 (446)
Q Consensus       307 ~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~~~  372 (446)
                                     .++||+++||++++|.+++++ +++++|+++++++||+|+++++++++|.+
T Consensus       285 ---------------~~~Gnt~sAs~~~~L~~~~~~-~~~~~g~~~l~~~~G~G~t~~~~vl~~~~  334 (335)
T 1u6e_A          285 ---------------EHTGNTSAASIPLAMAELLTT-GAAKPGDLALLIGYGAGLSYAAQVVRMPK  334 (335)
T ss_dssp             ---------------HHHCBCGGGHHHHHHHHHHHH-TSSCTTCEEEEEEEETTTEEEEEEEECCC
T ss_pred             ---------------hhhCcHHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEehhheeEEEEEEeCC
Confidence                           689999999999999999998 77889999999999999999999999854

>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2

Probab=100.00  E-value=2.1e-40  Score=329.43  Aligned_cols=303  Identities=20%  Similarity=0.208  Sum_probs=246.7

Q ss_pred             eEEeEEEEecCCccccHHHHHHhcCCCccee--EEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEe
Q 013297            5 VGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGS   82 (446)
Q Consensus         5 vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T   82 (446)
                      ++|.++++|+|+.+++++++++..+.+++|+  ++|+.+|++  ++++++..+|+++|++++|+++|+++++||.|+++|
T Consensus         2 ~~I~~~g~~~P~~~~~~~~~~~~~~~~~~~i~~~~Gi~~r~~--~~~~~~~~~la~~a~~~al~~ag~~~~~id~vi~~~   79 (322)
T 1ub7_A            2 SGILALGAYVPERVMTNADFEAYLDTSDEWIVTRTGIKERRV--AAEDEYTSDLAFKAVEDLLRRHPGALEGVDAVIVAT   79 (322)
T ss_dssp             CEEEEEEEECCSEEEEHHHHHTTSSCCHHHHHHHTCCCEEEE--CCTTCCHHHHHHHHHHHHHHHSTTTTTTEEEEEEEC
T ss_pred             cEEEEEEEECCCceecHHHHHHHhCCCHHHHHHhcCceEEee--cCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence            6999999999999999999999888888887  367777774  477999999999999999999999999999999999


Q ss_pred             ccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCcc-CCCCC---Cc
Q 013297           83 ETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AEGPA---RP  158 (446)
Q Consensus        83 ~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~~~~---~~  158 (446)
                      +++++..|+.+.+|+..||+    ++++++++++|+|++.||..|..+|++|.+  +++||+++|..+. .+..+   ..
T Consensus        80 ~~~~~~~~~~a~~v~~~lgl----~~~~~~v~~aCas~~~al~~A~~~i~~g~~--~~vlv~g~e~~s~~~~~~d~~~~~  153 (322)
T 1ub7_A           80 NTPDALFPDTAALVQARFGL----KAFAYDLLAGCPGWIYALAQAHALVEAGLA--QKVLAVGAEALSKIIDWNDRATAV  153 (322)
T ss_dssp             SSCSEEESCHHHHHHHHTTC----CCEEEEEECSTTHHHHHHHHHHHHHHTTSC--SEEEEEEEECGGGTSCTTCHHHHT
T ss_pred             CCCCCCCCcHHHHHHHHhCC----CCEEEeeCccchHHHHHHHHHHHHHHcCCC--CEEEEEEechhccccChhhcccce
Confidence            99988788999999999996    578999999999999999999999999966  9999999998743 22222   35


Q ss_pred             cccccceeeeeccCCC-cccccccccccccccccccccCCCC---------CCcccCChhHHHHHHHHHHHHHHHHHHHh
Q 013297          159 TGGAAAVVMLVGPDAP-VAFESKLRGSHMSHAYDFYKPNLAS---------EYPVVDGKLSQTCYLMALDTCYKCLCSKY  228 (446)
Q Consensus       159 t~GdGAvA~Ll~~~~~-~~~~~~~~g~~~~~~~df~~p~~~~---------~~p~~dG~~s~~~yl~~l~~~~~~~~~~~  228 (446)
                      +|||||+|+||++.+. ..+......++......++.|.+++         .+..++|+..++.+.+.+.+++++++++.
T Consensus       154 ~~GdGA~A~vL~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~a  233 (322)
T 1ub7_A          154 LFGDGGGAAVVGKVREGYGFRSFVLGADGTGAKELYHACVAPRLPDGTSMKNRLYMNGREVFKFAVRVMNTATLEAIEKA  233 (322)
T ss_dssp             TBCCEEEEEEEECCCTTCEEEEEEEEECGGGCTTEEEESSCSBCTTSCBCCSSCEECHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eeccccEEEEEEecCCCCceeEEEEEEecCCCCeEEeCCCCCCCCccccccceEEecCHHHHHHHHHHHHHHHHHHHHHc
Confidence            7999999999998753 1111001111111111122332221         23456888888888888899999998887


Q ss_pred             hhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhh
Q 013297          229 EKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKP  308 (446)
Q Consensus       229 ~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~  308 (446)
                            +++++|||++++|+++.++.+.+.+.|                        |++.++++.         +.   
T Consensus       234 ------gl~~~did~~~~H~~~~~~~d~~~~~l------------------------g~~~~~~~~---------~~---  271 (322)
T 1ub7_A          234 ------GLTPEDIRLFVPHQANLRIIDAARERL------------------------GLPWERVAV---------NV---  271 (322)
T ss_dssp             ------TCCGGGCSEEEECCSCHHHHHHHHHTT------------------------TCCGGGBCC---------CH---
T ss_pred             ------CCCHHHCCEEEEcCCCHHHHHHHHHHc------------------------CCCHHHHHH---------HH---
Confidence                  799999999999999999999877665                        666554331         12   


Q ss_pred             hhhhccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEEe
Q 013297          309 LYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLS  371 (446)
Q Consensus       309 ~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~~  371 (446)
                                   .++||+++||++++|..++++ +++++|+++++.|||+|.++++++++|.
T Consensus       272 -------------~~~Gh~~~As~~~~l~~~l~~-g~~~~g~~~l~~~~G~G~~~~~~vl~~~  320 (322)
T 1ub7_A          272 -------------DRYGNTSTASIPLALKEAVDA-GRIREGDHVLLVSFGAGLTWAAAVLTWG  320 (322)
T ss_dssp             -------------HHHCBCGGGHHHHHHHHHHHH-TSSCTTCEEEEEEEETTTEEEEEEEECC
T ss_pred             -------------HhhCcHHHHHHHHHHHHHHHh-CCCCCCCEEEEEEEChhheeEEEEEEeC
Confidence                         689999999999999999998 7888999999999999999999999984

>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A

Probab=100.00  E-value=2.9e-40  Score=336.69  Aligned_cols=309  Identities=19%  Similarity=0.246  Sum_probs=223.7

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhcC---CCcc---------ee--EEeecceEEecCCCCC-----------------
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHDG---ASKG---------KY--TIGLGQECMAFCSEVE-----------------   51 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g---~~~~---------k~--~~Glg~r~~av~~~~E-----------------   51 (446)
                      .++.|.+||.|+|+++|+|+++++..+   .+.+         ++  ++||.+|+++.  ++|                 
T Consensus         9 ~~~~I~~ig~~~P~~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~--~~e~~~~~~~~~~~~~p~~~   86 (387)
T 3oit_A            9 GLAAVLAIGTANPPNCVTQEEIPDFYFRVTNSDHLTALKDKFKRICQEMGVQRRYLHH--TEEMLSAHPEFVDRDAPSLD   86 (387)
T ss_dssp             SCCEEEEEEEECCSEEEETTTHHHHHHHHTTCTTCHHHHHHHHHHHHTSSCCEEEESC--CHHHHHHCGGGTCTTSCCHH
T ss_pred             CCeEEEEEEeeCCCceecHHHHHHHHHHHhCccchHHHHHHHHHHHHhcCcceeeeec--CHHHhccCccccccCCCCHH
Confidence            468999999999999999999998752   1222         33  47999999763  333                 


Q ss_pred             --------CHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCc-eeeeeCCcChhHHH
Q 013297           52 --------DVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDI-EGVDSTNACYGGTA  122 (446)
Q Consensus        52 --------d~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~-~~~di~~aC~gg~~  122 (446)
                              +..+|+++|++++|+++|+++++||.||++|+++ +..|+++.+|+++||+  .+.+ ++++++++|+|++.
T Consensus        87 ~r~~~~~~~~~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~-~~~p~~a~~v~~~LGl--~~~~~~~~~~~~~C~~~~~  163 (387)
T 3oit_A           87 ARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSG-AHVPGVDFRLVPLLGL--RPSVRRTMLHLNGCFAGCA  163 (387)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CEESCHHHHHHHHHTC--CTTCEEEEEECCGGGHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCC-CCcccHHHHHHHHhCC--CCCcceeeEECchhHHHHH
Confidence                    6899999999999999999999999999999999 6789999999999998  4455 38999999999999


Q ss_pred             HHHHHHHHHHcCCCCCCEEEEEEeecCc--cCCCCC--------CccccccceeeeeccCCCcccc--cccccccc----
Q 013297          123 ALFNCVNWVESSSWDGRYGLVVCTDSAV--YAEGPA--------RPTGGAAAVVMLVGPDAPVAFE--SKLRGSHM----  186 (446)
Q Consensus       123 AL~~A~~~l~sg~~~~~~aLVVasD~~~--y~~~~~--------~~t~GdGAvA~Ll~~~~~~~~~--~~~~g~~~----  186 (446)
                      ||.+|..+|++|..  ++||||++|.++  +.++.+        ..+|||||+|+||++++.-...  ..+.+..+    
T Consensus       164 al~~A~~~i~sg~~--~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~~~~~~~~~p  241 (387)
T 3oit_A          164 ALRLAKDLAENSRG--ARVLVVAAELTLMYFTGPDEGCFRTLLVQGLFGDGAAAVIVGADADDVERPLFEIVSAAQTIIP  241 (387)
T ss_dssp             HHHHHHHHHHSSTT--CEEEEEEEECGGGTCCCCCSSSCHHHHHHHHBCCEEEEEEEESSCCSSCCCCEEEEEEEEEECT
T ss_pred             HHHHHHHHHhcCCC--CEEEEEEEeccchhccCccccchHhhhcccccccceEEEEEecCCCcccCCceEEEecccEEeC
Confidence            99999999999955  999999999984  333222        2469999999999987521000  01111111    


Q ss_pred             --cccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCCc--eeeccCcchHHHHHHHHHhh
Q 013297          187 --SHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNAD--YFVFHSPYNKLVQKSFARLL  262 (446)
Q Consensus       187 --~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~did--~~i~H~p~~~~~~~~~~~l~  262 (446)
                        .+.++......+.. ..++ +..+....+.+++++++++++..  .+.+++  |+|  +|++||+|.+|++.+.++| 
T Consensus       242 ~~~~~~~~~~~~~g~~-~~~~-~~v~~~~~~~~~~~~~~~L~~~~--~~~gl~--d~d~~~~v~Hq~n~~il~~v~~~L-  314 (387)
T 3oit_A          242 ESDHALNMRFTERRLD-GVLG-RQVPGLIGDNVERCLLDMFGPLL--GGDGGG--GWNDLFWAVHPGSSTIMDQVDAAL-  314 (387)
T ss_dssp             TCTTSEEEEECSSSEE-EEEC-TTHHHHHHHHHHHHHHHHTGGGC--C--------GGGSEEEECCCCHHHHHHHHHHH-
T ss_pred             CChhhccceeecCCeE-EEEC-cHHHHHHHHHHHHHHHHHHHhhc--ccCCCC--cccccEEEECCCCHHHHHHHHHHc-
Confidence              01111100000111 1122 44444445666666666655430  000454  566  9999999999999999998 


Q ss_pred             hhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHh
Q 013297          263 FNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHN  342 (446)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~  342 (446)
                                             |++.+++..++      .++                +++|||++||+|++|..+++.
T Consensus       315 -----------------------gl~~ek~~~s~------~~l----------------~~~GNtssAsip~~L~~~~~~  349 (387)
T 3oit_A          315 -----------------------GLEPGKLAASR------RVL----------------SDYGNMSGATVIFALDELRRQ  349 (387)
T ss_dssp             -----------------------TCCTTTTHHHH------HHH----------------HHHCBCGGGHHHHHHHHHHHC
T ss_pred             -----------------------CCCHHHHHHHH------HHH----------------HHhCchHHhHHHHHHHHHHHh
Confidence                                   89988754210      124                899999999999999998765


Q ss_pred             cCCCCCC------CEEEEEEeccccceeeEEEEEeC
Q 013297          343 KHSELDG------KRVVLFSYGSGLTATMFSLKLSE  372 (446)
Q Consensus       343 ~~~~~~G------~~vll~syGsG~~~~~~~l~~~~  372 (446)
                        ++++|      |+|+|++||+|++|+++++++.+
T Consensus       350 --~~~~G~~g~~~d~vll~~fG~G~t~~~~ll~~~~  383 (387)
T 3oit_A          350 --RKEAAAAGEWPELGVMMAFGPGMTVDAMLLHATS  383 (387)
T ss_dssp             ------------CCEEEEEEEETTTEEEEEEEEECC
T ss_pred             --hhccCCCCCCCCEEEEEEecccceeeeeeeEecc
Confidence              45667      89999999999999999999875

>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A

Probab=100.00  E-value=7.2e-41  Score=341.50  Aligned_cols=304  Identities=18%  Similarity=0.254  Sum_probs=234.3

Q ss_pred             CCceeEEeEEEEecCCccccHHHHHHhc-C-C-C---------ccee--EEeecceEEecCCCC----------------
Q 013297            1 MAKNVGILAMDIYFPPTCVQQEALEAHD-G-A-S---------KGKY--TIGLGQECMAFCSEV----------------   50 (446)
Q Consensus         1 ~~~~vgI~~i~~y~P~~~v~~~~l~~~~-g-~-~---------~~k~--~~Glg~r~~av~~~~----------------   50 (446)
                      |.++++|.+++.|+|+++++|+++++.. + . +         .+|+  ++||.+|+++  .++                
T Consensus         9 m~~~~~I~gig~~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~--~~~~~~~~~p~~~~~~~~~   86 (387)
T 3a5r_A            9 MKKLATVMAIGTANPPNCYYQADFPDFYFRVTNSDHLINLKQKFKRLCENSRIEKRYLH--VTEEILKENPNIAAYEATS   86 (387)
T ss_dssp             --CCEEEEEEEEECCSCEEETTTHHHHHHHHTTCTTCHHHHHHHHHHHHTTTCCEEECS--CCHHHHHHCHHHHSSSSSC
T ss_pred             cCCCcEEEEeeecCCCcccCHHHHHHHHHHhcccccchhhHHHHHHHHHhCCCCceEEe--cChhhhccCcccccccCCC
Confidence            3456999999999999999999999875 2 2 1         1344  4799998865  333                


Q ss_pred             ---------CCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCce-eeeeCCcChhH
Q 013297           51 ---------EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIE-GVDSTNACYGG  120 (446)
Q Consensus        51 ---------Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~-~~di~~aC~gg  120 (446)
                               ++..+|+++|++++|+++|+++++||.||++|+++ +..|+++.+|+++||+  ...+. +++++++|+|+
T Consensus        87 ~~~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~-~~~p~~a~~v~~~lGl--~~~~~~~~~v~~aC~s~  163 (387)
T 3a5r_A           87 LNVRHKMQVKGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAG-VDMPGADYQLTKLLDL--DPSVKRFMFYHLGCYAG  163 (387)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CEESCHHHHHHHHTTC--CTTCEEEEEESCCTTHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCC-CCCCcHHHHHHHHcCc--CCCcceeeeEccccHHH
Confidence                     68899999999999999999999999999999997 5689999999999998  44564 99999999999


Q ss_pred             HHHHHHHHHHHHcCCCCCCEEEEEEeecCc--cCCCC-----C---CccccccceeeeeccCCCcccc---ccccccccc
Q 013297          121 TAALFNCVNWVESSSWDGRYGLVVCTDSAV--YAEGP-----A---RPTGGAAAVVMLVGPDAPVAFE---SKLRGSHMS  187 (446)
Q Consensus       121 ~~AL~~A~~~l~sg~~~~~~aLVVasD~~~--y~~~~-----~---~~t~GdGAvA~Ll~~~~~~~~~---~~~~g~~~~  187 (446)
                      +.||.+|..+|++|..  ++||||++|..+  +.++.     .   ..+|||||+|+||++++...+.   ..+.+..  
T Consensus       164 ~~al~~A~~~i~~g~~--~~vLvvg~e~~s~~~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~~~~~~~~~l~~~~--  239 (387)
T 3a5r_A          164 GTVLRLAKDIAENNKG--ARVLIVCSEMTTTCFRGPSETHLDSMIGQAILGDGAAAVIVGADPDLTVERPIFELVSTA--  239 (387)
T ss_dssp             HHHHHHHHHHHHHSTT--CEEEEEEEECCTTTCCCCCSSCCSSTTHHHHBCCEEEEEEEESSCCTTTCCCCEEEEEEE--
T ss_pred             HHHHHHHHHHHHhCCC--CEEEEEEEeccchhhcCCCccchhhccccceeccceeEEEEecCCCccccCCceEEEeee--
Confidence            9999999999999966  999999999874  22211     1   2479999999999987531110   0011110  


Q ss_pred             ccccccccCCCCC----------CcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCC-cCCCceeeccCcchHHHHH
Q 013297          188 HAYDFYKPNLASE----------YPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFS-LSNADYFVFHSPYNKLVQK  256 (446)
Q Consensus       188 ~~~df~~p~~~~~----------~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~-~~did~~i~H~p~~~~~~~  256 (446)
                         ....|.....          +..+ ++..+....+.+++++++++++.      +++ .+|| +|++||++.++++.
T Consensus       240 ---~~~~p~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~------gl~d~~di-~~v~Hq~~~~i~~~  308 (387)
T 3a5r_A          240 ---QTIVPESHGAIEGHLLESGLSFHL-YKTVPTLISNNIKTCLSDAFTPL------NISDWNSL-FWIAHPGGPAILDQ  308 (387)
T ss_dssp             ---EEECTTCTTSEEEEEETTEEEEEE-CTTHHHHHHHHHHHHHHHHHGGG------TCCCGGGS-EEEECCSCHHHHHH
T ss_pred             ---EEEeCCChHhcCceEcCCCeEEEe-cchHHHHHHHHHHHHHHHHHHhc------CCCChhhe-eEEECCCCHHHHHH
Confidence               0112221100          0112 55566667778888888888775      676 7888 89999999999999


Q ss_pred             HHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHH
Q 013297          257 SFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAAL  336 (446)
Q Consensus       257 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L  336 (446)
                      +.++|                        |++.++.+..+      .++                +++|||++||+|++|
T Consensus       309 ~~~~l------------------------gl~~ek~~~s~------~~l----------------~~~GNtssAsi~~~L  342 (387)
T 3a5r_A          309 VTAKV------------------------GLEKEKLKVTR------QVL----------------KDYGNMSSATVFFIM  342 (387)
T ss_dssp             HHHHH------------------------TCCGGGGHHHH------HHH----------------HHHCBCGGGHHHHHH
T ss_pred             HHHHc------------------------CCChHHhHHHH------HHH----------------HhcCCcchhHHHHHH
Confidence            99888                        88877654210      123                799999999999999


Q ss_pred             HHHHHhcCCCCCC--------CEEEEEEeccccceeeEEEEEeC
Q 013297          337 ASLIHNKHSELDG--------KRVVLFSYGSGLTATMFSLKLSE  372 (446)
Q Consensus       337 ~~~l~~~~~~~~G--------~~vll~syGsG~~~~~~~l~~~~  372 (446)
                      ++++++ ++ ++|        ++|+|++||+|++|++++++|.+
T Consensus       343 ~~~~~~-g~-~~G~~~~G~~~d~vll~~fG~G~t~~~~ll~~~~  384 (387)
T 3a5r_A          343 DEMRKK-SL-ENGQATTGEGLEWGVLFGFGPGITVETVVLRSVP  384 (387)
T ss_dssp             HHHHHH-HH-HTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECB
T ss_pred             HHHHHh-cc-ccCCCCCCCCcceEEEEEecCcceeeehhheecc
Confidence            999987 44 556        99999999999999999999986

>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2

Probab=100.00  E-value=5e-41  Score=342.12  Aligned_cols=306  Identities=14%  Similarity=0.132  Sum_probs=237.3

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhcCCC------c---cee--EEeecceEEecCCC-----------------CCCHH
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHDGAS------K---GKY--TIGLGQECMAFCSE-----------------VEDVI   54 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~------~---~k~--~~Glg~r~~av~~~-----------------~Ed~~   54 (446)
                      |+++|.+++.|+|+++++++++++..+..      .   +|+  ++||.+|+++  .+                 +++..
T Consensus         8 ~m~~I~gig~~~P~~~v~~~~l~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~--~~~~~~~~~~~~~~r~~~~~~~~~   85 (382)
T 1u0m_A            8 FMATLCRPSVSVPEHVITMEETLELARRRHTDHPQLPLALRLIENTGVRTRHIV--QPIEDTLEHPGFEDRNKVYEREAK   85 (382)
T ss_dssp             --CEECCCEEECCSEEEEHHHHHHHHHHHHTTCTTHHHHHHHHHHTCCCEEEES--SCHHHHTSCCCHHHHHHHHHHHHH
T ss_pred             cceEEEEEEEeCCCcccCHHHHHHHHHHhccChhhHHHHHHHHHhcCCCcceee--cChhhhccCCChhHHHHHHHHHHH
Confidence            34899999999999999999998876543      1   234  4799998865  44                 67889


Q ss_pred             HHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeee-CCcChhHHHHHHHHHHHHHc
Q 013297           55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDS-TNACYGGTAALFNCVNWVES  133 (446)
Q Consensus        55 ~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di-~~aC~gg~~AL~~A~~~l~s  133 (446)
                      +|+++|++++|+++|+++++||.||++|+++ +..|+++.+|+.+||+  ..+++++++ +++|+|++.||..|..+|++
T Consensus        86 ~la~~Aa~~aL~~agl~~~~id~vi~~t~~~-~~~p~~a~~v~~~lGl--~~~~~~~~v~~~aCss~~~Al~~A~~~i~~  162 (382)
T 1u0m_A           86 SRVPAVIQRALDDAELLATDIDVIIYVSCTG-FMMPSLTAWLINEMGF--DSTTRQIPIAQLGCAAGGAAINRAHDFCTA  162 (382)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCSEEEEECSSS-CCSSCHHHHHHHHTTC--CTTCEEEEECSCGGGHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCHHHCCEEEEEecCC-CCCCcHHHHHHHHhCC--CCCcceEEccCCcCHHHHHHHHHHHHHHHc
Confidence            9999999999999999999999999999998 6789999999999998  456899999 89999999999999999999


Q ss_pred             CCCCCCEEEEEEeecCcc-CCCC--C------CccccccceeeeeccCCCcccccccccccc---cccc--cccccCCCC
Q 013297          134 SSWDGRYGLVVCTDSAVY-AEGP--A------RPTGGAAAVVMLVGPDAPVAFESKLRGSHM---SHAY--DFYKPNLAS  199 (446)
Q Consensus       134 g~~~~~~aLVVasD~~~y-~~~~--~------~~t~GdGAvA~Ll~~~~~~~~~~~~~g~~~---~~~~--df~~p~~~~  199 (446)
                      |..  ++|||+++|..+. .+..  .      ..+|||||+|+||++.+.-.  ..+.+..+   .+..  ..|.... .
T Consensus       163 g~~--~~vLv~g~e~~s~~~~~~d~~~~~~~~~~lfGDGA~A~vL~~~~~~g--~~i~~~~~~~~~~~~~~~~~~~~~-~  237 (382)
T 1u0m_A          163 YPE--ANALIVACEFCSLCYQPTDLGVGSLLCNGLFGDGIAAAVVRGRGGTG--VRLERNGSYLIPKTEDWIMYDVKA-T  237 (382)
T ss_dssp             STT--CEEEEEEEEEGGGGCCTTCCSHHHHHHHHHBCEEEEEEEEETTTCSE--EEEEEEEEEECSSCTTTEEEEEET-T
T ss_pred             CCC--CEEEEEEEeccchhcCcccCCHHHhhccchhcCCcEEEEEeccCCCC--cEEEEeeeEecCChHHhcCceecC-C
Confidence            966  9999999998742 2221  1      35799999999999765311  11222111   1111  1222110 0


Q ss_pred             CCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhh
Q 013297          200 EYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKE  279 (446)
Q Consensus       200 ~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  279 (446)
                      .+....++..+..+.+.+. +++.++++.      +++++|||+|++|+++.++++.+.++|                  
T Consensus       238 g~~~~~~~~v~~~~~~~~~-~i~~aL~~a------gl~~~dId~v~~H~~~~~i~d~~~~~l------------------  292 (382)
T 1u0m_A          238 GFHFLLDKRVPATMEPLAP-ALKELAGEH------GWDASDLDFYIVHAGGPRILDDLSTFL------------------  292 (382)
T ss_dssp             EEEEEECTTTGGGHHHHHH-HHHHHHHTT------SCCSSCCSCCEEECSHHHHHHHHHHHS------------------
T ss_pred             ceEEEeCcHHHHHHHHHHH-HHHHHHHHc------CCCHHHCCEEEECCCCHHHHHHHHHHc------------------
Confidence            1111223333444556677 777777765      899999999999999999999988877                  


Q ss_pred             hcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEecc
Q 013297          280 KLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGS  359 (446)
Q Consensus       280 ~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGs  359 (446)
                            |++.+++..      ...++                +++||+++||++++|.+++++ +++++|++|++++||+
T Consensus       293 ------gl~~~k~~~------s~~~~----------------~~~Gnt~sAsi~~~L~~~~~~-g~~~~Gd~vll~~~G~  343 (382)
T 1u0m_A          293 ------EVDPHAFRF------SRATL----------------TEYGNIASAVVLDALRRLFDE-GGVEEGARGLLAGFGP  343 (382)
T ss_dssp             ------CSCGGGGHH------HHHHH----------------HHTCBCTTHHHHHHHHHHHHS-CCCCSSCCCEEEEEET
T ss_pred             ------CCCHHHHHH------HHHHH----------------HHhCCchhhHHHHHHHHHHHh-cCCCCCCEEEEEEEcc
Confidence                  787765421      01233                799999999999999999998 7888999999999999


Q ss_pred             ccceeeEEEEEeC
Q 013297          360 GLTATMFSLKLSE  372 (446)
Q Consensus       360 G~~~~~~~l~~~~  372 (446)
                      |+++++++++|..
T Consensus       344 G~t~~~~vl~~~~  356 (382)
T 1u0m_A          344 GITAEMSLGCWQT  356 (382)
T ss_dssp             TTEEEEEEEEEEC
T ss_pred             cceeEEEEEEEee
Confidence            9999999999986

>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}

Probab=100.00  E-value=9.9e-40  Score=331.46  Aligned_cols=305  Identities=14%  Similarity=0.170  Sum_probs=234.6

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhcC--C-C-------ccee--EEeecceEEecCCCC--------------------
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHDG--A-S-------KGKY--TIGLGQECMAFCSEV--------------------   50 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g--~-~-------~~k~--~~Glg~r~~av~~~~--------------------   50 (446)
                      ++++|.+++.|+|+.+++++++++..+  . +       .+|+  ++||++|+++  .++                    
T Consensus        12 ~~v~I~g~g~~~P~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~--~~~~~~~~~~~~~~~~~~~~~~~   89 (374)
T 2h84_A           12 NNSFVLGIGISVPGEPISQQSLKDSISNDFSDKAETNEKVKRIFEQSQIKTRHLV--RDYTKPENSIKFRHLETITDVNN   89 (374)
T ss_dssp             CCCEEEEEEEECSSSCEEHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCCCEECCS--SCTTSGGGCGGGGGGCCHHHHHH
T ss_pred             CCeEEEEEEEeCCCcccCHHHHHHHHHHhhccChHHHHHHHHHHHhCCcCcceee--cCccccccccccCChHHHHHHHH
Confidence            469999999999999999999998753  2 1       1233  4789888865  344                    


Q ss_pred             ---CCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeC-CcChhHHHHHHH
Q 013297           51 ---EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST-NACYGGTAALFN  126 (446)
Q Consensus        51 ---Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~-~aC~gg~~AL~~  126 (446)
                         ++..+|+++|++++|+++|+++++||.||++|+++ +..|+++.+|+..||+  ..+++++++. +||+|++.||.+
T Consensus        90 ~~~~~~~~la~~Aa~~al~~ag~~~~~id~vi~~t~~~-~~~p~~a~~v~~~lGl--~~~~~~~~v~~~aCss~~~al~~  166 (374)
T 2h84_A           90 QFKKVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTG-IIIPDVNFKLIDLLGL--NKDVERVSLNLMGCLAGLSSLRT  166 (374)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CCSSCHHHHHHHHHTC--CTTCEEEEEESCGGGHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCC-CCCCcHHHHHHHHcCc--CCCCceEEecCCcCHHHHHHHHH
Confidence               77899999999999999999999999999999987 5689999999999998  4568999997 899999999999


Q ss_pred             HHHHHHcCCCCCCEEEEEEeecCcc-C-CCCCC------ccccccceeeeeccCCCc---c-cccccccccc-cccccc-
Q 013297          127 CVNWVESSSWDGRYGLVVCTDSAVY-A-EGPAR------PTGGAAAVVMLVGPDAPV---A-FESKLRGSHM-SHAYDF-  192 (446)
Q Consensus       127 A~~~l~sg~~~~~~aLVVasD~~~y-~-~~~~~------~t~GdGAvA~Ll~~~~~~---~-~~~~~~g~~~-~~~~df-  192 (446)
                      |..+|++|..  ++||||++|..+. . ++.++      .+|||||+|+||++.+..   . +.....++.. .+..+. 
T Consensus       167 A~~~i~~g~~--~~vLv~g~e~~s~~~~~~~dr~~~~~~~lfGDGA~A~vL~~~~~~~~~~~~~l~~~g~~~~~~~~~~~  244 (374)
T 2h84_A          167 AASLAKASPR--NRILVVCTEVCSLHFSNTDGGDQMVASSIFADGSAAYIIGCNPRIEETPLYEVMCSINRSFPNTENAM  244 (374)
T ss_dssp             HHHHHTTCTT--CEEEEEEEECCGGGCCCSSSHHHHHHHHHBCCEEEEEEEESSCCTTCCCCEEEEEEEEEECSSCTTSE
T ss_pred             HHHHHHcCCC--CEEEEEEEEecchhhcCCCCHHHHhhhhhhccCcEEEEEecCCCcccCCceeEEeeeeEEeCCCcccc
Confidence            9999999966  9999999998742 2 23332      579999999999987531   0 1100011110 000010 


Q ss_pred             -cccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCC------CCcCCCceeeccCcchHHHHHHHHHhhhhh
Q 013297          193 -YKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQ------FSLSNADYFVFHSPYNKLVQKSFARLLFND  265 (446)
Q Consensus       193 -~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~------~~~~did~~i~H~p~~~~~~~~~~~l~~~~  265 (446)
                       |.+. ...+....|+..+....+.+.+++++++++.      +      ++++|||+| +|+++.++++.+.++|    
T Consensus       245 ~~~~~-~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~a------g~~~~~~l~~~did~~-~H~~~~~i~d~~~~~l----  312 (374)
T 2h84_A          245 VWDLE-KEGWNLGLDASIPIVIGSGIEAFVDTLLDKA------KLQTSTAISAKDCEFL-IHTGGKSILMNIENSL----  312 (374)
T ss_dssp             EEEEE-TTEEEEEECTTHHHHHHHHHHHHHHHHHHHH------TTTSCSCCCSSSSEEE-ECCCCHHHHHHHHHHT----
T ss_pred             eeEEe-cCcEEEEeCchHHHHHHHHHHHHHHHHHHhc------CCccccCCChhhcCEe-ECCCCHHHHHHHHHHc----
Confidence             1111 0001111344455555677888888888876      7      899999999 9999999999988887    


Q ss_pred             ccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCC
Q 013297          266 FMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHS  345 (446)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~  345 (446)
                                          |++.+++..+      ..++                +++||+++||+|++|.+++++ ++
T Consensus       313 --------------------gl~~~k~~~s------~~~~----------------~~~Gnt~sasi~~~L~~~~~~-~~  349 (374)
T 2h84_A          313 --------------------GIDPKQTKNT------WDVY----------------HAYGNMSSASVIFVMDHARKS-KS  349 (374)
T ss_dssp             --------------------TCCGGGGHHH------HHHH----------------HHHCBCTTHHHHHHHHHHHTC-SC
T ss_pred             --------------------CCCHHHHHHH------HHHH----------------HHhCCchhhHHHHHHHHHHhh-cC
Confidence                                8887654310      0123                799999999999999999988 54


Q ss_pred             CCCCCEEEEEEeccccceeeEEEEEe
Q 013297          346 ELDGKRVVLFSYGSGLTATMFSLKLS  371 (446)
Q Consensus       346 ~~~G~~vll~syGsG~~~~~~~l~~~  371 (446)
                        +|++|++++||+|++|++++++|.
T Consensus       350 --~Gd~vll~~~G~G~t~~~~ll~~~  373 (374)
T 2h84_A          350 --LPTYSISLAFGPGLAFEGCFLKNV  373 (374)
T ss_dssp             --CCSEEEEEEEETTTEEEEEEEEEC
T ss_pred             --CCCeEEEEEeccchhhhhhhheec
Confidence              899999999999999999999985

>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}

Probab=100.00  E-value=1.6e-39  Score=332.79  Aligned_cols=308  Identities=15%  Similarity=0.096  Sum_probs=231.9

Q ss_pred             CceeEEeEEEEecCCccccHHHHHHhcC----CCc--cee-----EEeecceEEecCCC---------------------
Q 013297            2 AKNVGILAMDIYFPPTCVQQEALEAHDG----ASK--GKY-----TIGLGQECMAFCSE---------------------   49 (446)
Q Consensus         2 ~~~vgI~~i~~y~P~~~v~~~~l~~~~g----~~~--~k~-----~~Glg~r~~av~~~---------------------   49 (446)
                      +|.+.|.+|++.+|++.++|+++.++.+    .++  .++     ++||.+|++.++.+                     
T Consensus        24 ~m~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~l~~~~~~~~~~~~~~~~~~~~~~~~  103 (413)
T 3v7i_A           24 AMAAYLCAPAVIHGEHSVETREIVEEVRGRHPHAPWAPRIDGIAASTGIESRGWMLPLEAAVAPGGGGDLGAAREALVRD  103 (413)
T ss_dssp             CCCEEEECCEEEECSEEEEHHHHHHHHHHHCSSCSSGGGHHHHHHHHTCSEEEESSCHHHHHSCCCCCCCHHHHHHC---
T ss_pred             CCCeEEEeeEeeCCCcccCHHHHHHHHHHhcccchhHHHHHHHHHhCCcCeeeeecCHHHhccccccccccccccccccc
Confidence            3579999999999999999999887653    122  112     47999999876411                     


Q ss_pred             ------------------------------CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHH
Q 013297           50 ------------------------------VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQI   99 (446)
Q Consensus        50 ------------------------------~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~   99 (446)
                                                    .+++.+|+++|++++|+++|+++++||.||++|+++ +..|+++.+|+++
T Consensus       104 ~~~n~~l~~~~~~~e~i~~rtgi~~R~~~~~~~~~~La~~Aa~~AL~~agi~~~dId~li~~t~t~-~~~P~~a~~v~~~  182 (413)
T 3v7i_A          104 GFTEQDANRAIAALKAVPASQTVQERTAPAWEAVQAYGERAARGALQIAGLDVADVDCLITSNSTT-PALPGLDVALANR  182 (413)
T ss_dssp             ---CHHHHHHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECCSS-CCSSCHHHHHHHH
T ss_pred             ccchhhhhhhcCcccceecCCCHHHhCcccccCHHHHHHHHHHHHHHHhCcCHHHCCEEEEEccCC-CCcCHHHHHHHHH
Confidence                                          135778999999999999999999999999999998 5689999999999


Q ss_pred             hcccCCCCceeeee-CCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCcc-CCCCC--------Cccccccceeeee
Q 013297          100 FEKFGNTDIEGVDS-TNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AEGPA--------RPTGGAAAVVMLV  169 (446)
Q Consensus       100 LGl~g~~~~~~~di-~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~~~~--------~~t~GdGAvA~Ll  169 (446)
                      ||+  .+++.++++ +++|+||++||.+|..+|++|..  ++||||++|.++. .++.+        ..+|||||+|+||
T Consensus       183 LGl--~~~~~~~~v~~~~Cagg~~AL~~A~~~i~ag~~--~~vLvvg~E~~S~~~~~~d~~~~~lv~~~LFGDGAaAvvl  258 (413)
T 3v7i_A          183 LPL--RGDTMLLPATQWACVAGTRSLALAADLVAADPD--RVVLVVISEALSTTYQPADDTLESLIVRLLFADTAVAAVV  258 (413)
T ss_dssp             TTC--CTTCEEEEESSCGGGHHHHHHHHHHHHHHHCTT--CEEEEEEEECGGGGCCSSCCSTTHHHHHHHBCCEEEEEEE
T ss_pred             hCC--CCCceEEEeeCCccHHHHHHHHHHHHHHhcCCC--CEEEEEEEeccccccCccccchhhhhcceeeccccEEEEE
Confidence            998  567899999 89999999999999999999954  9999999999842 22222        3569999999999


Q ss_pred             ccCCC--ccccccccccccccccc-----ccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCCc
Q 013297          170 GPDAP--VAFESKLRGSHMSHAYD-----FYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNAD  242 (446)
Q Consensus       170 ~~~~~--~~~~~~~~g~~~~~~~d-----f~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~did  242 (446)
                      ++++.  ..+.  +.++......+     .|.......+..++|+. . .+++.+.+++++++++.....+++++   ||
T Consensus       259 ~~~~~~~~~~~--l~~~~~~~~p~~~~~~~~~~~~~g~~~~m~~~v-~-~~v~~~~~~i~~~L~~~~~~~~~gl~---id  331 (413)
T 3v7i_A          259 TGRPRPESVLR--LDAAWHHTLPGTRDLHRLETRADGTHFVMDRRG-P-RAVQETVTAMWEWLRVRYEDDPSSWH---PD  331 (413)
T ss_dssp             ESSCCTTEEEE--EEEEEEEECTTCTTSEEEEEETTEEEEEECTTH-H-HHHHHHHHHHHHHHHHHTSSSCTTCC---CC
T ss_pred             EecCCCCCCEE--EEccccEEeCCCccccCccccCCceEEEECcHH-H-HHHHHHHHHHHHHHhhccccccCCCc---ee
Confidence            98763  1111  12221110010     01100000012356662 2 35566777787777721100023564   99


Q ss_pred             eeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCC--CCCCccccchhHHHHHHhhhhhhhhhccCCCccc
Q 013297          243 YFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFST--LSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLI  320 (446)
Q Consensus       243 ~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g--~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~  320 (446)
                      +|++||++.++++.+.++|                        |  ++.++..      ....++               
T Consensus       332 ~~v~Hq~~~~il~~v~~~L------------------------g~~l~~ek~~------~s~~~l---------------  366 (413)
T 3v7i_A          332 VLLAHPGGTRVLEYMEQTM------------------------PDEWPSGLLS------YSRDSY---------------  366 (413)
T ss_dssp             EEEEECSSHHHHHHHHHHS------------------------CSSCCSCSTH------HHHHHH---------------
T ss_pred             EEEECCCChHHHHHHHHHh------------------------CCCCCHHHhh------ccceEe---------------
Confidence            9999999999999999988                        8  8887641      112344               


Q ss_pred             cccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEE
Q 013297          321 PKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKL  370 (446)
Q Consensus       321 ~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~  370 (446)
                       + +|||++||+++.|..++ + +++++||+++|++||+|+++++++++|
T Consensus       367 -~-~GNtssAsi~~~L~~~~-~-~~~~~Gd~vll~~fG~Glt~~~~ll~w  412 (413)
T 3v7i_A          367 -T-SGNRGGAAVFDILRRAH-D-AGQKTGSRAVLYAAAPGLTATALEGEW  412 (413)
T ss_dssp             -T-TCBCGGGHHHHHHHHHH-H-HCCCTTCEEEEEEEETTTEEEEEEEEE
T ss_pred             -c-eeChHHHHHHHHHHHHH-h-CCCCCCCEEEEEEECHHHhHhhhheEe
Confidence             8 99999999999999999 4 568899999999999999999999998

>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A

Probab=100.00  E-value=1.7e-39  Score=333.87  Aligned_cols=305  Identities=17%  Similarity=0.218  Sum_probs=234.3

Q ss_pred             CceeEEeEEEEecCCccccHHHHHHhcCC---C---------ccee--EEeecceEEecCC---------------CC--
Q 013297            2 AKNVGILAMDIYFPPTCVQQEALEAHDGA---S---------KGKY--TIGLGQECMAFCS---------------EV--   50 (446)
Q Consensus         2 ~~~vgI~~i~~y~P~~~v~~~~l~~~~g~---~---------~~k~--~~Glg~r~~av~~---------------~~--   50 (446)
                      +++++|.+++.|+|+++++|+++++..+.   +         .+|+  ++||.+|+++.++               +.  
T Consensus        36 ~~~~~I~gig~~lP~~~v~n~el~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~a~~~~~~~~~p~~~~~~~~~~~~  115 (413)
T 1xes_A           36 DGFASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYLTEEILKKNPDVCAFVEVPSLD  115 (413)
T ss_dssp             CSCEEEEEEEEECCSCEEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHHTSCCCEEECSCCHHHHHTCHHHHSSSSSCCHH
T ss_pred             CCCeEEEEEeecCCCCccCHHHHHHHHHHhccccchhhhHHHHHHHHhhcCcCceEEeeChhhhccCccccccccCCCHH
Confidence            35789999999999999999999987521   1         1344  4799999865322               00  


Q ss_pred             -------CCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCc-eeeeeCCcChhHHH
Q 013297           51 -------EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDI-EGVDSTNACYGGTA  122 (446)
Q Consensus        51 -------Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~-~~~di~~aC~gg~~  122 (446)
                             ++..+|+++|++++|+++|+++++||.||++|+++ +..|+++.+|+++||+  ...+ ++++++++|+|++.
T Consensus       116 ~r~~~~~~~~~~La~~Aa~~AL~~agl~~~~Id~li~~t~~~-~~~p~~a~~v~~~lGl--~~~~~~~~~v~~aCas~~~  192 (413)
T 1xes_A          116 ARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTT-PDLPGADFEVAKLLGL--HPSVKRVGVFQHGCFAGGT  192 (413)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESCC-CEESCHHHHHHHHHTC--CTTCEEEEEESCCTTHHHH
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CccchHHHHHHHHcCc--CCccchhceecCccHHHHH
Confidence                   47899999999999999999999999999999998 5689999999999998  4456 49999999999999


Q ss_pred             HHHHHHHHHHcCCCCCCEEEEEEeecCc--cCCCC--------CCccccccceeeeeccCCCcccc---ccccccccccc
Q 013297          123 ALFNCVNWVESSSWDGRYGLVVCTDSAV--YAEGP--------ARPTGGAAAVVMLVGPDAPVAFE---SKLRGSHMSHA  189 (446)
Q Consensus       123 AL~~A~~~l~sg~~~~~~aLVVasD~~~--y~~~~--------~~~t~GdGAvA~Ll~~~~~~~~~---~~~~g~~~~~~  189 (446)
                      ||.+|..+|++|..  ++||||++|..+  +.++.        ...+|||||+|+||++.+...+.   ..+.+...   
T Consensus       193 AL~~A~~~i~~G~~--~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~~~~~~~~~l~~~~~---  267 (413)
T 1xes_A          193 VLRMAKDLAENNRG--ARVLVICSETTAVTFRGPSETHLDSLVGQALFGDGASALIVGADPIPQVEKACFEIVWTAQ---  267 (413)
T ss_dssp             HHHHHHHHHHTSTT--CCEEEEEEECTTTTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCCTTTSCCSEEEEEEEE---
T ss_pred             HHHHHHHHHHcCCC--CEEEEEEehhhhhhhcCCCccchhhcccceeEecccEEEEEecCCCccccCCceEEEeeee---
Confidence            99999999999965  999999999874  32221        12479999999999987531110   00111100   


Q ss_pred             ccccccCCCC---------C-CcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCC-cCCCceeeccCcchHHHHHHH
Q 013297          190 YDFYKPNLAS---------E-YPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFS-LSNADYFVFHSPYNKLVQKSF  258 (446)
Q Consensus       190 ~df~~p~~~~---------~-~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~-~~did~~i~H~p~~~~~~~~~  258 (446)
                        ...|....         . +..+ ++..+..+.+.+.+++++++++.      +++ .+|+ +|++||++.++++.+.
T Consensus       268 --~~~p~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~------gl~d~~di-~~v~Hq~~~~i~~~~~  337 (413)
T 1xes_A          268 --TVVPNSEGAIGGKVREVGLTFQL-KGAVPDLISANIENCMVEAFSQF------KISDWNKL-FWVVHPGGRAILDRVE  337 (413)
T ss_dssp             --EECTTCTTTEEEEEETTEEEEEE-CTTHHHHHHHHHHHHHHHHHGGG------TCCCGGGS-EEEECCSCHHHHHHHH
T ss_pred             --EEcCCChhhcCcEEecCceEEEe-cccHHHHHHHHHHHHHHHHHHhc------CCCCccce-eEEECCCCHHHHHHHH
Confidence              11122110         0 0112 45556666778888888887765      676 7788 7999999999999999


Q ss_pred             HHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHH
Q 013297          259 ARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALAS  338 (446)
Q Consensus       259 ~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~  338 (446)
                      ++|                        |++.++++.+      ..++                +++|||++||+|++|+.
T Consensus       338 ~~L------------------------gl~~ek~~~s------~~~l----------------~~~GNtssAsi~~~L~~  371 (413)
T 1xes_A          338 AKL------------------------NLDPTKLIPT------RHVM----------------SEYGNMSSACVHFILDQ  371 (413)
T ss_dssp             HHT------------------------TCCTTTTHHH------HHHH----------------HHHCBCGGGHHHHHHHH
T ss_pred             HHc------------------------CCChHHhHHH------HHHH----------------HhcCcCchhhHHHHHHH
Confidence            888                        8888775421      0123                79999999999999999


Q ss_pred             HHHhcCCCCCC--------CEEEEEEeccccceeeEEEEEeC
Q 013297          339 LIHNKHSELDG--------KRVVLFSYGSGLTATMFSLKLSE  372 (446)
Q Consensus       339 ~l~~~~~~~~G--------~~vll~syGsG~~~~~~~l~~~~  372 (446)
                      ++++ ++ ++|        ++|+|++||+|++|++++++|.+
T Consensus       372 ~~~~-g~-~~G~~~~G~~~d~vll~~fG~G~t~~~~ll~~~~  411 (413)
T 1xes_A          372 TRKA-SL-QNGCSTTGEGLEMGVLFGFGPGLTIETVVLKSVP  411 (413)
T ss_dssp             HHHH-HH-HTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECB
T ss_pred             HHHh-cc-ccCCCCCCCCcceEEEEEecCCcEEeEEEEEecc
Confidence            9987 44 555        99999999999999999999986

