Citrus Sinensis ID: 013370

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440----
Protein Sequence
MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLASLEGLAIAGDPHFKTFEAAYPFVIQKLLTENSVATRKILHSVVFNKKKEFQWQRLSLFLRVGATRKGLQQVIAPKTETTLDYLPNRVGVFDAANLVLRLLRTNNGVVLRRLLMTADGASLIRAFVSKEASFFRHELCRVIADALYQWMCEALGRGIPVTRSSQLRVAGGSDNRELEPSSGLSATIYDYQSFLKDRRLKVIFSKILDPVRRDPVLMLRLCWAAFVMLVKASALACQRMLVSLSEAYLGPVLAPKRFAISASNS
Secondary Structure (PSIPRED)
cccccccccccHHHHcccccccccccccHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccccccEEEcccccEEEEEccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccHHHHHHHHHHHHHccHHcccccccccccHHHHHHHccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEcccccccHHHEEEEEEccccccccHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccccccEEEcccccEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHccHHccccHHHccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEcccccHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEccc
Coil and Loop (DISEMBL)
mewmvgesptdlislstgssvdgssthldrqKLDAKWRLLDLVNKGVEATLVQLLETGilhadphpgnlrytssgqigflDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTemdvvrpgtnTLRVTMDLEDAlgevefkdgipdvkfsRVLGKIWSIALKyhfrmppyYTLVLRSLASLEglaiagdphfktfeAAYPFVIQKLLTENSVATRKILHSVVFNKKKEFQWQRLSLFLRVGATRKGLqqviapktettldylpnrvgvfDAANLVLRLLRTNNGVVLRRLLMTADGASLIRAFVSKEASFFRHELCRVIADALYQWMCEAlgrgipvtrssqlrvaggsdnrelepssglsatIYDYQSFLKDRRLKVIFskildpvrrdpvLMLRLCWAAFVMLVKASALACQRMLVSLSeaylgpvlapkrfAISASNS
Flexible Loop (DISEMBL)
mewmvgesptdlislstgssvdgssthldrqKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGevefkdgipdvkfSRVLGKIWSIALKYHFRMPPYYTLVLRSLASLEGLAIAGDPHFKTFEAAYPFVIQKLLTENSVATRKILHSVvfnkkkefqWQRLSLFLRvgatrkglqqviapktettldylpnrVGVFDAANLVLRLLRTNNGVVLRRLLMTADGASLIRAFVSKEASFFRHELCRVIADALYQWMCEALGRGIPVTRSSQLRVaggsdnrelepssglsaTIYDYQSFLKDRRLKVIFskildpvrrdpVLMLRLCWAAFVMLVKASALACQRMLVSLSEaylgpvlapkrfaisasns
Low Complexity Region (SEG)
MEWMVGESPTDLIslstgssvdgsstHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLASLEGLAIAGDPHFKTFEAAYPFVIQKLLTENSVATRKILHSVVFNKKKEFQWQRLSLFLRVGATRKGLQQVIAPKTETTLDYLPNRVGVFDAANLVLRLLRTNNGVVLRRLLMTADGASLIRAFVSKEASFFRHELCRVIADALYQWMCEALGRGIPVTRSSQLRVAGGSDNRELEPSSGLSATIYDYQSFLKDRRLKVIFSKILDPVRRDPVLMLRLCWAAFVMLVKASALACQRMLVSLSEAYLGPVLAPKRFAISASNS
Disordered region (IsUnstruct)
********************************LDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLASLEGLAIAGDPHFKTFEAAYPFVIQKLLTENSVATRKILHSVVFNKKKEFQWQRLSLFLRVGATRKGLQQVIAPKTETTLDYLPNRVGVFDAANLVLRLLRTNNGVVLRRLLMTADGASLIRAFVSKEASFFRHELCRVIADALYQWMCEALGRGIPVT**********************SATIYDYQSFLKDRRLKVIFSKILDPVRRDPVLMLRLCWAAFVMLVKASALACQRMLVSLSEAYLGPVLAPKRFA******
Disordered Region (DISOPRED)
MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLASLEGLAIAGDPHFKTFEAAYPFVIQKLLTENSVATRKILHSVVFNKKKEFQWQRLS*********************************FDAANLVLRLLRTNNGVVLRRLLMTADGASLIRAFVSKEASFFRHELCRVIADALYQWMCEALGRGIPVT**********************************DRRLKVIFSKILDPVRRDPVLMLRLCWAAFVMLVKASALACQRMLVSLSEAYLGPVLA***********
Disordered Region (DISEMBL)
**********DLISLS***********LDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLASLEGLAIAGDPHFKTFEAAYPFVIQKLLTENSVATRKILHSVVFNKKKEFQWQRLSLFLRVGATRKGLQQVIAPKTETTLDYLPNRVGVFDAANLVLRLLRTNNGVVLRRLLMTADGASLIRAFVSKEASFFRHELCRVIADALYQWMCEALGRGIPVTRSSQL*************SSGLSATIYDYQSFLKDRRLKVIFSKILDPVRRDPVLMLRLCWAAFVMLVKASALACQRMLVSLSEAYLGPVLAPKRFAISASNS
Disordered Region (DISPRO)
*EWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLASLEGLAIAGDPHFKTFEAAYPFVIQKLLTENSVATRKILHSVVFNKKKEFQWQRLSLFLRVGATRKGLQQVIAPKTETTLDYLPNRVGVFDAANLVLRLLRTNNGVVLRRLLMTADGASLIRAFVSKEASFFRHELCRVIADALYQWMCEALGRGIPVTRSSQLRVAGGSDN*ELEPSSGLSATIYDYQSFLKDRRLKVIFSKILDPVRRDPVLMLRLCWAAFVMLVKASALACQRMLVSLSEAYLGPVLAPKRFAISAS**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLASLEGLAIAGDPHFKTFEAAYPFVIQKLLTENSVATRKILHSVVFNKKKEFQWQRLSLFLRVGATRKGLQQVIAPKTETTLDYLPNRVGVFDAANLVLRLLRTNNGVVLRRLLMTADGASLIRAFVSKEASFFRHELCRVIADALYQWMCEALGRGIPVTRSSQLRVAGGSDNRELEPSSGLSATIYDYQSFLKDRRLKVIFSKILDPVRRDPVLMLRLCWAAFVMLVKASALACQRMLVSLSEAYLGPVLAPKRFAISASNS
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	444	2.2.26 [Sep-21-2011]
Q9MA15	711	Uncharacterized aarF doma	no	no	0.533	0.333	0.333	2e-38
Q55680	681	Uncharacterized protein s	N/A	no	0.520	0.339	0.32	2e-36
P73121	566	Uncharacterized protein s	N/A	no	0.531	0.416	0.338	8e-36
Q94BU1	692	Uncharacterized aarF doma	no	no	0.423	0.271	0.338	2e-30
Q8RWG1	682	Uncharacterized aarF doma	no	no	0.463	0.302	0.341	3e-29
Q55884	567	Uncharacterized protein s	N/A	no	0.394	0.308	0.312	1e-18
P73627	585	Uncharacterized protein s	N/A	no	0.527	0.4	0.259	8e-16
Q9K0N0	503	Probable ubiquinone biosy	yes	no	0.425	0.375	0.236	1e-11
Q9JVQ5	503	Probable ubiquinone biosy	yes	no	0.425	0.375	0.236	2e-11
Q7NZD1	508	Probable ubiquinone biosy	no	no	0.412	0.360	0.238	2e-09

>sp|Q9MA15|Y1796_ARATH Uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic OS=Arabidopsis thaliana GN=At1g79600 PE=1 SV=1

 Score =  160 bits (405), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 139/258 (53%), Gaps = 21/258 (8%)

Query: 38  RLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAML 97
           ++LDLVN G++ +L QLLE G  HADPHPGNL  T  G++ FLDFG++     + +FA++
Sbjct: 354 KVLDLVNTGIQCSLRQLLEYGFFHADPHPGNLLATPDGKLAFLDFGMMSETPEEARFAII 413

Query: 98  ASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLG 157
             +VH+VN D++++      +  + P  +   +   L D   +      + ++ F  ++ 
Sbjct: 414 GHVVHLVNRDYEAMARDYYALKFLSPDVDVTPIIPALRDFFDDA-LNYTVSELNFKTLVD 472

Query: 158 KIWSIALKYHFRMPPYYTLVLRSLASLEGLAIAGDPHFKTFEAAYPFVIQKLLTENSVAT 217
            + ++  +Y F +PPYY L+LRSL  LEGLA+  DP+FK   A+YP+  ++LLT+ +   
Sbjct: 473 GLGAVFYQYPFNVPPYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYL 532

Query: 218 RKILHSVVFNKKKEFQWQRLSLFLRVGATRKGLQQVIAPKTETTLDYLPNRVGVFDAANL 277
           R  L  ++F K  +F+W RL   L+ G+  +                        DA   
Sbjct: 533 RDALIELLF-KDGKFRWNRLENLLQQGSKDRDF-------------------SAKDALQP 572

Query: 278 VLRLLRTNNGVVLRRLLM 295
           VL+LL   NG  LR L++
Sbjct: 573 VLKLLLDPNGEELRLLVI 590

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: -EC: .EC: -

>sp|Q55680|Y005_SYNY3 Uncharacterized protein sll0005 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0005 PE=3 SV=1

 Score =  154 bits (388), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 136/250 (54%), Gaps = 19/250 (7%)

Query: 1   MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGIL 60
           MEW+ G   T++ ++               Q +DA      LV  GV+ +L QLLE G  
Sbjct: 290 MEWVEGIKLTNIKAIQA-------------QGIDAT----HLVEVGVQCSLRQLLEHGFF 332

Query: 61  HADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDV 120
           HADPHPGNL   + G++ +LDFG++  ++   ++ ++ ++VH+VN D+ SL     ++D 
Sbjct: 333 HADPHPGNLLAMADGRLAYLDFGMMSTIQPYQRYGLIEAVVHLVNRDFDSLAKDYVKLDF 392

Query: 121 VRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRS 180
           ++P T+   +   L    G       + ++ F  +  ++ ++  ++ FR+P YY L++RS
Sbjct: 393 LKPDTDLKPIIPALGQVFGNA-LGASVAELNFKSITDQMSAMMYEFPFRVPAYYALIIRS 451

Query: 181 LASLEGLAIAGDPHFKTFEAAYPFVIQKLLTENSVATRKILHSVVFNKKKEFQWQRLSLF 240
           + +LEG+AI  DP+FK    AYP++ ++LLT+ S   R  L  ++F K+  F+W RL   
Sbjct: 452 MVTLEGIAIGIDPNFKVLSKAYPYIAKRLLTDQSEELRTSLKELLF-KEGSFRWNRLENL 510

Query: 241 LRVGATRKGL 250
           LR      G 
Sbjct: 511 LRNAKNSPGF 520

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

>sp|P73121|Y1919_SYNY3 Uncharacterized protein slr1919 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1919 PE=3 SV=1

 Score =  151 bits (382), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 87/257 (33%), Positives = 136/257 (52%), Gaps = 21/257 (8%)

Query: 41  DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASI 100
           D++  GV + L QLLE G  HADPHPGNL  T  G++ ++DFG++ ++E   +  + +SI
Sbjct: 280 DIIRIGVTSGLRQLLEHGFFHADPHPGNLFATLDGRMAYIDFGMMDQLEPGTKETIASSI 339

Query: 101 VHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIW 160
           V ++N D+ +L      +  + P T+   +   LE+  G       + D  F  +     
Sbjct: 340 VQLINKDYLALTEDFIALGFLAPNTDITPIIPALENVFGSA-IGQSVQDFNFKTITDDFS 398

Query: 161 SIALKYHFRMPPYYTLVLRSLASLEGLAIAGDPHFKTFEAAYPFVIQKLLTENSVATRKI 220
            +   Y FR+P  + L++RSL + EGLA++ DP+FK  E AYP+V ++LLT  S   R+ 
Sbjct: 399 ELMYDYPFRVPAKFALIIRSLVTQEGLALSLDPNFKIVEVAYPYVARRLLTGESPQLRRQ 458

Query: 221 LHSVVFNKKKEFQWQRLSLFLRVGATRKGLQQVIAPKTETTLDYLPNRVGVFDAANLVLR 280
           L  V+F K  +FQWQRL   L +             +++T  D LP        A L L+
Sbjct: 459 LIDVLF-KNGKFQWQRLENMLSIA------------RSDTKFDLLP-------TAQLGLQ 498

Query: 281 LLRTNNGVVLRRLLMTA 297
            L +  G+ LRR ++ A
Sbjct: 499 FLFSEEGLYLRRQILLA 515

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

>sp|Q94BU1|Y1181_ARATH Uncharacterized aarF domain-containing protein kinase At1g71810, chloroplastic OS=Arabidopsis thaliana GN=At1g71810 PE=1 SV=1

 Score =  133 bits (335), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 64/189 (33%), Positives = 109/189 (57%), Gaps = 1/189 (0%)

Query: 40  LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLAS 99
           L LV  GV  +  QLLE G  HADPHPGN   T  GQ+ +LDFG++     + +   + +
Sbjct: 320 LYLVEVGVYCSFNQLLEYGFYHADPHPGNFLRTYDGQLAYLDFGMMGDFRPELRDGFMEA 379

Query: 100 IVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKI 159
            +H+VN D+++L      + ++ P      VT  L D   +     G+ ++ F  +LG +
Sbjct: 380 CLHLVNRDFKALAKDFVTLGLLPPTAEKSAVTKALTDVFQDA-ISRGVRNISFGDLLGDL 438

Query: 160 WSIALKYHFRMPPYYTLVLRSLASLEGLAIAGDPHFKTFEAAYPFVIQKLLTENSVATRK 219
                ++ FR+PPY++LV+RSLA LEG+AI   P++K   + YP++ +K+LT++S   + 
Sbjct: 439 GKTMYRFKFRIPPYFSLVIRSLAVLEGIAIGISPNYKVLGSTYPWIARKILTDSSPQLKS 498

Query: 220 ILHSVVFNK 228
            L ++++ +
Sbjct: 499 SLQNLLYEE 507

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: -

EC: .

EC: -

>sp|Q8RWG1|Y4139_ARATH Uncharacterized aarF domain-containing protein kinase At4g31390, chloroplastic OS=Arabidopsis thaliana GN=At4g31390 PE=1 SV=1

 Score =  129 bits (325), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 114/208 (54%), Gaps = 2/208 (0%)

Query: 34  DAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ 93
           DA   L   +  GV A L QLLE G+ H DPHPGN+     G+I ++DFG +  + ++++
Sbjct: 371 DAGIDLNGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMQDGRIAYVDFGNVAVLSQQNK 430

Query: 94  FAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFS 153
             ++ ++VH VN D+  + +  T +  +   T+   +   LE A+ +     G+ D  F 
Sbjct: 431 QILIDAVVHAVNEDYGEMANDFTRLGFLAKDTDVSPIVPALE-AIWQNSAGKGLADFNFR 489

Query: 154 RVLGKIWSIALKYHFRMPPYYTLVLRSLASLEGLAIAGDPHFKTFEAAYPFVIQKLLTEN 213
            V G+   +   +  R+P  ++LV+RSL + EG+     P FK  E AYP+V ++LLT+ 
Sbjct: 490 SVTGQFNKLVYDFPIRIPERFSLVIRSLLTQEGICFTLKPDFKFLEVAYPYVAKRLLTDP 549

Query: 214 SVATRKILHSVVFNKKKEFQWQRLSLFL 241
           + A R+ L  V+F K   FQW+RL   L
Sbjct: 550 NPALRERLIQVLF-KDGVFQWKRLENLL 576

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: -

EC: .

EC: -

>sp|Q55884|Y095_SYNY3 Uncharacterized protein sll0095 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0095 PE=3 SV=1

 Score = 95.1 bits (235), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 96/179 (53%), Gaps = 4/179 (2%)

Query: 29  DRQKLDAKWRLLDLV-NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCR 87
           DRQ L+     LDLV   G+ A L QLL  G   +DPHPGN+   S G + F DFG +  
Sbjct: 259 DRQALETAGINLDLVIQTGICAYLKQLLVDGFFQSDPHPGNMAVDSQGDLIFYDFGTMAE 318

Query: 88  MERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGI 147
           ++   +  M+ +   ++  D   ++ +L  M +V P  +   +   +   L    F+D  
Sbjct: 319 VKIIAKDQMVQTFFAVLRKDTNQVLEALIYMGLVEPKGDLSPIKRIINFLLD--NFRDKP 376

Query: 148 PDVK-FSRVLGKIWSIALKYHFRMPPYYTLVLRSLASLEGLAIAGDPHFKTFEAAYPFV 205
            D+K F +V  +++++  +  FR+PP  T +L+S+++L+G+A A DP +    A+ PF+
Sbjct: 377 IDIKAFDQVGEEVYAMFQQQPFRLPPQMTFILKSISTLDGIARALDPRYNLIAASQPFI 435

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

>sp|P73627|Y1770_SYNY3 Uncharacterized protein sll1770 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll1770 PE=3 SV=1

 Score = 85.5 bits (210), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 119/270 (44%), Gaps = 36/270 (13%)

Query: 41  DLVNKGVEATLVQLLETGILHADPHPGNLRYT-SSGQIGFLDFGLLCRMERKHQFAMLAS 99
           +L   G  A L QLL  G  HADPHPGNL  +  +G++ F DFG++  +    +  ++ +
Sbjct: 295 ELAQLGARAYLFQLLNHGFFHADPHPGNLAVSPEAGELIFYDFGMMGEITPDTKNKLMDT 354

Query: 100 IVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFK-DGIPDVKF-----S 153
           +  +   + + +V+SL  +         L+ T D+      V+F  D   D  F     +
Sbjct: 355 LFGVAEKNAERIVNSLVAL-------GALKETEDMGPIRRSVQFLLDNFMDKPFEEQSIT 407

Query: 154 RVLGKIWSIALKYHFRMPPYYTLVLRSLASLEGLAIAGDPHFKTFEAAYPFVIQKLLTEN 213
           ++   ++ IA    FR P  +T V+R+ ++LEG+    DP F     A PF +Q +   N
Sbjct: 408 KISDDLYEIAYDQPFRFPATFTFVMRAFSTLEGVGKGLDPDFNFMAVAQPFALQIMNNSN 467

Query: 214 SVATRKILHSVVFNKKKEFQWQRLSLFLRVGATRKGLQQVIAPKTETTLDYLPNRVGVFD 273
                       FN       +     ++VG +  GL + I    E +LD L       D
Sbjct: 468 G-----------FNPAGNIMDELGRQAVQVGNSALGLPRRI----EDSLDRL-------D 505

Query: 274 AANLVLRLLRTNNGVVLRRLLMTADGASLI 303
             ++ +R+  T    +LRR+     G + +
Sbjct: 506 RGDIRVRVRSTETDRLLRRMGTMQMGTNYV 535

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

>sp|Q9K0N0|UBIB_NEIMB Probable ubiquinone biosynthesis protein UbiB OS=Neisseria meningitidis serogroup B (strain MC58) GN=ubiB PE=3 SV=1

 Score = 71.6 bits (174), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/207 (23%), Positives = 91/207 (43%), Gaps = 18/207 (8%)

Query: 1   MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGIL 60
           +EWM G   +D+  L      DG   H              L + GVE    Q+   G  
Sbjct: 238 IEWMDGTPVSDIAKLKA----DGIDLH-------------KLADYGVEIFFTQVFRDGFF 280

Query: 61  HADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDV 120
           HAD HPGN+   +  +   LDFG++  +    +  +  + +   N D++ +  +  E   
Sbjct: 281 HADMHPGNILVAADNRYIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATAHIESGW 340

Query: 121 VRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRS 180
           V   T    +   +  A+ E  F   I  + F  VL +++ ++ +++  + P   L+ ++
Sbjct: 341 VPADTRAEELEAAVR-AVCEPVFNKPISQISFGLVLMRLFEVSRRFNVEIQPQLVLLQKT 399

Query: 181 LASLEGLAIAGDPHFKTFEAAYPFVIQ 207
           L ++EGL    DP    ++ A PF+++
Sbjct: 400 LLNIEGLGRQLDPDLDLWKTAKPFLVK 426

Required, probably indirectly, for the hydroxylation of 2-octaprenylphenol to 2-octaprenyl-6-hydroxy-phenol, the fourth step in ubiquinone biosynthesis.

Neisseria meningitidis serogroup B (strain MC58) (taxid: 122586)

>sp|Q9JVQ5|UBIB_NEIMA Probable ubiquinone biosynthesis protein UbiB OS=Neisseria meningitidis serogroup A / serotype 4A (strain Z2491) GN=ubiB PE=3 SV=1

 Score = 70.9 bits (172), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 18/207 (8%)

Query: 1   MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGIL 60
           +EWM G    D+  L      DG   H              L + GVE    Q+   G  
Sbjct: 238 IEWMDGTPVADIAKLKA----DGIDLH-------------KLADYGVEIFFTQVFRDGFF 280

Query: 61  HADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDV 120
           HAD HPGN+   +  +   LDFG++  +    +  +  + +   N D++ +  +  E   
Sbjct: 281 HADMHPGNILVAADNRYIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATAHIESGW 340

Query: 121 VRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRS 180
           V   T    +   +  A+ E  F   I  + F  VL +++ ++ +++  + P   L+ ++
Sbjct: 341 VPADTRAEELEAAVR-AVCEPVFNKPISQISFGLVLMRLFEVSRRFNVEIQPQLVLLQKT 399

Query: 181 LASLEGLAIAGDPHFKTFEAAYPFVIQ 207
           L ++EGL    DP    ++ A PF+++
Sbjct: 400 LLNIEGLGRQLDPDLDLWKTAKPFLVK 426

Required, probably indirectly, for the hydroxylation of 2-octaprenylphenol to 2-octaprenyl-6-hydroxy-phenol, the fourth step in ubiquinone biosynthesis.

Neisseria meningitidis serogroup A / serotype 4A (strain Z2491) (taxid: 122587)

>sp|Q7NZD1|UBIB_CHRVO Probable ubiquinone biosynthesis protein UbiB OS=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) GN=ubiB PE=3 SV=1

 Score = 64.7 bits (156), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 88/189 (46%), Gaps = 6/189 (3%)

Query: 46  GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVN 105
           GVE    Q+   G  HAD HPGN+   + G+   LDFG++  +    +  +  + +   N
Sbjct: 269 GVEIFFTQVFRHGFFHADMHPGNIFVAADGRYIALDFGIVGSLTDTDKHYLAVNFLAFFN 328

Query: 106 GDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALK 165
            D+  +  +  E   V   T    +   +   + E  F+  + ++ F  VL +++  + +
Sbjct: 329 RDYHRVATAHIESGWVPRDTRAEELEAAVR-TVCEPIFEKPLSEISFGMVLLRLFETSRR 387

Query: 166 YHFRMPPYYTLVLRSLASLEGLAIAGDPHFKTFEAAYPFVIQKLLTENSVATRKILHSVV 225
           ++  + P   L+ ++L ++EGL    DP    ++ A PF + K + E  +  R +L ++ 
Sbjct: 388 FNVEIQPQLVLLQKTLLNIEGLGRQLDPELDLWDTAKPF-LTKWMNEQ-IGWRGLLRTL- 444

Query: 226 FNKKKEFQW 234
             K +  QW
Sbjct: 445 --KHEAPQW 451

Required, probably indirectly, for the hydroxylation of 2-octaprenylphenol to 2-octaprenyl-6-hydroxy-phenol, the fourth step in ubiquinone biosynthesis.

Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) (taxid: 243365)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	444
147800946	825	hypothetical protein VITISV_032583 [Viti	0.993	0.534	0.752	0.0
225449082	824	PREDICTED: uncharacterized protein sll00	0.993	0.535	0.747	0.0
255585088	791	Ubiquinone biosynthesis protein coq-8, p	0.993	0.557	0.712	0.0
356576215	823	PREDICTED: uncharacterized protein sll00	0.984	0.530	0.684	1e-176
356535650	825	PREDICTED: uncharacterized protein sll00	0.986	0.530	0.669	1e-173
357443325	824	aarF domain-containing protein kinase, p	0.970	0.523	0.684	1e-170
449449282	831	PREDICTED: uncharacterized protein sll00	0.984	0.525	0.622	1e-157
449487184	831	PREDICTED: LOW QUALITY PROTEIN: uncharac	0.984	0.525	0.622	1e-157
18404975	814	aarF domain-containing kinase [Arabidops	0.941	0.513	0.6	1e-145
297823809	786	hypothetical protein ARALYDRAFT_903159 [	0.939	0.530	0.586	1e-143

>gi|147800946|emb|CAN75565.1| hypothetical protein VITISV_032583 [Vitis vinifera]

 Score =  671 bits (1730), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/444 (75%), Positives = 376/444 (84%), Gaps = 3/444 (0%)

Query: 1   MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGIL 60
           MEWMVGE+P+DLIS S G+S+   S + +RQ+ DAK RLLDLVNKGVEA+LVQLL+TG+L
Sbjct: 382 MEWMVGENPSDLISASAGNSIAHVSGYSERQQTDAKRRLLDLVNKGVEASLVQLLDTGLL 441

Query: 61  HADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDV 120
           HADPHPGNLRY  SGQIGFLDFGLLCRME+KHQFAMLASIVHIVNGDW SLVH+LTEMDV
Sbjct: 442 HADPHPGNLRYMPSGQIGFLDFGLLCRMEKKHQFAMLASIVHIVNGDWPSLVHALTEMDV 501

Query: 121 VRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRS 180
           +R GTN  RVTMDLEDALGEVEFKDGIPDVKFS+VLGKIWSIALKYHFRMPPYYTLVLRS
Sbjct: 502 IRAGTNIQRVTMDLEDALGEVEFKDGIPDVKFSKVLGKIWSIALKYHFRMPPYYTLVLRS 561

Query: 181 LASLEGLAIAGDPHFKTFEAAYPFVIQKLLTENSVATRKILHSVVFNKKKEFQWQRLSLF 240
           LASLEGLAIA D +FKTFEAAYP+V+QKLLT+NS ATR+ILHSVV N++KEFQWQ+LSLF
Sbjct: 562 LASLEGLAIAADKNFKTFEAAYPYVVQKLLTDNSPATRRILHSVVLNRRKEFQWQKLSLF 621

Query: 241 LRVGATRKGLQQVIAPKTETTLDYLPNRV-GVFDAANLVLRLLRTNNGVVLRRLLMTADG 299
           LRVGATRKGLQQ++AP  E  L+Y P  V G  D ANLVLRLL + +GVVLRRLLMTADG
Sbjct: 622 LRVGATRKGLQQLVAPNGEAPLNYSPGGVNGTVDVANLVLRLLPSKDGVVLRRLLMTADG 681

Query: 300 ASLIRAFVSKEASFFRHELCRVIADALYQWMCEALGRGIPVTR-SSQLRVAGGSDNRELE 358
           ASLIR  +SKEA FFR +LC+ IAD LYQ M E +G+GI +T+ SSQ R+  G +NR+L 
Sbjct: 682 ASLIRMMISKEAIFFRQQLCKAIADVLYQRMLEVIGQGIAITQHSSQWRLRSGPNNRDLS 741

Query: 359 PSSGLSATIYDYQSFLKDRRLKVIFSKILDPVRRDPVLMLRLCWAAFVMLVKASALACQR 418
             S  SA  YDYQS L+DRRLKVIF KI D VRRDPVL LR CWA+F+M + ASALAC R
Sbjct: 742 SLSRSSALTYDYQSVLRDRRLKVIFFKIFDSVRRDPVLTLRFCWASFIMFMTASALACHR 801

Query: 419 MLVSLSEAYLGPVLAP-KRFAISA 441
           +LVSLSE YLGPV  P KR AISA
Sbjct: 802 ILVSLSEIYLGPVSLPSKRVAISA 825

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225449082|ref|XP_002274556.1| PREDICTED: uncharacterized protein sll0005 [Vitis vinifera] gi|296086035|emb|CBI31476.3| unnamed protein product [Vitis vinifera]

 Score =  666 bits (1719), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/444 (74%), Positives = 377/444 (84%), Gaps = 3/444 (0%)

Query: 1   MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGIL 60
           MEWMVGE+P+DLIS S G+S+   S + +RQ+ DAK +LLDLVNKGVEA+LVQLL+TG+L
Sbjct: 381 MEWMVGENPSDLISASAGNSIAHVSGYSERQQTDAKRQLLDLVNKGVEASLVQLLDTGLL 440

Query: 61  HADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDV 120
           HADPHPGNLRY  SGQIGFLDFGLLCRME+KHQFAMLASIVHIVNGDW SLVH+LTEMD+
Sbjct: 441 HADPHPGNLRYMPSGQIGFLDFGLLCRMEKKHQFAMLASIVHIVNGDWPSLVHALTEMDI 500

Query: 121 VRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRS 180
           +R GTN  RVTMDLEDALGEVEFKDGIPDVKFS+VLGKIWSIALKYHFRMPPYYTLVLRS
Sbjct: 501 IRAGTNIQRVTMDLEDALGEVEFKDGIPDVKFSKVLGKIWSIALKYHFRMPPYYTLVLRS 560

Query: 181 LASLEGLAIAGDPHFKTFEAAYPFVIQKLLTENSVATRKILHSVVFNKKKEFQWQRLSLF 240
           LASLEGLAIA D +FKTFEAAYP+V+QKLLT+NS ATR+ILHSVV N++KEFQWQ+LSLF
Sbjct: 561 LASLEGLAIAADKNFKTFEAAYPYVVQKLLTDNSPATRRILHSVVLNRRKEFQWQKLSLF 620

Query: 241 LRVGATRKGLQQVIAPKTETTLDYLPNRV-GVFDAANLVLRLLRTNNGVVLRRLLMTADG 299
           LRVGATRKGLQQ++AP  E  L+Y P  V G  D ANLVLRLL + +GVVLRRLLMTADG
Sbjct: 621 LRVGATRKGLQQLVAPNGEAPLNYSPGGVNGTVDVANLVLRLLPSKDGVVLRRLLMTADG 680

Query: 300 ASLIRAFVSKEASFFRHELCRVIADALYQWMCEALGRGIPVTR-SSQLRVAGGSDNRELE 358
           ASLIR  +SKEA FFR +LC+ IAD LYQ M E +G+GI +T+ SSQ R+  G +NR+L 
Sbjct: 681 ASLIRMMISKEAIFFRQQLCKAIADVLYQRMLEVIGQGIAITQHSSQWRLRSGPNNRDLS 740

Query: 359 PSSGLSATIYDYQSFLKDRRLKVIFSKILDPVRRDPVLMLRLCWAAFVMLVKASALACQR 418
             S  SA  YDYQS L+DRRLKVIF KIL+ VRRDPVL LR CWA+F+M + ASALAC R
Sbjct: 741 SLSRSSALTYDYQSVLRDRRLKVIFFKILNSVRRDPVLTLRFCWASFIMFMTASALACHR 800

Query: 419 MLVSLSEAYLGPVLAP-KRFAISA 441
           +LVSLSE YLGPV  P KR AISA
Sbjct: 801 ILVSLSEIYLGPVSLPSKRVAISA 824

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255585088|ref|XP_002533250.1| Ubiquinone biosynthesis protein coq-8, putative [Ricinus communis] gi|223526930|gb|EEF29135.1| Ubiquinone biosynthesis protein coq-8, putative [Ricinus communis]

 Score =  654 bits (1686), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/445 (71%), Positives = 379/445 (85%), Gaps = 4/445 (0%)

Query: 1   MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGIL 60
           MEW+VGESPTDL+S+S G++VD    + +RQK +AK RLLDLV+KGVEA+LVQLLETG+L
Sbjct: 347 MEWVVGESPTDLLSISAGNAVDHGYAYSERQKTEAKRRLLDLVSKGVEASLVQLLETGLL 406

Query: 61  HADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDV 120
           HADPHPGNLRYTSSGQ+GFLDFGLLC+ME+KHQFAMLASIVHIVNGDW+SLV +L EMD+
Sbjct: 407 HADPHPGNLRYTSSGQLGFLDFGLLCQMEKKHQFAMLASIVHIVNGDWESLVRALIEMDI 466

Query: 121 VRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRS 180
           VRPGTN  RVTM+LE++LGEVEF+DGIPDVKFSRVL KIWS+ALKYHFRMPPYYTLVLRS
Sbjct: 467 VRPGTNLRRVTMELENSLGEVEFRDGIPDVKFSRVLSKIWSVALKYHFRMPPYYTLVLRS 526

Query: 181 LASLEGLAIAGDPHFKTFEAAYPFVIQKLLTENSVATRKILHSVVFNKKKEFQWQRLSLF 240
           LASLEGLA+A DP+FKTFEAAYP+V++KLLTENS  TR+ILHSVV NK+KEF+W RL+LF
Sbjct: 527 LASLEGLAVAADPNFKTFEAAYPYVVRKLLTENSNETRRILHSVVLNKRKEFRWDRLALF 586

Query: 241 LRVGATRKGLQQVIAPKTETTLDYLPNRV--GVFDAANLVLRLLRTNNGVVLRRLLMTAD 298
           LRVG+TRK L + IAPK+E++ DYL NR   GVFD A+LVL LL + +G+ LR+LLMTAD
Sbjct: 587 LRVGSTRKVLNRAIAPKSESSFDYLTNRSSGGVFDVAHLVLLLLPSRDGIALRKLLMTAD 646

Query: 299 GASLIRAFVSKEASFFRHELCRVIADALYQWMCEALGRGIPVTR-SSQLRVAGGSDNREL 357
           GASL+RA VSKEA FFR +L RVIAD LYQW+ + LG G   T+ SSQ+R+    DN+EL
Sbjct: 647 GASLVRAVVSKEAVFFRQQLSRVIADLLYQWVVKTLGIGNKATKYSSQVRLTSELDNKEL 706

Query: 358 EPSSGLSATIYDYQSFLKDRRLKVIFSKILDPVRRDPVLMLRLCWAAFVMLVKASALACQ 417
            PSS LS ++YDYQS  +DRRLKVIFS+IL+   ++PVLML+LCW + VM+V ASALAC 
Sbjct: 707 GPSSNLSMSMYDYQSIFQDRRLKVIFSRILNSAMKNPVLMLKLCWTSVVMVVAASALACH 766

Query: 418 RMLVSLSEAYLGPV-LAPKRFAISA 441
           R+LVSLSE Y+ P  LA K  A+SA
Sbjct: 767 RVLVSLSEIYIAPFSLARKEVALSA 791

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356576215|ref|XP_003556229.1| PREDICTED: uncharacterized protein sll0005-like [Glycine max]

 Score =  625 bits (1612), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 304/444 (68%), Positives = 368/444 (82%), Gaps = 7/444 (1%)

Query: 1   MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGIL 60
           MEWMVGESPTDL+S++ G+SV   S + +RQKLDAK RLLDLV+KGVE+TLVQLLETG+L
Sbjct: 382 MEWMVGESPTDLLSVTAGNSVGNVSGYSERQKLDAKRRLLDLVSKGVESTLVQLLETGLL 441

Query: 61  HADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDV 120
           HADPHPGNLRYTSSGQIGFLDFGLLC+ME++HQFAMLASI+HIVNGDW SLV +L +MDV
Sbjct: 442 HADPHPGNLRYTSSGQIGFLDFGLLCQMEKRHQFAMLASIIHIVNGDWASLVRALVDMDV 501

Query: 121 VRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRS 180
           VRPGTN   VT++LE ALGEVEFK+GIPDVKFSRVLGKIW++ALK+HFRMPPYYTLVLRS
Sbjct: 502 VRPGTNIRLVTLELEQALGEVEFKEGIPDVKFSRVLGKIWTVALKHHFRMPPYYTLVLRS 561

Query: 181 LASLEGLAIAGDPHFKTFEAAYPFVIQKLLTENSVATRKILHSVVFNKKKEFQWQRLSLF 240
           LASLEGLAIA D +FKTFEAAYP+V++KLLTENS ATR ILHSV+ N++KEFQWQRLSLF
Sbjct: 562 LASLEGLAIAADTNFKTFEAAYPYVVRKLLTENSAATRNILHSVLLNQRKEFQWQRLSLF 621

Query: 241 LRVGATRKGLQQVIAPKTETTLDYLPNR-VGVFDAANLVLRLLRTNNGVVLRRLLMTADG 299
           LRVGATRK L +++A  +ET+LD+  N+     D A LVLRLL + +GV +RRLLMTADG
Sbjct: 622 LRVGATRKAL-RLVASNSETSLDHSTNKATDTIDVAYLVLRLLPSKDGVAIRRLLMTADG 680

Query: 300 ASLIRAFVSKEASFFRHELCRVIADALYQWMCEALGRGIPVTRSSQLRVAGGSDNRE--L 357
           ASLI+A VSKE  FFR +LC++I D LYQWM +  G+GI VT+ S++ +A G  N+E  L
Sbjct: 681 ASLIKAMVSKEGKFFRQQLCKIIVDLLYQWMIKLFGQGITVTQYSRVVLANGPSNKESGL 740

Query: 358 EPSSGLSATIYDYQSFLKDRRLKVIFSKILDPVRRDPVLMLRLCWAAFVMLVKASALACQ 417
            P S L    YDY S  +DRRL+VIFSK+L    RD +LMLR  WA+ ++++ AS LAC 
Sbjct: 741 SPRSSLPT--YDYNSIFRDRRLRVIFSKVLKSASRDKILMLRFSWASLLIIITASTLACH 798

Query: 418 RMLVSLSEAYLGPVL-APKRFAIS 440
           +++VSLSEAYLG +  APKR+A+S
Sbjct: 799 QLVVSLSEAYLGKIFDAPKRYAVS 822

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356535650|ref|XP_003536357.1| PREDICTED: uncharacterized protein sll0005-like [Glycine max]

 Score =  613 bits (1580), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 298/445 (66%), Positives = 365/445 (82%), Gaps = 7/445 (1%)

Query: 1   MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGIL 60
           MEWMVGESPTDL+S++ G+SV   S + +RQKLDAK RLLDLV+KG+E+TLVQLLETG+L
Sbjct: 384 MEWMVGESPTDLLSVTAGNSVGNVSEYSERQKLDAKRRLLDLVSKGIESTLVQLLETGLL 443

Query: 61  HADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDV 120
           HADPHPGNLRYTSSGQIGFLDFGLLC+ME++HQ AMLASI+HIVNGDW SLV +L +MDV
Sbjct: 444 HADPHPGNLRYTSSGQIGFLDFGLLCQMEKRHQLAMLASIIHIVNGDWASLVRALVDMDV 503

Query: 121 VRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRS 180
           VRPGTN   VT++LE ALGEVEFK+GIPDVKFSRVLGKIW++ALK+HFRMPPYYTLVLRS
Sbjct: 504 VRPGTNIRLVTLELEQALGEVEFKEGIPDVKFSRVLGKIWTVALKHHFRMPPYYTLVLRS 563

Query: 181 LASLEGLAIAGDPHFKTFEAAYPFVIQKLLTENSVATRKILHSVVFNKKKEFQWQRLSLF 240
           LASLEGLAIA D +FKTFEAAYP+V++KLLTENS ATR ILHSV+ N++KEFQWQRLSLF
Sbjct: 564 LASLEGLAIAADTNFKTFEAAYPYVVRKLLTENSAATRNILHSVLLNQRKEFQWQRLSLF 623

Query: 241 LRVGATRKGLQQVIAPKTETTLDYLPNR-VGVFDAANLVLRLLRTNNGVVLRRLLMTADG 299
           LRVGATRK L +++A  +ET+LD+  ++     D A LVLRLL + +GV +RRLLMTADG
Sbjct: 624 LRVGATRKAL-RLVASNSETSLDHSTSKATDTIDIAYLVLRLLPSKDGVAIRRLLMTADG 682

Query: 300 ASLIRAFVSKEASFFRHELCRVIADALYQWMCEALGRGIPVTRSSQLRVAGGSDNRE--L 357
           ASLI+A VSKE  FFR +LC++I   LYQWM +  G+GI +T+ S++ +A G  ++E  L
Sbjct: 683 ASLIKAMVSKEGEFFREQLCKIIVGILYQWMIKLFGQGITITQYSRMVLANGPSSKESGL 742

Query: 358 EPSSGLSATIYDYQSFLKDRRLKVIFSKILDPVRRDPVLMLRLCWAAFVMLVKASALACQ 417
            P S L    YDY S  +DRRL+VIFSK+L    RD +LMLR  WA+  +++ AS LAC 
Sbjct: 743 SPRSSLPT--YDYNSIFRDRRLRVIFSKVLKSASRDKILMLRFSWASLKIIITASTLACH 800

Query: 418 RMLVSLSEAYLGPVL-APKRFAISA 441
           +++VSLSEAYL  +  APKR+A+SA
Sbjct: 801 QLVVSLSEAYLSKIFDAPKRYAVSA 825

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357443325|ref|XP_003591940.1| aarF domain-containing protein kinase, putative [Medicago truncatula] gi|355480988|gb|AES62191.1| aarF domain-containing protein kinase, putative [Medicago truncatula]

 Score =  605 bits (1560), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 300/438 (68%), Positives = 357/438 (81%), Gaps = 7/438 (1%)

Query: 1   MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGIL 60
           MEWMVGESPTDLIS+STG+S + S    DRQK+DAK RLLDLVNKGVEATLVQLLETG++
Sbjct: 385 MEWMVGESPTDLISVSTGNSTEYS----DRQKVDAKRRLLDLVNKGVEATLVQLLETGLI 440

Query: 61  HADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDV 120
           HADPHPGNLR TSSG+IGFLDFGLLC+ME++HQFAMLASIVHIVNGDW SLV++L +MD+
Sbjct: 441 HADPHPGNLRCTSSGEIGFLDFGLLCQMEKRHQFAMLASIVHIVNGDWASLVNALIDMDM 500

Query: 121 VRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRS 180
           VRPGTN   VTM+LE ALGEVEFKDGIPDVKFSRVLGKI S+A KYHFRMP YYTLVLRS
Sbjct: 501 VRPGTNIRLVTMELEQALGEVEFKDGIPDVKFSRVLGKILSVAFKYHFRMPAYYTLVLRS 560

Query: 181 LASLEGLAIAGDPHFKTFEAAYPFVIQKLLTENSVATRKILHSVVFNKKKEFQWQRLSLF 240
           LAS EGLAIA D  FKTFEAAYP+V++KLLTENS ATRKILHSV+ N+KKEFQWQRLSLF
Sbjct: 561 LASFEGLAIAADKKFKTFEAAYPYVVRKLLTENSAATRKILHSVLLNRKKEFQWQRLSLF 620

Query: 241 LRVGATRKGLQQVIAPKTETTLDYLPNR-VGVFDAANLVLRLLRTNNGVVLRRLLMTADG 299
           LRVGATRK L Q++   +ET+ D  PN+  G FD A L+L +L + +GV LRRLLMTADG
Sbjct: 621 LRVGATRKAL-QLVTSNSETSPDQSPNKAAGTFDIAYLILTILPSKDGVALRRLLMTADG 679

Query: 300 ASLIRAFVSKEASFFRHELCRVIADALYQWMCEALGRGIPVTRSSQLRVAGGSDNRELEP 359
           AS+IRA VSKE    R +LC+VIADAL QWM +  G+G+  T+  ++ +A G+ N+E   
Sbjct: 680 ASIIRAMVSKEGKVIRQQLCKVIADALCQWMIKLCGQGVIDTQYPRVMLANGTSNKESGR 739

Query: 360 SSGLSATIYDYQSFLKDRRLKVIFSKILDPVRRDPVLMLRLCWAAFVMLVKASALACQRM 419
           S   S+  YDY S  +DRRL+VIFSK++       +LMLR CW++ V+++ ASALAC R+
Sbjct: 740 SPRSSSPSYDYISIFRDRRLRVIFSKVVKSASSHKILMLRFCWSSLVIIITASALACHRV 799

Query: 420 LVSLSEAYLGPVL-APKR 436
           ++SLSEAYLGP+  APKR
Sbjct: 800 VLSLSEAYLGPIFDAPKR 817

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449449282|ref|XP_004142394.1| PREDICTED: uncharacterized protein sll0005-like [Cucumis sativus]

 Score =  561 bits (1447), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 277/445 (62%), Positives = 346/445 (77%), Gaps = 8/445 (1%)

Query: 1   MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGIL 60
           MEW+ G+SPT+L+++S+G     SST+ +RQK+DA+ RLLDLVNKGVEATLVQLL+TG+L
Sbjct: 388 MEWISGDSPTELLTISSGKP---SSTYSERQKVDARRRLLDLVNKGVEATLVQLLDTGLL 444

Query: 61  HADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDV 120
           HADPHPGNLRY  SGQIGFLDFGLLCRME KHQ AMLASIVH+VNG+W SLV +L EMDV
Sbjct: 445 HADPHPGNLRYIPSGQIGFLDFGLLCRMEEKHQVAMLASIVHLVNGEWASLVEALAEMDV 504

Query: 121 VRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRS 180
           VRPGTN  RVT+DLE ALGEVEFK GIPDVKFS+VLGKIWS+ALKYHFRMPPYYTL+LRS
Sbjct: 505 VRPGTNMRRVTLDLEYALGEVEFKAGIPDVKFSKVLGKIWSLALKYHFRMPPYYTLMLRS 564

Query: 181 LASLEGLAIAGDPHFKTFEAAYPFVIQKLLTENSVATRKILHSVVFNKKKEFQWQRLSLF 240
           LAS EGLA+A D  FKTFEAA+P+V+QKLLTENSVA RKILHSV+ NKKKEFQWQR+ LF
Sbjct: 565 LASFEGLALAADKDFKTFEAAFPYVVQKLLTENSVANRKILHSVILNKKKEFQWQRVVLF 624

Query: 241 LRVGATRKGLQQVIAPK--TETTLDYLPNRVGV-FDAANLVLRLLRTNNGVVLRRLLMTA 297
           LR+GA R    ++ A K   +  ++Y   +     +  NL+ RLL +  G VLRRL+MT 
Sbjct: 625 LRIGARRYAAIELSAVKANNQAAIEYSTVKANSDLELVNLITRLLVSKEGAVLRRLIMTV 684

Query: 298 DGASLIRAFVSKEASFFRHELCRVIADALYQWMCEALGRGIPVTR-SSQLRVAGGSDNRE 356
           +GASLI+A VSKEA FFR +LC ++AD ++QW  + LG+G   T   + +R+   SD + 
Sbjct: 685 NGASLIQAMVSKEAKFFRQQLCTIVADIIHQWALKTLGQGSQATGLGTTVRMGILSDKKG 744

Query: 357 LEPSSGLSATIYDYQSFLKDRRLKVIFSKILDPVRRDPVLMLRLCWAAFVMLVKASALAC 416
              S   +    DY SFL DRR++++FSK+L      P+LML+  W +FV+ V ASA+AC
Sbjct: 745 RSSSQLTTTGQIDYISFLNDRRMRLLFSKVLKSASTKPILMLKFFWTSFVIFVTASAVAC 804

Query: 417 QRMLVSLSEAYLGPV-LAPKRFAIS 440
            R++VSLSEAYLGP+ L+PK++A++
Sbjct: 805 HRIVVSLSEAYLGPISLSPKQYAVT 829

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449487184|ref|XP_004157521.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein sll0005-like [Cucumis sativus]

 Score =  561 bits (1446), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 277/445 (62%), Positives = 346/445 (77%), Gaps = 8/445 (1%)

Query: 1   MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGIL 60
           MEW+ G+SPT+L+++S+G     SST+ +RQK+DA+ RLLDLVNKGVEATLVQLL+TG+L
Sbjct: 388 MEWISGDSPTELLTISSGKP---SSTYSERQKVDARRRLLDLVNKGVEATLVQLLDTGLL 444

Query: 61  HADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDV 120
           HADPHPGNLRY  SGQIGFLDFGLLCRME KHQ AMLASIVH+VNG+W SLV +L EMDV
Sbjct: 445 HADPHPGNLRYIPSGQIGFLDFGLLCRMEEKHQVAMLASIVHLVNGEWASLVEALAEMDV 504

Query: 121 VRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRS 180
           VRPGTN  RVT+DLE ALGEVEFK GIPDVKFS+VLGKIWS+ALKYHFRMPPYYTL+LRS
Sbjct: 505 VRPGTNMRRVTLDLEYALGEVEFKAGIPDVKFSKVLGKIWSLALKYHFRMPPYYTLMLRS 564

Query: 181 LASLEGLAIAGDPHFKTFEAAYPFVIQKLLTENSVATRKILHSVVFNKKKEFQWQRLSLF 240
           LAS EGLA+A D  FKTFEAA+P+V+QKLLTENSVA RKILHSV+ NKKKEFQWQR+ LF
Sbjct: 565 LASFEGLALAADKDFKTFEAAFPYVVQKLLTENSVANRKILHSVILNKKKEFQWQRVVLF 624

Query: 241 LRVGATRKGLQQVIAPK--TETTLDYLPNRVGV-FDAANLVLRLLRTNNGVVLRRLLMTA 297
           LR+GA R    ++ A K   +  ++Y   +     +  NL+ RLL +  G VLRRL+MT 
Sbjct: 625 LRIGARRYAAIELSAVKANNQAAIEYSTVKANSDLELVNLITRLLVSKEGAVLRRLIMTV 684

Query: 298 DGASLIRAFVSKEASFFRHELCRVIADALYQWMCEALGRGIPVTR-SSQLRVAGGSDNRE 356
           +GASLI+A VSKEA FFR +LC ++AD ++QW  + LG+G   T   + +R+   SD + 
Sbjct: 685 NGASLIQAMVSKEAKFFRQQLCTIVADIIHQWALKTLGQGSQATGLGTTVRMGILSDKKG 744

Query: 357 LEPSSGLSATIYDYQSFLKDRRLKVIFSKILDPVRRDPVLMLRLCWAAFVMLVKASALAC 416
              S   +    DY SFL DRR++++FSK+L      P+LML+  W +FV+ V ASA+AC
Sbjct: 745 RSSSQLTTTGQIDYISFLNDRRMRLLFSKVLKSASTKPILMLKFFWTSFVIFVTASAVAC 804

Query: 417 QRMLVSLSEAYLGPV-LAPKRFAIS 440
            R++VSLSEAYLGP+ L+PK++A++
Sbjct: 805 HRIVVSLSEAYLGPISLSPKQYAVT 829

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18404975|ref|NP_565900.1| aarF domain-containing kinase [Arabidopsis thaliana] gi|20197257|gb|AAC28988.2| putative ABC transporter; alternative splicing isoform gene prediction data combined with cDNA alignment data to generate this model [Arabidopsis thaliana] gi|330254550|gb|AEC09644.1| aarF domain-containing kinase [Arabidopsis thaliana]

 Score =  523 bits (1346), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 258/430 (60%), Positives = 325/430 (75%), Gaps = 12/430 (2%)

Query: 1   MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGIL 60
           MEWMVGESPTDL+++S+G S   + +H ++QK++A+ RLLDLVNKGVEATLVQLL+TGIL
Sbjct: 384 MEWMVGESPTDLLAISSGYSDHDNESH-EKQKIEARRRLLDLVNKGVEATLVQLLDTGIL 442

Query: 61  HADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDV 120
           HADPHPGNLRYT+S QIGFLDFGL+CRM+RKHQ AMLASIVHIVNGDW  LV SL +MDV
Sbjct: 443 HADPHPGNLRYTTSRQIGFLDFGLVCRMQRKHQLAMLASIVHIVNGDWACLVESLIDMDV 502

Query: 121 VRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRS 180
           + PG NT R T+DLE ALGEV+  +GIPD++F++VL KI ++ALKY  RMPPY+TLVLRS
Sbjct: 503 ITPGVNTRRFTLDLEYALGEVKLINGIPDIEFTKVLSKIVNVALKYQLRMPPYFTLVLRS 562

Query: 181 LASLEGLAIAGDPHFKTFEAAYPFVIQKLLTENSVATRKILHSVVFNKKKEFQWQRLSLF 240
           LA LEGLA AGDP+FKTFEAAYPFV+QKL+TENS ATRKILHS V N+KKEF+W+R++LF
Sbjct: 563 LACLEGLAAAGDPNFKTFEAAYPFVVQKLITENSAATRKILHSAVLNRKKEFRWERVALF 622

Query: 241 LRVGATRKGLQQVIAPKTETTLDYLPNRVGV-FDAANLVLRLLRTNNGVVLRRLLMTADG 299
           L   +TRK    +   + ET++D   N      D  +LVLRLL + NGVVLRRLLM A+G
Sbjct: 623 LSKSSTRKQSPLLKLSRDETSVDSSSNLTDKDADNVSLVLRLLASKNGVVLRRLLMAANG 682

Query: 300 ASLIRAFVSKEASFFRHELCRVIADALYQWMCEALGRGIPVTRSSQLRVAGGSDNRELEP 359
            SLIR F+S+EA   R +LC  IA  +YQWM  +LG          L+    SD     P
Sbjct: 683 TSLIRTFISREALVIRQKLCMTIATTMYQWMVGSLG-------IESLKFISLSDP---PP 732

Query: 360 SSGLSATIYDYQSFLKDRRLKVIFSKILDPVRRDPVLMLRLCWAAFVMLVKASALACQRM 419
           SSG++ T+ D++  + D+R++VI  KIL+  + D VLMLR CW +FVM +  +ALAC R 
Sbjct: 733 SSGINITVKDFKILINDKRVRVILRKILESAKSDRVLMLRFCWTSFVMSLTTTALACHRF 792

Query: 420 LVSLSEAYLG 429
           ++S+SE Y+ 
Sbjct: 793 VISVSEGYVN 802

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297823809|ref|XP_002879787.1| hypothetical protein ARALYDRAFT_903159 [Arabidopsis lyrata subsp. lyrata] gi|297325626|gb|EFH56046.1| hypothetical protein ARALYDRAFT_903159 [Arabidopsis lyrata subsp. lyrata]

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 258/440 (58%), Positives = 326/440 (74%), Gaps = 23/440 (5%)

Query: 1   MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGIL 60
           MEWMVGESPTDL+++S+G S   + +H ++QK++A+ RLLDLVNKGVEATLVQLL+TGIL
Sbjct: 347 MEWMVGESPTDLLAISSGYSDHDNESH-EKQKIEARRRLLDLVNKGVEATLVQLLDTGIL 405

Query: 61  HADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDV 120
           HADPHPGNLRYT+S QIGFLDFGL+CRM+RKHQ AMLASIVHIVNGDW  LV SLT+MDV
Sbjct: 406 HADPHPGNLRYTTSRQIGFLDFGLVCRMQRKHQLAMLASIVHIVNGDWAFLVESLTDMDV 465

Query: 121 VRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRS 180
           + PG NT R T+DLE ALGEV+  +GIPD++F++VL KI  +ALKY  RMPPY+TLVLRS
Sbjct: 466 ITPGVNTRRFTLDLEYALGEVKLINGIPDIEFTKVLSKIVKVALKYQLRMPPYFTLVLRS 525

Query: 181 LASLE---------GLAIAGDPHFKTFEAAYPFVIQKLLTENSVATRKILHSVVFNKKKE 231
           LA LE         GLA AGDP+FKTFEAAYPFV+QKL+TENS ATRKILHS V N+KKE
Sbjct: 526 LACLEVICVLFVFPGLAAAGDPNFKTFEAAYPFVVQKLITENSAATRKILHSAVLNRKKE 585

Query: 232 FQWQRLSLFLRVGATRKGLQQVIAPKTETTLDYLPNRVGV-FDAANLVLRLLRTNNGVVL 290
           F+W+R++LFL   +TRK    V   + ET++D   N      D  +LVLRLL + NGVVL
Sbjct: 586 FRWERVALFLSKSSTRKQSPLVTLSRDETSVDSSSNLTDKDADNVSLVLRLLASKNGVVL 645

Query: 291 RRLLMTADGASLIRAFVSKEASFFRHELCRVIADALYQWMCEALGRGIPVTRSSQLRVAG 350
           RRLLM A+G SLIR F+S+E    R +LC  IA+ +YQWM  +LG          L+   
Sbjct: 646 RRLLMAANGTSLIRTFLSREGHVIRQKLCMTIANTMYQWMVGSLG-------IESLKFIS 698

Query: 351 GSDNRELEP-SSGLSATIYDYQSFLKDRRLKVIFSKILDPVRRDPVLMLRLCWAAFVMLV 409
            SD     P SSG++ T+ D++  ++D+R++VI  KIL+  + D +LMLR CW +FVM +
Sbjct: 699 LSD----PPLSSGINITVKDFKILIRDKRVRVILRKILESAKSDQILMLRFCWTSFVMFL 754

Query: 410 KASALACQRMLVSLSEAYLG 429
             +ALAC R ++S+SE Y+ 
Sbjct: 755 TTTALACHRFVISVSEGYIN 774

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	444
TAIR|locus:2056123	814	ATATH8 "AT2G39190" [Arabidopsi	0.936	0.511	0.597	7.3e-130
TAIR|locus:2019838	711	AT1G79600 [Arabidopsis thalian	0.509	0.317	0.344	6.9e-36
TAIR|locus:2093711	793	AT3G24190 [Arabidopsis thalian	0.441	0.247	0.331	1.3e-31
TAIR|locus:2013041	692	AT1G71810 [Arabidopsis thalian	0.522	0.335	0.326	3.5e-29
TAIR|locus:2128116	682	ACDO1 "ABC1-like kinase relate	0.475	0.309	0.341	8.7e-28
UNIPROTKB|Q74E76	561	GSU1088 "Quinone biosynthesis	0.454	0.360	0.239	3.1e-10
TIGR_CMR|GSU_1088	561	GSU_1088 "ubiquinone biosynthe	0.454	0.360	0.239	3.1e-10
UNIPROTKB|Q3ACS7	541	CHY_1218 "ABC1 family protein"	0.362	0.297	0.257	2.2e-09
TIGR_CMR|CHY_1218	541	CHY_1218 "ABC1 family protein"	0.362	0.297	0.257	2.2e-09
TIGR_CMR|SPO_0144	509	SPO_0144 "2-polyprenylphenol 6	0.427	0.373	0.237	3.3e-07

TAIR|locus:2056123 ATATH8 "AT2G39190" [Arabidopsis thaliana (taxid:3702)]

 Score = 1274 (453.5 bits), Expect = 7.3e-130, P = 7.3e-130
 Identities = 257/430 (59%), Positives = 318/430 (73%)

Query:     1 MEWMVGESPTDLIXXXXXXXXXXXXXHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGIL 60
             MEWMVGESPTDL+             H ++QK++A+ RLLDLVNKGVEATLVQLL+TGIL
Sbjct:   384 MEWMVGESPTDLLAISSGYSDHDNESH-EKQKIEARRRLLDLVNKGVEATLVQLLDTGIL 442

Query:    61 HADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDV 120
             HADPHPGNLRYT+S QIGFLDFGL+CRM+RKHQ AMLASIVHIVNGDW  LV SL +MDV
Sbjct:   443 HADPHPGNLRYTTSRQIGFLDFGLVCRMQRKHQLAMLASIVHIVNGDWACLVESLIDMDV 502

Query:   121 VRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRS 180
             + PG NT R T+DLE ALGEV+  +GIPD++F++VL KI ++ALKY  RMPPY+TLVLRS
Sbjct:   503 ITPGVNTRRFTLDLEYALGEVKLINGIPDIEFTKVLSKIVNVALKYQLRMPPYFTLVLRS 562

Query:   181 LASLEGLAIAGDPHFKTFEAAYPFVIQKLLTENSVATRKILHSVVFNKKKEFQWQRLSLF 240
             LA LEGLA AGDP+FKTFEAAYPFV+QKL+TENS ATRKILHS V N+KKEF+W+R++LF
Sbjct:   563 LACLEGLAAAGDPNFKTFEAAYPFVVQKLITENSAATRKILHSAVLNRKKEFRWERVALF 622

Query:   241 LRVGATRKGLQQVIAPKTETTLDYLPNRVGVFDAAN--LVLRLLRTNNGVVLRRLLMTAD 298
             L   +TRK    +   + ET++D   N     DA N  LVLRLL + NGVVLRRLLM A+
Sbjct:   623 LSKSSTRKQSPLLKLSRDETSVDSSSNLTDK-DADNVSLVLRLLASKNGVVLRRLLMAAN 681

Query:   299 GASLIRAFVSKEASFFRHELCRVIADALYQWMCEALGRGIPVTRSSQLRVAGGSDNRELE 358
             G SLIR F+S+EA   R +LC  IA  +YQWM  +LG          L+    SD     
Sbjct:   682 GTSLIRTFISREALVIRQKLCMTIATTMYQWMVGSLG-------IESLKFISLSDP---P 731

Query:   359 PSSGLSATIYDYQSFLKDRRLKVIFSKILDPVRRDPVLMLRLCWAAFVMLVKASALACQR 418
             PSSG++ T+ D++  + D+R++VI  KIL+  + D VLMLR CW +FVM +  +ALAC R
Sbjct:   732 PSSGINITVKDFKILINDKRVRVILRKILESAKSDRVLMLRFCWTSFVMSLTTTALACHR 791

Query:   419 MLVSLSEAYL 428
              ++S+SE Y+
Sbjct:   792 FVISVSEGYV 801

GO:0005215 "transporter activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2019838 AT1G79600 [Arabidopsis thaliana (taxid:3702)]

 Score = 394 (143.8 bits), Expect = 6.9e-36, P = 6.9e-36
 Identities = 80/232 (34%), Positives = 133/232 (57%)

Query:    38 RLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAML 97
             ++LDLVN G++ +L QLLE G  HADPHPGNL  T  G++ FLDFG++     + +FA++
Sbjct:   354 KVLDLVNTGIQCSLRQLLEYGFFHADPHPGNLLATPDGKLAFLDFGMMSETPEEARFAII 413

Query:    98 ASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLG 157
               +VH+VN D++++      +  + P  +   +   L D   +      + ++ F  ++ 
Sbjct:   414 GHVVHLVNRDYEAMARDYYALKFLSPDVDVTPIIPALRDFFDDA-LNYTVSELNFKTLVD 472

Query:   158 KIWSIALKYHFRMPPYYTLVLRSLASLEGLAIAGDPHFKTFEAAYPFVIQKLLTENSVAT 217
              + ++  +Y F +PPYY L+LRSL  LEGLA+  DP+FK   A+YP+  ++LLT+ +   
Sbjct:   473 GLGAVFYQYPFNVPPYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYL 532

Query:   218 RKILHSVVFNKKKEFQWQRLSLFLRVGATRKGL--QQVIAPKTETTLDYLPN 267
             R  L  ++F K  +F+W RL   L+ G+  +    +  + P  +  LD  PN
Sbjct:   533 RDALIELLF-KDGKFRWNRLENLLQQGSKDRDFSAKDALQPVLKLLLD--PN 581

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

TAIR|locus:2093711 AT3G24190 [Arabidopsis thaliana (taxid:3702)]

 Score = 356 (130.4 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 65/196 (33%), Positives = 110/196 (56%)

Query:    41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASI 100
             +LVN GV   L QLL+TG  HADPHPGN+  T  G++  LDFGL+ ++    ++ M+ +I
Sbjct:   397 ELVNVGVICYLKQLLDTGFFHADPHPGNMIRTPDGKLAILDFGLVTKLTDDQKYGMIEAI 456

Query:   101 VHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIW 160
              H+++ D+ ++V    ++  +  G N   +   L     +     G  ++ F  +   + 
Sbjct:   457 AHLIHRDYDAIVKDFVKLGFIPDGVNLAPILPVLAKVFDQALEGGGAKNINFQELAADLA 516

Query:   161 SIALKYHFRMPPYYTLVLRSLASLEGLAIAGDPHFKTFEAAYPFVIQKLLTENSVATRKI 220
              I   Y FR+PPY+ L++R++  LEG+A+ G+P F   + AYP++ Q+LLT+ S   R+ 
Sbjct:   517 QITFDYPFRIPPYFALIIRAIGVLEGIALVGNPEFAIVDEAYPYIAQRLLTDESPRLREA 576

Query:   221 LHSVVFNKKKEFQWQR 236
             L   ++ K   F  +R
Sbjct:   577 LRYTIYGKTGVFDAER 592

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009813 "flavonoid biosynthetic process" evidence=RCA

GO:0010224 "response to UV-B" evidence=RCA

TAIR|locus:2013041 AT1G71810 [Arabidopsis thaliana (taxid:3702)]

 Score = 332 (121.9 bits), Expect = 3.5e-29, P = 3.5e-29
 Identities = 77/236 (32%), Positives = 130/236 (55%)

Query:    28 LDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCR 87
             ++ QKL+ +   L LV  GV  +  QLLE G  HADPHPGN   T  GQ+ +LDFG++  
Sbjct:   309 VEGQKLN-EVNDLYLVEVGVYCSFNQLLEYGFYHADPHPGNFLRTYDGQLAYLDFGMMGD 367

Query:    88 MERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGI 147
                + +   + + +H+VN D+++L      + ++ P      VT  L D   +     G+
Sbjct:   368 FRPELRDGFMEACLHLVNRDFKALAKDFVTLGLLPPTAEKSAVTKALTDVFQDA-ISRGV 426