>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}

Probab=100.00  E-value=2.7e-38  Score=357.38  Aligned_cols=310  Identities=19%  Similarity=0.204  Sum_probs=235.5

Q ss_pred             CceeEEeEEEEecCCccccHHHHHHh---cCCCcce---------e--EEeecceEEecCCCCC----------------
Q 013297            2 AKNVGILAMDIYFPPTCVQQEALEAH---DGASKGK---------Y--TIGLGQECMAFCSEVE----------------   51 (446)
Q Consensus         2 ~~~vgI~~i~~y~P~~~v~~~~l~~~---~g~~~~k---------~--~~Glg~r~~av~~~~E----------------   51 (446)
                      .++++|.++|+|+|+.+++|+++++.   .+.++.|         +  ++|+.+|++.  .++|                
T Consensus       601 ~~~~~I~g~g~~~P~~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~sGI~~r~~~--~~~~~~~~~~~~~~~~~~~~  678 (979)
T 3tsy_A          601 KGPATILAIGTATPDHCVYQSDYADYYFKVTKSEHMTALKKKFNRICDKSMIKKRYIH--LTEEMLEEHPNIGAYMAPSL  678 (979)
T ss_dssp             CSCEEEEEEEEECCSCEEEHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTCCCEEECS--CCHHHHHHCHHHHSSSSCCH
T ss_pred             cCCceeecccCCCCCCccCHHHHHHHHHHhccccchHHHHHHHHHHHHhcCcceeeEe--cChhhhhcCcccccccCCCH
Confidence            45799999999999999999999998   6777765         4  4788888854  4444                


Q ss_pred             ---------CHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHH
Q 013297           52 ---------DVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTA  122 (446)
Q Consensus        52 ---------d~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~  122 (446)
                               +..+||++|+++||+++|+++++||.||++|++ ++..|+++.+|+++||+. ...+.++|+++||+|++.
T Consensus       679 ~~r~~~~~~~~~~la~~Aa~~AL~~agl~~~dId~ii~~t~~-~~~~p~~a~~v~~~lGl~-~~~~~~~~v~~aCsg~~~  756 (979)
T 3tsy_A          679 NIRQEIITAEVPKLGKEAALKALKEWGQPKSKITHLVFCTTS-GVEMPGADYKLANLLGLE-PSVRRVMLYHQGCYAGGT  756 (979)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESS-CCCSSCHHHHHHHHHTCC-TTCEEEEEESCCTTHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEEeeC-CCCCCcHHHHHHHHcCCC-cccEEEeeeccccHhHHH
Confidence                     478899999999999999999999999999955 466899999999999982 123579999999999999


Q ss_pred             HHHHHHHHHHcCCCCCCEEEEEEeecCccCC--CCC--------CccccccceeeeeccCCCccccc---cccccccccc
Q 013297          123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYAE--GPA--------RPTGGAAAVVMLVGPDAPVAFES---KLRGSHMSHA  189 (446)
Q Consensus       123 AL~~A~~~l~sg~~~~~~aLVVasD~~~y~~--~~~--------~~t~GdGAvA~Ll~~~~~~~~~~---~~~g~~~~~~  189 (446)
                      ||.+|..+|++|.+  ++||||++|......  ...        ..+|||||+|+||++.+...+..   ...+......
T Consensus       757 Al~~A~~~i~sG~~--~~vLvvg~e~~~~~~~~~~~~~~~~~~~~~lfGDGA~A~vL~~~~~~~~~~~~~~~~~~~~~~~  834 (979)
T 3tsy_A          757 VLRTAKDLAENNAG--ARVLVVCSEITVVTFRGPSEDALDSLVGQALFGDGSAAVIVGSDPDISIERPLFQLVSAAQTFI  834 (979)
T ss_dssp             HHHHHHHHHHTSTT--CEEEEEEEECTTTTCCCCCSSCHHHHHHHHHBCCEEEEEEEESSCCSSSCCCCEEEEEEEEEEC
T ss_pred             HHHHHHHHHHhCCC--CEEEEEEEEecchheeCCCccCHHHHhhhhhccCceEEEEEecCCCccccCcceEEEeeeeEEe
Confidence            99999999999966  999999999874322  111        14689999999999875421100   0111110000


Q ss_pred             ---ccccccCC-CCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhh
Q 013297          190 ---YDFYKPNL-ASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFND  265 (446)
Q Consensus       190 ---~df~~p~~-~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~  265 (446)
                         .....+.. ...+..+.++..+..+.+.+.++++..+++.      +++++|||+|++||+|.++++.+.++|    
T Consensus       835 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~al~~a------gl~~~did~~~~Hq~~~~i~~~~~~~l----  904 (979)
T 3tsy_A          835 PNSAGAIAGNLREVGLTFHLWPNVPTLISENVEKCLTQAFDPL------GISDWNSLFWIAHPGGPAILDAVEAKL----  904 (979)
T ss_dssp             TTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGG------TCCCGGGSEEEECCSCHHHHHHHHHHH----
T ss_pred             cCchhheEEEEecCceEEEEchHHHHHHHHHHHHHHHHHHhhc------CCCCcccceEEECCCChHHHHHHHHHc----
Confidence               00010000 0111123345555666677777777777665      899999999999999999999999998    


Q ss_pred             ccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCC
Q 013297          266 FMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHS  345 (446)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~  345 (446)
                                          |++.++.+.+      ..++                +++|||++||+|++|+++++.   
T Consensus       905 --------------------gl~~~k~~~~------~~~l----------------~~~GNtssasi~~~L~~~~~~---  939 (979)
T 3tsy_A          905 --------------------NLDKKKLEAT------RHVL----------------SEYGNMSSACVLFILDEMRKK---  939 (979)
T ss_dssp             --------------------TCCTTTTHHH------HHHH----------------HHHCBCTTHHHHHHHHHHHHH---
T ss_pred             --------------------CCChHHHHHH------HHHH----------------HHcCCcchhhHHHHHHHHHhh---
Confidence                                8888775421      1124                899999999999999998774   


Q ss_pred             CCCCCEE---------EEEEeccccceeeEEEEEeC
Q 013297          346 ELDGKRV---------VLFSYGSGLTATMFSLKLSE  372 (446)
Q Consensus       346 ~~~G~~v---------ll~syGsG~~~~~~~l~~~~  372 (446)
                      +++|++|         +|++||+|++|++++++|.+
T Consensus       940 ~~~G~~v~~g~~~~~~ll~~~G~G~t~~~~~l~~~~  975 (979)
T 3tsy_A          940 SLKGERATTGEGLDWGVLFGFGPGLTIETVVLHSIP  975 (979)
T ss_dssp             HHHTTCSBTTTTCSEEEEEEECGGGEEEEEEEECCB
T ss_pred             hcccccccCCCCcceeEEEEeCCchHHHHHHHHhcc
Confidence            2345554         99999999999999999976

>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A

Probab=99.90  E-value=5.6e-23  Score=202.74  Aligned_cols=282  Identities=11%  Similarity=0.041  Sum_probs=185.0

Q ss_pred             eeEEeEEEEecCCccccHHHHHHhcCCCcceeE--EeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEE
Q 013297            4 NVGILAMDIYFPPTCVQQEALEAHDGASKGKYT--IGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVG   81 (446)
Q Consensus         4 ~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~--~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~   81 (446)
                      ++.|.+.+...+     ..|.+.-.+..-+++.  ..+|++.     .++...+|+++|++++|+++|++++|||.||++
T Consensus        14 ~~~i~~~~~~~g-----~~E~~gpl~~~fd~~~~d~~fG~~t-----~e~a~sdLa~~Aa~~AL~~AGi~~~DID~II~g   83 (347)
T 3lma_A           14 PLFVNSSGTAVG-----PKEKEGPLGHLFDKSYDEMHCNQKN-----WEMAERKLMEDAVQSALSKQNLKKEDIDIFLAG   83 (347)
T ss_dssp             CCEEEEEEEEEC-----HHHHHSTTGGGSSEECSSTTTTSSS-----HHHHHHHHHHHHHHHHHHTTTCCGGGCSEEEEE
T ss_pred             CCEEEEEeeeeC-----chhhcCCchhhchhhhcccccCCcC-----ccHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence            467777777665     4555544444444442  2344432     256778999999999999999999999999999


Q ss_pred             eccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCccC-C---CC--
Q 013297           82 SETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYA-E---GP--  155 (446)
Q Consensus        82 T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~-~---~~--  155 (446)
                      |.++ +.  .++.++++.||+      ++||+.++|+|++.||.+|..+|++|.+  ++||||++|..+.. +   .+  
T Consensus        84 t~t~-q~--~~A~~va~~Lgi------pafdV~~ACsg~~~AL~~Aa~~I~sG~~--~~VLVVGaE~~S~aerq~r~p~e  152 (347)
T 3lma_A           84 DLLN-QN--VTANYVARHLKI------PFLCLFGACSTSMESIAISSALIDGGFA--KRALAATSSHNATAERQFRYPTE  152 (347)
T ss_dssp             ESSS-SS--TTHHHHHHHHCC------CEEEBCCSTTHHHHHHHHHHHHHHTTSC--SEEEEEEEECGGGTTCCC-----
T ss_pred             eCCC-ch--hHHHHHHHHhCC------CEEEecChhHHHHHHHHHHHHHHhcCCC--CEEEEEEeccccchhhhccCcch
Confidence            9998 33  378999999973      5899999999999999999999999977  99999999987421 1   11  


Q ss_pred             -------CCccccccceeeeeccCCCcccccccccccccccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHh
Q 013297          156 -------ARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKY  228 (446)
Q Consensus       156 -------~~~t~GdGAvA~Ll~~~~~~~~~~~~~g~~~~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~  228 (446)
                             ....++|||+|+||++.+.   .+++.+...-.+.|+     +..-|...|.    .--.+..+++.+.+++.
T Consensus       153 ~g~q~p~ta~~t~dGAGA~VL~~~g~---~p~I~~~t~Gkvvd~-----g~~d~~nmg~----amaPaA~~ti~~~l~d~  220 (347)
T 3lma_A          153 YGGQKPGTATSTVTGSGAVVLSQQPG---GIKITSATVGRVIDL-----GITDSQDMGS----AMAPAAADTIKQHLEDL  220 (347)
T ss_dssp             -----------CCCEEEEEEEESSCC---SEEEEEEECCCCBCC-----SCCCTTCHHH----HHHHHHHHHHHHHHHHH
T ss_pred             hcccCCchhcEEccceeEEEEEecCC---CCceeeeeeeeeecc-----CCCCCCCccc----cchHHHHHHHHHHHHHh
Confidence                   1133689999999997653   112222211122221     1111111121    00111123345555665


Q ss_pred             hhhhCCCCCcCCCceee---ccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhh
Q 013297          229 EKLEGKQFSLSNADYFV---FHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQL  305 (446)
Q Consensus       229 ~~~~~~~~~~~did~~i---~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~  305 (446)
                            +++++|+|+++   +|+.+.+|++++++++                        |++.++.|.|=-+       
T Consensus       221 ------g~~~~d~D~ivtgdL~q~g~~il~~l~~~~------------------------g~~~~~~~~dcg~-------  263 (347)
T 3lma_A          221 ------GRTPDDYDLILTGDLSGVGSPILKDLLKEE------------------------GINVGTKHNDCGL-------  263 (347)
T ss_dssp             ------TCCGGGCSEEEEESCHHHHHHHHHHHHHHT------------------------TCCCGGGEEEGGG-------
T ss_pred             ------CCCHHHcCEEecCChHHHHHHHHHHHHHHc------------------------CCChhHCccccce-------
Confidence                  89999999999   8899999999999888                        8888877765111       


Q ss_pred             hhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccce
Q 013297          306 AKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTA  363 (446)
Q Consensus       306 ~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~  363 (446)
                        ..|..    ...  -.-|-.|++.....|...+-+.-+....+||++++.|++++-
T Consensus       264 --~iy~~----~~~--~~~ggsg~~csa~v~~~~~~~~~~~g~~~ril~~~tGalls~  313 (347)
T 3lma_A          264 --MIYTP----DQQ--VFAGGSGCACSAVVTFAHIFKEIEAGRLNRVLVVATGALLSP  313 (347)
T ss_dssp             --TSSCC---------------CCCCHHHHHHHTHHHHHHTTSCSEEEEEEEEECCCH
T ss_pred             --EEecC----CCc--ccCCCCccccHHHHHHHHHHHHHhcCcccEEEEEecccccCc
Confidence              11110    100  245777788888888776544111135689999999999874

>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}

Probab=99.75  E-value=4.9e-17  Score=165.82  Aligned_cols=97  Identities=8%  Similarity=0.103  Sum_probs=90.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHH
Q 013297           49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV  128 (446)
Q Consensus        49 ~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~  128 (446)
                      .+++..+|+.+|++++|+++|+++++||.|++++.++....+.++..++..||+  ..+++++++..+|+|++.||..|.
T Consensus        25 ~~~~~~~L~~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~~~~~a~~~~~~lGl--~~~~p~~~v~~~Css~~~al~~A~  102 (395)
T 4e1l_A           25 KNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGI--PNSVPSYTVNKLCGSGLKSVQLAA  102 (395)
T ss_dssp             TTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECCCCSSTTCCHHHHHHHHTTC--CTTSCEEEECCGGGHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcchHHHHHHHHcCC--CCCceEEEccccchHHHHHHHHHH
Confidence            578999999999999999999999999999999999887788999999999998  557899999999999999999999


Q ss_pred             HHHHcCCCCCCEEEEEEeecC
Q 013297          129 NWVESSSWDGRYGLVVCTDSA  149 (446)
Q Consensus       129 ~~l~sg~~~~~~aLVVasD~~  149 (446)
                      .+|++|.+  ++|||+++|..
T Consensus       103 ~~I~~G~~--~~vlv~g~e~~  121 (395)
T 4e1l_A          103 QSITSGEN--DVVIAGGTENM  121 (395)
T ss_dssp             HHHHTTSC--SEEEEEEEEET
T ss_pred             HHHhCCCC--CEEEEEEEecc
Confidence            99999977  99999999865

>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}

Probab=99.74  E-value=3.6e-17  Score=166.73  Aligned_cols=97  Identities=6%  Similarity=0.114  Sum_probs=90.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHH
Q 013297           49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV  128 (446)
Q Consensus        49 ~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~  128 (446)
                      .+++..+|+.+|++++|+++|+++++||.|++++.++....+.++..++..||+  ..++++++++.+|+|++.||..|.
T Consensus        25 ~~~~~~~L~~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~~~~~a~~i~~~lGl--~~~~p~~~v~~aCss~~~al~~A~  102 (394)
T 3ss6_A           25 KNVTPVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTDEANTARTAALAAGF--PDTVTGYTIQRQCSSGMQAIMSAA  102 (394)
T ss_dssp             TTCCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCCGGGCSHHHHHHHHTTC--CTTCEEEEEECGGGHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHhHCCEEEEEEccCCCccchHHHHHHHHcCC--CCCceEEEecCcchHHHHHHHHHH
Confidence            578999999999999999999999999999999999887778899999999998  557999999999999999999999


Q ss_pred             HHHHcCCCCCCEEEEEEeecC
Q 013297          129 NWVESSSWDGRYGLVVCTDSA  149 (446)
Q Consensus       129 ~~l~sg~~~~~~aLVVasD~~  149 (446)
                      .+|++|.+  +++||+++|..
T Consensus       103 ~~I~~G~~--~~vlv~G~e~~  121 (394)
T 3ss6_A          103 MQIQLGVS--EVVVAGGVEAM  121 (394)
T ss_dssp             HHHHHTSC--SEEEEEEEEEC
T ss_pred             HHHhCCCC--CEEEEEEEhhc
Confidence            99999977  99999999875

>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}

Probab=99.74  E-value=8.5e-17  Score=164.07  Aligned_cols=98  Identities=11%  Similarity=0.101  Sum_probs=92.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHH
Q 013297           48 SEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC  127 (446)
Q Consensus        48 ~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A  127 (446)
                      .++++..+|+++|++++|+++|+++++||.|++++.+++...|.++..++..||+  .+++++++++.+|+|++.||..|
T Consensus        26 ~~~~~~~~L~~~A~~~AL~~agl~~~dId~vi~g~~~~~~~~~~~a~~v~~~lGl--~~~~p~~~v~~aCss~~~al~~A  103 (396)
T 4dd5_A           26 FKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGI--PVEKPAMTINIVCGSGLRSVSMA  103 (396)
T ss_dssp             TTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTC--CTTSCEEEECCGGGHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCCCCCchHHHHHHHHcCC--CCCceEEEeccccHHHHHHHHHH
Confidence            4678999999999999999999999999999999999988889999999999998  55799999999999999999999


Q ss_pred             HHHHHcCCCCCCEEEEEEeecC
Q 013297          128 VNWVESSSWDGRYGLVVCTDSA  149 (446)
Q Consensus       128 ~~~l~sg~~~~~~aLVVasD~~  149 (446)
                      ..+|++|.+  ++|||+++|..
T Consensus       104 ~~~I~~G~~--~~vLv~g~e~~  123 (396)
T 4dd5_A          104 SQLIALGDA--DIMLVGGAENM  123 (396)
T ss_dssp             HHHHHHTSC--SEEEEEEEEES
T ss_pred             HHHHhcCCC--CEEEEEEEecc
Confidence            999999977  99999999975

>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1

Probab=99.73  E-value=2.1e-16  Score=162.59  Aligned_cols=298  Identities=13%  Similarity=0.122  Sum_probs=185.7

Q ss_pred             CCceeEEeEEEEecCCccccHHHHHHhc--CCCc---------ceeEEeecceEEecC------CCC-----CCHHHHHH
Q 013297            1 MAKNVGILAMDIYFPPTCVQQEALEAHD--GASK---------GKYTIGLGQECMAFC------SEV-----EDVISMSL   58 (446)
Q Consensus         1 ~~~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~~---------~k~~~Glg~r~~av~------~~~-----Ed~~~lA~   58 (446)
                      |+++|-|.+++..+|.-. +.+++.+..  |.+.         +.+...++-. ..|.      ++.     .....|++
T Consensus         1 M~~~vaI~G~g~~~p~g~-~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~-~~fd~~~~~i~~~~~~~~d~~~~l~l   78 (424)
T 1tqy_A            1 MKRRVVITGVGVRAPGGN-GTRQFWELLTSGRTATRRISFFDPSPYRSQVAAE-ADFDPVAEGFGPRELDRMDRASQFAV   78 (424)
T ss_dssp             --CCEEEEEEEEEETTEE-SHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEEC-CCCCHHHHTCCHHHHHHSCHHHHHHH
T ss_pred             CCCCEEEEeeEEECCCCC-CHHHHHHHHHcCCCceeeCCCcccccCCcceeEE-eccCHhhcCCCHHHHHhcCHHHHHHH
Confidence            667899999999999885 777765543  3221         1110000000 0010      111     12467999


Q ss_pred             HHHHHHHHHCCCCcCCcc----EEEEEeccCCC---------------------------CCccH-HH----HHHHHhcc
Q 013297           59 TAVTNLLEKYKIDPKQIG----RLEVGSETVID---------------------------KSKSI-KT----FLMQIFEK  102 (446)
Q Consensus        59 ~Aa~~aL~~agi~~~dId----~li~~T~t~~~---------------------------~~ps~-a~----~l~~~LGl  102 (446)
                      +|++++|+++|+++++||    .|+++|.++.+                           ..|+. +.    +|+..||+
T Consensus        79 ~aa~~AL~dAG~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ia~~lgl  158 (424)
T 1tqy_A           79 ACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGA  158 (424)
T ss_dssp             HHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHHHHHHTC
T ss_pred             HHHHHHHHHCCCCchhcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccccccchhHhHHHHhcCC
Confidence            999999999999999999    68899876532                           11222 34    99999997


Q ss_pred             cCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecC-cc------------C--------------CCC
Q 013297          103 FGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-VY------------A--------------EGP  155 (446)
Q Consensus       103 ~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~-~y------------~--------------~~~  155 (446)
                        .  .+++++.++|++++.||..|..+|++|.+  +.+||+++|.. ..            .              ...
T Consensus       159 --~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~--d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~  232 (424)
T 1tqy_A          159 --E--GPVTMVSTGCTSGLDSVGNAVRAIEEGSA--DVMFAGAADTPITPIVVACFDAIRATTARNDDPEHASRPFDGTR  232 (424)
T ss_dssp             --C--SCEEEECCGGGHHHHHHHHHHHHHHHTSC--SEEEEEEEECCCSHHHHHHHHHTTCBCCCCSCGGGCCCTTBTTC
T ss_pred             --C--CceEeecCcccHHHHHHHHHHHHHHCCCC--CEEEEeeecccCCHHHHHHHHhhccccCCCCCCCCCccCCCCCC
Confidence              2  37899999999999999999999999987  99999999974 10            0              001


Q ss_pred             CCccccccceeeeeccCCCc-----cccccccccccc-ccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhh
Q 013297          156 ARPTGGAAAVVMLVGPDAPV-----AFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYE  229 (446)
Q Consensus       156 ~~~t~GdGAvA~Ll~~~~~~-----~~~~~~~g~~~~-~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~  229 (446)
                      +...+||||+|+||++.+..     .+...+.|+... +......       |..+|.        ...++++..+++. 
T Consensus       233 ~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~-------p~~~g~--------~~~~ai~~al~~a-  296 (424)
T 1tqy_A          233 DGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTG-------LKADGR--------EMAETIRVALDES-  296 (424)
T ss_dssp             CCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSC-------CCTTCH--------HHHHHHHHHHHHH-
T ss_pred             CceeeecceeEEEeccHHHHHhCCCcEEEEEeeeEEcCCCCCCCC-------CCCCHH--------HHHHHHHHHHHHc-
Confidence            23568999999999865310     000112232221 1111111       222332        2344556666665 


Q ss_pred             hhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhh
Q 013297          230 KLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPL  309 (446)
Q Consensus       230 ~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~  309 (446)
                           +++++||||+..|..++.+.+.+....+ ...+                  +...++                  
T Consensus       297 -----gl~~~dId~ve~Hgtgt~~gD~~E~~al-~~~f------------------~~~~~~------------------  334 (424)
T 1tqy_A          297 -----RTDATDIDYINAHGSGTRQNDRHETAAY-KRAL------------------GEHARR------------------  334 (424)
T ss_dssp             -----TCCGGGCCEEECCCCCCHHHHHHHHHHH-HHHT------------------GGGGGG------------------
T ss_pred             -----CCCHHHCCEEEecCccCcCcCHHHHHHH-HHHh------------------cccCCC------------------
Confidence                 7999999999999999987665432221 1000                  000000                  


Q ss_pred             hhhccCCCccccccccccccchHHHHHHHH---HHhcCCC------------------------CCCCEEEEEEeccccc
Q 013297          310 YDAKVQPSTLIPKQVGNMYTASLYAALASL---IHNKHSE------------------------LDGKRVVLFSYGSGLT  362 (446)
Q Consensus       310 ~~~~~~~s~~~~~~~GN~~saS~~l~L~~~---l~~~~~~------------------------~~G~~vll~syGsG~~  362 (446)
                          +.-+ .+-..+||+.+|+-.+.|..+   |++ +.+                        .+.++++..|||-|-+
T Consensus       335 ----~~v~-s~k~~~GH~~~AaG~~~l~~~~l~l~~-~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfG~GG~  408 (424)
T 1tqy_A          335 ----TPVS-SIKSMVGHSLGAIGSLEIAACVLALEH-GVVPPTANLRTSDPECDLDYVPLEARERKLRSVLTVGSGFGGF  408 (424)
T ss_dssp             ----SCEE-CTHHHHCBCTTTHHHHHHHHHHHHHHH-CEECCBTTCCSBBTTBCSCCCBSSCEECCCSEEEEEEEETTTE
T ss_pred             ----Ceee-ccccccccChhhhHHHHHHHHHHHHHc-CCcCCCCCCCCCCCCCCcccCCCcccCCCCCEEEEccccCCce
Confidence                0000 011467999999988887763   444 221                        1468899999999988


Q ss_pred             eeeEEEEE
Q 013297          363 ATMFSLKL  370 (446)
Q Consensus       363 ~~~~~l~~  370 (446)
                      ...++++.
T Consensus       409 n~~~vl~~  416 (424)
T 1tqy_A          409 QSAMVLRD  416 (424)
T ss_dssp             EEEEEEEC
T ss_pred             EEEEEEcc
Confidence            88877764

>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}

Probab=99.72  E-value=1.3e-15  Score=156.11  Aligned_cols=229  Identities=11%  Similarity=0.098  Sum_probs=149.1

Q ss_pred             CC-ceeEEeEEEEecCCccccHHHHHHhc--CCC---------cceeEEee-------cceEEecC----CCCCCHHHHH
Q 013297            1 MA-KNVGILAMDIYFPPTCVQQEALEAHD--GAS---------KGKYTIGL-------GQECMAFC----SEVEDVISMS   57 (446)
Q Consensus         1 ~~-~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~---------~~k~~~Gl-------g~r~~av~----~~~Ed~~~lA   57 (446)
                      |. +.|.|.+++.++|.- .+.+++.+..  |.+         .+.+...+       ..+.+ +.    ..-.....|+
T Consensus         1 M~~~~v~ItG~g~~~P~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~-i~~~~~~~~d~~~~l~   78 (413)
T 3o04_A            1 MDKRRVVVTGIGAVTPIG-NDAETSWENAKKGVNGVAKMTRLNPDDFPVKIAAELKDFDVEKY-LEKKEARKMDRFTHYA   78 (413)
T ss_dssp             CCCCCEEEEEEEEEBTTB-SSHHHHHHHHHTTCCCEEECCSSCGGGSSCCEEECCSSCCGGGT-SCHHHHTTSCHHHHHH
T ss_pred             CCCCCEEEEEeEEECCCC-CCHHHHHHHHHcCCCceeeCCccccccCccccccccCCCChhhc-cCHHHHhhCCHHHHHH
Confidence            44 469999999999987 5777765543  322         11110000       00000 00    0112356799


Q ss_pred             HHHHHHHHHHCCCCcCCcc----EEEEEeccC-----------------CCCCc---------cHHHHHHHHhcccCCCC
Q 013297           58 LTAVTNLLEKYKIDPKQIG----RLEVGSETV-----------------IDKSK---------SIKTFLMQIFEKFGNTD  107 (446)
Q Consensus        58 ~~Aa~~aL~~agi~~~dId----~li~~T~t~-----------------~~~~p---------s~a~~l~~~LGl~g~~~  107 (446)
                      ++|++++|+++|+++++||    .|+++|.++                 ....|         ..+.+|+..||+.    
T Consensus        79 l~Aa~~AL~dAGl~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~----  154 (413)
T 3o04_A           79 IASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGAK----  154 (413)
T ss_dssp             HHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHTCC----
T ss_pred             HHHHHHHHHHcCCChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhCCC----
Confidence            9999999999999999999    999998752                 22223         2388999999972    


Q ss_pred             ceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecC---------------c-----------cCCCCCCcccc
Q 013297          108 IEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA---------------V-----------YAEGPARPTGG  161 (446)
Q Consensus       108 ~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~---------------~-----------y~~~~~~~t~G  161 (446)
                      .+++++..+|+|++.||..|..+|++|.+  +.|||+++|..               +           |+...+..++|
T Consensus       155 gp~~~v~~aCss~~~Al~~A~~~I~~G~~--d~~lvgG~e~~~~~~~~~~~~~~~~ls~~~~p~~~~~pfd~~~~g~~~g  232 (413)
T 3o04_A          155 GINSTTVTACATATNSIGDAFKVIERGDA--DAMITGGAEAPITKMSLAGFTANKALSLNPDPETACRPFDKDRDGFIIG  232 (413)
T ss_dssp             SCEECCCCGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEECCCSHHHHHHHHHTTCBCCCCCTTTSCCTTBTTCCSBCBB
T ss_pred             CcceeecchhHHHHHHHHHHHHHHHcCCC--CEEEEeEEcccCCHHHHHHHHhcccccCCCCCCCCcCCCcCCCCCceEe
Confidence            37899999999999999999999999987  99999999972               1           01111235699


Q ss_pred             ccceeeeeccCCCc-----cccccccccccc-ccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCC
Q 013297          162 AAAVVMLVGPDAPV-----AFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQ  235 (446)
Q Consensus       162 dGAvA~Ll~~~~~~-----~~~~~~~g~~~~-~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~  235 (446)
                      |||+|+||++.+..     .+...+.|+... +.+....|       ..++        ....++++..+++.      +
T Consensus       233 dGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~-------~~~~--------~~~~~a~~~al~~a------g  291 (413)
T 3o04_A          233 EGAGIVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAP-------APNG--------EGAARAMKMAIDDA------G  291 (413)
T ss_dssp             CEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSC-------CGGG--------HHHHHHHHHHHHHH------T
T ss_pred             ccEEEEEEeeHHHHHhCCCeEEEEEEEEEEcCCCCCCCCC-------CCCH--------HHHHHHHHHHHHHc------C
Confidence            99999999874310     000112222211 11111111       1122        22345566666666      8


Q ss_pred             CCcCCCceeeccCcchHHHHHHH
Q 013297          236 FSLSNADYFVFHSPYNKLVQKSF  258 (446)
Q Consensus       236 ~~~~did~~i~H~p~~~~~~~~~  258 (446)
                      ++++|||++.+|..++.+.+...
T Consensus       292 l~~~dId~ve~HgtgT~~~d~~e  314 (413)
T 3o04_A          292 LTPDKVDYINAHGTSTPYNDEYE  314 (413)
T ss_dssp             CCGGGCCEEECCCCCCHHHHHHH
T ss_pred             CCHHHcCEEEEeCCcCcccCHHH
Confidence            99999999999999988776543

>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}

Probab=99.71  E-value=4e-16  Score=160.20  Aligned_cols=131  Identities=10%  Similarity=0.075  Sum_probs=94.1

Q ss_pred             cCCccccHHHHHHhcCC---Cccee----EEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCC
Q 013297           14 FPPTCVQQEALEAHDGA---SKGKY----TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVI   86 (446)
Q Consensus        14 ~P~~~v~~~~l~~~~g~---~~~k~----~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~   86 (446)
                      -|++.++|+++++..+.   +..++    ++.++.++. ....+++..+|+++|++++|+++|+++++||.|++++.++.
T Consensus        10 ~P~~~~~n~~~~~~~~~~~~~~v~Ivg~~rt~~g~~~~-~~~~~~~~~~L~~~Aa~~AL~dAgl~~~~id~v~~g~~~~~   88 (418)
T 2iik_A           10 GVDLGTENLYFQSMAPQASAADVVVVHGRRTAICRAGR-GGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQP   88 (418)
T ss_dssp             -----------------CCTTCEEEEEEEECCCEETTT-STTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECSSSB
T ss_pred             CCCccccHHHHHHHhhhccCCCeEEEeeeecCceecCC-CCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCc
Confidence            49999999999987653   33333    234443211 12468899999999999999999999999999999998887


Q ss_pred             CCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecC
Q 013297           87 DKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA  149 (446)
Q Consensus        87 ~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~  149 (446)
                      ...+..+..++..||+  ..+.++++++.+|+|++.||..|..+|++|.+  +.+||+++|..
T Consensus        89 ~~~~~~a~~~a~~lGl--~~~~p~~~v~~aCss~~~Al~~A~~~I~~G~~--d~vLv~G~e~~  147 (418)
T 2iik_A           89 GAGAIMARIAQFLSDI--PETVPLSTVNRQCSSGLQAVASIAGGIRNGSY--DIGMACGVESM  147 (418)
T ss_dssp             GGGHHHHHHHHHHTTC--CTTSCEEEEECGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEEET
T ss_pred             cccccHHHHHHHHcCC--CCCceEEEeCCCCHHHHHHHHHHHHHHHCCCC--CEEEEeccccC
Confidence            6566778888899997  45789999999999999999999999999977  99999999964

>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1

Probab=99.68  E-value=4.2e-15  Score=152.06  Aligned_cols=226  Identities=16%  Similarity=0.141  Sum_probs=146.4

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhc--CCCc----ceeE-EeecceEE---ecC-----C-----CCCCHHHHHHHHHH
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHD--GASK----GKYT-IGLGQECM---AFC-----S-----EVEDVISMSLTAVT   62 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~~----~k~~-~Glg~r~~---av~-----~-----~~Ed~~~lA~~Aa~   62 (446)
                      +.|-|.+++..+|--. +.+++.+..  |.+.    .++. .++..+.-   .+.     +     .-.....|+++|++
T Consensus         2 ~~v~I~G~g~~~p~g~-~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~d~~~~l~~~aa~   80 (408)
T 1j3n_A            2 RRVVVTGLGALTPIGV-GQEAFHKAQLAGKSGVRPITRFDASALPVRIAAEVDVDPGAYLDRKELRRLDRFVQYALIAAQ   80 (408)
T ss_dssp             CCEEEEEEEEEETTEE-SHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECCCCCGGGTSCHHHHTTSCHHHHHHHHHHH
T ss_pred             CCEEEEEeEEECCCCC-CHHHHHHHHHcCCCeeeeccccCcccCccceEEEEccChhhcCCHHHHHhcCHHHHHHHHHHH
Confidence            5799999999999874 666664432  3221    0000 00000000   011     0     11235789999999


Q ss_pred             HHHHHCCCCcCCccE----EEEEeccCCCC-------------------------Cc-cHHHHHHHHhcccCCCCceeee
Q 013297           63 NLLEKYKIDPKQIGR----LEVGSETVIDK-------------------------SK-SIKTFLMQIFEKFGNTDIEGVD  112 (446)
Q Consensus        63 ~aL~~agi~~~dId~----li~~T~t~~~~-------------------------~p-s~a~~l~~~LGl~g~~~~~~~d  112 (446)
                      ++|+++|+++++||.    ++++|.++.+.                         .+ ..+.+|+..||+   + .++++
T Consensus        81 ~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl---~-gp~~~  156 (408)
T 1j3n_A           81 LALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGF---T-GPSST  156 (408)
T ss_dssp             HHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC---C-SCBCC
T ss_pred             HHHHHcCCCccccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHHHHHhCC---C-CceeC
Confidence            999999999999984    77887765421                         12 468899999998   2 36889


Q ss_pred             eCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecC-cc------------C--------------CCCCCccccccce
Q 013297          113 STNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-VY------------A--------------EGPARPTGGAAAV  165 (446)
Q Consensus       113 i~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~-~y------------~--------------~~~~~~t~GdGAv  165 (446)
                      +.++|++++.||..|..+|++|.+  +.+||+++|.. ..            .              ...+...+||||+
T Consensus       157 v~~aCsS~l~Al~~A~~~I~~G~~--d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~dg~v~geGaa  234 (408)
T 1j3n_A          157 VVTACATGADALGSALRMIQLGEA--DLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSRDGFVMGEGAG  234 (408)
T ss_dssp             BCCGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTCCCBCBBCEEE
T ss_pred             ccCchHHHHHHHHHHHHHHHcCCC--CEEEEeeecccCCHHHHHHHHhcccccCCCCCCCcCcccCcCCCCceEEeeeEE
Confidence            999999999999999999999977  99999999973 10            1              1113457899999


Q ss_pred             eeeeccCCCc-----cccccccccccc-ccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcC
Q 013297          166 VMLVGPDAPV-----AFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLS  239 (446)
Q Consensus       166 A~Ll~~~~~~-----~~~~~~~g~~~~-~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~  239 (446)
                      |+||++.+..     .+...+.|+... +......|       ..++.        ....+++..+++.      +++++
T Consensus       235 avvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p-------~~~~~--------~~~~ai~~al~~A------gl~~~  293 (408)
T 1j3n_A          235 VLVLEAYEHAKKRGARIYAELVGFGRSADAHHITEP-------HPEGK--------GAALAMARALKDA------GIAPE  293 (408)
T ss_dssp             EEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCC-------CTTCH--------HHHHHHHHHHHHH------TCCGG
T ss_pred             EEEEeeHHHHHhCCCcEEEEEEEEEEcCCCCCCCCC-------CCCHH--------HHHHHHHHHHHHc------CCCHH
Confidence            9999864310     000112222211 11111222       12232        2334555666665      79999


Q ss_pred             CCceeeccCcchHHHHH
Q 013297          240 NADYFVFHSPYNKLVQK  256 (446)
Q Consensus       240 did~~i~H~p~~~~~~~  256 (446)
                      |||++..|..++++.+.
T Consensus       294 dId~ve~Hgtgt~~gD~  310 (408)
T 1j3n_A          294 QVGYINAHGTSTPVGDR  310 (408)
T ss_dssp             GCCEEECCCCSCHHHHH
T ss_pred             HcCEEEEeCCcCcccCH
Confidence            99999999999987554

>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}

Probab=99.68  E-value=1e-14  Score=150.52  Aligned_cols=227  Identities=13%  Similarity=0.114  Sum_probs=149.0

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhc--CCCc----cee-EEeecceEEe----c-----CCCC-----CCHHHHHHHHH
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHD--GASK----GKY-TIGLGQECMA----F-----CSEV-----EDVISMSLTAV   61 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~~----~k~-~~Glg~r~~a----v-----~~~~-----Ed~~~lA~~Aa   61 (446)
                      ++|.|.+++..+|.- .+.+++.+..  |.+.    .++ ..++..+...    |     .++.     .....|+++|+
T Consensus        28 ~~vaI~G~g~~~P~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~i~~fd~~~~~~~~~~~~~d~~~~l~l~aa  106 (437)
T 2gqd_A           28 KRVVITGMGALSPIG-NDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDHIDKKEARRMDRFTQYAIVAA  106 (437)
T ss_dssp             CCEEEEEEEEEBTTB-SSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCSSCCGGGTSCSTTTTTSCHHHHHHHHHH
T ss_pred             CCEEEEEeeEECCCC-CCHHHHHHHHHcCCCceeeCCccccccCccceeEEeCCCChhcCCCHHHHHhcCHHHHHHHHHH
Confidence            469999999999988 4666665432  3221    000 0000011100    0     0111     12568999999


Q ss_pred             HHHHHHCCCCcCCcc----EEEEEeccCCC-----------------C---------CccHHHHHHHHhcccCCCCceee
Q 013297           62 TNLLEKYKIDPKQIG----RLEVGSETVID-----------------K---------SKSIKTFLMQIFEKFGNTDIEGV  111 (446)
Q Consensus        62 ~~aL~~agi~~~dId----~li~~T~t~~~-----------------~---------~ps~a~~l~~~LGl~g~~~~~~~  111 (446)
                      +++|+++|+++++||    .|+++|.++..                 .         ...++.+|+..||+   . .+++
T Consensus       107 ~~AL~dAGl~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl---~-gp~~  182 (437)
T 2gqd_A          107 REAVKDAQLDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGA---K-GPNG  182 (437)
T ss_dssp             HHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC---C-SSEE
T ss_pred             HHHHHHcCCCccccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHhCC---C-CceE
Confidence            999999999999999    99999876541                 1         12578899999998   2 2678


Q ss_pred             eeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecC-c-c------------------------CCCCCCccccccce
Q 013297          112 DSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-V-Y------------------------AEGPARPTGGAAAV  165 (446)
Q Consensus       112 di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~-~-y------------------------~~~~~~~t~GdGAv  165 (446)
                      ++.++|++++.||..|..+|++|.+  +.|||+++|.. . +                        +...+...+||||+
T Consensus       183 ~v~~aCsS~l~Al~~A~~~I~~G~~--d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~p~~~~~pfd~~~~G~v~geGaa  260 (437)
T 2gqd_A          183 ATVTACATGTNSIGEAFKIVQRGDA--DAMITGGTEAPITHMAIAGFSASRALSTNDDIETACRPFQEGRDGFVMGEGAG  260 (437)
T ss_dssp             CBCCGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEECCCSHHHHHHHHHTTCBCCCCCTTTSSCTTCTTCCSBCBBCEEE
T ss_pred             EecCCccHHHHHHHHHHHHHHcCCC--CEEEEeeeccccCHHHHHHHHhccCccCCCCCccccCCCCCCCCCceeeceEE
Confidence            9999999999999999999999987  99999999973 1 0                        11112356899999


Q ss_pred             eeeeccCCCc-----cccccccccccc-ccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcC
Q 013297          166 VMLVGPDAPV-----AFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLS  239 (446)
Q Consensus       166 A~Ll~~~~~~-----~~~~~~~g~~~~-~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~  239 (446)
                      |+||++.+..     .+...+.|+... +...+..|       ..+|.        ...++++..+++.      +++++
T Consensus       261 avvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p-------~~~~~--------~~~~ai~~Al~~A------gl~p~  319 (437)
T 2gqd_A          261 ILVIESLESAQARGANIYAEIVGYGTTGDAYHITAP-------APEGE--------GGSRAMQAAMDDA------GIEPK  319 (437)
T ss_dssp             EEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSC-------CGGGH--------HHHHHHHHHHHHH------TCCGG
T ss_pred             EEEECcHHHHHhCCCceEEEEEEEEecCCCCCCCCC-------CCCHH--------HHHHHHHHHHHHc------CCCHh
Confidence            9999864310     000112232221 11111222       11222        2344566666665      79999


Q ss_pred             CCceeeccCcchHHHHHH
Q 013297          240 NADYFVFHSPYNKLVQKS  257 (446)
Q Consensus       240 did~~i~H~p~~~~~~~~  257 (446)
                      ||||+.+|+.++++.+.+
T Consensus       320 dId~ve~HgtgT~~~D~~  337 (437)
T 2gqd_A          320 DVQYLNAHGTSTPVGDLN  337 (437)
T ss_dssp             GCCEEECCCCSCHHHHHH
T ss_pred             hCCEEEEECCCCcCcCHH
Confidence            999999999999987644

>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A

Probab=99.68  E-value=8.1e-15  Score=150.99  Aligned_cols=226  Identities=13%  Similarity=0.074  Sum_probs=147.8

Q ss_pred             eeEEeEEEEecCCccccHHHHHHhc--CCCc----cee-EEeecceEEecC---------CCC-----CCHHHHHHHHHH
Q 013297            4 NVGILAMDIYFPPTCVQQEALEAHD--GASK----GKY-TIGLGQECMAFC---------SEV-----EDVISMSLTAVT   62 (446)
Q Consensus         4 ~vgI~~i~~y~P~~~v~~~~l~~~~--g~~~----~k~-~~Glg~r~~av~---------~~~-----Ed~~~lA~~Aa~   62 (446)
                      +|.|.+++..+|.. .+.+++.+..  |.+.    .++ ..++..+.....         ++.     .....|+++|++
T Consensus        24 ~v~ItG~g~~~P~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~d~~~~l~l~aa~  102 (430)
T 1ox0_A           24 RVVVTGYGVTSPIG-NTPEEFWNSLATGKIGIGGITKFDHSDFDVHNAAEIQDFPFDKYFVKKDTNRFDNYSLYALYAAQ  102 (430)
T ss_dssp             CEEEEEEEEEBTTB-SSHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECCSSCCHHHHCCGGGGGTCCHHHHHHHHHHH
T ss_pred             CEEEEEEEEECCCc-CCHHHHHHHHHcCCCeeeeCCcccccCCccceeeeccCCChhhcCCHHHHHhcCHHHHHHHHHHH
Confidence            59999999999987 5666665433  3221    001 001111111100         111     124689999999


Q ss_pred             HHHHHCCCCcCCcc----EEEEEeccCCC---------------------CCc-----cHHHHHHHHhcccCCCCceeee
Q 013297           63 NLLEKYKIDPKQIG----RLEVGSETVID---------------------KSK-----SIKTFLMQIFEKFGNTDIEGVD  112 (446)
Q Consensus        63 ~aL~~agi~~~dId----~li~~T~t~~~---------------------~~p-----s~a~~l~~~LGl~g~~~~~~~d  112 (446)
                      ++|+++|+++++||    .|+++|.++..                     ..|     .++.+|+..||+  .  .++++
T Consensus       103 ~AL~dAG~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl--~--Gp~~~  178 (430)
T 1ox0_A          103 EAVNHANLDVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGA--N--GVCKS  178 (430)
T ss_dssp             HHHHHTTCCTTTSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC--C--SCEEC
T ss_pred             HHHHHcCCChhhcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhcC--C--CceEe
Confidence            99999999999999    58888876541                     111     468899999998  2  37899


Q ss_pred             eCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCc-c------------C-----C--------CCCCcccccccee
Q 013297          113 STNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-Y------------A-----E--------GPARPTGGAAAVV  166 (446)
Q Consensus       113 i~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-y------------~-----~--------~~~~~t~GdGAvA  166 (446)
                      +.++|++++.||..|..+|++|.+  +.+||+++|... .            .     +        ..+...+||||+|
T Consensus       179 v~~aCsS~l~Al~~A~~~I~~G~~--d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~p~~~~~pFd~~~~g~~~geGAaa  256 (430)
T 1ox0_A          179 INTACSSSNDAIGDAFRSIKFGFQ--DVMLVGGTEASITPFAIAGFQALTALSTTEDPTRASIPFDKDRNGFVMGEGSGM  256 (430)
T ss_dssp             CCCGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEECCCSHHHHHHHHHTTCBCCCSSTTSSSCTTBTTCCSBCBCCEEEE
T ss_pred             ecCchHHHHHHHHHHHHHHHcCCC--CEEEEeeeccccCHHHHHHHHhCCCccCCCCCCCCCCCCCCCCCCccccceEEE
Confidence            999999999999999999999977  999999999741 0            0     0        1123568999999


Q ss_pred             eeeccCCCc-----ccccccccccc-cccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCC
Q 013297          167 MLVGPDAPV-----AFESKLRGSHM-SHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSN  240 (446)
Q Consensus       167 ~Ll~~~~~~-----~~~~~~~g~~~-~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~d  240 (446)
                      +||++.+..     .+...+.|+.. .+......|.       .++.        ....+++..+++.      +++++|
T Consensus       257 vvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~-------~~~~--------~~~~ai~~al~~A------gl~~~d  315 (430)
T 1ox0_A          257 LVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPH-------PEGQ--------GAIKAIKLALEEA------EISPEQ  315 (430)
T ss_dssp             EEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCC-------TTCH--------HHHHHHHHHHHHH------TCCGGG
T ss_pred             EEECcHHHHHhCCCceEEEEEEEEEecCCCCCCCCC-------CChH--------HHHHHHHHHHHHh------CcCHHH
Confidence            999864310     00011222211 1111122221       1222        2344566666665      799999


Q ss_pred             CceeeccCcchHHHHHH
Q 013297          241 ADYFVFHSPYNKLVQKS  257 (446)
Q Consensus       241 id~~i~H~p~~~~~~~~  257 (446)
                      ||++..|..+..+.+..
T Consensus       316 Id~ve~Hgtgt~~~D~~  332 (430)
T 1ox0_A          316 VAYVNAHGTSTPANEKG  332 (430)
T ss_dssp             CCCEECCCCSCHHHHHH
T ss_pred             cCEEEEeCCcCcccCHH
Confidence            99999999999887654

>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1

Probab=99.67  E-value=1.8e-14  Score=147.81  Aligned_cols=228  Identities=11%  Similarity=0.091  Sum_probs=148.6