Query:   148 PDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLASLEGLAIAGDPHFKTFEAAYPFVIQ 207
              ++ F  +LG +     ++ FR+PPY++LV+RSLA LEG+AI   P++K   + YP++ +
Sbjct:   427 RNISFGDLLGDLGKTMYRFKFRIPPYFSLVIRSLAVLEGIAIGISPNYKVLGSTYPWIAR 486

Query:   208 KLLTENSVATRKILHSVVFNKKKEFQWQRL-SLFLRVGATRKGLQQVIAPKTETTL 262
             K+LT++S   +  L ++++ ++  F+  RL SL      T   L Q     TE+ +
Sbjct:   487 KILTDSSPQLKSSLQNLLY-EEGVFRIDRLESLLSESLRTETALVQKPVVGTESNI 541

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

TAIR|locus:2128116 ACDO1 "ABC1-like kinase related to chlorophyll degradation and oxidative stress 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 319 (117.4 bits), Expect = 8.7e-28, P = 8.7e-28
 Identities = 73/214 (34%), Positives = 117/214 (54%)

Query:    29 DRQKL-DAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCR 87
             D Q + DA   L   +  GV A L QLLE G+ H DPHPGN+     G+I ++DFG +  
Sbjct:   365 DPQAIKDAGIDLNGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMQDGRIAYVDFGNVAV 424

Query:    88 MERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGI 147
             + ++++  ++ ++VH VN D+  + +  T +  +   T+   +   LE A+ +     G+
Sbjct:   425 LSQQNKQILIDAVVHAVNEDYGEMANDFTRLGFLAKDTDVSPIVPALE-AIWQNSAGKGL 483

Query:   148 PDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLASLEGLAIAGDPHFKTFEAAYPFVIQ 207
              D  F  V G+   +   +  R+P  ++LV+RSL + EG+     P FK  E AYP+V +
Sbjct:   484 ADFNFRSVTGQFNKLVYDFPIRIPERFSLVIRSLLTQEGICFTLKPDFKFLEVAYPYVAK 543

Query:   208 KLLTENSVATRKILHSVVFNKKKEFQWQRLSLFL 241
             +LLT+ + A R+ L  V+F K   FQW+RL   L
Sbjct:   544 RLLTDPNPALRERLIQVLF-KDGVFQWKRLENLL 576

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0015996 "chlorophyll catabolic process" evidence=IMP

GO:0080183 "response to photooxidative stress" evidence=IMP

UNIPROTKB|Q74E76 GSU1088 "Quinone biosynthesis kinase AarF, putative" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 176 (67.0 bits), Expect = 3.1e-10, P = 3.1e-10
 Identities = 50/209 (23%), Positives = 96/209 (45%)

Query:    28 LDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCR 87
             L+R  +D   RL+    +G +A L  +L  G  H DPHPGN+       I  LD+G++ R
Sbjct:   263 LERAGMDR--RLI--ARRGADAFLKMVLTHGFFHGDPHPGNVLILPDNVICLLDYGMVGR 318

Query:    88 MERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGI 147
             ++ + +  +   ++ IV  D   ++  L     +    +T  +  DL   +    ++  +
Sbjct:   319 LDAQLKGYLTDILLAIVQRDVDEVISLLLYSGEIADTLDTRALKRDLTGLIDNY-YETPL 377

Query:   148 PDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLASLEGLAIAGDPHFKTFEAAYPFVIQ 207
              +++  RVL +   +   YH +  P   L+ ++L ++EG+    DP F   E   PF+ Q
Sbjct:   378 QEIEVGRVLLEFLEVITTYHIKFQPDLMLLAKALVAIEGMGRELDPAFDMVEHLRPFMKQ 437

Query:   208 KLLTENSVATRKILHSVVFNKKKEFQWQR 236
              +   +  + R+++  +  N    F   R
Sbjct:   438 AV--RDRFSPRQLIREMNSNLLSYFTLAR 464

GO:0003674 "molecular_function" evidence=ND

TIGR_CMR|GSU_1088 GSU_1088 "ubiquinone biosynthesis protein AarF, putative" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 176 (67.0 bits), Expect = 3.1e-10, P = 3.1e-10
 Identities = 50/209 (23%), Positives = 96/209 (45%)

Query:    28 LDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCR 87
             L+R  +D   RL+    +G +A L  +L  G  H DPHPGN+       I  LD+G++ R
Sbjct:   263 LERAGMDR--RLI--ARRGADAFLKMVLTHGFFHGDPHPGNVLILPDNVICLLDYGMVGR 318

Query:    88 MERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGI 147
             ++ + +  +   ++ IV  D   ++  L     +    +T  +  DL   +    ++  +
Sbjct:   319 LDAQLKGYLTDILLAIVQRDVDEVISLLLYSGEIADTLDTRALKRDLTGLIDNY-YETPL 377

Query:   148 PDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLASLEGLAIAGDPHFKTFEAAYPFVIQ 207
              +++  RVL +   +   YH +  P   L+ ++L ++EG+    DP F   E   PF+ Q
Sbjct:   378 QEIEVGRVLLEFLEVITTYHIKFQPDLMLLAKALVAIEGMGRELDPAFDMVEHLRPFMKQ 437

Query:   208 KLLTENSVATRKILHSVVFNKKKEFQWQR 236
              +   +  + R+++  +  N    F   R
Sbjct:   438 AV--RDRFSPRQLIREMNSNLLSYFTLAR 464

GO:0003674 "molecular_function" evidence=ND

GO:0006744 "ubiquinone biosynthetic process" evidence=ISS

UNIPROTKB|Q3ACS7 CHY_1218 "ABC1 family protein" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 168 (64.2 bits), Expect = 2.2e-09, P = 2.2e-09
 Identities = 42/163 (25%), Positives = 77/163 (47%)

Query:    47 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNG 106
             VE  ++Q+LE G  HADPHPGN+  T  G I   DFG++  +    +  ++  ++ +V  
Sbjct:   266 VEIFILQILEDGYFHADPHPGNIAITPLGDIILYDFGMVGFLNPWLREILITLLISVVRK 325

Query:   107 DWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKY 166
             D+  +   L E+   R       +  D+ + L    F   +  +    +L ++ ++A K+
Sbjct:   326 DFARISELLIELSQ-RQDIIPAEIKKDVREILNRYYFVP-LSSLSLGELLKELLNLAQKH 383

Query:   167 HFRMPPYYTLVLRSLASLEGLAIAGDPHFKTFEAAYPFVIQKL 209
                +PP   LV +++ +LEG+    + +    E A P     L
Sbjct:   384 EIIIPPEIVLVAKTIIALEGIVKNLNSNLSVAELAEPLATNLL 426

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|CHY_1218 CHY_1218 "ABC1 family protein" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 168 (64.2 bits), Expect = 2.2e-09, P = 2.2e-09
 Identities = 42/163 (25%), Positives = 77/163 (47%)

Query:    47 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNG 106
             VE  ++Q+LE G  HADPHPGN+  T  G I   DFG++  +    +  ++  ++ +V  
Sbjct:   266 VEIFILQILEDGYFHADPHPGNIAITPLGDIILYDFGMVGFLNPWLREILITLLISVVRK 325

Query:   107 DWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKY 166
             D+  +   L E+   R       +  D+ + L    F   +  +    +L ++ ++A K+
Sbjct:   326 DFARISELLIELSQ-RQDIIPAEIKKDVREILNRYYFVP-LSSLSLGELLKELLNLAQKH 383

Query:   167 HFRMPPYYTLVLRSLASLEGLAIAGDPHFKTFEAAYPFVIQKL 209
                +PP   LV +++ +LEG+    + +    E A P     L
Sbjct:   384 EIIIPPEIVLVAKTIIALEGIVKNLNSNLSVAELAEPLATNLL 426

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|SPO_0144 SPO_0144 "2-polyprenylphenol 6-hydroxylase" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 148 (57.2 bits), Expect = 3.3e-07, P = 3.3e-07
 Identities = 46/194 (23%), Positives = 84/194 (43%)

Query:    29 DRQKLDAKWR-LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCR 87
             D   LDA      DL  + +   L+  L  G  HAD H GNL+  + G I   DFG++  
Sbjct:   255 DNAALDAAGHNRRDLGERVLRLFLLHALRDGFFHADMHQGNLKVAADGDIIAYDFGIMGH 314

Query:    88 MERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGI 147
             ++   +      +   +  D++ +     E   V P T  +        A+GE  F    
Sbjct:   315 IDEYTRRVYAEILFGFIRRDYKRVAEVHFEAGYV-PATQDVDEFARALRAVGEPIFGMDA 373

Query:   148 PDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLASLEGLAIAGDPHFKTFEAAYPFVIQ 207
               +   R+L  ++ +  ++         L+ R++  +EG+A + DPH   ++ A P V++
Sbjct:   374 THISMGRLLSYLFEVTERFGMETRTELILLQRTMVVVEGVARSLDPHINIWQVARP-VVE 432

Query:   208 KLLTENSVATRKIL 221
               + + S+  R +L
Sbjct:   433 DYIKQ-SIGPRAVL 445

GO:0006744 "ubiquinone biosynthetic process" evidence=ISS

GO:0016709 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	444
COG0661	517	COG0661, AarF, Predicted unusual protein kinase [G	4e-28
TIGR01982	437	TIGR01982, UbiB, 2-polyprenylphenol 6-hydroxylase	2e-19

>gnl|CDD|223733 COG0661, AarF, Predicted unusual protein kinase [General function prediction only]

 Score =  116 bits (292), Expect = 4e-28
 Identities = 71/287 (24%), Positives = 124/287 (43%), Gaps = 28/287 (9%)

Query: 1   MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGIL 60
           MEW+ G   +D+ +L                 +D K    +L    V A L QLL  G  
Sbjct: 245 MEWIDGIKISDIAAL-------------KSAGIDRK----ELAELLVRAFLRQLLRDGFF 287

Query: 61  HADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDV 120
           HADPHPGN+   S G+I  LDFG++ R++ K +  +   ++  +N D+  +     E+  
Sbjct: 288 HADPHPGNILVRSDGRIVLLDFGIVGRLDPKFRRYLAELLLAFLNRDYDRVAELHVELGY 347

Query: 121 VRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRS 180
           V P T+   +   +   L  +  K  + ++ F  +L K++ +A ++  R+PP   L+ R+
Sbjct: 348 VPPDTDRDPLAAAIRAVLEPIYGKP-LEEISFGEILDKLFEVARRFPMRLPPELVLLQRT 406

Query: 181 LASLEGLAIAGDPHFKTFEAAYPFVIQKLLTENSVATRKILHSVVFNKKKEFQWQRLSLF 240
           L  +EG+    DP F  +  A P + + L  + S    K+L  +    +       L L 
Sbjct: 407 LLLVEGVGRQLDPRFNLWAVAQPLLAKWLKKQLS---PKLLRELK--DEAVAVLNALPLL 461

Query: 241 LRVGA-----TRKGLQQVIAPKTETTLDYLPNRVGVFDAANLVLRLL 282
            R+        R+ L    + +    L     R+ +     +VL + 
Sbjct: 462 PRLLRDLLDNDREELSLRSSEELALLLLKAVARLSIGSILLVVLAVT 508

Length = 517

>gnl|CDD|233667 TIGR01982, UbiB, 2-polyprenylphenol 6-hydroxylase

 Score = 89.7 bits (223), Expect = 2e-19
 Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 22/207 (10%)

Query: 1   MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWR-LLDLVNKGVEATLVQLLETGI 59
           MEW+ G      I LS            D   LD        L      + L Q+L  G 
Sbjct: 237 MEWIDG------IPLS------------DIAALDEAGLDRKALAENLARSFLNQVLRDGF 278

Query: 60  LHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVH-IVNGDWQSLVHSLTEM 118
            HAD HPGN+     G+I  LDFG++ R+  + +   LA I++  +N D++ +     + 
Sbjct: 279 FHADLHPGNIFVLKDGKIIALDFGIVGRLSEEDRRY-LAEILYGFLNRDYRRVAEVHFDA 337

Query: 119 DVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVL 178
             V   T+       +  A+GE  F   + ++   R+L  ++ I   ++  + P   L+ 
Sbjct: 338 GYVPSDTDMAEFEQAIR-AIGEPIFGQPLKEISVGRLLAGLFKITRDFNMELQPQLLLLQ 396

Query: 179 RSLASLEGLAIAGDPHFKTFEAAYPFV 205
           ++L ++EG+    DP    ++ A PFV
Sbjct: 397 KTLLTVEGVGRQLDPDLNMWKVAEPFV 423

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol -> 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]. Length = 437

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	444
COG0661	517	AarF Predicted unusual protein kinase [General fun	100.0
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	100.0
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	100.0
KOG1235	538	consensus Predicted unusual protein kinase [Genera	99.9
KOG1236	565	consensus Predicted unusual protein kinase [Genera	99.83
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	99.32
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.31
KOG1234	363	consensus ABC (ATP binding cassette) 1 protein [Ge	99.19
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.17
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.07
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.03
smart00090	237	RIO RIO-like kinase.	99.02
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.81
KOG0581	364	consensus Mitogen-activated protein kinase kinase	98.77
PRK12274	218	serine/threonine protein kinase; Provisional	98.68
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.68
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	98.67
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	98.63
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.62
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	98.61
PTZ00263	329	protein kinase A catalytic subunit; Provisional	98.59
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	98.58
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	98.58
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	98.57
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	98.57
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	98.57
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	98.57
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	98.56
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	98.56
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	98.55
PRK14879	211	serine/threonine protein kinase; Provisional	98.55
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	98.55
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	98.53
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	98.52
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	98.52
KOG0595	429	consensus Serine/threonine-protein kinase involved	98.52
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	98.51
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	98.5
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.5
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	98.49
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	98.49
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	98.49
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	98.48
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	98.48
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	98.47
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	98.47
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	98.46
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	98.45
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	98.45
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	98.44
KOG0583	370	consensus Serine/threonine protein kinase [Signal	98.44
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.43
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	98.43
KOG0661	538	consensus MAPK related serine/threonine protein ki	98.42
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	98.42
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	98.42
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	98.41
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	98.4
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	98.4
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	98.39
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	98.36
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	98.36
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	98.36
KOG0605	550	consensus NDR and related serine/threonine kinases	98.35
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	98.35
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	98.35
PTZ00267	478	NIMA-related protein kinase; Provisional	98.33
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	98.33
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	98.32
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	98.31
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	98.31
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.31
PRK09188	365	serine/threonine protein kinase; Provisional	98.31
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	98.31
KOG0198	313	consensus MEKK and related serine/threonine protei	98.3
KOG0694	694	consensus Serine/threonine protein kinase [Signal	98.3
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	98.3
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	98.29
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	98.29
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	98.28
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	98.28
KOG0578	550	consensus p21-activated serine/threonine protein k	98.27
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	98.27
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	98.26
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	98.26
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	98.26
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	98.26
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	98.25
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	98.25
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	98.25
KOG0598	357	consensus Ribosomal protein S6 kinase and related	98.25
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	98.22
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	98.22
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	98.21
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	98.2
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	98.2
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	98.2
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	98.2
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	98.19
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	98.19
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	98.19
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	98.19
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	98.19
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	98.18
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	98.18
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	98.18
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	98.17
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	98.17
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	98.17
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	98.17
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	98.17
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	98.16
PLN00034	353	mitogen-activated protein kinase kinase; Provision	98.16
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	98.16
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	98.15
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	98.14
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	98.14
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	98.12
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	98.12
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	98.12
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	98.12
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	98.12
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	98.11
PTZ00283	496	serine/threonine protein kinase; Provisional	98.11
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	98.11
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	98.11
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.11
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	98.1
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	98.1
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	98.1
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	98.1
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	98.09
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.09
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	98.09
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	98.09
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	98.08
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	98.08
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	98.08
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	98.07
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	98.06
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	98.06
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	98.06
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	98.06
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	98.06
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	98.06
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	98.06
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	98.05
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	98.05
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	98.05
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.05
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	98.04
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	98.03
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	98.03
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	98.03
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	98.03
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	98.03
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	98.03
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	98.03
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	98.03
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	98.03
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	98.02
PHA02988	283	hypothetical protein; Provisional	98.02
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	98.02
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	98.01
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	98.01
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	98.01
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	98.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	98.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	98.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	98.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	97.99
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	97.99
KOG0611	668	consensus Predicted serine/threonine protein kinas	97.99
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	97.99
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	97.99
PHA03207	392	serine/threonine kinase US3; Provisional	97.98
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	97.98
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	97.98
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	97.98
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	97.98
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	97.97
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	97.97
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	97.97
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	97.97
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	97.97
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	97.96
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	97.96
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	97.96
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	97.96
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	97.95
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	97.95
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	97.95
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	97.94
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	97.94
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	97.94
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	97.93
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	97.93
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	97.93
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	97.93
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	97.93
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	97.93
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	97.92
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	97.92
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	97.92
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	97.91
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	97.9
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	97.9
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	97.9
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	97.89
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	97.89
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	97.89
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	97.89
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	97.88
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	97.88
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	97.88
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	97.88
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	97.88
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	97.88
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	97.87
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	97.87
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	97.87
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	97.86
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	97.86
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	97.86
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	97.86
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	97.86
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	97.86
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	97.86
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	97.85
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	97.85
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	97.85
COG0478	304	RIO-like serine/threonine protein kinase fused to	97.85
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	97.85
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	97.84
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	97.84
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	97.84
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	97.84
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	97.84
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	97.84
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	97.83
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	97.83
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	97.83
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	97.83
PTZ00036	440	glycogen synthase kinase; Provisional	97.82
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	97.82
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	97.82
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	97.82
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	97.81
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	97.81
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	97.81
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	97.8
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	97.8
KOG0582	516	consensus Ste20-like serine/threonine protein kina	97.8
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	97.8
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	97.79
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	97.79
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	97.78
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	97.78
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	97.78
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	97.77
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	97.77
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	97.77
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	97.76
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	97.76
PHA03212	391	serine/threonine kinase US3; Provisional	97.76
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	97.76
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	97.75
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	97.75
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	97.75
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	97.75
PHA02882	294	putative serine/threonine kinase; Provisional	97.75
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	97.74
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	97.74
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	97.74
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	97.74
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	97.73
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	97.73
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	97.73
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	97.73
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	97.72
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	97.72
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	97.72
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	97.71
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	97.71
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	97.71
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	97.71
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	97.71
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	97.71
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	97.7
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	97.68
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	97.68
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	97.68
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	97.68
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	97.68
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	97.68
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	97.68
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	97.68
PTZ00024	335	cyclin-dependent protein kinase; Provisional	97.67
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	97.67
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	97.67
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	97.67
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	97.67
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	97.66
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	97.66
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	97.66
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	97.65
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	97.64
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	97.64
PF01636	239	APH: Phosphotransferase enzyme family This family	97.63
PHA03209	357	serine/threonine kinase US3; Provisional	97.62
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	97.61
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	97.61
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	97.61
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	97.61
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	97.6
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	97.6
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	97.59
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	97.59
PLN03224	507	probable serine/threonine protein kinase; Provisio	97.59
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	97.58
KOG0577	948	consensus Serine/threonine protein kinase [Signal	97.57
KOG0610	459	consensus Putative serine/threonine protein kinase	97.57
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	97.57
PHA03211	461	serine/threonine kinase US3; Provisional	97.56
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	97.56
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	97.56
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	97.55
KOG0589	426	consensus Serine/threonine protein kinase [General	97.55
KOG0575	592	consensus Polo-like serine/threonine protein kinas	97.55
PRK10345	210	hypothetical protein; Provisional	97.55
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	97.54
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	97.54
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	97.53
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	97.53
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	97.52
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	97.52
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	97.51
PHA03210	501	serine/threonine kinase US3; Provisional	97.51
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	97.5
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	97.5
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	97.49
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	97.48
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	97.48
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	97.48
KOG0192	362	consensus Tyrosine kinase specific for activated (	97.48
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	97.47
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	97.46
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	97.44
KOG1989	738	consensus ARK protein kinase family [Signal transd	97.44
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	97.4
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	97.39
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	97.38
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	97.38
KOG0696	683	consensus Serine/threonine protein kinase [Signal	97.37
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	97.35
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	97.33
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	97.31
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	97.31
PLN00009	294	cyclin-dependent kinase A; Provisional	97.31
KOG0201	467	consensus Serine/threonine protein kinase [Signal	97.3
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	97.28
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	97.27
PTZ00266	1021	NIMA-related protein kinase; Provisional	97.27
KOG0596	677	consensus Dual specificity; serine/threonine and t	97.25
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	97.25
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	97.25
PLN00181	793	protein SPA1-RELATED; Provisional	97.25
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	97.23
PTZ00284	467	protein kinase; Provisional	97.21
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	97.21
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	97.19
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	97.18
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	97.13
KOG1187	361	consensus Serine/threonine protein kinase [Signal	97.12
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	97.11
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	97.11
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	97.08
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	97.07
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	97.07
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	97.06
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	97.06
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	97.04
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	97.02
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	97.02
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	97.01
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	97.01
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	97.0
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	97.0
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	96.97
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	96.96
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	96.94
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	96.92
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	96.9
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	96.89
PRK05231	319	homoserine kinase; Provisional	96.88
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	96.88
PRK10271	188	thiK thiamine kinase; Provisional	96.82
PRK11768	325	serine/threonine protein kinase; Provisional	96.79
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	96.78
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	96.74
KOG3087	229	consensus Serine/threonine protein kinase [General	96.72
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	96.67
KOG2268	465	consensus Serine/threonine protein kinase [Signal	96.67
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	96.66
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	96.66
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	96.64
KOG0690	516	consensus Serine/threonine protein kinase [Signal	96.63
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	96.61
COG2334	331	Putative homoserine kinase type II (protein kinase	96.6
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	96.58
KOG1167	418	consensus Serine/threonine protein kinase of the C	96.55
COG0515	384	SPS1 Serine/threonine protein kinase [General func	96.53
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	96.52
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	96.41
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	96.38
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	96.35
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	96.33
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	96.32
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	96.31
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	96.29
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	96.28
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	96.21
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	96.11
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	95.95
KOG4721	904	consensus Serine/threonine protein kinase, contain	95.94
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	95.8
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	95.63
KOG0695	593	consensus Serine/threonine protein kinase [Signal	95.57
KOG0576	829	consensus Mitogen-activated protein kinase kinase	95.48
KOG0590	601	consensus Checkpoint kinase and related serine/thr	95.46
PRK06148	1013	hypothetical protein; Provisional	95.44
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	95.39
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	95.32
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	95.27
KOG0586	596	consensus Serine/threonine protein kinase [General	95.16
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	95.15
KOG1027	903	consensus Serine/threonine protein kinase and endo	95.11
PRK06149	972	hypothetical protein; Provisional	95.07
KOG1152	772	consensus Signal transduction serine/threonine kin	95.06
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	95.02
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	94.91
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	94.89
PRK12396	409	5-methylribose kinase; Reviewed	94.8
PRK09902	216	hypothetical protein; Provisional	94.75
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	94.74
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	94.72
PLN02756	418	S-methyl-5-thioribose kinase	94.57
PLN02236	344	choline kinase	94.51
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	94.31
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	94.31
PF02958	294	EcKinase: Ecdysteroid kinase; InterPro: IPR004119	94.3
PRK09550	401	mtnK methylthioribose kinase; Reviewed	94.29
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	94.17
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	94.09
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	94.02
PRK10593	297	hypothetical protein; Provisional	94.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	93.98
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	93.88
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	93.55
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	93.45
KOG4717	864	consensus Serine/threonine protein kinase [Signal	93.01
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	92.95
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	92.77
KOG3653	534	consensus Transforming growth factor beta/activin	92.69
smart00146	202	PI3Kc Phosphoinositide 3-kinase, catalytic domain.	92.67
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	92.46
cd00893	289	PI4Kc_III Phosphoinositide 4-kinase (PI4K), Type I	91.22
PLN02876	822	acyl-CoA dehydrogenase	91.13
cd00891	352	PI3Kc Phosphoinositide 3-kinase (PI3K), catalytic	91.13
cd05168	293	PI4Kc_III_beta Phosphoinositide 4-kinase (PI4K), T	90.76
cd00142	219	PI3Kc_like Phosphoinositide 3-kinase (PI3K)-like f	90.51
KOG0607	463	consensus MAP kinase-interacting kinase and relate	90.12
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	89.94
cd05167	311	PI4Kc_III_alpha Phosphoinositide 4-kinase (PI4K),	89.84
KOG0606	1205	consensus Microtubule-associated serine/threonine	89.78
cd00892	237	PIKKc_ATR ATR (Ataxia telangiectasia and Rad3-rela	89.74
cd05164	222	PIKKc Phosphoinositide 3-kinase-related protein ki	89.31
cd05172	235	PIKKc_DNA-PK DNA-dependent protein kinase (DNA-PK)	88.94
cd00896	350	PI3Kc_III Phosphoinositide 3-kinase (PI3K), class	88.89
cd05166	353	PI3Kc_II Phosphoinositide 3-kinase (PI3K), class I	88.64
cd05173	362	PI3Kc_IA_beta Phosphoinositide 3-kinase (PI3K), cl	88.58
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	88.36
cd05169	280	PIKKc_TOR TOR (Target of rapamycin), catalytic dom	88.25
PF00454	235	PI3_PI4_kinase: Phosphatidylinositol 3- and 4-kina	87.77
KOG0903	847	consensus Phosphatidylinositol 4-kinase, involved	87.69
cd05171	279	PIKKc_ATM Ataxia telangiectasia mutated (ATM), cat	87.06
cd05165	366	PI3Kc_I Phosphoinositide 3-kinase (PI3K), class I,	87.01
cd05170	307	PIKKc_SMG1 Suppressor of morphogenetic effect on g	86.44
TIGR02457	528	TreS_Cterm trehalose synthase-fused probable malto	86.16
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	85.53
cd05177	354	PI3Kc_C2_gamma Phosphoinositide 3-kinase (PI3K), c	85.47
KOG0906	843	consensus Phosphatidylinositol 3-kinase VPS34, inv	85.43
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	85.36
cd05174	361	PI3Kc_IA_delta Phosphoinositide 3-kinase (PI3K), c	85.36
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	84.77
PTZ00303	1374	phosphatidylinositol kinase; Provisional	84.59
COG3281	438	Ble Uncharacterized protein, probably involved in	84.45
cd05175	366	PI3Kc_IA_alpha Phosphoinositide 3-kinase (PI3K), c	84.02
COG3178	351	Predicted phosphotransferase related to Ser/Thr pr	83.95
cd00894	365	PI3Kc_IB_gamma Phosphoinositide 3-kinase (PI3K), c	83.76

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=100.00  E-value=4.1e-39  Score=342.34  Aligned_cols=222  Identities=27%  Similarity=0.480  Sum_probs=201.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      ||||+|++++|+.+++.             ++.|    .+.+++.++++|++|++++||||||||||||+|+++|+++++
T Consensus       245 mE~i~Gi~i~d~~~l~~-------------~g~d----~k~ia~~~~~~f~~q~~~dgffHaDpHpGNi~v~~~g~i~~l  307 (517)
T COG0661         245 MEWIDGIKISDIAALKS-------------AGID----RKELAELLVRAFLRQLLRDGFFHADPHPGNILVRSDGRIVLL  307 (517)
T ss_pred             EEeeCCEecccHHHHHh-------------cCCC----HHHHHHHHHHHHHHHHHhcCccccCCCccceEEecCCcEEEE
Confidence            89999999999988752             2333    358999999999999999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHhchhccCCCCcccHHHHHHHHH
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIW  160 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~~~~~~~~l~~~~f~~ll~~l~  160 (444)
                      |||||+++++++|..+++++.++.++|++.+++.+.++|++++++|...+..+++.+..++ ++.++.++++++++++++
T Consensus       308 DfGi~g~l~~~~r~~l~~~~~a~~~rD~~~v~~~~~~~G~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~  386 (517)
T COG0661         308 DFGIVGRLDPKFRRYLAELLLAFLNRDYDRVAELHVELGYVPPDTDRDPLAAAIRAVLEPI-YGKPLEEISFGEILDKLF  386 (517)
T ss_pred             cCcceecCCHHHHHHHHHHHHHHHhhCHHHHHHHHHHhCCCCCccchHHHHHHHHHHHHhh-hCCChhhccHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999988887 578889999999999999


Q ss_pred             HHHHhCCcCCChHHHHHHHHHHHHHHHhhhcCCCCChHHhHHHHHHHHhhccCChHHHHHHHHHHhccccchhHHHHHHH
Q 013370          161 SIALKYHFRMPPYYTLVLRSLASLEGLAIAGDPHFKTFEAAYPFVIQKLLTENSVATRKILHSVVFNKKKEFQWQRLSLF  240 (444)
Q Consensus       161 ~l~~~~~~~vP~~~~li~Ral~~LEGla~~LDP~fdi~~~a~Pyv~r~Ll~~~s~~~r~~L~~~l~~~~~~~~w~Rl~~l  240 (444)
                      ++++++++++|++++++.|++.++||+++.+||++|+++.+.||+.+......+|.+-+.    +. ++....|+++.++
T Consensus       387 ~~~~~~~~r~p~~l~ll~r~~~~vEg~~~~ldp~~~~~~~a~p~~~~~~~~~~~~~~~~~----l~-~~~~~~~~~~~~l  461 (517)
T COG0661         387 EVARRFPMRLPPELVLLQRTLLLVEGVGRQLDPRFNLWAVAQPLLAKWLKKQLSPKLLRE----LK-DEAVAVLNALPLL  461 (517)
T ss_pred             HHHHhcCccCCHHHHHHHHHHHHHHHHHHhhCccccHHHHhhHHHHHHHHHhhhHHHHHH----HH-HhHHHHHHHHHhh
Confidence            999999999999999999999999999999999999999999999999999999883222    22 2455678888887


Q ss_pred             HHhcc
Q 013370          241 LRVGA  245 (444)
Q Consensus       241 l~~~~  245 (444)
                      .+...
T Consensus       462 ~~~~~  466 (517)
T COG0661         462 PRLLR  466 (517)
T ss_pred             HHHHH
Confidence            66554

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=100.00  E-value=6.9e-37  Score=327.03  Aligned_cols=198  Identities=23%  Similarity=0.430  Sum_probs=183.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCC----c
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG----Q   76 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DG----r   76 (444)
                      ||||+|++++|+..+.+             .+.|    ...+++.++++|++|+|++||||||||||||++++||    +
T Consensus       240 mE~i~G~~l~d~~~l~~-------------~g~d----~~~la~~~v~~~~~Qif~~GffHaDpHPGNIlv~~~g~~~~~  302 (537)
T PRK04750        240 MERMYGIPVSDVAALRA-------------AGTD----MKLLAERGVEVFFTQVFRDGFFHADMHPGNIFVSYDPPENPR  302 (537)
T ss_pred             EeeecCccHHhHHHHHh-------------cCCC----HHHHHHHHHHHHHHHHHhCCeeeCCCChHHeEEecCCCCCCe
Confidence            89999999999765532             1222    2478999999999999999999999999999999998    9


Q ss_pred             EEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHhchhccCCCCcccHHHHH
Q 013370           77 IGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVL  156 (444)
Q Consensus        77 LvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~~~~~~~~l~~~~f~~ll  156 (444)
                      ++++|||||++++++.|+.+.+.+.+++++|++++++.+.++|++++++|...|..++..++.++ ++.+++++++++++
T Consensus       303 i~llDFGivg~l~~~~r~~l~~~~~a~~~~D~~~v~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~-~~~~l~~i~~~~~l  381 (537)
T PRK04750        303 YIALDFGIVGSLNKEDKRYLAENFLAFFNRDYRRVAELHVESGWVPPDTRVEELEFAIRAVCEPI-FDKPLAEISFGHVL  381 (537)
T ss_pred             EEEEecceEEECCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHH-hCCCcccccHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999988876 57788999999999


Q ss_pred             HHHHHHHHhCCcCCChHHHHHHHHHHHHHHHhhhcCCCCChHHhHHHHHHHHhhccCChH
Q 013370          157 GKIWSIALKYHFRMPPYYTLVLRSLASLEGLAIAGDPHFKTFEAAYPFVIQKLLTENSVA  216 (444)
Q Consensus       157 ~~l~~l~~~~~~~vP~~~~li~Ral~~LEGla~~LDP~fdi~~~a~Pyv~r~Ll~~~s~~  216 (444)
                      .++++++++|++++||+++++.|++.++||+++.|||++|+++.++||+.+.+.++.+|.
T Consensus       382 ~~l~~~~r~~~~~ip~~l~ll~ktl~~lEG~~r~LdP~~d~~~~a~p~l~~~~~~~~~~~  441 (537)
T PRK04750        382 LRLFNTARRFNVEIQPQLVLLQKTLLNVEGLGRQLDPQLDLWKTAKPFLERWMKEQVGPR  441 (537)
T ss_pred             HHHHHHHHHCCCcccHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhcChH
Confidence            999999999999999999999999999999999999999999999999998887777764

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=100.00  E-value=1.5e-32  Score=288.01  Aligned_cols=197  Identities=23%  Similarity=0.422  Sum_probs=180.3

Q ss_pred             CCCcCCCCcccHHhhcC-CCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLST-GSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~-G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      |||++|.+++++..... |.              +    ..+++..++++++.|+|.+|+||||||||||+++++|++++
T Consensus       237 mE~i~G~~L~~~~~~~~~~~--------------~----~~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~g~i~l  298 (437)
T TIGR01982       237 MEWIDGIPLSDIAALDEAGL--------------D----RKALAENLARSFLNQVLRDGFFHADLHPGNIFVLKDGKIIA  298 (437)
T ss_pred             EEeECCcccccHHHHHhcCC--------------C----HHHHHHHHHHHHHHHHHhCCceeCCCCcccEEECCCCcEEE
Confidence            89999999999875431 11              1    23678889999999999999999999999999999999999


Q ss_pred             EecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHhchhccCCCCcccHHHHHHHH
Q 013370           80 LDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKI  159 (444)
Q Consensus        80 LDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~~~~~~~~l~~~~f~~ll~~l  159 (444)
                      +|||+++.++++.|..+.+++.+++++|++.+++.+.++|+.+++.|...+..++..++..+ .+.++.++++++++.++
T Consensus       299 iDfG~~~~l~~~~r~~l~~l~~a~~~~D~~~l~~~l~~~g~~~~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  377 (437)
T TIGR01982       299 LDFGIVGRLSEEDRRYLAEILYGFLNRDYRRVAEVHFDAGYVPSDTDMAEFEQAIRAIGEPI-FGQPLKEISVGRLLAGL  377 (437)
T ss_pred             EeCCCeeECCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHH-hCCChhhCCHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999988876 46677889999999999


Q ss_pred             HHHHHhCCcCCChHHHHHHHHHHHHHHHhhhcCCCCChHHhHHHHHHHHhhccCChH
Q 013370          160 WSIALKYHFRMPPYYTLVLRSLASLEGLAIAGDPHFKTFEAAYPFVIQKLLTENSVA  216 (444)
Q Consensus       160 ~~l~~~~~~~vP~~~~li~Ral~~LEGla~~LDP~fdi~~~a~Pyv~r~Ll~~~s~~  216 (444)
                      ++++++|++++|++++++.|++.++||++..|||+||+++.++||+.+.+.++.+|.
T Consensus       378 ~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~L~p~~~~~~~~~p~~~~~~~~~~~~~  434 (437)
T TIGR01982       378 FKITRDFNMELQPQLLLLQKTLLTVEGVGRQLDPDLNMWKVAEPFVKRWIRKRLGPK  434 (437)
T ss_pred             HHHHHHCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhhcChh
Confidence            999999999999999999999999999999999999999999999988777766654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=99.90  E-value=2.5e-23  Score=221.82  Aligned_cols=173  Identities=27%  Similarity=0.295  Sum_probs=130.8

Q ss_pred             CCCcCCCCcccHHhhcC-CCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEcc----CC
Q 013370            1 MEWMVGESPTDLISLST-GSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTS----SG   75 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~-G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~----DG   75 (444)
                      |||++|++++|+..+++ |++                  ..++++.++++|++|||.+||||||||||||+|++    ++
T Consensus       281 ME~~~G~~i~Dl~~i~~~gi~------------------~~~i~~~l~~~~~~qIf~~GffHaDPHPGNilv~~~~~~~~  342 (538)
T KOG1235|consen  281 MEYVDGIKINDLDAIDKRGIS------------------PHDILNKLVEAYLEQIFKTGFFHADPHPGNILVRPNPEGDE  342 (538)
T ss_pred             EEecCCccCCCHHHHHHcCCC------------------HHHHHHHHHHHHHHHHHhcCCccCCCCCCcEEEecCCCCCc
Confidence            99999999999999863 554                  23789999999999999999999999999999995    57


Q ss_pred             cEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHhchhccCCCCc------
Q 013370           76 QIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPD------  149 (444)
Q Consensus        76 rLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~~~~~~~~l~~------  149 (444)
                      +++++|||+++.+++..|..|+++|.+++..|...+.+....+|..+ +.+...|..++....-.-..+.+..+      
T Consensus       343 ~ivllDhGl~~~is~~~r~~~~~~~~a~~~~d~~~~~~~~~~~g~~~-d~~~~~fa~~l~~~~~~s~~~~~~~~~~~~~~  421 (538)
T KOG1235|consen  343 EIVLLDHGLYAVISHKTRKDYAELWLALVFEDEKAMQALAEQLGLGL-DDLYPLFATALTGRPWDSVIGAGITKYLKGLE  421 (538)
T ss_pred             cEEEEcccccccccHHHHHHHHHHHHHHhcccHHHHHHHHHHhcccc-chhhhhhHHHHhCCchhhccccchhhhhhhhh
Confidence            99999999999999999999999999999988888888888888886 55655555555431100000001100      


Q ss_pred             -------ccHHHHHHHHHHHHHhCCcCCChHHHHHHHHHHHHHHHhhhcCCCCC
Q 013370          150 -------VKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLASLEGLAIAGDPHFK  196 (444)
Q Consensus       150 -------~~f~~ll~~l~~l~~~~~~~vP~~~~li~Ral~~LEGla~~LDP~fd  196 (444)
                             .........+++...    ++|..+.++.|+...+.|+...+.-..+
T Consensus       422 ~~~~~~~~~~~~~~~~~~~~L~----~~p~~i~li~k~~~l~r~~~~~l~~~~~  471 (538)
T KOG1235|consen  422 EDADENQKIASAKFPGISQLLR----RMPREILLILKTNDLLRGLSSNLGIPSS  471 (538)
T ss_pred             hhhhhHHHHHHHHhhHHHHHHH----hchHhhhhhcccHHHHHhHHHHhccccc
Confidence                   001111222222222    5599999999999999999888876666

>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]

Probab=99.83  E-value=1.5e-19  Score=185.74  Aligned_cols=191  Identities=19%  Similarity=0.280  Sum_probs=165.8

Q ss_pred             CCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccC-------
Q 013370            2 EWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS-------   74 (444)
Q Consensus         2 EwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~D-------   74 (444)
                      +|..|..+....+.+.|.          +      .-.++++..+++++++|++.++|+|||.||||+++...       
T Consensus       325 ~~~~Gl~v~~~v~~~~~p----------e------~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~~t~~~~~  388 (565)
T KOG1236|consen  325 TYERGLSVLRFVKWKSQP----------E------ALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFNKTEDNLR  388 (565)
T ss_pred             eccccccHHhhhhcccCh----------H------HHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEecCCCcccc
Confidence            567788777776654321          1      12357899999999999999999999999999999732       


Q ss_pred             ------------------------------------CcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhc
Q 013370           75 ------------------------------------GQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEM  118 (444)
Q Consensus        75 ------------------------------------GrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~l  118 (444)
                                                          .+++++|-|++..+++..|.++..++.|++..|...+.+.+.+.
T Consensus       389 ~~~~~e~~~~i~~~L~~~~~e~~d~~~~~~~~~~~~P~lvflDtGiv~kLs~qn~~N~l~lF~av~~~~Gy~ag~lml~~  468 (565)
T KOG1236|consen  389 GVHKAEKASAIKRGLEWFRSEVRDARFTDSPDLEYEPTLVFLDTGIVTKLSHQNQMNLLSLFRAVARFDGYDAGELMLER  468 (565)
T ss_pred             ccccchhhhHHhhhhhhhhhhhhhhhhhccccccCCCeEEEecchhhhccChhhHHHHHHHHHHHHHhcchhHHHHHHhh
Confidence                                                47999999999999999999999999999999999999999998


Q ss_pred             CCCCCCCChHHHHHHHHHHHhchhccCCCCcccHHHHHHHHHHHHHhCCcCCChHHHHHHHHHHHHHHHhhhcCCCCChH
Q 013370          119 DVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLASLEGLAIAGDPHFKTF  198 (444)
Q Consensus       119 G~l~~~~d~~~~~~~L~~~l~~~~~~~~l~~~~f~~ll~~l~~l~~~~~~~vP~~~~li~Ral~~LEGla~~LDP~fdi~  198 (444)
                      .--....|.+.|...+|.++.......++.-.+.++++.+++.+++.+++++...|+.++-+.+.+||.+++|||++|++
T Consensus       469 Sr~q~~~d~e~F~~kvEklv~~~~st~sl~tl~i~~ll~em~tmvreH~V~ids~f~tvvlsilvlEG~gRqLdP~lDl~  548 (565)
T KOG1236|consen  469 SRQQQCIDPERFARKVEKLVLKARSTKSLRTLNIGDLLSEMFTMVREHHVRIDSNFTTVVLSILVLEGFGRQLDPDLDLF  548 (565)
T ss_pred             cccccCCCHHHHHHHHHHHHHHhhhhcccCcCcHHHHHHHHHHHHHHhheeeccchHHHHHHHHHHhhhccccCCCcchh
Confidence            87788899999999999988776445567778999999999999999999999999999999999999999999999999


Q ss_pred             HhHHHHHHHH
Q 013370          199 EAAYPFVIQK  208 (444)
Q Consensus       199 ~~a~Pyv~r~  208 (444)
                      +...+|+.-.
T Consensus       549 ~~~~~~l~~~  558 (565)
T KOG1236|consen  549 QLRTFLLNVA  558 (565)
T ss_pred             hhHHHHHHHH
Confidence            9655665433

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=99.32  E-value=1.7e-12  Score=125.49  Aligned_cols=63  Identities=33%  Similarity=0.500  Sum_probs=50.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      ||||||++++|...+..                       ++.+.+++ .++|+|.+|+|||||||||+++++ |.+.+|
T Consensus       122 ~EYIeG~~l~d~~~i~e-----------------------~~~~ki~~-~ikqlH~~G~~HGD~hpgNFlv~~-~~i~iI  176 (229)
T PF06176_consen  122 MEYIEGVELNDIEDIDE-----------------------DLAEKIVE-AIKQLHKHGFYHGDPHPGNFLVSN-NGIRII  176 (229)
T ss_pred             EEEecCeecccchhcCH-----------------------HHHHHHHH-HHHHHHHcCCccCCCCcCcEEEEC-CcEEEE
Confidence            89999999999765420                       23444444 489999999999999999999885 559999


Q ss_pred             eccccccc
Q 013370           81 DFGLLCRM   88 (444)
Q Consensus        81 DFGmv~~L   88 (444)
                      ||++.+..
T Consensus       177 D~~~k~~~  184 (229)
T PF06176_consen  177 DTQGKRMS  184 (229)
T ss_pred             ECcccccc
Confidence            99998864

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.31  E-value=1.3e-12  Score=127.09  Aligned_cols=67  Identities=21%  Similarity=0.453  Sum_probs=52.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.++.+.....            ++           ... .+...+.++|..|++|+||||||++++++| ++++
T Consensus       122 mEyi~G~tL~~~~~~~------------~~-----------~~~-~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~li  176 (232)
T PRK10359        122 IEYIEGVELNDMPEIS------------ED-----------VKA-KIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRII  176 (232)
T ss_pred             EEEECCccHHHhhhcc------------HH-----------HHH-HHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEE
Confidence            8999999998864321            11           111 233458999999999999999999999999 9999


Q ss_pred             ecccccccchhh
Q 013370           81 DFGLLCRMERKH   92 (444)
Q Consensus        81 DFGmv~~L~~~~   92 (444)
                      |||++....++.
T Consensus       177 Dfg~~~~~~e~~  188 (232)
T PRK10359        177 DLSGKRCTAQRK  188 (232)
T ss_pred             ECCCcccccchh
Confidence            999998886543

>KOG1234 consensus ABC (ATP binding cassette) 1 protein [General function prediction only]

Probab=99.19  E-value=5.1e-10  Score=110.92  Aligned_cols=175  Identities=17%  Similarity=0.200  Sum_probs=134.5

Q ss_pred             CCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccC-CcEEEEecccccccchhhHHh
Q 013370           17 TGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS-GQIGFLDFGLLCRMERKHQFA   95 (444)
Q Consensus        17 ~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~D-GrLvlLDFGmv~~L~~~~R~~   95 (444)
                      .|++++..++++|+.++.       ++..+++..|+.+|++.|++.||+-+|++++.. -++.++|||...+.++++-..
T Consensus       170 ~G~pid~~~~~sQ~~rn~-------i~~~~l~lcLrEif~f~fMQTDPNWsNFly~~~tk~i~LlDFGAsr~y~~~F~d~  242 (363)
T KOG1234|consen  170 QGLPIDKTAKLSQETRNY-------IGYKLLELCLREIFEFRFMQTDPNWSNFLYNGRTKKIELLDFGASREYGEKFIDK  242 (363)
T ss_pred             cCccchhhhcccHHHHHH-------HHHHHHHHHHHHHHHHhhhcCCCCHHHhccCCCcceEEEEeccccccccHHHHHH
Confidence            355666666778888774       667777788999999999999999999999864 589999999999999999999


Q ss_pred             HHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHH--HhchhccCCCCcccH-----HHHHHHHHHHHHhCCc
Q 013370           96 MLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDA--LGEVEFKDGIPDVKF-----SRVLGKIWSIALKYHF  168 (444)
Q Consensus        96 l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~--l~~~~~~~~l~~~~f-----~~ll~~l~~l~~~~~~  168 (444)
                      |++++.+...+|-+++.+.-+++||++......-..+-++.+  +++.....  ..++|     +.-+..+..+|.++++
T Consensus       243 Y~~~~~aaa~~dr~~v~e~S~~lgfLtg~Es~~m~DAHv~sv~ilgepfa~~--~pydF~~q~~t~ri~~lipvmL~hRL  320 (363)
T KOG1234|consen  243 YIRLLKAAADRDREGVIEMSRELGFLTGYESKVMEDAHVESVMILGEPFASD--GPYDFGDQTVTDRIQNLIPVMLRHRL  320 (363)
T ss_pred             HHHHHHHHHhcchHHHHHHHHHhcccccchHHHHHHHhhhHhhhccccccCC--CCcCcCccHHHHHHHhhhHHHHhccC
Confidence            999999999999999999999999997643221111223332  33321111  12444     3445566678889998


Q ss_pred             CCChHH-HHHHHHHHHHHHHhhhcCCCCChHHh
Q 013370          169 RMPPYY-TLVLRSLASLEGLAIAGDPHFKTFEA  200 (444)
Q Consensus       169 ~vP~~~-~li~Ral~~LEGla~~LDP~fdi~~~  200 (444)
                      ..||+= ..++|.+.+..=+|..|+..+.+-+.
T Consensus       321 ~pPPeEtYsLHRklsG~fL~cakl~A~v~C~~l  353 (363)
T KOG1234|consen  321 CPPPEETYSLHRKLSGAFLLCAKLGATVPCRDL  353 (363)
T ss_pred             CCCcHHHHHHHHHhhhHHHHHHHhcCCCcHHHH
Confidence            876654 56999999999999999999987543

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.17  E-value=5.9e-11  Score=110.62  Aligned_cols=69  Identities=17%  Similarity=0.340  Sum_probs=56.4

Q ss_pred             HHHHHHHHHHHHHHHHH-cCccccCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHh
Q 013370           40 LDLVNKGVEATLVQLLE-TGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTE  117 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~-~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~  117 (444)
                      ..++..++++ +.++|. .|++|+|+||+||+++ +|++.++|||++..++...       ..+++.+|++.+...|.+
T Consensus       120 ~~i~~~l~~~-l~~lH~~~givHrDlkP~NIll~-~~~~~liDFG~a~~~~~~~-------~~~~~~~~~~~~~~~~~~  189 (190)
T cd05145         120 EELYEQVVEQ-MRRLYQEAGLVHGDLSEYNILYH-DGKPYIIDVSQAVELDHPN-------ALEFLRRDIRNINRFFRK  189 (190)
T ss_pred             HHHHHHHHHH-HHHHHHhCCEecCCCChhhEEEE-CCCEEEEEcccceecCCCC-------HHHHHHHHHHHHHHHhhc
Confidence            4567777766 677777 9999999999999999 8999999999999998753       234567999988877653

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.07  E-value=2.6e-10  Score=106.43  Aligned_cols=83  Identities=18%  Similarity=0.313  Sum_probs=63.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.++.++....                 .    ...++..++.. +.+++..|++|+|+||+|++++++|++.++
T Consensus       110 ~e~~~g~~L~~~~~~~-----------------~----~~~~~~~i~~~-l~~lh~~gi~H~Dl~p~Nill~~~~~~~li  167 (198)
T cd05144         110 MEYIDGVELYRVRVLE-----------------D----PEEVLDEILEE-IVKAYKHGIIHGDLSEFNILVDDDEKIYII  167 (198)
T ss_pred             EEEeCCcchhhccccc-----------------c----HHHHHHHHHHH-HHHHHHCCCCcCCCCcccEEEcCCCcEEEE
Confidence            7999998877653210                 0    12344555444 578899999999999999999999999999


Q ss_pred             ecccccccchhhHHhH----HHHHHHHHh
Q 013370           81 DFGLLCRMERKHQFAM----LASIVHIVN  105 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l----~~ll~alv~  105 (444)
                      |||++..++.+.++.+    .+.+.++++
T Consensus       168 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (198)
T cd05144         168 DWPQMVSTDHPNAEELLDRDVENILRFFR  196 (198)
T ss_pred             ECCccccCCCccHHHHHHHHHHHHHHHHh
Confidence            9999999999988887    555555554

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.03  E-value=4.4e-10  Score=105.49  Aligned_cols=66  Identities=18%  Similarity=0.281  Sum_probs=48.0

Q ss_pred             HHHHHHHHHHHHHH-HHcCccccCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHH
Q 013370           41 DLVNKGVEATLVQL-LETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSL  115 (444)
Q Consensus        41 ~La~~gv~a~L~QL-l~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l  115 (444)
                      .++..++.+ +.++ +..|++|+||||+||+++ +|++.++|||+........-..       +..+|.+.+...|
T Consensus       121 ~i~~qi~~~-L~~l~H~~giiHrDlkP~NIli~-~~~v~LiDFG~a~~~~~~~~~~-------~~~~d~~~~~~~f  187 (190)
T cd05147         121 ELYLQVIQI-MRILYQDCRLVHADLSEYNLLYH-DGKLYIIDVSQSVEHDHPHALE-------FLRMDCVNVNDFF  187 (190)
T ss_pred             HHHHHHHHH-HHHHHHhCCcccCCCCHHHEEEE-CCcEEEEEccccccCCCcCHHH-------HHHHHHHHHHHHh
Confidence            445555544 6777 588999999999999998 5899999999998765543332       2346666665554

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>smart00090 RIO RIO-like kinase

Probab=99.02  E-value=5.3e-10  Score=108.68  Aligned_cols=100  Identities=14%  Similarity=0.224  Sum_probs=75.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETG-ILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~G-fFHADPHPGNILv~~DGrLvl   79 (444)
                      |||++|..+.+.... .+ +      ...       .....++..++.+ +.++|..| ++|+|+||+||+++ +|++.+
T Consensus       127 ~E~~~g~~L~~~~~~-~~-~------~~~-------~~~~~i~~qi~~~-l~~LH~~g~iiH~Dikp~NIli~-~~~i~L  189 (237)
T smart00090      127 MEFIGGDGLPAPRLK-DV-E------PEE-------EEEFELYDDILEE-MRKLYKEGELVHGDLSEYNILVH-DGKVVI  189 (237)
T ss_pred             EEEecCCcccccccc-cC-C------cch-------HHHHHHHHHHHHH-HHHHHhcCCEEeCCCChhhEEEE-CCCEEE
Confidence            799999877664311 11 0      000       1123455555544 88999999 99999999999999 899999


Q ss_pred             EecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCC
Q 013370           80 LDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPG  124 (444)
Q Consensus        80 LDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~  124 (444)
                      +|||++...++..+.       ++..+|+..+...+.+.|..+.+
T Consensus       190 iDFg~a~~~~~~~~~-------~~~~~d~~~~~~~~~~~~~~~~~  227 (237)
T smart00090      190 IDVSQSVELDHPMAL-------EFLERDIRNIIRFFRRKGVDELD  227 (237)
T ss_pred             EEChhhhccCCcchH-------HHHHHHHHHHHHHHHHcCCCcCC
Confidence            999999988876643       45789999999999999986554

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.81  E-value=6.4e-09  Score=95.12  Aligned_cols=66  Identities=18%  Similarity=0.287  Sum_probs=52.7

Q ss_pred             HHHHHHHHHHHHHHHH-cCccccCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCH
Q 013370           41 DLVNKGVEATLVQLLE-TGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDW  108 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~-~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~  108 (444)
                      .++..++.+ +.+++. .|++|+|+||+||+++ +|.+.++|||++.++..+.+..+..-....+++.+
T Consensus       118 ~~~~~~~~~-l~~lh~~~~ivH~Dl~p~Nili~-~~~~~liDfg~a~~~~~~~~~~~~~~~~~~~~~~~  184 (187)
T cd05119         118 ELYDQILEL-MRKLYREAGLVHGDLSEYNILVD-DGKVYIIDVPQAVEIDHPNAEEFLRRDVENINRFF  184 (187)
T ss_pred             HHHHHHHHH-HHHHhhccCcCcCCCChhhEEEE-CCcEEEEECcccccccCcchHHHHHHHHHHHHHHh
Confidence            455555444 677888 9999999999999999 99999999999999999888877765555554444

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=98.77  E-value=1.5e-08  Score=103.31  Aligned_cols=117  Identities=21%  Similarity=0.271  Sum_probs=78.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHH-cCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLE-TGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~-~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      |||+||++|.++....+.++         +      ..+.+++...++. |..|++ ++++|+|.+|.|||++..|++.+
T Consensus       157 mEYMDgGSLd~~~k~~g~i~---------E------~~L~~ia~~VL~G-L~YLh~~~~IIHRDIKPsNlLvNskGeVKi  220 (364)
T KOG0581|consen  157 MEYMDGGSLDDILKRVGRIP---------E------PVLGKIARAVLRG-LSYLHEERKIIHRDIKPSNLLVNSKGEVKI  220 (364)
T ss_pred             hhhcCCCCHHHHHhhcCCCC---------H------HHHHHHHHHHHHH-HHHHhhccCeeeccCCHHHeeeccCCCEEe
Confidence            99999999999886432222         1      2344667666665 888995 99999999999999999999999


Q ss_pred             EecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHH-HHHHhch
Q 013370           80 LDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDL-EDALGEV  141 (444)
Q Consensus        80 LDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L-~~~l~~~  141 (444)
                      +|||.-+.+.......+......+.       .|-+ .-+-..-..|++.|.-.+ |-+++.+
T Consensus       221 cDFGVS~~lvnS~a~tfvGT~~YMs-------PERi-~g~~Ys~~sDIWSLGLsllE~a~Grf  275 (364)
T KOG0581|consen  221 CDFGVSGILVNSIANTFVGTSAYMS-------PERI-SGESYSVKSDIWSLGLSLLELAIGRF  275 (364)
T ss_pred             ccccccHHhhhhhcccccccccccC-------hhhh-cCCcCCcccceecccHHHHHHhhCCC
Confidence            9999999998774444443322221       1211 112233346777765443 4445544

>PRK12274 serine/threonine protein kinase; Provisional

Probab=98.68  E-value=7.4e-08  Score=92.99  Aligned_cols=63  Identities=22%  Similarity=0.288  Sum_probs=51.1

Q ss_pred             HHHHHHHcCccccCC-CCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHh
Q 013370           50 TLVQLLETGILHADP-HPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTE  117 (444)
Q Consensus        50 ~L~QLl~~GfFHADP-HPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~  117 (444)
                      .++++|..|++|+|+ +|+||+++++|++.++|||++...++.-+     ...-+..+|...+.+.+..
T Consensus       103 ~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~-----~~r~L~~rDl~~llk~~~~  166 (218)
T PRK12274        103 LLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRAR-----WMRLLAREDLRHLLKHKRM  166 (218)
T ss_pred             HHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcch-----HHHHHHHHHHHHHHHHHHh
Confidence            478899999999999 69999999999999999999987665433     1233445888888888765

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.68  E-value=2.7e-08  Score=94.04  Aligned_cols=96  Identities=18%  Similarity=0.273  Sum_probs=67.8

Q ss_pred             CCCcC--CCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEE
Q 013370            1 MEWMV--GESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIG   78 (444)
Q Consensus         1 MEwId--G~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLv   78 (444)
                      ||||+  |.++..+....-          .+   .+    ..++...+++.....++..|++|||+++.||++.++ ++.
T Consensus        85 ME~I~~~G~~~~~l~~~~~----------~~---~~----~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~  146 (188)
T PF01163_consen   85 MEYIGEDGVPLPRLKDVDL----------SP---EE----PKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVY  146 (188)
T ss_dssp             EE--EETTEEGGCHHHCGG----------GG---ST----HHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEE
T ss_pred             EEecCCCccchhhHHhccc----------cc---hh----HHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEE
Confidence            89999  999888765420          00   11    235667777777778889999999999999999876 999


Q ss_pred             EEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCC
Q 013370           79 FLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVV  121 (444)
Q Consensus        79 lLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l  121 (444)
                      +||||.+.......-..       +..+|...+.+.|.+.|..
T Consensus       147 iIDf~qav~~~~p~a~~-------~l~RDi~ni~~fF~~~~~~  182 (188)
T PF01163_consen  147 IIDFGQAVDSSHPNAEE-------LLRRDIENIIRFFKKKGVQ  182 (188)
T ss_dssp             E--GTTEEETTSTTHHH-------HHHHHHHHHHHHHHCCC--
T ss_pred             EEecCcceecCCccHHH-------HHHHHHHHHHHHHHHhCCC
Confidence            99999998887544333       3458999999999888865

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=98.67  E-value=1e-07  Score=94.92  Aligned_cols=72  Identities=22%  Similarity=0.216  Sum_probs=54.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+........+        +..       ...++..++.+ +..+|..|++|+|++|.||+++.+|.+.++
T Consensus        75 ~Ey~~~g~L~~~i~~~~~l~--------~~~-------~~~~~~ql~~~-L~~lH~~~ivH~dlkp~NIli~~~~~~kL~  138 (320)
T cd05590          75 MEFVNGGDLMFHIQKSRRFD--------EAR-------ARFYAAEITSA-LMFLHDKGIIYRDLKLDNVLLDHEGHCKLA  138 (320)
T ss_pred             EcCCCCchHHHHHHHcCCCC--------HHH-------HHHHHHHHHHH-HHHHHHCCeEeCCCCHHHeEECCCCcEEEe
Confidence            89999999987665322221        111       22344455544 788999999999999999999999999999


Q ss_pred             eccccccc
Q 013370           81 DFGLLCRM   88 (444)
Q Consensus        81 DFGmv~~L   88 (444)
                      |||+....
T Consensus       139 DfG~~~~~  146 (320)
T cd05590         139 DFGMCKEG  146 (320)
T ss_pred             eCCCCeec
Confidence            99997754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=98.63  E-value=1.8e-07  Score=93.06  Aligned_cols=116  Identities=16%  Similarity=0.116  Sum_probs=71.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+........+        ..+       ...++..++.+ +..+|..|++|+|++|.||+++.+|.+.++
T Consensus        80 ~E~~~~g~L~~~~~~~~~~~--------~~~-------~~~~~~qi~~a-L~~LH~~~ivHrDlkp~Nill~~~~~~kL~  143 (323)
T cd05616          80 MEYVNGGDLMYQIQQVGRFK--------EPH-------AVFYAAEIAIG-LFFLHSKGIIYRDLKLDNVMLDSEGHIKIA  143 (323)
T ss_pred             EcCCCCCCHHHHHHHcCCCC--------HHH-------HHHHHHHHHHH-HHHHHHCCEEecCCCHHHeEECCCCcEEEc
Confidence            79999999987765322111        111       23455555555 678899999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHHH-HHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQSL-VHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~l-a~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||+...........  .    ...+...-+ .+.+. .+......|++.+.--+..++.
T Consensus       144 DfG~~~~~~~~~~~~--~----~~~gt~~y~aPE~~~-~~~~~~~~DiwSlGvil~ellt  196 (323)
T cd05616         144 DFGMCKENMWDGVTT--K----TFCGTPDYIAPEIIA-YQPYGKSVDWWAFGVLLYEMLA  196 (323)
T ss_pred             cCCCceecCCCCCcc--c----cCCCChhhcCHHHhc-CCCCCCccchhchhHHHHHHHh
Confidence            999887543211110  0    001111111 33332 2334556788877666665554

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.62  E-value=1e-07  Score=88.17  Aligned_cols=67  Identities=24%  Similarity=0.359  Sum_probs=51.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.++.+.....               ..       .++..+.. .+..+|..|++|+|+||+|++++ +|++.++
T Consensus        76 ~e~~~g~~l~~~~~~~---------------~~-------~~~~~i~~-~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~li  131 (199)
T TIGR03724        76 MEYIEGKPLKDVIEEG---------------ND-------ELLREIGR-LVGKLHKAGIVHGDLTTSNIIVR-DDKLYLI  131 (199)
T ss_pred             EEEECCccHHHHHhhc---------------HH-------HHHHHHHH-HHHHHHHCCeecCCCCcceEEEE-CCcEEEE
Confidence            7899999888765321               00       23333333 47789999999999999999999 8999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+....++.
T Consensus       132 Dfg~a~~~~~~  142 (199)
T TIGR03724       132 DFGLGKYSDEI  142 (199)
T ss_pred             ECCCCcCCCcH
Confidence            99998876554

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=98.61  E-value=1.7e-07  Score=99.83  Aligned_cols=152  Identities=18%  Similarity=0.179  Sum_probs=96.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|-+++.--+-++        +   ..+    .-.+..++.+ ++.||..|++|+|++|.|||++.||++.+-
T Consensus       153 Le~A~nGdll~~i~K~Gsfd--------e---~ca----R~YAAeIldA-leylH~~GIIHRDlKPENILLd~dmhikIT  216 (604)
T KOG0592|consen  153 LEYAPNGDLLDLIKKYGSFD--------E---TCA----RFYAAEILDA-LEYLHSNGIIHRDLKPENILLDKDGHIKIT  216 (604)
T ss_pred             EEecCCCcHHHHHHHhCcch--------H---HHH----HHHHHHHHHH-HHHHHhcCceeccCChhheeEcCCCcEEEe
Confidence            58899998888776432111        0   010    1234444444 899999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHh--------CCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHhchhccCCCCcccH
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVN--------GDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKF  152 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~--------~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~~~~~~~~l~~~~f  152 (444)
                      |||....|++.....- ........        +..+-+.-.+..-+...+..|+++|.=-+..++...   .+....|=
T Consensus       217 DFGsAK~l~~~~~~~~-~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~---PPFra~Ne  292 (604)
T KOG0592|consen  217 DFGSAKILSPSQKSQE-NPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQ---PPFRAANE  292 (604)
T ss_pred             eccccccCChhhcccc-CccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCC---CCCccccH
Confidence            9999999998765421 00000000        112223333455577888899998877777777542   23322222


Q ss_pred             HHHHHHHHHHHHhCCcCCCh
Q 013370          153 SRVLGKIWSIALKYHFRMPP  172 (444)
Q Consensus       153 ~~ll~~l~~l~~~~~~~vP~  172 (444)
                      =-++.+++++-+.++-.+|+
T Consensus       293 yliFqkI~~l~y~fp~~fp~  312 (604)
T KOG0592|consen  293 YLIFQKIQALDYEFPEGFPE  312 (604)
T ss_pred             HHHHHHHHHhcccCCCCCCH
Confidence            23456666777766655553

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=98.59  E-value=2.7e-07  Score=92.29  Aligned_cols=113  Identities=15%  Similarity=0.131  Sum_probs=72.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+........+        ++.       ...++..++.+ +..+|..|++|+|++|.||+++.+|.+.+.
T Consensus        97 ~e~~~~~~L~~~l~~~~~~~--------~~~-------~~~~~~qi~~a-L~~LH~~~ivH~dlkp~NIll~~~~~~kl~  160 (329)
T PTZ00263         97 LEFVVGGELFTHLRKAGRFP--------NDV-------AKFYHAELVLA-FEYLHSKDIIYRDLKPENLLLDNKGHVKVT  160 (329)
T ss_pred             EcCCCCChHHHHHHHcCCCC--------HHH-------HHHHHHHHHHH-HHHHHHCCeeecCCCHHHEEECCCCCEEEe
Confidence            79999999988765322111        111       12334444444 788999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHH-HHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQ-SLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~-~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||+...+++.... +        .+... ...+.+..- ......|++.+.--+..++.
T Consensus       161 Dfg~~~~~~~~~~~-~--------~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ellt  210 (329)
T PTZ00263        161 DFGFAKKVPDRTFT-L--------CGTPEYLAPEVIQSK-GHGKAVDWWTMGVLLYEFIA  210 (329)
T ss_pred             eccCceEcCCCcce-e--------cCChhhcCHHHHcCC-CCCCcceeechHHHHHHHHc
Confidence            99999887654321 1        11111 123444332 23456788777666666554