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhc--CCCc----cee-EEeecceEEecCC---C-----------CCCHHHHHHHHH
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHD--GASK----GKY-TIGLGQECMAFCS---E-----------VEDVISMSLTAV   61 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~~----~k~-~~Glg~r~~av~~---~-----------~Ed~~~lA~~Aa   61 (446)
                      ++|.|.+++..+|.- .+.+++.+..  |.+.    .++ ..++..+.....+   +           -.....|+++|+
T Consensus         7 ~~v~I~G~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~i~~fd~~~~~~~~~~~~~d~~~~l~l~aa   85 (416)
T 1e5m_A            7 KRVVVTGLGAITPIG-NTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQFLDRKEAKRMDRFCHFAVCAS   85 (416)
T ss_dssp             CCEEEEEEEEEBTTB-SSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCCSCCGGGTSCHHHHHTSCHHHHHHHHHH
T ss_pred             CCEEEEeeeEECCCC-CCHHHHHHHHHcCCCeEeeCCccccccCccceeEEeCCCCccccCCHHHHHhcCHHHHHHHHHH
Confidence            359999999999988 4666655443  3221    001 0011111111110   0           012358999999


Q ss_pred             HHHHHHCCCCcCCcc----EEEEEeccCCC-----------------CC---------ccHHHHHHHHhcccCCCCceee
Q 013297           62 TNLLEKYKIDPKQIG----RLEVGSETVID-----------------KS---------KSIKTFLMQIFEKFGNTDIEGV  111 (446)
Q Consensus        62 ~~aL~~agi~~~dId----~li~~T~t~~~-----------------~~---------ps~a~~l~~~LGl~g~~~~~~~  111 (446)
                      +++|+++|+++++||    .|+++|.++..                 ..         ..++.+|+..||+    +.+++
T Consensus        86 ~~Al~dAg~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl----~gp~~  161 (416)
T 1e5m_A           86 QQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGA----KGPNN  161 (416)
T ss_dssp             HHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC----CSCEE
T ss_pred             HHHHHHcCCChhhcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHhCC----CCcee
Confidence            999999999999999    79999876531                 11         1468899999997    23689


Q ss_pred             eeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecC-c-c-----------C--------------CCCCCccccccc
Q 013297          112 DSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-V-Y-----------A--------------EGPARPTGGAAA  164 (446)
Q Consensus       112 di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~-~-y-----------~--------------~~~~~~t~GdGA  164 (446)
                      ++.++|++++.||..|..+|++|.+  +.+||+++|.. . .           .              ...+...+||||
T Consensus       162 ~v~~aCsS~l~Al~~A~~~I~~G~~--d~~LvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~geGa  239 (416)
T 1e5m_A          162 CTVTACAAGSNAIGDAFRLVQNGYA--KAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRDGFVMGEGS  239 (416)
T ss_dssp             CCCCGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCGGGTCCTTBTTCCSBCBBCEE
T ss_pred             CccchhHHHHHHHHHHHHHHHcCCC--CEEEEeeecccCCHHHHHHHHHcCCccCCCCCCccccccCccCCCCceeeeeE
Confidence            9999999999999999999999977  99999999963 1 1           0              011235689999


Q ss_pred             eeeeeccCCCc-----cccccccccccc-ccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCc
Q 013297          165 VVMLVGPDAPV-----AFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSL  238 (446)
Q Consensus       165 vA~Ll~~~~~~-----~~~~~~~g~~~~-~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~  238 (446)
                      +|+||++.+..     .+...+.|+... +...+..|       ..+|.        ...++++..+++.      ++++
T Consensus       240 aavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p-------~~~~~--------~~~~ai~~al~~a------gl~~  298 (416)
T 1e5m_A          240 GILILEELESALARGAKIYGEMVGYAMTCDAYHITAP-------VPDGR--------GATRAIAWALKDS------GLKP  298 (416)
T ss_dssp             EEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSC-------CTTCH--------HHHHHHHHHHHHH------TCCG
T ss_pred             EEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCC-------CCCHH--------HHHHHHHHHHHHc------CCCH
Confidence            99999864310     000112232221 11112222       12332        2344566666665      7999


Q ss_pred             CCCceeeccCcchHHHHHHH
Q 013297          239 SNADYFVFHSPYNKLVQKSF  258 (446)
Q Consensus       239 ~did~~i~H~p~~~~~~~~~  258 (446)
                      +|||++..|+.++++.+.+.
T Consensus       299 ~dId~ve~Hgtgt~~~D~~E  318 (416)
T 1e5m_A          299 EMVSYINAHGTSTPANDVTE  318 (416)
T ss_dssp             GGCCEEECCCCSCHHHHHHH
T ss_pred             hHCCEEEEECCCCcCcCHHH
Confidence            99999999999998776543

>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A

Probab=99.65  E-value=2e-14  Score=147.92  Aligned_cols=226  Identities=12%  Similarity=0.084  Sum_probs=145.2

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhc--CCCc----ceeE-EeecceEEe-cCC--C-----------CCCHHHHHHHHH
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHD--GASK----GKYT-IGLGQECMA-FCS--E-----------VEDVISMSLTAV   61 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~~----~k~~-~Glg~r~~a-v~~--~-----------~Ed~~~lA~~Aa   61 (446)
                      ++|-|.+++..+|.- .+.+++.+..  |.+.    .++. .++..+.-. +.+  .           -.....|+++|+
T Consensus        18 ~~v~I~G~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~i~~~~~~~~d~~~~l~l~aa   96 (427)
T 3ho9_A           18 RRVVVTGLGMLSPVG-NTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDIISRKEQRKMDAFIQYGIVAG   96 (427)
T ss_dssp             CCEEEEEEEEEBTTB-SSHHHHHHHHHTTCCCEEECCSSCCTTCSCCEEECCSSCCCTTTSCHHHHTTSCHHHHHHHHHH
T ss_pred             CCEEEEeeeEECCCC-CCHHHHHHHHHcCCCceeeCCccccccCccceeeEcCCCChhhcCCHHHHhhCCHHHHHHHHHH
Confidence            579999999999987 4666665543  3221    0000 011111100 100  0           012467999999


Q ss_pred             HHHHHHCCCCcCCcc----EEEEEeccCC--------------------------CCCccHHHHHHHHhcccCCCCceee
Q 013297           62 TNLLEKYKIDPKQIG----RLEVGSETVI--------------------------DKSKSIKTFLMQIFEKFGNTDIEGV  111 (446)
Q Consensus        62 ~~aL~~agi~~~dId----~li~~T~t~~--------------------------~~~ps~a~~l~~~LGl~g~~~~~~~  111 (446)
                      +++|+++|+++++||    .++++|.++.                          ...+..+.+|...||+.    .+++
T Consensus        97 ~~AL~dAGl~~~~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~----Gp~~  172 (427)
T 3ho9_A           97 VQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLR----GPSI  172 (427)
T ss_dssp             HHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCC----SCEE
T ss_pred             HHHHHHCCCCcccccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHHHHHHHHhCCC----CCee
Confidence            999999999999999    5888887531                          11235688999999982    3689


Q ss_pred             eeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCcc---------------------------CCCCCCccccccc
Q 013297          112 DSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY---------------------------AEGPARPTGGAAA  164 (446)
Q Consensus       112 di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y---------------------------~~~~~~~t~GdGA  164 (446)
                      ++..||++++.||..|..+|++|.+  +.|||+++|...-                           +...+..++||||
T Consensus       173 ~v~taCsS~l~Al~~A~~~I~~G~~--d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~v~geGA  250 (427)
T 3ho9_A          173 SIATAATSGVHNIGHAARIIAYGDA--DVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGA  250 (427)
T ss_dssp             CCCCGGGHHHHHHHHHHHHHHHTSC--SEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTCCSBCBBCEE
T ss_pred             cccchhHHHHHHHHHHHHHHHcCCC--CEEEEeeecccCCHHHHHHHHhccCcccCCCCCCcccCCccCCCCCceeeeeE
Confidence            9999999999999999999999987  9999999998620                           0111235689999


Q ss_pred             eeeeeccCCC-----ccccccccccccc-ccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCc
Q 013297          165 VVMLVGPDAP-----VAFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSL  238 (446)
Q Consensus       165 vA~Ll~~~~~-----~~~~~~~~g~~~~-~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~  238 (446)
                      +|+||++.+.     ..+...+.|+... +......|.       .++.        ....+++..+++.      ++++
T Consensus       251 aavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~-------~~~~--------~~~~ai~~al~~A------gl~~  309 (427)
T 3ho9_A          251 GMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPP-------ENGA--------GAALAMANALRDA------GIEA  309 (427)
T ss_dssp             EEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSBTTBCC-------TTCH--------HHHHHHHHHHHHH------TCCG
T ss_pred             EEEEEccHHHHHHCCCcEEEEEEEEeecCCCCCcCCCC-------CCHH--------HHHHHHHHHHHHc------CCCH
Confidence            9999987421     0000112232221 111122221       1222        2234555666665      8999


Q ss_pred             CCCceeeccCcchHHHHH
Q 013297          239 SNADYFVFHSPYNKLVQK  256 (446)
Q Consensus       239 ~did~~i~H~p~~~~~~~  256 (446)
                      +|||++..|..++...+.
T Consensus       310 ~dId~ve~HgtgT~~~d~  327 (427)
T 3ho9_A          310 SQIGYVNAHGTSTPAGDK  327 (427)
T ss_dssp             GGCCEEECCCCSCHHHHH
T ss_pred             HHccEEEecCCcCCCcCH
Confidence            999999999666655443

>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A

Probab=99.64  E-value=4.7e-14  Score=145.19  Aligned_cols=172  Identities=16%  Similarity=0.143  Sum_probs=118.2

Q ss_pred             HHHHHHHHHHHHHHHCCCCcCC-cc----EEEEEeccC--------------------------CCCCccHHHHHHHHhc
Q 013297           53 VISMSLTAVTNLLEKYKIDPKQ-IG----RLEVGSETV--------------------------IDKSKSIKTFLMQIFE  101 (446)
Q Consensus        53 ~~~lA~~Aa~~aL~~agi~~~d-Id----~li~~T~t~--------------------------~~~~ps~a~~l~~~LG  101 (446)
                      ...|+++|++++|+++|+++++ ||    .++++|..+                          ....+..+.+|...||
T Consensus        87 ~~~l~l~aa~~AL~dAGl~~~~~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg  166 (428)
T 3kzu_A           87 FIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIKHK  166 (428)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTCTTHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhcCCChhhhccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccchhhhHHHHHHHHcC
Confidence            5789999999999999999998 87    577777532                          2234457889999999


Q ss_pred             ccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCc-------------cC---------------C
Q 013297          102 KFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-------------YA---------------E  153 (446)
Q Consensus       102 l~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-------------y~---------------~  153 (446)
                      +    +.+++++..+|++++.||..|..+|++|.+  +.+||+++|...             ..               .
T Consensus       167 l----~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~--d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~  240 (428)
T 3kzu_A          167 L----RGPNHSVVTACATGTHAIGDAARLIAFGDA--DVMVAGGTESPVSRISLAGFAACKALSTERNDDPTAASRPYDE  240 (428)
T ss_dssp             C----CSCEECBCCGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGTCCTTBT
T ss_pred             C----CCceeeecCccHHHHHHHHHHHHHHHCCCC--CEEEEeeecCcCCHHHHHHHHHccccccCccCCcccccCCccc
Confidence            8    236889999999999999999999999987  999999999720             00               0


Q ss_pred             CCCCccccccceeeeeccCCCc-----cccccccccccc-ccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHH
Q 013297          154 GPARPTGGAAAVVMLVGPDAPV-----AFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSK  227 (446)
Q Consensus       154 ~~~~~t~GdGAvA~Ll~~~~~~-----~~~~~~~g~~~~-~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~  227 (446)
                      ..+...+||||+|+||++.+..     .+...+.|+... +......|       ..++.        ....+++..+++
T Consensus       241 ~~~G~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p-------~~~~~--------~~~~ai~~al~~  305 (428)
T 3kzu_A          241 DRDGFVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAP-------TESGE--------GAQRCMVAALKR  305 (428)
T ss_dssp             TCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSC-------CTTCH--------HHHHHHHHHHHH
T ss_pred             CCCceeecCceEEEEEccHHHHHhCCCceEEEEEEEEEccCCCCCCCC-------CCCHH--------HHHHHHHHHHHH
Confidence            1123468999999999874310     000112222211 11111222       22222        223455666666


Q ss_pred             hhhhhCCCCCcCCCceeeccCcch
Q 013297          228 YEKLEGKQFSLSNADYFVFHSPYN  251 (446)
Q Consensus       228 ~~~~~~~~~~~~did~~i~H~p~~  251 (446)
                      .      +++++|||++..|-.++
T Consensus       306 A------gl~~~dId~ve~HgtgT  323 (428)
T 3kzu_A          306 A------GIVPDEIDYINAHGTST  323 (428)
T ss_dssp             H------TCCGGGCCEEECCCCSS
T ss_pred             c------CCCHHHeeEEEecCCcc
Confidence            5      89999999999994433

>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}

Probab=99.63  E-value=7.2e-15  Score=150.27  Aligned_cols=97  Identities=15%  Similarity=0.124  Sum_probs=81.9

Q ss_pred             CCCCHHHHHHHHHHHHHHH-CCCCcCCccEEEEEeccCCCC-CccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHH
Q 013297           49 EVEDVISMSLTAVTNLLEK-YKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFN  126 (446)
Q Consensus        49 ~~Ed~~~lA~~Aa~~aL~~-agi~~~dId~li~~T~t~~~~-~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~  126 (446)
                      .+++..+|+.+|++++|++ +|+++++||.|++++.++... .+.++..++..||+  +..+++++++.+|+|++.||..
T Consensus        28 ~~~~~~~L~~~A~~~AL~~~AGl~~~dId~vi~g~~~~~~~~~~~~a~~va~~lGl--p~~~pa~~v~~~Css~~~Al~~  105 (407)
T 3svk_A           28 TEVKPLNLVVGLVDELRRRYPDLDETLISDMILGVVSPVGDQGGDIARTAVLAAGL--PETTGGVQLNRFCASGLEAVNT  105 (407)
T ss_dssp             TTSCHHHHHHHHHHHHHHHSTTCCGGGEEEEEEECC--------CHHHHHHHHTTC--CTTCEEEEEC---CBSCCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHhhhcCcCHHHCCEEEEEecCccccccCcHHHHHHHHcCC--CCCCceEEecCcChhHHHHHHH
Confidence            4788999999999999999 999999999999999887653 57889999999998  5689999999999999999999


Q ss_pred             HHHHHHcCCCCCCEEEEEEeecC
Q 013297          127 CVNWVESSSWDGRYGLVVCTDSA  149 (446)
Q Consensus       127 A~~~l~sg~~~~~~aLVVasD~~  149 (446)
                      |..+|++|.+  +.|||+++|..
T Consensus       106 A~~~I~sG~~--d~vLv~G~e~~  126 (407)
T 3svk_A          106 AAQKVRSGWD--DLVLAGGVESM  126 (407)
T ss_dssp             HHHHHHHTSC--CEEEEEEEECC
T ss_pred             HHHHHHcCCC--CEEEEEEEccc
Confidence            9999999987  99999999975

>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}

Probab=99.63  E-value=9.8e-14  Score=142.09  Aligned_cols=225  Identities=12%  Similarity=0.092  Sum_probs=147.5

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhc--CCCcc----eeE-E-eecceEEe----cCCC----------CCCHHHHHHHH
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHD--GASKG----KYT-I-GLGQECMA----FCSE----------VEDVISMSLTA   60 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~~~----k~~-~-Glg~r~~a----v~~~----------~Ed~~~lA~~A   60 (446)
                      ++|-|.+++..+|.- .+.+++.+..  |.+.-    .+. . ++..+...    +...          -.....|+++|
T Consensus         6 ~~v~ItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~v~~fd~~~~i~~~~~~~~d~~~~l~l~a   84 (412)
T 4ewg_A            6 KRVVITGMGGVTALG-SRWDEIEAALKAGRNAVRRMPDWDYFESLHTRLAAPLPGFAQPADWPRKKTRSMGRVSMYAVRA   84 (412)
T ss_dssp             CCEEEEEEEEEBTTB-SSHHHHHHHHHHTCCCCEECGGGGGSSSCCCCEEBCCSCCCCCTTSCHHHHTTCCHHHHHHHHH
T ss_pred             CEEEEEeeEEECCCc-CCHHHHHHHHHcCCCceeeCCccccccCCccceeeecCCCChhhhCCHHHHhhCCHHHHHHHHH
Confidence            479999999999986 4666665543  32210    000 0 11111111    1000          12356799999


Q ss_pred             HHHHHHHCCC-CcCCcc----EEEEEeccCC--------------------------CCCccHHHHHHHHhcccCCCCce
Q 013297           61 VTNLLEKYKI-DPKQIG----RLEVGSETVI--------------------------DKSKSIKTFLMQIFEKFGNTDIE  109 (446)
Q Consensus        61 a~~aL~~agi-~~~dId----~li~~T~t~~--------------------------~~~ps~a~~l~~~LGl~g~~~~~  109 (446)
                      ++++|+++|+ ++++||    .++++|.++.                          ...+.++.+|+..||+    +.+
T Consensus        85 a~~Al~dAGl~~~~~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl----~gp  160 (412)
T 4ewg_A           85 SELALADAGFAGDESISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWDL----KGR  160 (412)
T ss_dssp             HHHHHHHHTCTTCGGGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHHTTC----CSC
T ss_pred             HHHHHHhcCCCCccccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHHhCC----CCC
Confidence            9999999999 788888    8888877632                          1123578899999997    237


Q ss_pred             eeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCcc--------------------------CCCCCCcccccc
Q 013297          110 GVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY--------------------------AEGPARPTGGAA  163 (446)
Q Consensus       110 ~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y--------------------------~~~~~~~t~GdG  163 (446)
                      ++++..+|++++.||..|..+|++|.+  +.+||+++|..+.                          +...+...+|||
T Consensus       161 ~~~v~~aCsS~l~Al~~A~~~I~~G~~--d~~LvgG~e~~s~~~~~~~~~~~~l~~~~~~p~~~~rpfd~~~~G~~~geG  238 (412)
T 4ewg_A          161 IVPTSSACASGSQAIGYAYENIAMGKQ--TLMLAGGAEELSGPAVAVFDTLYATSTRNDEPHLTPRPFDAKRDGLVVGEG  238 (412)
T ss_dssp             EEECCCGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEECCCHHHHHHHHTTTCBCCCTTCGGGCCCTTBTTCCCBCBBCE
T ss_pred             cccccchhHHHHHHHHHHHHHHHcCCC--CEEEEeccccCCHHHHHHHHHhhccccCCCCCCCCCCCCCCCCCCCceECe
Confidence            899999999999999999999999987  9999999997521                          001112458999


Q ss_pred             ceeeeeccCCCc-----cccccccccccc-ccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCC
Q 013297          164 AVVMLVGPDAPV-----AFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFS  237 (446)
Q Consensus       164 AvA~Ll~~~~~~-----~~~~~~~g~~~~-~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~  237 (446)
                      |+|+||++.+..     .+...+.|+... +...+..|         +        .....++++..+++.      +++
T Consensus       239 AaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p---------~--------~~~~~~ai~~Al~~A------gl~  295 (412)
T 4ewg_A          239 AATLVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQP---------T--------ASTMARAMQLALEDA------KLD  295 (412)
T ss_dssp             EEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSSC---------C--------HHHHHHHHHHHHHHT------TCC
T ss_pred             EEEEEEccHHHHhhCCCcEEEEEEEEEEcCCCCCCCCC---------C--------HHHHHHHHHHHHHHc------CCC
Confidence            999999874310     011112232221 11112222         1        123345666666665      899


Q ss_pred             cCCCceeeccCcchHHHHHH
Q 013297          238 LSNADYFVFHSPYNKLVQKS  257 (446)
Q Consensus       238 ~~did~~i~H~p~~~~~~~~  257 (446)
                      ++|||++..|..++.+.+..
T Consensus       296 ~~dId~ve~Hgtgt~~~D~~  315 (412)
T 4ewg_A          296 ANAIAYVNAHGTSTDRGDVA  315 (412)
T ss_dssp             GGGEEEEECCCCCCHHHHHH
T ss_pred             HHHCCEEEccCCCCccccHH
Confidence            99999999999998877654

>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}

Probab=99.62  E-value=1.6e-14  Score=146.78  Aligned_cols=97  Identities=12%  Similarity=0.105  Sum_probs=89.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHC-CCCcCCccEEEEEeccCCCC-CccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHH
Q 013297           49 EVEDVISMSLTAVTNLLEKY-KIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFN  126 (446)
Q Consensus        49 ~~Ed~~~lA~~Aa~~aL~~a-gi~~~dId~li~~T~t~~~~-~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~  126 (446)
                      .+++..+|+.+|++++|+++ |+++++||.|++++.+++.. .+.++.+++..+|+  ...+++++++.+|+|++.||..
T Consensus        23 ~~~~~~~L~~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~~~a~~~~~~~Gl--~~~~p~~~v~~aCss~l~Al~~  100 (387)
T 3goa_A           23 RNVRAEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEI--PHSVPAVTVNRLCGSSMQALHD  100 (387)
T ss_dssp             TTSCHHHHHHHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTC--CTTSCCEEEECGGGHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEEcccCCcccccHHHHHHHHHcCC--CCCCcEeEecCcchHHHHHHHH
Confidence            36889999999999999999 99999999999999988765 67899999999997  5578999999999999999999


Q ss_pred             HHHHHHcCCCCCCEEEEEEeecC
Q 013297          127 CVNWVESSSWDGRYGLVVCTDSA  149 (446)
Q Consensus       127 A~~~l~sg~~~~~~aLVVasD~~  149 (446)
                      |..+|++|.+  +.+||+++|..
T Consensus       101 A~~~I~sG~~--d~vLv~G~e~~  121 (387)
T 3goa_A          101 AARMIMTGDA--QVCLVGGVEHM  121 (387)
T ss_dssp             HHHHHHTTSC--SEEEEEEEECT
T ss_pred             HHHHHhCCCC--CEEEEEEEecC
Confidence            9999999977  99999999954

>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*

Probab=99.62  E-value=9.1e-14  Score=143.99  Aligned_cols=230  Identities=14%  Similarity=0.052  Sum_probs=147.9

Q ss_pred             CCceeEEeEEEEecCCccccHHHHHHhc--CCCcc----ee-EEeecceEEecCC----------------------CCC
Q 013297            1 MAKNVGILAMDIYFPPTCVQQEALEAHD--GASKG----KY-TIGLGQECMAFCS----------------------EVE   51 (446)
Q Consensus         1 ~~~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~~~----k~-~~Glg~r~~av~~----------------------~~E   51 (446)
                      |.+.|.|.++|..+|.- .+.+++.+..  |.+.-    ++ ..++..+.-...+                      .-+
T Consensus        22 m~~~v~ItG~g~~~P~g-~~~~~~w~~l~~g~s~i~~~~~~~~~~~~~~~~g~v~~~~~~~~~~fd~~~~i~~~~~~~~d  100 (451)
T 4ddo_A           22 MTLRVVVTGIGIVSPLG-CGKELVWQRLIGGGSGLRRLGDDIAGELSAKVGGTVQDVAEDPEGGFDPERSVPHKELRKMD  100 (451)
T ss_dssp             --CCEEEEEEEEEETTE-ESHHHHHHHHHTTCCCEEECCHHHHTTSSCCEEECCCCTTTCTTTCCCGGGTSCHHHHTTSC
T ss_pred             CCCCEEEEEeEEECCCC-CCHHHHHHHHHcCCCeeeeCCccccccccCccceEccccccccccccchhhhCCHHHHhhCC
Confidence            34579999999999987 4666665543  32210    00 0000001000000                      112


Q ss_pred             CHHHHHHHHHHHHHHHCCCCcCCc-c----EEEEEeccCC--------------------------CCCccHHHHHHHHh
Q 013297           52 DVISMSLTAVTNLLEKYKIDPKQI-G----RLEVGSETVI--------------------------DKSKSIKTFLMQIF  100 (446)
Q Consensus        52 d~~~lA~~Aa~~aL~~agi~~~dI-d----~li~~T~t~~--------------------------~~~ps~a~~l~~~L  100 (446)
                      ....|+++|++++|+++|+++++| |    .++++|.++.                          ...+..+.+|+..|
T Consensus       101 ~~~~L~l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l  180 (451)
T 4ddo_A          101 RFIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKH  180 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHHHHHHHHh
Confidence            357899999999999999999999 7    6888876431                          12345688999999


Q ss_pred             cccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCc----------------------------cC
Q 013297          101 EKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV----------------------------YA  152 (446)
Q Consensus       101 Gl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~----------------------------y~  152 (446)
                      |+    ..+++++..+|++++.||..|..+|++|.+  +.|||+++|...                            |+
T Consensus       181 gl----~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~--d~vLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd  254 (451)
T 4ddo_A          181 RF----RGPLGCPVTACAASVQAIGDAMRMIRTGEA--DVVLAGGAEAAFDKVSLGGFAAARALSTGFSEEPVRASRPFD  254 (451)
T ss_dssp             TC----CSCEECCCCGGGHHHHHHHHHHHHHHHTSC--SEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGSCCTTB
T ss_pred             cC----CCceeeecCccHHHHHHHHHHHHHHHCCCC--CEEEEeccccccCHHHHHHHHHHhhhccCCCcCccccccccc
Confidence            97    237899999999999999999999999987  999999999852                            00


Q ss_pred             CCCCCccccccceeeeeccCCCc-----cccccccccccc-ccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHH
Q 013297          153 EGPARPTGGAAAVVMLVGPDAPV-----AFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCS  226 (446)
Q Consensus       153 ~~~~~~t~GdGAvA~Ll~~~~~~-----~~~~~~~g~~~~-~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~  226 (446)
                      ...+...+||||+|+||.+.+..     .+...+.|+... +...+..       |..++.        ...++++..++
T Consensus       255 ~~~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~-------~~~~~~--------~~~~ai~~al~  319 (451)
T 4ddo_A          255 RDRDGFVMGEGAAMVVVESLDHALARGARPIAEIIGYGTTADAYHMTA-------GPDDGS--------GAMRAMKLALR  319 (451)
T ss_dssp             TTCCSBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSC-------CCTTCH--------HHHHHHHHHHH
T ss_pred             cCCCCcEEeceEEEEEEeeHHHHHhCCCceEEEEEEEEEecCCCccCC-------CCCCHH--------HHHHHHHHHHH
Confidence            11123568999999999874310     000112333221 1111111       112222        22345566666


Q ss_pred             HhhhhhCCCCCcCCCceeeccCcchHHHHHHH
Q 013297          227 KYEKLEGKQFSLSNADYFVFHSPYNKLVQKSF  258 (446)
Q Consensus       227 ~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~  258 (446)
                      +.      +++++|||++..|..+..+.+...
T Consensus       320 ~A------gl~~~dId~ve~Hgtgt~~~d~~E  345 (451)
T 4ddo_A          320 MG------DVAPEQVDYVNAHATSTPVGDAGE  345 (451)
T ss_dssp             HH------TCCGGGCCEEECCCCSCHHHHHHH
T ss_pred             Hc------CCCHHHcCEEEecCCcCcccCHHH
Confidence            65      899999999999998888766543

>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1

Probab=99.61  E-value=3.2e-14  Score=145.22  Aligned_cols=97  Identities=8%  Similarity=0.132  Sum_probs=89.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCC-CccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHH
Q 013297           49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC  127 (446)
Q Consensus        49 ~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~-~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A  127 (446)
                      .+++..+|+++|++++|+++|+++++||.|++++.++... .+..+.+|+..||+  ..+.++++++++|++++.||..|
T Consensus        22 ~~~~~~~L~~~Aa~~Al~dAgl~~~~id~v~~g~~~~~~~~~~~~a~~va~~lGl--~~~~p~~~v~~aCas~~~Al~~A   99 (401)
T 1ulq_A           22 ASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGF--PVEVAGCTVNRLCGSGLEAVAQA   99 (401)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTC--CTTCEEEEEECGGGHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCChHHHHHHHHhCC--CCCccEeeccccchHHHHHHHHH
Confidence            5789999999999999999999999999999999888765 57889999999997  45789999999999999999999


Q ss_pred             HHHHHcCCCCCCEEEEEEeecC
Q 013297          128 VNWVESSSWDGRYGLVVCTDSA  149 (446)
Q Consensus       128 ~~~l~sg~~~~~~aLVVasD~~  149 (446)
                      ..+|++|.+  +.+||+++|..
T Consensus       100 ~~~I~~G~~--d~vLv~G~e~~  119 (401)
T 1ulq_A          100 ARAIWAGEG--KVYIGSGVESM  119 (401)
T ss_dssp             HHHHHTTSC--SEEEEEEEEES
T ss_pred             HHHHHCCCC--CEEEEEEEeec
Confidence            999999977  99999999964

>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A

Probab=99.61  E-value=2.9e-14  Score=145.39  Aligned_cols=96  Identities=9%  Similarity=0.055  Sum_probs=88.4

Q ss_pred             CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHH
Q 013297           50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN  129 (446)
Q Consensus        50 ~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~  129 (446)
                      +++..+|+++|++++|+++|+++++||.+++++.++....+..+.+|+..||+  ....+++++..+|++++.||..|..
T Consensus        27 ~~~~~~L~~~a~~~Al~dAGl~~~~id~v~~g~~~~~~~~~~~a~~ia~~lgl--~~~~p~~~v~~aCaSg~~Ai~~A~~  104 (397)
T 1wl4_A           27 AVPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGCGQNPVRQASVGAGI--PYSVPAWSCQMICGSGLKAVCLAVQ  104 (397)
T ss_dssp             TSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTC--CTTSCEEEECCGGGHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHHcCC--CCCccEEEecCcChhHHHHHHHHHH
Confidence            67899999999999999999999999999999988866667899999999997  4578899999999999999999999


Q ss_pred             HHHcCCCCCCEEEEEEeecC
Q 013297          130 WVESSSWDGRYGLVVCTDSA  149 (446)
Q Consensus       130 ~l~sg~~~~~~aLVVasD~~  149 (446)
                      +|++|.+  +.+||+++|..
T Consensus       105 ~I~~G~~--d~vlagG~e~~  122 (397)
T 1wl4_A          105 SIGIGDS--SIVVAGGMENM  122 (397)
T ss_dssp             HHHTTSC--SEEEEEEEEES
T ss_pred             HHHCCCC--CEEEEEEEeec
Confidence            9999977  99999999864

>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...

Probab=99.61  E-value=2.7e-14  Score=145.34  Aligned_cols=96  Identities=8%  Similarity=0.051  Sum_probs=87.7

Q ss_pred             CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHH
Q 013297           50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN  129 (446)
Q Consensus        50 ~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~  129 (446)
                      +++..+|+++|++++|+++|+++++||.+++++.++....+..+.+|+..||+  .+..+++++..+|++++.||..|..
T Consensus        24 ~~~~~~L~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~ia~~lgl--~~~~p~~~v~~aCaSgl~Al~~A~~  101 (392)
T 2vu1_A           24 NTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGV--PQEATAWGMNQLCGSGLRAVALGMQ  101 (392)
T ss_dssp             TCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTC--CTTSEEEEEECGGGHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHHcCC--CCCceEEEecccchHHHHHHHHHHH
Confidence            67899999999999999999999999999999988766567899999999998  4447899999999999999999999


Q ss_pred             HHHcCCCCCCEEEEEEeecC
Q 013297          130 WVESSSWDGRYGLVVCTDSA  149 (446)
Q Consensus       130 ~l~sg~~~~~~aLVVasD~~  149 (446)
                      .|++|.+  +.+||+++|..
T Consensus       102 ~I~~G~~--d~vlvgG~e~~  119 (392)
T 2vu1_A          102 QIATGDA--SIIVAGGMESM  119 (392)
T ss_dssp             HHHTTSC--SCEEEEEEEES
T ss_pred             HHHCCCC--CEEEEEEEecc
Confidence            9999977  99999999964

>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A

Probab=99.60  E-value=2.2e-13  Score=140.57  Aligned_cols=227  Identities=14%  Similarity=0.134  Sum_probs=147.0

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhc--CCCc---------cee--E-Eeecce-----EEe---cCC-----CCCCHHH
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHD--GASK---------GKY--T-IGLGQE-----CMA---FCS-----EVEDVIS   55 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~~---------~k~--~-~Glg~r-----~~a---v~~-----~~Ed~~~   55 (446)
                      ++|-|.+|+..+|.- .+.+++.+..  |.+.         ..+  . .|.-..     .+-   +.+     .-.....
T Consensus        21 ~~v~ItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~d~~~~   99 (438)
T 2iwz_A           21 RRVVITGIGLVTPLG-VGTHLVWDRLIGGESGIVSLVGEEYKSIPCSVAAYVPRGSDEGQFNEQNFVSKSDIKSMSSPTI   99 (438)
T ss_dssp             CCEEEEEEEEEETTE-ESHHHHHHHHHTTCCCEEECCSGGGTTSSCCEEECCCBSSSTTSBCGGGTSCHHHHTTSCHHHH
T ss_pred             CCEEEEeeeEECCCC-CCHHHHHHHHHcCCCccccCCchhcccCccceeeeeccccccccCChhhcCCHHHHHhcCHHHH
Confidence            469999999999977 5777765543  3221         001  0 010000     000   000     0123567


Q ss_pred             HHHHHHHHHHHHCCCCc-CCcc----EEEEEeccCCC-----------------C---------CccHHHHHHHHhcccC
Q 013297           56 MSLTAVTNLLEKYKIDP-KQIG----RLEVGSETVID-----------------K---------SKSIKTFLMQIFEKFG  104 (446)
Q Consensus        56 lA~~Aa~~aL~~agi~~-~dId----~li~~T~t~~~-----------------~---------~ps~a~~l~~~LGl~g  104 (446)
                      |+++|++++|+++|+++ ++||    .|+++|.++..                 .         ...++.+|+..||+  
T Consensus       100 l~l~aa~~AL~dAGl~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl--  177 (438)
T 2iwz_A          100 MAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYKL--  177 (438)
T ss_dssp             HHHHHHHHHHHHHTCCCCSHHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHHHHHHHHTC--
T ss_pred             HHHHHHHHHHHHcCCCCcccccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHHHHHHHhCC--
Confidence            99999999999999998 8887    58888876542                 1         12478899999998  


Q ss_pred             CCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecC-cc------------C-----C--------CCCCc
Q 013297          105 NTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-VY------------A-----E--------GPARP  158 (446)
Q Consensus       105 ~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~-~y------------~-----~--------~~~~~  158 (446)
                       .. +++++.++|++++.||..|..+|++|.+  +.|||+++|.. ..            .     +        ..+..
T Consensus       178 -~g-p~~~v~taCsS~l~Al~~A~~~I~~G~~--d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~p~~~~~pfd~~~~G~  253 (438)
T 2iwz_A          178 -KG-PNHAVSTACTTGAHAVGDSFRFIAHGDA--DVMVAGGTDSCISPLSLAGFSRARALSTNSDPKLACRPFHPKRDGF  253 (438)
T ss_dssp             -CS-CEECBCCGGGHHHHHHHHHHHHHHHTSC--SEEEEEEEECCCSHHHHHHHHHTTCBCCCSCTTTSCCTTCTTCCSB
T ss_pred             -CC-ceeeecCchhHHHHHHHHHHHHHHcCCC--CEEEEEeeehhcCHHHHHHHHhcCCcCCCCCCCcccccCCCCCCCE
Confidence             22 7899999999999999999999999987  99999999963 10            0     0        11235


Q ss_pred             cccccceeeeeccCCCc-----cccccccccccc-ccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhh
Q 013297          159 TGGAAAVVMLVGPDAPV-----AFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLE  232 (446)
Q Consensus       159 t~GdGAvA~Ll~~~~~~-----~~~~~~~g~~~~-~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~  232 (446)
                      .+||||+|+||++.+..     .+...+.|+... +...+..|.       .++.        ...++++..+++.    
T Consensus       254 ~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~t~p~-------~~~~--------~~~~ai~~Al~~A----  314 (438)
T 2iwz_A          254 VMGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPD-------PEGE--------GALRCMAAALKDA----  314 (438)
T ss_dssp             CBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCC-------TTCH--------HHHHHHHHHHHHH----
T ss_pred             EeeceEEEEEeccHHHHHhCCCceEEEEecceecCCCCCCCCCC-------CCHH--------HHHHHHHHHHHHc----
Confidence            68999999999864310     000112232221 111122232       1222        2344556666665    


Q ss_pred             CCCCCcCCCceeeccCcchHHHHHH
Q 013297          233 GKQFSLSNADYFVFHSPYNKLVQKS  257 (446)
Q Consensus       233 ~~~~~~~did~~i~H~p~~~~~~~~  257 (446)
                        +++++|||++..|..++.+.+.+
T Consensus       315 --gl~p~dId~ve~HgtgT~~gD~~  337 (438)
T 2iwz_A          315 --GVQPEEISYINAHATSTPLGDAA  337 (438)
T ss_dssp             --TCCGGGCCEEECCCCSCHHHHHH
T ss_pred             --CCCHHHcCEEEecCCCCcccCHH
Confidence              79999999999999999876644

>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A

Probab=99.57  E-value=2.1e-13  Score=140.54  Aligned_cols=178  Identities=13%  Similarity=0.094  Sum_probs=124.2

Q ss_pred             HHHHHHHHHHHHHHHCCC-CcCCcc----EEEEEeccCC-----------------CCC---------ccHHHHHHHHhc
Q 013297           53 VISMSLTAVTNLLEKYKI-DPKQIG----RLEVGSETVI-----------------DKS---------KSIKTFLMQIFE  101 (446)
Q Consensus        53 ~~~lA~~Aa~~aL~~agi-~~~dId----~li~~T~t~~-----------------~~~---------ps~a~~l~~~LG  101 (446)
                      ...|+++|++++|+++|+ ++++||    .|++++.++.                 ...         ..++.+|+..||
T Consensus        88 ~~~l~l~aa~~AL~dAG~~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg  167 (431)
T 2ix4_A           88 FIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYG  167 (431)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHcCCCCccccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchhHHHHHHHHHHHC
Confidence            457999999999999999 988888    5778776542                 111         147889999999


Q ss_pred             ccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCcc-------------C---------------C
Q 013297          102 KFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-------------A---------------E  153 (446)
Q Consensus       102 l~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-------------~---------------~  153 (446)
                      +   . .+++++.++|++++.||..|..+|++|.+  +.+||+++|...-             .               .
T Consensus       168 l---~-gp~~~v~taCsS~l~Al~~A~~~I~~G~~--d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~  241 (431)
T 2ix4_A          168 F---Q-GPNHAAVTACATGAHSIGDATRMIQFGDA--DVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDC  241 (431)
T ss_dssp             C---C-SCEECBCCGGGHHHHHHHHHHHHHHHTSC--SEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGGSCCTTBT
T ss_pred             C---C-CceeCccChhHHHHHHHHHHHHHHHcCCC--CEEEEeeeccccCHHHHHHHHhccccCccccCCcccccccCCC
Confidence            8   2 36899999999999999999999999987  9999999996420             0               1


Q ss_pred             CCCCccccccceeeeeccCCCc-----cccccccccccc-ccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHH
Q 013297          154 GPARPTGGAAAVVMLVGPDAPV-----AFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSK  227 (446)
Q Consensus       154 ~~~~~t~GdGAvA~Ll~~~~~~-----~~~~~~~g~~~~-~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~  227 (446)
                      ..+..++||||+|+||++.+..     .+...+.|+... +...+..|.       .++        .....++++.+++
T Consensus       242 ~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~-------~~~--------~~~~~ai~~al~~  306 (431)
T 2ix4_A          242 DRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPP-------EDG--------KGAVLAMTRALRQ  306 (431)
T ss_dssp             TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCC-------TTC--------HHHHHHHHHHHHH
T ss_pred             CCCCceeecceEEEEEccHHHHHhCCCceEEEEeeeeecCCCCCCCCCC-------CCH--------HHHHHHHHHHHHH
Confidence            1123568999999999875310     000112222211 111122221       122        2234456666666


Q ss_pred             hhhhhCCCCCcCCCceeeccCcchHHHHHH
Q 013297          228 YEKLEGKQFSLSNADYFVFHSPYNKLVQKS  257 (446)
Q Consensus       228 ~~~~~~~~~~~~did~~i~H~p~~~~~~~~  257 (446)
                      .      +++++|||++..|..++.+.+.+
T Consensus       307 a------gl~~~dId~ve~HgtgT~~~D~~  330 (431)
T 2ix4_A          307 S------GLCPNQIDYVNAHATSTPIGDAV  330 (431)
T ss_dssp             H------TCCGGGCCEEECCCCSCHHHHHH
T ss_pred             c------CCCHHHcCEEEEeCCcCcccCHH
Confidence            5      79999999999999888876654

>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*

Probab=99.57  E-value=2.9e-13  Score=137.86  Aligned_cols=97  Identities=9%  Similarity=0.026  Sum_probs=88.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHH
Q 013297           49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV  128 (446)
Q Consensus        49 ~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~  128 (446)
                      .+++..+|+++|++++|+++|+++++||.+++++.++....+..+..|+..||+  ..+.+++++.++|++++.||..|.
T Consensus        28 ~~~~~~~l~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~va~~lgl--~~~~p~~~v~~aCaS~~~Al~~A~  105 (395)
T 2ib8_A           28 SLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGEGQAPTRQAVLGAGL--PISTPCTTINKVCASGMKAIMMAS  105 (395)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTC--CTTCCEEEEECGGGHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCchHHHHHHHHcCC--CCCceEEEecccccHHHHHHHHHH
Confidence            358899999999999999999999999999999988877678889999999997  457889999999999999999999


Q ss_pred             HHHHcCCCCCCEEEEEEeecC
Q 013297          129 NWVESSSWDGRYGLVVCTDSA  149 (446)
Q Consensus       129 ~~l~sg~~~~~~aLVVasD~~  149 (446)
                      .+|++|.+  +.+||+++|..
T Consensus       106 ~~I~~G~~--d~vlvgG~e~~  124 (395)
T 2ib8_A          106 QSLMCGHQ--DVMVAGGMESM  124 (395)
T ss_dssp             HHHHTTSC--SEEEEEEEEEG
T ss_pred             HHHHCCCC--CEEEEEeeecc
Confidence            99999987  99999999953

>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1

Probab=99.57  E-value=1.6e-13  Score=140.71  Aligned_cols=223  Identities=12%  Similarity=0.007  Sum_probs=146.6

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhc--CCCc----cee-EEeecceEEec---------CCCC-----CCHHHHHHHHH
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHD--GASK----GKY-TIGLGQECMAF---------CSEV-----EDVISMSLTAV   61 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~~----~k~-~~Glg~r~~av---------~~~~-----Ed~~~lA~~Aa   61 (446)
                      +.|-|.+++..+|.-. +.+++.+..  |.+.    .++ ..++..+....         .++.     .....|+++|+
T Consensus         9 ~~v~I~G~g~~~p~g~-~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~d~~~~l~l~aa   87 (415)
T 1tqy_B            9 KSVLITGVGVVAPNGL-GLAPYWSAVLDGRHGLGPVTRFDVSRYPATLAGQIDDFHAPDHIPGRLLPQTDPSTRLALTAA   87 (415)
T ss_dssp             -CEEEEEEEEEETTEE-SHHHHHHHHHTTCCCEEECTTTTGGGSSCCEEECCCSCCHHHHSCTTTGGGCCHHHHHHHHHH
T ss_pred             CCEEEEeeEEECCCCC-CHHHHHHHHHcCCCcEEECCcccccCCCcceEEEeCCCCchhcCCHHHHHhcCHHHHHHHHHH
Confidence            5699999999999884 666665432  3221    000 00000010010         1112     23578999999


Q ss_pred             HHHHHHCCCCcCCcc----EEEEEeccCCC--------------------------CCccHHHHHHHHhcccCCCCceee
Q 013297           62 TNLLEKYKIDPKQIG----RLEVGSETVID--------------------------KSKSIKTFLMQIFEKFGNTDIEGV  111 (446)
Q Consensus        62 ~~aL~~agi~~~dId----~li~~T~t~~~--------------------------~~ps~a~~l~~~LGl~g~~~~~~~  111 (446)
                      +++|+++|+++++||    .|+++|.++.+                          ..+..+.+|+..||+.    .+++
T Consensus        88 ~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~----gp~~  163 (415)
T 1tqy_B           88 DWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMR----GPSS  163 (415)
T ss_dssp             HHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTCC----SSCE
T ss_pred             HHHHHHcCCCccccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHHHhCCC----CceE
Confidence            999999999999999    89999876532                          1356789999999982    3688


Q ss_pred             eeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecC-c------------cC-------------CCCCCccccccce
Q 013297          112 DSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-V------------YA-------------EGPARPTGGAAAV  165 (446)
Q Consensus       112 di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~-~------------y~-------------~~~~~~t~GdGAv  165 (446)
                      ++..+|++++.||..|..+|++| +  +.+||+++|.. .            ..             ...+...+||||+
T Consensus       164 ~v~~aCsS~l~Al~~A~~~I~~G-~--d~~LvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~pfd~~~~G~~~geGaa  240 (415)
T 1tqy_B          164 ALVAEQAGGLDALGHARRTIRRG-T--PLVVSGGVDSALDPWGWVSQIASGRISTATDPDRAYLPFDERAAGYVPGEGGA  240 (415)
T ss_dssp             EEECGGGHHHHHHHHHHHHHHHT-C--SEEEEEEEECCCSHHHHHHHHTTSCBCCCSCGGGSCCTTSTTCCCBCBBCEEE
T ss_pred             eecCCccHHHHHHHHHHHHHHcC-C--CEEEEeeecCcCCHHHHHHHHhccCccCCCCCCCCcCCCCCCCCCcceeeeEE
Confidence            99999999999999999999999 9  99999999983 1            00             0112356899999


Q ss_pred             eeeeccCCCc------cccccccccccc-ccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCc
Q 013297          166 VMLVGPDAPV------AFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSL  238 (446)
Q Consensus       166 A~Ll~~~~~~------~~~~~~~g~~~~-~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~  238 (446)
                      |+||++.+..      .+...+.|+... +...+..|.       . +.          .++++..+++.      ++++
T Consensus       241 avvL~~~~~A~~~g~~~i~a~I~g~~~~~dg~~~~~p~-------~-~~----------~~ai~~al~~A------gl~~  296 (415)
T 1tqy_B          241 ILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRP-------A-GL----------ERAIRLALNDA------GTGP  296 (415)
T ss_dssp             EEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCC-------C-SH----------HHHHHHHHHHH------TCCG
T ss_pred             EEEECcHHHHHHCCCCceEEEEEEEEEccCCCCCCCCC-------H-HH----------HHHHHHHHHHc------CCCH
Confidence            9999865310      000112222211 111222332       1 21          23455555665      7999


Q ss_pred             CCCceeeccCcchHHHHHH
Q 013297          239 SNADYFVFHSPYNKLVQKS  257 (446)
Q Consensus       239 ~did~~i~H~p~~~~~~~~  257 (446)
                      +|||++..|..++++.+.+
T Consensus       297 ~dId~ve~Hgtgt~~~D~~  315 (415)
T 1tqy_B          297 EDVDVVFADGAGVPELDAA  315 (415)
T ss_dssp             GGCCEEECCCCCSHHHHHH
T ss_pred             hHCCEEEEeCCCCcCcCHH
Confidence            9999999999998877654

>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}

Probab=99.56  E-value=2.7e-12  Score=132.30  Aligned_cols=226  Identities=11%  Similarity=0.057  Sum_probs=143.8

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhc--CCCc----ceeE---EeecceEEecCCCC-------------CCHHHHHHHH
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHD--GASK----GKYT---IGLGQECMAFCSEV-------------EDVISMSLTA   60 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~~----~k~~---~Glg~r~~av~~~~-------------Ed~~~lA~~A   60 (446)
                      ++|-|.+++..+|.-. +.+++.+..  |.+.    .++.   .++..+.-.+.+++             .....|+++|
T Consensus        28 ~~vaI~G~g~~~p~g~-~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~d~~~~l~l~a  106 (434)
T 2gp6_A           28 PYVVVTGIAMTTALAT-DAETTWKLLLDRQSGIRTLDDPFVEEFDLPVRIGGHLLEEFDHQLTRIELRRMGYLQRMSTVL  106 (434)
T ss_dssp             CCEEEEEEEEECSSCS-SHHHHHHHHHTTCCCEEECCCHHHHHHCCSCCEEECCSCCSTTSSCHHHHHTCCHHHHHHHHH
T ss_pred             CCEEEEeeEEeCCCCC-CHHHHHHHHHcCCCeeeeCCccccccccCccceeEEcCCchhhhCCHHHHHhCCHHHHHHHHH
Confidence            4699999999999885 777665543  3221    0010   01111111111111             1246899999


Q ss_pred             HHHHHHHCCCC---cCCccEEEEEeccCCC-----------------CCc---------cHHHHHHHHhcccCCCCceee
Q 013297           61 VTNLLEKYKID---PKQIGRLEVGSETVID-----------------KSK---------SIKTFLMQIFEKFGNTDIEGV  111 (446)
Q Consensus        61 a~~aL~~agi~---~~dId~li~~T~t~~~-----------------~~p---------s~a~~l~~~LGl~g~~~~~~~  111 (446)
                      ++++|+++|++   +++|+ |+++|.++.+                 ..|         .++.+|+..||+    +.+++
T Consensus       107 a~~ALedAG~~~~~~~~ig-v~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~lgl----~Gp~~  181 (434)
T 2gp6_A          107 SRRLWENAGSPEVDTNRLM-VSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHA----KAGVM  181 (434)
T ss_dssp             HHHHHHHTTCCCCCTTSEE-EEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHHHHHSCC----CSCEE
T ss_pred             HHHHHHhcCCCccCCCceE-EEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHHhhhhcC----CCCeE
Confidence            99999999984   55665 5677776543                 111         468899999997    24789


Q ss_pred             eeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCcc-------------CC-------C--------CCCcccccc
Q 013297          112 DSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-------------AE-------G--------PARPTGGAA  163 (446)
Q Consensus       112 di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-------------~~-------~--------~~~~t~GdG  163 (446)
                      ++.++|++++.||..|..+|++|.+  +.+||+++|...-             ..       +        .+...+|||
T Consensus       182 ~v~~aCsS~l~Al~~A~~~I~~G~~--d~aLvgG~e~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~~g~v~gdG  259 (434)
T 2gp6_A          182 TPVSACASGAEAIARAWQQIVLGEA--DAAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDRDRDGFVFGEG  259 (434)
T ss_dssp             CEECGGGHHHHHHHHHHHHHHHTSC--SEEEEEEECCCCCHHHHHHHHTTTSSCCCCTTCTTTSCCSSBTTCCCCCBBCC
T ss_pred             EeCCCCcHHHHHHHHHHHHHHcCCC--CEEEEeeeccccCHHHHHHHHHHHHHhcCCCCCCCCceecccccCCCcceecc
Confidence            9999999999999999999999987  9999999997421             00       0        112468999


Q ss_pred             ceeeeeccCCCc-----ccccccccccc-cccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCC
Q 013297          164 AVVMLVGPDAPV-----AFESKLRGSHM-SHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFS  237 (446)
Q Consensus       164 AvA~Ll~~~~~~-----~~~~~~~g~~~-~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~  237 (446)
                      |+|+||++.+..     .+...+.|+.. .+...+..|.       .++        ....++++..+++.      +++
T Consensus       260 AaavvL~~~~~A~~~g~~i~a~I~g~~~~~Dg~~~~~p~-------~~~--------~~~~~ai~~al~~A------gl~  318 (434)
T 2gp6_A          260 GALLLIETEEHAKARGANILARIMGASITSDGFHMVAPD-------PNG--------ERAGHAITRAIQLA------GLA  318 (434)
T ss_dssp             EEEEEEEEHHHHHTTTCCCCEEEEEEEEEECCSCSSSCC-------TTC--------HHHHHHHHHHHHHT------TCC
T ss_pred             eEEEEeCcHHHHHHCCCceEEEEEEEEEecCCCCCCCCC-------CCh--------HHHHHHHHHHHHHc------CCC
Confidence            999999864310     00011222221 1111122222       122        23344566666665      899


Q ss_pred             cCCCceeeccCcchHHHHHH
Q 013297          238 LSNADYFVFHSPYNKLVQKS  257 (446)
Q Consensus       238 ~~did~~i~H~p~~~~~~~~  257 (446)
                      ++|||++.+|.....+.+.+
T Consensus       319 ~~dId~ve~Hgtgt~~~D~~  338 (434)
T 2gp6_A          319 PGDIDHVNAHATGTQVGDLA  338 (434)
T ss_dssp             TTTEEEEECCCCSCHHHHHH
T ss_pred             HHHcCEEEEeCCcCccchHH
Confidence            99999999998777765543

>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A

Probab=99.55  E-value=1.8e-13  Score=139.28  Aligned_cols=97  Identities=11%  Similarity=0.110  Sum_probs=89.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHCC----CCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHH
Q 013297           49 EVEDVISMSLTAVTNLLEKYK----IDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAAL  124 (446)
Q Consensus        49 ~~Ed~~~lA~~Aa~~aL~~ag----i~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL  124 (446)
                      .+++..+|+++|++++|+++|    +++++||.|++++.++....+..+.+|+..||+  ..+.++++++.+|++++.||
T Consensus        31 ~~~~~~~La~~Aa~~Al~~Ag~~~~l~~~~id~v~~g~~~~~~~~~~~a~~va~~lGl--~~~~p~~~v~~aCasg~~Al  108 (393)
T 1afw_A           31 KDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAACLASGI--PYSTPFVALNRQCSSGLTAV  108 (393)
T ss_dssp             TTCCHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTC--CTTSCEEEEECGGGHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHhCCCCCCCCHHHCCEEEEEecCCCCCCChHHHHHHHHcCC--CCCceEEEEcCcCHHHHHHH
Confidence            478999999999999999999    999999999999988877667889999999997  45789999999999999999


Q ss_pred             HHHHHHHHcCCCCCCEEEEEEeecC
Q 013297          125 FNCVNWVESSSWDGRYGLVVCTDSA  149 (446)
Q Consensus       125 ~~A~~~l~sg~~~~~~aLVVasD~~  149 (446)
                      ..|..+|++|.+  +.+||+++|..
T Consensus       109 ~~A~~~I~~G~~--d~vLv~G~e~~  131 (393)
T 1afw_A          109 NDIANKIKVGQI--DIGLALGVESM  131 (393)
T ss_dssp             HHHHHHHHTTSC--SEEEEEEEEEH
T ss_pred             HHHHHHHHCCCC--CEEEEEEEEec
Confidence            999999999977  99999999953

>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*

Probab=99.55  E-value=1.8e-13  Score=139.15  Aligned_cols=96  Identities=14%  Similarity=0.126  Sum_probs=87.6

Q ss_pred             CCCHHHHHHHHHHHHHHHC-CCCcCCccEEEEEeccCCCC-CccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHH
Q 013297           50 VEDVISMSLTAVTNLLEKY-KIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC  127 (446)
Q Consensus        50 ~Ed~~~lA~~Aa~~aL~~a-gi~~~dId~li~~T~t~~~~-~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A  127 (446)
                      +++..+|+++|++++|+++ |+++++||.+++++.++... .+..+.+|+..||+  .++.+++++..+|++++.||..|
T Consensus        27 ~~~~~~L~~~a~~~AL~dA~gl~~~~id~v~~g~~~~~~~~~~~~a~~ia~~lgl--~~~~p~~~v~~aCaS~~~Al~~A  104 (390)
T 1wdk_C           27 NTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQI--PHTSAAQTVSRLCGSSMSALHTA  104 (390)
T ss_dssp             TCCHHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSS--CTTSEEEEEECGGGHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeeccccCCCCcHHHHHHHHcCC--CCCccEEEEcccchhHHHHHHHH
Confidence            6789999999999999999 99999999999999887654 36789999999998  56788999999999999999999


Q ss_pred             HHHHHcCCCCCCEEEEEEeecC
Q 013297          128 VNWVESSSWDGRYGLVVCTDSA  149 (446)
Q Consensus       128 ~~~l~sg~~~~~~aLVVasD~~  149 (446)
                      ..+|++|.+  +.+||+++|..
T Consensus       105 ~~~I~~G~~--d~vlvgG~e~~  124 (390)
T 1wdk_C          105 AQAIMTGNG--DVFVVGGVEHM  124 (390)
T ss_dssp             HHHHHTTSC--SEEEEEEEEET
T ss_pred             HHHHHcCCC--CEEEEeeeecc
Confidence            999999977  99999999964

>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A

Probab=99.55  E-value=1.6e-13  Score=141.64  Aligned_cols=97  Identities=13%  Similarity=0.158  Sum_probs=87.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCC-CccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHH
Q 013297           49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC  127 (446)
Q Consensus        49 ~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~-~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A  127 (446)
                      .+++..+|+++|++++|+++|+++++||.|++++.+++.. .+..+.+|+..||+  ....++++++.+|++++.||..|
T Consensus        51 ~~~~~~~La~~Aa~~AL~dAGl~~~~Id~vi~g~~~~~~~~~~~~a~~va~~lGl--~~~~p~~~v~~aCaSg~~Al~~A  128 (442)
T 2wu9_A           51 KDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGF--PETVAVRTVNRQCSSGLQAVADV  128 (442)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECCSSBHHHHHHHHHHHHHHTTC--CTTSCEEEEECGGGHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCccCCCChHHHHHHHHcCC--CCCceEEEeCCcCHHHHHHHHHH
Confidence            4789999999999999999999999999999998877542 35678899999997  45789999999999999999999


Q ss_pred             HHHHHcCCCCCCEEEEEEeecC
Q 013297          128 VNWVESSSWDGRYGLVVCTDSA  149 (446)
Q Consensus       128 ~~~l~sg~~~~~~aLVVasD~~  149 (446)
                      ..+|++|.+  +.+||+++|..
T Consensus       129 ~~~I~sG~~--d~vLvgG~e~~  148 (442)
T 2wu9_A          129 AAAIKAGFY--DIGIGAGLESM  148 (442)
T ss_dssp             HHHHHTTSC--SEEEEEEEEET
T ss_pred             HHHHHCCCC--CEEEEEEEeec
Confidence            999999977  99999999964

>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*

Probab=99.55  E-value=1.2e-12  Score=134.63  Aligned_cols=224  Identities=13%  Similarity=0.124  Sum_probs=145.1

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhc--CCCcc-ee----EEeecceEEe---c-----CC-----CCCCHHHHHHHHHH
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHD--GASKG-KY----TIGLGQECMA---F-----CS-----EVEDVISMSLTAVT   62 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~~~-k~----~~Glg~r~~a---v-----~~-----~~Ed~~~lA~~Aa~   62 (446)
                      ++|.|.+++..+|.- .+.+++.+..  |.+.- .+    ..++..+.-.   +     .+     .-.....|++.|++
T Consensus        23 ~~V~ItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~~~fd~~~~i~~~~~~~~d~~~~l~~~aa~  101 (428)
T 3mqd_A           23 RRVVVTGMGIVSSIG-SNTEEVTASLREAKSGISRAEEYAELGFRCQVHGAPDIDIESLVDRRAMRFHGRGTAWNHIAMD  101 (428)
T ss_dssp             CCEEEEEEEEEBTTB-SSHHHHHHHHHHTCCCEEECHHHHHTTCSCCEEECCCCCHHHHSCTGGGTTCCHHHHHHHHHHH
T ss_pred             CCEEEEeeEEECCCc-CCHHHHHHHHHcCCCcceeCCcccccCCCcccccccCCChhhcCCHHHHhhCCHHHHHHHHHHH
Confidence            469999999999987 5676665543  33210 00    0011111100   0     01     12346789999999


Q ss_pred             HHHHHCCCCcCCcc----EEEEEeccCCCC--------------------------CccHHHHHHHHhcccCCCCceeee
Q 013297           63 NLLEKYKIDPKQIG----RLEVGSETVIDK--------------------------SKSIKTFLMQIFEKFGNTDIEGVD  112 (446)
Q Consensus        63 ~aL~~agi~~~dId----~li~~T~t~~~~--------------------------~ps~a~~l~~~LGl~g~~~~~~~d  112 (446)
                      ++|+++|+++++||    .++++|.++.+.                          .+.++.+|...||+    ..+++.
T Consensus       102 ~Al~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl----~gp~~t  177 (428)
T 3mqd_A          102 QAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKI----KGINYS  177 (428)
T ss_dssp             HHHHHHTCCHHHHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHHTTC----CSCEEC
T ss_pred             HHHHHcCCChhHccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHHcCC----CCceee
Confidence            99999999999998    688888765422                          23578899999997    247899


Q ss_pred             eCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCcc---------------------------CCCCCCccccccce
Q 013297          113 STNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY---------------------------AEGPARPTGGAAAV  165 (446)
Q Consensus       113 i~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y---------------------------~~~~~~~t~GdGAv  165 (446)
                      +..+|++++.||..|..+|++|.+  +.+||+++|....                           +...+..++||||+
T Consensus       178 v~~aCsSgl~Ai~~A~~~I~~G~~--d~alvgG~e~~s~~~~~~~~~~~~ls~~~~~~p~~~~rpfd~~~~G~v~gEGAa  255 (428)
T 3mqd_A          178 ISSACATSNHCIGNAYEMIQYGKQ--DRMFAGGCEDLDWTLSVLFDAMGAMSSKYNDTPSTASRAYDKNRDGFVIAGGAG  255 (428)
T ss_dssp             CCCGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEECCCHHHHHHHHHTTCBCCTTTTSGGGSCCTTBTTCCSBCBBCEEE
T ss_pred             ecCccHHHHHHHHHHHHHHHcCCC--CEEEEEeecccchHHHHHHHHhhhhcccccCCcccccCcccCCCCCcccccceE
Confidence            999999999999999999999987  9999999997520                           11112356899999


Q ss_pred             eeeeccCCC-----ccccccccccccc-ccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcC
Q 013297          166 VMLVGPDAP-----VAFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLS  239 (446)
Q Consensus       166 A~Ll~~~~~-----~~~~~~~~g~~~~-~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~  239 (446)
                      |+||.+.+.     ..+...+.|+... +...+..|         ++.        ....+++..++        +++ +
T Consensus       256 avvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~P---------~~~--------~~~~ai~~Al~--------gl~-~  309 (428)
T 3mqd_A          256 VLVLEDLETALARGAKIYGEIVGYGATSDGYDMVAP---------SGE--------GAIRCMKMALS--------TVT-S  309 (428)
T ss_dssp             EEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSC---------CSH--------HHHHHHHHHHT--------TCC-S
T ss_pred             EEEEccHHHHHhCCCcEEEEEEEEEEcCCCCCCCCC---------CHH--------HHHHHHHHHHh--------CCc-c
Confidence            999997531     0111112333221 11222222         221        11223332222        478 9


Q ss_pred             CCceeeccCcchHHHHHHHH
Q 013297          240 NADYFVFHSPYNKLVQKSFA  259 (446)
Q Consensus       240 did~~i~H~p~~~~~~~~~~  259 (446)
                      |||++..|-.++.+.+.+..
T Consensus       310 dId~ve~HgtgT~~~D~~E~  329 (428)
T 3mqd_A          310 KIDYINPHATSTPAGDAPEI  329 (428)
T ss_dssp             CCCEEECCCCSCHHHHHHHH
T ss_pred             ccCEEEEeCCCCCCcCHHHH
Confidence            99999999999988776543

>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*

Probab=99.53  E-value=2e-12  Score=132.56  Aligned_cols=227  Identities=15%  Similarity=0.087  Sum_probs=145.2

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhc--CCCc----ceeE---EeecceEEecCCCC-------------CCHHHHHHHH
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHD--GASK----GKYT---IGLGQECMAFCSEV-------------EDVISMSLTA   60 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~~----~k~~---~Glg~r~~av~~~~-------------Ed~~~lA~~A   60 (446)
                      ++|-|.+++..+|.- .+.+++.+..  |.+.    .++.   .++..+.-.+.+++             .....|+++|
T Consensus        12 ~~vaI~G~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~d~~~~l~l~a   90 (416)
T 2wge_A           12 PSVVVTAVTATTSIS-PDIESTWKGLLAGESGIHALEDEFVTKWDLAVKIGGHLKDPVDSHMGRLDMRRMSYVQRMGKLL   90 (416)
T ss_dssp             CCEEEEEEEEEESSC-SSHHHHHHHHHTTCCCCEECCCHHHHHHTCSCCEEBCCSSCGGGGCCHHHHHHSCHHHHHHHHH
T ss_pred             CcEEEEeeEEECCCC-CCHHHHHHHHHcCCCEEEeCCccccccccCCccEEEEeCCchhhhCCHHHHHhcCHHHHHHHHH
Confidence            469999999999988 5777665543  3221    0010   01111111111110             1245799999


Q ss_pred             HHHHHHHCCCC---cCCccEEEEEeccCCCC-----------------Cc---------cHHHHHHHHhcccCCCCceee
Q 013297           61 VTNLLEKYKID---PKQIGRLEVGSETVIDK-----------------SK---------SIKTFLMQIFEKFGNTDIEGV  111 (446)
Q Consensus        61 a~~aL~~agi~---~~dId~li~~T~t~~~~-----------------~p---------s~a~~l~~~LGl~g~~~~~~~  111 (446)
                      ++++|+++|++   +++|+ |+++|.++.+.                 .|         ..+.+|+..||+    +.+++
T Consensus        91 a~~AL~dAG~~~~~~~~~g-v~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl----~gp~~  165 (416)
T 2wge_A           91 GGQLWESAGSPEVDPDRFA-VVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGA----RAGVM  165 (416)
T ss_dssp             HHHHHHHTTCCCCCGGGEE-EEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC----CSCEE
T ss_pred             HHHHHHHcCCCccCCCceE-EEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHHHHHHHhcc----CCCcc
Confidence            99999999982   33343 77888766431                 22         468899999997    24789


Q ss_pred             eeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCcc-------------C------C--------CCCCccccccc
Q 013297          112 DSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-------------A------E--------GPARPTGGAAA  164 (446)
Q Consensus       112 di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-------------~------~--------~~~~~t~GdGA  164 (446)
                      ++..||++++.||..|..+|++|.+  +.+||+++|....             .      +        ..+...+||||
T Consensus       166 ~v~~aCsS~l~Al~~A~~~I~~G~~--d~~LvgG~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~pfd~~~dg~v~geGa  243 (416)
T 2wge_A          166 TPVSACSSGSEAIAHAWRQIVMGDA--DVAVCGGVEGPIEALPIAAFSMMRAMSTRNDEPERASRPFDKDRDGFVFGEAG  243 (416)
T ss_dssp             CCCCGGGHHHHHHHHHHHHHHTTSC--SEEEEEECCCCCCHHHHHHHHTTTCBCCCTTSGGGSCCTTBTTCCCBCBBCEE
T ss_pred             cccCchHHHHHHHHHHHHHHHcCCC--CEEEEeeecCccchHHHHHHHhcchhhccccCCcccccccccCCCCccccCce
Confidence            9999999999999999999999977  9999999997521             0      0        11235689999


Q ss_pred             eeeeeccCCCc-----ccccccccccc-cccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCc
Q 013297          165 VVMLVGPDAPV-----AFESKLRGSHM-SHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSL  238 (446)
Q Consensus       165 vA~Ll~~~~~~-----~~~~~~~g~~~-~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~  238 (446)
                      +|+||++.+..     .+...+.|+.. .+...+..|.       .++.        ....+++..+++.      ++++
T Consensus       244 aavvL~~~~~A~~~g~~~~a~i~g~~~~~dg~~~~~p~-------~~~~--------~~~~ai~~al~~a------gl~~  302 (416)
T 2wge_A          244 ALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPA-------ADGV--------RAGRAMTRSLELA------GLSP  302 (416)
T ss_dssp             EEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSSCC-------TTCH--------HHHHHHHHHHHHH------TCCG
T ss_pred             EEEEECcHHHHHHCCCceEEEEEEEEEecCCCCccCCC-------CChH--------HHHHHHHHHHHHc------CCCH
Confidence            99999865310     00011222221 1111122221       1222        2344566666665      7999


Q ss_pred             CCCceeeccCcchHHHHHHH
Q 013297          239 SNADYFVFHSPYNKLVQKSF  258 (446)
Q Consensus       239 ~did~~i~H~p~~~~~~~~~  258 (446)
                      +|||++.+|..++.+.+.+.
T Consensus       303 ~dId~ve~HgtgT~~gD~~E  322 (416)
T 2wge_A          303 ADIDHVNAHGTATPIGDAAE  322 (416)
T ss_dssp             GGCCEEECCCCCCHHHHHHH
T ss_pred             HHCCEEEECCCCCcCCCHHH
Confidence            99999999999888776553

>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ...

Probab=99.51  E-value=1.5e-12  Score=133.10  Aligned_cols=222  Identities=13%  Similarity=0.113  Sum_probs=142.7

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhc--CCCcc-e---e-EEeecceEEe---cCCC---------C-CCHHHHHHHHHH
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHD--GASKG-K---Y-TIGLGQECMA---FCSE---------V-EDVISMSLTAVT   62 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~~~-k---~-~~Glg~r~~a---v~~~---------~-Ed~~~lA~~Aa~   62 (446)
                      ++|-|.+++..+|.- .+.+++.+..  |.+.- .   + ..++..+...   +...         . .....|+++|++
T Consensus         2 ~~v~ItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~fd~~~~~~~~~~~~~d~~~~l~l~aa~   80 (406)
T 2vba_A            2 KRAVITGLGIVSSIG-NNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVKLDTTGLIDRKVVRFMSDASIYAFLSME   80 (406)
T ss_dssp             CCEEEEEEEEEBTTB-SSHHHHHHHHHHTCCCEEECHHHHHTTCSCCEEECCCCCCTTSSCHHHHTTCCHHHHHHHHHHH
T ss_pred             CCEEEEeeEEECCCC-CCHHHHHHHHHcCCCeEEeCCcccccCCccceEEEecCChhhcCCHHHHHhcCHHHHHHHHHHH
Confidence            579999999999987 5777665542  33210 0   0 0011111101   1110         1 125789999999


Q ss_pred             HHHHHCCCCcCCccE-----EEEEeccCCC-------------C--------------CccHHHHHHHHhcccCCCCcee
Q 013297           63 NLLEKYKIDPKQIGR-----LEVGSETVID-------------K--------------SKSIKTFLMQIFEKFGNTDIEG  110 (446)
Q Consensus        63 ~aL~~agi~~~dId~-----li~~T~t~~~-------------~--------------~ps~a~~l~~~LGl~g~~~~~~  110 (446)
                      ++|+++|+++++||.     |+++|.++..             .              ...++.+|...||+    ..++
T Consensus        81 ~Al~dAg~~~~~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl----~Gp~  156 (406)
T 2vba_A           81 QAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKI----HGVN  156 (406)
T ss_dssp             HHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTTTC----CSCE
T ss_pred             HHHHHCCCChhHcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHHHHHhccC----CCce
Confidence            999999999988886     8888876542             1              12467889999997    2378


Q ss_pred             eeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCc-c-----------C---------------CCCCCcccccc
Q 013297          111 VDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-Y-----------A---------------EGPARPTGGAA  163 (446)
Q Consensus       111 ~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-y-----------~---------------~~~~~~t~GdG  163 (446)
                      +.+.++|++++.||..|..+|++|.+  +.+||+++|... .           .               ...+...+|||
T Consensus       157 ~~v~taCsS~l~Al~~A~~~I~~G~~--d~alvgG~e~~~~~~~~~~~~~~~ls~~~~~~p~~~~~pfd~~~~G~v~gEG  234 (406)
T 2vba_A          157 YSISSACATSAHCIGNAVEQIQLGKQ--DIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGG  234 (406)
T ss_dssp             EEEECGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEECCCHHHHHHHHHTTCBCCSCTTSGGGSCCTTBTTCCSBCBBCE
T ss_pred             eeeccchhHHHHHHHHHHHHHHcCCC--CEEEEeeeccccChHHHHHhhccccccccCCCCccccCcCcCCCCceEeece
Confidence            99999999999999999999999987  999999999752 1           0               01123568999


Q ss_pred             ceeeeeccCCCc-----cccccccccccc-ccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCC
Q 013297          164 AVVMLVGPDAPV-----AFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFS  237 (446)
Q Consensus       164 AvA~Ll~~~~~~-----~~~~~~~g~~~~-~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~  237 (446)
                      |+|+||++.+..     .+...+.|+... +...+..|         ++.        ....+++..+++.      +  
T Consensus       235 aaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~t~p---------~~~--------~~~~ai~~al~~a------g--  289 (406)
T 2vba_A          235 GGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAP---------SGE--------GAVRCMKMAMHGV------D--  289 (406)
T ss_dssp             EEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCTTSC---------CSH--------HHHHHHHHHHTTC------C--
T ss_pred             EEEEEeCcHHHHHHCCCeEEEEEEEEEEcCCCCCCCCC---------CHH--------HHHHHHHHHHhhC------C--
Confidence            999999875310     010112332221 11112222         121        2233444444443      5  


Q ss_pred             cCCCceeeccCcchHHHHHH
Q 013297          238 LSNADYFVFHSPYNKLVQKS  257 (446)
Q Consensus       238 ~~did~~i~H~p~~~~~~~~  257 (446)
                       +||||+..|..++.+.+.+
T Consensus       290 -~dId~ve~HgtgT~~gD~~  308 (406)
T 2vba_A          290 -TPIDYLNSHGTSTPVGDVK  308 (406)
T ss_dssp             -SCCCEEECCCCSCHHHHHH
T ss_pred             -CCccEEEeeCccCcccCHH
Confidence             8999999999999876654

>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}

Probab=99.45  E-value=2e-11  Score=136.41  Aligned_cols=230  Identities=15%  Similarity=0.094  Sum_probs=147.9

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhc--CCC------cce-eEEeecceEEecCC-------------CC-----CCHHH
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHD--GAS------KGK-YTIGLGQECMAFCS-------------EV-----EDVIS   55 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~------~~k-~~~Glg~r~~av~~-------------~~-----Ed~~~   55 (446)
                      +.|-|.||+..+|...-+.+++.+..  |.+      .++ +......+.-.+.+             +.     .....
T Consensus        39 ~~iaIvG~~~~~Pgg~~~~~~~w~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~l~~~~~fD~~~f~i~~~ea~~mdp~~r  118 (917)
T 2hg4_A           39 EPIAIVGMACRFPGDVDSPESFWEFVSGGGDAIAEAPADRGWEPDPDARLGGMLAAAGDFDAGFFGISPREALAMDPQQR  118 (917)
T ss_dssp             CCEEEEEEEEEBTTTBCSHHHHHHHHHTTCCCCEECCGGGCCCCCSSCCEEBCCTTTTEECTGGGTCCHHHHHHSCHHHH
T ss_pred             CCEEEEeceEECCCCCCCHHHHHHHHHcCCCccccCCcccccCCCCCcceeeEecCccccChhhcCCCHHHHHhcCHHHH
Confidence            46999999999997655566654432  221      111 10000011111111             11     12467


Q ss_pred             HHHHHHHHHHHHCCCCcCCccE----EEEEeccCCCCC-------------------ccHHHHHHHHhcccCCCCceeee
Q 013297           56 MSLTAVTNLLEKYKIDPKQIGR----LEVGSETVIDKS-------------------KSIKTFLMQIFEKFGNTDIEGVD  112 (446)
Q Consensus        56 lA~~Aa~~aL~~agi~~~dId~----li~~T~t~~~~~-------------------ps~a~~l~~~LGl~g~~~~~~~d  112 (446)
                      |+.+|+.++|+++|+++++||.    |++++.++++..                   ..++.+|...||+.    .+++.
T Consensus       119 l~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~----Gps~t  194 (917)
T 2hg4_A          119 IMLEISWEALERAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYCLGLE----GPAMT  194 (917)
T ss_dssp             HHHHHHHHHHHHTTCCGGGGTTSCEEEEEEECCCCCSCCTTSSCGGGGGGHHHHHCHHHHHHHHHHHHTCC----SCEEE
T ss_pred             HHHHHHHHHHHHcCCChHHcCCcceEEEEEeCCchhhhhhhcCccccCcccccccccchHHHHHHHhcCCC----CCeEe
Confidence            9999999999999999999985    788887765431                   13577899999982    26789


Q ss_pred             eCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCcc-------C-------CC--------CCCccccccceeeeec
Q 013297          113 STNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-------A-------EG--------PARPTGGAAAVVMLVG  170 (446)
Q Consensus       113 i~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-------~-------~~--------~~~~t~GdGAvA~Ll~  170 (446)
                      +..||++++.||..|...|++|.+  +.+||+++|....       .       ++        .+...+||||+|+||.
T Consensus       195 v~taCsSsl~Al~~A~~~I~~G~~--d~aLvgGv~~~~~p~~~~~~~~~~~ls~~g~~~pFd~~adG~~~gEGagavVL~  272 (917)
T 2hg4_A          195 VDTACSSGLTALHLAMESLRRDEC--GLALAGGVTVMSSPGAFTEFRSQGGLAADGRCKPFSKAADGFGLAEGAGVLVLQ  272 (917)
T ss_dssp             EECGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEECCCSTHHHHHHTTSSCBCTTSCCCTTBTTCCCBCBBCEEEEEEEE
T ss_pred             ecCCcHHHHHHHHHHHHHHHcCCC--CEEEEeEeccccChhhhHhhhhccCcCCccccCcccccccCCCCcceEEEEEEe
Confidence            999999999999999999999987  9999999998521       1       11        1235689999999998


Q ss_pred             cCCCc-----ccccccccccccccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCCceee
Q 013297          171 PDAPV-----AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFV  245 (446)
Q Consensus       171 ~~~~~-----~~~~~~~g~~~~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~did~~i  245 (446)
                      +.+..     .+...+.|+...+  |-...  +...|  +        ......+++..+++.      +++++|||++.
T Consensus       273 ~l~~A~~~g~~i~a~I~G~~~~~--dg~~~--~~~~P--~--------~~~q~~ai~~Al~~A------gl~p~dId~ve  332 (917)
T 2hg4_A          273 RLSAARREGRPVLAVLRGSAVNQ--DGASN--GLTAP--S--------GPAQQRVIRRALENA------GVRAGDVDYVE  332 (917)
T ss_dssp             EHHHHHHTTCCCCEEEEEEEEEE--CCSCS--SSSCC--C--------HHHHHHHHHHHHHHH------TCCGGGCCEEE
T ss_pred             eHHHHHhCCCCeEEEEEEEEEec--CCCcc--CCCCC--C--------HHHHHHHHHHHHHHc------CCCHHHCCEEe
Confidence            74210     0111123332211  11111  01112  1        123344556666665      89999999999


Q ss_pred             ccCcchHHHHHHH
Q 013297          246 FHSPYNKLVQKSF  258 (446)
Q Consensus       246 ~H~p~~~~~~~~~  258 (446)
                      .|..++.+.+.+.
T Consensus       333 aHgtgT~~gD~~E  345 (917)
T 2hg4_A          333 AHGTGTRLGDPIE  345 (917)
T ss_dssp             CCCCCCTTHHHHH
T ss_pred             eccCCCccCcHHH
Confidence            9999998776643

>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}

Probab=99.44  E-value=5.3e-12  Score=141.00  Aligned_cols=180  Identities=14%  Similarity=0.070  Sum_probs=126.7

Q ss_pred             HHHHHHHHHHHHHHHCCCCcCCccE----EEEEeccCCCCC-------------c-----cHHHHHHHHhcccCCCCcee
Q 013297           53 VISMSLTAVTNLLEKYKIDPKQIGR----LEVGSETVIDKS-------------K-----SIKTFLMQIFEKFGNTDIEG  110 (446)
Q Consensus        53 ~~~lA~~Aa~~aL~~agi~~~dId~----li~~T~t~~~~~-------------p-----s~a~~l~~~LGl~g~~~~~~  110 (446)
                      ...|+.+|+.++|+++|+++++||.    |++++.++++..             +     .++.+|...||+.    .++
T Consensus        95 ~~rL~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~----Gps  170 (915)
T 2qo3_A           95 QQRLLLETSWELVENAGIDPHSLRGTATGVFLGVAKFGYGEDTAAAEDVEGYSVTGVAPAVASGRISYTMGLE----GPS  170 (915)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGGTTBCCEEEEECCCCCTTTTCC---CTTCHHHHTTCHHHHHHHHHHHHTBC----SCE
T ss_pred             HHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEecCchHHhhhcccccccccccccccccHHHHHHHHHhCCC----CCE
Confidence            4689999999999999999999994    888888766531             1     4678999999982    278


Q ss_pred             eeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCcc----------------------CCCCCCccccccceeee
Q 013297          111 VDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY----------------------AEGPARPTGGAAAVVML  168 (446)
Q Consensus       111 ~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y----------------------~~~~~~~t~GdGAvA~L  168 (446)
                      +++..||+|++.||..|..+|++|.+  +.+||+++|....                      +...+...+||||+|+|
T Consensus       171 ~tv~taCsSsl~Al~~A~~~I~~G~~--d~aLvgGve~~~~p~~~~~~~~~~~ls~~g~~~~Fd~~adG~v~gEGagavV  248 (915)
T 2qo3_A          171 ISVDTACSSSLVALHLAVESLRKGES--SMAVVGGAAVMATPGVFVDFSRQRALAADGRSKAFGAGADGFGFSEGVTLVL  248 (915)
T ss_dssp             EEEECGGGHHHHHHHHHHHHHHTTSC--SSEEEEEEECCSSTHHHHHHHTTTCBCSSCCCCTTBTTCCCBCBBCEEEEEE
T ss_pred             EEECCCCHHHHHHHHHHHHHHHcCCC--CEEEEeEehhhcCHHHHHHHhhhcccCCCCCcccccCCCCceeecCceEEEE
Confidence            89999999999999999999999987  9999999997521                      11122356899999999


Q ss_pred             eccCCCc-----ccccccccccccccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCCce
Q 013297          169 VGPDAPV-----AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADY  243 (446)
Q Consensus       169 l~~~~~~-----~~~~~~~g~~~~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~did~  243 (446)
                      |.+.+..     .+...+.|+...+  |-...  +...|  ++        ....++++..+++.      +++++|||+
T Consensus       249 L~~~~~A~~~g~~i~a~I~G~~~~~--dg~~~--~~~~p--~~--------~~~~~~i~~Al~~A------gl~p~dId~  308 (915)
T 2qo3_A          249 LERLSEARRNGHEVLAVVRGSALNQ--DGASN--GLSAP--SG--------PAQRRVIRQALESC------GLEPGDVDA  308 (915)
T ss_dssp             EEEHHHHHHTTCCCCEEEEEEEEEE--CCSCS--STTCC--CH--------HHHHHHHHHHHHHT------TCCGGGCCE
T ss_pred             EeEhHHhhhCCCCeEEEEEEEEEec--CCCcc--CCCCC--CH--------HHHHHHHHHHHHHc------CCCHHHCcE
Confidence            9864310     0101123332211  11111  01112  11        23345566666665      899999999


Q ss_pred             eeccCcchHHHHHHH
Q 013297          244 FVFHSPYNKLVQKSF  258 (446)
Q Consensus       244 ~i~H~p~~~~~~~~~  258 (446)
                      +..|..++.+.+.+.
T Consensus       309 ve~HgtgT~~gD~~E  323 (915)
T 2qo3_A          309 VEAHGTGTALGDPIE  323 (915)
T ss_dssp             EECCCCCCTTTHHHH
T ss_pred             EEecCCCCccCCHHH
Confidence            999998887766543

>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A

Probab=99.33  E-value=4.1e-11  Score=134.43  Aligned_cols=230  Identities=15%  Similarity=0.166  Sum_probs=149.4

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhc--CCC-----cceeEEe---ecceEEe------cCCC----------CCC-HHH
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHD--GAS-----KGKYTIG---LGQECMA------FCSE----------VED-VIS   55 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~-----~~k~~~G---lg~r~~a------v~~~----------~Ed-~~~   55 (446)
                      ..|-|.||+..+|.- .+.+++.+..  |.+     +.++..+   ...+.-.      |...          .-| ...
T Consensus         4 ~~IaIvGmg~r~P~~-~~~~~~W~~l~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~i~~~ea~~mDp~~r   82 (965)
T 3hhd_A            4 EEVVIAGMSGKLPES-ENLQEFWDNLIGGVDMVTDDDRRWKAGLYGLPRRSGKLKDLSRFDASFFGVHPKQAHTMDPQLR   82 (965)
T ss_dssp             CCEEEEEEEEEBTTB-SSHHHHHHHHHTTCCCEECSSSSSCTTGGGCCSCEECCSCSSCCCTTTTTCCHHHHHTSCHHHH
T ss_pred             CCEEEEeeeEECCCC-CCHHHHHHHHHcCCCcccCCCcccccccccCcccccccCChhhcChhhcCCCHHHHhhcCHHHH
Confidence            579999999999986 6777765543  322     1111000   0000000      1000          112 356


Q ss_pred             HHHHHHHHHHHHCCCCcCCcc----EEEEEeccCCC-------------------CCccHHHHHHHHhcccCCCCceeee
Q 013297           56 MSLTAVTNLLEKYKIDPKQIG----RLEVGSETVID-------------------KSKSIKTFLMQIFEKFGNTDIEGVD  112 (446)
Q Consensus        56 lA~~Aa~~aL~~agi~~~dId----~li~~T~t~~~-------------------~~ps~a~~l~~~LGl~g~~~~~~~d  112 (446)
                      |+.+|+.++|+++|+++++||    .+++++.++++                   ..+.++..|...||+.    .+++.
T Consensus        83 L~leaa~eALedAGi~~~~i~~~~~Gv~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~----GPs~t  158 (965)
T 3hhd_A           83 LLLEVTYEAIVDGGINPDSLRGTHTGVWVGVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFDFR----GPSIA  158 (965)
T ss_dssp             HHHHHHHHHHHHTTCCGGGGTTSCCEEEEEECCCHHHHHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHTCC----SCEEE
T ss_pred             HHHHHHHHHHHHcCCChHHcCCceeEEEEeccchhHHHHHhcCccccCcccccccccchHHHHHHHHhCCC----CCeee
Confidence            999999999999999999999    78888776543                   1235788999999982    37899


Q ss_pred             eCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCcc--------------CCC--------CCCccccccceeeeec
Q 013297          113 STNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY--------------AEG--------PARPTGGAAAVVMLVG  170 (446)
Q Consensus       113 i~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y--------------~~~--------~~~~t~GdGAvA~Ll~  170 (446)
                      +..||++++.||..|...|++|.+  +.+||.++|...-              .++        .+...+||||+|+||.
T Consensus       159 vdtACSSsl~Al~~A~~~I~~G~~--d~aLagGv~~~~~p~~~~~~~~~~~ls~~g~~~~Fd~~adG~~~gEGagavvL~  236 (965)
T 3hhd_A          159 LDTACSSSLMALQNAYQAIHSGQC--PAAIVGGINVLLKPNTSVQFLRLGMLSPEGTCKAFDTAGNGYCRSEGVVAVLLT  236 (965)
T ss_dssp             EECGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEECCCCHHHHHHHHHHTCBCTTCCCCTTBTTCCSBCBBCEEEEEEEE
T ss_pred             ecCchHHHHHHHHHHHHHHHcCCC--CEEEEeeeccccCHHHHHHHHhccCcCCCCccccchhccCCccccceEEEEEEe
Confidence            999999999999999999999987  9999999997520              011        1235689999999999


Q ss_pred             cCCCc-ccccccccccccccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCCceeeccCc
Q 013297          171 PDAPV-AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSP  249 (446)
Q Consensus       171 ~~~~~-~~~~~~~g~~~~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p  249 (446)
                      +.... .+...+.|+...+  |-.+.. +...|  ++        ....+++++.+++.      |++++||||+-.|-.
T Consensus       237 ~l~~A~~i~a~I~g~~~n~--dg~~~~-~~t~P--~~--------~~q~~~i~~Al~~A------gl~p~dIdyvEaHgT  297 (965)
T 3hhd_A          237 KKSLARRVYATILNAGTNT--DGFKEQ-GVTFP--SG--------DIQEQLIRSLYQSA------GVAPESFEYIEAHGT  297 (965)
T ss_dssp             EGGGCSSCSEEEEEEEEEE--CCCCTT-CTTSC--CH--------HHHHHHHHHHHHHT------TCCGGGEEEEECCCC
T ss_pred             cHHHcCcccEEEEeeeccC--CCCCCC-CCcCC--CH--------HHHHHHHHHHHHHh------CCCHHHhccccccCC
Confidence            76431 1111233333211  111111 11112  11        12234555555665      899999999999988


Q ss_pred             chHHHHHHH
Q 013297          250 YNKLVQKSF  258 (446)
Q Consensus       250 ~~~~~~~~~  258 (446)
                      ++.+.+.+-
T Consensus       298 gT~~gD~~E  306 (965)
T 3hhd_A          298 GTKVGDPQE  306 (965)
T ss_dssp             CCTTHHHHH
T ss_pred             CCCCCCHHH
Confidence            887666543

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.07  E-value=3.2e-09  Score=129.62  Aligned_cols=298  Identities=9%  Similarity=0.020  Sum_probs=174.5

Q ss_pred             HHHHHHHHHHHHHHHCCCCcCCcc--------EEEEEeccCCC------------------------CCccHHHHHHH-H
Q 013297           53 VISMSLTAVTNLLEKYKIDPKQIG--------RLEVGSETVID------------------------KSKSIKTFLMQ-I   99 (446)
Q Consensus        53 ~~~lA~~Aa~~aL~~agi~~~dId--------~li~~T~t~~~------------------------~~ps~a~~l~~-~   99 (446)
                      ...|+++|+.++|+++|+++++|+        .+++++..+..                        .....++.+.. .
T Consensus      2647 ~~rL~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~is~~~ 2726 (3089)
T 3zen_D         2647 VALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMYHGNLLGRAKPNDILQEVLPNVVAAHVMQSY 2726 (3089)
T ss_dssp             HHHHHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHHHHHTTCCCCTTHHHHTSTTHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHHHHHhcCCCccchhhccccccHHHHHHHHHH
Confidence            577999999999999999999885        57777754310                        01234556654 4


Q ss_pred             hcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCcc------------C------------CCC
Q 013297          100 FEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY------------A------------EGP  155 (446)
Q Consensus       100 LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y------------~------------~~~  155 (446)
                      ||+    +.+++.+..+|+|++.||..|...|++|.+  +.+||.++|..+.            .            ++.
T Consensus      2727 lGl----~GPs~tV~tACSSsl~Al~~A~~~IrsG~~--d~aLaGGve~ls~~~~~~f~~~~als~~~~~~~~~~sp~~~ 2800 (3089)
T 3zen_D         2727 VGG----YGAMVHPVGACATAAVSVEEGVDKIKLGKA--DLVIAGGFDDLTLEAIIGFGDMAATADTEMMRAKGISDSKF 2800 (3089)
T ss_dssp             TCC----CSCEECCBCTTCHHHHHHHHHHHHHHTTSC--SEEEEEEEECCCHHHHHHHHHHTCBCCHHHHHHTTCCTTTS
T ss_pred             cCC----CCCceeeccchhhHHHHHHHHHHHHHCCCC--CeeEEeeecccCHHHHHHHHHhhhhhcchhhhhccCCcccc
Confidence            586    347899999999999999999999999988  9999999997520            0            111


Q ss_pred             --------CCccccccceeeeeccCCCc-----ccccccccccc-cccccccccCCCCC-Cc-ccCChhHHHHHHHHHHH
Q 013297          156 --------ARPTGGAAAVVMLVGPDAPV-----AFESKLRGSHM-SHAYDFYKPNLASE-YP-VVDGKLSQTCYLMALDT  219 (446)
Q Consensus       156 --------~~~t~GdGAvA~Ll~~~~~~-----~~~~~~~g~~~-~~~~df~~p~~~~~-~p-~~dG~~s~~~yl~~l~~  219 (446)
                              +..+.||||+|+||.+....     .+..-+.++.. .+....-.|.++.. +. ..+++          .+
T Consensus      2801 crpFd~~~dG~v~GEGAgavVL~~~e~A~~~G~~I~avI~g~~~n~Dg~~~~~~aP~~g~~~a~~~~q----------~~ 2870 (3089)
T 3zen_D         2801 SRANDRRRLGFLEAQGGGTILLARGDLALKMGLPVLAVVGYAQSFADGVHTSIPAPGLGALGAARGGR----------ES 2870 (3089)
T ss_dssp             CCSSBTTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCCCCCSSCCCCGGGGGSTTGG----------GS
T ss_pred             cCccccCCCCEEEeccceEEEEeeHHHHHhCCCceEEEEEEEEEecCCcccCccCCchhHHhHhhhhH----------HH
Confidence                    12457999999999875310     00001122221 11111111111100 00 01122          13


Q ss_pred             HHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHh---hhhhccccccchhhHhhhhcCCCCCCCC-Cccccc
Q 013297          220 CYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARL---LFNDFMRNASSVDEAAKEKLGPFSTLSG-DESYQS  295 (446)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~g~~~-e~~~~d  295 (446)
                      +++..+++.      |++++|||++..|-.++++.+......   +.+.|                   |... ....  
T Consensus      2871 ai~~AL~~A------Gl~p~DIdyVEaHGTGT~lgD~~E~~al~al~~~f-------------------g~~~~~~~~-- 2923 (3089)
T 3zen_D         2871 TLARSLAQL------GVGADDIAVISKHDTSTLANDPNETELHERIADSM-------------------GRAPGNPLF-- 2923 (3089)
T ss_dssp             HHHHHHHTT------TCCGGGEEEEECCCCCCTTHHHHHHHHHHHHHHHT-------------------TCCTTCCEE--
T ss_pred             HHHHHHHHc------CCCHHHeeEEEEecCCcccccHHHHHHHHHHHHHh-------------------CccCCCcce--
Confidence            444555554      899999999999999988777654331   11111                   1111 0000  


Q ss_pred             hhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHH---HHhcCCC--------------------------
Q 013297          296 RDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASL---IHNKHSE--------------------------  346 (446)
Q Consensus       296 ~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~---l~~~~~~--------------------------  346 (446)
                               +            ...-..+||+.+|+=...|..+   |++ +.+                          
T Consensus      2924 ---------v------------~s~Ks~iGH~~gAAG~~~lik~ll~L~~-g~iPpt~~~~~~np~i~~~~~~~~~~~~~ 2981 (3089)
T 3zen_D         2924 ---------I------------VSQKTLTGHAKGGAAVFQMMGLCQILRD-GVIPPNRSLDCVDDELATSGHFVWVREPL 2981 (3089)
T ss_dssp             ---------E------------ECSHHHHCBCSTTHHHHHHHHHHHHHHH-CCBCCCTTCSSBCGGGGGCSSEEECSSCB
T ss_pred             ---------e------------cccccccCCchhhhhHHHHHHHHHHHhc-CccCCCCCCCCCCCCccccCCeeecCCCc
Confidence                     0            0011467998888865555443   333 211                          