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=98.58  E-value=2.8e-07  Score=91.95  Aligned_cols=115  Identities=17%  Similarity=0.127  Sum_probs=71.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+........+        ..+       ...++..++.+ +..+|..|++|+|++|+||+++.+|.+.++
T Consensus        80 ~Ey~~~g~L~~~i~~~~~l~--------~~~-------~~~i~~qi~~a-l~~lH~~~ivHrDikp~Nill~~~~~ikL~  143 (323)
T cd05615          80 MEYVNGGDLMYHIQQVGKFK--------EPQ-------AVFYAAEISVG-LFFLHRRGIIYRDLKLDNVMLDSEGHIKIA  143 (323)
T ss_pred             EcCCCCCcHHHHHHHcCCCC--------HHH-------HHHHHHHHHHH-HHHHHHCCeeccCCCHHHeEECCCCCEEEe
Confidence            79999999987765322111        111       22455555554 788999999999999999999999999999


Q ss_pred             ecccccccchhhH--HhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQ--FAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R--~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||+.........  .....      ...| ...+.+. -+......|.+.+.--+..++.
T Consensus       144 Dfg~~~~~~~~~~~~~~~~g------t~~y-~aPE~~~-~~~~~~~~DiwslGvil~ellt  196 (323)
T cd05615         144 DFGMCKEHMVDGVTTRTFCG------TPDY-IAPEIIA-YQPYGKSVDWWAYGVLLYEMLA  196 (323)
T ss_pred             ccccccccCCCCccccCccC------Cccc-cCHHHHc-CCCCCCccchhhhHHHHHHHHh
Confidence            9998765432211  11100      0111 1133332 2334556788877666666554

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=98.58  E-value=2.1e-07  Score=92.62  Aligned_cols=72  Identities=22%  Similarity=0.205  Sum_probs=54.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..+.+........+        +.       ....++..++.+ +..+|..|++|+|++|.||+++.+|.+.++
T Consensus        75 ~e~~~~~~L~~~~~~~~~~~--------~~-------~~~~~~~qi~~~-L~~lH~~giiHrDlkp~Nili~~~~~~kl~  138 (325)
T cd05602          75 LDYINGGELFYHLQRERCFL--------EP-------RARFYAAEIASA-LGYLHSLNIVYRDLKPENILLDSQGHIVLT  138 (325)
T ss_pred             EeCCCCCcHHHHHHhcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCeEecCCCHHHeEECCCCCEEEc
Confidence            79999999988765322211        11       122455555555 788999999999999999999999999999


Q ss_pred             eccccccc
Q 013370           81 DFGLLCRM   88 (444)
Q Consensus        81 DFGmv~~L   88 (444)
                      |||+....
T Consensus       139 DfG~a~~~  146 (325)
T cd05602         139 DFGLCKEN  146 (325)
T ss_pred             cCCCCccc
Confidence            99998654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=98.57  E-value=2.4e-07  Score=92.11  Aligned_cols=72  Identities=21%  Similarity=0.199  Sum_probs=53.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+........+        +..       ...++..++.+ +..+|..|++|+|++|.||+++.+|.+.++
T Consensus        75 ~E~~~~~~L~~~l~~~~~~~--------~~~-------~~~~~~qi~~a-L~~LH~~~ivHrDikp~Nill~~~~~~kL~  138 (321)
T cd05591          75 MEYVNGGDLMFQIQRSRKFD--------EPR-------SRFYAAEVTLA-LMFLHRHGVIYRDLKLDNILLDAEGHCKLA  138 (321)
T ss_pred             EeCCCCCcHHHHHHHcCCCC--------HHH-------HHHHHHHHHHH-HHHHHHCCeeccCCCHHHeEECCCCCEEEe
Confidence            79999999887664322111        111       12344555544 788999999999999999999999999999


Q ss_pred             eccccccc
Q 013370           81 DFGLLCRM   88 (444)
Q Consensus        81 DFGmv~~L   88 (444)
                      |||+....
T Consensus       139 Dfg~~~~~  146 (321)
T cd05591         139 DFGMCKEG  146 (321)
T ss_pred             ecccceec
Confidence            99988754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=98.57  E-value=2.4e-07  Score=88.39  Aligned_cols=76  Identities=20%  Similarity=0.194  Sum_probs=57.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.+|.+........        +...       ...++..++.+ +..++..|++|+|++|.|++++.+|++.++
T Consensus        81 ~e~~~~~~L~~~l~~~~~l--------~~~~-------~~~i~~ql~~~-l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~  144 (280)
T cd05581          81 LEYAPNGELLQYIRKYGSL--------DEKC-------TRFYAAEILLA-LEYLHSKGIIHRDLKPENILLDKDMHIKIT  144 (280)
T ss_pred             EcCCCCCcHHHHHHHcCCC--------CHHH-------HHHHHHHHHHH-HHHHHHCCeeecCCCHHHeEECCCCCEEec
Confidence            7999999998876532111        1111       23455555555 678999999999999999999999999999


Q ss_pred             ecccccccchhh
Q 013370           81 DFGLLCRMERKH   92 (444)
Q Consensus        81 DFGmv~~L~~~~   92 (444)
                      |||+...+....
T Consensus       145 df~~~~~~~~~~  156 (280)
T cd05581         145 DFGTAKVLDPNS  156 (280)
T ss_pred             CCccccccCCcc
Confidence            999998776544

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=98.57  E-value=2.4e-07  Score=92.24  Aligned_cols=72  Identities=21%  Similarity=0.210  Sum_probs=54.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+........+        +.       ....++..++.+ +..+|..|++|+|++|.||+++.+|.+.+.
T Consensus        75 ~e~~~~g~L~~~l~~~~~~~--------~~-------~~~~~~~qi~~~-l~~lH~~givH~dikp~NIll~~~~~~kl~  138 (323)
T cd05575          75 LDYVNGGELFFHLQRERSFP--------EP-------RARFYAAEIASA-LGYLHSLNIIYRDLKPENILLDSQGHVVLT  138 (323)
T ss_pred             EcCCCCCCHHHHHHhcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCeEeCCCCHHHeEECCCCcEEEe
Confidence            79999999877664321111        11       122345555554 788999999999999999999999999999


Q ss_pred             eccccccc
Q 013370           81 DFGLLCRM   88 (444)
Q Consensus        81 DFGmv~~L   88 (444)
                      |||+....
T Consensus       139 Dfg~~~~~  146 (323)
T cd05575         139 DFGLCKEG  146 (323)
T ss_pred             ccCCCccc
Confidence            99987653

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=98.57  E-value=5.5e-07  Score=88.18  Aligned_cols=114  Identities=18%  Similarity=0.183  Sum_probs=73.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+........+        +..       ...++..++.+ +..+|..|++|+|++|.||+++.+|.+.+.
T Consensus        80 ~e~~~~~~L~~~~~~~~~~~--------~~~-------~~~~~~qi~~~-l~~lH~~~i~H~dlkp~NIli~~~~~~kl~  143 (291)
T cd05612          80 MEYVPGGELFSYLRNSGRFS--------NST-------GLFYASEIVCA-LEYLHSKEIVYRDLKPENILLDKEGHIKLT  143 (291)
T ss_pred             EeCCCCCCHHHHHHHcCCCC--------HHH-------HHHHHHHHHHH-HHHHHHCCeeecCCCHHHeEECCCCCEEEE
Confidence            79999999988765432111        111       12344444444 788999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||+...+...... ...      ...| ...|.+...+ .....|++.+.--+..++.
T Consensus       144 Dfg~~~~~~~~~~~-~~g------t~~y-~aPE~~~~~~-~~~~~DiwSlG~il~~l~~  193 (291)
T cd05612         144 DFGFAKKLRDRTWT-LCG------TPEY-LAPEVIQSKG-HNKAVDWWALGILIYEMLV  193 (291)
T ss_pred             ecCcchhccCCccc-ccC------Chhh-cCHHHHcCCC-CCchhhHHHHHHHHHHHHh
Confidence            99998876543211 110      0111 1234443322 3455788877766666554

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=98.56  E-value=3.1e-07  Score=91.42  Aligned_cols=73  Identities=22%  Similarity=0.205  Sum_probs=54.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+........+        ..+       ...++..++.+ +..||..|++|+|++|.||+++.+|++.++
T Consensus        75 ~e~~~gg~L~~~~~~~~~~~--------~~~-------~~~~~~qi~~a-l~~LH~~~ivH~dlkp~Nill~~~~~~kL~  138 (316)
T cd05592          75 MEYLNGGDLMFHIQSSGRFD--------EAR-------ARFYAAEIICG-LQFLHKKGIIYRDLKLDNVLLDKDGHIKIA  138 (316)
T ss_pred             EcCCCCCcHHHHHHHcCCCC--------HHH-------HHHHHHHHHHH-HHHHHHCCEEeCCCCHHHeEECCCCCEEEc
Confidence            89999999987765322111        111       22345555554 788999999999999999999999999999


Q ss_pred             ecccccccc
Q 013370           81 DFGLLCRME   89 (444)
Q Consensus        81 DFGmv~~L~   89 (444)
                      |||+.....
T Consensus       139 Dfg~a~~~~  147 (316)
T cd05592         139 DFGMCKENM  147 (316)
T ss_pred             cCcCCeECC
Confidence            999987653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=98.56  E-value=3.6e-07  Score=92.40  Aligned_cols=113  Identities=15%  Similarity=0.125  Sum_probs=72.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+.|+.|.+........+        ...       ...++..++.+ +..++..|++|+|++|+||+++.+|.+.++
T Consensus       110 ~Ey~~~g~L~~~i~~~~~~~--------~~~-------~~~~~~qi~~a-L~~LH~~~ivHrDLkp~NILl~~~~~ikL~  173 (340)
T PTZ00426        110 LEFVIGGEFFTFLRRNKRFP--------NDV-------GCFYAAQIVLI-FEYLQSLNIVYRDLKPENLLLDKDGFIKMT  173 (340)
T ss_pred             EeCCCCCcHHHHHHHcCCCC--------HHH-------HHHHHHHHHHH-HHHHHHCCeEccCCCHHHEEECCCCCEEEe
Confidence            79999999988775432221        111       12345555544 788999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCH-HHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDW-QSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~-~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||+...++..... ..        +.. ....+.+...+ .....|++.+.--+..++.
T Consensus       174 DFG~a~~~~~~~~~-~~--------gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~ell~  223 (340)
T PTZ00426        174 DFGFAKVVDTRTYT-LC--------GTPEYIAPEILLNVG-HGKAADWWTLGIFIYEILV  223 (340)
T ss_pred             cCCCCeecCCCcce-ec--------CChhhcCHHHHhCCC-CCccccccchhhHHHHHhc
Confidence            99998877543211 11        111 11234443322 3345677766655555543

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=98.55  E-value=2.3e-07  Score=92.45  Aligned_cols=73  Identities=21%  Similarity=0.237  Sum_probs=55.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.+.+.......++        ++       ....++..++.+ +..+|..|++|+|++|.||+++.+|++.++
T Consensus        84 ~e~~~~g~L~~~l~~~~~~~--------~~-------~~~~~~~qi~~~-l~~lH~~~ivHrDlkp~Nili~~~~~~kl~  147 (332)
T cd05614          84 LDYVSGGEMFTHLYQRDNFS--------ED-------EVRFYSGEIILA-LEHLHKLGIVYRDIKLENILLDSEGHVVLT  147 (332)
T ss_pred             EeCCCCCcHHHHHHHcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCcEecCCCHHHeEECCCCCEEEe
Confidence            79999999888765332222        11       123445555555 788999999999999999999999999999


Q ss_pred             ecccccccc
Q 013370           81 DFGLLCRME   89 (444)
Q Consensus        81 DFGmv~~L~   89 (444)
                      |||+...+.
T Consensus       148 DfG~~~~~~  156 (332)
T cd05614         148 DFGLSKEFL  156 (332)
T ss_pred             eCcCCcccc
Confidence            999987653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.55  E-value=1e-07  Score=88.87  Aligned_cols=69  Identities=30%  Similarity=0.427  Sum_probs=53.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.++.+......           .        ....++..+.. .+.++|..|++|+|+||+||+++ +|++.++
T Consensus        78 ~e~~~G~~L~~~~~~~~-----------~--------~~~~i~~~i~~-~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~li  136 (211)
T PRK14879         78 MEYIEGEPLKDLINSNG-----------M--------EELELSREIGR-LVGKLHSAGIIHGDLTTSNMILS-GGKIYLI  136 (211)
T ss_pred             EEEeCCcCHHHHHHhcc-----------H--------HHHHHHHHHHH-HHHHHHhCCcccCCCCcccEEEE-CCCEEEE
Confidence            79999999988764210           0        12245554443 58899999999999999999999 8999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||++..-++
T Consensus       137 Df~~a~~~~~  146 (211)
T PRK14879        137 DFGLAEFSKD  146 (211)
T ss_pred             ECCcccCCCc
Confidence            9999876543

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=98.55  E-value=2.9e-07  Score=91.62  Aligned_cols=71  Identities=21%  Similarity=0.232  Sum_probs=53.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+.......        +++.+       ...++..++.+ +..+|..|++|+|++|.||+++.+|.+.++
T Consensus        80 ~E~~~~g~L~~~~~~~~~--------~~~~~-------~~~~~~qi~~a-l~~lH~~~ivH~dlkp~Nill~~~~~~kL~  143 (324)
T cd05587          80 MEYVNGGDLMYHIQQVGK--------FKEPH-------AVFYAAEIAIG-LFFLHSKGIIYRDLKLDNVMLDAEGHIKIA  143 (324)
T ss_pred             EcCCCCCcHHHHHHHcCC--------CCHHH-------HHHHHHHHHHH-HHHHHHCCeEecCCCHHHeEEcCCCCEEEe
Confidence            899999999877643211        11111       12344444444 788999999999999999999999999999


Q ss_pred             ecccccc
Q 013370           81 DFGLLCR   87 (444)
Q Consensus        81 DFGmv~~   87 (444)
                      |||+...
T Consensus       144 Dfg~~~~  150 (324)
T cd05587         144 DFGMCKE  150 (324)
T ss_pred             ecCccee
Confidence            9998764

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=98.53  E-value=3.2e-07  Score=91.86  Aligned_cols=72  Identities=26%  Similarity=0.163  Sum_probs=54.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.+.+........+        ..+       ...++..++.+ +..||..|++|+|++|.||+++.+|.+.+.
T Consensus        74 ~Ey~~~g~L~~~l~~~~~l~--------~~~-------~~~~~~qi~~a-L~~LH~~~ivHrDikp~NIll~~~~~~kL~  137 (328)
T cd05593          74 MEYVNGGELFFHLSRERVFS--------EDR-------TRFYGAEIVSA-LDYLHSGKIVYRDLKLENLMLDKDGHIKIT  137 (328)
T ss_pred             EeCCCCCCHHHHHHhcCCCC--------HHH-------HHHHHHHHHHH-HHHHHhCCeEecccCHHHeEECCCCcEEEe
Confidence            79999999877654321111        111       22455555555 788999999999999999999999999999


Q ss_pred             eccccccc
Q 013370           81 DFGLLCRM   88 (444)
Q Consensus        81 DFGmv~~L   88 (444)
                      |||+....
T Consensus       138 DfG~~~~~  145 (328)
T cd05593         138 DFGLCKEG  145 (328)
T ss_pred             cCcCCccC
Confidence            99998754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=98.52  E-value=3.9e-07  Score=90.24  Aligned_cols=72  Identities=18%  Similarity=0.172  Sum_probs=54.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+........+        ...       ...++..++.+ +..+|..|++|+|++|.||+++.+|.+.++
T Consensus        72 ~e~~~~g~L~~~l~~~~~~~--------~~~-------~~~~~~qi~~~-l~~lH~~~i~HrDlkp~Nili~~~~~~kl~  135 (312)
T cd05585          72 LAFINGGELFHHLQREGRFD--------LSR-------ARFYTAELLCA-LENLHKFNVIYRDLKPENILLDYQGHIALC  135 (312)
T ss_pred             EcCCCCCcHHHHHHhcCCCC--------HHH-------HHHHHHHHHHH-HHHHHhCCeEeCCCCHHHeEECCCCcEEEE
Confidence            79999999988765322111        111       12345555554 788999999999999999999999999999


Q ss_pred             eccccccc
Q 013370           81 DFGLLCRM   88 (444)
Q Consensus        81 DFGmv~~L   88 (444)
                      |||+....
T Consensus       136 Dfg~~~~~  143 (312)
T cd05585         136 DFGLCKLN  143 (312)
T ss_pred             ECcccccC
Confidence            99998754

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=98.52  E-value=3.6e-07  Score=90.99  Aligned_cols=72  Identities=19%  Similarity=0.191  Sum_probs=53.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+.|+.+.+........+        ..+       ...++..++.+ +..+|..|++|+|++|.||+++.+|.+.++
T Consensus        75 ~e~~~~~~L~~~l~~~~~~~--------~~~-------~~~~~~qi~~a-l~~lH~~givH~Dlkp~NIll~~~~~~kL~  138 (325)
T cd05604          75 LDFVNGGELFFHLQRERSFP--------EPR-------ARFYAAEIASA-LGYLHSINIVYRDLKPENILLDSQGHVVLT  138 (325)
T ss_pred             EcCCCCCCHHHHHHHcCCCC--------HHH-------HHHHHHHHHHH-HHHHHHCCeeecCCCHHHeEECCCCCEEEe
Confidence            79999999876654321111        111       22445555555 788999999999999999999999999999


Q ss_pred             eccccccc
Q 013370           81 DFGLLCRM   88 (444)
Q Consensus        81 DFGmv~~L   88 (444)
                      |||+....
T Consensus       139 DfG~~~~~  146 (325)
T cd05604         139 DFGLCKEG  146 (325)
T ss_pred             ecCCcccC
Confidence            99997653

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=98.52  E-value=6.2e-07  Score=92.81  Aligned_cols=131  Identities=15%  Similarity=0.151  Sum_probs=88.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccC------
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS------   74 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~D------   74 (444)
                      ||||+|+.|++++..+++.+++               ..+.++.++.. .++-|++.+++|+|++|-|||++.+      
T Consensus        88 MEyC~gGDLs~yi~~~~~l~e~---------------t~r~Fm~QLA~-alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~  151 (429)
T KOG0595|consen   88 MEYCNGGDLSDYIRRRGRLPEA---------------TARHFMQQLAS-ALQFLHENNIIHRDLKPQNILLSTTARNDTS  151 (429)
T ss_pred             EEeCCCCCHHHHHHHcCCCCHH---------------HHHHHHHHHHH-HHHHHHHCCeeeccCCcceEEeccCCCCCCC
Confidence            9999999999999876544310               11234444433 3778899999999999999999875      


Q ss_pred             CcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHhchhccCCCCcccHHH
Q 013370           75 GQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSR  154 (444)
Q Consensus        75 GrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~~~~~~~~l~~~~f~~  154 (444)
                      -.+.+-|||+...+.+..       +.+.+++-.--+|-.+...+-.+...|.+.+..-+...+...   .+...-+..+
T Consensus       152 ~~LKIADFGfAR~L~~~~-------~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~---~Pf~a~t~~e  221 (429)
T KOG0595|consen  152 PVLKIADFGFARFLQPGS-------MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGK---PPFDAETPKE  221 (429)
T ss_pred             ceEEecccchhhhCCchh-------HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCC---CCccccCHHH
Confidence            358899999999998643       223334444444444444556667789998887777666432   3444445555


Q ss_pred             HHH
Q 013370          155 VLG  157 (444)
Q Consensus       155 ll~  157 (444)
                      +..
T Consensus       222 L~~  224 (429)
T KOG0595|consen  222 LLL  224 (429)
T ss_pred             HHH
Confidence            543

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=98.51  E-value=5.3e-07  Score=89.72  Aligned_cols=71  Identities=23%  Similarity=0.174  Sum_probs=53.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+.|+.|.+........+        ..+       ...++..++.+ +..+|..|++|+|++|.||+++.+|.+.++
T Consensus        75 ~E~~~~g~L~~~i~~~~~~~--------~~~-------~~~~~~qi~~~-l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~  138 (316)
T cd05620          75 MEFLNGGDLMFHIQDKGRFD--------LYR-------ATFYAAEIVCG-LQFLHSKGIIYRDLKLDNVMLDRDGHIKIA  138 (316)
T ss_pred             ECCCCCCcHHHHHHHcCCCC--------HHH-------HHHHHHHHHHH-HHHHHHCCeEecCCCHHHeEECCCCCEEeC
Confidence            89999999887764322111        111       12344555554 788999999999999999999999999999


Q ss_pred             ecccccc
Q 013370           81 DFGLLCR   87 (444)
Q Consensus        81 DFGmv~~   87 (444)
                      |||+...
T Consensus       139 Dfg~~~~  145 (316)
T cd05620         139 DFGMCKE  145 (316)
T ss_pred             ccCCCee
Confidence            9998764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=98.50  E-value=4.5e-07  Score=90.51  Aligned_cols=74  Identities=28%  Similarity=0.337  Sum_probs=56.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.++......++        +.+       ...++..++.+ +..+|..|++|+|++|.||+++.+|.+.++
T Consensus        80 ~e~~~g~~L~~~l~~~~~l~--------~~~-------~~~~~~qi~~~-l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~  143 (333)
T cd05600          80 MEYVPGGDFRTLLNNLGVLS--------EDH-------ARFYMAEMFEA-VDALHELGYIHRDLKPENFLIDASGHIKLT  143 (333)
T ss_pred             EeCCCCCCHHHHHHHcCCCC--------HHH-------HHHHHHHHHHH-HHHHHHCCccccCCCHHHEEECCCCCEEEE
Confidence            79999999999875332211        111       12344444444 788999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+......
T Consensus       144 Dfg~a~~~~~  153 (333)
T cd05600         144 DFGLSKGIVT  153 (333)
T ss_pred             eCcCCccccc
Confidence            9999876654

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.50  E-value=4.5e-07  Score=80.65  Aligned_cols=76  Identities=29%  Similarity=0.449  Sum_probs=58.2

Q ss_pred             CCCcCCCCcccHHhhcC-CCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEcc-CCcEE
Q 013370            1 MEWMVGESPTDLISLST-GSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTS-SGQIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~-G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~-DGrLv   78 (444)
                      |||++|.++.++..... ..        +.+       ....++..++++ +..++..|++|+|+||+||++++ ++++.
T Consensus        70 ~e~~~~~~l~~~~~~~~~~~--------~~~-------~~~~~~~~l~~~-l~~lh~~~~~H~dl~~~ni~~~~~~~~~~  133 (215)
T cd00180          70 MEYCEGGSLKDLLKENEGKL--------SED-------EILRILLQILEG-LEYLHSNGIIHRDLKPENILLDSDNGKVK  133 (215)
T ss_pred             EecCCCCcHHHHHHhccCCC--------CHH-------HHHHHHHHHHHH-HHHHHhCCeeccCCCHhhEEEeCCCCcEE
Confidence            68999999988865421 11        111       223455555555 68899999999999999999999 89999


Q ss_pred             EEecccccccchhh
Q 013370           79 FLDFGLLCRMERKH   92 (444)
Q Consensus        79 lLDFGmv~~L~~~~   92 (444)
                      ++|||.+...+...
T Consensus       134 l~d~~~~~~~~~~~  147 (215)
T cd00180         134 LADFGLSKLLTSDK  147 (215)
T ss_pred             EecCCceEEccCCc
Confidence            99999999887654

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=98.49  E-value=6.4e-07  Score=88.00  Aligned_cols=70  Identities=31%  Similarity=0.335  Sum_probs=52.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|++|.++......+        +++.       ...++..++. .+..+|..|++|+|+||+||+++.+|.+.++
T Consensus        80 ~e~~~g~~L~~~l~~~~~~--------~~~~-------~~~~~~~i~~-~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~  143 (305)
T cd05609          80 MEYVEGGDCATLLKNIGAL--------PVDM-------ARMYFAETVL-ALEYLHNYGIVHRDLKPDNLLITSMGHIKLT  143 (305)
T ss_pred             EecCCCCcHHHHHHHcCCC--------CHHH-------HHHHHHHHHH-HHHHHHHCCccccCCchHHEEECCCCCEEEe
Confidence            7999999998887532111        1111       1234444443 4788999999999999999999999999999


Q ss_pred             eccccc
Q 013370           81 DFGLLC   86 (444)
Q Consensus        81 DFGmv~   86 (444)
                      |||+..
T Consensus       144 dfg~~~  149 (305)
T cd05609         144 DFGLSK  149 (305)
T ss_pred             eCCCcc
Confidence            999865

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=98.49  E-value=3.4e-07  Score=104.01  Aligned_cols=118  Identities=22%  Similarity=0.258  Sum_probs=85.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+.|+.|-.+.+--..+|            -+++    ++-..-+-..+..+|.-|++|+|.+|.|+|++.+|.|.|-
T Consensus       154 MdY~pGGDlltLlSk~~~~p------------E~~A----rFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLA  217 (1317)
T KOG0612|consen  154 MDYMPGGDLLTLLSKFDRLP------------EDWA----RFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLA  217 (1317)
T ss_pred             EecccCchHHHHHhhcCCCh------------HHHH----HHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeec
Confidence            99999999988876321122            1232    3333333345788999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhc----CCCCCCCChHHHHHHHHHHH
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEM----DVVRPGTNTLRVTMDLEDAL  138 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~l----G~l~~~~d~~~~~~~L~~~l  138 (444)
                      |||.|-.++.+   +.....+++-.-||=. .+.+..+    |...++.|-+.+.--++.++
T Consensus       218 DFGsClkm~~d---G~V~s~~aVGTPDYIS-PEvLqs~~~~~g~yG~ecDwWSlGV~~YEMl  275 (1317)
T KOG0612|consen  218 DFGSCLKMDAD---GTVRSSVAVGTPDYIS-PEVLQSQGDGKGEYGRECDWWSLGVFMYEML  275 (1317)
T ss_pred             cchhHHhcCCC---CcEEeccccCCCCccC-HHHHHhhcCCccccCCccchhhhHHHHHHHH
Confidence            99999999753   3445566777788733 4555544    55677889888776666655

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=98.49  E-value=3.2e-07  Score=91.55  Aligned_cols=72  Identities=25%  Similarity=0.176  Sum_probs=53.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+........+        +.       ....++..++.+ +..||..|++|+|++|.||+++.+|.+.++
T Consensus        74 ~E~~~~~~L~~~l~~~~~~~--------~~-------~~~~~~~qi~~a-L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~  137 (323)
T cd05595          74 MEYANGGELFFHLSRERVFT--------EE-------RARFYGAEIVSA-LEYLHSRDVVYRDIKLENLMLDKDGHIKIT  137 (323)
T ss_pred             EeCCCCCcHHHHHHHcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCeEecCCCHHHEEEcCCCCEEec
Confidence            79999999877654322111        11       123455555555 788999999999999999999999999999


Q ss_pred             eccccccc
Q 013370           81 DFGLLCRM   88 (444)
Q Consensus        81 DFGmv~~L   88 (444)
                      |||.+...
T Consensus       138 Dfg~~~~~  145 (323)
T cd05595         138 DFGLCKEG  145 (323)
T ss_pred             ccHHhccc
Confidence            99987653

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=98.48  E-value=7.8e-07  Score=89.15  Aligned_cols=150  Identities=18%  Similarity=0.231  Sum_probs=103.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.+-.++.-.+..+        +.        ..++-..-+-+.++.||..+++++|++|.|||++.+|.|.+.
T Consensus       123 meyv~GGElFS~Lrk~~rF~--------e~--------~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKit  186 (355)
T KOG0616|consen  123 MEYVPGGELFSYLRKSGRFS--------EP--------HARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKIT  186 (355)
T ss_pred             EeccCCccHHHHHHhcCCCC--------ch--------hHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEE
Confidence            89999999998876543332        11        123444445566899999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHhchhccCCCCcccHHHHHHHHH
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIW  160 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~~~~~~~~l~~~~f~~ll~~l~  160 (444)
                      |||..++++..+ ..+        ++.++-++-..+..--....+|-+++.--+.+++..+   .+...-+-    .++.
T Consensus       187 DFGFAK~v~~rT-~Tl--------CGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~---pPF~~~~~----~~iY  250 (355)
T KOG0616|consen  187 DFGFAKRVSGRT-WTL--------CGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGY---PPFYDDNP----IQIY  250 (355)
T ss_pred             eccceEEecCcE-EEe--------cCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCC---CCCcCCCh----HHHH
Confidence            999999998863 333        3556666544444433445678888887777777654   23322222    3444


Q ss_pred             HHHHhCCcCCChHHHHHHHHHH
Q 013370          161 SIALKYHFRMPPYYTLVLRSLA  182 (444)
Q Consensus       161 ~l~~~~~~~vP~~~~li~Ral~  182 (444)
                      +-.....+++|++|..-.|.++
T Consensus       251 ~KI~~~~v~fP~~fs~~~kdLl  272 (355)
T KOG0616|consen  251 EKILEGKVKFPSYFSSDAKDLL  272 (355)
T ss_pred             HHHHhCcccCCcccCHHHHHHH
Confidence            4555667788888776666554

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=98.48  E-value=3.8e-07  Score=90.92  Aligned_cols=72  Identities=24%  Similarity=0.135  Sum_probs=53.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+........        ++.+       ...++..++.+ +..+|..|++|+|++|.||+++.+|.+.++
T Consensus        74 ~e~~~~~~L~~~l~~~~~~--------~~~~-------~~~~~~qi~~~-L~~lH~~~ivHrDlkp~NIll~~~~~~kl~  137 (323)
T cd05571          74 MEYANGGELFFHLSRERVF--------SEDR-------ARFYGAEIVSA-LGYLHSCDVVYRDLKLENLMLDKDGHIKIT  137 (323)
T ss_pred             EeCCCCCcHHHHHHHcCCC--------CHHH-------HHHHHHHHHHH-HHHHHhCCeEeCCCCHHHEEECCCCCEEEe
Confidence            7999999987776532111        1111       22344555554 788999999999999999999999999999


Q ss_pred             eccccccc
Q 013370           81 DFGLLCRM   88 (444)
Q Consensus        81 DFGmv~~L   88 (444)
                      |||+....
T Consensus       138 DfG~a~~~  145 (323)
T cd05571         138 DFGLCKEG  145 (323)
T ss_pred             eCCCCccc
Confidence            99987653

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=98.47  E-value=6.5e-07  Score=89.16  Aligned_cols=71  Identities=24%  Similarity=0.171  Sum_probs=52.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|...... ..+        +..+       ...++..++.+ +..+|..|++|+|++|.||+++++|.+.++
T Consensus        81 ~E~~~~~~L~~~~~~-~~l--------~~~~-------~~~~~~qi~~a-l~~lH~~~ivHrdlkp~Nill~~~~~~kL~  143 (324)
T cd05589          81 MEYAAGGDLMMHIHT-DVF--------SEPR-------AVFYAACVVLG-LQYLHENKIVYRDLKLDNLLLDTEGFVKIA  143 (324)
T ss_pred             EcCCCCCcHHHHhhc-CCC--------CHHH-------HHHHHHHHHHH-HHHHHhCCeEecCCCHHHeEECCCCcEEeC
Confidence            799999988765431 111        1111       22455555554 688999999999999999999999999999


Q ss_pred             eccccccc
Q 013370           81 DFGLLCRM   88 (444)
Q Consensus        81 DFGmv~~L   88 (444)
                      |||+....
T Consensus       144 Dfg~~~~~  151 (324)
T cd05589         144 DFGLCKEG  151 (324)
T ss_pred             cccCCccC
Confidence            99987654

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=98.47  E-value=3.3e-07  Score=91.29  Aligned_cols=72  Identities=25%  Similarity=0.161  Sum_probs=52.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHH-cCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLE-TGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~-~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      |||++|+.|.+........+        .++       ...++..++.+ +..+|. .|++|+|++|.||+++.+|.+.+
T Consensus        74 ~E~~~~~~L~~~l~~~~~l~--------~~~-------~~~~~~qi~~a-L~~lH~~~~ivHrDikp~NIll~~~~~~kL  137 (325)
T cd05594          74 MEYANGGELFFHLSRERVFS--------EDR-------ARFYGAEIVSA-LDYLHSEKNVVYRDLKLENLMLDKDGHIKI  137 (325)
T ss_pred             EeCCCCCcHHHHHHhcCCCC--------HHH-------HHHHHHHHHHH-HHHHHhcCCEEecCCCCCeEEECCCCCEEE
Confidence            89999999877654322111        111       22344444444 778886 79999999999999999999999


Q ss_pred             Eeccccccc
Q 013370           80 LDFGLLCRM   88 (444)
Q Consensus        80 LDFGmv~~L   88 (444)
                      +|||+....
T Consensus       138 ~Dfg~~~~~  146 (325)
T cd05594         138 TDFGLCKEG  146 (325)
T ss_pred             ecCCCCeec
Confidence            999987653

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=98.46  E-value=8.2e-07  Score=90.08  Aligned_cols=75  Identities=23%  Similarity=0.400  Sum_probs=56.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+........+        +.+       ...++..++. .+..+|..|++|+|++|.||+++.+|.+.++
T Consensus        80 ~E~~~gg~L~~~l~~~~~l~--------~~~-------~~~~~~qi~~-aL~~lH~~givHrDlKp~NILi~~~~~vkL~  143 (363)
T cd05628          80 MEFLPGGDMMTLLMKKDTLT--------EEE-------TQFYIAETVL-AIDSIHQLGFIHRDIKPDNLLLDSKGHVKLS  143 (363)
T ss_pred             EcCCCCCcHHHHHHhcCCCC--------HHH-------HHHHHHHHHH-HHHHHHhCCeEecCCCHHHeEECCCCCEEEe
Confidence            89999999988875432221        111       1234444444 3788999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||++..+...
T Consensus       144 DFGla~~~~~~  154 (363)
T cd05628         144 DFGLCTGLKKA  154 (363)
T ss_pred             eccCccccccc
Confidence            99999877654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=98.45  E-value=1e-06  Score=81.83  Aligned_cols=77  Identities=27%  Similarity=0.463  Sum_probs=58.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.++.....+       .++..       ....++..++++ +..++..|++|+|++|.||+++++|.+.++
T Consensus        76 ~e~~~~~~L~~~~~~~~~-------~~~~~-------~~~~i~~~i~~~-l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~  140 (253)
T cd05122          76 MEFCSGGSLKDLLKSTNQ-------TLTES-------QIAYVCKELLKG-LEYLHSNGIIHRDIKAANILLTSDGEVKLI  140 (253)
T ss_pred             EecCCCCcHHHHHhhcCC-------CCCHH-------HHHHHHHHHHHH-HHHhhcCCEecCCCCHHHEEEccCCeEEEe
Confidence            689999999988754310       01111       123455666655 788999999999999999999999999999


Q ss_pred             ecccccccchhh
Q 013370           81 DFGLLCRMERKH   92 (444)
Q Consensus        81 DFGmv~~L~~~~   92 (444)
                      |||.+..+++..
T Consensus       141 d~~~~~~~~~~~  152 (253)
T cd05122         141 DFGLSAQLSDTK  152 (253)
T ss_pred             eccccccccccc
Confidence            999998887654

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.45  E-value=2.2e-07  Score=100.48  Aligned_cols=72  Identities=22%  Similarity=0.393  Sum_probs=57.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      ||||.|+.+-.++- +.|+=               .+.+.++--.-+.|..+.++.-||+|+|++|.||||+.||.|.|-
T Consensus       708 MdYIPGGDmMSLLI-rmgIF---------------eE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLT  771 (1034)
T KOG0608|consen  708 MDYIPGGDMMSLLI-RMGIF---------------EEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLT  771 (1034)
T ss_pred             EeccCCccHHHHHH-HhccC---------------HHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeee
Confidence            89999998888764 33431               122345555567788899999999999999999999999999999


Q ss_pred             eccccccc
Q 013370           81 DFGLLCRM   88 (444)
Q Consensus        81 DFGmv~~L   88 (444)
                      |||+|.-+
T Consensus       772 DFGLCTGf  779 (1034)
T KOG0608|consen  772 DFGLCTGF  779 (1034)
T ss_pred             eccccccc
Confidence            99999754

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=98.44  E-value=6.4e-07  Score=88.93  Aligned_cols=72  Identities=19%  Similarity=0.187  Sum_probs=53.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.+........+        +.       ....++..++.+ +..+|..|++|+|++|.||+++.+|++.++
T Consensus        75 ~e~~~~~~L~~~l~~~~~~~--------~~-------~~~~~~~qi~~~-L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~  138 (321)
T cd05603          75 LDYVNGGELFFHLQRERCFL--------EP-------RARFYAAEVASA-IGYLHSLNIIYRDLKPENILLDSQGHVVLT  138 (321)
T ss_pred             EcCCCCCCHHHHHHHcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCeEeccCCHHHeEECCCCCEEEc
Confidence            79999999876654321111        11       122345555554 788999999999999999999999999999


Q ss_pred             eccccccc
Q 013370           81 DFGLLCRM   88 (444)
Q Consensus        81 DFGmv~~L   88 (444)
                      |||+....
T Consensus       139 Dfg~~~~~  146 (321)
T cd05603         139 DFGLCKEG  146 (321)
T ss_pred             cCCCCccC
Confidence            99987653

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.44  E-value=5.8e-07  Score=93.16  Aligned_cols=144  Identities=18%  Similarity=0.217  Sum_probs=98.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccC-CcEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS-GQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~D-GrLvl   79 (444)
                      |||+.|+.|-+...-+..++        +   .++    ..+-++++.+ +..+|..|++|+|++|.|++++.+ |.+.+
T Consensus        99 mEy~~gGdL~~~i~~~g~l~--------E---~~a----r~~F~Qlisa-v~y~H~~gi~HRDLK~ENilld~~~~~~Kl  162 (370)
T KOG0583|consen   99 MEYCSGGDLFDYIVNKGRLK--------E---DEA----RKYFRQLISA-VAYCHSRGIVHRDLKPENILLDGNEGNLKL  162 (370)
T ss_pred             EEecCCccHHHHHHHcCCCC--------h---HHH----HHHHHHHHHH-HHHHHhCCEeeCCCCHHHEEecCCCCCEEE
Confidence            89999999888877532111        1   111    2445555555 777899999999999999999999 99999


Q ss_pred             Eecccccccc-h-hhHHhHHHHHHHHHhCCHHHHHHHHHhcC-CCCCCCChHHHHHHHHHHHhchhccCCCCcccHHHHH
Q 013370           80 LDFGLLCRME-R-KHQFAMLASIVHIVNGDWQSLVHSLTEMD-VVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVL  156 (444)
Q Consensus        80 LDFGmv~~L~-~-~~R~~l~~ll~alv~~D~~~la~~l~~lG-~l~~~~d~~~~~~~L~~~l~~~~~~~~l~~~~f~~ll  156 (444)
                      .|||.....+ + +.-...+.      ...| ...|.+..-+ +.....|++.+.--|..++...   .+..+-+...+ 
T Consensus       163 ~DFG~s~~~~~~~~~l~t~cG------sp~Y-~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~---~PF~d~~~~~l-  231 (370)
T KOG0583|consen  163 SDFGLSAISPGEDGLLKTFCG------SPAY-AAPEVLSGKGTYSGKAADVWSLGVILYVLLCGR---LPFDDSNVPNL-  231 (370)
T ss_pred             eccccccccCCCCCcccCCCC------Cccc-CCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCC---CCCCCccHHHH-
Confidence            9999998884 2 22222222      1233 3477887777 7788899999888887776543   23333333333 


Q ss_pred             HHHHHHHHhCCcCCChHH
Q 013370          157 GKIWSIALKYHFRMPPYY  174 (444)
Q Consensus       157 ~~l~~l~~~~~~~vP~~~  174 (444)
                         .....+..+.+|.++
T Consensus       232 ---~~ki~~~~~~~p~~~  246 (370)
T KOG0583|consen  232 ---YRKIRKGEFKIPSYL  246 (370)
T ss_pred             ---HHHHhcCCccCCCCc
Confidence               333567777888776

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.43  E-value=2.6e-07  Score=82.75  Aligned_cols=39  Identities=23%  Similarity=0.346  Sum_probs=32.9

Q ss_pred             HHHHHHcC-----ccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           51 LVQLLETG-----ILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        51 L~QLl~~G-----fFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      +..++..+     ++|+|+||+||+++ +|++.++|||.++.-++
T Consensus        96 l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~~~~  139 (170)
T cd05151          96 LKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGMNDP  139 (170)
T ss_pred             HHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccCCCh
Confidence            56677776     59999999999999 78999999999886543

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=98.43  E-value=5.2e-07  Score=90.09  Aligned_cols=75  Identities=27%  Similarity=0.389  Sum_probs=57.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.+........+        ..       ....++..++.+ +..||..|++|+|++|.||+++.+|.+.++
T Consensus        80 ~e~~~~~~L~~~l~~~~~l~--------~~-------~~~~i~~qi~~a-L~~LH~~giiH~Dlkp~NIll~~~~~~kL~  143 (350)
T cd05573          80 MEYMPGGDLMNLLIRKDVFP--------EE-------TARFYIAELVLA-LDSVHKLGFIHRDIKPDNILIDADGHIKLA  143 (350)
T ss_pred             EcCCCCCCHHHHHHHcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCeeccCCCHHHeEECCCCCEEee
Confidence            79999999988876432221        11       122445555555 889999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...+...
T Consensus       144 Dfg~~~~~~~~  154 (350)
T cd05573         144 DFGLCKKMNKA  154 (350)
T ss_pred             cCCCCccCccc
Confidence            99998877654

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.42  E-value=3.5e-07  Score=96.14  Aligned_cols=90  Identities=18%  Similarity=0.316  Sum_probs=71.9

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcC
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMD  119 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG  119 (444)
                      ..++.++++. |..+|.+||||+|++|.|||+...--|.+-|||++.++.....++  +    -+.-.|.+..|.+.+-|
T Consensus       113 rnim~QilqG-L~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYT--e----YVSTRWYRAPEvLLrs~  185 (538)
T KOG0661|consen  113 RNIMYQILQG-LAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPPYT--E----YVSTRWYRAPEVLLRSG  185 (538)
T ss_pred             HHHHHHHHHH-HHHHHhcCcccccCChhheEecccceeEecccccccccccCCCcc--h----hhhcccccchHHhhhcc
Confidence            3455555544 788899999999999999999988899999999999987654432  2    23467888999999999


Q ss_pred             CCCCCCChHHHHHHHHH
Q 013370          120 VVRPGTNTLRVTMDLED  136 (444)
Q Consensus       120 ~l~~~~d~~~~~~~L~~  136 (444)
                      +.....|++++.--+.+
T Consensus       186 ~Ys~pvD~wA~GcI~aE  202 (538)
T KOG0661|consen  186 YYSSPVDMWAVGCIMAE  202 (538)
T ss_pred             ccCCchHHHHHHHHHHH
Confidence            99999999987654444

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=98.42  E-value=1.4e-06  Score=84.75  Aligned_cols=75  Identities=27%  Similarity=0.264  Sum_probs=56.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.+|.+.......++        +..       ...++..++++ +..+|..|++|+|+||.||+++.+|++.++
T Consensus        80 ~e~~~~~~L~~~~~~~~~l~--------~~~-------~~~~~~qil~~-l~~lH~~~i~H~dl~p~nili~~~~~~kl~  143 (290)
T cd05580          80 MEYVPGGELFSHLRKSGRFP--------EPV-------ARFYAAQVVLA-LEYLHSLDIVYRDLKPENLLLDSDGYIKIT  143 (290)
T ss_pred             EecCCCCCHHHHHHHcCCCC--------HHH-------HHHHHHHHHHH-HHHHHHCCEecCCCCHHHEEECCCCCEEEe
Confidence            79999999988765432221        121       22344555554 678899999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...+...
T Consensus       144 dfg~~~~~~~~  154 (290)
T cd05580         144 DFGFAKRVKGR  154 (290)
T ss_pred             eCCCccccCCC
Confidence            99998877654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=98.42  E-value=6.8e-07  Score=89.10  Aligned_cols=72  Identities=21%  Similarity=0.251  Sum_probs=53.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.+........+        +.       ....++..++.+ +..+|..|++|+|++|.||+++.+|++.++
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~--------~~-------~~~~~~~qi~~~-l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~  142 (323)
T cd05584          79 LEYLSGGELFMHLEREGIFM--------ED-------TACFYLSEISLA-LEHLHQQGIIYRDLKPENILLDAQGHVKLT  142 (323)
T ss_pred             EeCCCCchHHHHHHHcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCeecCCCCHHHeEECCCCCEEEe
Confidence            79999999987765321111        11       112344444444 788999999999999999999999999999


Q ss_pred             eccccccc
Q 013370           81 DFGLLCRM   88 (444)
Q Consensus        81 DFGmv~~L   88 (444)
                      |||+....
T Consensus       143 Dfg~~~~~  150 (323)
T cd05584         143 DFGLCKES  150 (323)
T ss_pred             eCcCCeec
Confidence            99997653

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=98.41  E-value=4.8e-07  Score=88.07  Aligned_cols=42  Identities=19%  Similarity=0.314  Sum_probs=38.0

Q ss_pred             HHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           49 ATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        49 a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      ..+.++|..|++|+|+||+||+++++|++.++|||.+..-.+
T Consensus       153 ~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~~~~  194 (239)
T PRK01723        153 QLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRGELRTP  194 (239)
T ss_pred             HHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCcccCCC
Confidence            348899999999999999999999999999999999887553

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=98.40  E-value=7.7e-07  Score=89.77  Aligned_cols=75  Identities=23%  Similarity=0.395  Sum_probs=56.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+.|+.|.+...-....+        +.+       ...++..++.+ +..+|..|++|+|++|+||+++.+|.+.++
T Consensus        80 ~E~~~~g~L~~~l~~~~~l~--------~~~-------~~~~~~qi~~a-L~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~  143 (364)
T cd05599          80 MEYLPGGDMMTLLMKKDTFT--------EEE-------TRFYIAETILA-IDSIHKLGYIHRDIKPDNLLLDAKGHIKLS  143 (364)
T ss_pred             ECCCCCcHHHHHHHHcCCCC--------HHH-------HHHHHHHHHHH-HHHHHHCCeEeccCCHHHeEECCCCCEEEe
Confidence            89999999988765332221        111       22345555544 788999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...+...
T Consensus       144 Dfg~~~~~~~~  154 (364)
T cd05599         144 DFGLCTGLKKS  154 (364)
T ss_pred             ecccceecccc
Confidence            99998876543

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=98.40  E-value=4.5e-07  Score=89.89  Aligned_cols=74  Identities=22%  Similarity=0.246  Sum_probs=55.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+.......+        +.+       ....++..++.+ +..+|..|++|+|++|.||+++.+|.+.++
T Consensus        77 ~e~~~~~~L~~~l~~~~~l--------~~~-------~~~~~~~qi~~~-l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~  140 (318)
T cd05582          77 LDFLRGGDLFTRLSKEVMF--------TEE-------DVKFYLAELALA-LDHLHSLGIIYRDLKPENILLDEEGHIKLT  140 (318)
T ss_pred             EcCCCCCcHHHHHHHcCCC--------CHH-------HHHHHHHHHHHH-HHHHHHCCEecCCCCHHHeEECCCCcEEEe
Confidence            7999999988776432111        111       123455555555 788999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+......
T Consensus       141 Dfg~~~~~~~  150 (318)
T cd05582         141 DFGLSKESID  150 (318)
T ss_pred             eccCCcccCC
Confidence            9999876543

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=98.39  E-value=1.1e-06  Score=87.88  Aligned_cols=75  Identities=24%  Similarity=0.311  Sum_probs=55.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.++.....+       .+++.+       ...++..++.+ +..+|..|++|+|++|.||+++.+|++.++
T Consensus        80 ~e~~~g~~L~~~l~~~~~-------~~~~~~-------~~~~~~qi~~~-l~~lH~~~ivH~dlkp~Nill~~~~~~kl~  144 (331)
T cd05597          80 MDYYVGGDLLTLLSKFED-------RLPEDM-------ARFYLAEMVLA-IDSVHQLGYVHRDIKPDNVLLDKNGHIRLA  144 (331)
T ss_pred             EecCCCCcHHHHHHHhcC-------CCCHHH-------HHHHHHHHHHH-HHHHHhCCeEECCCCHHHEEECCCCCEEEE
Confidence            799999999988753211       011111       22344444444 788999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+..
T Consensus       145 Dfg~~~~~~~  154 (331)
T cd05597         145 DFGSCLRLLA  154 (331)
T ss_pred             ECCceeecCC
Confidence            9999876654

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=98.36  E-value=2.6e-06  Score=79.88  Aligned_cols=77  Identities=21%  Similarity=0.323  Sum_probs=58.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.+|.+........+        ..       ....++..++.+ +..++..|++|+|++|+||+++.+|.+.+.
T Consensus        78 ~e~~~~~~L~~~~~~~~~l~--------~~-------~~~~~~~~i~~~-l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~  141 (254)
T cd06627          78 LEYAENGSLRQIIKKFGPFP--------ES-------LVAVYVYQVLQG-LAYLHEQGVIHRDIKAANILTTKDGVVKLA  141 (254)
T ss_pred             EecCCCCcHHHHHHhccCCC--------HH-------HHHHHHHHHHHH-HHHHhhCCcccCCCCHHHEEECCCCCEEEe
Confidence            68999999988765321111        11       123556666665 578999999999999999999999999999


Q ss_pred             ecccccccchhhH
Q 013370           81 DFGLLCRMERKHQ   93 (444)
Q Consensus        81 DFGmv~~L~~~~R   93 (444)
                      |||....+.....
T Consensus       142 d~~~~~~~~~~~~  154 (254)
T cd06627         142 DFGVATKLNDVSK  154 (254)
T ss_pred             ccccceecCCCcc
Confidence            9999998876543

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=98.36  E-value=2e-06  Score=85.52  Aligned_cols=71  Identities=27%  Similarity=0.222  Sum_probs=53.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+........        +..+       ...++..++.+ +..+|..|++|+|++|.||+++.+|.+.+.
T Consensus        75 ~e~~~~~~L~~~~~~~~~l--------~~~~-------~~~~~~qi~~~-l~~LH~~~ivH~dlkp~Nill~~~~~~kl~  138 (318)
T cd05570          75 MEYVNGGDLMFHIQRSGRF--------DEPR-------ARFYAAEIVLG-LQFLHERGIIYRDLKLDNVLLDSEGHIKIA  138 (318)
T ss_pred             EcCCCCCCHHHHHHHcCCC--------CHHH-------HHHHHHHHHHH-HHHHHhCCeEccCCCHHHeEECCCCcEEec
Confidence            7999999988765432111        1221       22445555554 678899999999999999999999999999


Q ss_pred             ecccccc
Q 013370           81 DFGLLCR   87 (444)
Q Consensus        81 DFGmv~~   87 (444)
                      |||....
T Consensus       139 Dfg~~~~  145 (318)
T cd05570         139 DFGMCKE  145 (318)
T ss_pred             ccCCCee
Confidence            9998764

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=98.36  E-value=5.5e-07  Score=91.07  Aligned_cols=75  Identities=24%  Similarity=0.396  Sum_probs=56.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+........+        +..       ...++..++.+ +..+|..|++|+|++|.||+++.+|.+.++
T Consensus        80 ~E~~~gg~L~~~l~~~~~l~--------~~~-------~~~~~~qi~~~-L~~lH~~givHrDLkp~NIli~~~~~vkL~  143 (360)
T cd05627          80 MEFLPGGDMMTLLMKKDTLS--------EEA-------TQFYIAETVLA-IDAIHQLGFIHRDIKPDNLLLDAKGHVKLS  143 (360)
T ss_pred             EeCCCCccHHHHHHhcCCCC--------HHH-------HHHHHHHHHHH-HHHHHHCCeEccCCCHHHEEECCCCCEEEe
Confidence            89999999988865332222        111       12344444444 788999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||++..+...
T Consensus       144 DfG~~~~~~~~  154 (360)
T cd05627         144 DFGLCTGLKKA  154 (360)
T ss_pred             eccCCcccccc
Confidence            99998877543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=98.35  E-value=5.4e-07  Score=95.77  Aligned_cols=80  Identities=24%  Similarity=0.414  Sum_probs=59.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.+.-++....-++        +    ++.  ..-+++..  +...-||.+|++|+|++|.|+|++.+|.|.|-
T Consensus       220 MEylPGGD~mTLL~~~~~L~--------e----~~a--rfYiaE~v--lAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLS  283 (550)
T KOG0605|consen  220 MEYLPGGDMMTLLMRKDTLT--------E----DWA--RFYIAETV--LAIESIHQLGYIHRDIKPDNLLIDAKGHIKLS  283 (550)
T ss_pred             EEecCCccHHHHHHhcCcCc--------h----HHH--HHHHHHHH--HHHHHHHHcCcccccCChhheeecCCCCEeec
Confidence            99999999988876542222        1    111  11233322  23678999999999999999999999999999


Q ss_pred             ecccccccchhhHHhH
Q 013370           81 DFGLLCRMERKHQFAM   96 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l   96 (444)
                      |||++.-+....+..+
T Consensus       284 DFGLs~gl~~~~~~~~  299 (550)
T KOG0605|consen  284 DFGLSTGLDKKHRIES  299 (550)
T ss_pred             cccccchhhhhhhhhh
Confidence            9999988887776543

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=98.35  E-value=1.2e-06  Score=87.51  Aligned_cols=71  Identities=20%  Similarity=0.212  Sum_probs=53.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+........+        ..+       ...++..++.+ +..+|..|++|+|++|.||+++.+|.+.++
T Consensus        75 ~e~~~~~~L~~~~~~~~~l~--------~~~-------~~~~~~qi~~a-l~~lH~~~ivHrDlkp~Nili~~~~~~kl~  138 (327)
T cd05617          75 IEYVNGGDLMFHMQRQRKLP--------EEH-------ARFYAAEICIA-LNFLHERGIIYRDLKLDNVLLDADGHIKLT  138 (327)
T ss_pred             EeCCCCCcHHHHHHHcCCCC--------HHH-------HHHHHHHHHHH-HHHHHHCCeeccCCCHHHEEEeCCCCEEEe
Confidence            79999999877654322221        111       23455555555 788999999999999999999999999999


Q ss_pred             ecccccc
Q 013370           81 DFGLLCR   87 (444)
Q Consensus        81 DFGmv~~   87 (444)
                      |||+...
T Consensus       139 Dfg~~~~  145 (327)
T cd05617         139 DYGMCKE  145 (327)
T ss_pred             cccccee
Confidence            9998765

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=98.35  E-value=2.3e-06  Score=83.90  Aligned_cols=131  Identities=13%  Similarity=0.129  Sum_probs=73.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCc------hhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccC
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSST------HLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS   74 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~------~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~D   74 (444)
                      |||++|+.|.++........ .....      ......... .....++..++.+ +..+|..|++|+|++|.||+++.+
T Consensus        98 ~e~~~~~~L~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~i~~a-l~~lH~~~ivH~dlkp~Nill~~~  174 (304)
T cd05096          98 TEYMENGDLNQFLSSHHLDD-KEENGNDAVPPAHCLPAISY-SSLLHVALQIASG-MKYLSSLNFVHRDLATRNCLVGEN  174 (304)
T ss_pred             EecCCCCcHHHHHHhccccc-cccccccccccccccccccH-HHHHHHHHHHHHH-HHHHHHCCccccCcchhheEEcCC
Confidence            79999999998875431000 00000      000000010 1123455555554 788999999999999999999999


Q ss_pred             CcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHH
Q 013370           75 GQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDAL  138 (444)
Q Consensus        75 GrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l  138 (444)
                      |.+.+.|||....+...........  ......| ...+.+ ..+...+..|+..+.--+..++
T Consensus       175 ~~~kl~DfG~~~~~~~~~~~~~~~~--~~~~~~y-~aPE~~-~~~~~~~~~Dv~slG~~l~el~  234 (304)
T cd05096         175 LTIKIADFGMSRNLYAGDYYRIQGR--AVLPIRW-MAWECI-LMGKFTTASDVWAFGVTLWEIL  234 (304)
T ss_pred             ccEEECCCccceecccCceeEecCc--CCCCccc-cCHHHH-hcCCCCchhhhHHHHHHHHHHH
Confidence            9999999999876644321110000  0000011 112222 2344555678877766665554

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=98.33  E-value=1.5e-06  Score=92.11  Aligned_cols=77  Identities=19%  Similarity=0.210  Sum_probs=55.8

Q ss_pred             CCCcCCCCcccHHhhc--CCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEE
Q 013370            1 MEWMVGESPTDLISLS--TGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~--~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLv   78 (444)
                      |||++|+.|.+.....  ...+      +++.+       ...++..++. .+..+|..|++|+|+||.||+++++|.+.
T Consensus       144 ~E~~~gg~L~~~l~~~~~~~~~------l~~~~-------~~~i~~qi~~-aL~~lH~~~ivHrDlkp~NIll~~~~~~k  209 (478)
T PTZ00267        144 MEYGSGGDLNKQIKQRLKEHLP------FQEYE-------VGLLFYQIVL-ALDEVHSRKMMHRDLKSANIFLMPTGIIK  209 (478)
T ss_pred             EECCCCCCHHHHHHHHHhccCC------CCHHH-------HHHHHHHHHH-HHHHHHhCCEEECCcCHHhEEECCCCcEE
Confidence            8999999998865421  1111      11111       1234444443 47889999999999999999999999999


Q ss_pred             EEecccccccchh
Q 013370           79 FLDFGLLCRMERK   91 (444)
Q Consensus        79 lLDFGmv~~L~~~   91 (444)
                      ++|||+...+...
T Consensus       210 L~DFgla~~~~~~  222 (478)
T PTZ00267        210 LGDFGFSKQYSDS  222 (478)
T ss_pred             EEeCcCceecCCc
Confidence            9999999877653

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=98.33  E-value=2.5e-06  Score=80.04  Aligned_cols=83  Identities=20%  Similarity=0.168  Sum_probs=59.3

Q ss_pred             CCCcCCCCcccHHhhcCCCC-CCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLSTGSS-VDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~-~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      |||++|.+|.+......... ......++..       ....++..++.+ +..++..|++|+|++|.||+++.+|.+.+
T Consensus        75 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~a-l~~lH~~~i~H~di~p~nili~~~~~~~l  146 (262)
T cd00192          75 LEYMEGGDLLDYLRKSRPVFPSPEKSTLSLK-------DLLSFAIQIAKG-MEYLASKKFVHRDLAARNCLVGEDLVVKI  146 (262)
T ss_pred             EEeccCCcHHHHHhhccccccccccccCCHH-------HHHHHHHHHHHH-HHHHHcCCcccCccCcceEEECCCCcEEE
Confidence            78999999999875421000 0000011122       234566666666 68899999999999999999999999999


Q ss_pred             Eecccccccchh
Q 013370           80 LDFGLLCRMERK   91 (444)
Q Consensus        80 LDFGmv~~L~~~   91 (444)
                      .|||....+...
T Consensus       147 ~dfg~~~~~~~~  158 (262)
T cd00192         147 SDFGLSRDVYDD  158 (262)
T ss_pred             cccccccccccc
Confidence            999999888764

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=98.32  E-value=3e-06  Score=84.42  Aligned_cols=72  Identities=21%  Similarity=0.184  Sum_probs=54.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+........+        ..+       ...++..++.+ +..+|..|++|+|++|.||+++.+|.+.++
T Consensus        75 ~ey~~~g~L~~~l~~~~~~~--------~~~-------~~~~~~qi~~a-l~~LH~~~ivHrdikp~Nil~~~~~~~kl~  138 (316)
T cd05619          75 MEYLNGGDLMFHIQSCHKFD--------LPR-------ATFYAAEIICG-LQFLHSKGIVYRDLKLDNILLDTDGHIKIA  138 (316)
T ss_pred             EeCCCCCcHHHHHHHcCCCC--------HHH-------HHHHHHHHHHH-HHHHHhCCeEeCCCCHHHEEECCCCCEEEc
Confidence            79999999988765321111        111       12445555554 788999999999999999999999999999


Q ss_pred             eccccccc
Q 013370           81 DFGLLCRM   88 (444)
Q Consensus        81 DFGmv~~L   88 (444)
                      |||+....
T Consensus       139 Dfg~~~~~  146 (316)
T cd05619         139 DFGMCKEN  146 (316)
T ss_pred             cCCcceEC
Confidence            99987653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=98.31  E-value=2.9e-06  Score=82.60  Aligned_cols=74  Identities=18%  Similarity=0.287  Sum_probs=55.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+.......++        .++       ...++..++.+ +..+|..|++|+|.+|+||+++.+|.+.++
T Consensus        76 ~e~~~~~~L~~~i~~~~~l~--------~~~-------~~~i~~qi~~a-l~~lH~~~ivH~dikp~Nil~~~~~~~~l~  139 (279)
T cd05633          76 LDLMNGGDLHYHLSQHGVFS--------EKE-------MRFYATEIILG-LEHMHNRFVVYRDLKPANILLDEHGHVRIS  139 (279)
T ss_pred             EecCCCCCHHHHHHhcCCCC--------HHH-------HHHHHHHHHHH-HHHHHHCCcCCCCCCHHHEEECCCCCEEEc
Confidence            79999999987765322111        111       23455555554 788999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...++.
T Consensus       140 dfg~~~~~~~  149 (279)
T cd05633         140 DLGLACDFSK  149 (279)
T ss_pred             cCCcceeccc
Confidence            9999876543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=98.31  E-value=2.6e-06  Score=85.22  Aligned_cols=71  Identities=20%  Similarity=0.203  Sum_probs=53.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+.......++        ..+       ...++..++.+ +..+|..|++|+|++|.||+++.+|.+.++
T Consensus        75 ~e~~~~g~L~~~~~~~~~l~--------~~~-------~~~~~~qi~~~-l~~lH~~~ivH~dlkp~Nili~~~~~~kL~  138 (329)
T cd05588          75 IEFVSGGDLMFHMQRQRKLP--------EEH-------ARFYSAEISLA-LNFLHERGIIYRDLKLDNVLLDAEGHIKLT  138 (329)
T ss_pred             EeCCCCCCHHHHHHHcCCCC--------HHH-------HHHHHHHHHHH-HHHHHHCCeEecCCCHHHeEECCCCCEEEC
Confidence            89999999877654322221        111       22445555554 788999999999999999999999999999


Q ss_pred             ecccccc
Q 013370           81 DFGLLCR   87 (444)
Q Consensus        81 DFGmv~~   87 (444)
                      |||+...
T Consensus       139 Dfg~~~~  145 (329)
T cd05588         139 DYGMCKE  145 (329)
T ss_pred             cCccccc
Confidence            9998864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.31  E-value=2.6e-06  Score=91.88  Aligned_cols=66  Identities=27%  Similarity=0.375  Sum_probs=51.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.+|.+....                       ..+++..+.+ .+.++|..|++|+|+||+||++ .++++.++
T Consensus       415 ~E~~~g~~L~~~l~~-----------------------~~~~~~~i~~-~L~~lH~~giiHrDlkp~NILl-~~~~~~li  469 (535)
T PRK09605        415 MEYIGGKDLKDVLEG-----------------------NPELVRKVGE-IVAKLHKAGIVHGDLTTSNFIV-RDDRLYLI  469 (535)
T ss_pred             EEecCCCcHHHHHHH-----------------------HHHHHHHHHH-HHHHHHhCCCccCCCChHHEEE-ECCcEEEE
Confidence            789999988776431                       1134444444 3789999999999999999999 78899999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+.+..++.
T Consensus       470 DFGla~~~~~~  480 (535)
T PRK09605        470 DFGLGKYSDLI  480 (535)
T ss_pred             eCcccccCCch
Confidence            99999887654

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.31  E-value=7e-07  Score=92.55  Aligned_cols=43  Identities=30%  Similarity=0.489  Sum_probs=39.0

Q ss_pred             HHHHHHHHcCccccCC-CCCCeEEccCCcEEEEecccccccchh
Q 013370           49 ATLVQLLETGILHADP-HPGNLRYTSSGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        49 a~L~QLl~~GfFHADP-HPGNILv~~DGrLvlLDFGmv~~L~~~   91 (444)
                      ..+..+|..|++|+|+ +|+||+++.+|++.++|||+...+.+.
T Consensus       122 ~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~  165 (365)
T PRK09188        122 RALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRR  165 (365)
T ss_pred             HHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceecccC
Confidence            4478899999999999 799999999999999999999988653