Q ss_pred             -----CCCCEEEEEEeccccceeeEEEEEeCCCCCCChhhHhhh---ccHHHHhccccccc-HHHHHHHHhhhhcceeee
Q 013297          347 -----LDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSNILSV---MNVAGKLKSRHEVI-LHFLQMCFVRYYVFFYII  417 (446)
Q Consensus       347 -----~~G~~vll~syGsG~~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~L~~R~~~~-~ey~~~~~~r~~~~~~~~  417 (446)
                           .+-++.++-|||-|-+-..++++-.+     ........   ....+|.++|.+-. ..|...+..+..+|-.. 
T Consensus      2982 ~w~~~~~~r~a~vnSfGfGG~NahvVle~~~-----~~~~~~~~~~~~~~~~r~~~r~~~~~~~~~~~~~~~~~l~~~~- 3055 (3089)
T 3zen_D         2982 DLRGKFPLKAGLVTSLGFGHVSGLVALVHPE-----AFIAALDPSEREDYRTRAEQRMLAGQRRLVSAIAGGRPMYEKP- 3055 (3089)
T ss_dssp             CCCTTSCCCEEEEEEEETTTEEEEEEEECGG-----GTGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCC-
T ss_pred             cCCCCCCCCEEEEccccCCCCeEEEEEecCc-----hhhhccChHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccC-
Confidence                 01257889999988777666665433     22222222   23556667777766 77777777666555433 


Q ss_pred             eccc
Q 013297          418 LTRL  421 (446)
Q Consensus       418 ~~~~  421 (446)
                      ..||
T Consensus      3056 ~~~~ 3059 (3089)
T 3zen_D         3056 ADRR 3059 (3089)
T ss_dssp             CHHH
T ss_pred             CCCC
Confidence            4444

>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}

Probab=99.02  E-value=9.6e-09  Score=107.91  Aligned_cols=115  Identities=9%  Similarity=0.009  Sum_probs=85.2

Q ss_pred             CCcce-eEEeecceEEecC---CCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccC------------CCCCccHH
Q 013297           30 ASKGK-YTIGLGQECMAFC---SEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETV------------IDKSKSIK   93 (446)
Q Consensus        30 ~~~~k-~~~Glg~r~~av~---~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~------------~~~~ps~a   93 (446)
                      ++|.. .-.|+|+......   ....++.+|+.+|++.+|+++|+++++||.+|.+....            ........
T Consensus        15 vdPRtPVIVGvG~t~~r~~~g~~~~~s~~dL~a~Ai~~AL~dAGl~p~~Vd~vI~g~~~~~~~~~~~~~~~~~g~~~~~~   94 (520)
T 4egv_A           15 VDPRTPVIVGVGQFTERIDLDGYRGMSSVELATEAAKAALHDCGADADTVARAIDTVAGTRQFEISGPASAPLGVSSNYP   94 (520)
T ss_dssp             CCTTCEEEEEEEEEEC--------CCCHHHHHHHHHHHHHHHTSSCHHHHHHHCCEEEECCC--------------CCHH
T ss_pred             CCCCCeEEEEeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHhCcCHHHcceEEEEEeecccccccchhhhhhccccCHH
Confidence            44532 2368776432211   13568999999999999999999999988776443211            11234567


Q ss_pred             HHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecC
Q 013297           94 TFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA  149 (446)
Q Consensus        94 ~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~  149 (446)
                      ..+...||+   +....+.+.++|+++..++..|...|++|.+  +.+|+++.|..
T Consensus        95 ~~va~~lGl---~~~~~~~~~~~caSg~~av~~AA~aI~aG~a--dvvlAgG~EsM  145 (520)
T 4egv_A           95 RSVARNIGA---DPAHAVLEVIGGQSPQHLATEFGGKIAAGEN--DVVLIFGSENT  145 (520)
T ss_dssp             HHHHHHHTC---CCSEEEECCSSTTHHHHHHHHHHHHHHTTSC--SEEEEEEEECC
T ss_pred             HHHHHHcCC---CCceEEEecCCCHHHHHHHHHHHHHHHcCCC--CEEEEEEEEec
Confidence            789999997   4567788889999999999999999999977  99999999975

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=98.57  E-value=7.7e-08  Score=109.45  Aligned_cols=114  Identities=12%  Similarity=0.015  Sum_probs=82.9

Q ss_pred             HHHHHHHHHHHHHHCCCC-cCCc----c----EEEEEeccCCCC------------------------CccHHHHHHH-H
Q 013297           54 ISMSLTAVTNLLEKYKID-PKQI----G----RLEVGSETVIDK------------------------SKSIKTFLMQ-I   99 (446)
Q Consensus        54 ~~lA~~Aa~~aL~~agi~-~~dI----d----~li~~T~t~~~~------------------------~ps~a~~l~~-~   99 (446)
                      ..|+..|+.+||+++|++ |.++    +    .++++|..+...                        ...++.+|.. .
T Consensus      1013 qrLaLeAa~EALedAGI~dP~ei~~~i~~s~vGV~vGSg~Gg~~~l~~~~~~~~~~~~v~~~~l~~~~~nt~Aa~Vs~~~ 1092 (1688)
T 2pff_A         1013 TLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLL 1092 (1688)
T ss_dssp             TTHHHHHHHHHHTTTTCSSGGGGGGGTCCSCSCCCCCCCSCCCSSHHHHHHSSSSCCCCCSTTHHHHCTHHHHHHHHHSS
T ss_pred             HHHHHHHHHHHHHHcCCCChHHhccccCCceEEEEecccCCCHHHHHHHHHHHHhcCCCCcchhccccHHHHHHHHHHHH
Confidence            459999999999999997 5552    2    444555544310                        1134566766 5


Q ss_pred             hcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCcc------------C------------CCC
Q 013297          100 FEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY------------A------------EGP  155 (446)
Q Consensus       100 LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y------------~------------~~~  155 (446)
                      ||+    ..+++.+..||++++.||..|...|++|.+  +.+||.++|....            .            ++.
T Consensus      1093 LGl----~GPs~TVdtACASSL~AL~lA~~aIrsGea--DvaLVGGvE~msp~~~~~Fa~mgaLS~~~~e~a~G~~Pd~~ 1166 (1688)
T 2pff_A         1093 ISS----SGPIKTPVGACATSVESVDIGVETILSGKA--RICIVGGYDDFQEEGSFEFGNMKATSNTLEEFEHGRTPAEM 1166 (1688)
T ss_dssp             CCC----CCCCCCCCCTTTTTHHHHHHHHHHHHTTTC--SCBCCCCCCCCCTTTTTTTTTTSCSCCTTTTTTSSCCSSSS
T ss_pred             cCC----cCCeEEecCCCchHHHHHHHHHHHHHCCCC--CEEEEeeeccCCHHHHHHHHhccccccChhhhhcCCChhhc
Confidence            886    347788999999999999999999999988  9999999997421            0            001


Q ss_pred             C--------CccccccceeeeeccCC
Q 013297          156 A--------RPTGGAAAVVMLVGPDA  173 (446)
Q Consensus       156 ~--------~~t~GdGAvA~Ll~~~~  173 (446)
                      .        ....|+||+++||.+..
T Consensus      1167 cRPFd~~rdGfv~GEGAGavVLesle 1192 (1688)
T 2pff_A         1167 SRPATTTRNGFMEAQGAGIQIIMQAD 1192 (1688)
T ss_dssp             CCSSSSSCCCCCCCSCCEEEEEECSH
T ss_pred             cCcCccCCCCCccccceEEEEeCcHH
Confidence            1        13479999999999753

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=98.49  E-value=1.8e-06  Score=105.39  Aligned_cols=230  Identities=16%  Similarity=0.173  Sum_probs=143.6

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhc--CCC-----cceeEE---eecceEEecCCC-----------------CCC-HH
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHD--GAS-----KGKYTI---GLGQECMAFCSE-----------------VED-VI   54 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~-----~~k~~~---Glg~r~~av~~~-----------------~Ed-~~   54 (446)
                      ..|-|.||+..+|.- -+.+++.+..  |.+     +.++..   +.. ++..+..+                 .-| -.
T Consensus         2 ~~iaI~G~~~~~p~~-~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~fd~~~f~i~~~ea~~~dpq~   79 (2512)
T 2vz8_A            2 EEVVIAGMSGKLPES-ENLEEFWANLIGGVDMVTADDRRWKAGLYGLP-RRMGKLKDLSRFDASFFGVHSKQANTMDPQL   79 (2512)
T ss_dssp             CCEEEEEEEEEBTTB-SSHHHHHHHHHTTCCCEEECSSSSCTTGGGCC-SEEECCSCSSCCCTTTTTCCHHHHHTSCHHH
T ss_pred             CCEEEEeeeeeCCCC-CCHHHHHHHHHcCCccccCCCcccccccccCc-ccceecCCcccCCHhhcCCCHHHHHhcCHHH
Confidence            469999999999984 6777765543  321     111100   000 11111110                 113 35


Q ss_pred             HHHHHHHHHHHHHCCCCcCCcc----EEEEEeccCCCC----------C--------c-cHHHHHHHHhcccCCCCceee
Q 013297           55 SMSLTAVTNLLEKYKIDPKQIG----RLEVGSETVIDK----------S--------K-SIKTFLMQIFEKFGNTDIEGV  111 (446)
Q Consensus        55 ~lA~~Aa~~aL~~agi~~~dId----~li~~T~t~~~~----------~--------p-s~a~~l~~~LGl~g~~~~~~~  111 (446)
                      -|+.+++.++|+++|+++++++    .|++|+.+.++.          .        + ..+.+|...||+    +-+++
T Consensus        80 rl~l~~~~eAle~Ag~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l----~Gps~  155 (2512)
T 2vz8_A           80 RMLLEVTYEAIVDGGINPASLRGTSTGVWVGVSSSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDF----KGPSI  155 (2512)
T ss_dssp             HHHHHHHHHHHGGGTCCGGGGTTCSCEEEEEECCCHHHHHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTC----CSCEE
T ss_pred             HHHHHHHHHHHHHCCCChhhcCCCCeEEEEEeccHHHHHHHhcCccccCcceecccchhHHHHHHHHHhCC----CCCce
Confidence            6899999999999999876553    566776544220          0        1 257899999998    34678


Q ss_pred             eeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCc-------c-------CCCC--------CCccccccceeeee
Q 013297          112 DSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-------Y-------AEGP--------ARPTGGAAAVVMLV  169 (446)
Q Consensus       112 di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-------y-------~~~~--------~~~t~GdGAvA~Ll  169 (446)
                      .+..||++++.||..|...|++|.+  +.+||.+++...       +       .++.        +....|+|++++||
T Consensus       156 tv~tACsSsl~Al~~A~~~l~~g~~--d~al~gG~~~~~~p~~~~~~~~~~~ls~~g~c~~Fd~~adG~~~gEG~~~~vL  233 (2512)
T 2vz8_A          156 TIDTACSSSLLALQSAYQAIRGGEC--SAAVVGGLNVLLKPNSSLQFMKLGMLSQDGTCRSFDAEGTGYCRAEAVVAVLL  233 (2512)
T ss_dssp             EEECTTSTHHHHHHHHHHHHHTSSC--SEEEEEEEECCCCHHHHHHHHHTTCBCTTCSCCSSSTTCCCBCBBCEEEEEEE
T ss_pred             eeccHhHHHHHHHHHHHHHHHcCCC--CeeEEeEeccccCHHHHHHHccCCCCCCCCCCCCCCCCCCCcceeeeEEEEEE
Confidence            8899999999999999999999988  999999999741       1       1121        23458999999999


Q ss_pred             ccCCC-cccccccccccccccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCCceeeccC
Q 013297          170 GPDAP-VAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHS  248 (446)
Q Consensus       170 ~~~~~-~~~~~~~~g~~~~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~  248 (446)
                      .+-.. ..+..-+.|+...  .|-++.. +...|  +|.        +..++++..+++      ++++++||+|+-.|-
T Consensus       234 k~l~~A~~i~a~i~g~~~n--~dg~~~~-~~t~P--~~~--------~q~~~i~~al~~------ag~~p~~i~yveaHG  294 (2512)
T 2vz8_A          234 TKKSLARRVYATILNAGTN--TDGSKEQ-GVTFP--SGD--------VQEQLIRSLYAP------AGPDPESLEYIEAHG  294 (2512)
T ss_dssp             EEGGGCSCCSEEEEEEEEE--ECCCCTT-CSSSC--CHH--------HHHHHHHTTSGG------GSSCTTSCCEEECCC
T ss_pred             EEHHHCCcccEEEEEEEEc--CCCCCCC-CCCCC--CHH--------HHHHHHHHHHHH------cCCCHHHCCEEEeec
Confidence            98643 1222223343322  1212211 11113  221        222344444444      389999999999999


Q ss_pred             cchHHHHHHHH
Q 013297          249 PYNKLVQKSFA  259 (446)
Q Consensus       249 p~~~~~~~~~~  259 (446)
                      .++++.+.+-.
T Consensus       295 TgT~~gD~~E~  305 (2512)
T 2vz8_A          295 TGTKVGDPQEL  305 (2512)
T ss_dssp             CCCTTHHHHHH
T ss_pred             CCCCCCCHHHH
Confidence            99888776543

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=98.37  E-value=3e-05  Score=90.85  Aligned_cols=113  Identities=16%  Similarity=0.075  Sum_probs=83.2

Q ss_pred             HHHHHHHHHHHHHHCCCC-cCCc----c----EEEEEeccCC-------------------CC-----CccHHHHHHHH-
Q 013297           54 ISMSLTAVTNLLEKYKID-PKQI----G----RLEVGSETVI-------------------DK-----SKSIKTFLMQI-   99 (446)
Q Consensus        54 ~~lA~~Aa~~aL~~agi~-~~dI----d----~li~~T~t~~-------------------~~-----~ps~a~~l~~~-   99 (446)
                      ..|+..++.++|+++|++ |.++    +    .+++++..+.                   +.     .-.++.+|... 
T Consensus      1187 ~~l~L~aa~eAL~~AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~vs~~~ 1266 (1878)
T 2uv9_A         1187 TLYVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLDKPVQKDILQESFVNTMAAWVNMLL 1266 (1878)
T ss_dssp             HHHHHHHHHHHHHTTTCSSGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTTTTCCCCSCTTGGGSHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHCCCCChhhhhcccCccceEEEEccCCccHHHHHHHHHHHHhcCCCCchhhhcchHHHHHHHHHHHh
Confidence            558999999999999997 6653    2    5556665442                   00     11356677774 


Q ss_pred             hcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCc----c--------C------------CCC
Q 013297          100 FEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV----Y--------A------------EGP  155 (446)
Q Consensus       100 LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~----y--------~------------~~~  155 (446)
                      ||+.    .+.+.+..||++++.||..|...|++|.+  +.+||.+.|...    +        .            ++.
T Consensus      1267 lg~~----GP~~tv~tACASsl~Al~~A~~~I~sG~a--dvalvGGvd~~~~~~~~~f~~m~als~~~de~a~g~~p~~~ 1340 (1878)
T 2uv9_A         1267 LSST----GPIKTPVGACATAVESLDVGYDTIMQGKA--RVCLVGGFDDFQEEGSYEFANMGATSNAKEEFARGREPGEM 1340 (1878)
T ss_dssp             CCCC----CCBCCBCCGGGHHHHHHHHHHHHHTTTSC--SEEEEEEEECCCHHHHHHHHHHTCBCCHHHHHTTTCCTTSS
T ss_pred             cCCC----CCeEEEcCcchHHHHHHHHHHHHHHcCCC--CEEEEeeeccCChHHHHHHHHhhhhccchhhhhcCCCcccC
Confidence            8863    36778899999999999999999999988  999999999752    0        1            011


Q ss_pred             CC--------ccccccceeeeeccC
Q 013297          156 AR--------PTGGAAAVVMLVGPD  172 (446)
Q Consensus       156 ~~--------~t~GdGAvA~Ll~~~  172 (446)
                      .+        .+.|+||+++||.+.
T Consensus      1341 ~RPfd~~r~Gfv~gEGag~vVL~~~ 1365 (1878)
T 2uv9_A         1341 SRPTSTTRNGFMESQGCGVQVIMTA 1365 (1878)
T ss_dssp             CCSSBTTCCCBCBBCEEEEEEEEEH
T ss_pred             cCCCccCCCCCcccceeEEEEEeeH
Confidence            12        347999999999874

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=98.34  E-value=2.6e-05  Score=91.62  Aligned_cols=91  Identities=16%  Similarity=0.078  Sum_probs=69.6

Q ss_pred             HHHHHHHHHHHHHHHCCC-CcCCc----c----EEEEEeccCC---------C---------------CCccHHHHHHHH
Q 013297           53 VISMSLTAVTNLLEKYKI-DPKQI----G----RLEVGSETVI---------D---------------KSKSIKTFLMQI   99 (446)
Q Consensus        53 ~~~lA~~Aa~~aL~~agi-~~~dI----d----~li~~T~t~~---------~---------------~~ps~a~~l~~~   99 (446)
                      ...|+..++.++|+++|+ +|.++    +    .+++++..+.         +               ..-.++.+|...
T Consensus      1211 ~~~l~L~aa~eAL~dAGi~dp~e~~~~i~~s~vGv~vGs~~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~is~~ 1290 (1887)
T 2uv8_A         1211 ITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNML 1290 (1887)
T ss_dssp             HHHHHHHHHHHHHHHTTCSSGGGHHHHSCGGGEEECCEESSCCHHHHHHHHTTTTTTCCCCTTHHHHHSTTHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCChhhhhcccCCceeEEEeccCCccHHHHHHHHHHHHhcCCCCcchhhcchhhHHHHHHHHH
Confidence            356899999999999999 47662    2    4556665332         0               011356677774


Q ss_pred             -hcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecC
Q 013297          100 -FEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA  149 (446)
Q Consensus       100 -LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~  149 (446)
                       ||+.    .+.+.+..||++++.||..|...|++|.+  +.+||.+.|..
T Consensus      1291 ~lgl~----GP~~tv~tACASsl~Al~~A~~~I~sG~a--dvaLvGGvd~~ 1335 (1887)
T 2uv8_A         1291 LISSS----GPIKTPVGACATSVESVDIGVETILSGKA--RICIVGGYDDF 1335 (1887)
T ss_dssp             TTCCC----SCCCCCCCGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEECC
T ss_pred             HcCCc----cceEEeecccccHHHHHHHHHHHHHcCCC--CEEEEeeeccC
Confidence             8873    36778899999999999999999999988  99999999974

>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A

Probab=91.82  E-value=0.36  Score=47.41  Aligned_cols=83  Identities=19%  Similarity=0.162  Sum_probs=53.1

Q ss_pred             HHHHHHHHHHHCCCCcCCccEEEEEeccCCCCC---ccHHHHHHHHhcccCCC-------CceeeeeC-C--------cC
Q 013297           57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKS---KSIKTFLMQIFEKFGNT-------DIEGVDST-N--------AC  117 (446)
Q Consensus        57 A~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~---ps~a~~l~~~LGl~g~~-------~~~~~di~-~--------aC  117 (446)
                      |++...+.|+++|++|+|+|+|+.+     |..   ..+...+.+++|+  ..       ...-||-. +        ||
T Consensus       209 A~~ti~~~l~d~g~~~~d~D~ivtg-----dL~q~g~~il~~l~~~~g~--~~~~~~~dcg~~iy~~~~~~~~ggsg~~c  281 (347)
T 3lma_A          209 AADTIKQHLEDLGRTPDDYDLILTG-----DLSGVGSPILKDLLKEEGI--NVGTKHNDCGLMIYTPDQQVFAGGSGCAC  281 (347)
T ss_dssp             HHHHHHHHHHHHTCCGGGCSEEEEE-----SCHHHHHHHHHHHHHHTTC--CCGGGEEEGGGTSSCC---------CCCC
T ss_pred             HHHHHHHHHHHhCCCHHHcCEEecC-----ChHHHHHHHHHHHHHHcCC--ChhHCccccceEEecCCCcccCCCCcccc
Confidence            3444489999999999999999853     222   1234456666676  21       12234432 4        77


Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCEEEEEEeecC
Q 013297          118 YGGTAALFNCVNWVESSSWDGRYGLVVCTDSA  149 (446)
Q Consensus       118 ~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~  149 (446)
                      +..+..=.+-.. ++.|.+  +++|+|++=..
T Consensus       282 sa~v~~~~~~~~-~~~g~~--~ril~~~tGal  310 (347)
T 3lma_A          282 SAVVTFAHIFKE-IEAGRL--NRVLVVATGAL  310 (347)
T ss_dssp             HHHHHHHTHHHH-HHTTSC--SEEEEEEEEEC
T ss_pred             HHHHHHHHHHHH-HhcCcc--cEEEEEecccc
Confidence            766655444444 788988  99999998765

>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*

Probab=89.96  E-value=0.68  Score=45.59  Aligned_cols=96  Identities=18%  Similarity=0.098  Sum_probs=59.8

Q ss_pred             HHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeee----CC-cChhHHHHHHHHH
Q 013297           54 ISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDS----TN-ACYGGTAALFNCV  128 (446)
Q Consensus        54 ~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di----~~-aC~gg~~AL~~A~  128 (446)
                      +....++++++|+++|++++|||.+++....... ..    .+.++||+  ...-...++    +| ++++-..+|..+ 
T Consensus       237 ~~~~~~~i~~~L~~~gl~~~did~~v~~hq~~~~-~~----~~~~~lgl--~~ek~~~~~~~~~GNt~aAsipl~L~~~-  308 (357)
T 3s3l_A          237 IDLLVAAKTQALEDAGTAIEDIAHAVIPVSRRGT-GH----ELHDLLGL--PDERTSWAYGRTTGHVGAGDQYAGLAHL-  308 (357)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCSEEECCSCCCCS-SC----CHHHHHTS--CGGGBTHHHHHHHCBCTTCHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHH-HH----HHHHHcCC--CHHHhHHHhccccccchHhHHHHHHHHH-
Confidence            4456678999999999999999999963333222 22    46778898  333222233    22 344444455443 


Q ss_pred             HHHHcCC-CCCCEEEEEEeecCccCCCCCCcccccc--ceeeeeccCC
Q 013297          129 NWVESSS-WDGRYGLVVCTDSAVYAEGPARPTGGAA--AVVMLVGPDA  173 (446)
Q Consensus       129 ~~l~sg~-~~~~~aLVVasD~~~y~~~~~~~t~GdG--AvA~Ll~~~~  173 (446)
                        ++.|. .||+++|+++              ||.|  ..|+||.-..
T Consensus       309 --~~~g~l~~Gd~vll~~--------------fG~G~t~~a~ll~~~~  340 (357)
T 3s3l_A          309 --VENALVQPGDRVLLFG--------------GGAGYTCTAAVVEILR  340 (357)
T ss_dssp             --HHTTCCCTTCEEEEEC--------------CBTTTEEEEEEEEECC
T ss_pred             --HHcCCCCCCCEEEEEE--------------EchhhhheeeeEEecc
Confidence              44543 2678888877              6776  4577776653

>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}

Probab=89.87  E-value=1.8  Score=43.35  Aligned_cols=124  Identities=13%  Similarity=0.160  Sum_probs=65.9

Q ss_pred             ccHHHHHHhcCCCcc-eeEEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHH
Q 013297           19 VQQEALEAHDGASKG-KYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLM   97 (446)
Q Consensus        19 v~~~~l~~~~g~~~~-k~~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~   97 (446)
                      +..++.++.+|..+- ++ .|.+....   ++... .+-...|++++|+++|++++|||.+.+.     +..........
T Consensus       273 L~s~~~A~~~g~~~~a~i-~g~~~~~~---~p~~~-~~~~~~a~~~al~~Agl~~~dId~~e~h-----daf~~~~l~~~  342 (407)
T 3svk_A          273 VGSEKAGKSQGLTPRARI-VATATSGS---DPVIM-LTGPTPATRKVLDRAGLTIDDIDLFELN-----EAFASVVLKFQ  342 (407)
T ss_dssp             EECHHHHHHTTCCCCEEE-EEEEEC---------C-CCTHHHHHHHHHHHHTCCGGGCSEEEEC-----CSBHHHHHHHH
T ss_pred             EeeHHHHHHcCCCCcEEE-EEEEEecc---CCccc-cHHHHHHHHHHHHHcCCCHHHCCEEEEe-----ChhHHHHHHHH
Confidence            445566777776653 43 34443221   11111 1113578999999999999999999863     22223334566


Q ss_pred             HHhcccCCCCceeeee-------C--CcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCccCCCCCCccccccceeee
Q 013297           98 QIFEKFGNTDIEGVDS-------T--NACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVML  168 (446)
Q Consensus        98 ~~LGl~g~~~~~~~di-------~--~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~~~~~~~t~GdGAvA~L  168 (446)
                      +.||+  ...  .+.+       +  .|++|....+..... ++..  ++++.|+..+            ..|..+.|+|
T Consensus       343 ~~lg~--~~~--~vn~~Gg~~~~GHp~gasG~~~~~~~~~~-L~~~--~~~~gl~~~c------------~ggG~g~a~~  403 (407)
T 3svk_A          343 KDLNI--PDE--KLNVNGGAIAMGHPLGATGAMITGTMVDE-LERR--NARRALITLC------------IGGGMGVATI  403 (407)
T ss_dssp             HHHTC--CGG--GBSTTCCHHHHCBCGGGHHHHHHHHHHHH-HHHH--TCCEEEEEEE------------CSSSCEEEEE
T ss_pred             HHhCC--CCC--CCCCCCcHhheeCcHHHHHHHHHHHHHHH-HHhc--CCCEEEEEee------------ccCcceEEEE
Confidence            78887  211  1111       1  244444444444444 4433  2377776432            2345556777


Q ss_pred             ecc
Q 013297          169 VGP  171 (446)
Q Consensus       169 l~~  171 (446)
                      |++
T Consensus       404 ~e~  406 (407)
T 3svk_A          404 IER  406 (407)
T ss_dssp             EEE
T ss_pred             EEc
Confidence            764

>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}

Probab=89.87  E-value=1.4  Score=43.82  Aligned_cols=92  Identities=13%  Similarity=0.195  Sum_probs=55.5

Q ss_pred             HHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCC-Cce----eeeeC--CcChhHHHHHHHHHH
Q 013297           57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNT-DIE----GVDST--NACYGGTAALFNCVN  129 (446)
Q Consensus        57 A~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~-~~~----~~di~--~aC~gg~~AL~~A~~  129 (446)
                      ...|++++|+++|++++|||.+.+.     +........+.+.||+  .. .+.    ...++  .+|+|....+.....
T Consensus       296 ~~~ai~~al~~agl~~~dId~ve~~-----d~fa~~~~~~~~~lg~--~~~~v~~~gg~~~~Gh~~gasG~~~~~~~~~~  368 (395)
T 4e1l_A          296 PIPATRKALKKAGLSINDIDLIEAN-----EAFAAQALAVKNELQI--DSSKLNVNGGAIALGHPIGASGARILVTLIYE  368 (395)
T ss_dssp             HHHHHHHHHHHTTCCGGGCSEEEEC-----CSBHHHHHHHHHHHTC--CGGGBSTTCCHHHHCCCTTTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCHHHcCEEEec-----ChhHHHHHHHHHHhCC--CCCCCCcCCchhhcCCcHHHHHHHHHHHHHHH
Confidence            3578999999999999999999952     2233455667888886  21 111    11122  256665555544444


Q ss_pred             HHHcCCCCCCEEEEEEeecCccCCCCCCccccccceeeeec
Q 013297          130 WVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVG  170 (446)
Q Consensus       130 ~l~sg~~~~~~aLVVasD~~~y~~~~~~~t~GdGAvA~Ll~  170 (446)
                       ++..  .+++.|+..+            ..|-.+.|+||+
T Consensus       369 -L~~~--~~~~gl~~~c------------~ggG~g~a~~~e  394 (395)
T 4e1l_A          369 -MQKR--KVETGLATLC------------IGGGQGISMVVS  394 (395)
T ss_dssp             -HHHH--TCSEEEEEEE------------SSTTEEEEEEEE
T ss_pred             -HHhc--CCCEEEEEEc------------cCCCceEEEEEe
Confidence             4443  2377776542            235555677765

>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1

Probab=88.82  E-value=2.4  Score=42.24  Aligned_cols=93  Identities=13%  Similarity=0.183  Sum_probs=52.6

Q ss_pred             HHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeee-------eC--CcChhHHHHHHHH
Q 013297           57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVD-------ST--NACYGGTAALFNC  127 (446)
Q Consensus        57 A~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~d-------i~--~aC~gg~~AL~~A  127 (446)
                      ...|++++|+++|++++|||.+.+.-.     .........+.||+.  .+-..+.       ++  .+++|. ..+-.+
T Consensus       298 ~~~a~~~al~~Agl~~~dId~ie~hea-----fa~~~l~~~~~lg~~--~~~~~vn~~Gg~~a~GHp~gAsG~-~~~~~~  369 (401)
T 1ulq_A          298 PVPATRKALERAGLSFSDLGLIELNEA-----FAAQALAVLREWSLS--MEDQRLNPNGGAIALGHPLGASGA-RILTTL  369 (401)
T ss_dssp             HHHHHHHHHHHTTCCGGGCSEEEECCS-----BHHHHHHHHHHHTCC--TTCTTBSTTCCHHHHCCCHHHHHH-HHHHHH
T ss_pred             HHHHHHHHHHHcCCCHHHcCEEEEecc-----hHHHHHHHHHHcCCC--CCCCccCCCCcccccCCCcchHHH-HHHHHH
Confidence            368999999999999999999986511     112222333557861  1111122       22  234443 344444


Q ss_pred             HHHHHcCCCCCCEEEEEEeecCccCCCCCCccccccceeeeecc
Q 013297          128 VNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGP  171 (446)
Q Consensus       128 ~~~l~sg~~~~~~aLVVasD~~~y~~~~~~~t~GdGAvA~Ll~~  171 (446)
                      ...|+.+  +.+++|+...            .+|-..+|+||++
T Consensus       370 ~~~L~~~--~~~~gl~~~~------------~ggG~~~a~v~~~  399 (401)
T 1ulq_A          370 VHEMRRR--KVQFGLATMC------------IGVGQGIAVVVEG  399 (401)
T ss_dssp             HHHHHHT--TCSEEEEEEE------------ETTTEEEEEEEEE
T ss_pred             HHHHhhc--CCCEEEEEee------------cCCcccEEEEEEe
Confidence            4555655  3488887542            1344455777764

>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...

Probab=88.62  E-value=1.1  Score=44.53  Aligned_cols=94  Identities=13%  Similarity=0.068  Sum_probs=54.7

Q ss_pred             HHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCc----eeeeeC--CcChhHHHHHHHHHHH
Q 013297           57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDI----EGVDST--NACYGGTAALFNCVNW  130 (446)
Q Consensus        57 A~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~----~~~di~--~aC~gg~~AL~~A~~~  130 (446)
                      ...|++++|+++|++++|||.+.+.     +.....+-.+.+.||+.. ..+    -..-++  .+++|....+.. ...
T Consensus       292 ~~~a~~~al~~agl~~~dId~ie~~-----d~f~~~~l~~~~~lg~~~-~~vn~~gg~~~~GHp~gAsG~~~~~~~-~~~  364 (392)
T 2vu1_A          292 PIPASRKALERAGWKIGDLDLVEAN-----EAFAAQACAVNKDLGWDP-SIVNVNGGAIAIGHPIGASGARILNTL-LFE  364 (392)
T ss_dssp             HHHHHHHHHHHHTCCGGGCSEEEEC-----CSBHHHHHHHHHHHCCCG-GGBSTTCCHHHHCCCGGGHHHHHHHHH-HHH
T ss_pred             HHHHHHHHHHHcCCCHHHcCEEEec-----cccHHHHHHHHHHcCCCc-ccCCCCccHhhhCCChhhHHHHHHHHH-HHH
Confidence            3679999999999999999999863     333333444678898721 111    111222  244544444444 444


Q ss_pred             HHcCCCCCCEEEEEEeecCccCCCCCCccccccceeeeecc
Q 013297          131 VESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGP  171 (446)
Q Consensus       131 l~sg~~~~~~aLVVasD~~~y~~~~~~~t~GdGAvA~Ll~~  171 (446)
                      ++.+  +++++|+..+-            .|..+.|+||+.
T Consensus       365 L~~~--~~~~gl~~~~~------------ggG~~~a~~~e~  391 (392)
T 2vu1_A          365 MKRR--GARKGLATLCI------------GGGMGVAMCIES  391 (392)
T ss_dssp             HHHH--TCSEEEEEEEE------------TTTEEEEEEEEC
T ss_pred             Hhcc--CCCEEEEEEec------------ccchheEEEEEe
Confidence            5544  34788874321            244556777764

>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}

Probab=87.93  E-value=0.97  Score=45.11  Aligned_cols=93  Identities=16%  Similarity=0.269  Sum_probs=54.9

Q ss_pred             HHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCc--ee--eeeCC--cChhHHHHHHHHHHH
Q 013297           57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDI--EG--VDSTN--ACYGGTAALFNCVNW  130 (446)
Q Consensus        57 A~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~--~~--~di~~--aC~gg~~AL~~A~~~  130 (446)
                      ...|++++|+++|++++|||.+.+.     +........+.+.||+.. ..+  .+  .-+++  +|+|... +-.+...
T Consensus       297 ~~~a~~~al~~Agl~~~dId~ve~~-----d~f~~~~~~~~~~lg~~~-~~~n~~gg~~~~GH~~gasG~~~-~~~~~~~  369 (396)
T 4dd5_A          297 PVPATKKALEAANMTIEDIDLVEAN-----EAFAAQSVAVIRDLNIDM-NKVNVNGGAIAIGHPIGCSGARI-LTTLLYE  369 (396)
T ss_dssp             HHHHHHHHHHHHTCCGGGCSEEEEC-----CSBHHHHHHHHHHHTCCT-TSBSTTCCHHHHCCCHHHHHHHH-HHHHHHH
T ss_pred             HHHHHHHHHHHcCCCHHHcCEEEec-----ChHHHHHHHHHHHhCCCC-CccCCCCchhhccCcHHHHHHHH-HHHHHHH
Confidence            4678999999999999999999852     223344556778888621 111  11  11222  4444443 4444444


Q ss_pred             HHcCCCCCCEEEEEEeecCccCCCCCCccccccceeeeec
Q 013297          131 VESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVG  170 (446)
Q Consensus       131 l~sg~~~~~~aLVVasD~~~y~~~~~~~t~GdGAvA~Ll~  170 (446)
                      |+..  .++++|+..+            .+|..++|+||+
T Consensus       370 L~~~--~~~~gl~~~c------------~ggG~g~a~~~e  395 (396)
T 4dd5_A          370 MKRR--DAKTGLATLC------------IGGGMGTTLIVK  395 (396)
T ss_dssp             HHHH--TCSEEEEEEE------------ETTTEEEEEEEE
T ss_pred             HHhc--CCCeEEEEEc------------ccCCceeEEEEe
Confidence            5544  3378877542            245556677775

>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}

Probab=87.20  E-value=2.3  Score=42.22  Aligned_cols=94  Identities=15%  Similarity=0.190  Sum_probs=52.8

Q ss_pred             HHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeee-------eCC--cChhHHHHHHHH
Q 013297           57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVD-------STN--ACYGGTAALFNC  127 (446)
Q Consensus        57 A~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~d-------i~~--aC~gg~~AL~~A  127 (446)
                      ...|++++|+++|++++|||.+.+.-.     .........+.||+.. .....+.       +++  +++|. ..+-.+
T Consensus       284 ~~~a~~~al~~agl~~~did~ve~h~~-----f~~~~~~~~~~lg~~~-~~~~~vn~~gg~~~~GH~~gasG~-~~~~~~  356 (387)
T 3goa_A          284 PVPASKLALKKAGLSASDIDVFEMNEA-----FAAQILPCIKDLGLME-QIDEKINLNGGAIALGHPLGCSGA-RISTTL  356 (387)
T ss_dssp             HHHHHHHHHHHHTCCGGGCSEEEECCS-----BHHHHHHHHHHTTCGG-GHHHHBSTTCCHHHHCCCHHHHHH-HHHHHH
T ss_pred             HHHHHHHHHHHcCCCHHHcCEEEEeCc-----chHHHHHHHHHhCCCc-CCCccCCCCCchhcccCCHHHHHH-HHHHHH
Confidence            368999999999999999999986421     1123344566777510 0111122       222  33443 334444


Q ss_pred             HHHHHcCCCCCCEEEEEEeecCccCCCCCCccccccceeeeecc
Q 013297          128 VNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGP  171 (446)
Q Consensus       128 ~~~l~sg~~~~~~aLVVasD~~~y~~~~~~~t~GdGAvA~Ll~~  171 (446)
                      ...|+..  ++++.|+..+            ..|..+.|+||++
T Consensus       357 ~~~L~~~--~~~~gl~~~c------------~ggG~g~a~~~e~  386 (387)
T 3goa_A          357 INLMERK--DAQFGLATMC------------IGLGQGIATVFER  386 (387)
T ss_dssp             HHHHHHT--TCSEEEEEEE------------ETTTEEEEEEEEC
T ss_pred             HHHHHhc--CCCEEEEEec------------cCcCceEEEEEEe
Confidence            4445544  3478877432            1345566777764

>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}

Probab=86.71  E-value=2.1  Score=41.25  Aligned_cols=81  Identities=11%  Similarity=0.090  Sum_probs=50.3

Q ss_pred             HHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCC-Cce-eee-eCC-cChhHHHHHHHHHHH
Q 013297           55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNT-DIE-GVD-STN-ACYGGTAALFNCVNW  130 (446)
Q Consensus        55 ~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~-~~~-~~d-i~~-aC~gg~~AL~~A~~~  130 (446)
                      ....++.+++|+++|++++|||.++.....     ..+-..+.+.||+  .. +.. .++ ++| .+++...+|..   .
T Consensus       224 ~~~~~~i~~aL~~agl~~~did~~~~H~~~-----~~~~d~~~~~lg~--~~~~~~~~~~~~Gnt~sAs~~~~L~~---~  293 (331)
T 2x3e_A          224 TQMSDSVRRVLDRVGWQASDLHHLVPHQAN-----TRILAAVADQLDL--PVERVVSNIAEVGNTVAASIPLALAH---G  293 (331)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCSEEEECCCC-----HHHHHHHHHHHTC--CGGGBCCCHHHHCBCGGGHHHHHHHH---H
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEEcCCC-----HHHHHHHHHHcCC--CHHHHhhhHhhhCcHHHHHHHHHHHH---H
Confidence            456678999999999999999999863322     1233458889997  32 222 111 222 44444444443   3


Q ss_pred             HHcCC-CCCCEEEEEE
Q 013297          131 VESSS-WDGRYGLVVC  145 (446)
Q Consensus       131 l~sg~-~~~~~aLVVa  145 (446)
                      ++.+. .+|+++|+++
T Consensus       294 ~~~~~~~~G~~vll~~  309 (331)
T 2x3e_A          294 LRQGILRDGGNMVLTG  309 (331)
T ss_dssp             HHTTCSCTTCEEEEEE
T ss_pred             HHhCCCCCCCEEEEEE
Confidence            45553 2678999887

>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A

Probab=86.05  E-value=2.6  Score=40.12  Aligned_cols=81  Identities=11%  Similarity=0.019  Sum_probs=49.2

Q ss_pred             HHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCC-Ccee-ee-eC-CcChhHHHHHHHHHHH
Q 013297           55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNT-DIEG-VD-ST-NACYGGTAALFNCVNW  130 (446)
Q Consensus        55 ~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~-~~~~-~d-i~-~aC~gg~~AL~~A~~~  130 (446)
                      .-...+.+++|+++|++++|||.++.....     +..--.+.+.||+  .. +... +. ++ ..++++..+|..   +
T Consensus       212 ~~~~~~i~~al~~agl~~~did~~~~H~~~-----~~~~d~~~~~lg~--~~~~~~~~~~~~Gh~~~as~~~~L~~---~  281 (313)
T 1zow_A          212 RIMGDASTRVVEKANLTSDDIDLFIPHQAN-----IRIMESARERLGI--SKDKMSVSVNKYGNTSAASIPLSIDQ---E  281 (313)
T ss_dssp             HHHHHHHHHHHHHTTCCGGGCSEEEECCSC-----HHHHHHHHHHHTC--CGGGBCCCHHHHCBCGGGHHHHHHHH---H
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEEcCCC-----HHHHHHHHHHhCC--CHHHHHHhHhhhCchHHHHHHHHHHH---H
Confidence            355678899999999999999999864322     1233347888887  32 2221 11 12 244444444443   3


Q ss_pred             HHcCC-CCCCEEEEEE
Q 013297          131 VESSS-WDGRYGLVVC  145 (446)
Q Consensus       131 l~sg~-~~~~~aLVVa  145 (446)
                      ++.+. .+|+++|+++
T Consensus       282 ~~~~~~~~g~~vl~~~  297 (313)
T 1zow_A          282 LKNGKLKDDDTIVLVG  297 (313)
T ss_dssp             HHTTCCCTTCEEEEEE
T ss_pred             HHcCCCCCCCEEEEEE
Confidence            45553 2678898887

>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*

Probab=85.90  E-value=2.3  Score=40.58  Aligned_cols=79  Identities=16%  Similarity=0.069  Sum_probs=49.1

Q ss_pred             HHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeee----C-CcChhHHHHHHHHHHH
Q 013297           56 MSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDS----T-NACYGGTAALFNCVNW  130 (446)
Q Consensus        56 lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di----~-~aC~gg~~AL~~A~~~  130 (446)
                      ...++.+++|+++|++++|||.++.....     ..+-..+.+.||+  ... ....+    + ..+++...+|..   +
T Consensus       219 ~~~~~i~~aL~~agl~~~did~v~~H~~~-----~~~~d~i~~~lg~--~~~-~~~~~~~~~Gn~~~As~~~~L~~---~  287 (317)
T 1hnj_A          219 ELAHIVDETLAANNLDRSQLDWLVPHQAN-----LRIISATAKKLGM--SMD-NVVVTLDRHGNTSAASVPCALDE---A  287 (317)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCCEEEECCSC-----HHHHHHHHHHTTC--CGG-GBCCCHHHHCBCGGGHHHHHHHH---H
T ss_pred             HHHHHHHHHHHHcCCCHHHCCEEEEcCCC-----HHHHHHHHHHcCC--CHH-HhHhhHhhhCcHHHHHHHHHHHH---H
Confidence            45678899999999999999999864321     1223358888997  322 11222    2 244444444443   3


Q ss_pred             HHcCC-CCCCEEEEEE
Q 013297          131 VESSS-WDGRYGLVVC  145 (446)
Q Consensus       131 l~sg~-~~~~~aLVVa  145 (446)
                      ++.+. .+|+++|+++
T Consensus       288 ~~~~~~~~G~~vll~~  303 (317)
T 1hnj_A          288 VRDGRIKPGQLVLLEA  303 (317)
T ss_dssp             HHTTCSCTTCEEEEEE
T ss_pred             HHhCCCCCCCEEEEEE
Confidence            45553 2688999887

>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2

Probab=85.71  E-value=3  Score=40.26  Aligned_cols=81  Identities=16%  Similarity=0.090  Sum_probs=50.2

Q ss_pred             HHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCC-ceee---eeCC-cChhHHHHHHHHHH
Q 013297           55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTD-IEGV---DSTN-ACYGGTAALFNCVN  129 (446)
Q Consensus        55 ~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~-~~~~---di~~-aC~gg~~AL~~A~~  129 (446)
                      ....++.+++|+++|++++|||.++.....     ..+-..+.+.||+  ... -...   +++| .+++...+|..   
T Consensus       231 ~~~~~~i~~aL~~agl~~~did~v~~H~~~-----~~~~d~i~~~lg~--~~~~~~~~~~~~~Gn~~sAs~~~~L~~---  300 (339)
T 1mzj_A          231 ADVVPAAREALEVAGLTVGDLVAFVPHQAN-----LRIIDVLVDRLGV--PEHVVVSRDAEDTGNTSSASVALALDR---  300 (339)
T ss_dssp             HHHHHHHHHHHHTTTCCGGGCSEEEECCSC-----HHHHHHHHHHHTC--CTTSEECCTHHHHCBCTTHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEECCCC-----HHHHHHHHHHhCC--CccceeeehhhhcCchHHHHHHHHHHH---
Confidence            456678999999999999999999864321     1223358889997  333 1111   1222 44444444443   


Q ss_pred             HHHcCC-CCCCEEEEEE
Q 013297          130 WVESSS-WDGRYGLVVC  145 (446)
Q Consensus       130 ~l~sg~-~~~~~aLVVa  145 (446)
                      .++.+. .+|+++|+++
T Consensus       301 ~~~~g~~~~G~~vll~~  317 (339)
T 1mzj_A          301 LVRSGAVPGGGPALMIG  317 (339)
T ss_dssp             HHHHTSSCTTCEEEEEE
T ss_pred             HHHcCCCCCCCEEEEEE
Confidence            345553 2678999887

>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}

Probab=85.65  E-value=2.2  Score=40.54  Aligned_cols=80  Identities=13%  Similarity=0.111  Sum_probs=48.6

Q ss_pred             HHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCC-Cce-ee-eeC-CcChhHHHHHHHHHHHH
Q 013297           56 MSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNT-DIE-GV-DST-NACYGGTAALFNCVNWV  131 (446)
Q Consensus        56 lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~-~~~-~~-di~-~aC~gg~~AL~~A~~~l  131 (446)
                      ...++.+++|+++|++++|||.++.....     ...-..+.+.||+  .. +.. .+ .++ ..++++..+|..   .+
T Consensus       211 ~~~~~i~~al~~agl~~~did~~~~H~~~-----~~~~~~~~~~lg~--~~~~~~~~~~~~Gh~~~As~~~~L~~---~~  280 (309)
T 2ebd_A          211 SMEEVCREVLEKAGVKPEEVSLVIPHQAN-----VRIINALAEKLNI--PKEKVFVNIQKYGNTSAASIPIALHE---AI  280 (309)
T ss_dssp             HHHHHHHHHHHHHTCCGGGCSEEEECCSC-----HHHHHHHHHHTTC--CGGGBCCCHHHHCBCGGGHHHHHHHH---HH
T ss_pred             HHHHHHHHHHHHcCCCHHHCCEEEEcCCC-----HHHHHHHHHHhCC--CHHHhhhhHhhhcchHHHHHHHHHHH---HH
Confidence            45678999999999999999999864321     1123357888987  22 222 11 122 244444444443   34


Q ss_pred             HcCC-CCCCEEEEEE
Q 013297          132 ESSS-WDGRYGLVVC  145 (446)
Q Consensus       132 ~sg~-~~~~~aLVVa  145 (446)
                      +.+. .+|+++|+++
T Consensus       281 ~~g~~~~G~~~l~~~  295 (309)
T 2ebd_A          281 KEGKVKRGDLILMTA  295 (309)
T ss_dssp             HTTCCCTTCEEEEEE
T ss_pred             HcCCCCCCCEEEEEE
Confidence            4553 2678998887

>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}

Probab=85.64  E-value=1.9  Score=42.84  Aligned_cols=41  Identities=15%  Similarity=0.097  Sum_probs=32.0

Q ss_pred             HHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcc
Q 013297           57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK  102 (446)
Q Consensus        57 A~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl  102 (446)
                      ...|++++|+++|++++|||.+.+.     +........+.+.||+
T Consensus       294 ~~~a~~~al~~agl~~~dId~ve~~-----d~fa~~~~~~~~~lg~  334 (394)
T 3ss6_A          294 PAPAIRKGLEKVDWSLEDADLLEIN-----EAFAAQYLAVEKELDL  334 (394)
T ss_dssp             HHHHHHHHHHHHTCCGGGCSEEEEC-----CSBHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHcCCCHHHcCEEEeC-----CchHHHHHHHHHHhCC
Confidence            3678999999999999999999952     2233455667888986

>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}

Probab=85.49  E-value=2.5  Score=40.84  Aligned_cols=82  Identities=16%  Similarity=0.058  Sum_probs=51.8

Q ss_pred             HHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeC--C--cChhHHHHHHHHHH
Q 013297           54 ISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST--N--ACYGGTAALFNCVN  129 (446)
Q Consensus        54 ~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~--~--aC~gg~~AL~~A~~  129 (446)
                      +....++.+++|+++|++++|||.++....     .+.+-..+++.||+  +..-....+.  .  ++++-..+|..   
T Consensus       223 ~~~~~~~i~~~l~~~gl~~~did~~v~Hq~-----~~~i~~~~~~~lgl--~~ek~~~~l~~~GNt~sasi~~~L~~---  292 (323)
T 3il3_A          223 VRELSNVVEETLLANNLDKKDLDWLVPHQA-----NLRIITATAKKLEM--DMSQVVVTLDKYANNSAATVPVALDE---  292 (323)
T ss_dssp             HHHHHHHHHHHHHTTTCCTTTCCEEEECCS-----CHHHHHHHHHHTTC--CGGGBCCCHHHHCBCGGGHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCCEEEEcCC-----CHHHHHHHHHHcCc--CHHHhhccHhhcCchHHHHHHHHHHH---
Confidence            344557788999999999999999986432     23455678889998  3332222332  2  33444444433   


Q ss_pred             HHHcCC-CCCCEEEEEE
Q 013297          130 WVESSS-WDGRYGLVVC  145 (446)
Q Consensus       130 ~l~sg~-~~~~~aLVVa  145 (446)
                      +++.|. .||+++|+++
T Consensus       293 ~~~~g~~~~Gd~vll~~  309 (323)
T 3il3_A          293 AIRDGRIQRGQLLLLEA  309 (323)
T ss_dssp             HHHTTSSCTTCEEEEEE
T ss_pred             HHHcCCCCCCCEEEEEE
Confidence            345553 3678998887

>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A

Probab=85.43  E-value=2.5  Score=41.60  Aligned_cols=84  Identities=11%  Similarity=-0.030  Sum_probs=51.8

Q ss_pred             HHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeC--CcChhHHHHHHHHHHHH
Q 013297           54 ISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST--NACYGGTAALFNCVNWV  131 (446)
Q Consensus        54 ~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~--~aC~gg~~AL~~A~~~l  131 (446)
                      .....++++++|+++|++++|||.++...     ..+.+-..+++.||+  +..-....+.  ..|++...-+.+ ..++
T Consensus       265 ~~~~~~~i~~~L~~~gl~~~did~~v~Hq-----~n~~i~~~~~~~Lgl--~~ek~~~~l~~~GNtssAsipl~L-~~~~  336 (365)
T 3gwa_A          265 LAEVPRAADRLLALAGEPRENIDCFVLHQ-----ANRFMLDALRKKMKI--PEHKFPVLMEHCGNTVSSTLPLAL-ETMR  336 (365)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGCSEEEECC-----CCHHHHHHHHHHHTC--CGGGSCCCCTTTCBCGGGHHHHHH-HHHH
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCCEEEEcC-----CCHHHHHHHHHHhCC--CHHHHHHHHhcccchHHHHHHHHH-HHHH
Confidence            44556778999999999999999998643     233455678899998  3332222232  233333322222 2345


Q ss_pred             HcCC-CCCCEEEEEE
Q 013297          132 ESSS-WDGRYGLVVC  145 (446)
Q Consensus       132 ~sg~-~~~~~aLVVa  145 (446)
                      +.|. .||+++|+++
T Consensus       337 ~~g~~~~Gd~vll~~  351 (365)
T 3gwa_A          337 ANGTLARGMRLMLLG  351 (365)
T ss_dssp             HTTCCCTTCEEEEEE
T ss_pred             HcCCCCCCCEEEEEE
Confidence            5553 3678898887

>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A

Probab=85.26  E-value=1.6  Score=43.40  Aligned_cols=95  Identities=13%  Similarity=0.161  Sum_probs=53.9

Q ss_pred             HHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccC---CCCceeeeeC--CcChhHHHHHHHHHHHH
Q 013297           57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFG---NTDIEGVDST--NACYGGTAALFNCVNWV  131 (446)
Q Consensus        57 A~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g---~~~~~~~di~--~aC~gg~~AL~~A~~~l  131 (446)
                      ...|++++|+++|++++|||.+.+.     +......-.+.+.||+..   +.+--..-++  .|++|.. .+-.+...|
T Consensus       297 ~~~a~~~al~~Agl~~~dId~ie~~-----d~f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~-~~~~~~~~L  370 (397)
T 1wl4_A          297 PIPAIKQAVTKAGWSLEDVDIFEIN-----EAFAAVSAAIVKELGLNPEKVNIEGGAIALGHPLGASGCR-ILVTLLHTL  370 (397)
T ss_dssp             HHHHHHHHHHHHTCCGGGCCEEEEC-----CSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHH-HHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEEe-----cccHHHHHHHHHHcCCCCcCcCCCcCccccCCChhhhHHH-HHHHHHHHH
Confidence            4689999999999999999999852     222233445778888610   0011111122  2344433 333344445


Q ss_pred             HcCCCCCCEEEEEEeecCccCCCCCCccccccceeeeecc
Q 013297          132 ESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGP  171 (446)
Q Consensus       132 ~sg~~~~~~aLVVasD~~~y~~~~~~~t~GdGAvA~Ll~~  171 (446)
                      +..  +++++|+..+-            +|..+.|+||++
T Consensus       371 ~~~--~~~~gl~~~~~------------ggG~~~a~~~e~  396 (397)
T 1wl4_A          371 ERM--GRSRGVAALCI------------GGGMGIAMCVQR  396 (397)
T ss_dssp             HHH--TCCEEEEEEEE------------TTTEEEEEEEEE
T ss_pred             hhc--CCCEEEEEEec------------ccchheEEEEEe
Confidence            544  34788875421            233445888764

>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}

Probab=85.13  E-value=2.4  Score=40.97  Aligned_cols=82  Identities=16%  Similarity=0.024  Sum_probs=51.6

Q ss_pred             HHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeC--C--cChhHHHHHHHHHH
Q 013297           54 ISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST--N--ACYGGTAALFNCVN  129 (446)
Q Consensus        54 ~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~--~--aC~gg~~AL~~A~~  129 (446)
                      .....++.+++|+++|++++|||.++....     .+.+-..+++.||+  ...-....+.  .  ++++-..+|.   .
T Consensus       233 ~~~~~~~i~~~l~~~gl~~~did~~~~Hq~-----~~~i~~~~~~~lgl--~~~~~~~~l~~~GNt~sasi~~~L~---~  302 (333)
T 4dfe_A          233 VNVLEKVAVEALEKANLSAEQIDWLIPHQA-----NIRIMQSTCRKLGL--PQERMIVTVGEHGNTSAASIPLALD---V  302 (333)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCSEEEECCS-----CHHHHHHHHHHTTC--CGGGBCCCHHHHCBCGGGHHHHHHH---H
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCCEEEEcCC-----CHHHHHHHHHHhCC--CHHHhhhhHHhcCchHHHHHHHHHH---H
Confidence            345567789999999999999999976432     23455678889997  3332222232  2  3333344443   3


Q ss_pred             HHHcCC-CCCCEEEEEE
Q 013297          130 WVESSS-WDGRYGLVVC  145 (446)
Q Consensus       130 ~l~sg~-~~~~~aLVVa  145 (446)
                      +++.|. .+|+++|+++
T Consensus       303 ~~~~g~~~~Gd~vll~~  319 (333)
T 4dfe_A          303 AVRDGRIKRGQNVLIEG  319 (333)
T ss_dssp             HHHTTCSCTTCEEEEEE
T ss_pred             HHHcCCCCCCCEEEEEE
Confidence            455553 3678888887

>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A

Probab=85.06  E-value=2.8  Score=40.80  Aligned_cols=81  Identities=6%  Similarity=-0.061  Sum_probs=50.8

Q ss_pred             HHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeee---C-CcChhHHHHHHHHHHH
Q 013297           55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDS---T-NACYGGTAALFNCVNW  130 (446)
Q Consensus        55 ~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di---~-~aC~gg~~AL~~A~~~  130 (446)
                      ....++.+++|+++|++++|||.++....     .+.+-..+++.||+  ...-....+   + .++++...+|..+   
T Consensus       246 ~~~~~~i~~~l~~~gl~~~did~~v~Hq~-----~~~i~~~~~~~lgl--~~ek~~~~l~~~GNt~sasi~~~L~~~---  315 (345)
T 3s21_A          246 KLAQKTFVAAKQVLGWAVEELDQFVIHQV-----SRPHTAAFVKSFGI--DPAKVMTIFGEHGNIGPASVPIVLSKL---  315 (345)
T ss_dssp             HHHHHHHHHHHHHHCCCGGGCSEEEECCS-----CHHHHHHHHHHHTC--CGGGBCCCHHHHCBCGGGHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEeCCC-----CHHHHHHHHHHcCc--CHHHceeeHhhcCchHHHHHHHHHHHH---
Confidence            34456778999999999999999986432     23455678889998  332221222   2 2444444444443   


Q ss_pred             HHcCC-CCCCEEEEEE
Q 013297          131 VESSS-WDGRYGLVVC  145 (446)
Q Consensus       131 l~sg~-~~~~~aLVVa  145 (446)
                      ++.|. .+|+++|+++
T Consensus       316 ~~~g~~~~Gd~vll~~  331 (345)
T 3s21_A          316 KELGRLKKGDRIALLG  331 (345)
T ss_dssp             HHHTCCCTTCEEEEEE
T ss_pred             HHcCCCCCCCEEEEEE
Confidence            44442 3678898887

>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}

Probab=84.94  E-value=5.4  Score=41.26  Aligned_cols=119  Identities=13%  Similarity=0.002  Sum_probs=71.1

Q ss_pred             ccHHHHHHhcCCCcc-eeE-EeecceEEe--cCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHH
Q 013297           19 VQQEALEAHDGASKG-KYT-IGLGQECMA--FCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKT   94 (446)
Q Consensus        19 v~~~~l~~~~g~~~~-k~~-~Glg~r~~a--v~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~   94 (446)
                      |..++.++..|+.+. ++. .|.....-.  ...++.....-...|++++|+++|++++|||++.+.     +-.+...-
T Consensus       277 L~S~e~A~~lGl~p~a~I~~~a~a~~~~~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~E~~-----dAF~~~~l  351 (520)
T 4egv_A          277 MMSVESARKLGVPEEKWVYLRGHADMKEPKLLERADIGASPASVTAVNEALRVAGIGLDDVAAFDLY-----SCFPFPVF  351 (520)
T ss_dssp             EEEHHHHHHHTCCGGGCEEEEEEEEEECCCGGGCSCTTCCHHHHHHHHHHHHHHTCCGGGEEEEEEC-----CSSSHHHH
T ss_pred             EeeHHHHHHcCCCCceEEEEEEEeccCCcccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEEe-----CCcHHHHH
Confidence            455677777787764 332 222211100  001122223345679999999999999999999875     23455667


Q ss_pred             HHHHHhcccCCCCceeee-------eCC-cChhHHHHHHHHHHHHHcCCCCCCEEEEEE
Q 013297           95 FLMQIFEKFGNTDIEGVD-------STN-ACYGGTAALFNCVNWVESSSWDGRYGLVVC  145 (446)
Q Consensus        95 ~l~~~LGl~g~~~~~~~d-------i~~-aC~gg~~AL~~A~~~l~sg~~~~~~aLVVa  145 (446)
                      ...+.||+.. .+-..+.       +++ ..++|+.++-.+..-|+.+  .+++.|+.+
T Consensus       352 ~~~~~lG~~~-~~~~~~n~~Gg~~~~Ghp~~a~g~~~~~~~v~~lr~~--~~~~~L~~~  407 (520)
T 4egv_A          352 NICDGTGLAT-DDPRGLTLTGGLPFFGGLGNNYSMHGIAEAVNEMRDK--PGQFALVGA  407 (520)
T ss_dssp             HHHHHHCCCT-TCTTCSCSSCCHHHHCSCSSSHHHHHHHHHHHHHHHS--TTCEEEEEE
T ss_pred             HHHHHhCCCC-CCCCCcCCCcccccCCChHHHHHHHHHHHHHHHHhcC--CCCceEEeC
Confidence            7888899721 1111111       232 2345667777777778877  669999864

>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A

Probab=83.02  E-value=3.6  Score=39.46  Aligned_cols=82  Identities=13%  Similarity=0.137  Sum_probs=49.5

Q ss_pred             HHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCC-ceeeee---CC-cChhHHHHHHHHHH
Q 013297           55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTD-IEGVDS---TN-ACYGGTAALFNCVN  129 (446)
Q Consensus        55 ~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~-~~~~di---~~-aC~gg~~AL~~A~~  129 (446)
                      ....++++++|+++|++++|||.++.....     +.+-..+.+.||+  ..+ .....+   +| ++++...+|..   
T Consensus       232 ~~~~~~i~~al~~agl~~~dId~~~~H~~~-----~~~~~~~~~~lg~--~~~~~~~~~~~~~Gnt~sAs~~~~L~~---  301 (335)
T 1u6e_A          232 FKMGDVGRRAMDAAGVRPDQIDVFVPHQAN-----SRINELLVKNLQL--RPDAVVANDIEHTGNTSAASIPLAMAE---  301 (335)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCCEEEECCSC-----HHHHHHHHHHHTC--CTTCEECCTHHHHCBCGGGHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEECCCC-----HHHHHHHHHHcCC--CchhhhhhhhhhhCcHHHHHHHHHHHH---
Confidence            456678999999999999999999864322     2233457888997  333 111112   22 33333334433   


Q ss_pred             HHHcCC-CCCCEEEEEEe
Q 013297          130 WVESSS-WDGRYGLVVCT  146 (446)
Q Consensus       130 ~l~sg~-~~~~~aLVVas  146 (446)
                      +++.+. .+|+++|+++.
T Consensus       302 ~~~~~~~~~g~~~l~~~~  319 (335)
T 1u6e_A          302 LLTTGAAKPGDLALLIGY  319 (335)
T ss_dssp             HHHHTSSCTTCEEEEEEE
T ss_pred             HHHcCCCCCCCEEEEEEE
Confidence            334443 26789998873

>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2

Probab=82.73  E-value=2.8  Score=40.03  Aligned_cols=81  Identities=19%  Similarity=0.121  Sum_probs=48.6

Q ss_pred             HHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCC-Cce-ee-eeCC-cChhHHHHHHHHHHH
Q 013297           55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNT-DIE-GV-DSTN-ACYGGTAALFNCVNW  130 (446)
Q Consensus        55 ~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~-~~~-~~-di~~-aC~gg~~AL~~A~~~  130 (446)
                      .-..++.+++|+++|++++|||.++......     ..-..+.+.||+  .. ++. .+ .++| .++++..+|..   .
T Consensus       220 ~~~~~~i~~al~~agl~~~did~~~~H~~~~-----~~~d~~~~~lg~--~~~~~~~~~~~~Gh~~~As~~~~l~~---~  289 (322)
T 1ub7_A          220 RVMNTATLEAIEKAGLTPEDIRLFVPHQANL-----RIIDAARERLGL--PWERVAVNVDRYGNTSTASIPLALKE---A  289 (322)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCSEEEECCSCH-----HHHHHHHHTTTC--CGGGBCCCHHHHCBCGGGHHHHHHHH---H
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEEcCCCH-----HHHHHHHHHcCC--CHHHHHHHHHhhCcHHHHHHHHHHHH---H
Confidence            4566789999999999999999998643221     122357888887  22 221 11 1222 33444444433   3


Q ss_pred             HHcCCC-CCCEEEEEE
Q 013297          131 VESSSW-DGRYGLVVC  145 (446)
Q Consensus       131 l~sg~~-~~~~aLVVa  145 (446)
                      ++.+.. +|+++|+++
T Consensus       290 l~~g~~~~g~~~l~~~  305 (322)
T 1ub7_A          290 VDAGRIREGDHVLLVS  305 (322)
T ss_dssp             HHHTSSCTTCEEEEEE
T ss_pred             HHhCCCCCCCEEEEEE
Confidence            455532 678888887

>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}

Probab=82.67  E-value=2.7  Score=40.87  Aligned_cols=81  Identities=11%  Similarity=0.111  Sum_probs=51.6

Q ss_pred             HHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceee-ee---CC-cChhHHHHHHHHHH
Q 013297           55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGV-DS---TN-ACYGGTAALFNCVN  129 (446)
Q Consensus        55 ~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~-di---~~-aC~gg~~AL~~A~~  129 (446)
                      ....++++++|+++|++++|||.+++..     ..+.+-..+++.||+  +.+.... .+   +| ++++-..+|..+  
T Consensus       249 ~~~~~~i~~~L~~~gl~~~did~~v~Hq-----~~~~i~~~~~~~Lgl--~~~~~~~~~l~~~GNtssasi~~~L~~~--  319 (350)
T 4ewp_A          249 WSMAKVAREALDAAGVEPEDLAAFIPHQ-----ANMRIIDEFAKQLKL--PESVVVARDIADAGNTSAASIPLAMHRL--  319 (350)
T ss_dssp             HTHHHHHHHHHHHHTCCGGGEEEEEECC-----SCHHHHHHHHHHTTC--CTTSEECCTHHHHCBCGGGHHHHHHHHH--
T ss_pred             HhhhHHHHHHHHhhcCChhHhceEEecC-----CCHHHHHHHHHHcCc--ChHhEEecccccccchHHHHHHHHHHHH--
Confidence            4455788999999999999999998642     233455678899998  4332221 22   32 444444555443  


Q ss_pred             HHHcCC-CCCCEEEEEE
Q 013297          130 WVESSS-WDGRYGLVVC  145 (446)
Q Consensus       130 ~l~sg~-~~~~~aLVVa  145 (446)
                       ++.|. .+|+++|+++
T Consensus       320 -~~~g~~~~Gd~vll~~  335 (350)
T 4ewp_A          320 -LEENPELSGGLALQIG  335 (350)
T ss_dssp             -HHHCGGGTTSEEEEEE
T ss_pred             -HHhCCCCCcCEEEEEE
Confidence             44443 2678998887

>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*

Probab=82.63  E-value=7  Score=38.63  Aligned_cols=74  Identities=8%  Similarity=0.144  Sum_probs=43.4

Q ss_pred             ccHHHHHHhcCCCc-ceeEEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHH
Q 013297           19 VQQEALEAHDGASK-GKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLM   97 (446)
Q Consensus        19 v~~~~l~~~~g~~~-~k~~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~   97 (446)
                      +..++-++.+|..+ .++ .|.+...   .++.. ...-...|++++|+++|++++|||.+.+.     |.....+-...
T Consensus       263 L~s~~~A~~~g~~~~a~I-~g~~~~~---~~p~~-~~~~~~~a~~~al~~Agl~~~dId~ie~~-----D~f~~~~l~~~  332 (395)
T 2ib8_A          263 LMTADAAKRLNVTPLARI-VAFADAA---VEPID-FPIAPVYAASMVLKDVGLKKEDIAMWEVN-----EAFSLVVLANI  332 (395)
T ss_dssp             EEEHHHHHHTTCCCCEEE-EEEEEEE---CCGGG-GGGHHHHHHHHHHHHHTCCGGGEEEEEEC-----CSBHHHHHHHH
T ss_pred             EecHHHHHhcCCCccEEE-EEEEEec---cChhh-ccccHHHHHHHHHHHcCCCHHHcCEEEEc-----cccHHHHHHHH
Confidence            34456666677666 344 3555432   12221 11224679999999999999999999842     22222333333


Q ss_pred             HHhcc
Q 013297           98 QIFEK  102 (446)
Q Consensus        98 ~~LGl  102 (446)
                      +.||+
T Consensus       333 e~lg~  337 (395)
T 2ib8_A          333 KMLEI  337 (395)
T ss_dssp             HHHTC
T ss_pred             HHcCC
Confidence            44886

>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A

Probab=82.16  E-value=2.3  Score=42.21  Aligned_cols=81  Identities=10%  Similarity=0.016  Sum_probs=49.0

Q ss_pred             HHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCC-cee----e-eeCCcChhHHHHHHHHHH
Q 013297           56 MSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTD-IEG----V-DSTNACYGGTAALFNCVN  129 (446)
Q Consensus        56 lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~-~~~----~-di~~aC~gg~~AL~~A~~  129 (446)
                      -..++.+++|+++|++++|||.++.....     ..+-..+.+.||+  ... ...    + +++| |++...-+ .-..
T Consensus       288 ~~~~~i~~aL~~agl~~~dId~~~~H~~~-----~~i~d~~~~~lgl--~~~k~~~s~~~~~~~GN-t~sAsi~~-~L~~  358 (393)
T 1ted_A          288 GVAPVVTEMLWDNGLQISDIDLWAIHPGG-----PKIIEQSVRSLGI--SAELAAQSWDVLARFGN-MLSVSLIF-VLET  358 (393)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCSCEEECCSC-----HHHHHHHHHHHTC--CGGGGHHHHHHHHHHCB-CTHHHHHH-HHHH
T ss_pred             HHHHHHHHHHHHcCCCHhHCCEEEECCCc-----HHHHHHHHHHcCC--CHHHHHHHHHHHHhhCC-chHhHHHH-HHHH
Confidence            44567799999999999999999863221     2234468888997  332 211    1 2233 33332222 2234


Q ss_pred             HHHcCCC--CCCEEEEEE
Q 013297          130 WVESSSW--DGRYGLVVC  145 (446)
Q Consensus       130 ~l~sg~~--~~~~aLVVa  145 (446)
                      +++.+..  +|+++|+++
T Consensus       359 ~~~~g~~~~~Gd~vll~~  376 (393)
T 1ted_A          359 MVQQAESAKAISTGVAFA  376 (393)
T ss_dssp             HHHSCSSSSSSEEEEEEE
T ss_pred             HHhcCccCCCCCeEEEEE
Confidence            4566753  678898887

>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*

Probab=82.08  E-value=3.4  Score=40.99  Aligned_cols=41  Identities=10%  Similarity=0.149  Sum_probs=30.0

Q ss_pred             HHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcc
Q 013297           57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK  102 (446)
Q Consensus        57 A~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl  102 (446)
                      ...|++++|+++|++++|||.+.+.     +........+.+.||+
T Consensus       287 ~~~a~~~al~~Agl~~~dId~ve~~-----d~f~~~~~~~~~~lg~  327 (390)
T 1wdk_C          287 PVPATQKALKRAGLNMADIDFIELN-----EAFAAQALPVLKDLKV  327 (390)
T ss_dssp             HHHHHHHHHHHHTCCGGGCCEEEEC-----CSBHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHcCCChhhCcEEEec-----cCCHHHHHHHHHHcCC
Confidence            3689999999999999999999853     1122234456677876

>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*

Probab=81.70  E-value=3.2  Score=40.76  Aligned_cols=81  Identities=11%  Similarity=0.000  Sum_probs=52.1

Q ss_pred             HHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeee---C-CcChhHHHHHHHHHH
Q 013297           54 ISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDS---T-NACYGGTAALFNCVN  129 (446)
Q Consensus        54 ~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di---~-~aC~gg~~AL~~A~~  129 (446)
                      .....++++++|+++|++++|||.++....     .+.+-..+++.||+  ...-....+   + .++++-..+|..+..
T Consensus       253 ~~~~~~~i~~~L~~~gl~~~did~~v~Hq~-----n~~i~~~~~~~lgl--~~ek~~~~l~~~GNt~sAsi~l~L~~~~~  325 (359)
T 3h78_A          253 SQTLVRIAGEMLAAHELTLDDIDHVICHQP-----NLRILDAVQEQLGI--PQHKFAVTVDRLGNMASASTPVTLAMFWP  325 (359)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCSEEEECCS-----CHHHHHHHHHHHTC--CGGGBCCCHHHHCBCGGGHHHHHHHHHGG
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHHHHhCc--CHHHhhhhhhcccchHHHHHHHHHHHHHH
Confidence            344557889999999999999999876432     23455678889998  333222223   2 244555555554433


Q ss_pred             HHHcCCCCCCEEEEEE
Q 013297          130 WVESSSWDGRYGLVVC  145 (446)
Q Consensus       130 ~l~sg~~~~~~aLVVa  145 (446)
                         . ..||+++|+++
T Consensus       326 ---~-l~~Gd~vll~~  337 (359)
T 3h78_A          326 ---D-IQPGQRVLVLT  337 (359)
T ss_dssp             ---G-SCTTCEEEEEE
T ss_pred             ---h-CCCCCEEEEEE
Confidence               2 23778999887

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	446
d1xpma2	221	c.95.1.2 (A:168-388) 3-hydroxy-3-methylglutaryl Co	6e-49
d1xpma1	166	c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA	2e-30
d1teda_	372	c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacte	3e-10
d1u6ea1	184	c.95.1.2 (A:-10-174) Ketoacyl-ACP synthase III (Fa	5e-10

>d1xpma2 c.95.1.2 (A:168-388) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} Length = 221

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS
species: Staphylococcus aureus [TaxId: 1280]

 Score =  164 bits (416), Expect = 6e-49
 Identities = 55/224 (24%), Positives = 90/224 (40%), Gaps = 51/224 (22%)

Query: 175 VAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGK 234
           +A       ++    YDF++P    +YP+VDG LS+  Y+ +    +     +  K    
Sbjct: 2   LALNED-AVAYTEDVYDFWRPT-GHKYPLVDGALSKDAYIRSFQQSWNEYAKRQGK---- 55

Query: 235 QFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQ 294
             SL++     FH P+ K+ +K+   ++ N         DE  +E+L             
Sbjct: 56  --SLADFASLCFHVPFTKMGKKALESIIDNA--------DETTQERL------------- 92

Query: 295 SRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVL 354
                            +  + +    + VGN+YT SLY +L SL+ N      G+ + L
Sbjct: 93  ----------------RSGYEDAVDYNRYVGNIYTGSLYLSLISLLEN-RDLQAGETIGL 135

Query: 355 FSYGSGLTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEV 398
           FSYGSG     +S  L EG+      + L        L +R EV
Sbjct: 136 FSYGSGSVGEFYSATLVEGYK-----DHLDQAAHKALLNNRTEV 174

>d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} Length = 166

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS
species: Staphylococcus aureus [TaxId: 1280]

 Score =  113 bits (284), Expect = 2e-30
 Identities = 43/169 (25%), Positives = 71/169 (42%), Gaps = 7/169 (4%)

Query: 5   VGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNL 64
           +GI  ++ Y P   V    L         K+ IG+GQ  MA     +D++SM   A    
Sbjct: 2   IGIDKINFYVPKYYVDMAKLAEARQVDPNKFLIGIGQTEMAVSPVNQDIVSMGANAA--K 59

Query: 65  LEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAAL 124
                 D K+IG + V +E+ +D +K+    +  +            +   ACY  T A+
Sbjct: 60  DIITDEDKKKIGMVIVATESAVDAAKAAAVQIHNLL--GIQPFARCFEMKEACYAATPAI 117

Query: 125 FNCVNWVESSSWDGRYGLVVCTDSAVYA-EGPARPTGGAAAVVMLVGPD 172
               +++   +      LV+ TD+A Y       PT GA AV M++  +
Sbjct: 118 QLAKDYLA--TRPNEKVLVIATDTARYGLNSGGEPTQGAGAVAMVIAHN 164

>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 372

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Polyketide synthase PKS18
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 59.1 bits (142), Expect = 3e-10
 Identities = 40/330 (12%), Positives = 75/330 (22%), Gaps = 58/330 (17%)

Query: 50  VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIE 109
            E  + +++      L        +IG L + + T            +        +   
Sbjct: 89  YEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGV--DVAIVKELGLSPSISR 146

Query: 110 GVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY---------AEGPARPTG 160
            V +   C     AL    N+V +        LVVC +                     G
Sbjct: 147 VVVNFMGCAAAMNALGTATNYVRAHP--AMKALVVCIELCSVNAVFADDINDVVIHSLFG 204

Query: 161 GAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTC 220
              A +++         E        S +             V    ++           
Sbjct: 205 DGCAALVIGASQVQEKLEPGKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYI 264

Query: 221 YKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEK 280
           +  +                A         N L          +        + E +   
Sbjct: 265 FSGV----------------APVVTEMLWDNGLQISDIDLWAIHPGGP---KIIEQSVRS 305

Query: 281 LGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLI 340
           LG                          +       S  +  + GNM + SL   L +++
Sbjct: 306 LG--------------------------ISAELAAQSWDVLARFGNMLSVSLIFVLETMV 339

Query: 341 HNKHSELDGKRVVLFSYGSGLTATMFSLKL 370
               S       V F++G G+T       +
Sbjct: 340 QQAESAKAISTGVAFAFGPGVTVEGMLFDI 369

>d1u6ea1 c.95.1.2 (A:-10-174) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 184

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 56.5 bits (135), Expect = 5e-10
 Identities = 32/175 (18%), Positives = 57/175 (32%), Gaps = 9/175 (5%)

Query: 2   AKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAV 61
           A++VG+L++  Y P   V  + +  H  +S        G +   F ++ E   SM+  A 
Sbjct: 10  ARSVGLLSVGAYRPERVVTNDEICQHIDSSDEWIYTRTGIKTRRFAADDESAASMATEAC 69

Query: 62  TNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGT 121
              L    +    I  + V + T   ++      +           I G D +    G  
Sbjct: 70  RRALSNAGLSAADIDGVIVTTNTHFLQTPPAAPMVAASLG---AKGILGFDLSAGAAGFG 126

Query: 122 AALFNCVNWVESSSWDGRYGLVVCTDSAV----YAEGPARPTGGAAAVVMLVGPD 172
            AL    + +          LVV T+         +          A  ++VG  
Sbjct: 127 YALGAAADMIRGGGA--ATMLVVGTEKLSPTIDMYDRGNCFIFADGAAAVVVGET 179

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	446
d1teda_	372	Polyketide synthase PKS18 {Mycobacterium tuberculo	100.0
d1xpma2	221	3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap	100.0
d1xpma1	166	3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap	100.0
d1u6ea1	184	Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu	100.0
d1hnja1	174	Ketoacyl-ACP synthase III (FabH) {Escherichia coli	100.0
d1mzja1	181	Priming beta-ketosynthase from the r1128 polyketid	100.0
d1ub7a1	172	Ketoacyl-ACP synthase III (FabH) {Thermus thermoph	99.98
d1u0ma1	200	Putative polyketide synthase SCO1206 {Streptomyces	99.94
d1bi5a1	235	Chalcone synthase {Alfalfa (Medicago sativa) [TaxI	99.93
d1hnja2	143	Ketoacyl-ACP synthase III (FabH) {Escherichia coli	99.81
d1ub7a2	149	Ketoacyl-ACP synthase III (FabH) {Thermus thermoph	99.81
d1mzja2	153	Priming beta-ketosynthase from the r1128 polyketid	99.81
d1u6ea2	148	Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu	99.8
d1u0ma2	148	Putative polyketide synthase SCO1206 {Streptomyces	99.7
d1ee0a2	160	Pyrone synthase (PyS, chalcone synthase 2) {Gerber	99.55
d1u0ua2	156	Dihydropinosylvin synthase {Scots pine (Pinus sylv	99.55
d1bi5a2	154	Chalcone synthase {Alfalfa (Medicago sativa) [TaxI	99.54
d1j3na1	249	Beta-ketoacyl-ACP synthase II {Thermus thermophilu	98.86
d1ulqa1	273	Beta-ketoadipyl CoA thiolase {Thermus thermophilus	98.82
d1m3ka1	268	Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3	98.81
d1ox0a1	256	Beta-ketoacyl-ACP synthase II {Streptococcus pneum	98.8
d2gfva1	250	Beta-ketoacyl-ACP synthase II {Escherichia coli [T	98.71
d1wdkc1	262	Fatty oxidation complex beta subunit (3-ketoacyl-C	98.61
d1e5ma1	250	Beta-ketoacyl-ACP synthase II {Synechocystis sp. [	98.58
d1afwa1	269	Thiolase {Baker's yeast (Saccharomyces cerevisiae)	98.48
d1tqya1	216	Actinorhodin polyketide putative beta-ketoacyl syn	97.99
d1tqyb1	208	Actinorhodin polyketide putative beta-ketoacyl syn	97.9
d2ix4a1	270	Beta-ketoacyl-ACP synthase II {Thale cress (Arabid	97.87
d2vbaa1	253	Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta	97.72
d1mzja2	153	Priming beta-ketosynthase from the r1128 polyketid	95.97
d1ub7a2	149	Ketoacyl-ACP synthase III (FabH) {Thermus thermoph	95.8
d1u6ea2	148	Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu	95.22
d1tqyb2	194	Actinorhodin polyketide putative beta-ketoacyl syn	94.8
d1hnja2	143	Ketoacyl-ACP synthase III (FabH) {Escherichia coli	92.99
d1m3ka2	124	Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3	92.63
d1tqya2	205	Actinorhodin polyketide putative beta-ketoacyl syn	92.62
d1wdkc2	128	Fatty oxidation complex beta subunit (3-ketoacyl-C	89.93
d1j3na2	159	Beta-ketoacyl-ACP synthase II {Thermus thermophilu	87.94
d1ulqa2	125	Beta-ketoadipyl CoA thiolase {Thermus thermophilus	86.74
d1afwa2	124	Thiolase {Baker's yeast (Saccharomyces cerevisiae)	86.72
d1e5ma2	161	Beta-ketoacyl-ACP synthase II {Synechocystis sp. [	86.32
d1afwa2	124	Thiolase {Baker's yeast (Saccharomyces cerevisiae)	84.67
d1teda_	372	Polyketide synthase PKS18 {Mycobacterium tuberculo	83.92
d1m3ka2	124	Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3	82.4

>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Polyketide synthase PKS18
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=3.1e-44  Score=362.01  Aligned_cols=311  Identities=16%  Similarity=0.179  Sum_probs=239.0

Q ss_pred             eeEEeEEEEecCCccccHHHHHHhcCC---Cc---cee-----EEeecceEEecCCC---------------------CC
Q 013297            4 NVGILAMDIYFPPTCVQQEALEAHDGA---SK---GKY-----TIGLGQECMAFCSE---------------------VE   51 (446)
Q Consensus         4 ~vgI~~i~~y~P~~~v~~~~l~~~~g~---~~---~k~-----~~Glg~r~~av~~~---------------------~E   51 (446)
                      ...|.++|+|+|++.|+|+|+++..+.   ++   +|+     ++||.+||++..+.                     +|
T Consensus        11 ~a~I~g~g~~~P~~~v~n~e~~~~~~~~~~~~~~~~~~~ri~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~r~~~~~e   90 (372)
T d1teda_          11 VAVIEGLATGTPRRVVNQSDAADRVAELFLDPGQRERIPRVYQKSRITTRRMAVDPLDAKFDVFRREPATIRDRMHLFYE   90 (372)
T ss_dssp             EEEEEEEEEECCSCEEEHHHHHHHHHTC----CCTTHHHHHHHTSCCSEEECSSCTTSTTHHHHTTCSSCHHHHHHHHHH
T ss_pred             eEEEEEEEEeCCCeEEcHHHHHHHHHhhcCChHHHHHHHHHHHccCCcccceeccccccchhhhhhcCCCHHHHHHHHHh
Confidence            457999999999999999999887632   22   222     36999999764321                     25


Q ss_pred             CHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeC-CcChhHHHHHHHHHHH
Q 013297           52 DVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST-NACYGGTAALFNCVNW  130 (446)
Q Consensus        52 d~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~-~aC~gg~~AL~~A~~~  130 (446)
                      ++.+||++|+++||+++|++++|||+||++|+|+ +..|+++++|+++||+  .+++..+++. .||+|++.||++|..+
T Consensus        91 ~~~~la~~Aa~~aL~~ag~~~~dId~lI~~t~t~-~~~P~~a~~v~~~LGl--~~~~~~~~~~~~gC~g~~~aL~~A~~~  167 (372)
T d1teda_          91 HAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTG-FIAPGVDVAIVKELGL--SPSISRVVVNFMGCAAAMNALGTATNY  167 (372)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSC-CCSSCHHHHHHHHHTC--CTTCEEEEEESCGGGHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCC-CCCchHHHHHHhhhcc--CCceeEeeccccCccHHHHHHHHHHHH
Confidence            6889999999999999999999999999999875 6799999999999998  6777888886 5999999999999999


Q ss_pred             HHcCCCCCCEEEEEEeecCccC-CCCC-------CccccccceeeeeccCCCc-ccccc---ccccccc---cccccccc
Q 013297          131 VESSSWDGRYGLVVCTDSAVYA-EGPA-------RPTGGAAAVVMLVGPDAPV-AFESK---LRGSHMS---HAYDFYKP  195 (446)
Q Consensus       131 l~sg~~~~~~aLVVasD~~~y~-~~~~-------~~t~GdGAvA~Ll~~~~~~-~~~~~---~~g~~~~---~~~df~~p  195 (446)
                      |++|.  .++||||++|.+++. ...+       ..+|||||+|+||++++.. .+...   ..+.+..   +..+.+..
T Consensus       168 l~sg~--~~~~LVV~~E~~s~~~~~~d~~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (372)
T d1teda_         168 VRAHP--AMKALVVCIELCSVNAVFADDINDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVVRSSFSQLLDNTEDGIVL  245 (372)
T ss_dssp             HHHST--TCEEEEEEEEECGGGCCCCSSHHHHHHHHHBCEEEEEEEEEEECTTSCCCTTCEEEEEEEEEECTTCTTSEEE
T ss_pred             HhcCC--CccceeeeehhhcccccCCCcchhhhhhhhhcccceeEEeccCCcccccCCceeEEecccccccCCCcccccc
Confidence            99995  499999999988542 1111       2579999999999987642 11111   1122111   11111110


Q ss_pred             C-CCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchh
Q 013297          196 N-LASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVD  274 (446)
Q Consensus       196 ~-~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~  274 (446)
                      . ....+..++++.......+.+.++++.++++.      +++++|||+|++||++.+|++.+.++|             
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~------gl~~~did~~i~Hq~~~~i~~~i~~~L-------------  306 (372)
T d1teda_         246 GVNHNGITCELSENLPGYIFSGVAPVVTEMLWDN------GLQISDIDLWAIHPGGPKIIEQSVRSL-------------  306 (372)
T ss_dssp             EEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHT------TCCGGGCSCEEECCSCHHHHHHHHHHH-------------
T ss_pred             CCCCCcceeechHHHHHHHHHHHHHHHHHHHHhc------CCCHHHhhhhhccCccHHHHHHHHHHc-------------
Confidence            0 01123345666666666677888888888876      899999999999999999999999998             


Q ss_pred             hHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCCCC-CCEEE
Q 013297          275 EAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELD-GKRVV  353 (446)
Q Consensus       275 ~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~-G~~vl  353 (446)
                                 |++.++....      ..++                +++||++|||+|++|.+++++ ++..+ |++++
T Consensus       307 -----------gl~~ek~~~s------~~~l----------------~~~GN~~sasip~~L~~~l~~-g~~~~g~d~vl  352 (372)
T d1teda_         307 -----------GISAELAAQS------WDVL----------------ARFGNMLSVSLIFVLETMVQQ-AESAKAISTGV  352 (372)
T ss_dssp             -----------TCCGGGGHHH------HHHH----------------HHHCBCTHHHHHHHHHHHHHS-CSSSSSSEEEE
T ss_pred             -----------CCCHHHhhhh------HHHH----------------hccCCcHHHHHHHHHHHHHHh-CCCCCCCCEEE
Confidence                       8887764311      1223                789999999999999999998 67655 58999


Q ss_pred             EEEeccccceeeEEEEEeC
Q 013297          354 LFSYGSGLTATMFSLKLSE  372 (446)
Q Consensus       354 l~syGsG~~~~~~~l~~~~  372 (446)
                      +++||+|++++++++++..
T Consensus       353 l~~fG~G~s~~~~ll~~~~  371 (372)
T d1teda_         353 AFAFGPGVTVEGMLFDIIR  371 (372)
T ss_dssp             EEEEETTTEEEEEEEEECC
T ss_pred             EEEEcHHHhHHHHhheeec
Confidence            9999999999999999863

>d1xpma2 c.95.1.2 (A:168-388) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS
species: Staphylococcus aureus [TaxId: 1280]

Probab=100.00  E-value=2.4e-41  Score=314.04  Aligned_cols=186  Identities=27%  Similarity=0.431  Sum_probs=168.2

Q ss_pred             ccccccccccccccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHH
Q 013297          176 AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQ  255 (446)
Q Consensus       176 ~~~~~~~g~~~~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~  255 (446)
                      ++++ ..++|+.+++|||||+ .+++|+|||++|+.||++++.+|++.++++.      +.+++|||++|||+||++|++
T Consensus         3 ~~~~-~~~~y~~~~~DF~rP~-~~~~pvvDG~~S~~~Yl~~l~~~~~~~~~~~------g~~~~dfd~~~fH~P~~km~~   74 (221)
T d1xpma2           3 ALNE-DAVAYTEDVYDFWRPT-GHKYPLVDGALSKDAYIRSFQQSWNEYAKRQ------GKSLADFASLCFHVPFTKMGK   74 (221)
T ss_dssp             EECS-CCEEEECCCCSEECBT-TCSSCEECHHHHHHHHHHHHHHHHHHHHHHH------TCCGGGCSEEEECCSSHHHHH
T ss_pred             EEeC-CCEeeeccCccccCCC-CCCCCeECCcchHHHHHHHHHHHHHHHHHHc------CCChhhhheEEeecCchhhHH
Confidence            3444 4788999999999998 6789999999999999999999999999987      688899999999999999999


Q ss_pred             HHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHH
Q 013297          256 KSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAA  335 (446)
Q Consensus       256 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~  335 (446)
                      |++++|+.+.                                     ....++.|+++++||+.+++++|||||||+|++
T Consensus        75 ka~~~l~~~~-------------------------------------~~~~~~~~~~~~~~s~~~~~~iGN~YTaSlyl~  117 (221)
T d1xpma2          75 KALESIIDNA-------------------------------------DETTQERLRSGYEDAVDYNRYVGNIYTGSLYLS  117 (221)
T ss_dssp             HHHHTTGGGS-------------------------------------CHHHHHHHHHHHHHHTTGGGGTCCCGGGHHHHH
T ss_pred             HHHHHHHhcc-------------------------------------chhhHHHHHHhhhhHHHHHHhcCCcchHHHHHH
Confidence            9999884220                                     123467789999999999999999999999999


Q ss_pred             HHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEEeCCCCCCChhhHhhhccHHHHhccccccc-HHHHHHHHhhhhc
Q 013297          336 LASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEVI-LHFLQMCFVRYYV  412 (446)
Q Consensus       336 L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~R~~~~-~ey~~~~~~r~~~  412 (446)
                      |+++|++ +.+++|+||+|||||||+++++|++++++     ++++++.+.++.++|++|++++ ++|+++++.+...
T Consensus       118 L~Sll~~-~~~~~G~rIglfSYGSG~~ae~fs~~V~~-----~~~~~~~~~~l~~~L~~R~~l~~~~Ye~~~~~~~~~  189 (221)
T d1xpma2         118 LISLLEN-RDLQAGETIGLFSYGSGSVGEFYSATLVE-----GYKDHLDQAAHKALLNNRTEVSVDAYETFFKRFDDV  189 (221)
T ss_dssp             HHHHHHH-SCCCTTCEEEEEEEETTTEEEEEEEEECT-----TGGGGCCHHHHHHHHHTCEECCHHHHHHHHHHHHTT
T ss_pred             HHhhhcc-ccCCCCCEEEEEEecCCcceeEEEEEEcc-----cHHHHHhhccHHHHHhCCccCCHHHHHHHHHhccCC
Confidence            9999998 66789999999999999999999999999     8999999999999999999999 9999999877653

>d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS
species: Staphylococcus aureus [TaxId: 1280]

Probab=100.00  E-value=1.9e-35  Score=264.63  Aligned_cols=164  Identities=26%  Similarity=0.439  Sum_probs=149.6

Q ss_pred             eeEEeEEEEecCCccccHHHHHHhcCCCcceeEEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEec
Q 013297            4 NVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSE   83 (446)
Q Consensus         4 ~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~   83 (446)
                      .|||.++++|+|+++|+++|+++..|.+++|+..++|.+++.+++++|++.+||++|++++|++.  ++++||+||++|+
T Consensus         1 ~VgI~~~~~ylP~~~v~~~e~~~~~g~~~~~i~~~~Gi~~r~~~~~~E~~~~ma~~Aa~~al~~~--~~~~id~li~~t~   78 (166)
T d1xpma1           1 AIGIDKINFYVPKYYVDMAKLAEARQVDPNKFLIGIGQTEMAVSPVNQDIVSMGANAAKDIITDE--DKKKIGMVIVATE   78 (166)
T ss_dssp             CEEEEEEEEECCSEEEEHHHHHHHTTSCHHHHHTTTCCSEEEECCTTCCHHHHHHHHHHTTCCHH--HHHHEEEEEEECS
T ss_pred             CeeEeEEEEECCCeEEcHHHHHHHhCCCHHHHHHhcCcEEEEeCCCccCHHHHHHHHHHhhhccc--cCCCCCeEEEecc
Confidence            48999999999999999999999999999998544555555577999999999999999999885  5789999999999


Q ss_pred             cCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCccC-CCCCCccccc
Q 013297           84 TVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYA-EGPARPTGGA  162 (446)
Q Consensus        84 t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~-~~~~~~t~Gd  162 (446)
                      ++++..|+.+..++++||+  .+++.+||++++|+|+++||++|.+|++++..  +++|||++|+.++. +.+.+++|||
T Consensus        79 ~~~~~~p~~a~~v~~~lg~--~~~~~~~dv~~~C~g~~~al~~A~~~i~~~~~--~~alvV~sd~~~~~~~~~~~~~fGD  154 (166)
T d1xpma1          79 SAVDAAKAAAVQIHNLLGI--QPFARCFEMKEACYAATPAIQLAKDYLATRPN--EKVLVIATDTARYGLNSGGEPTQGA  154 (166)
T ss_dssp             SCSBSSSCHHHHHHHHTTC--CSSCEEEEEESTTTTHHHHHHHHHHHHTTCTT--CEEEEEEEEEECCCTTCSSGGGCEE
T ss_pred             ccccccchhHHHHHHhhcc--ccceEEeeecccHHHHHHHHHHHhhHHhcCCC--CeEEEEEEceEeccCCCCCCccCCC
Confidence            9999999999999999998  67899999999999999999999999999955  99999999998775 4567899999