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=98.31  E-value=4.8e-06  Score=78.24  Aligned_cols=75  Identities=27%  Similarity=0.312  Sum_probs=55.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+.|..|.+........+        ..       ....++..++++ +..++..|++|+|.+|.|++++.+|++.+.
T Consensus        72 ~e~~~~~~L~~~l~~~~~l~--------~~-------~~~~~~~qi~~~-l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~  135 (250)
T cd05123          72 LEYAPGGELFSHLSKEGRFS--------EE-------RARFYAAEIVLA-LEYLHSLGIIYRDLKPENILLDADGHIKLT  135 (250)
T ss_pred             EecCCCCcHHHHHHhcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCceecCCCcceEEEcCCCcEEEe
Confidence            78999998888765332111        11       123445555554 678899999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+.......
T Consensus       136 d~~~~~~~~~~  146 (250)
T cd05123         136 DFGLAKELSSE  146 (250)
T ss_pred             ecCcceecccC
Confidence            99998877553

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.30  E-value=1.1e-06  Score=89.37  Aligned_cols=74  Identities=31%  Similarity=0.485  Sum_probs=57.8

Q ss_pred             CCCcCCCCcccHHhhcCC-CCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEcc-CCcEE
Q 013370            1 MEWMVGESPTDLISLSTG-SSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTS-SGQIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G-~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~-DGrLv   78 (444)
                      |||+.|++|.++..-.+| ++        +.       .+..+.+..++ .+..||..||+|||++|.||++++ +|.+.
T Consensus        95 mEy~~~GsL~~~~~~~g~~l~--------E~-------~v~~ytr~iL~-GL~ylHs~g~vH~DiK~~NiLl~~~~~~~K  158 (313)
T KOG0198|consen   95 MEYAPGGSLSDLIKRYGGKLP--------EP-------LVRRYTRQILE-GLAYLHSKGIVHCDIKPANILLDPSNGDVK  158 (313)
T ss_pred             eeccCCCcHHHHHHHcCCCCC--------HH-------HHHHHHHHHHH-HHHHHHhCCEeccCcccceEEEeCCCCeEE
Confidence            899999999999875443 22        11       12234444444 488899999999999999999999 79999


Q ss_pred             EEecccccccch
Q 013370           79 FLDFGLLCRMER   90 (444)
Q Consensus        79 lLDFGmv~~L~~   90 (444)
                      +-|||+.+.+..
T Consensus       159 laDFG~a~~~~~  170 (313)
T KOG0198|consen  159 LADFGLAKKLES  170 (313)
T ss_pred             eccCcccccccc
Confidence            999999988874

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.30  E-value=2.1e-06  Score=93.56  Aligned_cols=156  Identities=18%  Similarity=0.168  Sum_probs=108.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+.|+.+.......         .+++.        ..++...-|-+.|+-||++|++++|++-.||+++++|.+.+.
T Consensus       448 mey~~Ggdm~~~~~~~---------~F~e~--------rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiA  510 (694)
T KOG0694|consen  448 MEYVAGGDLMHHIHTD---------VFSEP--------RARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIA  510 (694)
T ss_pred             EEecCCCcEEEEEecc---------cccHH--------HHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEec
Confidence            8999999855543321         11111        124555666777999999999999999999999999999999


Q ss_pred             ecccccccc-hhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHhchhccCCCCcccHHHHHHHH
Q 013370           81 DFGLLCRME-RKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKI  159 (444)
Q Consensus        81 DFGmv~~L~-~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~~~~~~~~l~~~~f~~ll~~l  159 (444)
                      ||||+++-- ...+.       +..++..+-++-....=+-....+|=++|.--+..++-.   ..+.+.-+=.++.+.+
T Consensus       511 DFGlcKe~m~~g~~T-------sTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~G---q~PF~gddEee~FdsI  580 (694)
T KOG0694|consen  511 DFGLCKEGMGQGDRT-------STFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVG---ESPFPGDDEEEVFDSI  580 (694)
T ss_pred             ccccccccCCCCCcc-------ccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcC---CCCCCCCCHHHHHHHH
Confidence            999999764 33322       233466666664444444556778988887777776643   1233333445566666


Q ss_pred             HHHHHhCCcCCChHHHHHHHHHHH
Q 013370          160 WSIALKYHFRMPPYYTLVLRSLAS  183 (444)
Q Consensus       160 ~~l~~~~~~~vP~~~~li~Ral~~  183 (444)
                      ...-..||.-++.+.+-+.|.+++
T Consensus       581 ~~d~~~yP~~ls~ea~~il~~ll~  604 (694)
T KOG0694|consen  581 VNDEVRYPRFLSKEAIAIMRRLLR  604 (694)
T ss_pred             hcCCCCCCCcccHHHHHHHHHHhc
Confidence            666667888899999888888755

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=98.30  E-value=1.3e-06  Score=95.49  Aligned_cols=115  Identities=27%  Similarity=0.410  Sum_probs=78.7

Q ss_pred             CCCcCCCCcccHHhhc---CCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEc--cCC
Q 013370            1 MEWMVGESPTDLISLS---TGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYT--SSG   75 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~---~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~--~DG   75 (444)
                      |||+.|++|..++...   .|+|        +.+       +..+...++ +.++.|+++|++|+|++||||+.-  .||
T Consensus        96 mEyC~gGsL~~~L~~PEN~~GLp--------E~e-------~l~lL~d~~-~al~~LrEn~IvHRDlKP~NIvl~~Gedg  159 (732)
T KOG4250|consen   96 MEYCSGGSLRKVLNSPENAYGLP--------ESE-------FLDLLSDLV-SALRHLRENGIVHRDLKPGNIVLQIGEDG  159 (732)
T ss_pred             EeecCCCcHHHHhcCcccccCCC--------HHH-------HHHHHHHHH-HHHHHHHHcCceeccCCCCcEEEeecCCC
Confidence            8999999999887653   1443        222       223444333 458899999999999999999886  457


Q ss_pred             cEE--EEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHh-cCCCCCCCChHHHHHHHHHHH
Q 013370           76 QIG--FLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTE-MDVVRPGTNTLRVTMDLEDAL  138 (444)
Q Consensus        76 rLv--lLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~-lG~l~~~~d~~~~~~~L~~~l  138 (444)
                      +.+  ++|||+.+.+++..   .+..++    +..+-++-.+.+ -++.+..+|.+.|.--+....
T Consensus       160 q~IyKLtDfG~Arel~d~s---~~~S~v----GT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~ca  218 (732)
T KOG4250|consen  160 QSIYKLTDFGAARELDDNS---LFTSLV----GTEEYLHPELYERQKKYTATVDLWSFGVTLYECA  218 (732)
T ss_pred             ceEEeeecccccccCCCCC---eeeeec----CchhhcChHHHhhccCcCceeehhhhhhHHHHHh
Confidence            654  89999999999976   233333    233334444444 477778888888766555543

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=98.29  E-value=1e-06  Score=89.57  Aligned_cols=72  Identities=21%  Similarity=0.295  Sum_probs=53.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.++..-...++        ..       ....++..++.+ +..+|..|++|+|++|+||+++.+|.+.++
T Consensus        80 ~E~~~~g~L~~~i~~~~~~~--------~~-------~~~~~~~qi~~a-l~~lH~~~ivHrDlkp~Nill~~~~~ikL~  143 (376)
T cd05598          80 MDYIPGGDMMSLLIRLGIFE--------ED-------LARFYIAELTCA-IESVHKMGFIHRDIKPDNILIDRDGHIKLT  143 (376)
T ss_pred             EeCCCCCcHHHHHHhcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCeEeCCCCHHHEEECCCCCEEEE
Confidence            89999999998875322111        11       112334444443 788999999999999999999999999999


Q ss_pred             eccccccc
Q 013370           81 DFGLLCRM   88 (444)
Q Consensus        81 DFGmv~~L   88 (444)
                      |||+...+
T Consensus       144 DFG~a~~~  151 (376)
T cd05598         144 DFGLCTGF  151 (376)
T ss_pred             eCCCCccc
Confidence            99997544

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=98.29  E-value=5.7e-06  Score=78.01  Aligned_cols=77  Identities=18%  Similarity=0.238  Sum_probs=57.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+.|.+|.+......+..      ++..       ....++..++.+ +..+|..|+.|+|.+|.||+++++|++.+.
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~------~~~~-------~~~~i~~~l~~a-l~~lH~~~i~h~dl~~~nili~~~~~~~l~  143 (256)
T cd08529          78 MEYAENGDLHKLLKMQRGRP------LPED-------QVWRFFIQILLG-LAHLHSKKILHRDIKSLNLFLDAYDNVKIG  143 (256)
T ss_pred             EEeCCCCcHHHHHHHhcCCC------CCHH-------HHHHHHHHHHHH-HHHHHHCCcccCCCCcceEEEeCCCCEEEc
Confidence            78999999998875421111      1111       123455555554 678899999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...+...
T Consensus       144 df~~~~~~~~~  154 (256)
T cd08529         144 DLGVAKLLSDN  154 (256)
T ss_pred             ccccceeccCc
Confidence            99998877653

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=98.28  E-value=3.5e-06  Score=81.87  Aligned_cols=120  Identities=14%  Similarity=0.131  Sum_probs=71.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+.........    ..++..+       ...++..++.+ +..+|..|++|+|++|.||+++.+|.+.++
T Consensus        72 ~e~~~~g~L~~~~~~~~~~~----~~l~~~~-------~~~~~~qi~~~-l~~lH~~~i~H~dlkp~Nili~~~~~~~l~  139 (280)
T cd05608          72 MTIMNGGDLRYHIYNVDEEN----PGFPEPR-------ACFYTAQIISG-LEHLHQRRIIYRDLKPENVLLDNDGNVRIS  139 (280)
T ss_pred             EeCCCCCCHHHHHHhccccC----CCCCHHH-------HHHHHHHHHHH-HHHHHHCCcccCCCCHHHEEECCCCCEEEe
Confidence            79999999987653211000    0011111       22445555544 788999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCH-HHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDW-QSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~-~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||+...+.......-  .    ..+.. ....+.+.. +......|++.+.--+..++.
T Consensus       140 dfg~~~~~~~~~~~~~--~----~~g~~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~  192 (280)
T cd05608         140 DLGLAVELKDGQSKTK--G----YAGTPGFMAPELLQG-EEYDFSVDYFALGVTLYEMIA  192 (280)
T ss_pred             eCccceecCCCCcccc--c----cCCCcCccCHHHhcC-CCCCccccHHHHHHHHHHHHh
Confidence            9999877654321100  0    00111 111333322 233445778877666655553

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=98.28  E-value=3.7e-06  Score=81.98  Aligned_cols=118  Identities=12%  Similarity=0.103  Sum_probs=70.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.+.+......+..      ++..+       ...++..++.+ +..+|..|++|+|++|.||+++.+|.+.+.
T Consensus        79 ~e~~~~g~L~~~~~~~~~~~------~~~~~-------~~~~~~qi~~~-l~~lH~~~iiH~dikp~Nill~~~~~~kl~  144 (285)
T cd05631          79 LTIMNGGDLKFHIYNMGNPG------FDEQR-------AIFYAAELCCG-LEDLQRERIVYRDLKPENILLDDRGHIRIS  144 (285)
T ss_pred             EEecCCCcHHHHHHhhCCCC------CCHHH-------HHHHHHHHHHH-HHHHHhCCEEeCCCCHHHEEECCCCCEEEe
Confidence            78999999877654321100      11111       12344444444 778899999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||+...++......  ..   .....| ...+.+.. +...+..|++.+.--+..++.
T Consensus       145 Dfg~~~~~~~~~~~~--~~---~g~~~y-~aPE~~~~-~~~~~~~DvwslGvil~el~~  196 (285)
T cd05631         145 DLGLAVQIPEGETVR--GR---VGTVGY-MAPEVINN-EKYTFSPDWWGLGCLIYEMIQ  196 (285)
T ss_pred             eCCCcEEcCCCCeec--CC---CCCCCc-cCHhhhcC-CCCCcccCchhHHHHHHHHHh
Confidence            999987765432110  00   000111 11333322 233455688877665655553

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.27  E-value=1.1e-06  Score=93.94  Aligned_cols=114  Identities=19%  Similarity=0.323  Sum_probs=81.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|+|+...-         .. .+.      .+..+++..+++ |.-||..|++|.|++-.||+.+.||++.+.
T Consensus       349 MEym~ggsLTDvVt~~---------~~-~E~------qIA~Icre~l~a-L~fLH~~gIiHrDIKSDnILL~~~g~vKlt  411 (550)
T KOG0578|consen  349 MEYMEGGSLTDVVTKT---------RM-TEG------QIAAICREILQG-LKFLHARGIIHRDIKSDNILLTMDGSVKLT  411 (550)
T ss_pred             EeecCCCchhhhhhcc---------cc-cHH------HHHHHHHHHHHH-HHHHHhcceeeeccccceeEeccCCcEEEe
Confidence            9999999999986531         01 111      233566655555 899999999999999999999999999999


Q ss_pred             ecccccccchhh--HHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKH--QFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~--R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||+|.+++++.  |..+.        +-+.-++.-.+..-...+.+|++.+...+-+++.
T Consensus       412 DFGFcaqi~~~~~KR~TmV--------GTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMve  464 (550)
T KOG0578|consen  412 DFGFCAQISEEQSKRSTMV--------GTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVE  464 (550)
T ss_pred             eeeeeeccccccCcccccc--------CCCCccchhhhhhcccCccccchhhhhHHHHHhc
Confidence            999999999875  44443        3333444444444445567899887655555543

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=98.27  E-value=6.6e-06  Score=77.46  Aligned_cols=73  Identities=27%  Similarity=0.318  Sum_probs=55.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.+|.++.......        ++..       ...++..++++ +..++..|++|+|++|.||+++++|.+.+.
T Consensus        72 ~e~~~~~~L~~~l~~~~~~--------~~~~-------~~~i~~qi~~~-L~~lH~~~i~H~di~~~nil~~~~~~~~l~  135 (265)
T cd05579          72 MEYLPGGDLASLLENVGSL--------DEDV-------ARIYIAEIVLA-LEYLHSNGIIHRDLKPDNILIDSNGHLKLT  135 (265)
T ss_pred             EecCCCCcHHHHHHHcCCC--------CHHH-------HHHHHHHHHHH-HHHHHHcCeecCCCCHHHeEEcCCCCEEEE
Confidence            6899999998877532211        1111       23455665555 678999999999999999999999999999


Q ss_pred             ecccccccc
Q 013370           81 DFGLLCRME   89 (444)
Q Consensus        81 DFGmv~~L~   89 (444)
                      |||+.....
T Consensus       136 dfg~~~~~~  144 (265)
T cd05579         136 DFGLSKVGL  144 (265)
T ss_pred             ecccchhcc
Confidence            999876543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=98.26  E-value=2.1e-06  Score=85.96  Aligned_cols=75  Identities=21%  Similarity=0.272  Sum_probs=55.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.++.....+.       ++...       ...++..++.+ +..+|..|++|+|++|.||+++.+|++.+.
T Consensus        80 ~ey~~~g~L~~~l~~~~~~-------l~~~~-------~~~~~~qi~~a-l~~lH~~~iiHrDlkp~Nili~~~~~~kL~  144 (332)
T cd05623          80 MDYYVGGDLLTLLSKFEDR-------LPEDM-------ARFYLAEMVIA-IDSVHQLHYVHRDIKPDNILMDMNGHIRLA  144 (332)
T ss_pred             EeccCCCcHHHHHHHhcCC-------CCHHH-------HHHHHHHHHHH-HHHHHHCCeEecCCCHHHEEECCCCCEEEe
Confidence            7999999999887532110       11111       12344444444 778999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+..
T Consensus       145 DfG~a~~~~~  154 (332)
T cd05623         145 DFGSCLKLME  154 (332)
T ss_pred             ecchheeccc
Confidence            9999876543

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=98.26  E-value=3.9e-06  Score=81.44  Aligned_cols=75  Identities=21%  Similarity=0.254  Sum_probs=55.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..+.+........+        .       .....++..++.+ +..+|..|++|+|++|.||+++.+|++.++
T Consensus        84 ~e~~~~~~L~~~l~~~~~l~--------~-------~~~~~~~~qi~~a-l~~lH~~~i~H~dl~p~nil~~~~~~~kl~  147 (290)
T cd05613          84 LDYINGGELFTHLSQRERFK--------E-------QEVQIYSGEIVLA-LEHLHKLGIIYRDIKLENILLDSNGHVVLT  147 (290)
T ss_pred             EecCCCCcHHHHHHHcCCCC--------H-------HHHHHHHHHHHHH-HHHHHhCCeeccCCCHHHeEECCCCCEEEe
Confidence            79999999988765432221        1       1122344444444 688899999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...+...
T Consensus       148 dfg~~~~~~~~  158 (290)
T cd05613         148 DFGLSKEFHED  158 (290)
T ss_pred             eCccceecccc
Confidence            99998876543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=98.26  E-value=3e-06  Score=80.75  Aligned_cols=74  Identities=24%  Similarity=0.381  Sum_probs=56.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.+........+        ..       ....++..++.+ +..+|..|++|+|++|.||+++++|.+.+.
T Consensus        85 ~e~~~~~~L~~~l~~~~~l~--------~~-------~~~~~~~~l~~~-l~~lH~~~ivH~di~p~nil~~~~~~~~l~  148 (267)
T cd06628          85 LEYVPGGSVAALLNNYGAFE--------ET-------LVRNFVRQILKG-LNYLHNRGIIHRDIKGANILVDNKGGIKIS  148 (267)
T ss_pred             EEecCCCCHHHHHHhccCcc--------HH-------HHHHHHHHHHHH-HHHHHhcCcccccCCHHHEEEcCCCCEEec
Confidence            68999999888775321111        11       123455555555 688899999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+..
T Consensus       149 dfg~~~~~~~  158 (267)
T cd06628         149 DFGISKKLEA  158 (267)
T ss_pred             ccCCCccccc
Confidence            9999887753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=98.26  E-value=1.4e-06  Score=89.27  Aligned_cols=73  Identities=27%  Similarity=0.412  Sum_probs=55.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.++.... +.+        +..       ...++..++.+ ++.+|..|++|+|++|.||+++.+|.+.++
T Consensus       122 ~Ey~~gg~L~~~~~~~-~~~--------~~~-------~~~~~~qi~~a-L~~LH~~~ivHrDLkp~NIll~~~~~ikL~  184 (371)
T cd05622         122 MEYMPGGDLVNLMSNY-DVP--------EKW-------ARFYTAEVVLA-LDAIHSMGFIHRDVKPDNMLLDKSGHLKLA  184 (371)
T ss_pred             EcCCCCCcHHHHHHhc-CCC--------HHH-------HHHHHHHHHHH-HHHHHHCCEEeCCCCHHHEEECCCCCEEEE
Confidence            7999999998876531 111        111       12344445544 788999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+..
T Consensus       185 DfG~a~~~~~  194 (371)
T cd05622         185 DFGTCMKMNK  194 (371)
T ss_pred             eCCceeEcCc
Confidence            9999887754

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=98.25  E-value=5.1e-06  Score=80.67  Aligned_cols=75  Identities=17%  Similarity=0.260  Sum_probs=55.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+.|+.|.+.......+        +.++       ...++..++.+ +..+|..|++|+|.+|.|++++.+|++.+.
T Consensus        76 ~e~~~g~~L~~~l~~~~~l--------~~~~-------~~~~~~ql~~~-l~~lH~~~i~H~di~p~nili~~~~~~kl~  139 (278)
T cd05606          76 LDLMNGGDLHYHLSQHGVF--------SEAE-------MRFYAAEIILG-LEHMHNRFVVYRDLKPANILLDEHGHVRIS  139 (278)
T ss_pred             EecCCCCcHHHHHHhcCCC--------CHHH-------HHHHHHHHHHH-HHHHHHCCEEcCCCCHHHEEECCCCCEEEc
Confidence            7999999998776432111        1111       23455555554 678899999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...+...
T Consensus       140 dfg~~~~~~~~  150 (278)
T cd05606         140 DLGLACDFSKK  150 (278)
T ss_pred             cCcCccccCcc
Confidence            99998766543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=98.25  E-value=5.7e-06  Score=76.04  Aligned_cols=75  Identities=25%  Similarity=0.362  Sum_probs=56.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.+|.++.....+.        +.+       ....++..++++ +..++..|++|+|++|.|++++.+|.+.+.
T Consensus        66 ~e~~~~~~L~~~~~~~~~~--------~~~-------~~~~~~~~l~~~-l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~  129 (244)
T smart00220       66 MEYCDGGDLFDLLKKRGRL--------SED-------EARFYARQILSA-LEYLHSNGIIHRDLKPENILLDEDGHVKLA  129 (244)
T ss_pred             EeCCCCCCHHHHHHhccCC--------CHH-------HHHHHHHHHHHH-HHHHHHcCeecCCcCHHHeEECCCCcEEEc
Confidence            6899998888876532211        111       123455555554 678899999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||....++..
T Consensus       130 d~~~~~~~~~~  140 (244)
T smart00220      130 DFGLARQLDPG  140 (244)
T ss_pred             cccceeeeccc
Confidence            99999988765

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=98.25  E-value=1.6e-06  Score=86.21  Aligned_cols=76  Identities=22%  Similarity=0.311  Sum_probs=56.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.++.....+       .+++..       ...++..++.+ +..+|..|++|+|++|.||+++.+|++.++
T Consensus        80 ~e~~~~~~L~~~l~~~~~-------~l~~~~-------~~~~~~qi~~a-L~~lH~~~i~H~Dlkp~NIll~~~~~~kL~  144 (330)
T cd05601          80 MEYQPGGDLLSLLNRYED-------QFDEDM-------AQFYLAELVLA-IHSVHQMGYVHRDIKPENVLIDRTGHIKLA  144 (330)
T ss_pred             ECCCCCCCHHHHHHHhcC-------CCCHHH-------HHHHHHHHHHH-HHHHHHCCeEcccCchHheEECCCCCEEec
Confidence            799999999988754311       011111       12344444444 788999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...+...
T Consensus       145 Dfg~a~~~~~~  155 (330)
T cd05601         145 DFGSAARLTAN  155 (330)
T ss_pred             cCCCCeECCCC
Confidence            99999877543

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=98.25  E-value=5.7e-06  Score=84.63  Aligned_cols=115  Identities=17%  Similarity=0.161  Sum_probs=76.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      +||+.|+.|--.+....-.+        +.        ..++--.-+-+.+..||+.|++|+|++|.|||++.+|.+++.
T Consensus       104 ld~~~GGeLf~hL~~eg~F~--------E~--------~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~Lt  167 (357)
T KOG0598|consen  104 LDYLNGGELFYHLQREGRFS--------ED--------RARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLT  167 (357)
T ss_pred             EeccCCccHHHHHHhcCCcc--------hh--------HHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEe
Confidence            47888887776654322111        11        112222223456899999999999999999999999999999


Q ss_pred             eccccccc-chhhH-HhHHHHHHHHHhCCHHHH-HHHHHhcCCCCCCCChHHHHHHHHHHHhc
Q 013370           81 DFGLLCRM-ERKHQ-FAMLASIVHIVNGDWQSL-VHSLTEMDVVRPGTNTLRVTMDLEDALGE  140 (444)
Q Consensus        81 DFGmv~~L-~~~~R-~~l~~ll~alv~~D~~~l-a~~l~~lG~l~~~~d~~~~~~~L~~~l~~  140 (444)
                      |||+++.- ..... ..+|        +..+-+ .|.+.+-|. ...+|-+.+..-+.+++..
T Consensus       168 DFgL~k~~~~~~~~t~tfc--------GT~eYmAPEil~~~gy-~~~vDWWsLGillYeML~G  221 (357)
T KOG0598|consen  168 DFGLCKEDLKDGDATRTFC--------GTPEYMAPEILLGKGY-DKAVDWWSLGILLYEMLTG  221 (357)
T ss_pred             ccccchhcccCCCcccccc--------CCccccChHHHhcCCC-CcccchHhHHHHHHHHhhC
Confidence            99999843 33222 2233        333334 566666554 4568889888777777754

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=98.22  E-value=3.2e-06  Score=85.18  Aligned_cols=115  Identities=15%  Similarity=0.186  Sum_probs=77.3

Q ss_pred             CCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEe
Q 013370            2 EWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLD   81 (444)
Q Consensus         2 EwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLD   81 (444)
                      ||||-.=|.+++....|.+.         +.      ++....+++.+ ..-.+.++.+|+|.+|.||+++.+|.+.++|
T Consensus        81 E~~dhTvL~eLe~~p~G~~~---------~~------vk~~l~Q~l~a-i~~cHk~n~IHRDIKPENILit~~gvvKLCD  144 (396)
T KOG0593|consen   81 EYCDHTVLHELERYPNGVPS---------EL------VKKYLYQLLKA-IHFCHKNNCIHRDIKPENILITQNGVVKLCD  144 (396)
T ss_pred             eecchHHHHHHHhccCCCCH---------HH------HHHHHHHHHHH-hhhhhhcCeecccCChhheEEecCCcEEecc
Confidence            78888888888877777652         11      11222222222 3345789999999999999999999999999


Q ss_pred             cccccccc-hhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHH
Q 013370           82 FGLLCRME-RKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDAL  138 (444)
Q Consensus        82 FGmv~~L~-~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l  138 (444)
                      ||....|+ +..  .|.+.    +.-.|.+..+.++.---..+.+|++++.=.+.+++
T Consensus       145 FGFAR~L~~pgd--~YTDY----VATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~  196 (396)
T KOG0593|consen  145 FGFARTLSAPGD--NYTDY----VATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELL  196 (396)
T ss_pred             chhhHhhcCCcc--hhhhh----hhhhhccChhhhcccCcCCCcccchhhhHHHHHHh
Confidence            99999998 432  23332    23456777888764334456688886654444433

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=98.22  E-value=1.8e-06  Score=88.02  Aligned_cols=72  Identities=19%  Similarity=0.287  Sum_probs=52.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+........+        +.       ....++..++. .+..+|..|++|+|++|.||+++.+|.+.++
T Consensus        80 ~E~~~gg~L~~~l~~~~~~~--------e~-------~~~~~~~qi~~-al~~lH~~~ivHrDlKp~NILl~~~g~~kL~  143 (382)
T cd05625          80 MDYIPGGDMMSLLIRMGIFP--------ED-------LARFYIAELTC-AVESVHKMGFIHRDIKPDNILIDRDGHIKLT  143 (382)
T ss_pred             EeCCCCCcHHHHHHhcCCCC--------HH-------HHHHHHHHHHH-HHHHHHhCCeecCCCCHHHEEECCCCCEEEe
Confidence            79999999988764321111        11       11233444443 3788999999999999999999999999999


Q ss_pred             eccccccc
Q 013370           81 DFGLLCRM   88 (444)
Q Consensus        81 DFGmv~~L   88 (444)
                      |||+...+
T Consensus       144 DFGla~~~  151 (382)
T cd05625         144 DFGLCTGF  151 (382)
T ss_pred             ECCCCccc
Confidence            99997544

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=98.21  E-value=8e-06  Score=77.47  Aligned_cols=77  Identities=19%  Similarity=0.161  Sum_probs=57.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..+.+......+.      ..+..       ....++..++.+ +..++..|++|+|.+|+||+++.+|.+.+.
T Consensus        79 ~e~~~~~~L~~~~~~~~~~------~~~~~-------~~~~~~~qi~~~-l~~lh~~~i~H~di~p~Nili~~~~~~~l~  144 (256)
T cd05039          79 TEYMAKGSLVDYLRSRGRA------VITLA-------QQLGFALDVCEG-MEYLEEKNFVHRDLAARNVLVSEDLVAKVS  144 (256)
T ss_pred             EEecCCCcHHHHHHhcCCC------CCCHH-------HHHHHHHHHHHH-HHHHHhCCccchhcccceEEEeCCCCEEEc
Confidence            7899999998876543210      01111       123556666655 678999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||....++..
T Consensus       145 d~g~~~~~~~~  155 (256)
T cd05039         145 DFGLAKEASQG  155 (256)
T ss_pred             ccccccccccc
Confidence            99998877543

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=98.20  E-value=9.5e-06  Score=77.06  Aligned_cols=75  Identities=20%  Similarity=0.303  Sum_probs=56.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.+|.+........        ++.       ....++..++++ +..++..|++|+|++|.||+++.+|.+.++
T Consensus        79 ~e~~~~~~L~~~l~~~~~l--------~~~-------~~~~~~~~i~~~-l~~lh~~~i~h~dl~~~nil~~~~~~~~l~  142 (258)
T cd05578          79 VDLLLGGDLRYHLSQKVKF--------SEE-------QVKFWICEIVLA-LEYLHSKGIIHRDIKPDNILLDEQGHVHIT  142 (258)
T ss_pred             EeCCCCCCHHHHHHhcCCc--------CHH-------HHHHHHHHHHHH-HHHHHhCCeeccCCCHHHeEEcCCCCEEEe
Confidence            6899999998876533111        111       122445555554 778999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||....+...
T Consensus       143 d~~~~~~~~~~  153 (258)
T cd05578         143 DFNIATKVTPD  153 (258)
T ss_pred             ecccccccCCC
Confidence            99998877654

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=98.20  E-value=7.7e-06  Score=79.27  Aligned_cols=75  Identities=20%  Similarity=0.231  Sum_probs=53.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.+.+........        ...       ....++..++++ +..++..|++|+|+||.||+++.+|++.++
T Consensus        84 ~e~~~~~~L~~~~~~~~~~--------~~~-------~~~~~~~ql~~~-l~~lH~~~~~H~dl~p~nil~~~~~~~~l~  147 (288)
T cd05583          84 LDYVNGGELFTHLYQREHF--------TES-------EVRVYIAEIVLA-LDHLHQLGIIYRDIKLENILLDSEGHVVLT  147 (288)
T ss_pred             EecCCCCcHHHHHhhcCCc--------CHH-------HHHHHHHHHHHH-HHHHHHCCeeccCCCHHHeEECCCCCEEEE
Confidence            7899998887765422111        111       122344444444 678899999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...+...
T Consensus       148 dfg~~~~~~~~  158 (288)
T cd05583         148 DFGLSKEFLAE  158 (288)
T ss_pred             ECccccccccc
Confidence            99998766543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.20  E-value=2.3e-06  Score=81.22  Aligned_cols=74  Identities=24%  Similarity=0.306  Sum_probs=55.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..+.+........+        ..       ....++..++.+ +..++..|++|+|+||+||+++.+|++.+.
T Consensus        83 ~e~~~~~~l~~~~~~~~~~~--------~~-------~~~~~~~~l~~~-l~~lH~~~i~H~dl~p~nilv~~~~~~~l~  146 (263)
T cd06625          83 MEYMPGGSVKDQLKAYGALT--------ET-------VTRKYTRQILEG-VEYLHSNMIVHRDIKGANILRDSAGNVKLG  146 (263)
T ss_pred             EEECCCCcHHHHHHHhCCCC--------HH-------HHHHHHHHHHHH-HHHHHhCCeecCCCCHHHEEEcCCCCEEEe
Confidence            68999999888765321111        11       123455555555 688999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+..
T Consensus       147 dfg~~~~~~~  156 (263)
T cd06625         147 DFGASKRLQT  156 (263)
T ss_pred             ecccceeccc
Confidence            9999876654

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=98.20  E-value=5.5e-06  Score=78.32  Aligned_cols=75  Identities=28%  Similarity=0.383  Sum_probs=58.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHH-cCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLE-TGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~-~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      |||++|.+|.+........        ++..       ...++..++++ +..++. .|++|+|+||.||+++++|.+.+
T Consensus        78 ~e~~~~~~L~~~l~~~~~l--------~~~~-------~~~~~~~l~~~-l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l  141 (264)
T cd06623          78 LEYMDGGSLADLLKKVGKI--------PEPV-------LAYIARQILKG-LDYLHTKRHIIHRDIKPSNLLINSKGEVKI  141 (264)
T ss_pred             EEecCCCcHHHHHHHcCCC--------CHHH-------HHHHHHHHHHH-HHHHhccCCCccCCCCHHHEEECCCCCEEE
Confidence            6899999999887643211        1221       23566666666 678999 99999999999999999999999


Q ss_pred             Eecccccccchh
Q 013370           80 LDFGLLCRMERK   91 (444)
Q Consensus        80 LDFGmv~~L~~~   91 (444)
                      +|||....+...
T Consensus       142 ~df~~~~~~~~~  153 (264)
T cd06623         142 ADFGISKVLENT  153 (264)
T ss_pred             ccCccceecccC
Confidence            999998877653

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=98.19  E-value=2.1e-06  Score=87.76  Aligned_cols=72  Identities=19%  Similarity=0.289  Sum_probs=53.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.++.......+        +..       ...++..++. .+..+|..|++|+|++|.||+++.+|++.+.
T Consensus        80 ~E~~~gg~L~~~l~~~~~~~--------e~~-------~~~~~~qi~~-aL~~LH~~givHrDlKp~Nili~~~~~~kL~  143 (381)
T cd05626          80 MDYIPGGDMMSLLIRMEVFP--------EVL-------ARFYIAELTL-AIESVHKMGFIHRDIKPDNILIDLDGHIKLT  143 (381)
T ss_pred             EecCCCCcHHHHHHhcCCCC--------HHH-------HHHHHHHHHH-HHHHHHhCCeeecCCcHHHEEECCCCCEEEe
Confidence            89999999988765322111        111       1233444443 4788999999999999999999999999999


Q ss_pred             eccccccc
Q 013370           81 DFGLLCRM   88 (444)
Q Consensus        81 DFGmv~~L   88 (444)
                      |||+...+
T Consensus       144 DFGl~~~~  151 (381)
T cd05626         144 DFGLCTGF  151 (381)
T ss_pred             eCcCCccc
Confidence            99997654

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=98.19  E-value=4.1e-06  Score=79.86  Aligned_cols=73  Identities=19%  Similarity=0.325  Sum_probs=54.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.+........+        +.       ....++..++.+ +..++..|++|+|++|.|++++++|.+.++
T Consensus        81 ~e~~~~~~L~~~l~~~~~~~--------~~-------~~~~~~~qi~~~-l~~lH~~~i~H~dl~p~nil~~~~~~~~l~  144 (265)
T cd06631          81 MEFVPGGSISSILNRFGPLP--------EP-------VFCKYTKQILDG-VAYLHNNCVVHRDIKGNNVMLMPNGIIKLI  144 (265)
T ss_pred             EecCCCCcHHHHHHhcCCCC--------HH-------HHHHHHHHHHHH-HHHHHhCCcccCCcCHHhEEECCCCeEEec
Confidence            79999999998875321111        11       122344444444 678899999999999999999999999999


Q ss_pred             ecccccccc
Q 013370           81 DFGLLCRME   89 (444)
Q Consensus        81 DFGmv~~L~   89 (444)
                      |||....+.
T Consensus       145 dfg~~~~~~  153 (265)
T cd06631         145 DFGCARRLA  153 (265)
T ss_pred             cchhhHhhh
Confidence            999987653

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=98.19  E-value=6.4e-06  Score=78.10  Aligned_cols=77  Identities=22%  Similarity=0.306  Sum_probs=56.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.+.+......+..      ++..       ....++..++.+ +..++..|++|+|++|.||+++++|++.+.
T Consensus        77 ~e~~~~~~l~~~~~~~~~~~------~~~~-------~~~~~~~~i~~a-l~~lH~~~i~H~dl~p~nili~~~~~~~l~  142 (255)
T cd08219          77 MEYCDGGDLMQKIKLQRGKL------FPED-------TILQWFVQMCLG-VQHIHEKRVLHRDIKSKNIFLTQNGKVKLG  142 (255)
T ss_pred             EeeCCCCcHHHHHHhccCCC------CCHH-------HHHHHHHHHHHH-HHHHhhCCcccCCCCcceEEECCCCcEEEc
Confidence            78999999888765322211      1111       123445555554 788999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||....+...
T Consensus       143 dfg~~~~~~~~  153 (255)
T cd08219         143 DFGSARLLTSP  153 (255)
T ss_pred             ccCcceeeccc
Confidence            99998777543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=98.19  E-value=7.7e-06  Score=83.58  Aligned_cols=164  Identities=14%  Similarity=0.144  Sum_probs=98.8

Q ss_pred             HHHHHHHHHHHHH-------HHcCccccCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHH
Q 013370           42 LVNKGVEATLVQL-------LETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHS  114 (444)
Q Consensus        42 La~~gv~a~L~QL-------l~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~  114 (444)
                      |.+.-++.|+.|+       |..|++|+|++|+|++++.|-.+.++|||+...+++..+..+   +...+.-.|.+..+.
T Consensus       122 L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~---mTeYVaTRWYRAPEl  198 (359)
T KOG0660|consen  122 LTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFEDGF---MTEYVATRWYRAPEL  198 (359)
T ss_pred             ccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccccCcccc---hhcceeeeeecCHHH
Confidence            3344455555665       557999999999999999999999999999999976533322   222334567788999


Q ss_pred             HHhcCCCCCCCChHHHHHHHHHHHhchhccCCCCcccHHHHHHHHHHHHHhCCcCCChHHHHHHHHHHHHHHHhhhcC--
Q 013370          115 LTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLASLEGLAIAGD--  192 (444)
Q Consensus       115 l~~lG~l~~~~d~~~~~~~L~~~l~~~~~~~~l~~~~f~~ll~~l~~l~~~~~~~vP~~~~li~Ral~~LEGla~~LD--  192 (444)
                      +..+.-.+...|++.+.=-+++++.    +.++  |..++-+.++.-++.--+.. +++...-+++--.-. ....+.  
T Consensus       199 ll~~~~Yt~aiDiWSvGCI~AEmL~----gkpl--FpG~d~v~Ql~lI~~~lGtP-~~e~l~~i~s~~ar~-yi~slp~~  270 (359)
T KOG0660|consen  199 LLNSSEYTKAIDIWSVGCILAEMLT----GKPL--FPGKDYVHQLQLILELLGTP-SEEDLQKIRSEKARP-YIKSLPQI  270 (359)
T ss_pred             HhccccccchhhhhhhhHHHHHHHc----CCCC--CCCCchHHHHHHHHHhcCCC-CHHHHHHhccHHHHH-HHHhCCCC
Confidence            9888888888999976544444443    2332  23334445554444433333 455544444322222 222221  


Q ss_pred             CCCChHHhHHHHHHHHhhccCChHHHHHHHHHH
Q 013370          193 PHFKTFEAAYPFVIQKLLTENSVATRKILHSVV  225 (444)
Q Consensus       193 P~fdi~~~a~Pyv~r~Ll~~~s~~~r~~L~~~l  225 (444)
                      |...+         ..++..-+|...+.|..+|
T Consensus       271 p~~~f---------~~~fp~a~p~AidLlekmL  294 (359)
T KOG0660|consen  271 PKQPF---------SSIFPNANPLAIDLLEKML  294 (359)
T ss_pred             CCCCH---------HHHcCCCCHHHHHHHHHHh
Confidence            22221         2344456777777776665

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=98.19  E-value=2.4e-06  Score=85.61  Aligned_cols=76  Identities=22%  Similarity=0.305  Sum_probs=56.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.++.....+.       +++..       ...++..++.+ ++.+|..|++|+|++|.||+++.+|.+.++
T Consensus        80 ~Ey~~gg~L~~~l~~~~~~-------l~~~~-------~~~~~~qi~~~-L~~lH~~~iiHrDlkp~Nill~~~~~~kl~  144 (331)
T cd05624          80 MDYYVGGDLLTLLSKFEDR-------LPEDM-------ARFYIAEMVLA-IHSIHQLHYVHRDIKPDNVLLDMNGHIRLA  144 (331)
T ss_pred             EeCCCCCcHHHHHHHhcCC-------CCHHH-------HHHHHHHHHHH-HHHHHHCCeeeccCchHHEEEcCCCCEEEE
Confidence            8999999999887642110       11111       12344444444 788999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...+...
T Consensus       145 DfG~a~~~~~~  155 (331)
T cd05624         145 DFGSCLKMNQD  155 (331)
T ss_pred             eccceeeccCC
Confidence            99998776543

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=98.18  E-value=8.4e-06  Score=78.65  Aligned_cols=132  Identities=10%  Similarity=0.181  Sum_probs=73.7

Q ss_pred             CCCcCCCCcccHHhhcCC-CCCCCCCchhh-HhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEE
Q 013370            1 MEWMVGESPTDLISLSTG-SSVDGSSTHLD-RQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G-~~~~~i~~~~~-~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLv   78 (444)
                      |||+.|..+.++...... ........... ....+. .....++..++.+ +..+|..|++|+|++|.|+++.+++++.
T Consensus        87 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ql~~a-L~~lH~~gi~H~dlkp~Nil~~~~~~~k  164 (283)
T cd05091          87 FSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEP-ADFVHIVTQIAAG-MEFLSSHHVVHKDLATRNVLVFDKLNVK  164 (283)
T ss_pred             EEcCCCCcHHHHHHhcCCCccccccccccccccccCH-HHHHHHHHHHHHH-HHHHHHcCccccccchhheEecCCCceE
Confidence            578888888888754311 00000000000 011111 1233556666665 7889999999999999999999999999


Q ss_pred             EEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHH
Q 013370           79 FLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDAL  138 (444)
Q Consensus        79 lLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l  138 (444)
                      +.|||+...+.............  ..-.| ...+.+ .-+...+..|++.+.--+.+++
T Consensus       165 l~Dfg~~~~~~~~~~~~~~~~~~--~~~~y-~aPE~~-~~~~~~~~~Dv~slG~~l~el~  220 (283)
T cd05091         165 ISDLGLFREVYAADYYKLMGNSL--LPIRW-MSPEAI-MYGKFSIDSDIWSYGVVLWEVF  220 (283)
T ss_pred             ecccccccccccchheeeccCcc--CCccc-cCHHHH-hcCCCCcchhHHHHHHHHHHHH
Confidence            99999988765432211100000  00001 112222 2244455677877766666655

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=98.18  E-value=2.4e-06  Score=85.60  Aligned_cols=72  Identities=21%  Similarity=0.190  Sum_probs=53.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+........+        +..       ...++..++.+ +..+|..|++|+|++|.||+++.+|.+.++
T Consensus        75 ~E~~~~~~L~~~~~~~~~l~--------~~~-------~~~i~~qi~~~-l~~lH~~~ivH~Dikp~Nili~~~~~~kL~  138 (329)
T cd05618          75 IEYVNGGDLMFHMQRQRKLP--------EEH-------ARFYSAEISLA-LNYLHERGIIYRDLKLDNVLLDSEGHIKLT  138 (329)
T ss_pred             EeCCCCCCHHHHHHHcCCCC--------HHH-------HHHHHHHHHHH-HHHHHHCCeeeCCCCHHHEEECCCCCEEEe
Confidence            79999999877654322221        111       22445555554 788999999999999999999999999999


Q ss_pred             eccccccc
Q 013370           81 DFGLLCRM   88 (444)
Q Consensus        81 DFGmv~~L   88 (444)
                      |||+....
T Consensus       139 DfG~~~~~  146 (329)
T cd05618         139 DYGMCKEG  146 (329)
T ss_pred             eCCccccc
Confidence            99998653

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=98.18  E-value=1.5e-05  Score=75.69  Aligned_cols=76  Identities=30%  Similarity=0.425  Sum_probs=56.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHH-cCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLE-TGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~-~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      |||++|.+|.++.....+       .++..       ....++..++.+ +..++. .|++|+|++|+||+++.+|.+.+
T Consensus        78 ~e~~~~~~L~~~~~~~~~-------~~~~~-------~~~~~~~~l~~~-l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l  142 (265)
T cd06605          78 MEYMDGGSLDKILKEVQG-------RIPER-------ILGKIAVAVLKG-LTYLHEKHKIIHRDVKPSNILVNSRGQIKL  142 (265)
T ss_pred             EEecCCCcHHHHHHHccC-------CCCHH-------HHHHHHHHHHHH-HHHHcCCCCeecCCCCHHHEEECCCCCEEE
Confidence            689999999888754311       01111       123455666655 678899 99999999999999999999999


Q ss_pred             Eecccccccchh
Q 013370           80 LDFGLLCRMERK   91 (444)
Q Consensus        80 LDFGmv~~L~~~   91 (444)
                      +|||....+...
T Consensus       143 ~d~g~~~~~~~~  154 (265)
T cd06605         143 CDFGVSGQLVNS  154 (265)
T ss_pred             eecccchhhHHH
Confidence            999998777544

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=98.17  E-value=7.2e-06  Score=78.99  Aligned_cols=87  Identities=17%  Similarity=0.195  Sum_probs=56.6

Q ss_pred             CCCcCCCCcccHHhhcCCCC-CCCCCc-hhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEE
Q 013370            1 MEWMVGESPTDLISLSTGSS-VDGSST-HLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~-~~~i~~-~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLv   78 (444)
                      |||++|+.|.+........+ +..... .......+. .....++..++.+ +..+|..|++|+|.+|.||+++++|.+.
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~l~~a-l~~lH~~~i~H~dlkp~Nil~~~~~~~~  164 (283)
T cd05048          87 FEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDC-SDFLHIAIQIAAG-MEYLSSHHFVHRDLAARNCLVGEGLTVK  164 (283)
T ss_pred             EecCCCCcHHHHHHhcCCCcccccccccccccCCCCH-HHHHHHHHHHHHH-HHHHHhCCeeccccccceEEEcCCCcEE
Confidence            78999999988775431100 000000 000001111 1123556666665 6889999999999999999999999999


Q ss_pred             EEecccccccc
Q 013370           79 FLDFGLLCRME   89 (444)
Q Consensus        79 lLDFGmv~~L~   89 (444)
                      +.|||+...+.
T Consensus       165 L~dfg~~~~~~  175 (283)
T cd05048         165 ISDFGLSRDIY  175 (283)
T ss_pred             ECCCcceeecc
Confidence            99999987654

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=98.17  E-value=2.6e-06  Score=84.93  Aligned_cols=72  Identities=25%  Similarity=0.262  Sum_probs=54.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+........+        ..       ....++..++.+ +..+|..|++|+|++|.||+++.+|++.++
T Consensus        75 ~e~~~~g~L~~~l~~~~~~~--------~~-------~~~~~~~qil~a-l~~LH~~~ivHrDlkp~Nili~~~~~~kl~  138 (330)
T cd05586          75 TDYMSGGELFWHLQKEGRFS--------ED-------RAKFYIAELVLA-LEHLHKYDIVYRDLKPENILLDATGHIALC  138 (330)
T ss_pred             EcCCCCChHHHHHHhcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCeEeccCCHHHeEECCCCCEEEe
Confidence            79999999877654322111        11       123455555555 788899999999999999999999999999


Q ss_pred             eccccccc
Q 013370           81 DFGLLCRM   88 (444)
Q Consensus        81 DFGmv~~L   88 (444)
                      |||+....
T Consensus       139 Dfg~a~~~  146 (330)
T cd05586         139 DFGLSKAN  146 (330)
T ss_pred             cCCcCcCC
Confidence            99997654

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=98.17  E-value=2.8e-06  Score=86.54  Aligned_cols=73  Identities=23%  Similarity=0.329  Sum_probs=54.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+........+        +.       ....++..++.+ +..||..|++|+|++|.||+++.+|.+.++
T Consensus        80 ~E~~~gg~L~~~l~~~~~~~--------~~-------~~~~~~~ql~~a-L~~LH~~givHrDlkp~NIll~~~~~~kl~  143 (377)
T cd05629          80 MEFLPGGDLMTMLIKYDTFS--------ED-------VTRFYMAECVLA-IEAVHKLGFIHRDIKPDNILIDRGGHIKLS  143 (377)
T ss_pred             EeCCCCCcHHHHHHhcCCCC--------HH-------HHHHHHHHHHHH-HHHHHhCCeeccCCCHHHEEECCCCCEEEe
Confidence            79999999988765322111        11       112344445544 788999999999999999999999999999


Q ss_pred             ecccccccc
Q 013370           81 DFGLLCRME   89 (444)
Q Consensus        81 DFGmv~~L~   89 (444)
                      |||+...+.
T Consensus       144 DfGla~~~~  152 (377)
T cd05629         144 DFGLSTGFH  152 (377)
T ss_pred             ecccccccc
Confidence            999986553

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=98.17  E-value=1.9e-06  Score=88.30  Aligned_cols=73  Identities=26%  Similarity=0.395  Sum_probs=55.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.++..-. ..        +..+       ...++..++.+ +..+|..|++|+|++|.||+++.+|.+.++
T Consensus       122 ~Ey~~gg~L~~~l~~~-~~--------~~~~-------~~~~~~qil~a-L~~LH~~~IvHrDLKp~NILl~~~~~~kL~  184 (370)
T cd05621         122 MEYMPGGDLVNLMSNY-DV--------PEKW-------AKFYTAEVVLA-LDAIHSMGLIHRDVKPDNMLLDKHGHLKLA  184 (370)
T ss_pred             EcCCCCCcHHHHHHhc-CC--------CHHH-------HHHHHHHHHHH-HHHHHHCCeEecCCCHHHEEECCCCCEEEE
Confidence            8999999999877521 11        1111       12344455544 788999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||....+..
T Consensus       185 DFG~a~~~~~  194 (370)
T cd05621         185 DFGTCMKMDE  194 (370)
T ss_pred             ecccceeccc
Confidence            9999887754

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=98.17  E-value=9.8e-06  Score=77.36  Aligned_cols=76  Identities=20%  Similarity=0.233  Sum_probs=56.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+.|+.|.+......+..      .+..       ....++..++.+ +..+|..|++|+|++|+|++++++|.+.+.
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~------~~~~-------~~~~~~~~l~~a-l~~lH~~~i~H~dl~~~Nill~~~~~~~l~  144 (260)
T cd05069          79 TEFMGKGSLLDFLKEGDGKY------LKLP-------QLVDMAAQIADG-MAYIERMNYIHRDLRAANILVGDNLVCKIA  144 (260)
T ss_pred             EEcCCCCCHHHHHhhCCCCC------CCHH-------HHHHHHHHHHHH-HHHHHhCCEeecccCcceEEEcCCCeEEEC
Confidence            78999999988775322110      1111       123455555555 688899999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||....+..
T Consensus       145 dfg~~~~~~~  154 (260)
T cd05069         145 DFGLARLIED  154 (260)
T ss_pred             CCccceEccC
Confidence            9999877644

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=98.16  E-value=3.4e-06  Score=84.40  Aligned_cols=75  Identities=27%  Similarity=0.351  Sum_probs=54.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHH-cCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLE-TGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~-~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      |||++|+.|.++.......+        +.       ....++..++.+ +..++. +|++|+|++|.||+++.+|.+.+
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~--------~~-------~~~~~~~~i~~~-l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl  145 (331)
T cd06649          82 MEHMDGGSLDQVLKEAKRIP--------EE-------ILGKVSIAVLRG-LAYLREKHQIMHRDVKPSNILVNSRGEIKL  145 (331)
T ss_pred             eecCCCCcHHHHHHHcCCCC--------HH-------HHHHHHHHHHHH-HHHHhhcCCEEcCCCChhhEEEcCCCcEEE
Confidence            89999999998875432221        11       122444444444 667776 47999999999999999999999


Q ss_pred             Eecccccccchh
Q 013370           80 LDFGLLCRMERK   91 (444)
Q Consensus        80 LDFGmv~~L~~~   91 (444)
                      +|||+...+...
T Consensus       146 ~Dfg~~~~~~~~  157 (331)
T cd06649         146 CDFGVSGQLIDS  157 (331)
T ss_pred             ccCccccccccc
Confidence            999998877543

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=98.16  E-value=2e-06  Score=86.80  Aligned_cols=70  Identities=24%  Similarity=0.308  Sum_probs=53.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+....            .+       ..+..++..++.+ +..||..|++|+|++|.||+++.+|++.++
T Consensus       151 ~e~~~~~~L~~~~~~------------~~-------~~~~~i~~qi~~a-L~~LH~~~ivHrDlkp~NIll~~~~~~kL~  210 (353)
T PLN00034        151 LEFMDGGSLEGTHIA------------DE-------QFLADVARQILSG-IAYLHRRHIVHRDIKPSNLLINSAKNVKIA  210 (353)
T ss_pred             EecCCCCcccccccC------------CH-------HHHHHHHHHHHHH-HHHHHHCCEeecCCCHHHEEEcCCCCEEEc
Confidence            799999887653211            01       1123556666665 788999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+..
T Consensus       211 DfG~~~~~~~  220 (353)
T PLN00034        211 DFGVSRILAQ  220 (353)
T ss_pred             ccccceeccc
Confidence            9999876643

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=98.16  E-value=3e-06  Score=80.46  Aligned_cols=75  Identities=20%  Similarity=0.182  Sum_probs=56.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+.|+++.+......+..      .+..       ....++..++.+ +..+|..|++|+|.+|+|++++.+|.+.++
T Consensus        77 ~e~~~~~~L~~~l~~~~~~~------~~~~-------~~~~~~~qi~~a-l~~lH~~~~~H~dl~p~nili~~~~~~kl~  142 (254)
T cd05083          77 MELMSKGNLVNFLRTRGRAL------VSVI-------QLLQFSLDVAEG-MEYLESKKLVHRDLAARNILVSEDGVAKVS  142 (254)
T ss_pred             EECCCCCCHHHHHHhcCcCC------CCHH-------HHHHHHHHHHHH-HHHHHhCCeeccccCcceEEEcCCCcEEEC
Confidence            79999999998875432111      1111       123456666666 678899999999999999999999999999


Q ss_pred             ecccccccc
Q 013370           81 DFGLLCRME   89 (444)
Q Consensus        81 DFGmv~~L~   89 (444)
                      |||......
T Consensus       143 Dfg~~~~~~  151 (254)
T cd05083         143 DFGLARVGS  151 (254)
T ss_pred             CCccceecc
Confidence            999887544

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=98.15  E-value=1.4e-05  Score=77.82  Aligned_cols=76  Identities=18%  Similarity=0.166  Sum_probs=55.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+........      .++...       ...++..++.+ +..+|..|++|+|++|.|++++.+|.+.+.
T Consensus        79 ~e~~~~~~L~~~~~~~~~~------~~~~~~-------~~~~~~qi~~~-l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~  144 (285)
T cd05605          79 LTLMNGGDLKFHIYNMGNP------GFDEER-------AVFYAAEITCG-LEDLHRERIVYRDLKPENILLDDYGHIRIS  144 (285)
T ss_pred             EeccCCCcHHHHHHhcCcC------CCCHHH-------HHHHHHHHHHH-HHHHHHCCcEecCCCHHHEEECCCCCEEEe
Confidence            7999999998776432110      011111       22445555554 678899999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...++.
T Consensus       145 Dfg~~~~~~~  154 (285)
T cd05605         145 DLGLAVEIPE  154 (285)
T ss_pred             eCCCceecCC
Confidence            9999877653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=98.14  E-value=5.5e-06  Score=81.43  Aligned_cols=74  Identities=23%  Similarity=0.447  Sum_probs=55.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..+.++.... .        ++..+       ...++..++.+ +..++..|++|+|++|.||+++.+|.+.++
T Consensus        96 ~e~~~~~~L~~~~~~~-~--------~~~~~-------~~~~~~ql~~~-l~~lH~~givH~dl~p~Nilv~~~~~~~l~  158 (292)
T cd06657          96 MEFLEGGALTDIVTHT-R--------MNEEQ-------IAAVCLAVLKA-LSVLHAQGVIHRDIKSDSILLTHDGRVKLS  158 (292)
T ss_pred             EecCCCCcHHHHHhcC-C--------CCHHH-------HHHHHHHHHHH-HHHHHHCCeecCCCCHHHEEECCCCCEEEc
Confidence            7999999988865321 1        11111       22455555554 788999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...+...
T Consensus       159 dfg~~~~~~~~  169 (292)
T cd06657         159 DFGFCAQVSKE  169 (292)
T ss_pred             ccccceecccc
Confidence            99998777553

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=98.14  E-value=1e-05  Score=76.86  Aligned_cols=73  Identities=27%  Similarity=0.399  Sum_probs=55.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.++......++        ..       ....++..++.+ +..+|..|++|+|++|.||+++.+|.+.+.
T Consensus        76 ~e~~~~~~L~~~l~~~~~~~--------~~-------~~~~i~~qi~~a-L~~lH~~~i~H~dl~p~nil~~~~~~~~l~  139 (260)
T cd05611          76 MEYLNGGDCASLIKTLGGLP--------ED-------WAKQYIAEVVLG-VEDLHQRGIIHRDIKPENLLIDQTGHLKLT  139 (260)
T ss_pred             EeccCCCCHHHHHHHcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCeecCCCCHHHeEECCCCcEEEe
Confidence            69999999998875432222        11       123455555555 678899999999999999999999999999


Q ss_pred             ecccccccc
Q 013370           81 DFGLLCRME   89 (444)
Q Consensus        81 DFGmv~~L~   89 (444)
                      |||......
T Consensus       140 dfg~~~~~~  148 (260)
T cd05611         140 DFGLSRNGL  148 (260)
T ss_pred             ecccceecc
Confidence            999876543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=98.12  E-value=1.3e-05  Score=75.08  Aligned_cols=77  Identities=29%  Similarity=0.367  Sum_probs=57.1

Q ss_pred             CCCcCCCCcccHHhhcC--CCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEE
Q 013370            1 MEWMVGESPTDLISLST--GSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~--G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLv   78 (444)
                      |||++|.+|.+......  +.      .++..       .+..++..++.+ +..++..|++|+|++|.|++++++|.+.
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~~------~~~~~-------~~~~i~~~i~~~-l~~lh~~~~~H~dl~~~nil~~~~~~~~  143 (258)
T cd08215          78 MEYADGGDLSQKIKKQKKEGK------PFPEE-------QILDWFVQLCLA-LKYLHSRKILHRDIKPQNIFLTSNGLVK  143 (258)
T ss_pred             EEecCCCcHHHHHHHhhccCC------CcCHH-------HHHHHHHHHHHH-HHHHHhCCEecccCChHHeEEcCCCcEE
Confidence            68999999988765421  11      11111       123455555555 6789999999999999999999999999


Q ss_pred             EEecccccccchh
Q 013370           79 FLDFGLLCRMERK   91 (444)
Q Consensus        79 lLDFGmv~~L~~~   91 (444)
                      ++|||........
T Consensus       144 l~d~~~~~~~~~~  156 (258)
T cd08215         144 LGDFGISKVLSST  156 (258)
T ss_pred             ECCccceeecccC
Confidence            9999999876554

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=98.12  E-value=4.9e-06  Score=82.97  Aligned_cols=49  Identities=16%  Similarity=0.195  Sum_probs=41.3

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      .++..++++ +..+|..|++|+|++|.||+++.+|++.++|||+...+..
T Consensus       178 ~~~~qi~~a-L~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~  226 (338)
T cd05102         178 CYSFQVARG-MEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYK  226 (338)
T ss_pred             HHHHHHHHH-HHHHHHCCEECCCCccceEEEcCCCcEEEeeccccccccc
Confidence            444555554 7889999999999999999999999999999999877643

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=98.12  E-value=1.6e-05  Score=77.52  Aligned_cols=76  Identities=20%  Similarity=0.199  Sum_probs=54.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+.|+.|.+........+      ++..       ....++..++.+ +..+|..|++|+|.+|.|++++.+|.+.+.
T Consensus        79 ~e~~~g~~L~~~l~~~~~~~------l~~~-------~~~~~~~qi~~~-l~~lH~~~iiH~dikp~Nil~~~~~~~~l~  144 (285)
T cd05630          79 LTLMNGGDLKFHIYHMGEAG------FEEG-------RAVFYAAEICCG-LEDLHQERIVYRDLKPENILLDDHGHIRIS  144 (285)
T ss_pred             EEecCCCcHHHHHHHhcccC------CCHH-------HHHHHHHHHHHH-HHHHHhCCEEeCCCCHHHEEECCCCCEEEe
Confidence            79999999988764321100      1111       122445555444 677899999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||....++.
T Consensus       145 Dfg~~~~~~~  154 (285)
T cd05630         145 DLGLAVHVPE  154 (285)
T ss_pred             eccceeecCC
Confidence            9998876654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.12  E-value=6.8e-06  Score=89.58  Aligned_cols=155  Identities=15%  Similarity=0.093  Sum_probs=100.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      .||++|+.|-|..-.+++++.           -++.+-.+++..-     +...|.+++.|+|++|.|++++..++|.+-
T Consensus        91 lEyv~gGELFdylv~kG~l~e-----------~eaa~ff~QIi~g-----v~yCH~~~icHRDLKpENlLLd~~~nIKIA  154 (786)
T KOG0588|consen   91 LEYVPGGELFDYLVRKGPLPE-----------REAAHFFRQILDG-----VSYCHAFNICHRDLKPENLLLDVKNNIKIA  154 (786)
T ss_pred             EEecCCchhHHHHHhhCCCCC-----------HHHHHHHHHHHHH-----HHHHhhhcceeccCCchhhhhhcccCEeee
Confidence            489999999999887766541           1222222333322     344588999999999999999999999999


Q ss_pred             eccccc-ccchhhHHhHHHHHHHHHhCCHH-HHHHHHHhcCCCCCCCChHHHHHHHHHHHhchhccCCCCcccHHHHHHH
Q 013370           81 DFGLLC-RMERKHQFAMLASIVHIVNGDWQ-SLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGK  158 (444)
Q Consensus        81 DFGmv~-~L~~~~R~~l~~ll~alv~~D~~-~la~~l~~lG~l~~~~d~~~~~~~L~~~l~~~~~~~~l~~~~f~~ll~~  158 (444)
                      ||||.. +.+...-++.|        +-.. +..|.+..--+-....|++...--+..++...   -+..+-|+..++.+
T Consensus       155 DFGMAsLe~~gklLeTSC--------GSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~---LPFdDdNir~LLlK  223 (786)
T KOG0588|consen  155 DFGMASLEVPGKLLETSC--------GSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGK---LPFDDDNIRVLLLK  223 (786)
T ss_pred             ccceeecccCCccccccC--------CCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCC---CCCCCccHHHHHHH
Confidence            999987 44444444443        3322 23555544444455578888776666666542   24556677777766


Q ss_pred             HHHHHHhCCcCCChHHHHHHHHHH
Q 013370          159 IWSIALKYHFRMPPYYTLVLRSLA  182 (444)
Q Consensus       159 l~~l~~~~~~~vP~~~~li~Ral~  182 (444)
                      +..-.+.-|-.+|++-=-++|.+.
T Consensus       224 V~~G~f~MPs~Is~eaQdLLr~ml  247 (786)
T KOG0588|consen  224 VQRGVFEMPSNISSEAQDLLRRML  247 (786)
T ss_pred             HHcCcccCCCcCCHHHHHHHHHHh
Confidence            655445555555666656666653

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=98.12  E-value=2.2e-05  Score=74.52  Aligned_cols=76  Identities=22%  Similarity=0.253  Sum_probs=56.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.+|.+......+..      ++.+       ....++..++.+ +..++..|++|+|.+|.|++++++|.+.++
T Consensus        80 ~e~~~~~~L~~~i~~~~~~~------~~~~-------~~~~~~~~i~~a-l~~lh~~~i~h~di~p~nili~~~~~~~l~  145 (261)
T cd05034          80 TEYMSKGSLLDFLKSGEGKK------LRLP-------QLVDMAAQIAEG-MAYLESRNYIHRDLAARNILVGENLVCKIA  145 (261)
T ss_pred             EeccCCCCHHHHHhccccCC------CCHH-------HHHHHHHHHHHH-HHHHHhCCcccCCcchheEEEcCCCCEEEC
Confidence            78999999988765321111      1111       123455566555 678899999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||....+..
T Consensus       146 d~g~~~~~~~  155 (261)
T cd05034         146 DFGLARLIED  155 (261)
T ss_pred             ccccceeccc
Confidence            9999887754

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=98.11  E-value=1.5e-05  Score=75.81  Aligned_cols=75  Identities=23%  Similarity=0.269  Sum_probs=56.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.+|.+...-...        ++..+       ...++..++.+ +..++..|++|+|++|.||+++.+|.+.++
T Consensus        72 ~e~~~~~~L~~~l~~~~~--------l~~~~-------~~~~~~~i~~~-l~~lH~~~~~h~dl~~~nilv~~~~~~~l~  135 (262)
T cd05572          72 MEYCLGGELWTILRDRGL--------FDEYT-------ARFYIACVVLA-FEYLHNRGIIYRDLKPENLLLDSNGYVKLV  135 (262)
T ss_pred             EecCCCCcHHHHHhhcCC--------CCHHH-------HHHHHHHHHHH-HHHHhhCCcccCCCCHHHEEEcCCCCEEEe
Confidence            789999999887653211        11111       22344444444 688999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||....++..
T Consensus       136 df~~~~~~~~~  146 (262)
T cd05572         136 DFGFAKKLKSG  146 (262)
T ss_pred             eCCcccccCcc
Confidence            99999888764