Q ss_pred             cceeeeeccCC
Q 013297          163 AAVVMLVGPDA  173 (446)
Q Consensus       163 GAvA~Ll~~~~  173 (446)
                      ||+|+||+++|
T Consensus       155 GA~A~ll~~~P  165 (166)
T d1xpma1         155 GAVAMVIAHNP  165 (166)
T ss_dssp             EEEEEEEEESC
T ss_pred             eeEEEEEecCC
Confidence            99999999987

>d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=8.5e-34  Score=255.63  Aligned_cols=165  Identities=21%  Similarity=0.238  Sum_probs=149.6

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhcCCCcceeE--EeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEE
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYT--IGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEV   80 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~--~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~   80 (446)
                      |..+|.++|.|+|+++++++++++..|.+++|+.  +|+.+|+  +++++|+..+|+++|++++|+++++++++||+||+
T Consensus         1 m~a~I~g~g~ylP~~~v~n~el~~~~~~~~~~i~~~~Gi~~r~--~~~~~~~~~~la~~Aa~~al~~a~~~~~~Id~li~   78 (174)
T d1hnja1           1 MYTKIIGTGSYLPEQVRTNADLEKMVDTSDEWIVTRTGIRERH--IAAPNETVSTMGFEAATRAIEMAGIEKDQIGLIVV   78 (174)
T ss_dssp             CEEEEEEEEEECCSEEEEHHHHHTTSSCCHHHHHHHHCCCEEE--ECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEE
T ss_pred             CccEEEEEEEECCCCcccHHHHHHHhCCCHHHHHhccCcceee--ecCCCccchHHHHHHHHHhhhhcccccccccEEEE
Confidence            5689999999999999999999999999999884  6777766  55899999999999999999999999999999999


Q ss_pred             EeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCcc-CCCCC---
Q 013297           81 GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AEGPA---  156 (446)
Q Consensus        81 ~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~~~~---  156 (446)
                      +|+++++..|+++.+|+++||+   +++.+||++++|+|++.||++|..|+++|.+  +++|||++|+.+. .+..+   
T Consensus        79 ~s~~~~~~~P~~a~~v~~~Lgl---~~~~~~di~~~C~g~~~al~~A~~~i~sg~~--~~~Lvv~~e~~S~~~~~~d~~~  153 (174)
T d1hnja1          79 ATTSATHAFPSAACQIQSMLGI---KGCPAFDVAAACAGFTYALSVADQYVKSGAV--KYALVVGSDVLARTCDPTDRGT  153 (174)
T ss_dssp             ECSCCSCSSSCHHHHHHHHHTC---CSSCEEEECCGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEECHHHHSCTTCHHH
T ss_pred             ecCCccccccchhhhhhhccCC---CchhhhhhhhhhccHHHHHHHHHHHHhcCCc--ceeEEEeeehhhcccCCCCCCe
Confidence            9999999999999999999997   5799999999999999999999999999966  9999999999843 33332   


Q ss_pred             CccccccceeeeeccCCC
Q 013297          157 RPTGGAAAVVMLVGPDAP  174 (446)
Q Consensus       157 ~~t~GdGAvA~Ll~~~~~  174 (446)
                      .++|||||+|+||++++.
T Consensus       154 ~~lfGDgA~A~vl~~~~~  171 (174)
T d1hnja1         154 IIIFGDGAGAAVLAASEE  171 (174)
T ss_dssp             HTTBCCEEEEEEEEEESS
T ss_pred             EEEeceeeEEEEEEeCCC
Confidence            468999999999998763

>d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway
species: Streptomyces sp. r1128 [TaxId: 140437]

Probab=100.00  E-value=8.9e-33  Score=250.42  Aligned_cols=164  Identities=22%  Similarity=0.229  Sum_probs=148.8

Q ss_pred             eeEEeEEEEecCCccccHHHHHHhcCCCccee--EEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEE
Q 013297            4 NVGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVG   81 (446)
Q Consensus         4 ~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~   81 (446)
                      ..+|.++|.|+|+++++++++++..|.+++|+  ++|+.+|+  ++.++|+..+|+++|++++|+++++++++||+||++
T Consensus         9 ~arI~g~g~ylP~~~v~n~e~~~~~~~~~~~i~~~tGi~~R~--~~~~~e~~~~ma~~Aa~~aL~~a~~~~~dId~li~~   86 (181)
T d1mzja1           9 FSRVLGVGSYRPRREVSNKEVCTWIDSTEEWIETRTGIRSRR--IAEPDETIQVMGVAASRRALEHAGVDPAEIDLVVVS   86 (181)
T ss_dssp             EEEEEEEEEECCSCEEEHHHHTTTSSCCHHHHHHHHCCSEEE--CCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEE
T ss_pred             ccEEEEEEEECCCceecHHHHHHHcCCCHHHHHhccCcceeh--hhccCCcHHHHhHHHHHhhhhhccCChhHCeEEEEe
Confidence            48999999999999999999999999998887  46888877  558999999999999999999999999999999999


Q ss_pred             eccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCcc----CCCCCC
Q 013297           82 SETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY----AEGPAR  157 (446)
Q Consensus        82 T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y----~~~~~~  157 (446)
                      |+++++..|+.+.+||++||.   +++.+||+++||+|++.||++|..|++++..  ++||||++|..+.    .+....
T Consensus        87 s~~~~~~~p~~a~~v~~~l~~---~~~~~~Dv~~~C~g~~~aL~~A~~~i~~~~~--~~~LvV~~e~~s~~~~~~d~~~~  161 (181)
T d1mzja1          87 TMTNFVHTPPLSVAIAHELGA---DNAGGFDLSAACAGFCHALSIAADAVESGGS--RHVLVVATERMTDVIDLADRSLS  161 (181)
T ss_dssp             CSCCCCCSSCHHHHHHHHHTC---TTCEEEEEECGGGHHHHHHHHHHHHHHHSSC--SCEEEEEEEEGGGGSCSSCTTTT
T ss_pred             ccCCccccccHHHHHHHhhcC---CCccceeHHhhhccHHHHHHHHhCHhhcCCC--ceeEEeeeccccccCCCCCcceE
Confidence            999999999999999999984   7899999999999999999999999999955  9999999999842    233345


Q ss_pred             ccccccceeeeeccCCC
Q 013297          158 PTGGAAAVVMLVGPDAP  174 (446)
Q Consensus       158 ~t~GdGAvA~Ll~~~~~  174 (446)
                      ++|||||+|+||++++.
T Consensus       162 ~lfGDGAaA~ll~~~~~  178 (181)
T d1mzja1         162 FLFGDGAGAAVVGPSDV  178 (181)
T ss_dssp             TTBCEEEEEEEEEEESS
T ss_pred             EEeeeeeEEEEEEeCCC
Confidence            78999999999998653

>d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Thermus thermophilus [TaxId: 274]

Probab=99.98  E-value=2.1e-32  Score=246.01  Aligned_cols=162  Identities=19%  Similarity=0.156  Sum_probs=147.0

Q ss_pred             eEEeEEEEecCCccccHHHHHHhcCCCccee--EEeecceEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEe
Q 013297            5 VGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGS   82 (446)
Q Consensus         5 vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Glg~r~~av~~~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T   82 (446)
                      .||.++++|+|+++|+++++++..+.+.+++  ++|+.+|++  ..++|+..+|+++|++++|+++|++|+|||+||++|
T Consensus         1 sgI~~ig~ylP~~~v~n~~~~~~~~~~~~~i~~~~Gi~~R~~--~~~~e~~~~ma~~Aa~~aL~~agi~~~dIdlli~~s   78 (172)
T d1ub7a1           1 SGILALGAYVPERVMTNADFEAYLDTSDEWIVTRTGIKERRV--AAEDEYTSDLAFKAVEDLLRRHPGALEGVDAVIVAT   78 (172)
T ss_dssp             CEEEEEEEECCSEEEEHHHHHTTSSCCHHHHHHHTCCCEEEE--CCTTCCHHHHHHHHHHHHHHHSTTTTTTEEEEEEEC
T ss_pred             CceeEEEEECCCceEcHHHHHHHhCCCHHHHHhccCceeeee--ccccccccHHHHHHHHHHHhhcCcccccceEEEEec
Confidence            3899999999999999999999999988877  478888874  488999999999999999999999999999999999


Q ss_pred             ccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCcc-CCCCC---Cc
Q 013297           83 ETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AEGPA---RP  158 (446)
Q Consensus        83 ~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~~~~---~~  158 (446)
                      +|+++..|+.+.+|+++||.    ++.+||++++|+|++.||++|..|+++|.+  ++||||++|..+. .++.+   .+
T Consensus        79 ~t~~~~~p~~a~~v~~~Lg~----~~~~~di~~~C~g~~~al~~a~~~~~~~~~--~~~Lvv~~e~~S~~~~~~d~~~~~  152 (172)
T d1ub7a1          79 NTPDALFPDTAALVQARFGL----KAFAYDLLAGCPGWIYALAQAHALVEAGLA--QKVLAVGAEALSKIIDWNDRATAV  152 (172)
T ss_dssp             SSCSEEESCHHHHHHHHTTC----CCEEEEEECSTTHHHHHHHHHHHHHHTTSC--SEEEEEEEECGGGTSCTTCHHHHT
T ss_pred             ccccccccchHHHHHHHhcc----CccceeehhccccHHHHHHHHhhhhhcCCc--ceeEEecccccccccCCCCcCeEE
Confidence            99999999999999999984    678999999999999999999999999966  9999999999854 33333   46


Q ss_pred             cccccceeeeeccCCC
Q 013297          159 TGGAAAVVMLVGPDAP  174 (446)
Q Consensus       159 t~GdGAvA~Ll~~~~~  174 (446)
                      +|||||+|+||++++.
T Consensus       153 lfGDgAaA~ll~~~~~  168 (172)
T d1ub7a1         153 LFGDGGGAAVVGKVRE  168 (172)
T ss_dssp             TBCCEEEEEEEECCCT
T ss_pred             EecceeEEEEEEEcCC
Confidence            7999999999999874

>d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Putative polyketide synthase SCO1206
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.94  E-value=6.1e-27  Score=215.01  Aligned_cols=162  Identities=12%  Similarity=0.085  Sum_probs=133.4

Q ss_pred             EEeEEEEecCCccccHHHHHHhcC----CCcc--e---e--EEeecceEEecCCCC---------------CCHHHHHHH
Q 013297            6 GILAMDIYFPPTCVQQEALEAHDG----ASKG--K---Y--TIGLGQECMAFCSEV---------------EDVISMSLT   59 (446)
Q Consensus         6 gI~~i~~y~P~~~v~~~~l~~~~g----~~~~--k---~--~~Glg~r~~av~~~~---------------Ed~~~lA~~   59 (446)
                      .|.++++|+|+++|+|+|+.+...    .++.  +   +  ++||.+|++..++++               |.+.+|+++
T Consensus         2 ~i~~~a~~~P~~~v~n~e~~e~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~~~~~~~~~~~~~~~a~~la~~   81 (200)
T d1u0ma1           2 TLCRPSVSVPEHVITMEETLELARRRHTDHPQLPLALRLIENTGVRTRHIVQPIEDTLEHPGFEDRNKVYEREAKSRVPA   81 (200)
T ss_dssp             EECCCEEECCSEEEEHHHHHHHHHHHHTTCTTHHHHHHHHHHTCCCEEEESSCHHHHTSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             eeccceEECCCeeEcHHHHHHHHHHhCCCchhHHHHHHHHHhCCCCeeeEECChhhhccCCCHHHHHHHHHHHHHHHHHH
Confidence            588899999999999999977542    1221  2   2  369999997632210               358899999


Q ss_pred             HHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeC-CcChhHHHHHHHHHHHHHcCCCCC
Q 013297           60 AVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST-NACYGGTAALFNCVNWVESSSWDG  138 (446)
Q Consensus        60 Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~-~aC~gg~~AL~~A~~~l~sg~~~~  138 (446)
                      |++++|+++|++++|||+||++|+++. ..|+.++.|+++||+  .+++..+|+. +||+|++.||++|.+++++|..  
T Consensus        82 Aa~~aL~~ag~~~~dId~lI~~s~t~~-~~P~~aa~v~~~lg~--~~~~~~~~i~~~gC~g~~~al~~A~~~l~~~~~--  156 (200)
T d1u0ma1          82 VIQRALDDAELLATDIDVIIYVSCTGF-MMPSLTAWLINEMGF--DSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPE--  156 (200)
T ss_dssp             HHHHHHHHHTCCGGGCSEEEEECSSSC-CSSCHHHHHHHHTTC--CTTCEEEEECSCGGGHHHHHHHHHHHHHHHSTT--
T ss_pred             HHHHHHHHcCCChhhhheEEEeccCCC-CcchhHHHHHHHHhc--CCCeeEeccccchhhHHHHHHHHHHHHHHhCCC--
Confidence            999999999999999999999999875 589999999999998  7889999995 7999999999999999999954  


Q ss_pred             CEEEEEEeecCcc-CCC--CC------CccccccceeeeeccC
Q 013297          139 RYGLVVCTDSAVY-AEG--PA------RPTGGAAAVVMLVGPD  172 (446)
Q Consensus       139 ~~aLVVasD~~~y-~~~--~~------~~t~GdGAvA~Ll~~~  172 (446)
                      ++||||++|.++. -+.  ..      ..+|||||+|+||+.+
T Consensus       157 ~~vLvv~~e~~S~~~~~~d~~~~~~~~~~lFgDGAaA~ll~~~  199 (200)
T d1u0ma1         157 ANALIVACEFCSLCYQPTDLGVGSLLCNGLFGDGIAAAVVRGR  199 (200)
T ss_dssp             CEEEEEEEEEGGGGCCTTCCSHHHHHHHHHBCEEEEEEEEETT
T ss_pred             CEEEEEEEeccccccCCCCCChhhhhcccccccccEEEEEecC
Confidence            9999999999842 121  11      2469999999999865

>d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Chalcone synthase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=99.93  E-value=8.6e-27  Score=219.09  Aligned_cols=166  Identities=19%  Similarity=0.274  Sum_probs=134.4

Q ss_pred             eeEEeEEEEecCCccccHHHHHHhcC----CCc--------cee--EEeecceEEecCCC--------------------
Q 013297            4 NVGILAMDIYFPPTCVQQEALEAHDG----ASK--------GKY--TIGLGQECMAFCSE--------------------   49 (446)
Q Consensus         4 ~vgI~~i~~y~P~~~v~~~~l~~~~g----~~~--------~k~--~~Glg~r~~av~~~--------------------   49 (446)
                      ...|.|||+|+|+++|+|+++.++..    .+.        .++  ++|+.+|+...++.                    
T Consensus        16 pa~I~giGt~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (235)
T d1bi5a1          16 PATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTEEILKENPNVCEYMAPSLDARQ   95 (235)
T ss_dssp             CCEEEEEEEECCSCEEESTTHHHHHHHHTTCTTCHHHHHHHHHHHHHSCCCEEECSCCHHHHHTCHHHHSSSCSCHHHHH
T ss_pred             CcEEEEEEEECCCcEEeHHHHHHHHHHhhccccchhhhhhhhhhhcccCCceeEEecChHhhccCcccccccCccHHHHH
Confidence            47899999999999999999987642    111        122  47999998764321                    


Q ss_pred             ---CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeee-CCcChhHHHHHH
Q 013297           50 ---VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDS-TNACYGGTAALF  125 (446)
Q Consensus        50 ---~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di-~~aC~gg~~AL~  125 (446)
                         .|...+|+++|++++|+++|++++|||+||++|+|+++ .|+.++.+++.||+  ..++..+++ ++||+|+++||+
T Consensus        96 ~~~~~~~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~~~-~p~~~a~~~~~l~~--~~~~~~~~~~~~~C~g~~~al~  172 (235)
T d1bi5a1          96 DMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVD-MPGADYQLTKLLGL--RPYVKRYMMYQQGCFAGGTVLR  172 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCC-SSCHHHHHHHHHTC--CTTCEEEEEESCCTTHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCChhHCcEEEEecccCCc-cCccHHHHHHHHhc--CCCceEEeeecCccchHHHHHH
Confidence               14678999999999999999999999999999999866 67888889999887  677776655 689999999999


Q ss_pred             HHHHHHHcCCCCCCEEEEEEeecCccC----CCCC------CccccccceeeeeccCCC
Q 013297          126 NCVNWVESSSWDGRYGLVVCTDSAVYA----EGPA------RPTGGAAAVVMLVGPDAP  174 (446)
Q Consensus       126 ~A~~~l~sg~~~~~~aLVVasD~~~y~----~~~~------~~t~GdGAvA~Ll~~~~~  174 (446)
                      +|..++++|.  .++||||++|.++..    +...      ..+|||||+|+||+.+|.
T Consensus       173 ~A~~~i~~~~--~~~vLvV~~E~~S~~~~~~d~~~~~~~v~~~lFGDGA~A~vl~~~p~  229 (235)
T d1bi5a1         173 LAKDLAENNK--GARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPV  229 (235)
T ss_dssp             HHHHHHHTST--TCEEEEEEEECGGGTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCC
T ss_pred             HHHHHHHcCC--CCeEEEEEeeecceecCCCCCCchhhhcceeeeccceEEEEEecCCC
Confidence            9999999994  499999999998532    2211      136999999999998864

>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Escherichia coli [TaxId: 562]

Probab=99.81  E-value=7.5e-20  Score=158.33  Aligned_cols=114  Identities=19%  Similarity=0.222  Sum_probs=102.9

Q ss_pred             CcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhh
Q 013297          201 YPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEK  280 (446)
Q Consensus       201 ~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  280 (446)
                      +..+||+..++...+.+++++++++++.      +++++|||+|++||++.++++.+.++|                   
T Consensus        30 ~~~m~G~~vf~~av~~~~~~i~~~L~~~------g~~~~dId~~i~Hq~~~~~~~~~~~~l-------------------   84 (143)
T d1hnja2          30 HLTMAGNEVFKVAVTELAHIVDETLAAN------NLDRSQLDWLVPHQANLRIISATAKKL-------------------   84 (143)
T ss_dssp             SCEECHHHHHHHHHHHHHHHHHHHHHHT------TCCGGGCCEEEECCSCHHHHHHHHHHT-------------------
T ss_pred             eEEEEChHHhhhhhhhhhHHHHHHHHHh------hhcccccceEEeccCchHHHHHHHHhC-------------------
Confidence            3458999888888888999999998886      899999999999999999999999988                   


Q ss_pred             cCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccc
Q 013297          281 LGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSG  360 (446)
Q Consensus       281 ~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG  360 (446)
                           +++.++++.         ++                .++||+++||+|++|..++++ +++++||+|+|++||+|
T Consensus        85 -----~l~~~k~~~---------~~----------------~~~GN~~sasip~~L~~~~~~-~~~~~Gd~vll~g~G~G  133 (143)
T d1hnja2          85 -----GMSMDNVVV---------TL----------------DRHGNTSAASVPCALDEAVRD-GRIKPGQLVLLEAFGGG  133 (143)
T ss_dssp             -----TCCGGGBCC---------CH----------------HHHCBCGGGHHHHHHHHHHHT-TCSCTTCEEEEEEEETT
T ss_pred             -----ccchhhhhh---------hh----------------hhhcccccchHHHHHHHHHHh-CCCCCCCEEEEEEEehh
Confidence                 888876653         23                799999999999999999999 88999999999999999


Q ss_pred             cceeeEEEEE
Q 013297          361 LTATMFSLKL  370 (446)
Q Consensus       361 ~~~~~~~l~~  370 (446)
                      ++++++++||
T Consensus       134 ~s~g~~llrw  143 (143)
T d1hnja2         134 FTWGSALVRF  143 (143)
T ss_dssp             TEEEEEEEEC
T ss_pred             hhhEEEEEEC
Confidence            9999999997

>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Thermus thermophilus [TaxId: 274]

Probab=99.81  E-value=7.5e-20  Score=159.43  Aligned_cols=116  Identities=22%  Similarity=0.245  Sum_probs=104.6

Q ss_pred             CcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhh
Q 013297          201 YPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEK  280 (446)
Q Consensus       201 ~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  280 (446)
                      +..+||+..++..++.+++++++++++.      +++++|||+|++||++.++++.+.++|                   
T Consensus        33 ~~~M~G~~vf~~a~~~vp~~i~~~L~~~------g~~~~dId~~i~Hqa~~~~~~~i~~~l-------------------   87 (149)
T d1ub7a2          33 RLYMNGREVFKFAVRVMNTATLEAIEKA------GLTPEDIRLFVPHQANLRIIDAARERL-------------------   87 (149)
T ss_dssp             SCEECHHHHHHHHHHHHHHHHHHHHHHH------TCCGGGCSEEEECCSCHHHHHHHHHTT-------------------
T ss_pred             cEEEccHHHHHHHHHHHHHHHHHHHHhh------ccccccccEEEeeccchHHHHHHHhhc-------------------
Confidence            3458999888888899999999999987      899999999999999999999999888                   


Q ss_pred             cCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccc
Q 013297          281 LGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSG  360 (446)
Q Consensus       281 ~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG  360 (446)
                           +++.++.+.         ++                .++||+++||+|++|..++++ +++.+||+|+|+++|+|
T Consensus        88 -----gi~~~k~~~---------~~----------------~~~Gn~~sasip~~L~~~~~~-~~~~~Gd~vll~g~G~G  136 (149)
T d1ub7a2          88 -----GLPWERVAV---------NV----------------DRYGNTSTASIPLALKEAVDA-GRIREGDHVLLVSFGAG  136 (149)
T ss_dssp             -----TCCGGGBCC---------CH----------------HHHCBCGGGHHHHHHHHHHHH-TSSCTTCEEEEEEEETT
T ss_pred             -----cchhhHHHH---------HH----------------HHhcCCcchhHHHHHHHHHHc-CCCCCCCEEEEEEEchH
Confidence                 888776653         34                799999999999999999999 78999999999999999


Q ss_pred             cceeeEEEEEeC
Q 013297          361 LTATMFSLKLSE  372 (446)
Q Consensus       361 ~~~~~~~l~~~~  372 (446)
                      +++++++++|..
T Consensus       137 ~s~ga~llrw~g  148 (149)
T d1ub7a2         137 LTWAAAVLTWGG  148 (149)
T ss_dssp             TEEEEEEEECCC
T ss_pred             hhhEEEEEEECC
Confidence            999999999964

>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway
species: Streptomyces sp. r1128 [TaxId: 140437]

Probab=99.81  E-value=7.2e-20  Score=160.17  Aligned_cols=118  Identities=19%  Similarity=0.230  Sum_probs=105.0

Q ss_pred             CCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhh
Q 013297          200 EYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKE  279 (446)
Q Consensus       200 ~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  279 (446)
                      .+..+||+..++...+.+++++++++++.      +++.+|||+|++||++.++++.+.++|                  
T Consensus        33 ~~~~m~G~~v~~~av~~vp~~i~~~L~~~------gl~~~dId~~i~Hq~~~~~~~~v~~~l------------------   88 (153)
T d1mzja2          33 PALVMDGKRVFRWAVADVVPAAREALEVA------GLTVGDLVAFVPHQANLRIIDVLVDRL------------------   88 (153)
T ss_dssp             CCEEECHHHHHHHHHHHHHHHHHHHHHTT------TCCGGGCSEEEECCSCHHHHHHHHHHH------------------
T ss_pred             ceEEEcCHHHHHHHHHHHHHHHHHHHHHh------CCCcccCCEEEEcCCcHHHHHHHHHHh------------------
Confidence            34578999888888889999999888876      899999999999999999999999998                  


Q ss_pred             hcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEecc
Q 013297          280 KLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGS  359 (446)
Q Consensus       280 ~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGs  359 (446)
                            +++.++.+.        .++                ++||||+|||+|++|..++++ +++++||+|+|++||+
T Consensus        89 ------gi~~ek~~~--------~~~----------------~~~GNt~Sasip~~L~~~~~~-~~~~~Gd~ill~~fG~  137 (153)
T d1mzja2          89 ------GVPEHVVVS--------RDA----------------EDTGNTSSASVALALDRLVRS-GAVPGGGPALMIGFGA  137 (153)
T ss_dssp             ------TCCTTSEEC--------CTH----------------HHHCBCTTHHHHHHHHHHHHH-TSSCTTCEEEEEEEET
T ss_pred             ------CCCchhcch--------hhh----------------hhcCCcccchHHHHHHHHHHc-CCCCCCCEEEEEEEch
Confidence                  888887542        123                799999999999999999999 7899999999999999


Q ss_pred             ccceeeEEEEEeC
Q 013297          360 GLTATMFSLKLSE  372 (446)
Q Consensus       360 G~~~~~~~l~~~~  372 (446)
                      |++|++.+++|.+
T Consensus       138 G~s~~~~~l~~~~  150 (153)
T d1mzja2         138 GLSYAGQALLLPD  150 (153)
T ss_dssp             TTEEEEEEEECCC
T ss_pred             hhhhhEEEEEecC
Confidence            9999999999976

>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.80  E-value=1.7e-19  Score=156.92  Aligned_cols=116  Identities=18%  Similarity=0.267  Sum_probs=104.5

Q ss_pred             CCcccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhh
Q 013297          200 EYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKE  279 (446)
Q Consensus       200 ~~p~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  279 (446)
                      .|..+||+..++...+.+++++++++++.      +++++|||+|++||++.++++.+.++|                  
T Consensus        33 ~~~~m~G~~Vf~~a~~~v~~~i~~~L~~~------gl~~~dId~~i~Hqa~~~i~~~v~~~l------------------   88 (148)
T d1u6ea2          33 PFVRLEGPAVFRWAAFKMGDVGRRAMDAA------GVRPDQIDVFVPHQANSRINELLVKNL------------------   88 (148)
T ss_dssp             CCEEECHHHHHHHHHHHHHHHHHHHHHHH------TCCGGGCCEEEECCSCHHHHHHHHHHH------------------
T ss_pred             ccEEeecHHHHHHHHHHHHHHHHHHHHHc------CCCcccccEEEeccccHHHHHHHHHhc------------------
Confidence            35678999988888899999999999987      899999999999999999999999998                  


Q ss_pred             hcCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEecc
Q 013297          280 KLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGS  359 (446)
Q Consensus       280 ~~~~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGs  359 (446)
                            |+++++.+.+        .+                +++||+++||+|++|.+++++ +++++|++|+|++||+
T Consensus        89 ------gl~~ek~~~~--------~~----------------~~~GNt~sasip~~L~~a~~~-g~i~~Gd~vll~gfG~  137 (148)
T d1u6ea2          89 ------QLRPDAVVAN--------DI----------------EHTGNTSAASIPLAMAELLTT-GAAKPGDLALLIGYGA  137 (148)
T ss_dssp             ------TCCTTCEECC--------TH----------------HHHCBCGGGHHHHHHHHHHHH-TSSCTTCEEEEEEEET
T ss_pred             ------CCCchhhhhh--------hH----------------HhhCCCccchHHHHHHHHHHc-CCCCCCCEEEEEEEch
Confidence                  8888775421        12                799999999999999999999 8899999999999999


Q ss_pred             ccceeeEEEEE
Q 013297          360 GLTATMFSLKL  370 (446)
Q Consensus       360 G~~~~~~~l~~  370 (446)
                      |++|++.++|+
T Consensus       138 G~s~~a~llrv  148 (148)
T d1u6ea2         138 GLSYAAQVVRM  148 (148)
T ss_dssp             TTEEEEEEEEC
T ss_pred             hhhheEEEEeC
Confidence            99999999985

>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Putative polyketide synthase SCO1206
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.70  E-value=2.6e-17  Score=142.90  Aligned_cols=106  Identities=21%  Similarity=0.281  Sum_probs=90.6

Q ss_pred             HHHHHHHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccc
Q 013297          214 LMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESY  293 (446)
Q Consensus       214 l~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~  293 (446)
                      ++.+..++++++++.      +++++|||+|++||++.++++.+.++|                        +++.++..
T Consensus        42 i~~~~~~i~~~l~~~------g~~~~did~~~~Hq~~~~i~~~i~~~L------------------------gl~~~k~~   91 (148)
T d1u0ma2          42 MEPLAPALKELAGEH------GWDASDLDFYIVHAGGPRILDDLSTFL------------------------EVDPHAFR   91 (148)
T ss_dssp             HHHHHHHHHHHHHTT------SCCSSCCSCCEEECSHHHHHHHHHHHS------------------------CSCGGGGH
T ss_pred             HHHHHHHHHHHHHHh------CCCHHHCCEEEECCCCHHHHHHHHHHh------------------------CCChhhhh
Confidence            455666677777665      899999999999999999999999988                        88887643


Q ss_pred             cchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEeccccceeeEEEEEeC
Q 013297          294 QSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSE  372 (446)
Q Consensus       294 ~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~syGsG~~~~~~~l~~~~  372 (446)
                      .      ...++                +++|||++||+|++|..++++ +++++||+|+|++||+|+++++++++|+.
T Consensus        92 ~------s~~~l----------------~~~GN~~sasi~~~L~~~~~~-~~~~~Gd~ill~gfG~G~s~~~~llrW~~  147 (148)
T d1u0ma2          92 F------SRATL----------------TEYGNIASAVVLDALRRLFDE-GGVEEGARGLLAGFGPGITAEMSLGCWQT  147 (148)
T ss_dssp             H------HHHHH----------------HHTCBCTTHHHHHHHHHHHHS-CCCCSSCCCEEEEEETTTEEEEEEEEEEC
T ss_pred             H------HHHHH----------------HhcCCCCcchHHHHHHHHHHc-CCCCCCCEEEEEEEchHhEeeEEEEEEcc
Confidence            1      11233                899999999999999999998 78899999999999999999999999974

>d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Pyrone synthase (PyS, chalcone synthase 2)
species: Gerbera hybrid cultivar [TaxId: 18101]

Probab=99.55  E-value=2.3e-15  Score=131.77  Aligned_cols=117  Identities=15%  Similarity=0.164  Sum_probs=93.2

Q ss_pred             ccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcC
Q 013297          203 VVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLG  282 (446)
Q Consensus       203 ~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  282 (446)
                      .+.++.....-.+.++++++.++++.      +++.+|+|+|++||++.+|++.+.++|                     
T Consensus        35 ~~l~r~Vp~~~~~~v~~~v~~~l~~~------gl~~~di~~~v~Hqgg~~Ild~i~~~L---------------------   87 (160)
T d1ee0a2          35 FQLHRDVPLMVAKNIENAAEKALSPL------GITDWNSVFWMVHPGGRAILDQVERKL---------------------   87 (160)
T ss_dssp             CEECTTHHHHHHHHHHHHHHHHHGGG------TCCCGGGSEEEECCSSHHHHHHHHHHT---------------------
T ss_pred             EeeCchhHHHHHHHHHHHHHHHHhhc------cCCccccceEeecCCcHHHHHHHHHHc---------------------
Confidence            34566666666678888888888775      799999999999999999999999998                     


Q ss_pred             CCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhc---CCCC---CCCEEEEEE
Q 013297          283 PFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNK---HSEL---DGKRVVLFS  356 (446)
Q Consensus       283 ~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~---~~~~---~G~~vll~s  356 (446)
                         +++.++..                      .|+.+.++||||+|||+++.|..++++.   ++..   .++++++++
T Consensus        88 ---~L~~~~l~----------------------~s~~vl~~yGNtSSaSI~~vL~~~~~~~~~~~~~~~g~~~d~~ll~a  142 (160)
T d1ee0a2          88 ---NLKEDKLR----------------------ASRHVLSEYGNLISACVLFIIDEVRKRSMAEGKSTTGEGLDCGVLFG  142 (160)
T ss_dssp             ---TCCTTTTH----------------------HHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTBTTBSEEEEEE
T ss_pred             ---CCCHHHHH----------------------HHHHHHHHhCCCccchHHHHHHHHHhhhhhcCCCCcCCCcCEEEEEE
Confidence               88877642                      2222238999999999999999988751   2222   237899999


Q ss_pred             eccccceeeEEEEEe
Q 013297          357 YGSGLTATMFSLKLS  371 (446)
Q Consensus       357 yGsG~~~~~~~l~~~  371 (446)
                      ||+|++++++++|-.
T Consensus       143 fG~Glt~~~~llr~~  157 (160)
T d1ee0a2         143 FGPGMTVETVVLRSV  157 (160)
T ss_dssp             EETTTEEEEEEEEEC
T ss_pred             EChHHHHHHHHHeec
Confidence            999999999999864

>d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Dihydropinosylvin synthase
species: Scots pine (Pinus sylvestris) [TaxId: 3349]

Probab=99.55  E-value=9.3e-15  Score=127.50  Aligned_cols=118  Identities=19%  Similarity=0.204  Sum_probs=95.0

Q ss_pred             ccCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcC
Q 013297          203 VVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLG  282 (446)
Q Consensus       203 ~~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  282 (446)
                      .+.|+.....-.+.+++++++++++.      +++.+|+|+|++||++.+|++.+.++|                     
T Consensus        31 ~~l~~~Vp~~v~~~i~~~~~~~l~~~------~~~~~did~~i~Hqgg~~Ild~v~~~L---------------------   83 (156)
T d1u0ua2          31 FQLKGAVPDLISANIENCMVEAFSQF------KISDWNKLFWVVHPGGRAILDRVEAKL---------------------   83 (156)
T ss_dssp             EEECTTHHHHHHHHHHHHHHHHHGGG------TCCCGGGSEEEECCSCHHHHHHHHHHH---------------------
T ss_pred             EEEcchhHHHHHHHHHHHHHHHHHHc------CCChhhCceEeecCCcHHHHHHHHHHh---------------------
Confidence            34566666666678888888888776      789999999999999999999999998                     


Q ss_pred             CCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhc---CCC---CCCCEEEEEE
Q 013297          283 PFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNK---HSE---LDGKRVVLFS  356 (446)
Q Consensus       283 ~~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~---~~~---~~G~~vll~s  356 (446)
                         +++.++...+                      +.+.+++|||+|||+|+.|..++++.   +..   ..|+++++++
T Consensus        84 ---~L~~~k~~~s----------------------~~~l~~~GN~sSasip~~L~~~~~~~~~~~~~~~~~~~~~~~~~g  138 (156)
T d1u0ua2          84 ---NLDPTKLIPT----------------------RHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFG  138 (156)
T ss_dssp             ---TCCTTTTHHH----------------------HHHHHHHCBCGGGHHHHHHHHHHHHHHHHTCSBSBTTBSEEEEEE
T ss_pred             ---CCCcccchhh----------------------HHHHhhcCCCCcccHHHHHHHHHHhhhhccCCCcCCCCCEEEEEE
Confidence               8887765322                      22238999999999999999987651   222   3469999999


Q ss_pred             eccccceeeEEEEEeC
Q 013297          357 YGSGLTATMFSLKLSE  372 (446)
Q Consensus       357 yGsG~~~~~~~l~~~~  372 (446)
                      ||+|++++++++|..+
T Consensus       139 fG~Glt~~~~llr~~~  154 (156)
T d1u0ua2         139 FGPGLTIETVVLKSVP  154 (156)
T ss_dssp             EETTTEEEEEEEEECB
T ss_pred             ECHHHhHHHHHHeeCc
Confidence            9999999999999765

>d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Chalcone synthase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=99.54  E-value=4.3e-15  Score=129.29  Aligned_cols=117  Identities=17%  Similarity=0.166  Sum_probs=92.8

Q ss_pred             cCChhHHHHHHHHHHHHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCC
Q 013297          204 VDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGP  283 (446)
Q Consensus       204 ~dG~~s~~~yl~~l~~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  283 (446)
                      +.++...+...+.+++++++++++.      +++.+|+|+|++||++.++++.+.++|                      
T Consensus        31 ~l~r~Vp~~i~~~i~~~~~~~l~~~------gl~~~di~~~v~Hqgg~~Ild~v~~~L----------------------   82 (154)
T d1bi5a2          31 HLLKDVPGIVSKNITKALVEAFEPL------GISDYNSIFWIAHPGGPAILDQVEQKL----------------------   82 (154)
T ss_dssp             EECSCHHHHHHHHHHHHHHHHHGGG------TCCCTTSSEEEECCSSHHHHHHHHHHH----------------------
T ss_pred             ecccchHHHHHHHHHHHHHHHHHHc------CCCccccceEeeccccHHHHHHHHHHh----------------------
Confidence            3455555555678888888877765      799999999999999999999999999                      


Q ss_pred             CCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhc---CCCCCC---CEEEEEEe
Q 013297          284 FSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNK---HSELDG---KRVVLFSY  357 (446)
Q Consensus       284 ~~g~~~e~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~---~~~~~G---~~vll~sy  357 (446)
                        +++.++...                      |+.+.++||||+|||+++.|..++++.   +....|   +++++++|
T Consensus        83 --~L~~~~~~~----------------------s~~vl~~yGN~SSasi~~vL~~~~~~~~~~~~~~~g~~~~~~~~~aF  138 (154)
T d1bi5a2          83 --ALKPEKMNA----------------------TREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGEGLEWGVLFGF  138 (154)
T ss_dssp             --TCCGGGGHH----------------------HHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEEE
T ss_pred             --CCCHHHHHH----------------------hHHHHHhcCCCCcccHHHHHHHHHHhhhccCCcccCCCcCEEEEEEE
Confidence              888776432                      222338999999999999999988652   223333   88999999


Q ss_pred             ccccceeeEEEEEeC
Q 013297          358 GSGLTATMFSLKLSE  372 (446)
Q Consensus       358 GsG~~~~~~~l~~~~  372 (446)
                      |+|++++++++|..+
T Consensus       139 G~Glt~~~~llr~~~  153 (154)
T d1bi5a2         139 GPGLTIETVVLRSVA  153 (154)
T ss_dssp             ETTTEEEEEEEEECB
T ss_pred             chHHhHHHHHHhcCc
Confidence            999999999998753

>d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thermus thermophilus [TaxId: 274]

Probab=98.86  E-value=1.6e-08  Score=93.84  Aligned_cols=163  Identities=17%  Similarity=0.194  Sum_probs=107.2

Q ss_pred             eeEEeEEEEecCCccccHHHHHHhc--CCC---c-ceeE-EeecceEEecCC-------------CCCCHHHHHHHHHHH
Q 013297            4 NVGILAMDIYFPPTCVQQEALEAHD--GAS---K-GKYT-IGLGQECMAFCS-------------EVEDVISMSLTAVTN   63 (446)
Q Consensus         4 ~vgI~~i~~y~P~~~v~~~~l~~~~--g~~---~-~k~~-~Glg~r~~av~~-------------~~Ed~~~lA~~Aa~~   63 (446)
                      +|-|.|||...|.-. +.+++.+..  |.+   + .++. .+...+.....+             .-....-|+..|+++
T Consensus         3 rVaItG~G~vsp~g~-~~~e~w~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~aa~~   81 (249)
T d1j3na1           3 RVVVTGLGALTPIGV-GQEAFHKAQLAGKSGVRPITRFDASALPVRIAAEVDVDPGAYLDRKELRRLDRFVQYALIAAQL   81 (249)
T ss_dssp             CEEEEEEEEEETTEE-SHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECCCCCGGGTSCHHHHTTSCHHHHHHHHHHHH
T ss_pred             cEEEECCEeECCCcC-CHHHHHHHHHcCCCccccCCccccccCCccccccccccccccccHHHHhhCCHHHHHHHHHHHH
Confidence            599999999999764 666664432  322   1 1110 000000000000             011245679999999


Q ss_pred             HHHHCCCCcCCcc----EEEEEeccCCCC--------------------------CccHHHHHHHHhcccCCCCceeeee
Q 013297           64 LLEKYKIDPKQIG----RLEVGSETVIDK--------------------------SKSIKTFLMQIFEKFGNTDIEGVDS  113 (446)
Q Consensus        64 aL~~agi~~~dId----~li~~T~t~~~~--------------------------~ps~a~~l~~~LGl~g~~~~~~~di  113 (446)
                      +|+++|+++++++    .|+++|..+...                          ...++.+|...+|+.    -+++.+
T Consensus        82 Al~dAGl~~~~~~~~~~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~gl~----Gp~~tv  157 (249)
T d1j3na1          82 ALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFT----GPSSTV  157 (249)
T ss_dssp             HHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCC----SCBCCB
T ss_pred             HHHHcCCChhHcCCccEEEEEEECCCcccccccccccccccCccccChhhhccccchhhhhhhHhhcCCC----CCcccc
Confidence            9999998876543    566777544210                          124667899999983    356788


Q ss_pred             CCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCc-------c------CC-C--C---C--------Ccccccccee
Q 013297          114 TNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-------Y------AE-G--P---A--------RPTGGAAAVV  166 (446)
Q Consensus       114 ~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-------y------~~-~--~---~--------~~t~GdGAvA  166 (446)
                      ..||++++.||.+|..+|++|.+  +.+||.++|...       +      .. .  +   .        ....|+||++
T Consensus       158 ~~aCaSsl~Ai~~A~~~i~~G~~--d~alvgg~d~~~~p~~~~~f~~~~~ls~~~~~p~~~~rPFd~~~dG~v~gEGa~~  235 (249)
T d1j3na1         158 VTACATGADALGSALRMIQLGEA--DLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSRDGFVMGEGAGV  235 (249)
T ss_dssp             CCGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTCCCBCBBCEEEE
T ss_pred             ccccchHHHHHHHHHHHHHcCCC--CeeeecchHhhhCcHHHHHHHhCCcccCCCCCCCCCCCCccCCCCCEeeEeEEEE
Confidence            99999999999999999999988  999999999741       1      00 0  0   1        2347999999


Q ss_pred             eeeccCC
Q 013297          167 MLVGPDA  173 (446)
Q Consensus       167 ~Ll~~~~  173 (446)
                      +||++.+
T Consensus       236 lvLe~~~  242 (249)
T d1j3na1         236 LVLEAYE  242 (249)
T ss_dssp             EEEEEHH
T ss_pred             EEEccHH
Confidence            9998753

>d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoadipyl CoA thiolase
species: Thermus thermophilus [TaxId: 274]

Probab=98.82  E-value=1.2e-08  Score=96.08  Aligned_cols=99  Identities=8%  Similarity=0.117  Sum_probs=86.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCC-CCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHH
Q 013297           49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVID-KSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC  127 (446)
Q Consensus        49 ~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~-~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A  127 (446)
                      .+.++.+|+..|++.+|+++++++++||.||+|+..+.. ....++..+.-..|+  +..++++.|+++|.+++.||..|
T Consensus        20 ~~~~~~dL~~~a~~~al~~~~i~~~~Id~vi~G~v~~~g~~~~n~aR~~al~aGl--p~~vp~~tVn~~CaSg~~Ai~~a   97 (273)
T d1ulqa1          20 ASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGF--PVEVAGCTVNRLCGSGLEAVAQA   97 (273)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTC--CTTCEEEEEECGGGHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCC--CCccceEEEecccchHHHHHHHH
Confidence            367899999999999999999999999999999887643 234566777777787  67899999999999999999999


Q ss_pred             HHHHHcCCCCCCEEEEEEeecCcc
Q 013297          128 VNWVESSSWDGRYGLVVCTDSAVY  151 (446)
Q Consensus       128 ~~~l~sg~~~~~~aLVVasD~~~y  151 (446)
                      ...|++|..  +.+|+++.|..+.
T Consensus        98 ~~~I~~G~~--d~~lagG~EsmS~  119 (273)
T d1ulqa1          98 ARAIWAGEG--KVYIGSGVESMSR  119 (273)
T ss_dssp             HHHHHTTSC--SEEEEEEEEESSS
T ss_pred             HHHHhcCCC--ccceeeeccccch
Confidence            999999976  9999999999853

>d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Biosynthetic thiolase
species: Zoogloea ramigera [TaxId: 350]

Probab=98.81  E-value=1.3e-08  Score=95.57  Aligned_cols=99  Identities=7%  Similarity=0.009  Sum_probs=89.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHH
Q 013297           49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV  128 (446)
Q Consensus        49 ~~Ed~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~  128 (446)
                      .+..+.+|+..+++.+|++++++|++||.|+++...+....+.++..+.-..|+  ...++++.+++.|.+++.|+..|.
T Consensus        23 ~~~~~~dL~~~~~~~~l~~~~i~~~~Id~vi~G~~~~~~~~~n~ar~~al~agl--p~~vpa~tv~~~C~Sg~~Ai~~Aa  100 (268)
T d1m3ka1          23 ANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGV--PQEATAWGMNQLAGSGLRAVALGM  100 (268)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTC--CTTSEEEEEECGGGHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCcEEEEeeccccCcchHHHhHHHHHhCC--cccccceeecccCcccchHHHHHH
Confidence            467899999999999999999999999999999877655566788888888898  668999999999999999999999


Q ss_pred             HHHHcCCCCCCEEEEEEeecCcc
Q 013297          129 NWVESSSWDGRYGLVVCTDSAVY  151 (446)
Q Consensus       129 ~~l~sg~~~~~~aLVVasD~~~y  151 (446)
                      ..|++|..  +.+|+++.|..+.
T Consensus       101 ~~I~~G~~--dvvlagG~EsmS~  121 (268)
T d1m3ka1         101 QQIATGDA--SIIVAGGMESMSM  121 (268)
T ss_dssp             HHHHTTSC--SCEEEEEEEESTT
T ss_pred             HHHhCCCc--eEEeecccccccc
Confidence            99999977  9999999998853

>d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Escherichia coli [TaxId: 562]

Probab=98.71  E-value=2.1e-07  Score=86.01  Aligned_cols=163  Identities=12%  Similarity=0.092  Sum_probs=106.4

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhc--CCCc----cee-EEeecceEEe-cCCC-------------CCCHHHHHHHHH
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHD--GASK----GKY-TIGLGQECMA-FCSE-------------VEDVISMSLTAV   61 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~~----~k~-~~Glg~r~~a-v~~~-------------~Ed~~~lA~~Aa   61 (446)
                      +.|-|.|||...|-- .+.+++.+..  |.+-    ..+ ..++..+... +...             -....-|++.|+
T Consensus         2 rrVaItG~G~vtp~G-~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~l~aa   80 (250)
T d2gfva1           2 RRVVVTGLGMLSPVG-NTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDIISRKEQRKMDAFIQYGIVAG   80 (250)
T ss_dssp             CCEEEEEEEEEBTTB-SSHHHHHHHHHTTCCCEEECCSSCCTTCSCCEEECCTTCCCTTTSCHHHHTTSCHHHHHHHHHH
T ss_pred             CeEEEECCeeECCCc-CCHHHHHHHHHcCCCeeecCCcccccccCCccceecccchhhhhhhhHHHhhcCHHHHHHHHHH
Confidence            579999999999986 4666665543  2211    011 0011111000 1000             012467899999


Q ss_pred             HHHHHHCCCCcCCcc----EEEEEeccCCC-----------------CC--------c-cHHHHHHHHhcccCCCCceee
Q 013297           62 TNLLEKYKIDPKQIG----RLEVGSETVID-----------------KS--------K-SIKTFLMQIFEKFGNTDIEGV  111 (446)
Q Consensus        62 ~~aL~~agi~~~dId----~li~~T~t~~~-----------------~~--------p-s~a~~l~~~LGl~g~~~~~~~  111 (446)
                      +++|+++|+++++.+    .++++|.....                 ..        + .++.+|...||+    +-+++
T Consensus        81 ~~Al~dAg~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl----~Gp~~  156 (250)
T d2gfva1          81 VQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGL----RGPSI  156 (250)
T ss_dssp             HHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHTTC----CSCEE
T ss_pred             HHHHHhcCCCccccCccceEEEEeeccCCcchhhhhHHHHhhccccccccchhhhhhhhHHHHHHHHHhCC----CCCcc
Confidence            999999998765543    35566654211                 01        1 347789999998    34577


Q ss_pred             eeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCc-------c------CC---CC---CC--------ccccccc
Q 013297          112 DSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-------Y------AE---GP---AR--------PTGGAAA  164 (446)
Q Consensus       112 di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-------y------~~---~~---~~--------~t~GdGA  164 (446)
                      .+..+|++++.||..|..+|++|.+  +.+||.++|...       +      ..   .+   .+        ...|+||
T Consensus       157 tv~~aCaSg~~Ai~~A~~~i~~G~~--d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~~rdG~v~gEGa  234 (250)
T d2gfva1         157 SIATAQTSGVHNIGHAARIIAYGDA--DVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGA  234 (250)
T ss_dssp             CCCCGGGHHHHHHHHHHHHHHHTSC--SEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTCCSBCBBCEE
T ss_pred             ccccccchhhhhhHHHHHHHHcCCc--chhhcccchhhcCcHHHHHHHhcccccCCCCCCCCccCCCCCCCCCEeeeeEE
Confidence            8899999999999999999999987  999999999641       1      00   00   12        3589999


Q ss_pred             eeeeeccC
Q 013297          165 VVMLVGPD  172 (446)
Q Consensus       165 vA~Ll~~~  172 (446)
                      +++||++.
T Consensus       235 a~lVLE~~  242 (250)
T d2gfva1         235 GMLVLEEY  242 (250)
T ss_dssp             EEEEEEEH
T ss_pred             EEEEECcH
Confidence            99999864

>d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase)
species: Pseudomonas fragi [TaxId: 296]

Probab=98.61  E-value=9.5e-08  Score=89.25  Aligned_cols=98  Identities=13%  Similarity=0.127  Sum_probs=85.2

Q ss_pred             CCCHHHHHHHHHHHHHHH-CCCCcCCccEEEEEeccCC-CCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHH
Q 013297           50 VEDVISMSLTAVTNLLEK-YKIDPKQIGRLEVGSETVI-DKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC  127 (446)
Q Consensus        50 ~Ed~~~lA~~Aa~~aL~~-agi~~~dId~li~~T~t~~-~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A  127 (446)
                      +..+.+|+..+++.+|++ +|+++++||.||+|...+. .....++..+.-..|+  ...++++.|++.|.+++.|+.+|
T Consensus        27 ~~~~~dL~~~~i~~~l~r~agi~~~~Id~vi~G~v~~~~~~g~n~aR~~al~ag~--p~~vp~~tV~~~C~Sgl~Ai~~a  104 (262)
T d1wdkc1          27 NTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQI--PHTSAAQTVSRLCGSSMSALHTA  104 (262)
T ss_dssp             TCCHHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSS--CTTSEEEEEECGGGHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHhcCCCCHHHeeEEEEEeecccccccccchhhhHhhhhc--ccccchhhccccccHHHHHHHHH
Confidence            567899999999999997 7999999999999988764 3455667766666776  67899999999999999999999


Q ss_pred             HHHHHcCCCCCCEEEEEEeecCcc
Q 013297          128 VNWVESSSWDGRYGLVVCTDSAVY  151 (446)
Q Consensus       128 ~~~l~sg~~~~~~aLVVasD~~~y  151 (446)
                      ...|++|..  +.+|+++.|..+.
T Consensus       105 a~~I~sG~~--dvvlAgGvEsmS~  126 (262)
T d1wdkc1         105 AQAIMTGNG--DVFVVGGVEHMGH  126 (262)
T ss_dssp             HHHHHTTSC--SEEEEEEEEETTT
T ss_pred             HHHHHhhcC--Cceeeeccccccc
Confidence            999999976  9999999998853

>d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Synechocystis sp. [TaxId: 1143]

Probab=98.58  E-value=4.8e-07  Score=83.15  Aligned_cols=163  Identities=12%  Similarity=0.092  Sum_probs=107.2

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhc--CCC---c-ceeE-EeecceEEecCCC--------------CCCHHHHHHHHH
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHD--GAS---K-GKYT-IGLGQECMAFCSE--------------VEDVISMSLTAV   61 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~---~-~k~~-~Glg~r~~av~~~--------------~Ed~~~lA~~Aa   61 (446)
                      ++|-|.|||...|-- .+.+++.+..  |.+   + .++. .+.........+.              ......|+..++
T Consensus         2 ~rVaItG~G~v~p~G-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~~~~~~a~   80 (250)
T d1e5ma1           2 KRVVVTGLGAITPIG-NTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQFLDRKEAKRMDRFCHFAVCAS   80 (250)
T ss_dssp             CCEEEEEEEEEBTTB-SSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCCSCCGGGTSCHHHHHTSCHHHHHHHHHH
T ss_pred             CeEEEECCeeECCCC-CCHHHHHHHHHcCCCeeccCCccccccccccccceeeecccccccchhhhhhcCcHHHHHHHHH
Confidence            579999999999988 4777765543  322   1 1110 0011011010000              122457899999


Q ss_pred             HHHHHHCCCCcCCc----cEEEEEeccCC-----------------CCC---------ccHHHHHHHHhcccCCCCceee
Q 013297           62 TNLLEKYKIDPKQI----GRLEVGSETVI-----------------DKS---------KSIKTFLMQIFEKFGNTDIEGV  111 (446)
Q Consensus        62 ~~aL~~agi~~~dI----d~li~~T~t~~-----------------~~~---------ps~a~~l~~~LGl~g~~~~~~~  111 (446)
                      ..+|+++|++++.+    -.+++++..+.                 ...         -..+..|...||+    .-+++
T Consensus        81 ~~Al~~Agl~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl----~Gp~~  156 (250)
T d1e5ma1          81 QQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGA----KGPNN  156 (250)
T ss_dssp             HHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC----CSCEE
T ss_pred             HHHHHHcCCChHhhcCCcceEEEEEeeccccchhhhhHHHhhcCccccCcccchhhhcchhhhhHHHhccC----CCCCc
Confidence            99999999876544    24566654321                 001         1357788899998    34577


Q ss_pred             eeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecC-c---c---------CC---CC---CC--------ccccccc
Q 013297          112 DSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-V---Y---------AE---GP---AR--------PTGGAAA  164 (446)
Q Consensus       112 di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~-~---y---------~~---~~---~~--------~t~GdGA  164 (446)
                      .+..||++++.||.+|.++|++|.+  +.+||.++|.. .   +         ..   .+   .+        ...|+||
T Consensus       157 tv~~ACsS~l~Ai~~A~~~i~~G~~--d~~lvGg~~~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~~~dG~~~gEGa  234 (250)
T d1e5ma1         157 CTVTACAAGSNAIGDAFRLVQNGYA--KAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRDGFVMGEGS  234 (250)
T ss_dssp             CCCCGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCGGGTCCTTBTTCCSBCBBCEE
T ss_pred             cccccchhhhhhhHHHhhcccCCcc--cccccccchhhcCcHHHHHHHhcCCccCCCCCCCCccCCCCCCCCCEeeEeeE
Confidence            8899999999999999999999987  99999999964 1   1         00   01   12        3479999


Q ss_pred             eeeeeccC
Q 013297          165 VVMLVGPD  172 (446)
Q Consensus       165 vA~Ll~~~  172 (446)
                      +++||++.
T Consensus       235 ~~~vLe~l  242 (250)
T d1e5ma1         235 GILILEEL  242 (250)
T ss_dssp             EEEEEEEH
T ss_pred             EEEEEeeH
Confidence            99999864

>d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Thiolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.48  E-value=2.7e-07  Score=86.41  Aligned_cols=98  Identities=11%  Similarity=0.120  Sum_probs=83.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHC----CCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeCCcChhHHHHH
Q 013297           49 EVEDVISMSLTAVTNLLEKY----KIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAAL  124 (446)
Q Consensus        49 ~~Ed~~~lA~~Aa~~aL~~a----gi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL  124 (446)
                      .+..+.+|+..+++.+|+++    +++|++||.|++|+..+.-.....+..+.-..|+  +..++++.|+..|.+++.||
T Consensus        31 ~~~~~~~L~~~~i~~~l~r~~~~~~idp~~Id~vi~G~v~~~g~~~~~aR~~al~agl--p~~vpa~tVnr~CaSg~~Ai  108 (269)
T d1afwa1          31 KDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAACLASGI--PYSTPFVALNRQCSSGLTAV  108 (269)
T ss_dssp             TTCCHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTC--CTTSCEEEEECGGGHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHhCCccccCChhhcCEEEeccccccccccccchhhhhhccc--cccccchhccccchHHHHHH
Confidence            46789999999999999876    5999999999999876543334456666666777  67899999999999999999


Q ss_pred             HHHHHHHHcCCCCCCEEEEEEeecCc
Q 013297          125 FNCVNWVESSSWDGRYGLVVCTDSAV  150 (446)
Q Consensus       125 ~~A~~~l~sg~~~~~~aLVVasD~~~  150 (446)
                      ..|...|++|..  +.+|+++.|..+
T Consensus       109 ~~Aa~~I~~G~~--divlagG~EsmS  132 (269)
T d1afwa1         109 NDIANKIKVGQI--DIGLALGVESMT  132 (269)
T ss_dssp             HHHHHHHHTTSC--SEEEEEEEEEHH
T ss_pred             HHHHHHHhhccc--cceeeeeccccc
Confidence            999999999976  999999999874

>d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA
species: Streptomyces coelicolor [TaxId: 1902]

Probab=97.99  E-value=9.2e-06  Score=72.66  Aligned_cols=140  Identities=13%  Similarity=0.157  Sum_probs=92.8

Q ss_pred             ceeEEeEEEEecCCccccHHHHHHhc--CCC---------cceeEEeecce------EEecCC----CCCCHHHHHHHHH
Q 013297            3 KNVGILAMDIYFPPTCVQQEALEAHD--GAS---------KGKYTIGLGQE------CMAFCS----EVEDVISMSLTAV   61 (446)
Q Consensus         3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~---------~~k~~~Glg~r------~~av~~----~~Ed~~~lA~~Aa   61 (446)
                      +.|-|.|||..+|--. +.+++.+..  |.+         ++.+..++...      ...+.+    .-.....|++.|+
T Consensus         1 rRVvItG~G~v~p~G~-~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa   79 (216)
T d1tqya1           1 RRVVITGVGVRAPGGN-GTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEADFDPVAEGFGPRELDRMDRASQFAVACA   79 (216)
T ss_dssp             CCEEEEEEEEEETTEE-SHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECCCCCHHHHTCCHHHHHHSCHHHHHHHHHH
T ss_pred             CeEEEEeceeECCCCC-CHHHHHHHHHcCCCEeecCCccCCCcccccccccccccccccccChhhhcccCcchhhHHHHH
Confidence            4688999999999874 666664442  332         11111111100      000000    0123678999999


Q ss_pred             HHHHHHCCCCcCCcc----EEEEEeccCCC---------------------------CC----c-cHHHHHHHHhcccCC
Q 013297           62 TNLLEKYKIDPKQIG----RLEVGSETVID---------------------------KS----K-SIKTFLMQIFEKFGN  105 (446)
Q Consensus        62 ~~aL~~agi~~~dId----~li~~T~t~~~---------------------------~~----p-s~a~~l~~~LGl~g~  105 (446)
                      ++||+++|+++++++    .++++++.+..                           ..    | .++..+...+|+   
T Consensus        80 ~~Al~dAg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g~---  156 (216)
T d1tqya1          80 REAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGA---  156 (216)
T ss_dssp             HHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHHHHHHTC---
T ss_pred             HHHHHHhcCCccccccccccccccccccccchhhHHHhhhhhcccccccchhhcccccccccCchHHHHHHHHhcCc---
Confidence            999999999876543    24444433210                           00    1 246789999997   


Q ss_pred             CCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecC
Q 013297          106 TDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA  149 (446)
Q Consensus       106 ~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~  149 (446)
                       .-+.+.+..||++++.||..|..+|++|.+  +.+||.++|..
T Consensus       157 -~Gp~~tv~~ACaS~~~Ai~~A~~~i~~G~~--d~~ivGG~d~~  197 (216)
T d1tqya1         157 -EGPVTMVSTGCTSGLDSVGNAVRAIEEGSA--DVMFAGAADTP  197 (216)
T ss_dssp             -CSCEEEECCGGGHHHHHHHHHHHHHHHTSC--SEEEEEEEECC
T ss_pred             -cccceeeccccchHHHHHHHHHHHHHcCCC--CEEEEeeeccc
Confidence             345688899999999999999999999988  99999999964

>d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB
species: Streptomyces coelicolor [TaxId: 1902]

Probab=97.90  E-value=2.5e-05  Score=69.28  Aligned_cols=90  Identities=16%  Similarity=-0.033  Sum_probs=71.0

Q ss_pred             HHHHHHHHHHHHHHHCCCCcCCcc----EEEEEeccCCC-----------------C--------Cc-cHHHHHHHHhcc
Q 013297           53 VISMSLTAVTNLLEKYKIDPKQIG----RLEVGSETVID-----------------K--------SK-SIKTFLMQIFEK  102 (446)
Q Consensus        53 ~~~lA~~Aa~~aL~~agi~~~dId----~li~~T~t~~~-----------------~--------~p-s~a~~l~~~LGl  102 (446)
                      ...|+..|+.++|+++|+++++++    .+++++..+..                 .        .+ ..+.+|...||+
T Consensus        70 ~~~~~~~a~~~Al~~Ag~~~~~~~~~~~g~~~g~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl  149 (208)
T d1tqyb1          70 STRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGM  149 (208)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTC
T ss_pred             ccccccccccccchhhhcccccccccccccccccccccccccchhhhhhccccccccccccccccccccccchhhhcccc
Confidence            466999999999999999877764    46667654310                 0        11 347789999998


Q ss_pred             cCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecC
Q 013297          103 FGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA  149 (446)
Q Consensus       103 ~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~  149 (446)
                      .    -+.+.+..||++++.||..|.++|++| +  +.+||.++|..
T Consensus       150 ~----Gp~~tv~tACaS~l~Ai~~A~~~I~~G-~--d~~lvGG~d~~  189 (208)
T d1tqyb1         150 R----GPSSALVAEQAGGLDALGHARRTIRRG-T--PLVVSGGVDSA  189 (208)
T ss_dssp             C----SSCEEEECGGGHHHHHHHHHHHHHHHT-C--SEEEEEEEECC
T ss_pred             c----ceeeeccccccHHHHHHHHHHHHHHcC-C--CEEEECccccc
Confidence            3    356778999999999999999999999 7  89999999963

>d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]

Probab=97.87  E-value=1.9e-05  Score=72.55  Aligned_cols=76  Identities=9%  Similarity=0.055  Sum_probs=60.5

Q ss_pred             HHHHHHHHhcccCCCCceeeeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCcc-------------CC----C
Q 013297           92 IKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-------------AE----G  154 (446)
Q Consensus        92 ~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-------------~~----~  154 (446)
                      ++.+|...||+    +-+.+.+..||++++.||..|..+|++|.+  +.+||.++|....             ..    .
T Consensus       158 ~a~~is~~~~l----~Gp~~~v~~aCaSsl~Ai~~A~~~l~~G~~--d~aivgg~~~~~~p~~~~~~~~~~~ls~~~~~~  231 (270)
T d2ix4a1         158 ASGHVSMKYGF----QGPNHAAVTACATGAHSIGDATRMIQFGDA--DVMVAGGTESSIDALSVAGFSRSRALSTKFNSS  231 (270)
T ss_dssp             HHHHHHHHHTC----CSCEECBCCGGGHHHHHHHHHHHHHHHTSC--SEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTC
T ss_pred             hHHHHHHHhCC----CCCCcccccccchhhHHHHHHHHHHHcCCC--CeeccccchhhhhhhhHHHHHhcccccCCCCCC
Confidence            57889999998    335678899999999999999999999988  9999999997511             00    0


Q ss_pred             ---C--------CCccccccceeeeeccCC
Q 013297          155 ---P--------ARPTGGAAAVVMLVGPDA  173 (446)
Q Consensus       155 ---~--------~~~t~GdGAvA~Ll~~~~  173 (446)
                         .        +....|+||+++||++.+
T Consensus       232 p~~~~rPFD~~a~G~v~gEGaa~~vLe~l~  261 (270)
T d2ix4a1         232 PQEASRPFDCDRDGFVIGEGSGVIVLEEYE  261 (270)
T ss_dssp             GGGSCCTTBTTCCSBCBBCEEEEEEEEEHH
T ss_pred             CCCccCCCCCCCCCEeeEeeEEEEEEeeHH
Confidence               0        123589999999998753

>d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase I
species: Escherichia coli [TaxId: 562]

Probab=97.72  E-value=5e-05  Score=69.27  Aligned_cols=161  Identities=13%  Similarity=0.134  Sum_probs=101.2

Q ss_pred             eeEEeEEEEecCCccccHHHHHHhc--CCCc----cee-EEeecceEEe----cCCC---------CCCHHHHHHHHHHH
Q 013297            4 NVGILAMDIYFPPTCVQQEALEAHD--GASK----GKY-TIGLGQECMA----FCSE---------VEDVISMSLTAVTN   63 (446)
Q Consensus         4 ~vgI~~i~~y~P~~~v~~~~l~~~~--g~~~----~k~-~~Glg~r~~a----v~~~---------~Ed~~~lA~~Aa~~   63 (446)
                      .|-|.|||...|--. +.+++.+..  |.+-    .++ ..+.......    ....         .....-+...++..
T Consensus         3 RVvITG~G~i~p~G~-~~~~~w~~L~~G~sgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (253)
T d2vbaa1           3 RAVITGLGIVSSIGN-NQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVKLDTTGLIDRKVVRFMSDASIYAFLSMEQ   81 (253)
T ss_dssp             CEEEEEEEEEBTTBS-SHHHHHHHHHHTCCCEEECHHHHHTTCSCCEEECCCCCCTTSSCHHHHTTCCHHHHHHHHHHHH
T ss_pred             cEEEEccEEECCCCC-CHHHHHHHHHcCCCccccCCccccccCcccccccccccccccccchhhccchhhhhhhhHHHHH
Confidence            599999999999875 555544432  3321    011 0011110000    0011         12345588899999


Q ss_pred             HHHHCCCCc------CCccEEEEEeccCC-------------CC--------------CccHHHHHHHHhcccCCCCcee
Q 013297           64 LLEKYKIDP------KQIGRLEVGSETVI-------------DK--------------SKSIKTFLMQIFEKFGNTDIEG  110 (446)
Q Consensus        64 aL~~agi~~------~dId~li~~T~t~~-------------~~--------------~ps~a~~l~~~LGl~g~~~~~~  110 (446)
                      ++.++++..      +++ .+++++..+.             ..              .-..+..|...+|+    .-+.
T Consensus        82 a~~~~~l~~~~~~~~~r~-g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g~----~Gp~  156 (253)
T d2vbaa1          82 AIADAGLSPEAYQNNPRV-GLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKI----HGVN  156 (253)
T ss_dssp             HHHHHTCCHHHHTTCTTE-EEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTTTC----CSCE
T ss_pred             HHHHhhccchhccCCCCE-EEEeccccccccccccccccccccCCccccCchhhhccccccccceeccccCc----ccce
Confidence            999988753      334 3445554331             00              11356678888887    3456


Q ss_pred             eeeCCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeecCc------c----------CCCC---CC--------cccccc
Q 013297          111 VDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV------Y----------AEGP---AR--------PTGGAA  163 (446)
Q Consensus       111 ~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~------y----------~~~~---~~--------~t~GdG  163 (446)
                      +.+..||++++.||..|..+|++|.+  +.+||.++|...      +          ...|   .+        ...|+|
T Consensus       157 ~~i~taCaSsl~Ai~~A~~~i~~G~~--d~alvgg~~~~~~~~~~~~~~~~~ls~~~~~~P~~~~rPFD~~~~G~v~gEG  234 (253)
T d2vbaa1         157 YSISSACATSAHCIGNAVEQIQLGKQ--DIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGG  234 (253)
T ss_dssp             EEEECGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEECCCHHHHHHHHHTTCBCCSCTTSGGGSCCTTBTTCCSBCBBCE
T ss_pred             eeeeccchhHHHHHHHHHHhcchhcc--ceeeecchhhhhcchhhhHHHHHHHhcCCCCCCCCCCCCCCCCCCCEeeeeE
Confidence            77889999999999999999999987  899999999751      1          0001   12        358999


Q ss_pred             ceeeeeccC
Q 013297          164 AVVMLVGPD  172 (446)
Q Consensus       164 AvA~Ll~~~  172 (446)
                      |+++||++-
T Consensus       235 a~~lvLe~l  243 (253)
T d2vbaa1         235 GGMVVVEEL  243 (253)
T ss_dssp             EEEEEEEEH
T ss_pred             EEEEEEccH
Confidence            999999864

>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway
species: Streptomyces sp. r1128 [TaxId: 140437]

Probab=95.97  E-value=0.028  Score=46.74  Aligned_cols=98  Identities=18%  Similarity=0.136  Sum_probs=61.6

Q ss_pred             HHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCce-eeeeC--CcChhHHHHHHHHHHH
Q 013297           54 ISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIE-GVDST--NACYGGTAALFNCVNW  130 (446)
Q Consensus        54 ~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~-~~di~--~aC~gg~~AL~~A~~~  130 (446)
                      +....++++++|+++|++++|||.+++...     .+.+-..+++.||+  +.+-. ...+.  ..|++...-+. -..+
T Consensus        47 v~~vp~~i~~~L~~~gl~~~dId~~i~Hq~-----~~~~~~~v~~~lgi--~~ek~~~~~~~~~GNt~Sasip~~-L~~~  118 (153)
T d1mzja2          47 VADVVPAAREALEVAGLTVGDLVAFVPHQA-----NLRIIDVLVDRLGV--PEHVVVSRDAEDTGNTSSASVALA-LDRL  118 (153)
T ss_dssp             HHHHHHHHHHHHHTTTCCGGGCSEEEECCS-----CHHHHHHHHHHHTC--CTTSEECCTHHHHCBCTTHHHHHH-HHHH
T ss_pred             HHHHHHHHHHHHHHhCCCcccCCEEEEcCC-----cHHHHHHHHHHhCC--CchhcchhhhhhcCCcccchHHHH-HHHH
Confidence            455566889999999999999999986432     34567788999998  44332 22232  23444432222 2334


Q ss_pred             HHcCC-CCCCEEEEEEeecCccCCCCCCcccccc---ceeeeeccCC
Q 013297          131 VESSS-WDGRYGLVVCTDSAVYAEGPARPTGGAA---AVVMLVGPDA  173 (446)
Q Consensus       131 l~sg~-~~~~~aLVVasD~~~y~~~~~~~t~GdG---AvA~Ll~~~~  173 (446)
                      ++.+. .+|+++|+++              ||.|   ++|+|.-+.+
T Consensus       119 ~~~~~~~~Gd~ill~~--------------fG~G~s~~~~~l~~~~~  151 (153)
T d1mzja2         119 VRSGAVPGGGPALMIG--------------FGAGLSYAGQALLLPDP  151 (153)
T ss_dssp             HHHTSSCTTCEEEEEE--------------EETTTEEEEEEEECCCC
T ss_pred             HHcCCCCCCCEEEEEE--------------EchhhhhhEEEEEecCC
Confidence            45543 3678998887              6777   4555555543

>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Thermus thermophilus [TaxId: 274]

Probab=95.80  E-value=0.018  Score=47.73  Aligned_cols=84  Identities=15%  Similarity=0.101  Sum_probs=53.3

Q ss_pred             HHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeeeC--CcChhHHHHHHHHHHHH
Q 013297           54 ISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST--NACYGGTAALFNCVNWV  131 (446)
Q Consensus        54 ~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di~--~aC~gg~~AL~~A~~~l  131 (446)
                      +....++++++|+++|++++|||.++...     ..+..-..+.++||+  .++-....+.  ..|.+...-+. -...+
T Consensus        46 ~~~vp~~i~~~L~~~g~~~~dId~~i~Hq-----a~~~~~~~i~~~lgi--~~~k~~~~~~~~Gn~~sasip~~-L~~~~  117 (149)
T d1ub7a2          46 VRVMNTATLEAIEKAGLTPEDIRLFVPHQ-----ANLRIIDAARERLGL--PWERVAVNVDRYGNTSTASIPLA-LKEAV  117 (149)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGCSEEEECC-----SCHHHHHHHHHTTTC--CGGGBCCCHHHHCBCGGGHHHHH-HHHHH
T ss_pred             HHHHHHHHHHHHHhhccccccccEEEeec-----cchHHHHHHHhhccc--hhhHHHHHHHHhcCCcchhHHHH-HHHHH
Confidence            44556788999999999999999998642     344566788899997  3333222332  23333332222 23444


Q ss_pred             HcCC-CCCCEEEEEE
Q 013297          132 ESSS-WDGRYGLVVC  145 (446)
Q Consensus       132 ~sg~-~~~~~aLVVa  145 (446)
                      +.+. .||+++|+++
T Consensus       118 ~~~~~~~Gd~vll~g  132 (149)
T d1ub7a2         118 DAGRIREGDHVLLVS  132 (149)
T ss_dssp             HHTSSCTTCEEEEEE
T ss_pred             HcCCCCCCCEEEEEE
Confidence            5543 3788999987

>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.22  E-value=0.065  Score=44.11  Aligned_cols=83  Identities=12%  Similarity=0.105  Sum_probs=54.5

Q ss_pred             HHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeee-e---CC-cChhHHHHHHHH
Q 013297           53 VISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVD-S---TN-ACYGGTAALFNC  127 (446)
Q Consensus        53 ~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~d-i---~~-aC~gg~~AL~~A  127 (446)
                      ++....++++++|+++|++++|||.+++..     ..+.+-..+++.||+  +++-.... +   +| ++++-..+|..+
T Consensus        46 a~~~v~~~i~~~L~~~gl~~~dId~~i~Hq-----a~~~i~~~v~~~lgl--~~ek~~~~~~~~~GNt~sasip~~L~~a  118 (148)
T d1u6ea2          46 AAFKMGDVGRRAMDAAGVRPDQIDVFVPHQ-----ANSRINELLVKNLQL--RPDAVVANDIEHTGNTSAASIPLAMAEL  118 (148)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGCCEEEECC-----SCHHHHHHHHHHHTC--CTTCEECCTHHHHCBCGGGHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCcccccEEEecc-----ccHHHHHHHHHhcCC--CchhhhhhhHHhhCCCccchHHHHHHHH
Confidence            455567789999999999999999998643     234566789999998  44332322 2   22 333344455544


Q ss_pred             HHHHHcCC-CCCCEEEEEE
Q 013297          128 VNWVESSS-WDGRYGLVVC  145 (446)
Q Consensus       128 ~~~l~sg~-~~~~~aLVVa  145 (446)
                         ++.+. .+|+++|+++
T Consensus       119 ---~~~g~i~~Gd~vll~g  134 (148)
T d1u6ea2         119 ---LTTGAAKPGDLALLIG  134 (148)
T ss_dssp             ---HHHTSSCTTCEEEEEE
T ss_pred             ---HHcCCCCCCCEEEEEE
Confidence               44443 2678888876

>d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB
species: Streptomyces coelicolor [TaxId: 1902]

Probab=94.80  E-value=0.16  Score=43.61  Aligned_cols=35  Identities=9%  Similarity=-0.050  Sum_probs=26.9

Q ss_pred             HHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHH
Q 013297          220 CYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFAR  260 (446)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~  260 (446)
                      +++..+++.      ++.++||+++..|..+++..+.+-.+
T Consensus        67 ~i~~aL~~a------~i~~~di~~v~ahgtGt~~~D~~E~~  101 (194)
T d1tqyb2          67 AIRLALNDA------GTGPEDVDVVFADGAGVPELDAAEAR  101 (194)
T ss_dssp             HHHHHHHHH------TCCGGGCCEEECCCCCSHHHHHHHHH
T ss_pred             hhhhhcccc------cccccceeeeeccccCcccccHHHhh
Confidence            444555555      78999999999999999988875443

>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Escherichia coli [TaxId: 562]

Probab=92.99  E-value=0.17  Score=41.15  Aligned_cols=82  Identities=16%  Similarity=0.078  Sum_probs=53.6

Q ss_pred             HHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccCCCCceeeee---C-CcChhHHHHHHHHHH
Q 013297           54 ISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDS---T-NACYGGTAALFNCVN  129 (446)
Q Consensus        54 ~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g~~~~~~~di---~-~aC~gg~~AL~~A~~  129 (446)
                      +....++++++|+++|++++|||.++....     .+.+-..+++.||+  ..+-....+   + .++++...+|..+. 
T Consensus        43 v~~~~~~i~~~L~~~g~~~~dId~~i~Hq~-----~~~~~~~~~~~l~l--~~~k~~~~~~~~GN~~sasip~~L~~~~-  114 (143)
T d1hnja2          43 VTELAHIVDETLAANNLDRSQLDWLVPHQA-----NLRIISATAKKLGM--SMDNVVVTLDRHGNTSAASVPCALDEAV-  114 (143)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCCEEEECCS-----CHHHHHHHHHHTTC--CGGGBCCCHHHHCBCGGGHHHHHHHHHH-
T ss_pred             hhhhhHHHHHHHHHhhhcccccceEEeccC-----chHHHHHHHHhCcc--chhhhhhhhhhhcccccchHHHHHHHHH-
Confidence            455567899999999999999999986432     34566778999997  332222222   2 24455555555543 


Q ss_pred             HHHcCC-CCCCEEEEEE
Q 013297          130 WVESSS-WDGRYGLVVC  145 (446)
Q Consensus       130 ~l~sg~-~~~~~aLVVa  145 (446)
                        +.+. .+|+++|+++
T Consensus       115 --~~~~~~~Gd~vll~g  129 (143)
T d1hnja2         115 --RDGRIKPGQLVLLEA  129 (143)
T ss_dssp             --HTTCSCTTCEEEEEE
T ss_pred             --HhCCCCCCCEEEEEE
Confidence              3442 2778998877

>d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Biosynthetic thiolase
species: Zoogloea ramigera [TaxId: 350]

Probab=92.63  E-value=0.35  Score=38.27  Aligned_cols=95  Identities=14%  Similarity=0.077  Sum_probs=63.2

Q ss_pred             HHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccC---CCCceeeeeC--CcChhHHHHHHHHHHHH
Q 013297           57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFG---NTDIEGVDST--NACYGGTAALFNCVNWV  131 (446)
Q Consensus        57 A~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g---~~~~~~~di~--~aC~gg~~AL~~A~~~l  131 (446)
                      -+.|++++|+++|++.+|||.+.+.- .    .-+.+-..++.||+.-   |.+--++-++  .||+|.-..+.++..+-
T Consensus        24 Pv~A~~~lL~r~gl~~~Did~~EinE-A----FA~q~la~~~~l~id~~kvN~~GGaiAlGHP~GaSGarl~~tl~~~L~   98 (124)
T d1m3ka2          24 PIPASRKALERAGWKIGDLDLVEANE-A----FAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMK   98 (124)
T ss_dssp             HHHHHHHHHHHHTCCGGGCSEEEECC-S----BHHHHHHHHHHHCCCGGGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHcCCChhcccHHHhcc-c----chhheeeehHhhCCChhhcCCCCCccccccCcCccchhHHHHHHHHHH
Confidence            45789999999999999999998621 1    2234456788888610   1122233333  58898888888888877


Q ss_pred             HcCCCCCCEEEEEEeecCccCCCCCCccccccceeeeecc
Q 013297          132 ESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGP  171 (446)
Q Consensus       132 ~sg~~~~~~aLVVasD~~~y~~~~~~~t~GdGAvA~Ll~~  171 (446)
                      +.+   +++.|+-.+            ..|..++||+|++
T Consensus        99 ~~~---~~~Glas~C------------~gGG~g~A~liE~  123 (124)
T d1m3ka2          99 RRG---ARKGLATLC------------IGGGMGVAMCIES  123 (124)
T ss_dssp             HHT---CSEEEEEEE------------ETTTEEEEEEEEC
T ss_pred             hcC---CCEEEEEec------------ccccceeEEEEEe
Confidence            654   367766432            2466667888864

>d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA
species: Streptomyces coelicolor [TaxId: 1902]

Probab=92.62  E-value=0.89  Score=38.88  Aligned_cols=89  Identities=9%  Similarity=0.116  Sum_probs=49.3

Q ss_pred             cCCCCCCccccccceeeeeccCCCc-----ccccccccccccccccccccCCCCCCcccCChhHHHHHHHHHHHHHHHHH
Q 013297          151 YAEGPARPTGGAAAVVMLVGPDAPV-----AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLC  225 (446)
Q Consensus       151 y~~~~~~~t~GdGAvA~Ll~~~~~~-----~~~~~~~g~~~~~~~df~~p~~~~~~p~~dG~~s~~~yl~~l~~~~~~~~  225 (446)
                      |+...+....|+|++++||.+....     .+...+.|+.+.  .|-....    .+..++.-        ..++++..+
T Consensus        10 FD~~adG~v~gEGa~~~vL~~~~~A~~~g~~i~a~i~g~~~~--~dg~~~~----~~~~~~~~--------~~~~~~~al   75 (205)
T d1tqya2          10 FDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATR--CNAYHMT----GLKADGRE--------MAETIRVAL   75 (205)
T ss_dssp             TBTTCCCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEE--ECSSCSS----CCCTTCHH--------HHHHHHHHH
T ss_pred             ccCCCCCEeeEeeEEEEEEeEHHHHHHCCCceEEEEEeeEcc--ccccccC----cccccccc--------cchhhhhHH
Confidence            3444456778999999999864320     111112332221  1111111    11123321        223444445


Q ss_pred             HHhhhhhCCCCCcCCCceeeccCcchHHHHHHHH
Q 013297          226 SKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFA  259 (446)
Q Consensus       226 ~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~  259 (446)
                      ++.      ++.++||+++-.|....++.+.+-.
T Consensus        76 ~~a------~i~~~~i~~ie~hgtGt~~~D~~E~  103 (205)
T d1tqya2          76 DES------RTDATDIDYINAHGSGTRQNDRHET  103 (205)
T ss_dssp             HHH------TCCGGGCCEEECCCCCCHHHHHHHH
T ss_pred             hhh------cCCccceeeeeccccccccCchhHH
Confidence            554      7899999999999999998886543

>d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase)
species: Pseudomonas fragi [TaxId: 296]

Probab=89.93  E-value=0.49  Score=37.62  Aligned_cols=95  Identities=13%  Similarity=0.155  Sum_probs=58.6

Q ss_pred             HHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccC------CCCceeeeeC--CcChhHHHHHHHHH
Q 013297           57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFG------NTDIEGVDST--NACYGGTAALFNCV  128 (446)
Q Consensus        57 A~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g------~~~~~~~di~--~aC~gg~~AL~~A~  128 (446)
                      .+.|++++|+++|++.+|||.+... |.    ..+.+-.+++.++..+      |.+--++-++  .||+|.-..+.++.
T Consensus        25 p~~A~~klL~ragl~~~did~~Ein-EA----FA~q~l~~~~~~~~~~~~~ekvN~~GGaiAlGHP~GASGaRlv~~l~~   99 (128)
T d1wdkc2          25 PVPATQKALKRAGLNMADIDFIELN-EA----FAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLN   99 (128)
T ss_dssp             HHHHHHHHHHHHTCCGGGCCEEEEC-CS----BHHHHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHhhhcCccccccceEEee-cc----cchhhhhhhhhcccccCCcceecCCCCcccccccccccchhHHHHHHH
Confidence            4578999999999999999999862 11    1122333344433210      2222233333  47888877777777


Q ss_pred             HHHHcCCCCCCEEEEEEeecCccCCCCCCccccccceeeeecc
Q 013297          129 NWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGP  171 (446)
Q Consensus       129 ~~l~sg~~~~~~aLVVasD~~~y~~~~~~~t~GdGAvA~Ll~~  171 (446)
                      .+-+.+   +++.++-.+            ..|..++||||++
T Consensus       100 ~L~~~~---~~~Glas~C------------~gGG~g~A~~iEr  127 (128)
T d1wdkc2         100 VMKQNG---GTFGLSTMC------------IGLGQGIATVFER  127 (128)
T ss_dssp             HHHHTT---CSEEEEEEE------------ETTTEEEEEEEEC
T ss_pred             HHHhcC---CCEEEEEec------------ccccceeEEEEEe
Confidence            776644   367765432            2577778888874

>d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thermus thermophilus [TaxId: 274]

Probab=87.94  E-value=2.1  Score=34.74  Aligned_cols=25  Identities=8%  Similarity=0.110  Sum_probs=21.9

Q ss_pred             CCCcCCCceeeccCcchHHHHHHHH
Q 013297          235 QFSLSNADYFVFHSPYNKLVQKSFA  259 (446)
Q Consensus       235 ~~~~~did~~i~H~p~~~~~~~~~~  259 (446)
                      ++.++|||++..|....+..+.+--
T Consensus        40 gi~p~~I~~ie~HgtGT~~gD~~E~   64 (159)
T d1j3na2          40 GIAPEQVGYINAHGTSTPVGDRAEV   64 (159)
T ss_dssp             TCCGGGCCEEECCCCSCHHHHHHHH
T ss_pred             CCCHHHcCeEeccccCCccchHHHH
Confidence            7999999999999999998887643

>d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoadipyl CoA thiolase
species: Thermus thermophilus [TaxId: 274]

Probab=86.74  E-value=2.4  Score=33.25  Aligned_cols=95  Identities=13%  Similarity=0.144  Sum_probs=56.9

Q ss_pred             HHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhccc-C----CCCceeeeeC--CcChhHHHHHHHHHH
Q 013297           57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKF-G----NTDIEGVDST--NACYGGTAALFNCVN  129 (446)
Q Consensus        57 A~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~-g----~~~~~~~di~--~aC~gg~~AL~~A~~  129 (446)
                      -+.|++++|+++|++.+|||.+... |.    .-+..-..++.+++. .    |.+--++-++  .||+|.-..+.+...
T Consensus        23 P~~A~~~~L~r~gl~~~Did~~Ein-EA----FAaq~l~~~~~~~l~~d~~kvN~~GGaIAlGHP~GASGari~~tl~~~   97 (125)
T d1ulqa2          23 PVPATRKALERAGLSFSDLGLIELN-EA----FAAQALAVLREWSLSMEDQRLNPNGGAIALGHPLGASGARILTTLVHE   97 (125)
T ss_dssp             HHHHHHHHHHHTTCCGGGCSEEEEC-CS----BHHHHHHHHHHHTCCTTCTTBSTTCCHHHHCCCHHHHHHHHHHHHHHH
T ss_pred             cHHHHHhHhhccCcCccccchheec-cc----cchhHHHHHHHhhccCchhhcCCCCCcccccCCccccchhHHHHHHHH
Confidence            4689999999999999999999862 11    112233445554430 0    1111223333  367777766677776


Q ss_pred             HHHcCCCCCCEEEEEEeecCccCCCCCCccccccceeeeecc
Q 013297          130 WVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGP  171 (446)
Q Consensus       130 ~l~sg~~~~~~aLVVasD~~~y~~~~~~~t~GdGAvA~Ll~~  171 (446)
                      +-+.+   +++.++-.+            ..|..+.||+|++
T Consensus        98 L~~~~---~~~G~as~C------------~gGG~g~A~~iE~  124 (125)
T d1ulqa2          98 MRRRK---VQFGLATMC------------IGVGQGIAVVVEG  124 (125)
T ss_dssp             HHHTT---CSEEEEEEE------------ETTTEEEEEEEEE
T ss_pred             HHhcC---CCEEEEEec------------ccccceeEEEEEe
Confidence            66544   366665432            2466667888764

>d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Thiolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.72  E-value=3.5  Score=32.16  Aligned_cols=82  Identities=7%  Similarity=0.072  Sum_probs=57.7

Q ss_pred             HHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHhhhhhccccccchhhHhhhhcCCCCCCCCCccccchhH
Q 013297          219 TCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDL  298 (446)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~d~~~  298 (446)
                      .+.+.++++.      +++++|||.|=+|-.|.-..-...+.|                        +++.+++-.+   
T Consensus        28 ~Ai~klL~r~------gl~~~Did~~EinEAFA~q~l~~~~~l------------------------~id~~kvN~~---   74 (124)
T d1afwa2          28 YAIPKVLEAT------GLQVQDIDIFEINEAFAAQALYCIHKL------------------------GIDLNKVNPR---   74 (124)
T ss_dssp             HHHHHHHHHH------TCCGGGCSEEEECCSBHHHHHHHHHHH------------------------TCCGGGBSTT---
T ss_pred             HHHHHHHHHc------CCCcccCcEEEeccchhHHHHHHHHHc------------------------CCChhhcccc---
Confidence            3556677776      899999999999999998887777776                        6666654211   


Q ss_pred             HHHHHhhhhhhhhhccCCCccccccccccccchHHHHHHHHHHhcCCCCCCCEEEEEEe
Q 013297          299 EKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSY  357 (446)
Q Consensus       299 ~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~saS~~l~L~~~l~~~~~~~~G~~vll~sy  357 (446)
                                          -=+--+||-..||=--.+.+++.+   ++.+ +.++++.
T Consensus        75 --------------------GGaiAlGHP~GaSGarlv~~l~~~---L~~~-~~glas~  109 (124)
T d1afwa2          75 --------------------GGAIALGHPLGCTGARQVATILRE---LKKD-QIGVVSM  109 (124)
T ss_dssp             --------------------CCHHHHCBCTTTHHHHHHHHHHHH---SCTT-CEEEEEE
T ss_pred             --------------------CccceecCCcCCchHHHHHHHHHH---hccC-CEEEEEE
Confidence                                001256898888888888888876   2333 5566665

>d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Synechocystis sp. [TaxId: 1143]

Probab=86.32  E-value=3  Score=33.88  Aligned_cols=35  Identities=6%  Similarity=-0.051  Sum_probs=27.1

Q ss_pred             HHHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHH
Q 013297          219 TCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFA  259 (446)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~  259 (446)
                      ++++..+++.      ++.++||+++..|..+++..+.+-.
T Consensus        30 ~~i~~Al~~a------~i~~~~i~~v~~HgtGT~~~D~~E~   64 (161)
T d1e5ma2          30 RAIAWALKDS------GLKPEMVSYINAHGTSTPANDVTET   64 (161)
T ss_dssp             HHHHHHHHHH------TCCGGGCCEEECCCCSCHHHHHHHH
T ss_pred             HHHHHHHHHc------CCChhhcceEEEeccCCcccchHHh
Confidence            3455555555      7999999999999999998887643

>d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Thiolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.67  E-value=1.8  Score=33.92  Aligned_cols=95  Identities=12%  Similarity=0.111  Sum_probs=56.4

Q ss_pred             HHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcccC---CCCceeeeeC--CcChhHHHHHHHHHHH
Q 013297           56 MSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFG---NTDIEGVDST--NACYGGTAALFNCVNW  130 (446)
Q Consensus        56 lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl~g---~~~~~~~di~--~aC~gg~~AL~~A~~~  130 (446)
                      =-+.|++++|+++|++.+|||++.+.-    - .-+..-..++.|++.-   |.+--++-++  .||+|.-..+.+...+
T Consensus        25 gPv~Ai~klL~r~gl~~~Did~~EinE----A-FA~q~l~~~~~l~id~~kvN~~GGaiAlGHP~GaSGarlv~~l~~~L   99 (124)
T d1afwa2          25 GPAYAIPKVLEATGLQVQDIDIFEINE----A-FAAQALYCIHKLGIDLNKVNPRGGAIALGHPLGCTGARQVATILREL   99 (124)
T ss_dssp             HHHHHHHHHHHHHTCCGGGCSEEEECC----S-BHHHHHHHHHHHTCCGGGBSTTCCHHHHCBCTTTHHHHHHHHHHHHS
T ss_pred             ChHHHHHHHHHHcCCCcccCcEEEecc----c-hhHHHHHHHHHcCCChhhccccCccceecCCcCCchHHHHHHHHHHh
Confidence            456789999999999999999998621    1 2244556778887610   1111122233  4777776666665554


Q ss_pred             HHcCCCCCCEEEEEEeecCccCCCCCCccccccceeeeeccC
Q 013297          131 VESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPD  172 (446)
Q Consensus       131 l~sg~~~~~~aLVVasD~~~y~~~~~~~t~GdGAvA~Ll~~~  172 (446)
                       +    ++++.|+-.+            ..|.-++|+|++++
T Consensus       100 -~----~~~~glas~C------------~ggG~G~a~~ier~  124 (124)
T d1afwa2         100 -K----KDQIGVVSMC------------IGTGMGAAAIFIKE  124 (124)
T ss_dssp             -C----TTCEEEEEEE------------ETTTEEEEEEEEEC
T ss_pred             -c----cCCEEEEEEc------------ccCCcEEEEEEEeC
Confidence             2    2366655321            12333667777653

>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Polyketide synthase PKS18
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=83.92  E-value=0.95  Score=42.19  Aligned_cols=45  Identities=13%  Similarity=0.077  Sum_probs=35.8

Q ss_pred             HHHHHHHHHHHHHHHCCCCcCCccEEEEEeccCCCCCccHHHHHHHHhcc
Q 013297           53 VISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK  102 (446)
Q Consensus        53 ~~~lA~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~l~~~LGl  102 (446)
                      +.....++.+++|+++|++++|||.+++...     .+.+-..+++.||+
T Consensus       264 ~~~~~~~~i~~~L~~~gl~~~did~~i~Hq~-----~~~i~~~i~~~Lgl  308 (372)
T d1teda_         264 IFSGVAPVVTEMLWDNGLQISDIDLWAIHPG-----GPKIIEQSVRSLGI  308 (372)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGCSCEEECCS-----CHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHhcCCCHHHhhhhhccCc-----cHHHHHHHHHHcCC
Confidence            4566778889999999999999999986432     34566678899998

>d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Biosynthetic thiolase
species: Zoogloea ramigera [TaxId: 350]

Probab=82.40  E-value=3.8  Score=31.96  Aligned_cols=36  Identities=6%  Similarity=0.049  Sum_probs=29.7

Q ss_pred             HHHHHHHHhhhhhCCCCCcCCCceeeccCcchHHHHHHHHHh
Q 013297          220 CYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARL  261 (446)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~did~~i~H~p~~~~~~~~~~~l  261 (446)
                      +.+.++++.      +++++|+|.|=+|-.|....-...+.|
T Consensus        27 A~~~lL~r~------gl~~~Did~~EinEAFA~q~la~~~~l   62 (124)
T d1m3ka2          27 ASRKALERA------GWKIGDLDLVEANEAFAAQACAVNKDL   62 (124)
T ss_dssp             HHHHHHHHH------TCCGGGCSEEEECCSBHHHHHHHHHHH
T ss_pred             HHHHHHHHc------CCChhcccHHHhcccchhheeeehHhh
Confidence            556677776      799999999999999998777777666