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=98.11  E-value=8.7e-06  Score=87.14  Aligned_cols=78  Identities=15%  Similarity=0.178  Sum_probs=55.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+.........    ..+++..       ...++..++.+ +..+|..|++|+|++|.||+++.+|.+.++
T Consensus       118 ~Ey~~~gsL~~~l~~~~~~~----~~l~e~~-------~~~i~~qll~a-L~~lH~~~IiHrDLKP~NILl~~~~~vkL~  185 (496)
T PTZ00283        118 LDYANAGDLRQEIKSRAKTN----RTFREHE-------AGLLFIQVLLA-VHHVHSKHMIHRDIKSANILLCSNGLVKLG  185 (496)
T ss_pred             EeCCCCCcHHHHHHHhhccC----CCCCHHH-------HHHHHHHHHHH-HHHHHhCCEecCCCCHHHEEEeCCCCEEEE
Confidence            79999999988765321000    0111111       12344444444 788999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+..
T Consensus       186 DFGls~~~~~  195 (496)
T PTZ00283        186 DFGFSKMYAA  195 (496)
T ss_pred             ecccCeeccc
Confidence            9999876543

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=98.11  E-value=1.5e-05  Score=76.01  Aligned_cols=76  Identities=20%  Similarity=0.238  Sum_probs=56.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.+......+..      .+..       ....++..++.+ +..+|..|++|+|++|.|++++.+|++.+.
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~------~~~~-------~~~~~~~~l~~a-l~~lH~~~i~H~di~p~Nili~~~~~~~l~  144 (260)
T cd05070          79 TEYMSKGSLLDFLKDGEGRA------LKLP-------NLVDMAAQVAAG-MAYIERMNYIHRDLRSANILVGDGLVCKIA  144 (260)
T ss_pred             EEecCCCcHHHHHHhcCCCC------CCHH-------HHHHHHHHHHHH-HHHHHHCCcccCCCccceEEEeCCceEEeC
Confidence            78999999888764321100      1111       123556666655 678899999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||....+..
T Consensus       145 dfg~~~~~~~  154 (260)
T cd05070         145 DFGLARLIED  154 (260)
T ss_pred             CceeeeeccC
Confidence            9999987654

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=98.11  E-value=3.9e-06  Score=81.15  Aligned_cols=75  Identities=17%  Similarity=0.290  Sum_probs=54.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..+..+.....+.+        .+       ....++..++.+ +..+|..|++|+|++|.||+++.+|.+.+.
T Consensus        79 ~e~~~~~~l~~~~~~~~~~~--------~~-------~~~~~~~qi~~~-L~~lH~~~i~H~dlkp~Nill~~~~~~kl~  142 (287)
T cd07848          79 FEYVEKNMLELLEEMPNGVP--------PE-------KVRSYIYQLIKA-IHWCHKNDIVHRDIKPENLLISHNDVLKLC  142 (287)
T ss_pred             EecCCCCHHHHHHhcCCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCeecCCCCHHHEEEcCCCcEEEe
Confidence            79999987765543222221        11       123455555554 788899999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...++..
T Consensus       143 Dfg~~~~~~~~  153 (287)
T cd07848         143 DFGFARNLSEG  153 (287)
T ss_pred             eccCccccccc
Confidence            99999877543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.11  E-value=6.4e-06  Score=78.58  Aligned_cols=67  Identities=15%  Similarity=0.236  Sum_probs=49.1

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHH
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSL  115 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l  115 (444)
                      ++...++....+.++..|++|||+.|-||++. +|++.+||||.+...+-..-..+       ..+|...+..-|
T Consensus       128 ~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~~-~~~v~iIDF~qav~~~hp~a~~~-------l~RD~~ni~~fF  194 (197)
T cd05146         128 NAYYQVLSMMKQLYKECNLVHADLSEYNMLWH-DGKVWFIDVSQSVEPTHPHGLEF-------LFRDCRNVIQFF  194 (197)
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCCCHHHEEEE-CCcEEEEECCCceeCCCCCHHHH-------HHHHHHHHHHHh
Confidence            34455555545556889999999999999996 68999999999999876544333       236666655544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=98.10  E-value=2.1e-05  Score=74.31  Aligned_cols=76  Identities=22%  Similarity=0.232  Sum_probs=56.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..+.+......+.+      ++..       ....++..++.+ +..+|..|++|+|.+|.||+++.+|.+.+.
T Consensus        79 ~e~~~~~~l~~~l~~~~~~~------l~~~-------~~~~~~~~l~~~-l~~lH~~~i~H~di~p~nil~~~~~~~~l~  144 (257)
T cd08223          79 MGFCEGGDLYHKLKEQKGKL------LPEN-------QVVEWFVQIAMA-LQYLHEKHILHRDLKTQNVFLTRTNIIKVG  144 (257)
T ss_pred             ecccCCCcHHHHHHHhcCCC------CCHH-------HHHHHHHHHHHH-HHHHHhCCeeccCCCchhEEEecCCcEEEe
Confidence            78999998887765322111      1111       123455555555 688999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+..
T Consensus       145 df~~~~~~~~  154 (257)
T cd08223         145 DLGIARVLEN  154 (257)
T ss_pred             cccceEEecc
Confidence            9999877643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=98.10  E-value=5.6e-06  Score=78.35  Aligned_cols=75  Identities=19%  Similarity=0.220  Sum_probs=55.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..+.+......+ .      .+..       ....++..++++ +..+|..|++|+|++|+||+++++|++.+.
T Consensus        72 ~e~~~~~~L~~~~~~~~~-~------~~~~-------~~~~~~~qi~~~-L~~lH~~~i~H~dl~p~nil~~~~~~~kl~  136 (252)
T cd05084          72 MELVQGGDFLTFLRTEGP-R------LKVK-------ELIQMVENAAAG-MEYLESKHCIHRDLAARNCLVTEKNVLKIS  136 (252)
T ss_pred             EeeccCCcHHHHHHhCCC-C------CCHH-------HHHHHHHHHHHH-HHHHHhCCccccccchheEEEcCCCcEEEC
Confidence            799999999887653211 0      1111       123455555555 677899999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+.+
T Consensus       137 dfg~~~~~~~  146 (252)
T cd05084         137 DFGMSREEED  146 (252)
T ss_pred             ccccCccccc
Confidence            9999876553

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=98.10  E-value=8.2e-06  Score=76.84  Aligned_cols=79  Identities=20%  Similarity=0.284  Sum_probs=56.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHH-----HcCccccCCCCCCeEEccCC
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLL-----ETGILHADPHPGNLRYTSSG   75 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl-----~~GfFHADPHPGNILv~~DG   75 (444)
                      |||++|.+|.+.........    ..++.+       ....++..++.+ +..++     ..|++|+|+||.||+++.+|
T Consensus        80 ~e~~~~~~L~~~l~~~~~~~----~~l~~~-------~~~~~~~~i~~~-l~~lH~~~~~~~~i~h~dl~p~nili~~~~  147 (265)
T cd08217          80 MEYCEGGDLAQLIQKCKKER----KYIEEE-------FIWRILTQLLLA-LYECHNRSDPGNTVLHRDLKPANIFLDANN  147 (265)
T ss_pred             ehhccCCCHHHHHHHHhhcc----cCCCHH-------HHHHHHHHHHHH-HHHHhcCccccCcceecCCCHHHEEEecCC
Confidence            79999999988875321000    001111       123455555555 56788     88999999999999999999


Q ss_pred             cEEEEecccccccchh
Q 013370           76 QIGFLDFGLLCRMERK   91 (444)
Q Consensus        76 rLvlLDFGmv~~L~~~   91 (444)
                      .+.++|||+...++..
T Consensus       148 ~~kl~d~g~~~~~~~~  163 (265)
T cd08217         148 NVKLGDFGLAKILGHD  163 (265)
T ss_pred             CEEEecccccccccCC
Confidence            9999999999887654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=98.10  E-value=1.1e-05  Score=75.34  Aligned_cols=76  Identities=24%  Similarity=0.330  Sum_probs=58.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..+.+.......        ++..+       ...++..++++ +..++..|++|+|++|.||+++++|++.++
T Consensus        80 ~e~~~~~~L~~~~~~~~~--------~~~~~-------~~~~~~~l~~~-l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~  143 (260)
T cd06606          80 LEYVSGGSLSSLLKKFGK--------LPEPV-------IRKYTRQILEG-LAYLHSNGIVHRDIKGANILVDSDGVVKLA  143 (260)
T ss_pred             EEecCCCcHHHHHHHcCC--------CCHHH-------HHHHHHHHHHH-HHHHHHCCccccCCCHHHEEEcCCCCEEEc
Confidence            689999999888653211        11221       23556666665 678899999999999999999999999999


Q ss_pred             ecccccccchhh
Q 013370           81 DFGLLCRMERKH   92 (444)
Q Consensus        81 DFGmv~~L~~~~   92 (444)
                      |||+........
T Consensus       144 d~~~~~~~~~~~  155 (260)
T cd06606         144 DFGCAKRLGDIE  155 (260)
T ss_pred             ccccEEeccccc
Confidence            999998887654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=98.09  E-value=2.4e-05  Score=76.26  Aligned_cols=73  Identities=23%  Similarity=0.449  Sum_probs=55.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.+..... ..        +..       ....++..++.+ +..++..|++|+|++|.||+++.+|++.+.
T Consensus        95 ~e~~~~~~L~~~~~~~-~~--------~~~-------~~~~~~~ql~~~-l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~  157 (285)
T cd06648          95 MEFLEGGALTDIVTHT-RM--------NEE-------QIATVCLAVLKA-LSFLHAQGVIHRDIKSDSILLTSDGRVKLS  157 (285)
T ss_pred             EeccCCCCHHHHHHhC-CC--------CHH-------HHHHHHHHHHHH-HHHHHhCCeecCCCChhhEEEcCCCcEEEc
Confidence            6899999988876431 11        111       123455666655 688999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...++.
T Consensus       158 d~g~~~~~~~  167 (285)
T cd06648         158 DFGFCAQVSK  167 (285)
T ss_pred             ccccchhhcc
Confidence            9998876654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.09  E-value=3.5e-06  Score=71.89  Aligned_cols=42  Identities=24%  Similarity=0.362  Sum_probs=35.9

Q ss_pred             HHHHHHH---cCccccCCCCCCeEEccCCcEEEEecccccccchh
Q 013370           50 TLVQLLE---TGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        50 ~L~QLl~---~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~   91 (444)
                      .+.+++.   .|++|+|+||+|+++++++.+.++|||.+...++.
T Consensus        98 ~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~~~  142 (155)
T cd05120          98 LLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYGPPA  142 (155)
T ss_pred             HHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCCChH
Confidence            3666776   48999999999999999999999999998876654

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=98.09  E-value=7.7e-06  Score=83.12  Aligned_cols=94  Identities=20%  Similarity=0.248  Sum_probs=63.1

Q ss_pred             HHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhc
Q 013370           39 LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEM  118 (444)
Q Consensus        39 l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~l  118 (444)
                      ++.++.+++.. +.-+|.+|++|+|+||.||+++++|.+.+.|||+.....-..+. +..-+   +..-| +..+.+..-
T Consensus       122 ik~~m~Qll~g-l~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~-yt~ev---vTlWY-RaPEvLlGs  195 (323)
T KOG0594|consen  122 IKSFMRQLLRG-LAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRT-YTPEV---VTLWY-RAPEVLLGS  195 (323)
T ss_pred             HHHHHHHHHHH-HHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHhcCCccc-ccccE---EEeec-cCHHHhcCC
Confidence            44566666555 67789999999999999999999999999999999876644332 22111   11222 445655443


Q ss_pred             CCCCCCCChHHHHHHHHHHH
Q 013370          119 DVVRPGTNTLRVTMDLEDAL  138 (444)
Q Consensus       119 G~l~~~~d~~~~~~~L~~~l  138 (444)
                      -..++..|++.+.--+.+++
T Consensus       196 ~~Ys~~vDiWs~GcIfaEm~  215 (323)
T KOG0594|consen  196 TSYSTSVDIWSLGCIFAEMF  215 (323)
T ss_pred             CcCCCCcchHhHHHHHHHHH
Confidence            34667788887654444444

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=98.09  E-value=2.1e-05  Score=76.05  Aligned_cols=77  Identities=26%  Similarity=0.338  Sum_probs=53.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHH-cCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLE-TGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~-~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      |||++|..+..+.......  .   .++..       ....++..++.+ +..++. .|++|+|++|.||+++.+|++.+
T Consensus        78 ~e~~~~~~l~~~~~~~~~~--~---~~~~~-------~~~~~~~~i~~~-l~~LH~~~~i~H~dl~p~nil~~~~~~~~l  144 (286)
T cd06622          78 MEYMDAGSLDKLYAGGVAT--E---GIPED-------VLRRITYAVVKG-LKFLKEEHNIIHRDVKPTNVLVNGNGQVKL  144 (286)
T ss_pred             EeecCCCCHHHHHHhcccc--C---CCCHH-------HHHHHHHHHHHH-HHHHHhcCCEeeCCCCHHHEEECCCCCEEE
Confidence            7999999998776431100  0   01111       123455555554 567775 59999999999999999999999


Q ss_pred             Eecccccccch
Q 013370           80 LDFGLLCRMER   90 (444)
Q Consensus        80 LDFGmv~~L~~   90 (444)
                      .|||+...+..
T Consensus       145 ~dfg~~~~~~~  155 (286)
T cd06622         145 CDFGVSGNLVA  155 (286)
T ss_pred             eecCCcccccC
Confidence            99999876643

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=98.08  E-value=3.5e-06  Score=86.13  Aligned_cols=73  Identities=27%  Similarity=0.389  Sum_probs=54.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.++..-. ..        ++..       ...++..++.+ +..||..|++|+|++|.||+++.+|.+.++
T Consensus       122 ~Ey~~gg~L~~~l~~~-~l--------~~~~-------~~~~~~qi~~a-L~~LH~~~ivHrDLkp~NILl~~~~~~kL~  184 (370)
T cd05596         122 MEYMPGGDLVNLMSNY-DI--------PEKW-------ARFYTAEVVLA-LDAIHSMGFIHRDVKPDNMLLDKSGHLKLA  184 (370)
T ss_pred             EcCCCCCcHHHHHHhc-CC--------CHHH-------HHHHHHHHHHH-HHHHHHCCeeccCCCHHHEEEcCCCCEEEE
Confidence            7999999998876421 11        1111       12334444444 788999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+..
T Consensus       185 DfG~~~~~~~  194 (370)
T cd05596         185 DFGTCMKMDA  194 (370)
T ss_pred             eccceeeccC
Confidence            9999877654

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=98.08  E-value=1.7e-05  Score=75.79  Aligned_cols=77  Identities=19%  Similarity=0.150  Sum_probs=56.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+......+.      .++..       ....++..++++ +..+|..|++|+|++|.||+++++|.+.+.
T Consensus        81 ~e~~~~~~L~~~~~~~~~~------~l~~~-------~~~~~~~ql~~~-l~~lH~~~i~H~dlkp~nil~~~~~~~kl~  146 (263)
T cd05052          81 TEFMTYGNLLDYLRECNRQ------EVNAV-------VLLYMATQISSA-MEYLEKKNFIHRDLAARNCLVGENHLVKVA  146 (263)
T ss_pred             EEeCCCCcHHHHHHhCCCC------CCCHH-------HHHHHHHHHHHH-HHHHHhCCEeecccCcceEEEcCCCcEEeC
Confidence            7999999998876532110      01111       123455555555 678899999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||....+...
T Consensus       147 df~~~~~~~~~  157 (263)
T cd05052         147 DFGLSRLMTGD  157 (263)
T ss_pred             CCccccccccc
Confidence            99998876543

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=98.08  E-value=4.3e-06  Score=80.06  Aligned_cols=77  Identities=16%  Similarity=0.156  Sum_probs=55.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.++.....+... .  ..+.       .....++..++.+ +..+|..|++|+|++|.|++++.+|++.+.
T Consensus        74 ~e~~~~g~L~~~l~~~~~~~~-~--~~~~-------~~~~~~~~qi~~~-l~~lH~~~ivH~dlkp~Nill~~~~~~kl~  142 (269)
T cd05042          74 LEFCPLGDLKNYLRSNRGMVA-Q--MAQK-------DVLQRMACEVASG-LLWLHQADFIHSDLALRNCQLTADLSVKIG  142 (269)
T ss_pred             EEeCCCCcHHHHHHhcccccc-c--cccH-------HHHHHHHHHHHHH-HHHHHhcCEecccccHhheEecCCCcEEEe
Confidence            799999999988754322110 0  0001       1123455555555 678999999999999999999999999999


Q ss_pred             eccccccc
Q 013370           81 DFGLLCRM   88 (444)
Q Consensus        81 DFGmv~~L   88 (444)
                      |||+....
T Consensus       143 dfg~~~~~  150 (269)
T cd05042         143 DYGLALEQ  150 (269)
T ss_pred             cccccccc
Confidence            99987554

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=98.07  E-value=2.4e-05  Score=76.35  Aligned_cols=86  Identities=16%  Similarity=0.119  Sum_probs=56.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.+........+  ..+...+..... ......++..++.+ +..+|..|+.|+|.+|.|++++.++.+.++
T Consensus        96 ~e~~~~~~L~~~l~~~~~~~--~~~~~~~~~~~~-~~~~~~i~~~i~~a-l~~lH~~~i~H~dlkp~Nill~~~~~~kl~  171 (295)
T cd05097          96 TEYMENGDLNQFLSQREIES--TFTHANNIPSVS-IANLLYMAVQIASG-MKYLASLNFVHRDLATRNCLVGNHYTIKIA  171 (295)
T ss_pred             EecCCCCcHHHHHHhccccc--cccccccCCccc-HHHHHHHHHHHHHH-HHHHHhcCeeccccChhhEEEcCCCcEEec
Confidence            79999999998875421000  000000000001 11233455555555 678899999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+..
T Consensus       172 dfg~~~~~~~  181 (295)
T cd05097         172 DFGMSRNLYS  181 (295)
T ss_pred             cccccccccc
Confidence            9999876543

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=98.06  E-value=5.9e-06  Score=79.37  Aligned_cols=76  Identities=20%  Similarity=0.274  Sum_probs=56.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..+..+......        ++..+       ...++..++.+ +..||..|++|+|++|.||+++.+|++.+.
T Consensus        79 ~e~~~~~~l~~~~~~~~~--------~~~~~-------~~~~~~ql~~~-l~~LH~~~i~H~dl~p~nil~~~~~~~~l~  142 (286)
T cd07847          79 FEYCDHTVLNELEKNPRG--------VPEHL-------IKKIIWQTLQA-VNFCHKHNCIHRDVKPENILITKQGQIKLC  142 (286)
T ss_pred             EeccCccHHHHHHhCCCC--------CCHHH-------HHHHHHHHHHH-HHHHHHCCceecCCChhhEEEcCCCcEEEC
Confidence            789999877766432211        11221       23455555554 778899999999999999999999999999


Q ss_pred             ecccccccchhh
Q 013370           81 DFGLLCRMERKH   92 (444)
Q Consensus        81 DFGmv~~L~~~~   92 (444)
                      |||+...++...
T Consensus       143 dfg~~~~~~~~~  154 (286)
T cd07847         143 DFGFARILTGPG  154 (286)
T ss_pred             ccccceecCCCc
Confidence            999998876543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=98.06  E-value=2.4e-05  Score=75.63  Aligned_cols=75  Identities=23%  Similarity=0.320  Sum_probs=56.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCC-cEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG-QIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DG-rLvl   79 (444)
                      |||++|.+|.+........        +.+       ....++..++.+ +..++..|++|+|++|.|++++++| ++.+
T Consensus        88 ~e~~~~~~L~~~l~~~~~l--------~~~-------~~~~~~~qi~~~-l~~lH~~~i~H~dl~p~nil~~~~~~~~~l  151 (267)
T PHA03390         88 MDYIKDGDLFDLLKKEGKL--------SEA-------EVKKIIRQLVEA-LNDLHKHNIIHNDIKLENVLYDRAKDRIYL  151 (267)
T ss_pred             EEcCCCCcHHHHHHhcCCC--------CHH-------HHHHHHHHHHHH-HHHHHhCCeeeCCCCHHHEEEeCCCCeEEE
Confidence            7999999998887532111        111       123455555555 6889999999999999999999998 9999


Q ss_pred             Eecccccccchh
Q 013370           80 LDFGLLCRMERK   91 (444)
Q Consensus        80 LDFGmv~~L~~~   91 (444)
                      .|||....++..
T Consensus       152 ~dfg~~~~~~~~  163 (267)
T PHA03390        152 CDYGLCKIIGTP  163 (267)
T ss_pred             ecCccceecCCC
Confidence            999998777643

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=98.06  E-value=7.4e-06  Score=88.73  Aligned_cols=90  Identities=21%  Similarity=0.268  Sum_probs=64.5

Q ss_pred             HHHHHHHHHHHHHHHcCccccCCCCCCeEE-ccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCC
Q 013370           42 LVNKGVEATLVQLLETGILHADPHPGNLRY-TSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDV  120 (444)
Q Consensus        42 La~~gv~a~L~QLl~~GfFHADPHPGNILv-~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~  120 (444)
                      .+..++.+ +..||+.|+||+|+|||||++ ..+|.|-++|||...+++++    +.   .-..+.+|. ..+.+...|+
T Consensus       420 w~~~lv~A-v~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~----~~---tp~~t~~y~-APEvl~~~~y  490 (612)
T KOG0603|consen  420 WAAELVSA-VDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS----CD---TPALTLQYV-APEVLAIQEY  490 (612)
T ss_pred             HHHHHHHH-HHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh----hc---ccchhhccc-ChhhhccCCC
Confidence            44455544 788999999999999999999 58899999999999999887    10   012223332 2455554443


Q ss_pred             CCCCCChHHHHHHHHHHHhch
Q 013370          121 VRPGTNTLRVTMDLEDALGEV  141 (444)
Q Consensus       121 l~~~~d~~~~~~~L~~~l~~~  141 (444)
                       ++..|.+.+..-|..++...
T Consensus       491 -t~acD~WSLGvlLy~ML~G~  510 (612)
T KOG0603|consen  491 -TEACDWWSLGVLLYEMLTGR  510 (612)
T ss_pred             -CcchhhHHHHHHHHHHHhCC
Confidence             35578999888888887653

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=98.06  E-value=6.9e-06  Score=78.27  Aligned_cols=74  Identities=19%  Similarity=0.223  Sum_probs=56.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..+.+........+        ..       ....++..++.+ +..+|..|++|+|.||.|+++++++.+.+.
T Consensus        74 ~e~~~~~~L~~~l~~~~~~~--------~~-------~~~~i~~qi~~a-l~~lH~~~i~H~dlkp~nill~~~~~~kl~  137 (257)
T cd05116          74 MELAELGPLNKFLQKNKHVT--------EK-------NITELVHQVSMG-MKYLEETNFVHRDLAARNVLLVTQHYAKIS  137 (257)
T ss_pred             EecCCCCcHHHHHHhcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCEeecccchhhEEEcCCCeEEEC
Confidence            78999999988765322111        11       123566666665 688999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+..
T Consensus       138 Dfg~~~~~~~  147 (257)
T cd05116         138 DFGLSKALGA  147 (257)
T ss_pred             CCccccccCC
Confidence            9999877654

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=98.06  E-value=1.6e-05  Score=76.99  Aligned_cols=92  Identities=22%  Similarity=0.232  Sum_probs=58.7

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcC
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMD  119 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG  119 (444)
                      ..++..++.+ +..+|..|++|+|++|.||+++.+|.+.++|||+...++........     .....| ...+.+.. +
T Consensus       113 ~~i~~qi~~a-L~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~-----~~~~~y-~aPE~~~~-~  184 (290)
T cd07862         113 KDMMFQLLRG-LDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSV-----VVTLWY-RAPEVLLQ-S  184 (290)
T ss_pred             HHHHHHHHHH-HHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEeccCCcccccc-----cccccc-cChHHHhC-C
Confidence            3555555555 78899999999999999999999999999999998766543111000     000111 11333322 2


Q ss_pred             CCCCCCChHHHHHHHHHHHh
Q 013370          120 VVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus       120 ~l~~~~d~~~~~~~L~~~l~  139 (444)
                      ......|++.+.--+..++.
T Consensus       185 ~~~~~~DiwslG~il~el~~  204 (290)
T cd07862         185 SYATPVDLWSVGCIFAEMFR  204 (290)
T ss_pred             CCCCccchHHHHHHHHHHHc
Confidence            33445688877666666553

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=98.06  E-value=2.7e-05  Score=76.91  Aligned_cols=88  Identities=15%  Similarity=0.179  Sum_probs=57.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCc--hhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSST--HLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~--~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLv   78 (444)
                      |||++|+.|.++.....+........  ......... .....++..++.+ +..+|..|++|+|++|.|++++.+|++.
T Consensus        97 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~qi~~a-L~~lH~~gi~H~dlkp~Nill~~~~~~k  174 (314)
T cd05099          97 VEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSF-KDLVSCAYQVARG-MEYLESRRCIHRDLAARNVLVTEDNVMK  174 (314)
T ss_pred             EecCCCCcHHHHHHhcCCCcccccccccCCcccccCH-HHHHHHHHHHHHH-HHHHHHCCeeeccccceeEEEcCCCcEE
Confidence            79999999998876432100000000  000011111 1123455555555 6888999999999999999999999999


Q ss_pred             EEecccccccch
Q 013370           79 FLDFGLLCRMER   90 (444)
Q Consensus        79 lLDFGmv~~L~~   90 (444)
                      +.|||....+..
T Consensus       175 L~Dfg~~~~~~~  186 (314)
T cd05099         175 IADFGLARGVHD  186 (314)
T ss_pred             Eccccccccccc
Confidence            999999987754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=98.06  E-value=6.8e-06  Score=78.45  Aligned_cols=74  Identities=24%  Similarity=0.409  Sum_probs=55.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.+........+        ..+       ...++..++.+ +..++..|++|+|++|+|++++.+|.+.+.
T Consensus        85 ~e~~~~~~L~~~~~~~~~~~--------~~~-------~~~~~~qi~~~-l~~lH~~~i~H~dl~p~nill~~~~~~~l~  148 (267)
T cd06646          85 MEYCGGGSLQDIYHVTGPLS--------ELQ-------IAYVCRETLQG-LAYLHSKGKMHRDIKGANILLTDNGDVKLA  148 (267)
T ss_pred             EeCCCCCcHHHHHHhcCCCC--------HHH-------HHHHHHHHHHH-HHHHHHCCccccCCCHHHEEECCCCCEEEC
Confidence            79999999988765322111        111       22345555554 678899999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+..
T Consensus       149 dfg~~~~~~~  158 (267)
T cd06646         149 DFGVAAKITA  158 (267)
T ss_pred             cCccceeecc
Confidence            9999987753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=98.05  E-value=2.9e-05  Score=73.13  Aligned_cols=75  Identities=17%  Similarity=0.205  Sum_probs=55.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.+|.+........        +..+       ...++..++.+ +..++..|++|+|++|.||+++++|.+.+.
T Consensus        81 ~e~~~~~~L~~~~~~~~~~--------~~~~-------~~~~~~~i~~~-l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~  144 (258)
T cd06632          81 LELVPGGSLAKLLKKYGSF--------PEPV-------IRLYTRQILLG-LEYLHDRNTVHRDIKGANILVDTNGVVKLA  144 (258)
T ss_pred             EEecCCCcHHHHHHhcCCC--------CHHH-------HHHHHHHHHHH-HHHHHHCCcccCCCCHHHEEECCCCCEEEc
Confidence            6899999998876532111        1111       12344445544 678899999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||....+...
T Consensus       145 d~~~~~~~~~~  155 (258)
T cd06632         145 DFGMAKQVVEF  155 (258)
T ss_pred             cCccceecccc
Confidence            99998876554

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=98.05  E-value=6.1e-06  Score=78.42  Aligned_cols=76  Identities=22%  Similarity=0.188  Sum_probs=55.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.+|.+......+..      .+..       ....++..++.+ +..+|..|++|+|.+|.||+++.+|++.++
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~------~~~~-------~~~~~~~~i~~~-l~~lH~~~i~H~dlkp~nil~~~~~~~kl~  144 (256)
T cd05082          79 TEYMAKGSLVDYLRSRGRSV------LGGD-------CLLKFSLDVCEA-MEYLEANNFVHRDLAARNVLVSEDNVAKVS  144 (256)
T ss_pred             EECCCCCcHHHHHHhcCCCC------CCHH-------HHHHHHHHHHHH-HHHHHhCCEeccccchheEEEcCCCcEEec
Confidence            78999999988765332110      1111       123455555544 788999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||.......
T Consensus       145 dfg~~~~~~~  154 (256)
T cd05082         145 DFGLTKEASS  154 (256)
T ss_pred             CCccceeccc
Confidence            9998776543

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=98.05  E-value=1.3e-05  Score=78.77  Aligned_cols=77  Identities=23%  Similarity=0.243  Sum_probs=55.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+.|.+|.++.....+..      ++...       ...++..++.+ +..+|..|++|+|+||.||+++.+|.+.+.
T Consensus        80 ~e~~~~~~L~~~~~~~~~~~------l~~~~-------~~~~~~qi~~~-l~~lH~~~i~H~dlkp~Nili~~~~~~~l~  145 (316)
T cd05574          80 MDYCPGGELFRLLQRQPGKC------LSEEV-------ARFYAAEVLLA-LEYLHLLGIVYRDLKPENILLHESGHIMLS  145 (316)
T ss_pred             EEecCCCCHHHHHHhCCCCc------cCHHH-------HHHHHHHHHHH-HHHHHHCCeeccCCChHHeEEcCCCCEEEe
Confidence            78999999988865321111      11221       12344444444 677899999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+....+..
T Consensus       146 dfg~~~~~~~~  156 (316)
T cd05574         146 DFDLSKQSDVE  156 (316)
T ss_pred             ecchhhccccc
Confidence            99998876543

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.05  E-value=9.7e-06  Score=76.95  Aligned_cols=42  Identities=19%  Similarity=0.349  Sum_probs=37.8

Q ss_pred             HHHHHHHHcCccccCCCCCCeEEccCC---cEEEEecccccccch
Q 013370           49 ATLVQLLETGILHADPHPGNLRYTSSG---QIGFLDFGLLCRMER   90 (444)
Q Consensus        49 a~L~QLl~~GfFHADPHPGNILv~~DG---rLvlLDFGmv~~L~~   90 (444)
                      .++.+||+.|++|+|+||+|||+.+++   ++.+|||+-+..-+.
T Consensus       129 ~~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~~  173 (206)
T PF06293_consen  129 RLIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRPS  173 (206)
T ss_pred             HHHHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCCC
Confidence            348999999999999999999999988   999999999886654

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=98.04  E-value=9.2e-06  Score=79.91  Aligned_cols=74  Identities=23%  Similarity=0.465  Sum_probs=55.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..+.+..... .        ++..       ....++..++.+ +..++..|++|+|++|+||+++.+|.+.+.
T Consensus        97 ~e~~~~~~L~~~~~~~-~--------~~~~-------~~~~~~~qi~~~-L~~LH~~~ivH~dl~p~Nill~~~~~~kL~  159 (297)
T cd06659          97 MEFLQGGALTDIVSQT-R--------LNEE-------QIATVCESVLQA-LCYLHSQGVIHRDIKSDSILLTLDGRVKLS  159 (297)
T ss_pred             EecCCCCCHHHHHhhc-C--------CCHH-------HHHHHHHHHHHH-HHHHHhCCeecCCCCHHHeEEccCCcEEEe
Confidence            6899999888765321 1        1111       123456666655 678899999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...++..
T Consensus       160 dfg~~~~~~~~  170 (297)
T cd06659         160 DFGFCAQISKD  170 (297)
T ss_pred             echhHhhcccc
Confidence            99998766543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=98.03  E-value=7.5e-06  Score=76.95  Aligned_cols=77  Identities=19%  Similarity=0.182  Sum_probs=57.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.++.+......+.      .++..       ....++..++.+ +..++..|++|+|.+|+||+++.+|.+.++
T Consensus        80 ~e~~~~~~l~~~~~~~~~~------~~~~~-------~~~~~~~ql~~~-l~~lh~~~~~h~dl~~~nil~~~~~~~~l~  145 (258)
T smart00219       80 MEYMEGGDLLDYLRKNRPK------ELSLS-------DLLSFALQIARG-MEYLESKNFIHRDLAARNCLVGENLVVKIS  145 (258)
T ss_pred             EeccCCCCHHHHHHhhhhc------cCCHH-------HHHHHHHHHHHH-HHHHhcCCeeecccccceEEEccCCeEEEc
Confidence            7899999998876532110      01111       233566666665 678899999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+.......
T Consensus       146 dfg~~~~~~~~  156 (258)
T smart00219      146 DFGLSRDLYDD  156 (258)
T ss_pred             ccCCceecccc
Confidence            99998877654

Phosphotransferases. Tyrosine-specific kinase subfamily.

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=98.03  E-value=3.8e-06  Score=79.23  Aligned_cols=72  Identities=29%  Similarity=0.486  Sum_probs=56.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.++.++.......+        .       ..+..++..++++ +..|+..|++|+|++|.||+++.+|++.++
T Consensus        77 ~~~~~~~~L~~~l~~~~~~~--------~-------~~~~~~~~qi~~~-L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~  140 (260)
T PF00069_consen   77 MEYCPGGSLQDYLQKNKPLS--------E-------EEILKIAYQILEA-LAYLHSKGIVHRDIKPENILLDENGEVKLI  140 (260)
T ss_dssp             EEEETTEBHHHHHHHHSSBB--------H-------HHHHHHHHHHHHH-HHHHHHTTEEESSBSGGGEEESTTSEEEES
T ss_pred             cccccccccccccccccccc--------c-------ccccccccccccc-cccccccccccccccccccccccccccccc
Confidence            68899988888776221111        1       1234666777666 899999999999999999999999999999


Q ss_pred             eccccccc
Q 013370           81 DFGLLCRM   88 (444)
Q Consensus        81 DFGmv~~L   88 (444)
                      |||....+
T Consensus       141 Dfg~~~~~  148 (260)
T PF00069_consen  141 DFGSSVKL  148 (260)
T ss_dssp             SGTTTEES
T ss_pred             cccccccc
Confidence            99998653

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=98.03  E-value=3.6e-05  Score=74.59  Aligned_cols=82  Identities=17%  Similarity=0.174  Sum_probs=56.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCC---CCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcE
Q 013370            1 MEWMVGESPTDLISLSTGSSVD---GSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~---~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrL   77 (444)
                      |||++|.+|.++.....+.+..   ....++..       .+..++..++.+ +..+|..|++|+|++|.|++++.+|++
T Consensus        98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~i~~a-l~~LH~~~i~H~dlkp~Nili~~~~~~  169 (296)
T cd05051          98 MEYMENGDLNQFLQKHVAETSGLACNSKSLSFS-------TLLYMATQIASG-MRYLESLNFVHRDLATRNCLVGKNYTI  169 (296)
T ss_pred             EecCCCCCHHHHHHhcccccccccccCCCCCHH-------HHHHHHHHHHHH-HHHHHHcCccccccchhceeecCCCce
Confidence            6899999998876543211100   00011111       223455555555 678899999999999999999999999


Q ss_pred             EEEecccccccch
Q 013370           78 GFLDFGLLCRMER   90 (444)
Q Consensus        78 vlLDFGmv~~L~~   90 (444)
                      .+.|||....+..
T Consensus       170 ~l~dfg~~~~~~~  182 (296)
T cd05051         170 KIADFGMSRNLYS  182 (296)
T ss_pred             EEccccceeeccc
Confidence            9999999876543

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=98.03  E-value=8.3e-06  Score=78.24  Aligned_cols=77  Identities=21%  Similarity=0.216  Sum_probs=56.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.+.+......+.      .++.++       ...++..++.+ +..+|..|++|+|.+|+||+++++|++.++
T Consensus        79 ~e~~~~~~L~~~~~~~~~~------~~~~~~-------~~~~~~~l~~a-L~~lH~~~i~H~dl~p~Nill~~~~~~~L~  144 (262)
T cd05071          79 TEYMSKGSLLDFLKGEMGK------YLRLPQ-------LVDMAAQIASG-MAYVERMNYVHRDLRAANILVGENLVCKVA  144 (262)
T ss_pred             EEcCCCCcHHHHHhhcccc------CCCHHH-------HHHHHHHHHHH-HHHHHHCCccccccCcccEEEcCCCcEEec
Confidence            7899999988877532111      011111       23455555555 677999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||....++..
T Consensus       145 dfg~~~~~~~~  155 (262)
T cd05071         145 DFGLARLIEDN  155 (262)
T ss_pred             cCCceeecccc
Confidence            99998877643

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=98.03  E-value=5.8e-06  Score=80.70  Aligned_cols=48  Identities=27%  Similarity=0.355  Sum_probs=40.8

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccc
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME   89 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~   89 (444)
                      .++..++.+ +..+|..|++|+|++|.||+++.+|++.++|||+.....
T Consensus       107 ~~~~qi~~a-L~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~  154 (288)
T cd07871         107 IFMFQLLRG-LSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKS  154 (288)
T ss_pred             HHHHHHHHH-HHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeecc
Confidence            455555555 788999999999999999999999999999999987653

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=98.03  E-value=6.8e-06  Score=79.61  Aligned_cols=75  Identities=21%  Similarity=0.203  Sum_probs=55.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.+.......       ..+..+       ...++..++.+ +..+|..|++|+|++|.||+++.+|.+.+.
T Consensus        87 ~e~~~g~~L~~~l~~~~~-------~~~~~~-------~~~i~~~i~~a-L~~lH~~gi~H~dlkp~Nil~~~~~~~~l~  151 (284)
T cd05079          87 MEFLPSGSLKEYLPRNKN-------KINLKQ-------QLKYAVQICKG-MDYLGSRQYVHRDLAARNVLVESEHQVKIG  151 (284)
T ss_pred             EEccCCCCHHHHHHhccC-------CCCHHH-------HHHHHHHHHHH-HHHHHHCCeeecccchheEEEcCCCCEEEC
Confidence            799999999887643210       011111       22455555554 688999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+..
T Consensus       152 dfg~~~~~~~  161 (284)
T cd05079         152 DFGLTKAIET  161 (284)
T ss_pred             CCcccccccc
Confidence            9999887654

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=98.03  E-value=8.7e-06  Score=77.13  Aligned_cols=76  Identities=20%  Similarity=0.177  Sum_probs=56.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|++|.+......+.      .++..       ....++..++.+ +..++..|++|+|+||.|++++++|.+.++
T Consensus        74 ~e~~~~~~L~~~l~~~~~~------~~~~~-------~~~~~~~qi~~~-L~~lH~~~i~H~di~p~nil~~~~~~~kl~  139 (257)
T cd05040          74 TELAPLGSLLDRLRKDALG------HFLIS-------TLCDYAVQIANG-MRYLESKRFIHRDLAARNILLASDDKVKIG  139 (257)
T ss_pred             EEecCCCcHHHHHHhcccc------cCcHH-------HHHHHHHHHHHH-HHHHHhCCccccccCcccEEEecCCEEEec
Confidence            7899999998876532110      01111       223455555555 688899999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+..
T Consensus       140 dfg~~~~~~~  149 (257)
T cd05040         140 DFGLMRALPQ  149 (257)
T ss_pred             cccccccccc
Confidence            9999887754

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=98.03  E-value=8.2e-06  Score=77.78  Aligned_cols=76  Identities=18%  Similarity=0.194  Sum_probs=56.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+.|..|.+......|..      ++..       ....++..++.+ +..+|..|++|+|.+|+||+++++|.+.++
T Consensus        80 ~e~~~~~~L~~~~~~~~~~~------~~~~-------~~~~~~~~i~~~-l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~  145 (261)
T cd05068          80 TELMKYGSLLEYLQGGAGRA------LKLP-------QLIDMAAQVASG-MAYLEAQNYIHRDLAARNVLVGENNICKVA  145 (261)
T ss_pred             eecccCCcHHHHHhccCCCC------CCHH-------HHHHHHHHHHHH-HHHHHhCCeeeccCCcceEEEcCCCCEEEC
Confidence            79999999988865322111      1111       123455555555 678899999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+..
T Consensus       146 dfg~~~~~~~  155 (261)
T cd05068         146 DFGLARVIKE  155 (261)
T ss_pred             CcceEEEccC
Confidence            9999887753

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=98.03  E-value=5.5e-06  Score=81.33  Aligned_cols=48  Identities=27%  Similarity=0.387  Sum_probs=40.9

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccc
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME   89 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~   89 (444)
                      .++..++.+ +..+|..|++|+|+||.||+++.+|++.+.|||+....+
T Consensus       107 ~~~~qi~~a-l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~  154 (303)
T cd07869         107 LFLFQLLRG-LSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKS  154 (303)
T ss_pred             HHHHHHHHH-HHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceecc
Confidence            455555555 788999999999999999999999999999999986543

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=98.02  E-value=1.7e-05  Score=76.12  Aligned_cols=86  Identities=16%  Similarity=0.113  Sum_probs=56.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCC-CchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGS-STHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i-~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      |||++|.+|.+......... ... ........... .....++..++.+ +..+|..|++|+|++|+|++++.+|.+.+
T Consensus        87 ~e~~~~~~L~~~i~~~~~~~-~~~~~~~~~~~~l~~-~~~~~~~~~i~~~-l~~lH~~~i~h~dlkp~nili~~~~~~kl  163 (280)
T cd05049          87 FEYMEHGDLNKFLRSHGPDA-AFLKSPDSPMGELTL-SQLLQIAVQIASG-MVYLASQHFVHRDLATRNCLVGYDLVVKI  163 (280)
T ss_pred             EecCCCCCHHHHHHhcCCch-hhhcccccccccccH-HHHHHHHHHHHHH-HHHHhhCCeeccccccceEEEcCCCeEEE
Confidence            79999999999876431100 000 00000111111 1233455555555 68889999999999999999999999999


Q ss_pred             Eecccccccc
Q 013370           80 LDFGLLCRME   89 (444)
Q Consensus        80 LDFGmv~~L~   89 (444)
                      .|||+...+.
T Consensus       164 ~d~g~~~~~~  173 (280)
T cd05049         164 GDFGMSRDVY  173 (280)
T ss_pred             CCcccceecc
Confidence            9999987553

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>PHA02988 hypothetical protein; Provisional

Probab=98.02  E-value=4.1e-05  Score=74.99  Aligned_cols=74  Identities=14%  Similarity=0.116  Sum_probs=53.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHH-cCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLE-TGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~-~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      |||++|+.|.++.......        +..+.       .+++..++.. +..+|. .|..|+|..|.|++++.+|.+.+
T Consensus       101 ~Ey~~~g~L~~~l~~~~~~--------~~~~~-------~~i~~~i~~~-l~~lH~~~~~~Hrdlkp~nill~~~~~~kl  164 (283)
T PHA02988        101 LEYCTRGYLREVLDKEKDL--------SFKTK-------LDMAIDCCKG-LYNLYKYTNKPYKNLTSVSFLVTENYKLKI  164 (283)
T ss_pred             EEeCCCCcHHHHHhhCCCC--------ChhHH-------HHHHHHHHHH-HHHHHhcCCCCCCcCChhhEEECCCCcEEE
Confidence            7999999999987533211        11111       2344444433 677887 49999999999999999999999


Q ss_pred             Eecccccccch
Q 013370           80 LDFGLLCRMER   90 (444)
Q Consensus        80 LDFGmv~~L~~   90 (444)
                      +|||+...++.
T Consensus       165 ~dfg~~~~~~~  175 (283)
T PHA02988        165 ICHGLEKILSS  175 (283)
T ss_pred             cccchHhhhcc
Confidence            99999876544

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=98.02  E-value=3.8e-05  Score=75.03  Aligned_cols=85  Identities=15%  Similarity=0.156  Sum_probs=57.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.++.......+  .. ...+....+. .....++..++.+ +..+|..|++|+|.+|.||+++.+|++.+.
T Consensus        98 ~e~~~~~~L~~~l~~~~~~~--~~-~~~~~~~~~~-~~~~~~~~~i~~a-l~~lH~~~i~H~dlkp~Nili~~~~~~~l~  172 (296)
T cd05095          98 TEYMENGDLNQFLSRHEPQE--AA-EKADVVTISY-STLIFMATQIASG-MKYLSSLNFVHRDLATRNCLVGKNYTIKIA  172 (296)
T ss_pred             EEeCCCCcHHHHHHhcCccc--cc-ccccccccCH-HHHHHHHHHHHHH-HHHHHHCCeecccCChheEEEcCCCCEEec
Confidence            78999999988875432111  00 0000001111 1233556565555 788999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+..
T Consensus       173 dfg~~~~~~~  182 (296)
T cd05095         173 DFGMSRNLYS  182 (296)
T ss_pred             cCcccccccC
Confidence            9999876643

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=98.01  E-value=2.9e-05  Score=75.66  Aligned_cols=76  Identities=20%  Similarity=0.201  Sum_probs=55.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..+.+........+      ++..       ....++..++.+ +..+|..|++|+|++|+|++++.+|.+.++
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~------~~~~-------~~~~~~~ql~~~-l~~lH~~~iiH~dikp~Nili~~~~~~kl~  144 (285)
T cd05632          79 LTIMNGGDLKFHIYNMGNPG------FEEE-------RALFYAAEILCG-LEDLHRENTVYRDLKPENILLDDYGHIRIS  144 (285)
T ss_pred             EEeccCccHHHHHHHhcCCC------CCHH-------HHHHHHHHHHHH-HHHHHhCCeeecCCCHHHEEECCCCCEEEe
Confidence            78999998887664321100      1111       123455555554 688899999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...++.
T Consensus       145 Dfg~~~~~~~  154 (285)
T cd05632         145 DLGLAVKIPE  154 (285)
T ss_pred             cCCcceecCC
Confidence            9998876653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=98.01  E-value=7.7e-06  Score=78.97  Aligned_cols=76  Identities=21%  Similarity=0.219  Sum_probs=55.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|++|.+......+       ..+..       ....++..++.+ +..+|..|++|+|++|.||+++++|++.+.
T Consensus        86 ~e~~~~~~L~~~l~~~~~-------~l~~~-------~~~~~~~~l~~a-L~~LH~~~i~H~dlkp~nili~~~~~~~l~  150 (284)
T cd05081          86 MEYLPYGSLRDYLQKHRE-------RLDHR-------KLLLYASQICKG-MEYLGSKRYVHRDLATRNILVESENRVKIG  150 (284)
T ss_pred             EEecCCCCHHHHHHhcCc-------CCCHH-------HHHHHHHHHHHH-HHHHHHCCceeccCCHhhEEECCCCeEEEC
Confidence            689999999987643211       01111       122445555544 788999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...++..
T Consensus       151 dfg~~~~~~~~  161 (284)
T cd05081         151 DFGLTKVLPQD  161 (284)
T ss_pred             CCcccccccCC
Confidence            99998877543

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=98.01  E-value=2.2e-05  Score=75.83  Aligned_cols=76  Identities=18%  Similarity=0.205  Sum_probs=55.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.+|.+......+.      .++..+       ...++..++.+ +..++..|++|+|++|.||+++++|.+.++
T Consensus        72 ~e~~~~~~L~~~l~~~~~~------~~~~~~-------~~~~~~ql~~~-l~~lH~~~i~H~di~p~Nil~~~~~~~~l~  137 (277)
T cd05577          72 MTLMNGGDLKYHIYNVGEP------GFPEAR-------AIFYAAQIICG-LEHLHQRRIVYRDLKPENVLLDDHGNVRIS  137 (277)
T ss_pred             EecCCCCcHHHHHHHcCcC------CCCHHH-------HHHHHHHHHHH-HHHHHhCCcccCCCCHHHEEECCCCCEEEc
Confidence            7999999998876543211      011221       22344455544 678899999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||....+..
T Consensus       138 dfg~~~~~~~  147 (277)
T cd05577         138 DLGLAVELKG  147 (277)
T ss_pred             cCcchhhhcc
Confidence            9998876643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=98.00  E-value=6.7e-06  Score=78.01  Aligned_cols=79  Identities=20%  Similarity=0.227  Sum_probs=56.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.+|.++..-...    ....++..+       ...++..++.+ +..++..|++|+|++|.|++++.+|++.+.
T Consensus        81 ~e~~~~~~L~~~l~~~~~----~~~~~~~~~-------~~~~~~~l~~~-l~~lh~~~i~h~dl~p~nil~~~~~~~~l~  148 (267)
T cd08224          81 LELADAGDLSRMIKHFKK----QKRLIPERT-------IWKYFVQLCSA-LEHMHSKRIMHRDIKPANVFITATGVVKLG  148 (267)
T ss_pred             EecCCCCCHHHHHHHhcc----cCCCcCHHH-------HHHHHHHHHHH-HHHHHhCCEecCCcChhhEEECCCCcEEEe
Confidence            799999999887642110    000112222       23455555555 678899999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...++..
T Consensus       149 d~~~~~~~~~~  159 (267)
T cd08224         149 DLGLGRFFSSK  159 (267)
T ss_pred             ccceeeeccCC
Confidence            99998776543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=98.00  E-value=9.3e-06  Score=76.59  Aligned_cols=74  Identities=16%  Similarity=0.220  Sum_probs=53.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.++.+......+       .+..++       ...++..++.+ +..++..|++|+|++|+|++++.+|.+.+.
T Consensus        71 ~e~~~~~~L~~~~~~~~~-------~~~~~~-------~~~~~~~i~~~-l~~lH~~~~~H~dl~p~nili~~~~~~~l~  135 (250)
T cd05085          71 MELVPGGDFLSFLRKKKD-------ELKTKQ-------LVKFALDAAAG-MAYLESKNCIHRDLAARNCLVGENNVLKIS  135 (250)
T ss_pred             EECCCCCcHHHHHHhcCC-------CCCHHH-------HHHHHHHHHHH-HHHHHhCCeeecccChheEEEcCCCeEEEC
Confidence            799999999887643211       011111       22444444444 677899999999999999999999999999


Q ss_pred             ecccccccc
Q 013370           81 DFGLLCRME   89 (444)
Q Consensus        81 DFGmv~~L~   89 (444)
                      |||+.....
T Consensus       136 d~g~~~~~~  144 (250)
T cd05085         136 DFGMSRQED  144 (250)
T ss_pred             CCccceecc
Confidence            999876544

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=98.00  E-value=0.0001  Score=71.53  Aligned_cols=75  Identities=19%  Similarity=0.154  Sum_probs=55.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+.|++|.+......+.       .+..       ....++..++.+ +..+|..|+.|+|++|.|++++.++++.+.
T Consensus        87 ~e~~~~gsL~~~l~~~~~~-------~~~~-------~~~~i~~qi~~~-l~~lH~~~iiH~dlkp~nili~~~~~~kl~  151 (279)
T cd05111          87 TQLSPLGSLLDHVRQHRDS-------LDPQ-------RLLNWCVQIAKG-MYYLEEHRMVHRNLAARNILLKSDSIVQIA  151 (279)
T ss_pred             EEeCCCCcHHHHHHhcccC-------CCHH-------HHHHHHHHHHHH-HHHHHHCCEeccccCcceEEEcCCCcEEEc
Confidence            6888888888877543210       1111       123455555544 678899999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+.+
T Consensus       152 Dfg~~~~~~~  161 (279)
T cd05111         152 DFGVADLLYP  161 (279)
T ss_pred             CCccceeccC
Confidence            9999876643

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=98.00  E-value=6.8e-06  Score=78.74  Aligned_cols=75  Identities=17%  Similarity=0.186  Sum_probs=56.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.+|.+......+       ..+..       ...+++..++.+ +..+|..|++|+|++|.||+++.++.+.+.
T Consensus        73 ~e~~~~~~L~~~l~~~~~-------~~~~~-------~~~~~~~~i~~~-l~~lH~~~i~H~dlkp~nil~~~~~~~kl~  137 (257)
T cd05115          73 MEMASGGPLNKFLSGKKD-------EITVS-------NVVELMHQVSMG-MKYLEGKNFVHRDLAARNVLLVNQHYAKIS  137 (257)
T ss_pred             EEeCCCCCHHHHHHhCCC-------CCCHH-------HHHHHHHHHHHH-HHHHHhcCeeecccchheEEEcCCCcEEec
Confidence            799999999987653211       01111       123556666655 577899999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||....+..
T Consensus       138 dfg~~~~~~~  147 (257)
T cd05115         138 DFGLSKALGA  147 (257)
T ss_pred             cCCccccccC
Confidence            9999876644

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=97.99  E-value=7.1e-06  Score=80.59  Aligned_cols=75  Identities=21%  Similarity=0.395  Sum_probs=56.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..+.+...-. ..        ++.       ....++..++.+ +..++..|++|+|++|.||+++.+|.+.++
T Consensus        95 ~e~~~~~~L~~~~~~~-~~--------~~~-------~~~~~~~~l~~~-L~~LH~~~i~H~dL~p~Nili~~~~~~~l~  157 (297)
T cd06656          95 MEYLAGGSLTDVVTET-CM--------DEG-------QIAAVCRECLQA-LDFLHSNQVIHRDIKSDNILLGMDGSVKLT  157 (297)
T ss_pred             ecccCCCCHHHHHHhC-CC--------CHH-------HHHHHHHHHHHH-HHHHHHCCcccCCCCHHHEEECCCCCEEEC
Confidence            7999999998876421 11        111       123455555554 688899999999999999999999999999


Q ss_pred             ecccccccchhh
Q 013370           81 DFGLLCRMERKH   92 (444)
Q Consensus        81 DFGmv~~L~~~~   92 (444)
                      |||....+++..
T Consensus       158 Dfg~~~~~~~~~  169 (297)
T cd06656         158 DFGFCAQITPEQ  169 (297)
T ss_pred             cCccceEccCCc
Confidence            999988776543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=97.99  E-value=2e-05  Score=75.29  Aligned_cols=77  Identities=21%  Similarity=0.316  Sum_probs=55.7

Q ss_pred             CCCcCCCCcccHHhhc--CCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHH-cCccccCCCCCCeEEccCCcE
Q 013370            1 MEWMVGESPTDLISLS--TGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLE-TGILHADPHPGNLRYTSSGQI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~--~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~-~GfFHADPHPGNILv~~DGrL   77 (444)
                      |||++|.++.+.....  .+.      .++..       .++.++..++.+ +..++. .|++|+|++|.||+++.+|++
T Consensus        88 ~e~~~~~~l~~~l~~~~~~~~------~~~~~-------~~~~~~~~l~~~-l~~lh~~~~i~H~dl~~~nil~~~~~~~  153 (269)
T cd08528          88 MDLIEGAPLGEHFNSLKEKKQ------RFTEE-------RIWNIFVQMVLA-LRYLHKEKRIVHRDLTPNNIMLGEDDKV  153 (269)
T ss_pred             EecCCCCcHHHHHHHHHhccC------CCCHH-------HHHHHHHHHHHH-HHHhccCCceeecCCCHHHEEECCCCcE
Confidence            7999999998876431  111      12222       123455555554 567774 689999999999999999999


Q ss_pred             EEEecccccccchh
Q 013370           78 GFLDFGLLCRMERK   91 (444)
Q Consensus        78 vlLDFGmv~~L~~~   91 (444)
                      .+.|||+....+..
T Consensus       154 ~l~dfg~~~~~~~~  167 (269)
T cd08528         154 TITDFGLAKQKQPE  167 (269)
T ss_pred             EEecccceeecccc
Confidence            99999999877654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=97.99  E-value=1.7e-05  Score=82.61  Aligned_cols=156  Identities=18%  Similarity=0.136  Sum_probs=105.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||..|+.|.|+.+.++.++        ++   ++    ..+-++++.+ ...-+.+|++|+|++-.||+++.++.+.+.
T Consensus       132 MEYaS~GeLYDYiSer~~Ls--------Er---Ea----RhfFRQIvSA-VhYCHknrVvHRDLKLENILLD~N~NiKIA  195 (668)
T KOG0611|consen  132 MEYASGGELYDYISERGSLS--------ER---EA----RHFFRQIVSA-VHYCHKNRVVHRDLKLENILLDQNNNIKIA  195 (668)
T ss_pred             EEecCCccHHHHHHHhcccc--------HH---HH----HHHHHHHHHH-HHHHhhccceecccchhheeecCCCCeeee
Confidence            89999999999998764333        11   11    1233333333 333488999999999999999999999999


Q ss_pred             ecccccccch-hhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHhchhccCCCCcccHHHHHHHH
Q 013370           81 DFGLLCRMER-KHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKI  159 (444)
Q Consensus        81 DFGmv~~L~~-~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~~~~~~~~l~~~~f~~ll~~l  159 (444)
                      |||+---.-+ .+-..||..=       ..+-.+..-.--+..|++|-+.+.--|..++-   ..+++...++..++.++
T Consensus       196 DFGLSNly~~~kfLqTFCGSP-------LYASPEIvNG~PY~GPEVDsWsLGvLLYtLVy---GtMPFDG~Dhk~lvrQI  265 (668)
T KOG0611|consen  196 DFGLSNLYADKKFLQTFCGSP-------LYASPEIVNGTPYKGPEVDSWSLGVLLYTLVY---GTMPFDGRDHKRLVRQI  265 (668)
T ss_pred             ccchhhhhccccHHHHhcCCc-------ccCCccccCCCCCCCCccchhhHHHHHHHHhh---cccccCCchHHHHHHHh
Confidence            9999765433 2223333211       11123444444566788998988766666543   24567778899899888


Q ss_pred             HHHHHhCCcCCChHHHHHHHHHHH
Q 013370          160 WSIALKYHFRMPPYYTLVLRSLAS  183 (444)
Q Consensus       160 ~~l~~~~~~~vP~~~~li~Ral~~  183 (444)
                      ..-.+.-| .-|.+-..++|-++.
T Consensus       266 s~GaYrEP-~~PSdA~gLIRwmLm  288 (668)
T KOG0611|consen  266 SRGAYREP-ETPSDASGLIRWMLM  288 (668)
T ss_pred             hcccccCC-CCCchHHHHHHHHHh
Confidence            77666555 568888889998854

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=97.99  E-value=9.7e-06  Score=77.40  Aligned_cols=74  Identities=23%  Similarity=0.393  Sum_probs=55.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.++.......+        ..       ....++..++.+ +..++..|++|+|++|.||+++.+|++.++
T Consensus        85 ~e~~~~~~L~~~~~~~~~~~--------~~-------~~~~~~~~i~~~-l~~lH~~~i~H~dlkp~nili~~~~~~~l~  148 (267)
T cd06645          85 MEFCGGGSLQDIYHVTGPLS--------ES-------QIAYVSRETLQG-LYYLHSKGKMHRDIKGANILLTDNGHVKLA  148 (267)
T ss_pred             EeccCCCcHHHHHHhcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCeecCCCCHHHEEECCCCCEEEC
Confidence            79999999999765432111        11       123445555554 678899999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||....+..
T Consensus       149 dfg~~~~~~~  158 (267)
T cd06645         149 DFGVSAQITA  158 (267)
T ss_pred             cceeeeEccC
Confidence            9999876643

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=97.99  E-value=9.5e-06  Score=77.77  Aligned_cols=75  Identities=23%  Similarity=0.251  Sum_probs=56.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+......+.       ++..+       ...++..++.+ +..+|..|++|+|.+|.|++++.+|++.++
T Consensus        84 ~e~~~~~~L~~~~~~~~~~-------~~~~~-------~~~i~~~i~~~-l~~lH~~~i~h~dlkp~nili~~~~~~~l~  148 (267)
T cd05066          84 TEYMENGSLDAFLRKHDGQ-------FTVIQ-------LVGMLRGIASG-MKYLSDMGYVHRDLAARNILVNSNLVCKVS  148 (267)
T ss_pred             EEcCCCCCHHHHHHhcCCC-------CCHHH-------HHHHHHHHHHH-HHHHHHCCEeehhhchhcEEECCCCeEEeC
Confidence            7999999998887543211       11111       23445555554 678899999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+..
T Consensus       149 dfg~~~~~~~  158 (267)
T cd05066         149 DFGLSRVLED  158 (267)
T ss_pred             CCCccccccc
Confidence            9999887654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>PHA03207 serine/threonine kinase US3; Provisional

Probab=97.98  E-value=2.3e-05  Score=80.67  Aligned_cols=95  Identities=18%  Similarity=0.190  Sum_probs=59.2

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcC
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMD  119 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG  119 (444)
                      ..++..++.+ +..+|..|++|+|++|.||+++.+|.+.++|||+...+.......-...+.+  ...| ...+.+. .+
T Consensus       188 ~~i~~ql~~a-L~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~g--t~~y-~aPE~~~-~~  262 (392)
T PHA03207        188 ITIQRRLLEA-LAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSG--TLET-NSPELLA-LD  262 (392)
T ss_pred             HHHHHHHHHH-HHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCccccccccccccc--ccCc-cCHhHhc-CC
Confidence            3455556555 7889999999999999999999999999999999877654321100000000  0111 1123332 22


Q ss_pred             CCCCCCChHHHHHHHHHHHh
Q 013370          120 VVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus       120 ~l~~~~d~~~~~~~L~~~l~  139 (444)
                      ......|++.+.--+..++.
T Consensus       263 ~~~~~~DvwslGvil~el~~  282 (392)
T PHA03207        263 PYCAKTDIWSAGLVLFEMSV  282 (392)
T ss_pred             CCCchhhHHHHHHHHHHHHH
Confidence            33455788877766666553

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=97.98  E-value=9.9e-06  Score=78.61  Aligned_cols=76  Identities=18%  Similarity=0.208  Sum_probs=55.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+........+      ....       ....++..++.+ +..+|..|++|+|++|.||+++.+|.+.++
T Consensus        72 ~e~~~g~~L~~~~~~~~~~~------~~~~-------~~~~~~~qi~~a-l~~lH~~~ivH~dikp~Nili~~~~~~~l~  137 (277)
T cd05607          72 MSLMNGGDLKYHIYNVGERG------LEME-------RVIHYSAQITCG-ILHLHSMDIVYRDMKPENVLLDDQGNCRLS  137 (277)
T ss_pred             EecCCCCCHHHHHHhccccC------CCHH-------HHHHHHHHHHHH-HHHHHHCCEEEccCChHhEEEcCCCCEEEe
Confidence            79999999987664321111      0111       122344455544 688999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+..
T Consensus       138 Dfg~~~~~~~  147 (277)
T cd05607         138 DLGLAVELKD  147 (277)
T ss_pred             eceeeeecCC
Confidence            9999877654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=97.98  E-value=2.6e-05  Score=76.70  Aligned_cols=74  Identities=22%  Similarity=0.416  Sum_probs=55.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..+.+...-. ..+        ..       ....++..++.+ +..++..|++|+|++|.||+++.+|++.+.
T Consensus        95 ~e~~~~~~L~~~~~~~-~l~--------~~-------~~~~i~~~l~~a-l~~LH~~~i~H~dL~p~Nili~~~~~~kl~  157 (296)
T cd06655          95 MEYLAGGSLTDVVTET-CMD--------EA-------QIAAVCRECLQA-LEFLHANQVIHRDIKSDNVLLGMDGSVKLT  157 (296)
T ss_pred             EEecCCCcHHHHHHhc-CCC--------HH-------HHHHHHHHHHHH-HHHHHHCCcccCCCCHHHEEECCCCCEEEc
Confidence            6899999988876421 111        11       123445555544 678899999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...+.+.
T Consensus       158 dfg~~~~~~~~  168 (296)
T cd06655         158 DFGFCAQITPE  168 (296)
T ss_pred             cCccchhcccc
Confidence            99998877654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=97.98  E-value=9.2e-06  Score=77.61  Aligned_cols=76  Identities=24%  Similarity=0.401  Sum_probs=55.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+.|..+.++.....+..      ..+..       ...++..++.+ +..+|..|++|+|+||.||+++++|.+.+.
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~------l~~~~-------~~~~~~qi~~~-l~~LH~~~ivh~dl~~~nili~~~~~~~l~  153 (272)
T cd06637          88 MEFCGAGSVTDLIKNTKGNT------LKEEW-------IAYICREILRG-LSHLHQHKVIHRDIKGQNVLLTENAEVKLV  153 (272)
T ss_pred             EEcCCCCcHHHHHHhccCCC------CCHHH-------HHHHHHHHHHH-HHHHHHCCCccCCCCHHHEEECCCCCEEEc
Confidence            78999999988765421110      11111       22445555544 688999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...++.
T Consensus       154 Dfg~~~~~~~  163 (272)
T cd06637         154 DFGVSAQLDR  163 (272)
T ss_pred             cCCCceeccc
Confidence            9999877654

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=97.98  E-value=1.3e-05  Score=76.73  Aligned_cols=74  Identities=23%  Similarity=0.309  Sum_probs=55.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.+|.+.......        ++..+       ...++..++.+ +..++..|++|+|++|+||+++++|.+.+.
T Consensus        87 ~e~~~~~~L~~~l~~~~~--------l~~~~-------~~~~~~qi~~~-l~~lH~~~i~H~dl~~~nil~~~~~~~~l~  150 (272)
T cd06629          87 LEYVPGGSIGSCLRTYGR--------FEEQL-------VRFFTEQVLEG-LAYLHSKGILHRDLKADNLLVDADGICKIS  150 (272)
T ss_pred             EecCCCCcHHHHHhhccC--------CCHHH-------HHHHHHHHHHH-HHHHhhCCeeecCCChhhEEEcCCCeEEEe
Confidence            799999999887643211        11111       12344555554 688999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+....+.
T Consensus       151 d~~~~~~~~~  160 (272)
T cd06629         151 DFGISKKSDD  160 (272)
T ss_pred             eccccccccc
Confidence            9999876543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=97.97  E-value=1.6e-05  Score=76.66  Aligned_cols=74  Identities=22%  Similarity=0.381  Sum_probs=54.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..+.+...-  + +      +..+       ....++..++++ +..++..|++|+|+||.||+++.+|.+.+.
T Consensus        81 ~e~~~~~~L~~~~~~--~-~------~~~~-------~~~~~~~~i~~~-l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~  143 (277)
T cd06642          81 MEYLGGGSALDLLKP--G-P------LEET-------YIATILREILKG-LDYLHSERKIHRDIKAANVLLSEQGDVKLA  143 (277)
T ss_pred             EEccCCCcHHHHhhc--C-C------CCHH-------HHHHHHHHHHHH-HHHHhcCCeeccCCChheEEEeCCCCEEEc
Confidence            789999998876531  1 0      1111       122444544444 677889999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...+...
T Consensus       144 dfg~~~~~~~~  154 (277)
T cd06642         144 DFGVAGQLTDT  154 (277)
T ss_pred             cccccccccCc
Confidence            99999887654

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=97.97  E-value=9.1e-06  Score=90.18  Aligned_cols=74  Identities=26%  Similarity=0.399  Sum_probs=56.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+.|..|.+++.....++        ..       ....++..++.+ +..||..|++|+|++|.||+++.+|++.++
T Consensus        83 mEy~~g~~L~~li~~~~~l~--------~~-------~~~~i~~qil~a-L~yLH~~gIiHrDLKP~NILl~~~g~vkL~  146 (669)
T cd05610          83 MEYLIGGDVKSLLHIYGYFD--------EE-------MAVKYISEVALA-LDYLHRHGIIHRDLKPDNMLISNEGHIKLT  146 (669)
T ss_pred             EeCCCCCCHHHHHHhcCCCC--------HH-------HHHHHHHHHHHH-HHHHHhCCEEeCCccHHHEEEcCCCCEEEE
Confidence            79999999998875422111        11       123455555555 788999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+......
T Consensus       147 DFGls~~~~~  156 (669)
T cd05610         147 DFGLSKVTLN  156 (669)
T ss_pred             eCCCCccccC
Confidence            9999876543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=97.97  E-value=1e-05  Score=76.68  Aligned_cols=74  Identities=22%  Similarity=0.220  Sum_probs=54.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|++|.+......+.+        +.       ....++..++.+ +..+|..|+.|+|++|.|++++.+|.+.++
T Consensus        64 ~e~~~~~~L~~~l~~~~~l~--------~~-------~~~~~~~ql~~~-l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~  127 (237)
T cd05576          64 LQHAEGGKLWSHISKFLNIP--------EE-------CVKRWAAEMVVA-LDALHREGIVCRDLNPNNILLDDRGHIQLT  127 (237)
T ss_pred             EecCCCCCHHHHHHHhcCCC--------HH-------HHHHHHHHHHHH-HHHHHhCCeeccCCCHHHEEEcCCCCEEEe
Confidence            79999999988765322221        11       123445555544 678899999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||....+..
T Consensus       128 df~~~~~~~~  137 (237)
T cd05576         128 YFSRWSEVED  137 (237)
T ss_pred             cccchhcccc
Confidence            9998765543

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=97.97  E-value=1.4e-05  Score=80.35  Aligned_cols=74  Identities=27%  Similarity=0.337  Sum_probs=53.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHH-cCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLE-TGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~-~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      |||+.|+.|.++.......+         +      .....++..++.+ +..++. .|++|+|++|.||+++.+|.+.+
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~---------~------~~~~~~~~~l~~~-l~~lH~~~~ivH~dlkp~Nili~~~~~~kL  145 (333)
T cd06650          82 MEHMDGGSLDQVLKKAGRIP---------E------QILGKVSIAVIKG-LTYLREKHKIMHRDVKPSNILVNSRGEIKL  145 (333)
T ss_pred             EecCCCCcHHHHHHHcCCCC---------H------HHHHHHHHHHHHH-HHHHHhcCCEEecCCChhhEEEcCCCCEEE
Confidence            79999999998875322111         1      1122344444443 566775 58999999999999999999999


Q ss_pred             Eecccccccch
Q 013370           80 LDFGLLCRMER   90 (444)
Q Consensus        80 LDFGmv~~L~~   90 (444)
                      +|||+...+..
T Consensus       146 ~Dfg~~~~~~~  156 (333)
T cd06650         146 CDFGVSGQLID  156 (333)
T ss_pred             eeCCcchhhhh
Confidence            99999776543

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=97.97  E-value=4.2e-05  Score=75.32  Aligned_cols=79  Identities=19%  Similarity=0.180  Sum_probs=55.0

Q ss_pred             CCCcCCCCcccHHhhcCCC--CC------CCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEc
Q 013370            1 MEWMVGESPTDLISLSTGS--SV------DGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYT   72 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~--~~------~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~   72 (444)
                      |||++|+.|.++.......  ++      .....++..       ....++..++.+ +..+|..|++|+|.+|.|++++
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~qi~~a-l~~LH~~gi~H~dlkp~Nili~  158 (303)
T cd05088          87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ-------QLLHFAADVARG-MDYLSQKQFIHRDLAARNILVG  158 (303)
T ss_pred             EEeCCCCcHHHHHHhcccccccccccccccccCcCCHH-------HHHHHHHHHHHH-HHHHHhCCccccccchheEEec
Confidence            7899999998887543111  00      000011122       223455555555 6788999999999999999999


Q ss_pred             cCCcEEEEecccccc
Q 013370           73 SSGQIGFLDFGLLCR   87 (444)
Q Consensus        73 ~DGrLvlLDFGmv~~   87 (444)
                      .+|++.++|||+...
T Consensus       159 ~~~~~kl~dfg~~~~  173 (303)
T cd05088         159 ENYVAKIADFGLSRG  173 (303)
T ss_pred             CCCcEEeCccccCcc
Confidence            999999999998753

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=97.96  E-value=9.3e-06  Score=78.31  Aligned_cols=76  Identities=22%  Similarity=0.395  Sum_probs=56.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+.|+.+.++.....+..      .+.+       ....++..++.+ +..++..|++|+|++|.||+++.+|.+.++
T Consensus        98 ~e~~~~~~L~~~~~~~~~~~------~~~~-------~~~~~~~qi~~a-l~~LH~~~ivH~dl~~~nili~~~~~~~l~  163 (282)
T cd06636          98 MEFCGAGSVTDLVKNTKGNA------LKED-------WIAYICREILRG-LAHLHAHKVIHRDIKGQNVLLTENAEVKLV  163 (282)
T ss_pred             EEeCCCCcHHHHHHHccCCC------CCHH-------HHHHHHHHHHHH-HHHHHHCCcccCCCCHHHEEECCCCCEEEe
Confidence            79999999998876432111      1111       123455555555 688899999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||....+..
T Consensus       164 dfg~~~~~~~  173 (282)
T cd06636         164 DFGVSAQLDR  173 (282)
T ss_pred             eCcchhhhhc
Confidence            9999876643

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=97.96  E-value=1.2e-05  Score=76.78  Aligned_cols=76  Identities=20%  Similarity=0.230  Sum_probs=56.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.+......+       .++..+       ...++..++.+ +..++..|++|+|+||.|++++.++.+.+.
T Consensus        85 ~e~~~~~~L~~~~~~~~~-------~~~~~~-------~~~~~~~l~~a-l~~lH~~~i~H~dlkp~Nili~~~~~~kl~  149 (268)
T cd05063          85 TEYMENGALDKYLRDHDG-------EFSSYQ-------LVGMLRGIAAG-MKYLSDMNYVHRDLAARNILVNSNLECKVS  149 (268)
T ss_pred             EEcCCCCCHHHHHHhcCC-------CCCHHH-------HHHHHHHHHHH-HHHHHHCCeeccccchhhEEEcCCCcEEEC
Confidence            799999999888754321       111222       22445544444 688899999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...+...
T Consensus       150 dfg~~~~~~~~  160 (268)
T cd05063         150 DFGLSRVLEDD  160 (268)
T ss_pred             CCccceecccc
Confidence            99998877543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=97.96  E-value=0.00013  Score=71.04  Aligned_cols=85  Identities=14%  Similarity=0.146  Sum_probs=56.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCC-Cchhh--HhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGS-STHLD--RQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i-~~~~~--~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrL   77 (444)
                      |||++|..|.+....... ..... ...++  ...... .....++..++.+ +..+|..|++|+|.+|.||+++.+|.+
T Consensus        86 ~e~~~~~~L~~~i~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~i~~~i~~a-l~~lH~~~i~H~dlkp~Nil~~~~~~~  162 (291)
T cd05094          86 FEYMKHGDLNKFLRAHGP-DAMILVDGQPRQAKGELGL-SQMLHIASQIASG-MVYLASQHFVHRDLATRNCLVGANLLV  162 (291)
T ss_pred             EecCCCCcHHHHHHhcCc-ccccccccccccCcCCCCH-HHHHHHHHHHHHH-HHHHHhCCeeecccCcceEEEccCCcE
Confidence            799999999998754211 00000 00000  000111 1123556666665 688899999999999999999999999


Q ss_pred             EEEeccccccc
Q 013370           78 GFLDFGLLCRM   88 (444)
Q Consensus        78 vlLDFGmv~~L   88 (444)
                      .+.|||+...+
T Consensus       163 ~l~dfg~a~~~  173 (291)
T cd05094         163 KIGDFGMSRDV  173 (291)
T ss_pred             EECCCCccccc
Confidence            99999987644

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=97.96  E-value=1.2e-05  Score=76.26  Aligned_cols=76  Identities=21%  Similarity=0.199  Sum_probs=57.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.+......+.+      ++..       ....++..++.+ +..++..|++|+|.+|.|++++.+|.+.+.
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~------~~~~-------~~~~~~~~i~~a-l~~lH~~~i~h~dl~~~nilv~~~~~~kl~  146 (261)
T cd05148          81 TELMEKGSLLAFLRSPEGQV------LPVA-------SLIDMACQVAEG-MAYLEEQNSIHRDLAARNILVGEDLVCKVA  146 (261)
T ss_pred             EeecccCCHHHHHhcCCCCC------CCHH-------HHHHHHHHHHHH-HHHHHHCCeeccccCcceEEEcCCceEEEc
Confidence            79999999998875432211      1111       123556666665 678899999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||....+..
T Consensus       147 d~g~~~~~~~  156 (261)
T cd05148         147 DFGLARLIKE  156 (261)
T ss_pred             cccchhhcCC
Confidence            9999887754

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=97.95  E-value=9.1e-06  Score=78.45  Aligned_cols=74  Identities=22%  Similarity=0.359  Sum_probs=55.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.+.+..... .        ++..+       ...++..++.+ +..++..|++|+|.||+|++++.+|++.+.
T Consensus        81 ~e~~~~~~L~~~i~~~-~--------l~~~~-------~~~~~~~l~~~-l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~  143 (277)
T cd06640          81 MEYLGGGSALDLLRAG-P--------FDEFQ-------IATMLKEILKG-LDYLHSEKKIHRDIKAANVLLSEQGDVKLA  143 (277)
T ss_pred             EecCCCCcHHHHHhcC-C--------CCHHH-------HHHHHHHHHHH-HHHHHhCCccCcCCChhhEEEcCCCCEEEc
Confidence            7999999998876421 1        11111       22344444443 677899999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...+...
T Consensus       144 dfg~~~~~~~~  154 (277)
T cd06640         144 DFGVAGQLTDT  154 (277)
T ss_pred             ccccceeccCC
Confidence            99999877654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=97.95  E-value=8.4e-06  Score=94.08  Aligned_cols=75  Identities=27%  Similarity=0.387  Sum_probs=57.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      ||||+|+.|.++.... ++-.+.               +.++.....-..+..||++|++|+||+|.||+.+.+|-|.|-
T Consensus      1313 MEyC~~GsLa~ll~~g-ri~dE~---------------vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~ 1376 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEHG-RIEDEM---------------VTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYG 1376 (1509)
T ss_pred             HHHhccCcHHHHHHhc-chhhhh---------------HHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEee
Confidence            8999999999998753 221111               122333333344677899999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||....+...
T Consensus      1377 DFGsa~ki~~~ 1387 (1509)
T KOG4645|consen 1377 DFGSAVKIKNN 1387 (1509)
T ss_pred             cccceeEecCc
Confidence            99999988776

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=97.95  E-value=1.7e-05  Score=75.09  Aligned_cols=74  Identities=24%  Similarity=0.399  Sum_probs=56.4

Q ss_pred             CCCcCCCCcccHHhhc-CCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLS-TGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~-~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      |||++|..+.++.... ...        +..       ....++..++.+ +..++..|++|+|++|.||+++.+|.+.+
T Consensus        79 ~e~~~~~~l~~~~~~~~~~l--------~~~-------~~~~~~~ql~~~-l~~lh~~~i~h~dl~p~ni~i~~~~~~~l  142 (262)
T cd06613          79 MEYCGGGSLQDIYQVTRGPL--------SEL-------QIAYVCRETLKG-LAYLHETGKIHRDIKGANILLTEDGDVKL  142 (262)
T ss_pred             EeCCCCCcHHHHHHhhccCC--------CHH-------HHHHHHHHHHHH-HHHHHhCCceecCCChhhEEECCCCCEEE
Confidence            7999999999876543 111        111       123455555555 67889999999999999999999999999


Q ss_pred             Eecccccccch
Q 013370           80 LDFGLLCRMER   90 (444)
Q Consensus        80 LDFGmv~~L~~   90 (444)
                      .|||....++.
T Consensus       143 ~d~g~~~~~~~  153 (262)
T cd06613         143 ADFGVSAQLTA  153 (262)
T ss_pred             Cccccchhhhh
Confidence            99999877654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=97.94  E-value=1.7e-05  Score=75.84  Aligned_cols=74  Identities=19%  Similarity=0.232  Sum_probs=55.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+.|..+.+......+       .++..       ....++..++.+ +..+|..|++|+|++|+||+++.+|++.+.
T Consensus        78 ~e~~~~~~l~~~i~~~~~-------~~~~~-------~~~~~~~~i~~~-l~~lH~~~i~H~dl~p~nili~~~~~~kl~  142 (256)
T cd05113          78 TEYMSNGCLLNYLREHGK-------RFQPS-------QLLEMCKDVCEG-MAYLESKQFIHRDLAARNCLVDDQGCVKVS  142 (256)
T ss_pred             EEcCCCCcHHHHHHhcCC-------CCCHH-------HHHHHHHHHHHH-HHHHHhCCeeccccCcceEEEcCCCCEEEC
Confidence            789999998887643211       01111       123556666655 678899999999999999999999999999


Q ss_pred             ecccccccc
Q 013370           81 DFGLLCRME   89 (444)
Q Consensus        81 DFGmv~~L~   89 (444)
                      |||....+.
T Consensus       143 d~g~~~~~~  151 (256)
T cd05113         143 DFGLSRYVL  151 (256)
T ss_pred             CCccceecC
Confidence            999887653

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=97.94  E-value=1.9e-05  Score=74.39  Aligned_cols=77  Identities=21%  Similarity=0.372  Sum_probs=57.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+.|..|.++..... .      .++..       ....++..++.+ +..++..|++|+|++|+|++++.+|.+.+.
T Consensus        77 ~e~~~~~~L~~~l~~~~-~------~l~~~-------~~~~~~~~l~~~-l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~  141 (256)
T cd06612          77 MEYCGAGSVSDIMKITN-K------TLTEE-------EIAAILYQTLKG-LEYLHSNKKIHRDIKAGNILLNEEGQAKLA  141 (256)
T ss_pred             EecCCCCcHHHHHHhCc-c------CCCHH-------HHHHHHHHHHHH-HHHHHHCCcccCCCCcceEEECCCCcEEEc
Confidence            68999999998875321 0      11111       123455555555 678899999999999999999999999999


Q ss_pred             ecccccccchhh
Q 013370           81 DFGLLCRMERKH   92 (444)
Q Consensus        81 DFGmv~~L~~~~   92 (444)
                      |||+...++...
T Consensus       142 dfg~~~~~~~~~  153 (256)
T cd06612         142 DFGVSGQLTDTM  153 (256)
T ss_pred             ccccchhcccCc
Confidence            999998876543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=97.94  E-value=9.2e-06  Score=81.81  Aligned_cols=49  Identities=29%  Similarity=0.422  Sum_probs=41.8

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      .++..++++ +..+|..|++|+|++|+||+++.+|++.+.|||+......
T Consensus       123 ~~~~qi~~a-L~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~  171 (355)
T cd07874         123 YLLYQMLCG-IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT  171 (355)
T ss_pred             HHHHHHHHH-HHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCC
Confidence            455555544 7889999999999999999999999999999999877654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=97.93  E-value=1.7e-05  Score=74.88  Aligned_cols=75  Identities=16%  Similarity=0.101  Sum_probs=55.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCC-----
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG-----   75 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DG-----   75 (444)
                      |||++|++|.++.....+ .      .+...       ...++..++.+ +..+|..|++|+|.+|.|++++.+|     
T Consensus        79 ~e~~~~~~L~~~l~~~~~-~------~~~~~-------~~~~~~~i~~~-l~~LH~~~i~H~dlkp~Nill~~~~~~~~~  143 (259)
T cd05037          79 EEYVKFGPLDVFLHREKN-N------VSLHW-------KLDVAKQLASA-LHYLEDKKLVHGNVCGKNILVARYGLNEGY  143 (259)
T ss_pred             EEcCCCCcHHHHHHhhcc-C------CCHHH-------HHHHHHHHHHH-HHHHhhCCeecccCccceEEEecCccccCC
Confidence            799999999988764321 0      11111       22445555554 6888999999999999999999888     


Q ss_pred             --cEEEEecccccccch
Q 013370           76 --QIGFLDFGLLCRMER   90 (444)
Q Consensus        76 --rLvlLDFGmv~~L~~   90 (444)
                        .+.+.|||+...+..
T Consensus       144 ~~~~kl~Dfg~a~~~~~  160 (259)
T cd05037         144 VPFIKLSDPGIPITVLS  160 (259)
T ss_pred             ceeEEeCCCCccccccc
Confidence              799999999877654

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=97.93  E-value=1.7e-05  Score=78.35  Aligned_cols=74  Identities=27%  Similarity=0.359  Sum_probs=53.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHH-cCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLE-TGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~-~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      |||++|+.|.++.......+        ...       ...++..++.+ +..++. .|++|+|++|.|++++++|.+.+
T Consensus        78 ~ey~~~~~L~~~l~~~~~~~--------~~~-------~~~~~~~i~~~-l~~lH~~~~i~H~dl~p~nil~~~~~~~~l  141 (308)
T cd06615          78 MEHMDGGSLDQVLKKAGRIP--------ENI-------LGKISIAVLRG-LTYLREKHKIMHRDVKPSNILVNSRGEIKL  141 (308)
T ss_pred             eeccCCCcHHHHHHhcCCCC--------HHH-------HHHHHHHHHHH-HHHHHhhCCEEECCCChHHEEEecCCcEEE
Confidence            79999999998875332111        111       22344444443 667786 69999999999999999999999


Q ss_pred             Eecccccccch
Q 013370           80 LDFGLLCRMER   90 (444)
Q Consensus        80 LDFGmv~~L~~   90 (444)
                      .|||+...+..
T Consensus       142 ~dfg~~~~~~~  152 (308)
T cd06615         142 CDFGVSGQLID  152 (308)
T ss_pred             ccCCCcccccc
Confidence            99999876644

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=97.93  E-value=1.4e-05  Score=76.95  Aligned_cols=75  Identities=20%  Similarity=0.314  Sum_probs=55.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..+.++.....+.+        ..       ....++..++.+ +..++..|++|+|++|.|++++++|.+.+.
T Consensus        79 ~e~~~~~~l~~~~~~~~~~~--------~~-------~~~~~~~~i~~~-l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~  142 (286)
T cd07846          79 FEFVDHTVLDDLEKYPNGLD--------ES-------RVRKYLFQILRG-IEFCHSHNIIHRDIKPENILVSQSGVVKLC  142 (286)
T ss_pred             EecCCccHHHHHHhccCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCccccCCCHHHEEECCCCcEEEE
Confidence            68999988877654321111        11       123455555554 678899999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...+...
T Consensus       143 dfg~~~~~~~~  153 (286)
T cd07846         143 DFGFARTLAAP  153 (286)
T ss_pred             eeeeeeeccCC
Confidence            99998876553

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=97.93  E-value=1.5e-05  Score=76.82  Aligned_cols=75  Identities=19%  Similarity=0.205  Sum_probs=54.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.+.+......+       ..+..+       ...++..++.+ +..+|..|++|+|++|.||+++.+|++.+.
T Consensus        87 ~~~~~~g~l~~~l~~~~~-------~~~~~~-------~~~~~~qi~~~-L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~  151 (279)
T cd05109          87 TQLMPYGCLLDYVRENKD-------RIGSQD-------LLNWCVQIAKG-MSYLEEVRLVHRDLAARNVLVKSPNHVKIT  151 (279)
T ss_pred             EEcCCCCCHHHHHhhccC-------CCCHHH-------HHHHHHHHHHH-HHHHHHCCeeccccccceEEEcCCCcEEEC
Confidence            688899888877643211       011222       22445555554 778899999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||....++.
T Consensus       152 dfG~~~~~~~  161 (279)
T cd05109         152 DFGLARLLDI  161 (279)
T ss_pred             CCCceeeccc
Confidence            9999887754

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=97.93  E-value=9.9e-06  Score=77.39  Aligned_cols=79  Identities=15%  Similarity=0.205  Sum_probs=54.8

Q ss_pred             CCCcCCCCcccHHhhcC-CCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLST-GSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~-G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      |||+.|+.+.+...... +....   .++..       ....++..++.+ +..+|..|++|+|++|.||+++.+|.+.+
T Consensus        85 ~e~~~~~~l~~~~~~~~~~~~~~---~~~~~-------~~~~~~~~i~~~-l~~lH~~~i~H~dlkp~Nil~~~~~~~kl  153 (272)
T cd05075          85 LPFMKHGDLHSFLLYSRLGDCPQ---YLPTQ-------MLVKFMTDIASG-MEYLSSKSFIHRDLAARNCMLNENMNVCV  153 (272)
T ss_pred             EEeCCCCcHHHHHHHhcccCCcc---cCCHH-------HHHHHHHHHHHH-HHHHHHCCeeccccchhheEEcCCCCEEE
Confidence            68888888877654321 11100   01111       123455555554 68889999999999999999999999999


Q ss_pred             Eecccccccch
Q 013370           80 LDFGLLCRMER   90 (444)
Q Consensus        80 LDFGmv~~L~~   90 (444)
                      .|||....+..
T Consensus       154 ~Dfg~~~~~~~  164 (272)
T cd05075         154 ADFGLSKKIYN  164 (272)
T ss_pred             CCCCcccccCc
Confidence            99999877654

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=97.93  E-value=1.4e-05  Score=76.01  Aligned_cols=74  Identities=23%  Similarity=0.265  Sum_probs=55.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.+......+       .++...       ...++..++++ +..++..|++|+|.+|.|++++.+|.+.+.
T Consensus        78 ~e~~~~~~L~~~l~~~~~-------~~~~~~-------~~~i~~qi~~~-l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~  142 (256)
T cd05059          78 TEYMANGCLLNYLRERKG-------KLGTEW-------LLDMCSDVCEA-MEYLESNGFIHRDLAARNCLVGEDNVVKVS  142 (256)
T ss_pred             EecCCCCCHHHHHHhccc-------CCCHHH-------HHHHHHHHHHH-HHHHHHCCcccccccHhhEEECCCCcEEEC
Confidence            789999999887653221       011111       23455555555 678899999999999999999999999999


Q ss_pred             ecccccccc
Q 013370           81 DFGLLCRME   89 (444)
Q Consensus        81 DFGmv~~L~   89 (444)
                      |||+...+.
T Consensus       143 dfg~~~~~~  151 (256)
T cd05059         143 DFGLARYVL  151 (256)
T ss_pred             Ccccceecc
Confidence            999987654

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=97.92  E-value=1.9e-05  Score=76.12  Aligned_cols=82  Identities=12%  Similarity=0.127  Sum_probs=55.2

Q ss_pred             CCCcCCCCcccHHhhcC-CCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLST-GSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~-G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      |||++|+.|.++..... .......     ...... .....++..++.+ +..+|..|++|+|++|.||+++++|++.+
T Consensus        88 ~e~~~~~~L~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~l~~~-l~~lH~~~~vH~dlkp~Nil~~~~~~~~l  160 (277)
T cd05062          88 MELMTRGDLKSYLRSLRPEMENNPV-----QAPPSL-KKMIQMAGEIADG-MAYLNANKFVHRDLAARNCMVAEDFTVKI  160 (277)
T ss_pred             EecCCCCCHHHHHHHcCcccccccc-----ccCCCH-HHHHHHHHHHHHH-HHHHHHCCcccCCcchheEEEcCCCCEEE
Confidence            79999999998865321 1110000     000011 1123445555555 68889999999999999999999999999


Q ss_pred             Eecccccccc
Q 013370           80 LDFGLLCRME   89 (444)
Q Consensus        80 LDFGmv~~L~   89 (444)
                      +|||....+.
T Consensus       161 ~dfg~~~~~~  170 (277)
T cd05062         161 GDFGMTRDIY  170 (277)
T ss_pred             CCCCCccccC
Confidence            9999876553

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=97.92  E-value=1.8e-05  Score=76.91  Aligned_cols=72  Identities=25%  Similarity=0.392  Sum_probs=53.4

Q ss_pred             CCCcCCCCcccHHhhc-CCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLS-TGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~-~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      |||++|..+.++.... .+++        +.       ....++..++.+ +..++..|++|+|++|.||+++.+|++.+
T Consensus        88 ~e~~~~~~l~~~~~~~~~~l~--------~~-------~~~~~~~ql~~~-l~~lH~~~i~H~dlkp~Nili~~~~~~kl  151 (292)
T cd06644          88 IEFCPGGAVDAIMLELDRGLT--------EP-------QIQVICRQMLEA-LQYLHSMKIIHRDLKAGNVLLTLDGDIKL  151 (292)
T ss_pred             EecCCCCcHHHHHHhhcCCCC--------HH-------HHHHHHHHHHHH-HHHHhcCCeeecCCCcceEEEcCCCCEEE
Confidence            7999999887765321 1111        11       123455555555 67889999999999999999999999999


Q ss_pred             Eeccccccc
Q 013370           80 LDFGLLCRM   88 (444)
Q Consensus        80 LDFGmv~~L   88 (444)
                      +|||+....
T Consensus       152 ~dfg~~~~~  160 (292)
T cd06644         152 ADFGVSAKN  160 (292)
T ss_pred             ccCccceec
Confidence            999987654

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=97.92  E-value=1.7e-05  Score=75.98  Aligned_cols=75  Identities=21%  Similarity=0.225  Sum_probs=56.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.++.....+.       ++..+       ...++..++++ +..+|+.|++|+|++|.|+++++++++.+.
T Consensus        84 ~e~~~~~~L~~~l~~~~~~-------~~~~~-------~~~i~~~l~~a-l~~lH~~g~~H~dl~p~nili~~~~~~kl~  148 (269)
T cd05065          84 TEFMENGALDSFLRQNDGQ-------FTVIQ-------LVGMLRGIAAG-MKYLSEMNYVHRDLAARNILVNSNLVCKVS  148 (269)
T ss_pred             EecCCCCcHHHHHhhCCCC-------CCHHH-------HHHHHHHHHHH-HHHHHHCCEeecccChheEEEcCCCcEEEC
Confidence            7999999998876543211       11111       23455666655 678899999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||....+..
T Consensus       149 dfg~~~~~~~  158 (269)
T cd05065         149 DFGLSRFLED  158 (269)
T ss_pred             CCcccccccc
Confidence            9998776543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=97.91  E-value=1.2e-05  Score=77.44  Aligned_cols=78  Identities=21%  Similarity=0.289  Sum_probs=55.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.+|.++..-.....    ...+.       .....++..++.+ +..+|..|++|+|++|+||+++++|.+.++
T Consensus        99 ~e~~~~~~L~~~l~~~~~~~----~~~~~-------~~~~~~~~~i~~~-l~~lH~~~i~H~dlkp~nili~~~~~~kl~  166 (286)
T cd06638          99 LELCNGGSVTDLVKGFLKRG----ERMEE-------PIIAYILHEALMG-LQHLHVNKTIHRDVKGNNILLTTEGGVKLV  166 (286)
T ss_pred             EeecCCCCHHHHHHHhhccC----ccccH-------HHHHHHHHHHHHH-HHHHHhCCccccCCCHHhEEECCCCCEEEc
Confidence            79999999998754210000    00111       1123445555544 678899999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||....+..
T Consensus       167 dfg~~~~~~~  176 (286)
T cd06638         167 DFGVSAQLTS  176 (286)
T ss_pred             cCCceeeccc
Confidence            9999877654

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=97.90  E-value=2e-05  Score=76.16  Aligned_cols=73  Identities=22%  Similarity=0.195  Sum_probs=55.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.++.+..... .+        +..+       ...++..++.+ +..+|..|++|+|.+|.||++++++.+.+.
T Consensus        87 ~e~~~~~~l~~~~~~~-~l--------~~~~-------~~~i~~~l~~~-l~~lH~~~i~H~dlkp~Nili~~~~~~~l~  149 (283)
T cd05080          87 MEYVPLGSLRDYLPKH-KL--------NLAQ-------LLLFAQQICEG-MAYLHSQHYIHRDLAARNVLLDNDRLVKIG  149 (283)
T ss_pred             ecCCCCCCHHHHHHHc-CC--------CHHH-------HHHHHHHHHHH-HHHHHHCCeeccccChheEEEcCCCcEEEe
Confidence            7999999998876421 11        1122       23455555555 688899999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...++.
T Consensus       150 dfg~~~~~~~  159 (283)
T cd05080         150 DFGLAKAVPE  159 (283)
T ss_pred             ecccccccCC
Confidence            9999877654

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=97.90  E-value=1.6e-05  Score=75.32  Aligned_cols=77  Identities=27%  Similarity=0.312  Sum_probs=56.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+......+..      ++..+       ...++..++.+ +..++..|++|+|++|.||+++.+|.+.+.
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~------~~~~~-------~~~~~~~l~~~-l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~  143 (256)
T cd08221          78 MEYANGGTLYDKIVRQKGQL------FEEEM-------VLWYLFQIVSA-VSYIHKAGILHRDIKTLNIFLTKAGLIKLG  143 (256)
T ss_pred             EEecCCCcHHHHHHhccccC------CCHHH-------HHHHHHHHHHH-HHHHHhCCccccCCChHhEEEeCCCCEEEC
Confidence            79999999998776431111      11111       22444455544 678899999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||....++..
T Consensus       144 d~~~~~~~~~~  154 (256)
T cd08221         144 DFGISKILGSE  154 (256)
T ss_pred             cCcceEEcccc
Confidence            99998776553

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=97.90  E-value=1.1e-05  Score=78.24  Aligned_cols=76  Identities=22%  Similarity=0.346  Sum_probs=55.7

Q ss_pred             CCCcCCCCcccHHhhc--CCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEE
Q 013370            1 MEWMVGESPTDLISLS--TGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~--~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLv   78 (444)
                      |||++|+.|.++....  .+..      ++..       ....++..++.+ +..+|..|++|+|++|+|++++.+|++.
T Consensus       103 ~ey~~~~sL~~~~~~~~~~~~~------~~~~-------~~~~~~~qi~~a-l~~lH~~~ivH~dlkp~nili~~~~~~k  168 (291)
T cd06639         103 LELCNGGSVTELVKGLLICGQR------LDEA-------MISYILYGALLG-LQHLHNNRIIHRDVKGNNILLTTEGGVK  168 (291)
T ss_pred             EEECCCCcHHHHHHHhhhcCCC------CCHH-------HHHHHHHHHHHH-HHHHHhCCeeccCCCHHHEEEcCCCCEE
Confidence            6899999998876531  1111      1111       123455555544 6889999999999999999999999999


Q ss_pred             EEecccccccch
Q 013370           79 FLDFGLLCRMER   90 (444)
Q Consensus        79 lLDFGmv~~L~~   90 (444)
                      ++|||....+..
T Consensus       169 l~dfg~~~~~~~  180 (291)
T cd06639         169 LVDFGVSAQLTS  180 (291)
T ss_pred             Eeecccchhccc
Confidence            999999877654

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=97.89  E-value=1.6e-05  Score=76.22  Aligned_cols=75  Identities=21%  Similarity=0.223  Sum_probs=56.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.++.+......+       .++..       ....++..++.+ +..++..|++|+|++|.||+++.+|.+.+.
T Consensus        87 ~e~~~~~~l~~~l~~~~~-------~~~~~-------~~~~~~~~l~~a-L~~lH~~~i~H~dl~p~nil~~~~~~~~l~  151 (284)
T cd05038          87 MEYLPSGSLRDYLQRHRD-------QINLK-------RLLLFSSQICKG-MDYLGSQRYIHRDLAARNILVESEDLVKIS  151 (284)
T ss_pred             EecCCCCCHHHHHHhCcc-------ccCHH-------HHHHHHHHHHHH-HHHHHhCCeecCCCCHHhEEEcCCCCEEEc
Confidence            789999999888753210       01111       123455555555 678899999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+..
T Consensus       152 dfg~~~~~~~  161 (284)
T cd05038         152 DFGLAKVLPE  161 (284)
T ss_pred             cccccccccc
Confidence            9999988764

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=97.89  E-value=2.1e-05  Score=74.74  Aligned_cols=75  Identities=16%  Similarity=0.116  Sum_probs=56.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.+|.+.......        .+...       ...++..++++ +..++..|++|+|.+|.|++++.+|.+.+.
T Consensus        74 ~e~~~~~~L~~~l~~~~~--------~~~~~-------~~~~~~qi~~~-l~~lh~~~i~H~di~p~nili~~~~~~kl~  137 (257)
T cd05060          74 MELAPLGPLLKYLKKRRE--------IPVSD-------LKELAHQVAMG-MAYLESKHFVHRDLAARNVLLVNRHQAKIS  137 (257)
T ss_pred             EEeCCCCcHHHHHHhCCC--------CCHHH-------HHHHHHHHHHH-HHHHhhcCeeccCcccceEEEcCCCcEEec
Confidence            789999999887653211        11111       23556666666 678899999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||....+...
T Consensus       138 df~~~~~~~~~  148 (257)
T cd05060         138 DFGMSRALGAG  148 (257)
T ss_pred             cccccceeecC
Confidence            99998877543

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=97.89  E-value=1.7e-05  Score=78.50  Aligned_cols=48  Identities=21%  Similarity=0.274  Sum_probs=41.1

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccc
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME   89 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~   89 (444)
                      .++..++.+ +..+|..|++|+|++|.||+++.+|++.+.|||+.....
T Consensus       107 ~i~~qi~~a-L~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~  154 (338)
T cd07859         107 FFLYQLLRA-LKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF  154 (338)
T ss_pred             HHHHHHHHH-HHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccc
Confidence            455555554 788999999999999999999999999999999987653

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=97.89  E-value=0.00012  Score=70.88  Aligned_cols=73  Identities=29%  Similarity=0.319  Sum_probs=52.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHH-cCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLE-TGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~-~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      |||++|+++.++.......+        ..       ....++..++.+ +..++. +|++|+|++|.|++++.+|++.+
T Consensus        82 ~e~~~~~~L~~~~~~~~~~~--------~~-------~~~~~~~~i~~~-l~~LH~~~~i~H~dl~p~nil~~~~~~~~l  145 (284)
T cd06620          82 MEFMDCGSLDRIYKKGGPIP--------VE-------ILGKIAVAVVEG-LTYLYNVHRIMHRDIKPSNILVNSRGQIKL  145 (284)
T ss_pred             EecCCCCCHHHHHHhccCCC--------HH-------HHHHHHHHHHHH-HHHHHHhcCeeccCCCHHHEEECCCCcEEE
Confidence            79999999988764321111        11       122344444444 566775 69999999999999999999999


Q ss_pred             Eecccccccc
Q 013370           80 LDFGLLCRME   89 (444)
Q Consensus        80 LDFGmv~~L~   89 (444)
                      .|||+...+.
T Consensus       146 ~d~gl~~~~~  155 (284)
T cd06620         146 CDFGVSGELI  155 (284)
T ss_pred             ccCCcccchh
Confidence            9999987653

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=97.88  E-value=2e-05  Score=75.27  Aligned_cols=76  Identities=24%  Similarity=0.312  Sum_probs=56.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.++.+......+..      .      +. .....++..++.+ +..+|..|++|+|++|.|++++++|.+.+.
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~------~------~~-~~~~~~~~~l~~a-L~~lH~~~i~H~dl~p~ni~i~~~~~~~l~  144 (260)
T cd05073          79 TEFMAKGSLLDFLKSDEGSK------Q------PL-PKLIDFSAQIAEG-MAFIEQRNYIHRDLRAANILVSASLVCKIA  144 (260)
T ss_pred             EEeCCCCcHHHHHHhCCccc------c------CH-HHHHHHHHHHHHH-HHHHHhCCccccccCcceEEEcCCCcEEEC
Confidence            78999999988865322111      0      11 1123455555555 678899999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||....+..
T Consensus       145 d~~~~~~~~~  154 (260)
T cd05073         145 DFGLARVIED  154 (260)
T ss_pred             CCcceeeccC
Confidence            9999877654

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=97.88  E-value=1.6e-05  Score=75.91  Aligned_cols=73  Identities=25%  Similarity=0.267  Sum_probs=54.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+........        +...       ...++..++.+ +..+|..|++|+|++|.||+++++|.+.+.
T Consensus        85 ~e~~~~~~L~~~l~~~~~~--------~~~~-------~~~~~~~l~~~-l~~lH~~~i~H~dl~p~nil~~~~~~~~l~  148 (265)
T cd06652          85 MEHMPGGSIKDQLKSYGAL--------TENV-------TRKYTRQILEG-VSYLHSNMIVHRDIKGANILRDSVGNVKLG  148 (265)
T ss_pred             EEecCCCcHHHHHHHcCCC--------CHHH-------HHHHHHHHHHH-HHHHHhCCEecCCCCHHHEEecCCCCEEEC
Confidence            6899999998876432111        1111       12455555444 688899999999999999999999999999


Q ss_pred             ecccccccc
Q 013370           81 DFGLLCRME   89 (444)
Q Consensus        81 DFGmv~~L~   89 (444)
                      |||+...+.
T Consensus       149 Dfg~~~~~~  157 (265)
T cd06652         149 DFGASKRLQ  157 (265)
T ss_pred             cCccccccc
Confidence            999887654

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=97.88  E-value=2.5e-05  Score=76.64  Aligned_cols=73  Identities=25%  Similarity=0.460  Sum_probs=54.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..+.++.... .        +...       ....++..++.+ +..+|..|++|+|++|.|++++.+|++.+.
T Consensus        98 ~e~~~~~~L~~~~~~~-~--------l~~~-------~~~~~~~qi~~~-l~~LH~~~ivH~dlkp~Nill~~~~~~kL~  160 (292)
T cd06658          98 MEFLEGGALTDIVTHT-R--------MNEE-------QIATVCLSVLRA-LSYLHNQGVIHRDIKSDSILLTSDGRIKLS  160 (292)
T ss_pred             EeCCCCCcHHHHHhcC-C--------CCHH-------HHHHHHHHHHHH-HHHHHHCCEeecCCCHHHEEEcCCCCEEEc
Confidence            7999999988875321 1        1111       123455555555 688999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||....+..
T Consensus       161 dfg~~~~~~~  170 (292)
T cd06658         161 DFGFCAQVSK  170 (292)
T ss_pred             cCcchhhccc
Confidence            9998876544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=97.88  E-value=1.8e-05  Score=76.68  Aligned_cols=71  Identities=27%  Similarity=0.364  Sum_probs=53.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..+......            ++.       ....++..++.+ +..+|..|+.|+|++|.|++++.+|.+.+.
T Consensus        78 ~e~~~~~~l~~~~~~------------~~~-------~~~~~~~qi~~~-l~~lH~~~i~H~dlkp~Nill~~~~~~~l~  137 (279)
T cd06619          78 TEFMDGGSLDVYRKI------------PEH-------VLGRIAVAVVKG-LTYLWSLKILHRDVKPSNMLVNTRGQVKLC  137 (279)
T ss_pred             EecCCCCChHHhhcC------------CHH-------HHHHHHHHHHHH-HHHHHHCCEeeCCCCHHHEEECCCCCEEEe
Confidence            689999877543211            111       123455555555 688999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||....+...
T Consensus       138 dfg~~~~~~~~  148 (279)
T cd06619         138 DFGVSTQLVNS  148 (279)
T ss_pred             eCCcceecccc
Confidence            99998776543

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.88  E-value=1.4e-05  Score=75.90  Aligned_cols=62  Identities=31%  Similarity=0.444  Sum_probs=44.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      ||||+|..+.|......               .       ++++..= ...--||..|++|+||-+-||++..+ +++||
T Consensus        78 me~I~G~~lkd~l~~~~---------------~-------~~~r~vG-~~vg~lH~~givHGDLTtsNiIl~~~-~i~~I  133 (204)
T COG3642          78 MEYIEGELLKDALEEAR---------------P-------DLLREVG-RLVGKLHKAGIVHGDLTTSNIILSGG-RIYFI  133 (204)
T ss_pred             EEEeCChhHHHHHHhcc---------------h-------HHHHHHH-HHHHHHHhcCeecCCCccceEEEeCC-cEEEE
Confidence            89999999998765320               1       1111111 12345799999999999999998754 49999


Q ss_pred             eccccc
Q 013370           81 DFGLLC   86 (444)
Q Consensus        81 DFGmv~   86 (444)
                      |||+-.
T Consensus       134 DfGLg~  139 (204)
T COG3642         134 DFGLGE  139 (204)
T ss_pred             ECCccc
Confidence            999964

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=97.88  E-value=1.9e-05  Score=75.21  Aligned_cols=76  Identities=21%  Similarity=0.286  Sum_probs=56.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+.|+.+.+......+..      ++..+       ...++..++.+ +..+|..|++|+|++|.|++++.+|.+.+.
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~------~~~~~-------~~~i~~~i~~a-l~~LH~~~i~H~dl~p~ni~i~~~~~~~l~  144 (260)
T cd05067          79 TEYMENGSLVDFLKTPEGIK------LTINK-------LIDMAAQIAEG-MAFIERKNYIHRDLRAANILVSETLCCKIA  144 (260)
T ss_pred             EEcCCCCCHHHHHHhcCCCC------CCHHH-------HHHHHHHHHHH-HHHHhcCCeecccccHHhEEEcCCCCEEEc
Confidence            78999999988765332211      11111       22445555554 688999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||....++.
T Consensus       145 dfg~~~~~~~  154 (260)
T cd05067         145 DFGLARLIED  154 (260)
T ss_pred             cCcceeecCC
Confidence            9999987763

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=97.87  E-value=1.4e-05  Score=76.11  Aligned_cols=79  Identities=18%  Similarity=0.227  Sum_probs=56.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.+.++........    ..++.++       ...++..++.+ +..++..|++|+|++|.|++++.+|.+.++
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~----~~~~~~~-------~~~~~~~i~~~-l~~LH~~~i~H~dl~~~nil~~~~~~~~l~  148 (267)
T cd08228          81 LELADAGDLSQMIKYFKKQK----RLIPERT-------VWKYFVQLCSA-VEHMHSRRVMHRDIKPANVFITATGVVKLG  148 (267)
T ss_pred             EEecCCCcHHHHHHHhhhcc----CCCCHHH-------HHHHHHHHHHH-HHHHhhCCeeCCCCCHHHEEEcCCCCEEEC
Confidence            68999999888765321000    0111111       23455555554 677899999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...++..
T Consensus       149 d~g~~~~~~~~  159 (267)
T cd08228         149 DLGLGRFFSSK  159 (267)
T ss_pred             ccccceeccch
Confidence            99998876543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=97.87  E-value=1.4e-05  Score=75.84  Aligned_cols=76  Identities=24%  Similarity=0.365  Sum_probs=56.5

Q ss_pred             CCCcCCCCcccHHhhcC--CCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEE
Q 013370            1 MEWMVGESPTDLISLST--GSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~--G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLv   78 (444)
                      |||++|.++.++.....  +.+      ++.       .....++..++++ +..++..|++|+|++|.||+++.+|.+.
T Consensus        88 ~e~~~~~~L~~~~~~~~~~~~~------~~~-------~~~~~~~~ql~~a-l~~lH~~~i~H~~l~p~ni~~~~~~~~~  153 (275)
T cd06608          88 MELCGGGSVTDLVKGLRKKGKR------LKE-------EWIAYILRETLRG-LAYLHENKVIHRDIKGQNILLTKNAEVK  153 (275)
T ss_pred             EEcCCCCcHHHHHHHHhhcCCC------CCH-------HHHHHHHHHHHHH-HHHHhcCCcccCCCCHHHEEEccCCeEE
Confidence            79999999988865321  110      111       1123455556655 6788999999999999999999999999


Q ss_pred             EEecccccccch
Q 013370           79 FLDFGLLCRMER   90 (444)
Q Consensus        79 lLDFGmv~~L~~   90 (444)
                      ++|||+...+..
T Consensus       154 l~d~~~~~~~~~  165 (275)
T cd06608         154 LVDFGVSAQLDS  165 (275)
T ss_pred             ECCCccceeccc
Confidence            999999877654

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=97.87  E-value=2.2e-05  Score=77.61  Aligned_cols=76  Identities=17%  Similarity=0.160  Sum_probs=55.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+.|+.+.+......+       ..+..       ....++..++.+ +..+|..|++|+|++|.||+++.++.+.+.
T Consensus        87 ~e~~~~g~l~~~l~~~~~-------~~~~~-------~~~~~~~qi~~~-L~~LH~~~iiH~dlkp~Nill~~~~~~kl~  151 (316)
T cd05108          87 TQLMPFGCLLDYVREHKD-------NIGSQ-------YLLNWCVQIAKG-MNYLEERRLVHRDLAARNVLVKTPQHVKIT  151 (316)
T ss_pred             eecCCCCCHHHHHHhccc-------cCCHH-------HHHHHHHHHHHH-HHHHHhcCeeccccchhheEecCCCcEEEc
Confidence            678888888887653211       01111       123455555544 788999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||....+...
T Consensus       152 DfG~a~~~~~~  162 (316)
T cd05108         152 DFGLAKLLGAD  162 (316)
T ss_pred             cccccccccCC
Confidence            99999877643

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=97.86  E-value=2.1e-05  Score=74.87  Aligned_cols=76  Identities=24%  Similarity=0.312  Sum_probs=55.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+.|+++.+......+..      .+..       ....++..++.+ +..+|..|++|+|.+|.|++++++|.+.+.
T Consensus        80 ~e~~~~~~L~~~l~~~~~~~------~~~~-------~~~~~~~~l~~~-l~~LH~~~i~H~dl~p~nili~~~~~~~l~  145 (261)
T cd05072          80 TEYMAKGSLLDFLKSDEGGK------VLLP-------KLIDFSAQIAEG-MAYIERKNYIHRDLRAANVLVSESLMCKIA  145 (261)
T ss_pred             EecCCCCcHHHHHHHhcCCC------CCHH-------HHHHHHHHHHHH-HHHHHHCCeeccccchhhEEecCCCcEEEC
Confidence            78999999988775432211      1111       122344444444 688899999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||....++.
T Consensus       146 dfg~~~~~~~  155 (261)
T cd05072         146 DFGLARVIED  155 (261)
T ss_pred             CCccceecCC
Confidence            9999987754

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=97.86  E-value=2.6e-05  Score=75.83  Aligned_cols=83  Identities=13%  Similarity=0.132  Sum_probs=55.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+.|++|.+...-..+... ....   ..... ......++..++.+ +..+|..|+.|+|.+|.||+++.+|.+.+.
T Consensus        88 ~e~~~~g~L~~~l~~~~~~~~-~~~~---~~~~~-~~~~~~~~~~l~~~-l~~lH~~~i~H~dikp~nili~~~~~~~L~  161 (288)
T cd05061          88 MELMAHGDLKSYLRSLRPEAE-NNPG---RPPPT-LQEMIQMAAEIADG-MAYLNAKKFVHRDLAARNCMVAHDFTVKIG  161 (288)
T ss_pred             EeCCCCCCHHHHHHHhccccc-cCCC---CCCCC-HHHHHHHHHHHHHH-HHHHHhCCCcCCCCChheEEEcCCCcEEEC
Confidence            799999999998754221100 0000   00000 01123455555555 678899999999999999999999999999


Q ss_pred             ecccccccc
Q 013370           81 DFGLLCRME   89 (444)
Q Consensus        81 DFGmv~~L~   89 (444)
                      |||+...+.
T Consensus       162 Dfg~~~~~~  170 (288)
T cd05061         162 DFGMTRDIY  170 (288)
T ss_pred             cCCcccccc
Confidence            999877554

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=97.86  E-value=2.3e-05  Score=74.25  Aligned_cols=76  Identities=24%  Similarity=0.354  Sum_probs=57.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.++.......+        .       .....++..++.+ +..++..|++|+|++|+||+++++|.+.+.
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~--------~-------~~~~~i~~~i~~~-l~~lh~~~i~H~dl~~~nil~~~~~~~kl~  141 (264)
T cd06626          78 MEYCSGGTLEELLEHGRILD--------E-------HVIRVYTLQLLEG-LAYLHSHGIVHRDIKPANIFLDHNGVIKLG  141 (264)
T ss_pred             EecCCCCcHHHHHhhcCCCC--------h-------HHHHHHHHHHHHH-HHHHHHCCcccCCCCHHHEEECCCCCEEEc
Confidence            68999999998865321111        1       1123455555555 578899999999999999999999999999


Q ss_pred             ecccccccchhh
Q 013370           81 DFGLLCRMERKH   92 (444)
Q Consensus        81 DFGmv~~L~~~~   92 (444)
                      |||....++...
T Consensus       142 d~g~~~~~~~~~  153 (264)
T cd06626         142 DFGCAVKLKNNT  153 (264)
T ss_pred             ccccccccCCCC
Confidence            999998876543

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=97.86  E-value=6.5e-05  Score=70.79  Aligned_cols=77  Identities=22%  Similarity=0.243  Sum_probs=55.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCC-cEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG-QIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DG-rLvl   79 (444)
                      |||++|.+|.+......+.+      ++..       ....++..++++ +..++..|++|+|++|+||++++++ .+.+
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~------~~~~-------~~~~~~~~i~~~-l~~lh~~~i~h~dl~~~nil~~~~~~~~~l  143 (256)
T cd08220          78 MEYAPGGTLAEYIQKRCNSL------LDED-------TILHFFVQILLA-LHHVHTKLILHRDLKTQNILLDKHKMVVKI  143 (256)
T ss_pred             EecCCCCCHHHHHHHhcccC------CCHH-------HHHHHHHHHHHH-HHHHHhCCeecCCCCHHHEEEcCCCCEEEE
Confidence            79999999998875432211      1111       123445555555 5788999999999999999998665 5789


Q ss_pred             Eecccccccchh
Q 013370           80 LDFGLLCRMERK   91 (444)
Q Consensus        80 LDFGmv~~L~~~   91 (444)
                      .|||+...++..
T Consensus       144 ~d~~~~~~~~~~  155 (256)
T cd08220         144 GDFGISKILSSK  155 (256)
T ss_pred             ccCCCceecCCC
Confidence            999999887654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=97.86  E-value=2.4e-05  Score=74.77  Aligned_cols=74  Identities=24%  Similarity=0.273  Sum_probs=55.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.+......+       .++..+       ...++..++.+ +..++..|++|+|.+|.||+++.+|.+.+.
T Consensus        84 ~e~~~~~~L~~~~~~~~~-------~~~~~~-------~~~~~~~l~~~-l~~Lh~~~i~H~di~p~nili~~~~~~~l~  148 (266)
T cd05033          84 TEYMENGSLDKFLRENDG-------KFTVGQ-------LVGMLRGIASG-MKYLSEMNYVHRDLAARNILVNSNLVCKVS  148 (266)
T ss_pred             EEcCCCCCHHHHHHhccC-------CCCHHH-------HHHHHHHHHHH-HHHHHhCCcccCCCCcceEEEcCCCCEEEC
Confidence            789999999888654221       111111       23455555544 678899999999999999999999999999


Q ss_pred             ecccccccc
Q 013370           81 DFGLLCRME   89 (444)
Q Consensus        81 DFGmv~~L~   89 (444)
                      |||+...+.
T Consensus       149 dfg~~~~~~  157 (266)
T cd05033         149 DFGLSRRLE  157 (266)
T ss_pred             ccchhhccc
Confidence            999998875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=97.86  E-value=2.5e-05  Score=75.92  Aligned_cols=78  Identities=23%  Similarity=0.301  Sum_probs=55.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.+|.++........    ..++.       .....++..++++ +..++..|++|+|++|+|++++.+|.+.+.
T Consensus        80 ~e~~~~~~L~~~l~~~~~~~----~~l~~-------~~~~~i~~~i~~~-L~~lH~~~i~H~dl~~~nil~~~~~~~~l~  147 (287)
T cd06621          80 MEYCEGGSLDSIYKKVKKRG----GRIGE-------KVLGKIAESVLKG-LSYLHSRKIIHRDIKPSNILLTRKGQVKLC  147 (287)
T ss_pred             EEecCCCCHHHHHHHHHhcC----CCCCH-------HHHHHHHHHHHHH-HHHHHHCCcccCCCCHHHEEEecCCeEEEe
Confidence            78999999988754311000    00111       1123556555555 668899999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+..
T Consensus       148 dfg~~~~~~~  157 (287)
T cd06621         148 DFGVSGELVN  157 (287)
T ss_pred             eccccccccc
Confidence            9999876644

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=97.86  E-value=2.5e-05  Score=75.67  Aligned_cols=76  Identities=24%  Similarity=0.417  Sum_probs=57.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.++..... .      .++..+       ...++..++++ +..++..|++|+|++|.||+++.+|.+.++
T Consensus        94 ~e~~~~~~L~~~l~~~~-~------~l~~~~-------~~~i~~~i~~~-L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~  158 (286)
T cd06614          94 MEYMDGGSLTDIITQNF-V------RMNEPQ-------IAYVCREVLQG-LEYLHSQNVIHRDIKSDNILLSKDGSVKLA  158 (286)
T ss_pred             EeccCCCcHHHHHHHhc-c------CCCHHH-------HHHHHHHHHHH-HHHHHhCCeeeCCCChhhEEEcCCCCEEEC
Confidence            68999999999876432 0      111221       23455555555 678899999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||....+...
T Consensus       159 d~~~~~~~~~~  169 (286)
T cd06614         159 DFGFAAQLTKE  169 (286)
T ss_pred             ccchhhhhccc
Confidence            99998766543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=97.85  E-value=1.8e-05  Score=77.94  Aligned_cols=48  Identities=25%  Similarity=0.361  Sum_probs=41.0

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccc
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME   89 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~   89 (444)
                      .++..++.+ +..+|..|++|+|++|.||+++.+|.+.++|||......
T Consensus       108 ~~~~qi~~a-L~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~  155 (309)
T cd07872         108 IFLYQILRG-LAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKS  155 (309)
T ss_pred             HHHHHHHHH-HHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecC
Confidence            455555555 788999999999999999999999999999999987553

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=97.85  E-value=2.2e-05  Score=75.35  Aligned_cols=77  Identities=17%  Similarity=0.098  Sum_probs=53.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|++|.+.........  .. ..+.       .....++..++.+ +..++..|++|+|.+|.|+++++++.+.+.
T Consensus        74 ~e~~~~g~L~~~l~~~~~~~--~~-~~~~-------~~~~~~~~qi~~a-l~~lH~~~i~H~dlkp~nil~~~~~~~kL~  142 (269)
T cd05087          74 MEFCPLGDLKGYLRSCRKAE--LM-TPDP-------TTLQRMACEIALG-LLHLHKNNFIHSDLALRNCLLTADLTVKIG  142 (269)
T ss_pred             EECCCCCcHHHHHHHhhhcc--cc-cccH-------HHHHHHHHHHHHH-HHHHHHCCEeccccCcceEEEcCCCcEEEC
Confidence            79999999988775321100  00 0000       1122344445544 678899999999999999999999999999


Q ss_pred             eccccccc
Q 013370           81 DFGLLCRM   88 (444)
Q Consensus        81 DFGmv~~L   88 (444)
                      |||.....
T Consensus       143 dfg~~~~~  150 (269)
T cd05087         143 DYGLSHNK  150 (269)
T ss_pred             Cccccccc
Confidence            99987543

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=97.85  E-value=2e-05  Score=75.46  Aligned_cols=73  Identities=22%  Similarity=0.287  Sum_probs=54.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.+........+        ..       ...+++..++.+ +..+|..|++|+|.+|+||+++++|.+.+.
T Consensus        85 ~e~~~~~~L~~~~~~~~~l~--------~~-------~~~~~~~~i~~a-l~~LH~~~i~H~dl~p~ni~i~~~~~~~l~  148 (264)
T cd06653          85 VEYMPGGSIKDQLKAYGALT--------EN-------VTRRYTRQILQG-VSYLHSNMIVHRDIKGANILRDSAGNVKLG  148 (264)
T ss_pred             EEeCCCCcHHHHHHHcCCCC--------HH-------HHHHHHHHHHHH-HHHHHhCCEecCCCCHHHEEEcCCCCEEEC
Confidence            68889998887764321111        11       123455555555 678899999999999999999999999999


Q ss_pred             ecccccccc
Q 013370           81 DFGLLCRME   89 (444)
Q Consensus        81 DFGmv~~L~   89 (444)
                      |||....+.
T Consensus       149 dfg~~~~~~  157 (264)
T cd06653         149 DFGASKRIQ  157 (264)
T ss_pred             ccccccccc
Confidence            999988764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=97.85  E-value=4e-05  Score=76.65  Aligned_cols=93  Identities=19%  Similarity=0.274  Sum_probs=69.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      ||+|+|.+|..+.-     +++           ++    .++...+++. ++-+.+.|++|||..+=||+|++||.+++|
T Consensus       186 Me~ieG~eL~~~r~-----~~e-----------n~----~~il~~il~~-~~~~~~~GiVHGDlSefNIlV~~dg~~~vI  244 (304)
T COG0478         186 MEYIEGVELYRLRL-----DVE-----------NP----DEILDKILEE-VRKAYRRGIVHGDLSEFNILVTEDGDIVVI  244 (304)
T ss_pred             eehcccceeecccC-----ccc-----------CH----HHHHHHHHHH-HHHHHHcCccccCCchheEEEecCCCEEEE
Confidence            99999999887631     011           11    1344444444 444569999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCC
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVV  121 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l  121 (444)
                      ||=.+...+.+.-..++       .+|...+.+.|.+-...
T Consensus       245 DwPQ~v~~~hp~a~e~l-------~RDv~nii~yFrrky~~  278 (304)
T COG0478         245 DWPQAVPISHPDAEELL-------ERDVENIIKYFRRKYGY  278 (304)
T ss_pred             eCcccccCCCCCHHHHH-------HhHHHHHHHHHHHhccc
Confidence            99999988876655444       48999999999876444

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=97.85  E-value=0.00018  Score=68.11  Aligned_cols=77  Identities=26%  Similarity=0.318  Sum_probs=55.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+.|.++.+......+.      .+++.+.       .+++..++.+ +..++..|++|+|++|.|++++.++.+.+.
T Consensus        78 ~e~~~~~~l~~~~~~~~~~------~~~~~~~-------~~~~~~l~~~-l~~lh~~~i~h~~l~~~nil~~~~~~~~l~  143 (256)
T cd08218          78 MDYCEGGDLYKKINAQRGV------LFPEDQI-------LDWFVQICLA-LKHVHDRKILHRDIKSQNIFLTKDGTIKLG  143 (256)
T ss_pred             EecCCCCcHHHHHHhccCC------CCCHHHH-------HHHHHHHHHH-HHHHHhCCEecCCCCHHHEEEcCCCCEEEe
Confidence            6899999988876532211      1122222       2344455554 577899999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...+...
T Consensus       144 d~~~~~~~~~~  154 (256)
T cd08218         144 DFGIARVLNST  154 (256)
T ss_pred             eccceeecCcc
Confidence            99998877553

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=97.84  E-value=1.7e-05  Score=79.50  Aligned_cols=116  Identities=19%  Similarity=0.204  Sum_probs=72.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHH--cC--ccccCCCCCCeEEccCCc
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLE--TG--ILHADPHPGNLRYTSSGQ   76 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~--~G--fFHADPHPGNILv~~DGr   76 (444)
                      ||+++++.|+.....-+           ++.+.-+.+.++++-..+..+ +...|-  ..  ++|+|++|+|||++.+|.
T Consensus        99 mE~c~~GDLsqmIk~~K-----------~qkr~ipE~~Vwk~f~QL~~A-L~~cH~~~~r~~VmHRDIKPaNIFl~~~gv  166 (375)
T KOG0591|consen   99 MELCDAGDLSQMIKHFK-----------KQKRLIPEKTVWKYFVQLCRA-LYHCHSKIPRGTVMHRDIKPANIFLTANGV  166 (375)
T ss_pred             HHhhcccCHHHHHHHHH-----------hccccCchHHHHHHHHHHHHH-HHHHhccccccceeeccCcchheEEcCCCc
Confidence            89999999999877531           111111122333433333333 222333  33  899999999999999999


Q ss_pred             EEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHH
Q 013370           77 IGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDL  134 (444)
Q Consensus        77 LvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L  134 (444)
                      +.+=|||+...++.+...  +..+   +---|.--.+.+.+-|+- ...|++++.=-+
T Consensus       167 vKLGDfGL~r~l~s~~tf--A~S~---VGTPyYMSPE~i~~~~Y~-~kSDiWslGCll  218 (375)
T KOG0591|consen  167 VKLGDFGLGRFLSSKTTF--AHSL---VGTPYYMSPERIHESGYN-FKSDIWSLGCLL  218 (375)
T ss_pred             eeeccchhHhHhcchhHH--HHhh---cCCCcccCHHHHhcCCCC-cchhHHHHHHHH
Confidence            999999999998876432  2332   222233335666666665 346888654333

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=97.84  E-value=2.8e-05  Score=71.17  Aligned_cols=75  Identities=29%  Similarity=0.390  Sum_probs=56.2

Q ss_pred             CCCcCCCCcccHHhhcCC-CCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLSTG-SSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G-~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      |||++|.+|.+......+ .+        ..       ....++..++++ +..++..|++|+|++|.|+++++++++.+
T Consensus        76 ~e~~~~~~L~~~~~~~~~~~~--------~~-------~~~~~~~~l~~~-l~~lh~~~i~h~di~~~ni~v~~~~~~~l  139 (225)
T smart00221       76 MEYCEGGDLFDYLRKKGGKLS--------EE-------EARFYLRQILEA-LEYLHSLGIVHRDLKPENILLGMDGLVKL  139 (225)
T ss_pred             EeccCCCCHHHHHHhcccCCC--------HH-------HHHHHHHHHHHH-HHHHHhCCeecCCCCHHHEEEcCCCCEEE
Confidence            689999888887654321 11        11       123445555554 57789999999999999999999999999


Q ss_pred             Eecccccccchh
Q 013370           80 LDFGLLCRMERK   91 (444)
Q Consensus        80 LDFGmv~~L~~~   91 (444)
                      +|||....+...
T Consensus       140 ~d~g~~~~~~~~  151 (225)
T smart00221      140 ADFGLARFIHRD  151 (225)
T ss_pred             eeCceeeEecCc
Confidence            999999888664

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=97.84  E-value=5.6e-05  Score=75.28  Aligned_cols=46  Identities=15%  Similarity=0.150  Sum_probs=37.2

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEcc-------CCcEEEEecccccc
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTS-------SGQIGFLDFGLLCR   87 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~-------DGrLvlLDFGmv~~   87 (444)
                      ++.+. +-.++.+||..|++|+|.+|+||+++.       ++++.+||||.+..
T Consensus       142 ~ll~~-la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~  194 (268)
T PRK15123        142 MLIKR-VATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI  194 (268)
T ss_pred             HHHHH-HHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence            34444 334588999999999999999999985       46899999999853

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=97.84  E-value=2.2e-05  Score=75.45  Aligned_cols=76  Identities=18%  Similarity=0.263  Sum_probs=55.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..+..+.....+.+        .+       ....++..++.+ +..++..|++|+|++|.||+++.+|.+.+.
T Consensus        79 ~e~~~~~~l~~~~~~~~~~~--------~~-------~~~~~~~~i~~~-l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~  142 (288)
T cd07833          79 FEYVERTLLELLEASPGGLP--------PD-------AVRSYIWQLLQA-IAYCHSHNIIHRDIKPENILVSESGVLKLC  142 (288)
T ss_pred             EecCCCCHHHHHHhcCCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCeecCCCCHHHeEECCCCCEEEE
Confidence            68998876665543221111        11       123455555544 788999999999999999999999999999


Q ss_pred             ecccccccchhh
Q 013370           81 DFGLLCRMERKH   92 (444)
Q Consensus        81 DFGmv~~L~~~~   92 (444)
                      |||....+....
T Consensus       143 d~g~~~~~~~~~  154 (288)
T cd07833         143 DFGFARALRARP  154 (288)
T ss_pred             eeecccccCCCc
Confidence            999988876654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=97.84  E-value=2.6e-05  Score=74.88  Aligned_cols=75  Identities=21%  Similarity=0.374  Sum_probs=56.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+ |.+|.+......+ +      ++..+       ...++..++.+ +..++..|++|+|++|.||+++++|.+.+.
T Consensus        78 ~e~~-~~~L~~~~~~~~~-~------~~~~~-------~~~~~~~i~~~-l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~  141 (286)
T cd07832          78 MEYM-PSDLSEVLRDEER-P------LPEAQ-------VKSYMRMLLKG-VAYMHANGIMHRDLKPANLLISADGVLKIA  141 (286)
T ss_pred             eccc-CCCHHHHHHhcCC-C------CCHHH-------HHHHHHHHHHH-HHHHHHCCeecCCcCHHHEEEcCCCcEEEe
Confidence            7899 9988887653210 0      11221       23455555555 678899999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...+...
T Consensus       142 dfg~~~~~~~~  152 (286)
T cd07832         142 DFGLARLFSEE  152 (286)
T ss_pred             eeeecccccCC
Confidence            99998877654

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=97.84  E-value=2.6e-05  Score=75.19  Aligned_cols=75  Identities=17%  Similarity=0.179  Sum_probs=56.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+.|+++.+......+       .+++..       ...++..++.+ +..+|..|++|+|.+|.||+++.+|.+.+.
T Consensus        87 ~e~~~~g~L~~~l~~~~~-------~~~~~~-------~~~~~~qi~~~-l~~LH~~~i~H~di~p~nil~~~~~~~kL~  151 (279)
T cd05057          87 TQLMPLGCLLDYVRNHKD-------NIGSQY-------LLNWCVQIAKG-MSYLEEKRLVHRDLAARNVLVKTPQHVKIT  151 (279)
T ss_pred             EecCCCCcHHHHHHhccC-------CCCHHH-------HHHHHHHHHHH-HHHHHhCCEEecccCcceEEEcCCCeEEEC
Confidence            689999999987653211       011221       23455555554 688899999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||....+..
T Consensus       152 dfg~~~~~~~  161 (279)
T cd05057         152 DFGLAKLLDV  161 (279)
T ss_pred             CCcccccccC
Confidence            9999887764

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=97.83  E-value=2.8e-05  Score=73.92  Aligned_cols=74  Identities=20%  Similarity=0.267  Sum_probs=54.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+......+       ..+.+.       ...++..++.+ +..++..|++|+|.+|+|++++.+|.+.+.
T Consensus        78 ~e~~~~~~L~~~~~~~~~-------~~~~~~-------~~~~~~~i~~~-l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~  142 (256)
T cd05114          78 TEFMENGCLLNYLRQRQG-------KLSKDM-------LLSMCQDVCEG-MEYLERNSFIHRDLAARNCLVSSTGVVKVS  142 (256)
T ss_pred             EEcCCCCcHHHHHHhCcc-------CCCHHH-------HHHHHHHHHHH-HHHHHHCCccccccCcceEEEcCCCeEEEC
Confidence            799999999887643211       111111       23455555544 678899999999999999999999999999


Q ss_pred             ecccccccc
Q 013370           81 DFGLLCRME   89 (444)
Q Consensus        81 DFGmv~~L~   89 (444)
                      |||....+.
T Consensus       143 d~g~~~~~~  151 (256)
T cd05114         143 DFGMTRYVL  151 (256)
T ss_pred             CCCCccccC
Confidence            999887654

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=97.83  E-value=2.4e-05  Score=76.73  Aligned_cols=87  Identities=13%  Similarity=0.195  Sum_probs=58.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCC---CCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcE
Q 013370            1 MEWMVGESPTDLISLSTGSSVD---GSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~---~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrL   77 (444)
                      |||+.|.+|.++..........   .+.. .+...... ..+..++..++.+ +..+|..|++|+|++|.||+++.+|.+
T Consensus       100 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~qi~~a-l~~LH~~givH~dlkp~Nili~~~~~~  176 (304)
T cd05101         100 VEYASKGNLREYLRARRPPGMEYSYDIAR-VPDEQMTF-KDLVSCTYQVARG-MEYLASQKCIHRDLAARNVLVTENNVM  176 (304)
T ss_pred             EecCCCCcHHHHHHhcCCccccccccccc-CCcccccH-HHHHHHHHHHHHH-HHHHHHCCeeecccccceEEEcCCCcE
Confidence            7999999999887643211000   0000 00111111 1123455555555 688999999999999999999999999


Q ss_pred             EEEecccccccch
Q 013370           78 GFLDFGLLCRMER   90 (444)
Q Consensus        78 vlLDFGmv~~L~~   90 (444)
                      .+.|||....+..
T Consensus       177 kl~D~g~~~~~~~  189 (304)
T cd05101         177 KIADFGLARDVNN  189 (304)
T ss_pred             EECCCccceeccc
Confidence            9999999887754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=97.83  E-value=2.4e-05  Score=75.56  Aligned_cols=49  Identities=35%  Similarity=0.440  Sum_probs=41.5

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      .++..++.+ +..+|..|++|+|++|.||+++.+|.+.++|||+...++.
T Consensus       112 ~~~~qi~~a-l~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~  160 (288)
T cd07863         112 DLMRQFLRG-LDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYSC  160 (288)
T ss_pred             HHHHHHHHH-HHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccccC
Confidence            455555555 7889999999999999999999999999999999876643

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=97.83  E-value=2.7e-05  Score=74.92  Aligned_cols=75  Identities=15%  Similarity=0.093  Sum_probs=52.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|++|.+.........    ... +.      ..+..++..++.+ +..+|..|++|+|.+|.|++++.+|.+.+.
T Consensus        74 ~e~~~~~~L~~~l~~~~~~~----~~~-~~------~~~~~~~~~i~~a-l~~lH~~~i~H~dikp~nil~~~~~~~~l~  141 (268)
T cd05086          74 FEYCELGDLKSYLSQEQWHR----RNS-QL------LLLQRMACEIAAG-VTHMHKHNFLHSDLALRNCFLTSDLTVKVG  141 (268)
T ss_pred             EecCCCCcHHHHHHhhhccc----ccc-cH------HHHHHHHHHHHHH-HHHHHHCCeeccCCccceEEEcCCccEEec
Confidence            79999999988765321100    000 00      1123444444444 678899999999999999999999999999


Q ss_pred             ecccccc
Q 013370           81 DFGLLCR   87 (444)
Q Consensus        81 DFGmv~~   87 (444)
                      |||....
T Consensus       142 Dfg~~~~  148 (268)
T cd05086         142 DYGIGPS  148 (268)
T ss_pred             ccccccc
Confidence            9998643

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>PTZ00036 glycogen synthase kinase; Provisional

Probab=97.82  E-value=7.2e-05  Score=78.71  Aligned_cols=92  Identities=13%  Similarity=0.070  Sum_probs=57.7

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCC-cEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcC
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG-QIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMD  119 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DG-rLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG  119 (444)
                      .++..++.+ +..||..|++|+|++|.||++++++ .+.++|||+...+.......  .   ......| ...+.+..-.
T Consensus       174 ~~~~qi~~g-L~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~~~--~---~~~t~~y-~aPE~~~~~~  246 (440)
T PTZ00036        174 LYSYQLCRA-LAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSV--S---YICSRFY-RAPELMLGAT  246 (440)
T ss_pred             HHHHHHHHH-HHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccchhccCCCCcc--c---CCCCcCc-cCHHHhcCCC
Confidence            344455544 7889999999999999999999775 69999999998775433211  0   0001112 2244443222


Q ss_pred             CCCCCCChHHHHHHHHHHHh
Q 013370          120 VVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus       120 ~l~~~~d~~~~~~~L~~~l~  139 (444)
                      ......|++.+.--+..++.
T Consensus       247 ~~~~~~DiwSlGvil~ellt  266 (440)
T PTZ00036        247 NYTTHIDLWSLGCIIAEMIL  266 (440)
T ss_pred             CCCcHHHHHHHHHHHHHHHh
Confidence            33445677777666665554

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=97.82  E-value=1.6e-05  Score=75.66  Aligned_cols=78  Identities=17%  Similarity=0.204  Sum_probs=55.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..+.++.......    ....+..+       ...++..++.+ +..||..|++|+|++|.||+++.+|.+.+.
T Consensus        81 ~e~~~~~~L~~~~~~~~~~----~~~~~~~~-------~~~~~~~i~~~-l~~LH~~~i~H~dl~p~nili~~~~~~~l~  148 (267)
T cd08229          81 LELADAGDLSRMIKHFKKQ----KRLIPEKT-------VWKYFVQLCSA-LEHMHSRRVMHRDIKPANVFITATGVVKLG  148 (267)
T ss_pred             EEecCCCCHHHHHHHhhcc----CCCCCHHH-------HHHHHHHHHHH-HHHHHHCCeecCCCCHHHEEEcCCCCEEEC
Confidence            7899999998876531100    00111221       23445555554 678899999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...++.
T Consensus       149 dfg~~~~~~~  158 (267)
T cd08229         149 DLGLGRFFSS  158 (267)
T ss_pred             cchhhhcccc
Confidence            9998876654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=97.82  E-value=3.6e-05  Score=77.66  Aligned_cols=49  Identities=16%  Similarity=0.220  Sum_probs=41.7

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      .++..++.+ +..+|..|++|+|++|.||+++.+|++.+.|||+...+..
T Consensus       177 ~~~~qi~~a-L~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~  225 (337)
T cd05054         177 SYSFQVARG-MEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYK  225 (337)
T ss_pred             HHHHHHHHH-HHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhccc
Confidence            455555555 7888999999999999999999999999999999887754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=97.82  E-value=3e-05  Score=73.41  Aligned_cols=75  Identities=19%  Similarity=0.248  Sum_probs=54.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.+......+.       +..+.       ...++..++.+ +..++..|++|+|++|.|++++.+|.+.++
T Consensus        78 ~e~~~~~~L~~~~~~~~~~-------~~~~~-------~~~~~~~l~~~-l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~  142 (256)
T cd05112          78 FEFMEHGCLSDYLRAQRGK-------FSQET-------LLGMCLDVCEG-MAYLESSNVIHRDLAARNCLVGENQVVKVS  142 (256)
T ss_pred             EEcCCCCcHHHHHHhCccC-------CCHHH-------HHHHHHHHHHH-HHHHHHCCccccccccceEEEcCCCeEEEC
Confidence            6899999988876532210       11111       23444455544 577899999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+..
T Consensus       143 d~g~~~~~~~  152 (256)
T cd05112         143 DFGMTRFVLD  152 (256)
T ss_pred             CCcceeeccc
Confidence            9999876543

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=97.81  E-value=3.2e-05  Score=72.98  Aligned_cols=74  Identities=19%  Similarity=0.196  Sum_probs=54.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.++.+......+ +      .+.       .....++..++++ +..+|..|++|+|++|.||+++.+|++.++
T Consensus        71 ~e~~~~~~l~~~l~~~~~-~------~~~-------~~~~~~~~~~~~~-l~~lH~~~i~h~di~p~nili~~~~~~~l~  135 (251)
T cd05041          71 MELVPGGSLLTFLRKKKN-R------LTV-------KKLLQMSLDAAAG-MEYLESKNCIHRDLAARNCLVGENNVLKIS  135 (251)
T ss_pred             EEcCCCCcHHHHHHhcCC-C------CCH-------HHHHHHHHHHHHH-HHHHHhCCEehhhcCcceEEEcCCCcEEEe
Confidence            689999999887643211 0      111       1123455555544 678899999999999999999999999999


Q ss_pred             ecccccccc
Q 013370           81 DFGLLCRME   89 (444)
Q Consensus        81 DFGmv~~L~   89 (444)
                      |||+.....
T Consensus       136 d~g~~~~~~  144 (251)
T cd05041         136 DFGMSREEE  144 (251)
T ss_pred             ecccccccc
Confidence            999987665

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=97.81  E-value=3.8e-05  Score=74.15  Aligned_cols=75  Identities=25%  Similarity=0.407  Sum_probs=54.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..+.+......+ +      ++.+       ....++..++.+ +..+|..|++|+|++|.|++++.+|++.+.
T Consensus        81 ~e~~~~~~l~~~~~~~~~-~------l~~~-------~~~~~~~qi~~~-L~~LH~~~i~H~dlkp~nili~~~~~~kl~  145 (282)
T cd06643          81 IEFCAGGAVDAVMLELER-P------LTEP-------QIRVVCKQTLEA-LNYLHENKIIHRDLKAGNILFTLDGDIKLA  145 (282)
T ss_pred             EEecCCCcHHHHHHhcCC-C------CCHH-------HHHHHHHHHHHH-HHHHHHCCeeecCCCcccEEEccCCCEEEc
Confidence            689999988776532211 0      1111       123455555554 688999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+......
T Consensus       146 dfg~~~~~~~  155 (282)
T cd06643         146 DFGVSAKNTR  155 (282)
T ss_pred             cccccccccc
Confidence            9998776543

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=97.81  E-value=2.9e-05  Score=76.17  Aligned_cols=74  Identities=22%  Similarity=0.400  Sum_probs=55.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..+.++..-. .        +...       ....++..++.+ +..++..|++|+|++|.||+++.+|.+.+.
T Consensus        96 ~e~~~~~~L~~~~~~~-~--------~~~~-------~~~~i~~ql~~a-L~~LH~~gi~H~dLkp~Nill~~~~~~kl~  158 (296)
T cd06654          96 MEYLAGGSLTDVVTET-C--------MDEG-------QIAAVCRECLQA-LEFLHSNQVIHRDIKSDNILLGMDGSVKLT  158 (296)
T ss_pred             ecccCCCCHHHHHHhc-C--------CCHH-------HHHHHHHHHHHH-HHHHHHCCcccCCCCHHHEEEcCCCCEEEC
Confidence            7999999998876421 0        1111       123455555554 678899999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||....+.+.
T Consensus       159 dfg~~~~~~~~  169 (296)
T cd06654         159 DFGFCAQITPE  169 (296)
T ss_pred             ccccchhcccc
Confidence            99988776554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=97.80  E-value=1.9e-05  Score=79.76  Aligned_cols=48  Identities=29%  Similarity=0.417  Sum_probs=40.4

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccc
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME   89 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~   89 (444)
                      .++..++.+ +..||..|++|+|++|.||+++.+|.+.++|||+.....
T Consensus       127 ~~~~qi~~~-L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~  174 (359)
T cd07876         127 YLLYQMLCG-IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAC  174 (359)
T ss_pred             HHHHHHHHH-HHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccc
Confidence            444454444 788999999999999999999999999999999986543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=97.80  E-value=0.00012  Score=70.29  Aligned_cols=85  Identities=18%  Similarity=0.179  Sum_probs=53.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCC--CCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDG--SSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~--i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLv   78 (444)
                      |||+.|++|.++.........+.  ............ .....++..++.+ +..+|..|++|+|.+|.|++++.+|.+.
T Consensus        75 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~i~~a-l~~lH~~~i~H~dikp~nili~~~~~~k  152 (270)
T cd05047          75 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS-QQLLHFAADVARG-MDYLSQKQFIHRDLAARNILVGENYVAK  152 (270)
T ss_pred             EEeCCCCcHHHHHHhccccccccccccccCCcCCCCH-HHHHHHHHHHHHH-HHHHHHCCEeecccccceEEEcCCCeEE
Confidence            78999999988865321100000  000000000111 1123455555544 6889999999999999999999999999


Q ss_pred             EEecccccc
Q 013370           79 FLDFGLLCR   87 (444)
Q Consensus        79 lLDFGmv~~   87 (444)
                      +.|||....
T Consensus       153 l~dfgl~~~  161 (270)
T cd05047         153 IADFGLSRG  161 (270)
T ss_pred             ECCCCCccc
Confidence            999998653

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.80  E-value=0.00011  Score=77.37  Aligned_cols=74  Identities=26%  Similarity=0.438  Sum_probs=55.9

Q ss_pred             CCCcCCCCcccHHhhc--CCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEE
Q 013370            1 MEWMVGESPTDLISLS--TGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~--~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLv   78 (444)
                      |-|+.|+++.|+....  .|++         +.-      +..+.+..+. .|..||..|.+|+|.++||||++.||.+.
T Consensus       103 mpfMa~GS~ldIik~~~~~Gl~---------E~~------Ia~iLre~Lk-aL~YLH~~G~IHRdvKAgnILi~~dG~Vk  166 (516)
T KOG0582|consen  103 MPFMAGGSLLDIIKTYYPDGLE---------EAS------IATILREVLK-ALDYLHQNGHIHRDVKAGNILIDSDGTVK  166 (516)
T ss_pred             ehhhcCCcHHHHHHHHcccccc---------HHH------HHHHHHHHHH-HHHHHHhcCceecccccccEEEcCCCcEE
Confidence            6789999999998764  3443         111      1122233333 37788999999999999999999999999


Q ss_pred             EEecccccccch
Q 013370           79 FLDFGLLCRMER   90 (444)
Q Consensus        79 lLDFGmv~~L~~   90 (444)
                      +-|||....|-.
T Consensus       167 LadFgvsa~l~~  178 (516)
T KOG0582|consen  167 LADFGVSASLFD  178 (516)
T ss_pred             EcCceeeeeecc
Confidence            999999988754

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=97.80  E-value=3.8e-05  Score=73.12  Aligned_cols=79  Identities=16%  Similarity=0.178  Sum_probs=56.2

Q ss_pred             CCCcCCCCcccHHhhcC-CCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLST-GSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~-G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      |||++|..+.+...... +....   ..+..       ....++..++.+ +..+|..|++|+|.+|.||+++.++++.+
T Consensus        86 ~e~~~~~~l~~~l~~~~~~~~~~---~~~~~-------~~~~~~~~i~~a-L~~lH~~~i~H~dlkp~Nil~~~~~~~kl  154 (273)
T cd05035          86 LPFMKHGDLHSFLLYSRLGGLPE---KLPLQ-------TLLKFMVDIALG-MEYLSNRNFIHRDLAARNCMLREDMTVCV  154 (273)
T ss_pred             EeccCCCCHHHHHHHhhccCCcc---cCCHH-------HHHHHHHHHHHH-HHHHHhCCeeccccchheEEECCCCeEEE
Confidence            68889998887764321 11100   11111       123456666555 68899999999999999999999999999


Q ss_pred             Eecccccccch
Q 013370           80 LDFGLLCRMER   90 (444)
Q Consensus        80 LDFGmv~~L~~   90 (444)
                      .|||....+..
T Consensus       155 ~dfg~~~~~~~  165 (273)
T cd05035         155 ADFGLSKKIYS  165 (273)
T ss_pred             CCccceeeccc
Confidence            99999876644

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=97.79  E-value=3.9e-05  Score=74.60  Aligned_cols=74  Identities=24%  Similarity=0.296  Sum_probs=54.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+ |+.|.++..... .+      ++..       ....++..++++ +..+|..|++|+|++|.||+++.+|.+.+.
T Consensus        81 ~e~~-~~~L~~~i~~~~-~~------~~~~-------~~~~~~~qi~~a-l~~lH~~~i~H~dl~p~nill~~~~~~~l~  144 (298)
T cd07841          81 FEFM-ETDLEKVIKDKS-IV------LTPA-------DIKSYMLMTLRG-LEYLHSNWILHRDLKPNNLLIASDGVLKLA  144 (298)
T ss_pred             Eccc-CCCHHHHHhccC-CC------CCHH-------HHHHHHHHHHHH-HHHHHhCCeeecCCChhhEEEcCCCCEEEc
Confidence            7899 777877764221 00      1111       123556666665 778899999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+..
T Consensus       145 dfg~~~~~~~  154 (298)
T cd07841         145 DFGLARSFGS  154 (298)
T ss_pred             cceeeeeccC
Confidence            9999887654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=97.79  E-value=4.9e-05  Score=73.02  Aligned_cols=50  Identities=22%  Similarity=0.428  Sum_probs=42.4

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      ..++..++.+ +..++..|++|+|++|+||+++++|.+.+.|||....+..
T Consensus       102 ~~~~~~l~~~-l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~  151 (283)
T cd07830         102 RSIIYQILQG-LAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRS  151 (283)
T ss_pred             HHHHHHHHHH-HHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccC
Confidence            3455555555 6788999999999999999999999999999999887755

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=97.78  E-value=9.2e-05  Score=74.08  Aligned_cols=91  Identities=18%  Similarity=0.212  Sum_probs=60.0

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcC
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMD  119 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG  119 (444)
                      ..++..++.+ +..+|..|++|+|++|.||+++.+|.+.+.|||+...++..... +..      ...| ...+.+....
T Consensus       121 ~~i~~qi~~a-L~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~------t~~y-~aPE~~~~~~  191 (343)
T cd07878         121 QFLIYQLLRG-LKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDEMTG-YVA------TRWY-RAPEIMLNWM  191 (343)
T ss_pred             HHHHHHHHHH-HHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecCCCcCC-ccc------cccc-cCchHhcCCc
Confidence            3455666655 67889999999999999999999999999999998877653211 110      1111 1233333323


Q ss_pred             CCCCCCChHHHHHHHHHHHh
Q 013370          120 VVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus       120 ~l~~~~d~~~~~~~L~~~l~  139 (444)
                      ......|++.+.--+..++.
T Consensus       192 ~~~~~~DiwslG~il~el~~  211 (343)
T cd07878         192 HYNQTVDIWSVGCIMAELLK  211 (343)
T ss_pred             cCCchhhhHhHHHHHHHHHH
Confidence            34455777777666655553

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=97.78  E-value=3.7e-05  Score=75.64  Aligned_cols=87  Identities=14%  Similarity=0.189  Sum_probs=57.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCC-c-hhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSS-T-HLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~-~-~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLv   78 (444)
                      |||+.|+.|.++.....+...+.-. . ..++..... .....++..++.+ +..+|..|++|+|++|.||+++++|.+.
T Consensus       103 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~qi~~a-L~~lH~~gi~H~dlkp~Nill~~~~~~k  180 (307)
T cd05098         103 VEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSF-KDLVSCAYQVARG-MEYLASKKCIHRDLAARNVLVTEDNVMK  180 (307)
T ss_pred             EecCCCCcHHHHHHhcCCcccccccccccCccccCCH-HHHHHHHHHHHHH-HHHHHHCCcccccccHHheEEcCCCcEE
Confidence            7999999999887643210000000 0 000111111 1223455555555 7889999999999999999999999999


Q ss_pred             EEecccccccc
Q 013370           79 FLDFGLLCRME   89 (444)
Q Consensus        79 lLDFGmv~~L~   89 (444)
                      +.|||....+.
T Consensus       181 L~dfg~a~~~~  191 (307)
T cd05098         181 IADFGLARDIH  191 (307)
T ss_pred             ECCCccccccc
Confidence            99999877664

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=97.78  E-value=4.2e-05  Score=72.66  Aligned_cols=75  Identities=17%  Similarity=0.178  Sum_probs=53.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||..|+++.+......+.       ....       ....++..++.+ +..+|..|++|+|++|.|++++++|.+.+.
T Consensus        76 ~e~~~~~~L~~~~~~~~~~-------~~~~-------~~~~~~~~i~~~-l~~lH~~~i~H~dlk~~nili~~~~~~kl~  140 (262)
T cd05058          76 LPYMKHGDLRNFIRSETHN-------PTVK-------DLIGFGLQVAKG-MEYLASKKFVHRDLAARNCMLDESFTVKVA  140 (262)
T ss_pred             EecCCCCCHHHHHHhcCCC-------CCHH-------HHHHHHHHHHHH-HHHHHhCCccccccCcceEEEcCCCcEEEC
Confidence            6888888888876432111       0011       122344444444 678899999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+..
T Consensus       141 dfg~~~~~~~  150 (262)
T cd05058         141 DFGLARDIYD  150 (262)
T ss_pred             CccccccccC
Confidence            9999876644

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=97.77  E-value=4.1e-05  Score=74.04  Aligned_cols=88  Identities=15%  Similarity=0.165  Sum_probs=57.4

Q ss_pred             CCCcCCCCcccHHhhcCC-CCCCC--CCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcE
Q 013370            1 MEWMVGESPTDLISLSTG-SSVDG--SSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G-~~~~~--i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrL   77 (444)
                      |||++|++|.++...... ..+..  ..........+. .....++..++.+ +..+|..|++|+|.+|.|+++++++.+
T Consensus        86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~i~~a-l~~lH~~~i~H~dlkp~nili~~~~~~  163 (283)
T cd05090          86 FEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDH-GDFLHIAIQIAAG-MEYLSSHFFVHKDLAARNILIGEQLHV  163 (283)
T ss_pred             EEcCCCCcHHHHHHhcCCCCccccccccccccccccCH-HHHHHHHHHHHHH-HHHHHhcCeehhccccceEEEcCCCcE
Confidence            799999999888754311 00000  000000001111 1223455555554 788999999999999999999999999


Q ss_pred             EEEecccccccch
Q 013370           78 GFLDFGLLCRMER   90 (444)
Q Consensus        78 vlLDFGmv~~L~~   90 (444)
                      .+.|||+...+..
T Consensus       164 kl~dfg~~~~~~~  176 (283)
T cd05090         164 KISDLGLSREIYS  176 (283)
T ss_pred             EeccccccccccC
Confidence            9999999887643

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=97.77  E-value=3.5e-05  Score=73.28  Aligned_cols=75  Identities=29%  Similarity=0.481  Sum_probs=55.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCC-cEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG-QIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DG-rLvl   79 (444)
                      |||++|..|.++.......+        +.       ....++..++.+ +..+|..|++|+|.+|.||+++.+| .+.+
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~--------~~-------~~~~~~~ql~~a-l~~LH~~~i~H~~i~~~nil~~~~~~~~~l  145 (268)
T cd06630          82 VEWMAGGSVSHLLSKYGAFK--------EA-------VIINYTEQLLRG-LSYLHENQIIHRDVKGANLLIDSTGQRLRI  145 (268)
T ss_pred             EeccCCCcHHHHHHHhCCCC--------HH-------HHHHHHHHHHHH-HHHHHhCCeecCCCCHHHEEEcCCCCEEEE
Confidence            68999999998875322111        11       123455555555 6788999999999999999998877 5999


Q ss_pred             Eecccccccchh
Q 013370           80 LDFGLLCRMERK   91 (444)
Q Consensus        80 LDFGmv~~L~~~   91 (444)
                      +|||....++..
T Consensus       146 ~dfg~~~~~~~~  157 (268)
T cd06630         146 ADFGAAARLAAK  157 (268)
T ss_pred             cccccccccccc
Confidence            999998887653

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=97.77  E-value=4e-05  Score=73.64  Aligned_cols=73  Identities=16%  Similarity=0.162  Sum_probs=54.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.+.++.....+       ..+..+       ...++..++.+ +..+|+.|++|+|.+|.|++++.+|.+.+.
T Consensus        85 ~e~~~~~~L~~~l~~~~~-------~l~~~~-------~~~~~~~i~~a-l~~lH~~~iiH~dikp~nili~~~~~~~l~  149 (266)
T cd05064          85 TEYMSNGALDSFLRKHEG-------QLVAGQ-------LMGMLPGLASG-MKYLSEMGYVHKGLAAHKVLVNSDLVCKIS  149 (266)
T ss_pred             EEeCCCCcHHHHHHhCCC-------CCCHHH-------HHHHHHHHHHH-HHHHHHCCEeeccccHhhEEEcCCCcEEEC
Confidence            899999999988754321       011111       23455555544 678999999999999999999999999999


Q ss_pred             eccccccc
Q 013370           81 DFGLLCRM   88 (444)
Q Consensus        81 DFGmv~~L   88 (444)
                      |||.....
T Consensus       150 dfg~~~~~  157 (266)
T cd05064         150 GFRRLQED  157 (266)
T ss_pred             CCcccccc
Confidence            99976554

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=97.76  E-value=4e-05  Score=72.56  Aligned_cols=78  Identities=21%  Similarity=0.338  Sum_probs=57.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..+.+........  .   ..+..       ....++..++.+ +..++..|++|+|++|.||+++++|.+.+.
T Consensus        78 ~e~~~~~~l~~~~~~~~~~--~---~~~~~-------~~~~~~~ql~~a-l~~lh~~~i~h~~l~p~ni~~~~~~~~~l~  144 (267)
T cd06610          78 MPYLSGGSLLDIMKSSYPR--G---GLDEA-------IIATVLKEVLKG-LEYLHSNGQIHRDIKAGNILLGEDGSVKIA  144 (267)
T ss_pred             EeccCCCcHHHHHHHhccc--C---CCCHH-------HHHHHHHHHHHH-HHHHHhCCeecCCCCHHhEEEcCCCCEEEc
Confidence            7899999998887532110  0   01111       123455555555 678899999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...+...
T Consensus       145 df~~~~~~~~~  155 (267)
T cd06610         145 DFGVSASLADG  155 (267)
T ss_pred             ccchHHHhccC
Confidence            99998877654

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=97.76  E-value=3.7e-05  Score=74.54  Aligned_cols=87  Identities=16%  Similarity=0.208  Sum_probs=57.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCch---hhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTH---LDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~---~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrL   77 (444)
                      |||+.|.+|.++........ ......   ......+. .....++..++.+ +..+|..|++|+|.+|.||+++.+|.+
T Consensus        95 ~e~~~~~~L~~~l~~~~~~~-~~~~~~~~~~~~~~l~~-~~~~~i~~qi~~a-l~~LH~~~ivH~dlkp~Nil~~~~~~~  171 (293)
T cd05053          95 VEYAAHGNLRDFLRARRPPG-EYASPDDPRPPEETLTQ-KDLVSFAYQVARG-MEFLASKKCIHRDLAARNVLVTEDHVM  171 (293)
T ss_pred             EEeCCCCcHHHHHHhcCCCc-cccccccccccccccCH-HHHHHHHHHHHHH-HHHHHHCCccccccceeeEEEcCCCeE
Confidence            78999999988875421000 000000   00011111 1233566666655 688899999999999999999999999


Q ss_pred             EEEecccccccch
Q 013370           78 GFLDFGLLCRMER   90 (444)
Q Consensus        78 vlLDFGmv~~L~~   90 (444)
                      .+.|||....+..
T Consensus       172 kL~Dfg~~~~~~~  184 (293)
T cd05053         172 KIADFGLARDIHH  184 (293)
T ss_pred             EeCcccccccccc
Confidence            9999999876654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>PHA03212 serine/threonine kinase US3; Provisional

Probab=97.76  E-value=4.9e-05  Score=78.73  Aligned_cols=48  Identities=27%  Similarity=0.396  Sum_probs=40.6

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEeccccccc
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM   88 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L   88 (444)
                      ..++..++.+ +..+|..|++|+|++|.||+++.+|.+.++|||+....
T Consensus       185 ~~i~~qi~~a-L~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~  232 (391)
T PHA03212        185 LAIERSVLRA-IQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFP  232 (391)
T ss_pred             HHHHHHHHHH-HHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCccccc
Confidence            3455555555 78899999999999999999999999999999997543

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=97.76  E-value=0.00011  Score=70.55  Aligned_cols=80  Identities=11%  Similarity=0.070  Sum_probs=55.1

Q ss_pred             CCCcCCCCcccHHhhcCC-CCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLSTG-SSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G-~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      |||++|+.|.++.....+ .+...-..++..+       ...++..++.+ +..+|..|++|+|++|.|++++.+|.+.+
T Consensus        87 ~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~-------~~~~~~~l~~~-l~~LH~~~i~H~dlkp~Nili~~~~~~~l  158 (275)
T cd05046          87 LEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQ-------KVALCTQIALG-MDHLSNARFVHRDLAARNCLVSSQREVKV  158 (275)
T ss_pred             EEecCCCcHHHHHHhcccccccccccCCCHHH-------HHHHHHHHHHH-HHHhhhcCcccCcCccceEEEeCCCcEEE
Confidence            799999999988764321 1000000111222       22445555554 68899999999999999999999999999


Q ss_pred             Eeccccccc
Q 013370           80 LDFGLLCRM   88 (444)
Q Consensus        80 LDFGmv~~L   88 (444)
                      .|||.....
T Consensus       159 ~~~~~~~~~  167 (275)
T cd05046         159 SLLSLSKDV  167 (275)
T ss_pred             ccccccccc
Confidence            999987644

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=97.75  E-value=4.5e-05  Score=74.15  Aligned_cols=50  Identities=18%  Similarity=0.236  Sum_probs=42.0

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      ..++..++.+ +..||..|++|+|++|.||+++.++.+.+.|||+...+..
T Consensus       130 ~~i~~~i~~~-l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~  179 (290)
T cd05045         130 ISFAWQISRG-MQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYE  179 (290)
T ss_pred             HHHHHHHHHH-HHHHHHCCeehhhhhhheEEEcCCCcEEeccccccccccC
Confidence            4555555555 6889999999999999999999999999999999876543

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=97.75  E-value=4.6e-05  Score=82.70  Aligned_cols=90  Identities=18%  Similarity=0.291  Sum_probs=68.2

Q ss_pred             HHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCC--cEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHH
Q 013370           39 LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG--QIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLT  116 (444)
Q Consensus        39 l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DG--rLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~  116 (444)
                      +..+++.++.+ |..|++.|++|||++|.|||+..-+  +|.+||||..+..++..- .++.       -.+.+..|++.
T Consensus       291 ir~~~~Qil~~-L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vy-tYiQ-------SRfYRAPEVIL  361 (586)
T KOG0667|consen  291 VRKFAQQILTA-LLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVY-TYIQ-------SRFYRAPEVIL  361 (586)
T ss_pred             HHHHHHHHHHH-HHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCcce-eeee-------ccccccchhhc
Confidence            34677777777 8889999999999999999997543  899999999999887654 4443       44667789998


Q ss_pred             hcCCCCCCCChHHHHHHHHHHH
Q 013370          117 EMDVVRPGTNTLRVTMDLEDAL  138 (444)
Q Consensus       117 ~lG~l~~~~d~~~~~~~L~~~l  138 (444)
                      .+.+- ...|+|.|.=-+++++
T Consensus       362 GlpY~-~~IDmWSLGCIlAEL~  382 (586)
T KOG0667|consen  362 GLPYD-TAIDMWSLGCILAELF  382 (586)
T ss_pred             cCCCC-CccceeehhhhHHhHh
Confidence            76554 4589997754444444

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=97.75  E-value=2.6e-05  Score=75.32  Aligned_cols=74  Identities=22%  Similarity=0.392  Sum_probs=54.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.+.+...-  +.       .+..       ....++..++.+ +..++..|++|+|++|+|++++.+|.+.+.
T Consensus        81 ~e~~~~~~l~~~i~~--~~-------~~~~-------~~~~~~~~l~~~-l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~  143 (277)
T cd06641          81 MEYLGGGSALDLLEP--GP-------LDET-------QIATILREILKG-LDYLHSEKKIHRDIKAANVLLSEHGEVKLA  143 (277)
T ss_pred             EEeCCCCcHHHHHhc--CC-------CCHH-------HHHHHHHHHHHH-HHHHccCCeecCCCCHHhEEECCCCCEEEe
Confidence            789999988876531  10       1111       123455555555 577899999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...++..
T Consensus       144 dfg~~~~~~~~  154 (277)
T cd06641         144 DFGVAGQLTDT  154 (277)
T ss_pred             ecccceecccc
Confidence            99998776553

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.75  E-value=6.4e-05  Score=75.14  Aligned_cols=86  Identities=23%  Similarity=0.296  Sum_probs=63.0

Q ss_pred             HHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHH
Q 013370           51 LVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRV  130 (444)
Q Consensus        51 L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~  130 (444)
                      ++.++..|+.|+|.+|||++|+.+--+.++|||+...-+++++..+..-++    ..|.+..+.+...--.....|++.+
T Consensus       169 LKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hMTqEVV----TQYYRAPEiLMGaRhYs~AvDiWSV  244 (449)
T KOG0664|consen  169 LKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMTHEVV----TQYYRAPELLMGARRYTGAVDIWSV  244 (449)
T ss_pred             hHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhhhhhHHHHH----HHHhccHHHhhcchhhcCccceehh
Confidence            566778899999999999999999999999999999988888887765443    2344556666433334556777765


Q ss_pred             HHHHHHHHhc
Q 013370          131 TMDLEDALGE  140 (444)
Q Consensus       131 ~~~L~~~l~~  140 (444)
                      .=-+.++++.
T Consensus       245 GCIFaELLgR  254 (449)
T KOG0664|consen  245 GCIFAELLQR  254 (449)
T ss_pred             hHHHHHHHhh
Confidence            5444444443

>PHA02882 putative serine/threonine kinase; Provisional

Probab=97.75  E-value=3.7e-05  Score=75.53  Aligned_cols=50  Identities=20%  Similarity=0.343  Sum_probs=42.3

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      ..++..++.+ +..+|..|++|+|++|.||++++++.+.++|||+...+..
T Consensus       129 ~~i~~qi~~~-l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~  178 (294)
T PHA02882        129 KNIMKDMLTT-LEYIHEHGISHGDIKPENIMVDGNNRGYIIDYGIASHFII  178 (294)
T ss_pred             HHHHHHHHHH-HHHHHhCCeecCCCCHHHEEEcCCCcEEEEEcCCceeecc
Confidence            3455555555 7889999999999999999999999999999999887643

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=97.74  E-value=4.5e-05  Score=73.20  Aligned_cols=75  Identities=21%  Similarity=0.398  Sum_probs=56.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.+|.++.... .        .+...       ...++..++.+ +..++..|++|+|++|.||+++.+|.+.+.
T Consensus        81 ~e~~~~~~L~~~~~~~-~--------l~~~~-------~~~i~~~i~~~-l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~  143 (277)
T cd06917          81 MEYAEGGSVRTLMKAG-P--------IAEKY-------ISVIIREVLVA-LKYIHKVGVIHRDIKAANILVTNTGNVKLC  143 (277)
T ss_pred             EecCCCCcHHHHHHcc-C--------CCHHH-------HHHHHHHHHHH-HHHHHhCCcccCCcCHHHEEEcCCCCEEEc
Confidence            7999999998876421 1        11111       22445555544 678999999999999999999999999999


Q ss_pred             ecccccccchhh
Q 013370           81 DFGLLCRMERKH   92 (444)
Q Consensus        81 DFGmv~~L~~~~   92 (444)
                      |||....+....
T Consensus       144 dfg~~~~~~~~~  155 (277)
T cd06917         144 DFGVAALLNQNS  155 (277)
T ss_pred             cCCceeecCCCc
Confidence            999988776543

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=97.74  E-value=5.4e-05  Score=77.55  Aligned_cols=51  Identities=20%  Similarity=0.257  Sum_probs=42.4

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchh
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~   91 (444)
                      ..++..++.+ +..+|..|++|+|++|.||+++.++.+.+.|||+...+...
T Consensus       217 ~~~~~qi~~~-l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~  267 (375)
T cd05104         217 LSFSYQVAKG-MSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRND  267 (375)
T ss_pred             HHHHHHHHHH-HHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCc
Confidence            3455555554 78889999999999999999999999999999998876543

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=97.74  E-value=4.5e-05  Score=74.01  Aligned_cols=47  Identities=28%  Similarity=0.359  Sum_probs=39.7

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEeccccccc
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM   88 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L   88 (444)
                      .++..++.+ +..+|..|++|+|.+|.||+++.+|++.+.|||+....
T Consensus       107 ~~~~qi~~~-L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~  153 (291)
T cd07870         107 LFMFQLLRG-LAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAK  153 (291)
T ss_pred             HHHHHHHHH-HHHHHhCCcccCCCChHHEEEcCCCcEEEecccccccc
Confidence            345555554 68889999999999999999999999999999987654

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=97.74  E-value=3.8e-05  Score=74.39  Aligned_cols=87  Identities=16%  Similarity=0.110  Sum_probs=56.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCc-------hhh-HhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEc
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSST-------HLD-RQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYT   72 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~-------~~~-~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~   72 (444)
                      |||++|..|.+......+........       ... ...... .....++..++.+ +..+|..|++|+|.+|.|++++
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~i~~a-L~~lH~~~i~H~dl~p~nil~~  164 (288)
T cd05050          87 FEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSC-TEQLCIAKQVAAG-MAYLSERKFVHRDLATRNCLVG  164 (288)
T ss_pred             EecCCCCCHHHHHHHcCccccccccccccccccccccccccCH-HHHHHHHHHHHHH-HHHHHhCCeecccccHhheEec
Confidence            68999999988876422110000000       000 000111 1223556666665 6788999999999999999999


Q ss_pred             cCCcEEEEecccccccc
Q 013370           73 SSGQIGFLDFGLLCRME   89 (444)
Q Consensus        73 ~DGrLvlLDFGmv~~L~   89 (444)
                      .+|.+.+.|||....+.
T Consensus       165 ~~~~~~l~dfg~~~~~~  181 (288)
T cd05050         165 ENMVVKIADFGLSRNIY  181 (288)
T ss_pred             CCCceEECccccceecc
Confidence            99999999999876553

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=97.73  E-value=0.00022  Score=69.18  Aligned_cols=73  Identities=15%  Similarity=0.122  Sum_probs=51.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCC-----
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG-----   75 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DG-----   75 (444)
                      |||++|+.+.+......+.       .+...       ...++..++.+ +..+|..|++|+|++|.||+++++|     
T Consensus        95 ~ey~~~g~L~~~l~~~~~~-------~~~~~-------~~~i~~qi~~~-l~~lH~~~iiH~dlkp~Nill~~~~~~~~~  159 (274)
T cd05076          95 EEFVEHGPLDVCLRKEKGR-------VPVAW-------KITVAQQLASA-LSYLEDKNLVHGNVCAKNILLARLGLAEGT  159 (274)
T ss_pred             EecCCCCcHHHHHHhcCCC-------CCHHH-------HHHHHHHHHHH-HHHHHcCCccCCCCCcccEEEeccCcccCc
Confidence            7999999998876532221       11121       22455555555 6888999999999999999998654     


Q ss_pred             --cEEEEeccccccc
Q 013370           76 --QIGFLDFGLLCRM   88 (444)
Q Consensus        76 --rLvlLDFGmv~~L   88 (444)
                        .+.+.|||.....
T Consensus       160 ~~~~kl~d~g~~~~~  174 (274)
T cd05076         160 SPFIKLSDPGVSFTA  174 (274)
T ss_pred             cceeeecCCcccccc
Confidence              4889999986543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=97.73  E-value=3.5e-05  Score=77.95  Aligned_cols=49  Identities=29%  Similarity=0.422  Sum_probs=41.6

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      .++..++.+ +..+|..|++|+|++|.||+++.+|.+.++|||+......
T Consensus       130 ~~~~qi~~a-L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~  178 (364)
T cd07875         130 YLLYQMLCG-IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT  178 (364)
T ss_pred             HHHHHHHHH-HHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCC
Confidence            455555544 7889999999999999999999999999999999876544

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=97.73  E-value=3.7e-05  Score=73.67  Aligned_cols=76  Identities=20%  Similarity=0.134  Sum_probs=56.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.+.+...... .      .++..       ....++..++.+ +..+|..|++|+|++|.|++++.+|.+.+.
T Consensus        85 ~e~~~~~~L~~~l~~~~-~------~~~~~-------~~~~~~~~l~~~-l~~lH~~~~~H~dl~p~nili~~~~~~~l~  149 (270)
T cd05056          85 MELAPLGELRSYLQVNK-Y------SLDLA-------SLILYSYQLSTA-LAYLESKRFVHRDIAARNVLVSSPDCVKLG  149 (270)
T ss_pred             EEcCCCCcHHHHHHhCC-C------CCCHH-------HHHHHHHHHHHH-HHHHHhCCeeccccChheEEEecCCCeEEc
Confidence            78999999988875321 0      01111       123455566665 678899999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||....+...
T Consensus       150 d~g~~~~~~~~  160 (270)
T cd05056         150 DFGLSRYLEDE  160 (270)
T ss_pred             cCceeeecccc
Confidence            99998766543

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=97.73  E-value=6.7e-05  Score=75.52  Aligned_cols=48  Identities=17%  Similarity=0.186  Sum_probs=40.5

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccc
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME   89 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~   89 (444)
                      .++..++.+ +..+|..|++|+|++|.||+++.+|.+.++|||+...+.
T Consensus       183 ~~~~qi~~a-l~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~  230 (343)
T cd05103         183 CYSFQVAKG-MEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIY  230 (343)
T ss_pred             HHHHHHHHH-HHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccc
Confidence            345555554 678899999999999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=97.72  E-value=5.1e-05  Score=74.83  Aligned_cols=76  Identities=17%  Similarity=0.172  Sum_probs=55.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+.|+.|.+......+.      .++..       ....++..++.+ +..+|..|++|+|.+|.||+++.++.+.+.
T Consensus       118 ~e~~~~~~L~~~i~~~~~~------~l~~~-------~~~~i~~~i~~~-l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~  183 (302)
T cd05055         118 TEYCCYGDLLNFLRRKRES------FLTLE-------DLLSFSYQVAKG-MAFLASKNCIHRDLAARNVLLTHGKIVKIC  183 (302)
T ss_pred             EEcCCCCcHHHHHHhCCCC------CCCHH-------HHHHHHHHHHHH-HHHHHHCCeehhhhccceEEEcCCCeEEEC
Confidence            7899999998876532210      01111       123455555544 688999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+..
T Consensus       184 dfg~~~~~~~  193 (302)
T cd05055         184 DFGLARDIMN  193 (302)
T ss_pred             CCcccccccC
Confidence            9999876654

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=97.72  E-value=3e-05  Score=80.75  Aligned_cols=106  Identities=18%  Similarity=0.177  Sum_probs=70.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccC---CcE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS---GQI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~D---GrL   77 (444)
                      ||||+|+.|-|.....+-+            +.+.+   +.+..+++.+ ++.||+.|+.|+|++|.|||+..|   =.|
T Consensus       255 lE~v~GGeLfd~vv~nk~l------------~ed~~---K~~f~Qll~a-vkYLH~~GI~HRDiKPeNILl~~~~e~~ll  318 (475)
T KOG0615|consen  255 LEYVEGGELFDKVVANKYL------------REDLG---KLLFKQLLTA-VKYLHSQGIIHRDIKPENILLSNDAEDCLL  318 (475)
T ss_pred             EEEecCccHHHHHHhcccc------------ccchh---HHHHHHHHHH-HHHHHHcCcccccCCcceEEeccCCcceEE
Confidence            7999999999987654211            11222   3456666666 788999999999999999999876   478


Q ss_pred             EEEecccccccchh-hHHhHHHHHHHHHhCCHHHH-HHHHHhcCCCC--CCCChHHH
Q 013370           78 GFLDFGLLCRMERK-HQFAMLASIVHIVNGDWQSL-VHSLTEMDVVR--PGTNTLRV  130 (444)
Q Consensus        78 vlLDFGmv~~L~~~-~R~~l~~ll~alv~~D~~~l-a~~l~~lG~l~--~~~d~~~~  130 (444)
                      .+-|||+.+...+. +.+++|.        ...-+ .+.+..-|.-.  .-+|.+.+
T Consensus       319 KItDFGlAK~~g~~sfm~TlCG--------TpsYvAPEVl~~kg~~~~~~kVDiWSl  367 (475)
T KOG0615|consen  319 KITDFGLAKVSGEGSFMKTLCG--------TPSYVAPEVLASKGVEYYPSKVDIWSL  367 (475)
T ss_pred             EecccchhhccccceehhhhcC--------CccccChhheecCCeecccchheeeec
Confidence            89999999887543 3344443        33222 45565555432  23455543

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=97.72  E-value=7.7e-05  Score=70.14  Aligned_cols=79  Identities=18%  Similarity=0.196  Sum_probs=55.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.++.+.........    ..+++       .....++..++.+ +..++..|++|+|++|.|++++.++++.+.
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~----~~~~~-------~~~~~~~~~l~~a-l~~lh~~~i~h~~l~~~ni~~~~~~~~kl~  145 (256)
T cd08530          78 MEYAPFGDLSKAISKRKKKR----KLIPE-------QEIWRIFIQLLRG-LQALHEQKILHRDLKSANILLVANDLVKIG  145 (256)
T ss_pred             ehhcCCCCHHHHHHHHHhhc----CCCCH-------HHHHHHHHHHHHH-HHHHhhCCcccCCCCcceEEEecCCcEEEe
Confidence            68899998888764321000    00111       1123455555555 578899999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...++..
T Consensus       146 d~g~~~~~~~~  156 (256)
T cd08530         146 DLGISKVLKKN  156 (256)
T ss_pred             eccchhhhccC
Confidence            99998776554

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=97.71  E-value=3.7e-05  Score=74.05  Aligned_cols=49  Identities=24%  Similarity=0.382  Sum_probs=41.8

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      .++..++++ +..+|..|++|+|.+|+||+++.+|++.+.|||+...+..
T Consensus       103 ~~~~qi~~a-l~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~  151 (284)
T cd07839         103 SFMFQLLKG-LAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGI  151 (284)
T ss_pred             HHHHHHHHH-HHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCC
Confidence            455566665 7889999999999999999999999999999999876543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=97.71  E-value=6.4e-05  Score=72.56  Aligned_cols=80  Identities=20%  Similarity=0.219  Sum_probs=54.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCC---cE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG---QI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DG---rL   77 (444)
                      |||++|+.|.++........ +....++..+       ...++..++.+ +..+|..|++|+|++|.||+++.+|   .+
T Consensus        88 ~e~~~g~~L~~~i~~~~~~~-~~~~~~~~~~-------~~~~~~qi~~~-l~~LH~~~ivH~dlkp~nil~~~~~~~~~~  158 (277)
T cd05036          88 LELMAGGDLKSFLRENRPRP-ERPSSLTMKD-------LLFCARDVAKG-CKYLEENHFIHRDIAARNCLLTCKGPGRVA  158 (277)
T ss_pred             EecCCCCCHHHHHHHhCCCC-CCCCCCCHHH-------HHHHHHHHHHH-HHHHHHCCEeecccchheEEEeccCCCcce
Confidence            79999999998875432110 1111111111       22445555554 6788999999999999999998765   58


Q ss_pred             EEEecccccccc
Q 013370           78 GFLDFGLLCRME   89 (444)
Q Consensus        78 vlLDFGmv~~L~   89 (444)
                      .++|||+...+.
T Consensus       159 kl~dfg~~~~~~  170 (277)
T cd05036         159 KIADFGMARDIY  170 (277)
T ss_pred             EeccCccccccC
Confidence            999999988764

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=97.71  E-value=0.00012  Score=72.80  Aligned_cols=83  Identities=25%  Similarity=0.288  Sum_probs=60.7

Q ss_pred             HHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHH
Q 013370           51 LVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRV  130 (444)
Q Consensus        51 L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~  130 (444)
                      +..+|..++.|+|++|.|+++++||.+.+-|||+.+-+....+..--.     +--.|.+..|.+...--...++|++++
T Consensus       114 l~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~-----V~TRWYRAPELLfGsr~Yg~~VDmWav  188 (318)
T KOG0659|consen  114 LAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTHQ-----VVTRWYRAPELLFGSRQYGTGVDMWAV  188 (318)
T ss_pred             HHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcccccc-----eeeeeccChHHhccchhcCCcchhhhH
Confidence            556788999999999999999999999999999999888766544322     334466667777544445566787765


Q ss_pred             HHHHHHHH
Q 013370          131 TMDLEDAL  138 (444)
Q Consensus       131 ~~~L~~~l  138 (444)
                      .=-+++++
T Consensus       189 GCI~AELl  196 (318)
T KOG0659|consen  189 GCIFAELL  196 (318)
T ss_pred             HHHHHHHH
Confidence            44444444

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=97.71  E-value=4.1e-05  Score=74.96  Aligned_cols=48  Identities=25%  Similarity=0.333  Sum_probs=40.3

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccc
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME   89 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~   89 (444)
                      .++..++.+ +..++..|++|+|++|+||+++.+|.+.++|||+.....
T Consensus       108 ~~~~qi~~a-L~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~  155 (301)
T cd07873         108 LFLFQLLRG-LNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKS  155 (301)
T ss_pred             HHHHHHHHH-HHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccC
Confidence            344455554 788899999999999999999999999999999987654

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=97.71  E-value=5.2e-05  Score=77.07  Aligned_cols=49  Identities=35%  Similarity=0.430  Sum_probs=41.6

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      .++..++.+ +..+|..|++|+|++|.||+++.+|.+.++|||+....+.
T Consensus       107 ~~~~qi~~a-L~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~  155 (372)
T cd07853         107 VFLYQILRG-LKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEP  155 (372)
T ss_pred             HHHHHHHHH-HHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeeccc
Confidence            455555554 7889999999999999999999999999999998876543

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=97.71  E-value=6.8e-05  Score=72.20  Aligned_cols=74  Identities=22%  Similarity=0.367  Sum_probs=55.4

Q ss_pred             CCCcCCCCcccHHhhcC-CCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLST-GSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~-G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      |||++|..+.++..... .++        ..       ....++..++.+ +..++..|++|+|++|.|++++.+|++.+
T Consensus        81 ~e~~~~~~L~~~~~~~~~~l~--------~~-------~~~~~~~ql~~~-l~~lh~~~i~h~dl~p~nili~~~~~~~l  144 (280)
T cd06611          81 IEFCDGGALDSIMLELERGLT--------EP-------QIRYVCRQMLEA-LNFLHSHKVIHRDLKAGNILLTLDGDVKL  144 (280)
T ss_pred             eeccCCCcHHHHHHHhcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCcccCCCChhhEEECCCCCEEE
Confidence            79999999988765321 111        11       123455555555 67889999999999999999999999999


Q ss_pred             Eecccccccch
Q 013370           80 LDFGLLCRMER   90 (444)
Q Consensus        80 LDFGmv~~L~~   90 (444)
                      .|||.......
T Consensus       145 ~d~g~~~~~~~  155 (280)
T cd06611         145 ADFGVSAKNKS  155 (280)
T ss_pred             ccCccchhhcc
Confidence            99998766543

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=97.70  E-value=5e-05  Score=75.76  Aligned_cols=49  Identities=24%  Similarity=0.413  Sum_probs=42.2

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      .++..++.+ +..+|..|++|+|++|+||+++.+|.+.++|||....++.
T Consensus       109 ~~~~qi~~a-L~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~  157 (332)
T cd07857         109 SFIYQILCG-LKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSE  157 (332)
T ss_pred             HHHHHHHHH-HHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceeccc
Confidence            455555555 7889999999999999999999999999999999887764

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=97.68  E-value=8.5e-05  Score=73.62  Aligned_cols=49  Identities=24%  Similarity=0.430  Sum_probs=40.8

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      .++..++.+ +..+|..|++|+|++|+||+++.+|.+.+.|||++...+.
T Consensus       129 ~i~~~i~~~-l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~  177 (317)
T cd06635         129 AITHGALQG-LAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP  177 (317)
T ss_pred             HHHHHHHHH-HHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCC
Confidence            344444444 6888999999999999999999999999999999876654

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=97.68  E-value=4.8e-05  Score=72.87  Aligned_cols=84  Identities=12%  Similarity=0.144  Sum_probs=55.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|++|.+......+.. +..   ........ .....++..++.+ +..+|..|++|+|.+|.|++++.+|.+.+.
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~-~~~---~~~~~~~~-~~~~~~~~~i~~~-l~~lH~~~i~H~di~p~nill~~~~~~kl~  161 (277)
T cd05032          88 MELMAKGDLKSYLRSRRPEA-ENN---PGLGPPTL-QKFIQMAAEIADG-MAYLAAKKFVHRDLAARNCMVAEDLTVKIG  161 (277)
T ss_pred             EecCCCCCHHHHHHhcccch-hhc---cCCCCCCH-HHHHHHHHHHHHH-HHHHHhCCccccccChheEEEcCCCCEEEC
Confidence            79999999998875432110 000   00000011 1123445555554 678899999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+..
T Consensus       162 dfg~~~~~~~  171 (277)
T cd05032         162 DFGMTRDIYE  171 (277)
T ss_pred             Ccccchhhcc
Confidence            9999876644

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=97.68  E-value=5.1e-05  Score=76.48  Aligned_cols=50  Identities=28%  Similarity=0.414  Sum_probs=42.4

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchh
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~   91 (444)
                      .++..++.+ +..++..|++|+|++|.||+++.+|.+.+.|||+...+...
T Consensus       122 ~~~~ql~~a-L~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~  171 (353)
T cd07850         122 YLLYQMLCG-IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS  171 (353)
T ss_pred             HHHHHHHHH-HHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCC
Confidence            455555544 78999999999999999999999999999999999877553

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=97.68  E-value=5.6e-05  Score=86.54  Aligned_cols=83  Identities=20%  Similarity=0.261  Sum_probs=56.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.++.......  +...+ ....+... .....++..++.+ +..+|..|++|+|++|.||+++.+|++.++
T Consensus        81 MEY~eGGSL~~lL~s~~~~--~~l~e-~~~~~lsv-~~iL~I~~QIa~A-L~yLHs~GIIHRDLKPeNILLd~dg~vKLi  155 (932)
T PRK13184         81 MPYIEGYTLKSLLKSVWQK--ESLSK-ELAEKTSV-GAFLSIFHKICAT-IEYVHSKGVLHRDLKPDNILLGLFGEVVIL  155 (932)
T ss_pred             EEcCCCCCHHHHHHHhhhc--cccch-hhhcccCH-HHHHHHHHHHHHH-HHHHHHCCccccCCchheEEEcCCCCEEEE
Confidence            8999999999887532100  00000 00001111 1123455555544 788999999999999999999999999999


Q ss_pred             eccccccc
Q 013370           81 DFGLLCRM   88 (444)
Q Consensus        81 DFGmv~~L   88 (444)
                      |||....+
T Consensus       156 DFGLAk~i  163 (932)
T PRK13184        156 DWGAAIFK  163 (932)
T ss_pred             ecCcceec
Confidence            99999876

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=97.68  E-value=5.3e-05  Score=72.72  Aligned_cols=74  Identities=23%  Similarity=0.316  Sum_probs=56.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..+.+..... .        ++.       .....++..++.+ +..++..|++|+|++|.|++++.+|.+.+.
T Consensus        78 ~e~~~~~~L~~~~~~~-~--------~~~-------~~~~~~~~ql~~~-l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~  140 (274)
T cd06609          78 MEYCGGGSCLDLLKPG-K--------LDE-------TYIAFILREVLLG-LEYLHEEGKIHRDIKAANILLSEEGDVKLA  140 (274)
T ss_pred             EEeeCCCcHHHHHhhc-C--------CCH-------HHHHHHHHHHHHH-HHHHHhCCcccCCCCHHHEEECCCCCEEEc
Confidence            5889999888776431 1        111       1233556666655 567899999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||....++..
T Consensus       141 d~g~~~~~~~~  151 (274)
T cd06609         141 DFGVSGQLTST  151 (274)
T ss_pred             ccccceeeccc
Confidence            99999888754

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=97.68  E-value=7.6e-05  Score=73.05  Aligned_cols=85  Identities=20%  Similarity=0.194  Sum_probs=54.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCC--CchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGS--STHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i--~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLv   78 (444)
                      |||++|+.|.+........+....  ........... .....++..++.+ +..+|..|++|+|.+|.|++++.++.+.
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~i~~qi~~a-l~~lH~~~ivH~dlkp~Nill~~~~~~k  159 (297)
T cd05089          82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTS-QQLLQFASDVATG-MQYLSEKQFIHRDLAARNVLVGENLASK  159 (297)
T ss_pred             EEecCCCcHHHHHHhccccccccccccccCccCCCCH-HHHHHHHHHHHHH-HHHHHHCCcccCcCCcceEEECCCCeEE
Confidence            688999999888753211100000  00000000111 1123455555555 7889999999999999999999999999


Q ss_pred             EEecccccc
Q 013370           79 FLDFGLLCR   87 (444)
Q Consensus        79 lLDFGmv~~   87 (444)
                      +.|||+...
T Consensus       160 l~dfg~~~~  168 (297)
T cd05089         160 IADFGLSRG  168 (297)
T ss_pred             ECCcCCCcc
Confidence            999998754

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=97.68  E-value=0.00025  Score=67.91  Aligned_cols=92  Identities=17%  Similarity=0.252  Sum_probs=58.3

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcC
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMD  119 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG  119 (444)
                      ..++..++.+ ++.+|..|++|+|++|.||+++. |.+.+.|||....+.......-  .    ....+....+.+..-+
T Consensus       103 ~~~~~qi~~~-L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~~--~----~~~~~y~aPE~~~~~~  174 (282)
T cd07831         103 KSYMYQLLKS-LDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYTE--Y----ISTRWYRAPECLLTDG  174 (282)
T ss_pred             HHHHHHHHHH-HHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccCCCcCC--C----CCCcccCChhHhhcCC
Confidence            3455555555 78899999999999999999999 9999999999887643321110  0    0000111133333334


Q ss_pred             CCCCCCChHHHHHHHHHHHh
Q 013370          120 VVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus       120 ~l~~~~d~~~~~~~L~~~l~  139 (444)
                      ......|+..+.--+..++.
T Consensus       175 ~~~~~~Di~slGv~l~el~~  194 (282)
T cd07831         175 YYGPKMDIWAVGCVFFEILS  194 (282)
T ss_pred             CCCcchhHHHHHHHHHHHHc
Confidence            44556777777655555553

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=97.68  E-value=7.6e-05  Score=73.41  Aligned_cols=49  Identities=22%  Similarity=0.388  Sum_probs=41.3

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      .++..++.+ +..++..|++|+|++|+||+++.+|.+.+.|||+....++
T Consensus       119 ~~~~ql~~~-L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~  167 (307)
T cd06607         119 AICHGALQG-LAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSP  167 (307)
T ss_pred             HHHHHHHHH-HHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCC
Confidence            445555544 7889999999999999999999999999999999876654

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=97.67  E-value=5.5e-05  Score=75.33  Aligned_cols=48  Identities=27%  Similarity=0.311  Sum_probs=41.9

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccc
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME   89 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~   89 (444)
                      .++..++.+ ++.++..|++|+|++|+||+++.+|.+.+.|||+...+.
T Consensus       123 ~~~~ql~~a-L~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~  170 (335)
T PTZ00024        123 CILLQILNG-LNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRYG  170 (335)
T ss_pred             HHHHHHHHH-HHHHHhCCeecccccHHHeEECCCCCEEECCccceeecc
Confidence            456666655 788999999999999999999999999999999988765

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=97.67  E-value=9.5e-05  Score=79.78  Aligned_cols=176  Identities=21%  Similarity=0.275  Sum_probs=109.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      .||+.| .|..++......+        +++       ..+++..+|.+ +..|+..++.|+|.+|-||++..+|.+.++
T Consensus        80 te~a~g-~L~~il~~d~~lp--------Ee~-------v~~~a~~LVsa-L~yLhs~rilhrd~kPqniLl~~~~~~Klc  142 (808)
T KOG0597|consen   80 TEYAVG-DLFTILEQDGKLP--------EEQ-------VRAIAYDLVSA-LYYLHSNRILHRDMKPQNILLEKGGTLKLC  142 (808)
T ss_pred             ehhhhh-hHHHHHHhccCCC--------HHH-------HHHHHHHHHHH-HHHHHhcCcccccCCcceeeecCCCceeec
Confidence            378888 7777666433222        222       33567777766 899999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHhchhccCCCCcccHHHHHHHHH
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIW  160 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~~~~~~~~l~~~~f~~ll~~l~  160 (444)
                      |||+.+.++....      +..=+.+.+--++-.+++=+-.+-..|.+.+.=-+++.+..   ..+.    +.+-+.++.
T Consensus       143 dFg~Ar~m~~~t~------vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G---~PPF----~a~si~~Lv  209 (808)
T KOG0597|consen  143 DFGLARAMSTNTS------VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVG---QPPF----YARSITQLV  209 (808)
T ss_pred             hhhhhhhcccCce------eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcC---CCCc----hHHHHHHHH
Confidence            9999998877421      11223344444555555545555667888765555554322   1121    223334455


Q ss_pred             HHHHhCCcCCChHHHHHHHHHHHHHHHhhhcCCCCC--hHHhHH-HHHHHHh
Q 013370          161 SIALKYHFRMPPYYTLVLRSLASLEGLAIAGDPHFK--TFEAAY-PFVIQKL  209 (444)
Q Consensus       161 ~l~~~~~~~vP~~~~li~Ral~~LEGla~~LDP~fd--i~~~a~-Pyv~r~L  209 (444)
                      +...+.+.+.|+....-.+++  ++|+... ||.-.  +-+..+ ||+..+.
T Consensus       210 ~~I~~d~v~~p~~~S~~f~nf--l~gLL~k-dP~~RltW~~Ll~HpF~k~~~  258 (808)
T KOG0597|consen  210 KSILKDPVKPPSTASSSFVNF--LQGLLIK-DPAQRLTWTDLLGHPFWKGKI  258 (808)
T ss_pred             HHHhcCCCCCcccccHHHHHH--HHHHhhc-ChhhcccHHHHhcChHHhhhh
Confidence            666778888888666655554  4566533 44433  333222 6655443

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=97.67  E-value=5.9e-05  Score=72.20  Aligned_cols=51  Identities=27%  Similarity=0.425  Sum_probs=43.6

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhh
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKH   92 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~   92 (444)
                      .++..++.+ +..++..|++|+|++|.|++++++|.+.+.|||....+....
T Consensus       104 ~i~~~i~~a-l~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~  154 (287)
T cd07840         104 CYMKQLLEG-LQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRN  154 (287)
T ss_pred             HHHHHHHHH-HHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCC
Confidence            456666665 678999999999999999999999999999999998776543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=97.67  E-value=5.1e-05  Score=75.12  Aligned_cols=51  Identities=22%  Similarity=0.359  Sum_probs=43.6

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhh
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKH   92 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~   92 (444)
                      .++..++.+ +..++..|++|+|++|+||+++.+|++.+.|||+........
T Consensus       107 ~i~~~l~~~-l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~  157 (330)
T cd07834         107 YFLYQILRG-LKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDE  157 (330)
T ss_pred             HHHHHHHHH-HHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccc
Confidence            455555555 678899999999999999999999999999999999887653

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=97.67  E-value=4.1e-05  Score=73.63  Aligned_cols=50  Identities=24%  Similarity=0.341  Sum_probs=42.2

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      ..++..++.+ +..+|..|++|+|++|.||+++.+|.+.+.|||+...+..
T Consensus       104 ~~~~~qi~~~-L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  153 (285)
T cd07861         104 KSYLYQILQG-ILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGI  153 (285)
T ss_pred             HHHHHHHHHH-HHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCC
Confidence            3455666665 6888999999999999999999999999999999876543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=97.66  E-value=7.6e-05  Score=72.28  Aligned_cols=87  Identities=14%  Similarity=0.135  Sum_probs=56.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCC--chhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSS--THLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~--~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLv   78 (444)
                      |||++|+.+.++........ ....  .......+.. .....++..++.+ +..+|..|++|+|.+|.||+++.++.+.
T Consensus        86 ~e~~~~~~L~~~i~~~~~~~-~~~~~~~~~~~~~l~~-~~~~~~~~qi~~a-l~~LH~~~i~H~dlkp~nil~~~~~~~k  162 (280)
T cd05092          86 FEYMRHGDLNRFLRSHGPDA-KILAGGEDVAPGQLTL-GQMLAIASQIASG-MVYLASLHFVHRDLATRNCLVGQGLVVK  162 (280)
T ss_pred             EecCCCCCHHHHHHhcCcch-hhhcccccCCccccCH-HHHHHHHHHHHHH-HHHHHHCCeecccccHhhEEEcCCCCEE
Confidence            68999999988875321100 0000  0000000111 1223455555555 6788999999999999999999999999


Q ss_pred             EEecccccccch
Q 013370           79 FLDFGLLCRMER   90 (444)
Q Consensus        79 lLDFGmv~~L~~   90 (444)
                      +.|||+...+..
T Consensus       163 L~dfg~~~~~~~  174 (280)
T cd05092         163 IGDFGMSRDIYS  174 (280)
T ss_pred             ECCCCceeEcCC
Confidence            999999876643

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=97.66  E-value=7.5e-05  Score=71.51  Aligned_cols=73  Identities=25%  Similarity=0.309  Sum_probs=54.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.+...-....        +...       ...++..++.+ +..+|..|++|+|.+|.||+++.++++.+.
T Consensus        85 ~e~~~~~~L~~~l~~~~~l--------~~~~-------~~~~~~qi~~~-l~~LH~~~i~H~~l~p~nil~~~~~~~~l~  148 (266)
T cd06651          85 MEYMPGGSVKDQLKAYGAL--------TESV-------TRKYTRQILEG-MSYLHSNMIVHRDIKGANILRDSAGNVKLG  148 (266)
T ss_pred             EeCCCCCcHHHHHHHcCCC--------CHHH-------HHHHHHHHHHH-HHHHHhCCeeeCCCCHHHEEECCCCCEEEc
Confidence            6899999998876532111        1111       22445555544 678899999999999999999999999999


Q ss_pred             ecccccccc
Q 013370           81 DFGLLCRME   89 (444)
Q Consensus        81 DFGmv~~L~   89 (444)
                      |||....+.
T Consensus       149 dfg~~~~~~  157 (266)
T cd06651         149 DFGASKRLQ  157 (266)
T ss_pred             cCCCccccc
Confidence            999887664

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=97.66  E-value=7.5e-05  Score=73.41  Aligned_cols=76  Identities=20%  Similarity=0.223  Sum_probs=55.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+.|+.+.+......+       .++.+.       ...++..++.+ +..+|..|++|+|++|.||++..++.+.+.
T Consensus        87 ~e~~~~g~l~~~~~~~~~-------~~~~~~-------~~~~~~qi~~~-L~~LH~~~ivH~dikp~Nill~~~~~~kL~  151 (303)
T cd05110          87 TQLMPHGCLLDYVHEHKD-------NIGSQL-------LLNWCVQIAKG-MMYLEERRLVHRDLAARNVLVKSPNHVKIT  151 (303)
T ss_pred             ehhcCCCCHHHHHHhccc-------CCCHHH-------HHHHHHHHHHH-HHHHhhcCeeccccccceeeecCCCceEEc
Confidence            678888888877643211       011111       23455555555 678899999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||....++..
T Consensus       152 Dfg~~~~~~~~  162 (303)
T cd05110         152 DFGLARLLEGD  162 (303)
T ss_pred             cccccccccCc
Confidence            99999877643

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=97.65  E-value=7.6e-05  Score=76.53  Aligned_cols=50  Identities=20%  Similarity=0.246  Sum_probs=42.2

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      ..++..++.+ +..+|..|++|+|++|.||+++.++.+.+.|||+...+..
T Consensus       215 ~~i~~qi~~a-L~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~  264 (374)
T cd05106         215 LRFSSQVAQG-MDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMN  264 (374)
T ss_pred             HHHHHHHHHH-HHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccC
Confidence            3455555555 7889999999999999999999999999999999877654

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=97.64  E-value=9.6e-05  Score=71.87  Aligned_cols=82  Identities=15%  Similarity=0.190  Sum_probs=56.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCC-----CCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCC
Q 013370            1 MEWMVGESPTDLISLSTGSSV-----DGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG   75 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~-----~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DG   75 (444)
                      |||++|..|.++.........     .....++..       ....++..++.+ +..+|..|++|+|.+|.||+++++|
T Consensus        86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~ql~~a-L~~lH~~~i~H~dlkp~Nili~~~~  157 (288)
T cd05093          86 FEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQS-------QMLHIAQQIAAG-MVYLASQHFVHRDLATRNCLVGENL  157 (288)
T ss_pred             EEcCCCCCHHHHHHHcCCccccccccCCCCCCCHH-------HHHHHHHHHHHH-HHHHHhCCeeecccCcceEEEccCC
Confidence            789999999887653211000     000011122       123455555555 6788999999999999999999999


Q ss_pred             cEEEEecccccccch
Q 013370           76 QIGFLDFGLLCRMER   90 (444)
Q Consensus        76 rLvlLDFGmv~~L~~   90 (444)
                      .+.+.|||+...+..
T Consensus       158 ~~kl~dfg~~~~~~~  172 (288)
T cd05093         158 LVKIGDFGMSRDVYS  172 (288)
T ss_pred             cEEeccCCccccccC
Confidence            999999999876643

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=97.64  E-value=9.9e-05  Score=71.50  Aligned_cols=49  Identities=20%  Similarity=0.356  Sum_probs=41.0

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEcc-CCcEEEEecccccccch
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTS-SGQIGFLDFGLLCRMER   90 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~-DGrLvlLDFGmv~~L~~   90 (444)
                      .++..++.+ +..++..|++|+|++|.||+++. +|.+.+.|||+...+..
T Consensus       114 ~~~~qi~~~-L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~  163 (295)
T cd07837         114 SFMYQLLKG-VAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSI  163 (295)
T ss_pred             HHHHHHHHH-HHHHHHCCeeecCCChHHEEEecCCCeEEEeecccceecCC
Confidence            455555554 78899999999999999999998 89999999998876543

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=97.63  E-value=0.00012  Score=67.87  Aligned_cols=59  Identities=22%  Similarity=0.326  Sum_probs=35.7

Q ss_pred             HcCccccCCCCCCeEEc-cCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHH
Q 013370           56 ETGILHADPHPGNLRYT-SSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLT  116 (444)
Q Consensus        56 ~~GfFHADPHPGNILv~-~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~  116 (444)
                      ..+++|+|+||+||+++ .+|++++|||+.++.-++..  .+..++.+..........+.+.
T Consensus       165 ~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~~~~~~--Dla~~~~~~~~~~~~~~~~~~~  224 (239)
T PF01636_consen  165 PPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGWGDPAY--DLARLLRHFGEDQDPEFRRAYL  224 (239)
T ss_dssp             CEEEE-SS-SGGGEEEESSTTEEEE--GTT-EEEETHH--HHHHHHHHHTTHCHHHHHHHHH
T ss_pred             CcEEEEeccccccceeeeccceeEEEecccceECCHHH--HHHHHHHHhcccCCHHHHHHHH
Confidence            46899999999999999 67888999999988776642  2333333333334444444443

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>PHA03209 serine/threonine kinase US3; Provisional

Probab=97.62  E-value=7.4e-05  Score=75.86  Aligned_cols=47  Identities=23%  Similarity=0.212  Sum_probs=40.4

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccc
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCR   87 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~   87 (444)
                      ..++..++.+ +..||..|++|+|++|.||+++.+|.+.++|||....
T Consensus       160 ~~i~~qi~~a-L~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~  206 (357)
T PHA03209        160 LIIEKQILEG-LRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQF  206 (357)
T ss_pred             HHHHHHHHHH-HHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccc
Confidence            3455555555 7889999999999999999999999999999998764

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=97.61  E-value=9.3e-05  Score=70.56  Aligned_cols=81  Identities=22%  Similarity=0.224  Sum_probs=54.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCC-----
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG-----   75 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DG-----   75 (444)
                      |||++|++|.+..........       +...... .....++..++.+ +..+|..|++|+|++|.||++++++     
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~~-------~~~~~~~-~~~~~~~~~l~~~-l~~lH~~~i~H~dl~p~nil~~~~~~~~~~  148 (269)
T cd05044          78 MELMEGGDLLSYLRDARVERF-------GPPLLTL-KELLDICLDVAKG-CVYLEQMHFIHRDLAARNCLVSEKGYDADR  148 (269)
T ss_pred             EeccCCCcHHHHHHHhhhccc-------CCccccH-HHHHHHHHHHHHH-HHHHHhCCcccCCCChheEEEecCCCCCCc
Confidence            789999999887753211000       0000111 1123445555544 6778999999999999999999988     


Q ss_pred             cEEEEecccccccch
Q 013370           76 QIGFLDFGLLCRMER   90 (444)
Q Consensus        76 rLvlLDFGmv~~L~~   90 (444)
                      .+.+.|||+...+..
T Consensus       149 ~~~l~dfg~~~~~~~  163 (269)
T cd05044         149 VVKIGDFGLARDIYK  163 (269)
T ss_pred             ceEECCccccccccc
Confidence            899999999887643

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=97.61  E-value=0.0001  Score=72.30  Aligned_cols=76  Identities=13%  Similarity=0.149  Sum_probs=56.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.+.++.....+.      .+++.       ....++..++.+ +..+|..|++|+|.+|+||+++.+|.+.+.
T Consensus        78 ~e~~~~~~l~~~l~~~~~~------~~~~~-------~~~~~~~~l~~~-L~~LH~~~ivH~dlk~~Nili~~~~~~kl~  143 (314)
T cd08216          78 SPLMAYGSCEDLLKTHFPE------GLPEL-------AIAFILKDVLNA-LDYIHSKGFIHRSVKASHILLSGDGKVVLS  143 (314)
T ss_pred             EeccCCCCHHHHHHHhccc------CCCHH-------HHHHHHHHHHHH-HHHHHHCCeecCCCCcceEEEecCCceEEe
Confidence            7899999998887643111      11111       122455555555 688899999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||....+..
T Consensus       144 d~~~~~~~~~  153 (314)
T cd08216         144 GLRYSVSMIK  153 (314)
T ss_pred             cCccceeecc
Confidence            9998876654

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=97.61  E-value=5.8e-05  Score=76.00  Aligned_cols=50  Identities=32%  Similarity=0.504  Sum_probs=42.9

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      ..++..++++ +..+|..|++|+|++|.|++++.+|++.++|||+...++.
T Consensus       121 ~~i~~qi~~a-l~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~  170 (343)
T cd07880         121 QFLVYQMLKG-LKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDS  170 (343)
T ss_pred             HHHHHHHHHH-HHHHHhCCeecCCCCHHHEEEcCCCCEEEeeccccccccc
Confidence            3556666665 6889999999999999999999999999999999887654

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=97.61  E-value=9.7e-05  Score=71.77  Aligned_cols=50  Identities=26%  Similarity=0.338  Sum_probs=42.7

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchh
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~   91 (444)
                      .++..++.+ +..|+..|++|+|++|.||+++.+|.+.+.|||....+...
T Consensus       110 ~i~~qi~~a-L~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~  159 (293)
T cd07843         110 CLMLQLLSG-VAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSP  159 (293)
T ss_pred             HHHHHHHHH-HHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCC
Confidence            455555555 78899999999999999999999999999999988877553

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=97.60  E-value=8.3e-05  Score=76.30  Aligned_cols=82  Identities=17%  Similarity=0.193  Sum_probs=60.9

Q ss_pred             HHHHHHcCccccCCCCCCeEEccC-CcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHH
Q 013370           51 LVQLLETGILHADPHPGNLRYTSS-GQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLR  129 (444)
Q Consensus        51 L~QLl~~GfFHADPHPGNILv~~D-GrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~  129 (444)
                      +..|+.+|+.|+|++|-|++|+++ |.+.++|||..+.+.+.+...      +-.+-.|.+..|.+...--.+...|++.
T Consensus       138 l~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epni------SYicSRyYRaPELifga~~Yt~~IDiWS  211 (364)
T KOG0658|consen  138 LAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPNI------SYICSRYYRAPELIFGATEYTTSIDIWS  211 (364)
T ss_pred             HHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeeccCCCce------eEEEeccccCHHHHcCccccCceeEEhh
Confidence            677888999999999999999988 999999999999998876542      1223445566787765555556678885


Q ss_pred             HHHHHHHHH
Q 013370          130 VTMDLEDAL  138 (444)
Q Consensus       130 ~~~~L~~~l  138 (444)
                      ..=-+.+++
T Consensus       212 aGCV~aELl  220 (364)
T KOG0658|consen  212 AGCVMAELL  220 (364)
T ss_pred             hhHHHHHHh
Confidence            543334333

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=97.60  E-value=6.8e-05  Score=74.89  Aligned_cols=95  Identities=14%  Similarity=0.200  Sum_probs=58.9

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhhHH--hHHHHHHHHHhCCHHHHHHHHHhc
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQF--AMLASIVHIVNGDWQSLVHSLTEM  118 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~--~l~~ll~alv~~D~~~la~~l~~l  118 (444)
                      .++..++.+ +..++..|++|+|++|.||+++.+|++.+.|||+...+......  .+....  +....| ...+.+...
T Consensus       111 ~i~~qi~~a-L~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~--~~~~~y-~~PE~~~~~  186 (334)
T cd07855         111 YFLYQLLRG-LKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEY--VATRWY-RAPELLLSL  186 (334)
T ss_pred             HHHHHHHHH-HHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCcCCCcccccc--cccccc-cChHHhcCC
Confidence            455555544 77889999999999999999999999999999998766442211  000000  001111 123444433


Q ss_pred             CCCCCCCChHHHHHHHHHHHh
Q 013370          119 DVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus       119 G~l~~~~d~~~~~~~L~~~l~  139 (444)
                      +..++..|++.+.--+..++.
T Consensus       187 ~~~~~~~Di~slG~~l~el~~  207 (334)
T cd07855         187 PEYTTAIDMWSVGCIFAEMLG  207 (334)
T ss_pred             cccccccchHHHHHHHHHHHc
Confidence            445556777777655555543

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=97.59  E-value=0.00015  Score=69.30  Aligned_cols=51  Identities=24%  Similarity=0.330  Sum_probs=43.2

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchh
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~   91 (444)
                      ..++..++.+ +..++..|++|+|++|.||+++.+|.+.+.|||....+...
T Consensus       101 ~~~~~~i~~~-l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~  151 (282)
T cd07829         101 KSIMYQLLRG-LAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIP  151 (282)
T ss_pred             HHHHHHHHHH-HHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCC
Confidence            3566666655 68899999999999999999999999999999998776543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=97.59  E-value=0.00011  Score=73.36  Aligned_cols=88  Identities=16%  Similarity=0.197  Sum_probs=57.3

Q ss_pred             CCCcCCCCcccHHhhcCC--CCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEE
Q 013370            1 MEWMVGESPTDLISLSTG--SSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G--~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLv   78 (444)
                      |||+.|+.|.++.....+  .+........++...... ....++..++.+ +..+|..|++|+|++|.||+++.+|.+.
T Consensus        97 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~qi~~a-l~~LH~~givH~dlkp~Nill~~~~~~k  174 (334)
T cd05100          97 VEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFK-DLVSCAYQVARG-MEYLASQKCIHRDLAARNVLVTEDNVMK  174 (334)
T ss_pred             EecCCCCcHHHHHHhcCCcccccccccccCccccCCHH-HHHHHHHHHHHH-HHHHHHCCeeccccccceEEEcCCCcEE
Confidence            689999999888764321  100000000011112211 123455555555 6789999999999999999999999999


Q ss_pred             EEecccccccch
Q 013370           79 FLDFGLLCRMER   90 (444)
Q Consensus        79 lLDFGmv~~L~~   90 (444)
                      +.|||....+..
T Consensus       175 L~Dfg~~~~~~~  186 (334)
T cd05100         175 IADFGLARDVHN  186 (334)
T ss_pred             ECCcccceeccc
Confidence            999999876644

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=97.59  E-value=8.3e-05  Score=80.34  Aligned_cols=87  Identities=23%  Similarity=0.319  Sum_probs=55.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchh----------hHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHL----------DRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLR   70 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~----------~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNIL   70 (444)
                      |||++|..|.++..-..|.....+.++.          .....+.. ....++..++.+ +..+|..|++|+|+||.||+
T Consensus       264 ~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~-~~~~i~~ql~~a-L~~lH~~~ivHrDLKp~NIL  341 (507)
T PLN03224        264 WKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDIN-VIKGVMRQVLTG-LRKLHRIGIVHRDIKPENLL  341 (507)
T ss_pred             EEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHH-HHHHHHHHHHHH-HHHHHHCCeecCCCchHhEE
Confidence            6889999998877532211101111110          01111111 123444444444 67899999999999999999


Q ss_pred             EccCCcEEEEecccccccc
Q 013370           71 YTSSGQIGFLDFGLLCRME   89 (444)
Q Consensus        71 v~~DGrLvlLDFGmv~~L~   89 (444)
                      ++.++++.++|||+...+.
T Consensus       342 l~~~~~~kL~DFGla~~~~  360 (507)
T PLN03224        342 VTVDGQVKIIDFGAAVDMC  360 (507)
T ss_pred             ECCCCcEEEEeCcCccccc
Confidence            9999999999999986554

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=97.58  E-value=7.3e-05  Score=73.26  Aligned_cols=74  Identities=22%  Similarity=0.420  Sum_probs=54.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.+.+...-. ..+        ..       ....++..++.+ +..++..|++|+|++|.|++++.+|.+.++
T Consensus        95 ~e~~~~~~L~~~~~~~-~l~--------~~-------~~~~i~~~l~~a-l~~LH~~gi~H~dL~p~Nili~~~~~~kL~  157 (293)
T cd06647          95 MEYLAGGSLTDVVTET-CMD--------EG-------QIAAVCRECLQA-LEFLHSNQVIHRDIKSDNILLGMDGSVKLT  157 (293)
T ss_pred             EecCCCCcHHHHHhhc-CCC--------HH-------HHHHHHHHHHHH-HHHHHhCCEeeccCCHHHEEEcCCCCEEEc
Confidence            6899999988876421 111        11       123445555544 678899999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||....+.+.
T Consensus       158 dfg~~~~~~~~  168 (293)
T cd06647         158 DFGFCAQITPE  168 (293)
T ss_pred             cCcceeccccc
Confidence            99988766554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.57  E-value=8.5e-05  Score=80.49  Aligned_cols=105  Identities=17%  Similarity=0.296  Sum_probs=70.4

Q ss_pred             CCCcCCCCcccHHhhc-CCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLS-TGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~-~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      ||||=|. -+|+.... +++         ++..+       .-+..|+-..|..|+.++.+|+|.+.|||++++.|.+.+
T Consensus       105 MEYClGS-AsDlleVhkKpl---------qEvEI-------AAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKL  167 (948)
T KOG0577|consen  105 MEYCLGS-ASDLLEVHKKPL---------QEVEI-------AAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKL  167 (948)
T ss_pred             HHHHhcc-HHHHHHHHhccc---------hHHHH-------HHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeee
Confidence            8899875 45555543 333         22222       224566667799999999999999999999999999999


Q ss_pred             EecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhc--CCCCCCCChHHHH
Q 013370           80 LDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEM--DVVRPGTNTLRVT  131 (444)
Q Consensus        80 LDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~l--G~l~~~~d~~~~~  131 (444)
                      -|||..+-++|..-  |++       --|=-..+.+..|  |-.+..+|++.+.
T Consensus       168 aDFGSAsi~~PAns--FvG-------TPywMAPEVILAMDEGqYdgkvDvWSLG  212 (948)
T KOG0577|consen  168 ADFGSASIMAPANS--FVG-------TPYWMAPEVILAMDEGQYDGKVDVWSLG  212 (948)
T ss_pred             ccccchhhcCchhc--ccC-------CccccchhHheeccccccCCccceeecc
Confidence            99999998887532  211       1121224555544  4555566776554

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=97.57  E-value=0.00011  Score=76.73  Aligned_cols=75  Identities=25%  Similarity=0.278  Sum_probs=55.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      ||||.|+.|..+.....|.   .   +++.        ..++--.-|-+.|+.||--|++.+|++|.||||.+||.|.|.
T Consensus       156 meyCpGGdL~~LrqkQp~~---~---fse~--------~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLs  221 (459)
T KOG0610|consen  156 MEYCPGGDLHSLRQKQPGK---R---FSES--------AARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLS  221 (459)
T ss_pred             EecCCCccHHHHHhhCCCC---c---cchh--------hHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEee
Confidence            8999999998876543221   1   1111        112333334456899999999999999999999999999999


Q ss_pred             ecccccccc
Q 013370           81 DFGLLCRME   89 (444)
Q Consensus        81 DFGmv~~L~   89 (444)
                      ||-+..+.+
T Consensus       222 DFDLS~~~~  230 (459)
T KOG0610|consen  222 DFDLSLRCP  230 (459)
T ss_pred             eccccccCC
Confidence            998877663

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=97.57  E-value=0.00013  Score=70.35  Aligned_cols=50  Identities=22%  Similarity=0.332  Sum_probs=42.3

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      ..++..++++ +..++..|++|+|+||.|++++++|.+.+.|||....+..
T Consensus       102 ~~~~~~i~~~-L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~  151 (283)
T cd07835         102 KSYLYQLLQG-IAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGV  151 (283)
T ss_pred             HHHHHHHHHH-HHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCC
Confidence            3455666655 6888999999999999999999999999999999876643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>PHA03211 serine/threonine kinase US3; Provisional

Probab=97.56  E-value=8.7e-05  Score=79.11  Aligned_cols=50  Identities=22%  Similarity=0.317  Sum_probs=42.3

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      ..++..++.+ +..+|..|++|+|+||.||+++.+|++.++|||+...+..
T Consensus       263 ~~i~~qi~~a-L~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~  312 (461)
T PHA03211        263 TAVARQLLSA-IDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARG  312 (461)
T ss_pred             HHHHHHHHHH-HHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceeccc
Confidence            3555555555 7889999999999999999999999999999999876643

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=97.56  E-value=0.00011  Score=70.24  Aligned_cols=52  Identities=27%  Similarity=0.380  Sum_probs=44.6

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhh
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKH   92 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~   92 (444)
                      ..++..++++ +..+|..|++|+|+||.||+++.+|.+.++|||....+.+..
T Consensus       101 ~~~~~~i~~~-l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~  152 (283)
T cd05118         101 KSYLYQLLQG-LAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV  152 (283)
T ss_pred             HHHHHHHHHH-HHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc
Confidence            3566666665 688999999999999999999999999999999998886654

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=97.56  E-value=0.00015  Score=69.55  Aligned_cols=51  Identities=31%  Similarity=0.397  Sum_probs=42.9

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchh
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~   91 (444)
                      ..++..++.+ +..+|..|++|+|++|.|++++.+|++.+.|||....++..
T Consensus       110 ~~~~~~i~~a-l~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~  160 (287)
T cd07838         110 KDLMRQLLRG-VDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFE  160 (287)
T ss_pred             HHHHHHHHHH-HHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccCC
Confidence            3455656555 68899999999999999999999999999999998777543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=97.55  E-value=0.00026  Score=75.15  Aligned_cols=47  Identities=32%  Similarity=0.474  Sum_probs=41.4

Q ss_pred             HHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchh
Q 013370           45 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        45 ~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~   91 (444)
                      +-+-+.|..||-.|++|+|++|.|+|++.+|++.+-|||.....+..
T Consensus       217 rDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~  263 (576)
T KOG0585|consen  217 RDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQG  263 (576)
T ss_pred             HHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeeccceeeecccC
Confidence            44556799999999999999999999999999999999998877443

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=97.55  E-value=0.00017  Score=76.02  Aligned_cols=156  Identities=21%  Similarity=0.246  Sum_probs=100.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.+.+.+.-.+|.      .+++++-.++      +++ +. .-+..+|+..+.|+|+++-|||.+.++.+.+=
T Consensus        83 m~Y~eGg~l~~~i~~~k~~------~f~E~~i~~~------~~Q-~~-~av~ylH~~~iLHRDlK~~Nifltk~~~VkLg  148 (426)
T KOG0589|consen   83 MEYCEGGDLAQLIKEQKGV------LFPEERILKW------FVQ-IL-LAVNYLHENRVLHRDLKCANIFLTKDKKVKLG  148 (426)
T ss_pred             EeecCCCCHHHHHHHHhhc------cccHHHHHHH------HHH-HH-HHHHHHHhhhhhcccchhhhhhccccCceeec
Confidence            8999999999998765443      2444433222      222 22 22577899999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHhchhccCCCCcccHHHHHHHHH
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIW  160 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~~~~~~~~l~~~~f~~ll~~l~  160 (444)
                      |||+.+.+.++.  ++...+   +--.+.-..+.+.++-+- ...|.+.+.=.+.++..   ........++..++.++.
T Consensus       149 DfGlaK~l~~~~--~~a~tv---vGTp~YmcPEil~d~pYn-~KSDiWsLGC~~yEm~~---lk~aF~a~~m~~Li~ki~  219 (426)
T KOG0589|consen  149 DFGLAKILNPED--SLASTV---VGTPYYMCPEILSDIPYN-EKSDIWSLGCCLYEMCT---LKPAFKASNMSELILKIN  219 (426)
T ss_pred             chhhhhhcCCch--hhhhee---cCCCcccCHHHhCCCCCC-ccCcchhhcchHHHHHh---cccccCccchHHHHHHHh
Confidence            999999999875  222222   222233335666555333 34678866544444332   233455677888877776


Q ss_pred             HHHHhCCcCCChHHHHHHHHHH
Q 013370          161 SIALKYHFRMPPYYTLVLRSLA  182 (444)
Q Consensus       161 ~l~~~~~~~vP~~~~li~Ral~  182 (444)
                      ...   -..+|..+..=.|.++
T Consensus       220 ~~~---~~Plp~~ys~el~~lv  238 (426)
T KOG0589|consen  220 RGL---YSPLPSMYSSELRSLV  238 (426)
T ss_pred             hcc---CCCCCccccHHHHHHH
Confidence            544   3466666655555443

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=97.55  E-value=0.00035  Score=75.65  Aligned_cols=147  Identities=16%  Similarity=0.147  Sum_probs=93.8

Q ss_pred             CCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEe
Q 013370            2 EWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLD   81 (444)
Q Consensus         2 EwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLD   81 (444)
                      |.|+-..+..+...+..+     +|  +    ++    ..+..+++ +.++.||..|++|+|++-||+|++++-.|.+-|
T Consensus        98 ELC~~~sL~el~Krrk~l-----tE--p----Ea----ry~l~QIv-~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgD  161 (592)
T KOG0575|consen   98 ELCHRGSLMELLKRRKPL-----TE--P----EA----RYFLRQIV-EGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGD  161 (592)
T ss_pred             EecCCccHHHHHHhcCCC-----Cc--H----HH----HHHHHHHH-HHHHHHHhcCceecccchhheeecCcCcEEecc
Confidence            667777777777644322     21  1    11    13444444 448899999999999999999999999999999


Q ss_pred             cccccccchh-hH-HhHHHHHHHHHhCCHHHH-HHHHHhcCCCCCCCChHHHHHHHHHHHhchhccCCCCcccHHHHHHH
Q 013370           82 FGLLCRMERK-HQ-FAMLASIVHIVNGDWQSL-VHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGK  158 (444)
Q Consensus        82 FGmv~~L~~~-~R-~~l~~ll~alv~~D~~~l-a~~l~~lG~l~~~~d~~~~~~~L~~~l~~~~~~~~l~~~~f~~ll~~  158 (444)
                      ||+..++..+ +| .++|.        .+.-+ .|.+.+-|. .-++|++.+.=.+..++-.   ..+...-++.    +
T Consensus       162 FGLAt~le~~~Erk~TlCG--------TPNYIAPEVl~k~gH-sfEvDiWSlGcvmYtLL~G---~PPFetk~vk----e  225 (592)
T KOG0575|consen  162 FGLATQLEYDGERKKTLCG--------TPNYIAPEVLNKSGH-SFEVDIWSLGCVMYTLLVG---RPPFETKTVK----E  225 (592)
T ss_pred             cceeeeecCcccccceecC--------CCcccChhHhccCCC-CCchhhhhhhhHHHhhhhC---CCCcccchHH----H
Confidence            9999999843 44 44543        33333 466655553 3568999887777766532   1233333344    3


Q ss_pred             HHHHHHhCCcCCChHHHHHHHH
Q 013370          159 IWSIALKYHFRMPPYYTLVLRS  180 (444)
Q Consensus       159 l~~l~~~~~~~vP~~~~li~Ra  180 (444)
                      ...........+|..+..-.+.
T Consensus       226 ty~~Ik~~~Y~~P~~ls~~A~d  247 (592)
T KOG0575|consen  226 TYNKIKLNEYSMPSHLSAEAKD  247 (592)
T ss_pred             HHHHHHhcCcccccccCHHHHH
Confidence            4444566667777755443333

>PRK10345 hypothetical protein; Provisional

Probab=97.55  E-value=0.00013  Score=69.99  Aligned_cols=46  Identities=13%  Similarity=-0.011  Sum_probs=36.4

Q ss_pred             HHHHHHHHHHHHHHcCccccCCCCCCeEEccC----CcEEEEeccccccc
Q 013370           43 VNKGVEATLVQLLETGILHADPHPGNLRYTSS----GQIGFLDFGLLCRM   88 (444)
Q Consensus        43 a~~gv~a~L~QLl~~GfFHADPHPGNILv~~D----GrLvlLDFGmv~~L   88 (444)
                      ....+..+.+.+|.+|++|+|++|.||+++..    ++++++|||-...+
T Consensus       110 ~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~~~  159 (210)
T PRK10345        110 LRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGESTF  159 (210)
T ss_pred             HHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCcce
Confidence            45666676788999999999999999999853    38999994444444

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=97.54  E-value=9.4e-05  Score=73.82  Aligned_cols=50  Identities=22%  Similarity=0.374  Sum_probs=41.7

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchh
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~   91 (444)
                      .++..++.+ +..||..|++|+|++|.||+++.+|.+.+.|||+...+...
T Consensus       111 ~i~~qi~~~-L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~  160 (337)
T cd07852         111 YIMYQLLKA-LKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSEL  160 (337)
T ss_pred             HHHHHHHHH-HHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccccc
Confidence            344545444 67889999999999999999999999999999998877543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=97.54  E-value=0.00012  Score=70.57  Aligned_cols=49  Identities=27%  Similarity=0.367  Sum_probs=41.0

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      .++..++.+ +..++..|++|+|++|+||+++.+|.+.+.|||....+..
T Consensus       104 ~~~~~i~~~-l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~  152 (284)
T cd07860         104 SYLFQLLQG-LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV  152 (284)
T ss_pred             HHHHHHHHH-HHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhccc
Confidence            455555554 6788999999999999999999999999999998766543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=97.53  E-value=0.00015  Score=72.15  Aligned_cols=74  Identities=16%  Similarity=0.185  Sum_probs=54.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.+.++.....+.   .   .+..       ....++..++.+ +..+|..|++|+|++|.||+++.+|++.+.
T Consensus        78 ~e~~~~~~l~~~~~~~~~~---~---l~~~-------~~~~i~~qi~~~-L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~  143 (327)
T cd08227          78 TSFMAYGSAKDLICTHFMD---G---MSEL-------AIAYILQGVLKA-LDYIHHMGYVHRSVKASHILISVDGKVYLS  143 (327)
T ss_pred             EeccCCCcHHHHHHhhccC---C---CCHH-------HHHHHHHHHHHH-HHHHHHCCEecCCCChhhEEEecCCcEEEc
Confidence            7999999999987532110   0   1111       123455555554 788999999999999999999999999999


Q ss_pred             eccccccc
Q 013370           81 DFGLLCRM   88 (444)
Q Consensus        81 DFGmv~~L   88 (444)
                      |||....+
T Consensus       144 ~~~~~~~~  151 (327)
T cd08227         144 GLRSNLSM  151 (327)
T ss_pred             ccchhhcc
Confidence            99876544

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=97.53  E-value=0.00074  Score=64.44  Aligned_cols=75  Identities=16%  Similarity=0.086  Sum_probs=53.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCc----
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQ----   76 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGr----   76 (444)
                      |||++|+.|.+......+       ..+..+       ...++..++.+ +..++..|++|+|.+|.|++++++|.    
T Consensus        78 ~e~~~~g~L~~~l~~~~~-------~~~~~~-------~~~~~~qi~~~-l~~lH~~~iiH~dlkp~nili~~~~~~~~~  142 (258)
T cd05078          78 QEYVKFGSLDTYLKKNKN-------LINISW-------KLEVAKQLAWA-LHFLEDKGLTHGNVCAKNVLLIREEDRKTG  142 (258)
T ss_pred             EecCCCCcHHHHHhcCCC-------CCCHHH-------HHHHHHHHHHH-HHHHHHCCeecCCCccceEEEecccccccC
Confidence            799999999888653211       011111       22455555555 67889999999999999999998765    


Q ss_pred             ----EEEEecccccccch
Q 013370           77 ----IGFLDFGLLCRMER   90 (444)
Q Consensus        77 ----LvlLDFGmv~~L~~   90 (444)
                          +.+.|||......+
T Consensus       143 ~~~~~~l~d~g~~~~~~~  160 (258)
T cd05078         143 NPPFIKLSDPGISITVLP  160 (258)
T ss_pred             CCceEEecccccccccCC
Confidence                68999998765543

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=97.52  E-value=0.00012  Score=70.12  Aligned_cols=77  Identities=25%  Similarity=0.293  Sum_probs=53.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEcc-CCcEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTS-SGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~-DGrLvl   79 (444)
                      |||++|.+|.+......+.-      ..++      .....++..++.+ +..+|..|++|+|.+|.||+++. +|++.+
T Consensus        84 ~e~~~~~~L~~~l~~~~~~~------~~~~------~~~~~~~~qi~~a-l~~lH~~~i~h~dl~p~nil~~~~~~~~~l  150 (268)
T cd06624          84 MEQVPGGSLSALLRSKWGPL------KDNE------QTIIFYTKQILEG-LKYLHDNQIVHRDIKGDNVLVNTYSGVVKI  150 (268)
T ss_pred             EecCCCCCHHHHHHHhcccC------CCcH------HHHHHHHHHHHHH-HHHHHHCCEeecCCCHHHEEEcCCCCeEEE
Confidence            68999999998765321100      0000      1122344444444 77889999999999999999976 689999


Q ss_pred             Eecccccccch
Q 013370           80 LDFGLLCRMER   90 (444)
Q Consensus        80 LDFGmv~~L~~   90 (444)
                      .|||....+..
T Consensus       151 ~dfg~~~~~~~  161 (268)
T cd06624         151 SDFGTSKRLAG  161 (268)
T ss_pred             ecchhheeccc
Confidence            99999876643

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=97.52  E-value=0.00013  Score=70.20  Aligned_cols=49  Identities=24%  Similarity=0.386  Sum_probs=41.3

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      .++..++.+ +..++..|++|+|++|.||+++++|++.+.|||+...+..
T Consensus       104 ~~~~qi~~~-l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~  152 (284)
T cd07836         104 SFTYQLLKG-IAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGI  152 (284)
T ss_pred             HHHHHHHHH-HHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcC
Confidence            455555555 6788999999999999999999999999999999876543

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=97.51  E-value=0.00017  Score=69.45  Aligned_cols=73  Identities=14%  Similarity=0.127  Sum_probs=52.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCc----
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQ----   76 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGr----   76 (444)
                      |||++|+.+..+.....+.       ++..+       ...++..++.+ +..+|..|++|+|++|.||++..+|.    
T Consensus        83 ~e~~~~~~l~~~~~~~~~~-------~~~~~-------~~~i~~qi~~~-l~~lH~~~ivH~dlkp~Nill~~~~~~~~~  147 (262)
T cd05077          83 EEFVEFGPLDLFMHRKSDV-------LTTPW-------KFKVAKQLASA-LSYLEDKDLVHGNVCTKNILLAREGIDGEC  147 (262)
T ss_pred             EecccCCCHHHHHHhcCCC-------CCHHH-------HHHHHHHHHHH-HHHhhhCCeECCCCCcccEEEecCCccCCC
Confidence            7999999988776532210       11111       23456666655 78889999999999999999987764    


Q ss_pred             ---EEEEeccccccc
Q 013370           77 ---IGFLDFGLLCRM   88 (444)
Q Consensus        77 ---LvlLDFGmv~~L   88 (444)
                         +.+.|||....+
T Consensus       148 ~~~~~l~d~g~~~~~  162 (262)
T cd05077         148 GPFIKLSDPGIPITV  162 (262)
T ss_pred             CceeEeCCCCCCccc
Confidence               889999987654

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>PHA03210 serine/threonine kinase US3; Provisional

Probab=97.51  E-value=0.0001  Score=78.92  Aligned_cols=49  Identities=20%  Similarity=0.324  Sum_probs=42.4

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      .++..++.+ +..||..|++|+|++|.||+++.+|.+.++|||+...+..
T Consensus       271 ~i~~ql~~a-L~yLH~~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~  319 (501)
T PHA03210        271 AIMKQLLCA-VEYIHDKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEK  319 (501)
T ss_pred             HHHHHHHHH-HHHHHhCCeecCCCCHHHEEECCCCCEEEEeCCCceecCc
Confidence            455555554 8889999999999999999999999999999999987754

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=97.50  E-value=0.00012  Score=71.23  Aligned_cols=50  Identities=26%  Similarity=0.361  Sum_probs=42.5

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchh
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~   91 (444)
                      .++..++.+ +..++..|++|+|++|+||+++.+|.+.+.|||....+...
T Consensus       120 ~i~~qi~~a-L~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~  169 (302)
T cd07864         120 SFMKQLLEG-LNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSE  169 (302)
T ss_pred             HHHHHHHHH-HHHHHhCCeecCCCCHHHEEECCCCcEEeCcccccccccCC
Confidence            455555555 67899999999999999999999999999999998877553

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=97.50  E-value=0.00014  Score=70.24  Aligned_cols=51  Identities=25%  Similarity=0.362  Sum_probs=40.8

Q ss_pred             HHHHHHHHHHHHHHHH-cCccccCCCCCCeEEccCCcEEEEecccccccchhh
Q 013370           41 DLVNKGVEATLVQLLE-TGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKH   92 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~-~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~   92 (444)
                      +++-..+++ +..|++ -.++|+|.+||||+++.+|++.++|||+.+.|.+..
T Consensus       152 kIa~Svv~a-l~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSi  203 (282)
T KOG0984|consen  152 KIAVSVVHA-LEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSI  203 (282)
T ss_pred             HhHHHHHHH-HHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhh
Confidence            455555555 455554 479999999999999999999999999999987653

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=97.49  E-value=0.00014  Score=70.51  Aligned_cols=47  Identities=26%  Similarity=0.371  Sum_probs=39.7

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEeccccccc
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM   88 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L   88 (444)
                      .++..++.+ +..++..|++|+|.+|.|++++.+|++.+.|||.....
T Consensus       107 ~~~~ql~~a-l~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~  153 (291)
T cd07844         107 LFLFQLLRG-LAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAK  153 (291)
T ss_pred             HHHHHHHHH-HHHHHhCCeecccCCHHHEEEcCCCCEEECcccccccc
Confidence            444555544 78899999999999999999999999999999987654

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=97.48  E-value=0.00013  Score=70.85  Aligned_cols=51  Identities=24%  Similarity=0.335  Sum_probs=43.2

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchh
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~   91 (444)
                      ..++..++.+ +..+|..|++|+|.+|.||+++.+|.+.+.|||....+...
T Consensus       122 ~~i~~qi~~a-l~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~  172 (310)
T cd07865         122 KKVMKMLLNG-LYYIHRNKILHRDMKAANILITKDGILKLADFGLARAFSLS  172 (310)
T ss_pred             HHHHHHHHHH-HHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCcccccCC
Confidence            3556665555 78899999999999999999999999999999999877543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=97.48  E-value=0.00013  Score=71.64  Aligned_cols=50  Identities=30%  Similarity=0.286  Sum_probs=42.8

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      ..++..++.+ +..++..|++|+|++|+||+++.+|++.++|||+...+..
T Consensus       111 ~~~~~qi~~~-l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~  160 (309)
T cd07845         111 KCLMLQLLRG-LQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGL  160 (309)
T ss_pred             HHHHHHHHHH-HHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCC
Confidence            3456666655 7889999999999999999999999999999999887754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=97.48  E-value=0.00012  Score=71.13  Aligned_cols=49  Identities=27%  Similarity=0.338  Sum_probs=42.2

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      .++..++++ +..++..|++|+|++|+||+++++|.+.+.|||+......
T Consensus       119 ~i~~~l~~a-l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  167 (311)
T cd07866         119 CYMLQLLEG-INYLHENHILHRDIKAANILIDNQGILKIADFGLARPYDG  167 (311)
T ss_pred             HHHHHHHHH-HHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhccC
Confidence            455555555 7889999999999999999999999999999999887654

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=97.48  E-value=0.00015  Score=75.23  Aligned_cols=77  Identities=22%  Similarity=0.251  Sum_probs=57.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcC-ccccCCCCCCeEEccCC-cEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETG-ILHADPHPGNLRYTSSG-QIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~G-fFHADPHPGNILv~~DG-rLv   78 (444)
                      |||++|+.|.+++.-...      ..++....+       .++..+.+ .+..||..+ ++|+|++|-|+|++.++ .+.
T Consensus       119 tEy~~~GsL~~~l~~~~~------~~l~~~~~l-------~~aldiAr-Gm~YLH~~~~iIHrDLK~~NiLv~~~~~~~K  184 (362)
T KOG0192|consen  119 TEYMPGGSLSVLLHKKRK------RKLPLKVRL-------RIALDIAR-GMEYLHSEGPIIHRDLKSDNILVDLKGKTLK  184 (362)
T ss_pred             EEeCCCCcHHHHHhhccc------CCCCHHHHH-------HHHHHHHH-HHHHHhcCCCeeecccChhhEEEcCCCCEEE
Confidence            899999999999865210      112233333       23333333 477899999 99999999999999998 999


Q ss_pred             EEecccccccchh
Q 013370           79 FLDFGLLCRMERK   91 (444)
Q Consensus        79 lLDFGmv~~L~~~   91 (444)
                      +.|||+.......
T Consensus       185 I~DFGlsr~~~~~  197 (362)
T KOG0192|consen  185 IADFGLSREKVIS  197 (362)
T ss_pred             ECCCccceeeccc
Confidence            9999999776553

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=97.47  E-value=8.4e-05  Score=85.63  Aligned_cols=74  Identities=26%  Similarity=0.355  Sum_probs=57.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      ||||+-..+.++.....         +. .+    ....++|-+.+++. +..+|+-|++|+|++|.|||+++++.+.+-
T Consensus       675 MEyCE~~ll~~iI~~N~---------~~-~~----~d~~wrLFreIlEG-LaYIH~~giIHRDLKP~NIFLd~~~~VKIG  739 (1351)
T KOG1035|consen  675 MEYCEKTLLRDIIRRNH---------FN-SQ----RDEAWRLFREILEG-LAYIHDQGIIHRDLKPRNIFLDSRNSVKIG  739 (1351)
T ss_pred             HhhhhhhHHHHHHHhcc---------cc-hh----hHHHHHHHHHHHHH-HHHHHhCceeeccCCcceeEEcCCCCeeec
Confidence            89999888888775321         10 01    12346777766665 888999999999999999999999999999


Q ss_pred             ecccccccc
Q 013370           81 DFGLLCRME   89 (444)
Q Consensus        81 DFGmv~~L~   89 (444)
                      |||....+-
T Consensus       740 DFGLAt~~~  748 (1351)
T KOG1035|consen  740 DFGLATDLK  748 (1351)
T ss_pred             ccccchhhh
Confidence            999987754

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=97.46  E-value=0.00012  Score=80.02  Aligned_cols=48  Identities=29%  Similarity=0.506  Sum_probs=39.7

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEcc-CCcEEEEecccccccc
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTS-SGQIGFLDFGLLCRME   89 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~-DGrLvlLDFGmv~~L~   89 (444)
                      .++..++.+ +..+|..|++|+|++|.||+++. +|++.++|||+...+.
T Consensus       259 ~i~~qll~a-L~yLH~~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~  307 (566)
T PLN03225        259 TIMRQILFA-LDGLHSTGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLR  307 (566)
T ss_pred             HHHHHHHHH-HHHHHHCCEEeCcCCHHHEEEeCCCCcEEEEeCCCccccc
Confidence            444444444 78899999999999999999986 5899999999987654

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=97.44  E-value=0.00014  Score=73.44  Aligned_cols=46  Identities=33%  Similarity=0.505  Sum_probs=39.3

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCC-----cEEEEeccccc
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG-----QIGFLDFGLLC   86 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DG-----rLvlLDFGmv~   86 (444)
                      ..++.+.+.+ ++++|+.||+|+|.||+|+.+...+     .+.++|||+..
T Consensus       125 l~ia~q~l~~-l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar  175 (322)
T KOG1164|consen  125 LRIAIQNLNA-LEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR  175 (322)
T ss_pred             HHHHHHHHHH-HHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence            4566666666 8999999999999999999998653     59999999998

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=97.44  E-value=0.00047  Score=77.00  Aligned_cols=119  Identities=15%  Similarity=0.157  Sum_probs=79.7

Q ss_pred             CCCcCCCCcccHHhhc--CCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcC--ccccCCCCCCeEEccCCc
Q 013370            1 MEWMVGESPTDLISLS--TGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETG--ILHADPHPGNLRYTSSGQ   76 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~--~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~G--fFHADPHPGNILv~~DGr   76 (444)
                      ||||.|+.|-|+...+  .+++.               ..+.++.....++ ...||--+  ++|+|++-.|+|+..+|.
T Consensus       121 mEyC~gg~Lvd~mn~Rlq~~lte---------------~eVLkIf~dv~~A-Va~mH~~~pPiIHRDLKiENvLls~~g~  184 (738)
T KOG1989|consen  121 MEYCKGGSLVDFMNTRLQTRLTE---------------DEVLKIFYDVCEA-VAAMHYLKPPIIHRDLKIENVLLSADGN  184 (738)
T ss_pred             hhhccCCcHHHHHHHHHhccCCh---------------HHHHHHHHHHHHH-HHHHhcCCCccchhhhhhhheEEcCCCC
Confidence            9999999999998754  23321               1234566666666 56678777  999999999999999999


Q ss_pred             EEEEecccccccchhh-HHhHHHHHHHHHh------CCHHHHHHHHHhcCCCCCCCChHHHHHHHHH
Q 013370           77 IGFLDFGLLCRMERKH-QFAMLASIVHIVN------GDWQSLVHSLTEMDVVRPGTNTLRVTMDLED  136 (444)
Q Consensus        77 LvlLDFGmv~~L~~~~-R~~l~~ll~alv~------~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~  136 (444)
                      .+|+|||.+...-... ...=+.++..=++      -...++.+.+..++ +.+..|+|++.--|+.
T Consensus       185 ~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~p-I~eKsDIWALGclLYk  250 (738)
T KOG1989|consen  185 YKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLP-IGEKSDIWALGCLLYK  250 (738)
T ss_pred             EEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCC-CcchhHHHHHHHHHHH
Confidence            9999999998654322 1111222222111      12356777777665 4466799977655554

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=97.40  E-value=0.00028  Score=67.93  Aligned_cols=82  Identities=12%  Similarity=0.084  Sum_probs=54.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      +||..|..+.+........+-..-..++..       ....++..++.+ +..+|..|++|+|++|.|++++.++.+.+.
T Consensus        88 ~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~-------~~~~i~~~i~~~-l~~LH~~~i~H~di~p~nil~~~~~~~kl~  159 (280)
T cd05043          88 YPYMNWGNLKLFLQQCRLGEANNPQALSTQ-------QLVHMAIQIACG-MSYLHKRGVIHKDIAARNCVIDEELQVKIT  159 (280)
T ss_pred             EEcCCCCcHHHHHHhccccccccccCCCHH-------HHHHHHHHHHHH-HHHHHHCCEeecccCHhhEEEcCCCcEEEC
Confidence            467788888877653210000000011111       123455555555 688999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+.+
T Consensus       160 d~g~~~~~~~  169 (280)
T cd05043         160 DNALSRDLFP  169 (280)
T ss_pred             CCCCcccccC
Confidence            9999876644

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=97.39  E-value=0.00025  Score=73.94  Aligned_cols=49  Identities=16%  Similarity=0.219  Sum_probs=40.8

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      .++..++.+ +..+|..|++|+|++|.||+++.++.+.+.|||+...+..
T Consensus       241 ~~~~qi~~a-L~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~  289 (400)
T cd05105         241 SFTYQVARG-MEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMH  289 (400)
T ss_pred             HHHHHHHHH-HHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceeccc
Confidence            344455544 6788999999999999999999999999999999876543

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=97.38  E-value=0.00019  Score=74.91  Aligned_cols=116  Identities=22%  Similarity=0.257  Sum_probs=76.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccC----Cc
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS----GQ   76 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~D----Gr   76 (444)
                      ||+++|+.|-|.+... +        |++..   +    ..++...+++ ++++|..|++|+|.+|.|+++...    |+
T Consensus       115 mEL~~GGeLfd~i~~~-~--------~sE~d---a----~~~~~~il~a-v~~lH~~gvvHrDlKpEN~L~~~~~~~~~~  177 (382)
T KOG0032|consen  115 MELCEGGELFDRIVKK-H--------YSERD---A----AGIIRQILEA-VKYLHSLGVVHRDLKPENLLLASKDEGSGR  177 (382)
T ss_pred             EEecCCchHHHHHHHc-c--------CCHHH---H----HHHHHHHHHH-HHHHHhCCceeccCCHHHeeeccccCCCCc
Confidence            8999999999987643 1        22221   1    2344444444 899999999999999999999743    68


Q ss_pred             EEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHhc
Q 013370           77 IGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGE  140 (444)
Q Consensus        77 LvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~~  140 (444)
                      +.++|||+...+.+..+...       +.+-..-++-.........+..|++.+..-+.-++..
T Consensus       178 ik~~DFGla~~~~~~~~~~~-------~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G  234 (382)
T KOG0032|consen  178 IKLIDFGLAKFIKPGERLHT-------IVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSG  234 (382)
T ss_pred             EEEeeCCCceEccCCceEee-------ecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhC
Confidence            99999999999887322211       1122333332222223445668888877666666654

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=97.38  E-value=0.001  Score=62.63  Aligned_cols=77  Identities=22%  Similarity=0.298  Sum_probs=54.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCc-EEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQ-IGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGr-Lvl   79 (444)
                      |||+.|..+.+......+..      .+...       ...++..++++ +..++..|++|+|++|.||+++++|. +.+
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~------~~~~~-------~~~~~~~l~~~-l~~lh~~~i~H~dl~~~nil~~~~~~~~~l  143 (257)
T cd08225          78 MEYCDGGDLMKRINRQRGVL------FSEDQ-------ILSWFVQISLG-LKHIHDRKILHRDIKSQNIFLSKNGMVAKL  143 (257)
T ss_pred             EecCCCCcHHHHHHhccCCC------CCHHH-------HHHHHHHHHHH-HHHHHHCCcccccCCHHHEEEcCCCCeEEe
Confidence            68999999988765432211      11111       22444454444 67889999999999999999998875 589


Q ss_pred             Eecccccccchh
Q 013370           80 LDFGLLCRMERK   91 (444)
Q Consensus        80 LDFGmv~~L~~~   91 (444)
                      .|||....+...
T Consensus       144 ~d~~~~~~~~~~  155 (257)
T cd08225         144 GDFGIARQLNDS  155 (257)
T ss_pred             cccccchhccCC
Confidence            999988877543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.37  E-value=0.00032  Score=73.44  Aligned_cols=124  Identities=15%  Similarity=0.138  Sum_probs=78.2

Q ss_pred             HHHHHHHHcCccccCCCCCCeEEccCCcEEEEeccccccc--chhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCC
Q 013370           49 ATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM--ERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTN  126 (444)
Q Consensus        49 a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L--~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d  126 (444)
                      ..|--|+..|++.+|++-.|++++.+|.+.+.||||+.+-  +..+-..++        +.++-++-.++...-....+|
T Consensus       461 igLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~TTkTFC--------GTPdYiAPEIi~YqPYgksvD  532 (683)
T KOG0696|consen  461 IGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVTTKTFC--------GTPDYIAPEIIAYQPYGKSVD  532 (683)
T ss_pred             HHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccccCCcceeeec--------CCCcccccceEEecccccchh
Confidence            3455688999999999999999999999999999999852  333334444        333344444443333444567


Q ss_pred             hHHHHHHHHHHHhchhccCCCCcccHHHHHHHHHHHHHhCCcCCChHHHHHHHHHHH
Q 013370          127 TLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLAS  183 (444)
Q Consensus       127 ~~~~~~~L~~~l~~~~~~~~l~~~~f~~ll~~l~~l~~~~~~~vP~~~~li~Ral~~  183 (444)
                      -+++.--|.+++...   .+...-+=.++...+++--..||-.+..+-+-+.+++++
T Consensus       533 WWa~GVLLyEmlaGQ---pPFdGeDE~elF~aI~ehnvsyPKslSkEAv~ickg~lt  586 (683)
T KOG0696|consen  533 WWAFGVLLYEMLAGQ---PPFDGEDEDELFQAIMEHNVSYPKSLSKEAVAICKGLLT  586 (683)
T ss_pred             HHHHHHHHHHHHcCC---CCCCCCCHHHHHHHHHHccCcCcccccHHHHHHHHHHhh
Confidence            777776677766532   233333334455555544445555555565666665544

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=97.35  E-value=0.00028  Score=70.69  Aligned_cols=37  Identities=30%  Similarity=0.586  Sum_probs=34.6

Q ss_pred             HHcCccccCCCCCCeEEccCCcEEEEecccccccchh
Q 013370           55 LETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        55 l~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~   91 (444)
                      -.||++|+|.+|.||+++..|.+.|+|||+.|+|-+.
T Consensus       209 eKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS  245 (391)
T KOG0983|consen  209 EKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS  245 (391)
T ss_pred             HhcceeecccCccceEEccCCCEEeecccccceeecc
Confidence            3689999999999999999999999999999999774

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=97.33  E-value=0.00042  Score=68.68  Aligned_cols=48  Identities=25%  Similarity=0.476  Sum_probs=39.9

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccc
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME   89 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~   89 (444)
                      .++..++.+ +..++..|++|+|++|.||+++.+|.+.+.|||......
T Consensus       125 ~~~~qi~~a-l~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~  172 (313)
T cd06633         125 AITHGALQG-LAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSS  172 (313)
T ss_pred             HHHHHHHHH-HHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccC
Confidence            344455544 688899999999999999999999999999999876543

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=97.31  E-value=0.00032  Score=70.20  Aligned_cols=94  Identities=20%  Similarity=0.274  Sum_probs=59.5

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcC
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMD  119 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG  119 (444)
                      ..++..++.+ +..++..|++|+|.+|.|++++.+|.+.+.|||.....+.....  .....  ....| ...+.+..-+
T Consensus       111 ~~i~~qi~~a-L~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~--~~~~~--~~~~y-~aPE~~~~~~  184 (337)
T cd07858         111 QYFLYQLLRG-LKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDF--MTEYV--VTRWY-RAPELLLNCS  184 (337)
T ss_pred             HHHHHHHHHH-HHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCccc--ccccc--cccCc-cChHHHhcCC
Confidence            3566666666 68899999999999999999999999999999998776543211  00000  00111 1233333323


Q ss_pred             CCCCCCChHHHHHHHHHHHh
Q 013370          120 VVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus       120 ~l~~~~d~~~~~~~L~~~l~  139 (444)
                      ......|++.+.--+..++.
T Consensus       185 ~~~~~~DiwslG~il~~l~~  204 (337)
T cd07858         185 EYTTAIDVWSVGCIFAELLG  204 (337)
T ss_pred             CCCCcccHHHHHHHHHHHHc
Confidence            34455777777655555543

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=97.31  E-value=0.00026  Score=69.73  Aligned_cols=50  Identities=20%  Similarity=0.337  Sum_probs=40.7

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEc----cCCcEEEEecccccccch
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYT----SSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~----~DGrLvlLDFGmv~~L~~   90 (444)
                      ..++..++.+ +..||..|++|+|++|.||++.    .+|++.++|||+...++.
T Consensus       111 ~~i~~qi~~a-l~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~  164 (317)
T cd07868         111 KSLLYQILDG-IHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS  164 (317)
T ss_pred             HHHHHHHHHH-HHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCC
Confidence            3455665555 7888999999999999999994    568999999999876653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=97.31  E-value=0.00043  Score=67.29  Aligned_cols=48  Identities=21%  Similarity=0.327  Sum_probs=39.2

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEcc-CCcEEEEecccccccc
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTS-SGQIGFLDFGLLCRME   89 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~-DGrLvlLDFGmv~~L~   89 (444)
                      .++..++.+ +..++..|++|+|++|.||+++. ++.+.+.|||+...+.
T Consensus       106 ~~~~qi~~a-L~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~  154 (294)
T PLN00009        106 TYLYQILRG-IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFG  154 (294)
T ss_pred             HHHHHHHHH-HHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccC
Confidence            455555554 78899999999999999999985 4679999999987654

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.30  E-value=0.00014  Score=76.21  Aligned_cols=78  Identities=22%  Similarity=0.282  Sum_probs=59.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.+.+++....-.+.         .-+       .++-+-+.-.+..+|..+..|.|.++.|+++..+|.+.+.
T Consensus        90 Mey~~gGsv~~lL~~~~~~~E---------~~i-------~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~  153 (467)
T KOG0201|consen   90 MEYCGGGSVLDLLKSGNILDE---------FEI-------AVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLA  153 (467)
T ss_pred             HHHhcCcchhhhhccCCCCcc---------cee-------eeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEE
Confidence            899999999999875321121         111       1222333334778999999999999999999999999999


Q ss_pred             ecccccccchhhHH
Q 013370           81 DFGLLCRMERKHQF   94 (444)
Q Consensus        81 DFGmv~~L~~~~R~   94 (444)
                      |||..++++.....
T Consensus       154 DfgVa~ql~~~~~r  167 (467)
T KOG0201|consen  154 DFGVAGQLTNTVKR  167 (467)
T ss_pred             ecceeeeeechhhc
Confidence            99999999886544

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=97.28  E-value=0.00033  Score=67.41  Aligned_cols=74  Identities=30%  Similarity=0.440  Sum_probs=54.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+++++|.+.+....+.      .++..+.       ..++..++.+ +..|+..|++|+|++|.|++++.+|.+.+.
T Consensus        80 ~e~~~~g~L~~~L~~~~~~------~~~~~~~-------~~i~~~i~~~-l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~  145 (259)
T PF07714_consen   80 MEYCPGGSLDDYLKSKNKE------PLSEQQR-------LSIAIQIAEA-LSYLHSNNIIHGNLSPSNILLDSNGQVKLS  145 (259)
T ss_dssp             EE--TTEBHHHHHHHTCTT------TSBHHHH-------HHHHHHHHHH-HHHHHHTTEEEST-SGGGEEEETTTEEEEE
T ss_pred             ccccccccccccccccccc------ccccccc-------cccccccccc-cccccccccccccccccccccccccccccc
Confidence            6899999999988754111      1223332       3455554444 788999999999999999999999999999


Q ss_pred             eccccccc
Q 013370           81 DFGLLCRM   88 (444)
Q Consensus        81 DFGmv~~L   88 (444)
                      |||+....
T Consensus       146 ~f~~~~~~  153 (259)
T PF07714_consen  146 DFGLSRPI  153 (259)
T ss_dssp             STTTGEET
T ss_pred             cccccccc
Confidence            99999887

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=97.27  E-value=0.00031  Score=68.92  Aligned_cols=49  Identities=20%  Similarity=0.362  Sum_probs=40.2

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEE----ccCCcEEEEecccccccch
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRY----TSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv----~~DGrLvlLDFGmv~~L~~   90 (444)
                      .++..++.+ +..+|..|++|+|++|.||++    ..+|++.+.|||+...+..
T Consensus       112 ~i~~qi~~a-L~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~  164 (317)
T cd07867         112 SLLYQILDG-IHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS  164 (317)
T ss_pred             HHHHHHHHH-HHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCC
Confidence            455555554 788999999999999999999    4568999999999877654

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=97.27  E-value=0.00082  Score=77.75  Aligned_cols=120  Identities=14%  Similarity=0.073  Sum_probs=68.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHc-------CccccCCCCCCeEEcc
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLET-------GILHADPHPGNLRYTS   73 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~-------GfFHADPHPGNILv~~   73 (444)
                      |||++|+.|.+++....... .   .++.       ..++.++..++.+ |..||..       |++|+|++|.|||++.
T Consensus        93 MEY~~gGSL~~lL~k~~~~~-g---~L~E-------~~Il~Ia~QIL~A-LaYLHs~g~~~~~k~IVHRDLKPeNILL~s  160 (1021)
T PTZ00266         93 MEFCDAGDLSRNIQKCYKMF-G---KIEE-------HAIVDITRQLLHA-LAYCHNLKDGPNGERVLHRDLKPQNIFLST  160 (1021)
T ss_pred             EeCCCCCcHHHHHHHHhhcc-C---CCCH-------HHHHHHHHHHHHH-HHHHHhcccccccCCceeccCcHHHeEeec
Confidence            89999999998775321000 0   0111       1233555555554 6677774       4999999999999965


Q ss_pred             C-----------------CcEEEEecccccccchhhHHhHHHHHHHHHhCCHH-HHHHHHHh-cCCCCCCCChHHHHHHH
Q 013370           74 S-----------------GQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQ-SLVHSLTE-MDVVRPGTNTLRVTMDL  134 (444)
Q Consensus        74 D-----------------GrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~-~la~~l~~-lG~l~~~~d~~~~~~~L  134 (444)
                      +                 +.+.++|||+...+........       ..+... ...+.+.. -+...+..|++.|.--+
T Consensus       161 ~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s-------~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~IL  233 (1021)
T PTZ00266        161 GIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHS-------CVGTPYYWSPELLLHETKSYDDKSDMWALGCII  233 (1021)
T ss_pred             CccccccccccccccCCCCceEEccCCccccccccccccc-------cCCCccccCHHHHhccCCCCCchhHHHHHHHHH
Confidence            3                 3488999999877654321110       011111 12343332 12344557888877666


Q ss_pred             HHHHh
Q 013370          135 EDALG  139 (444)
Q Consensus       135 ~~~l~  139 (444)
                      ..++.
T Consensus       234 YELLT  238 (1021)
T PTZ00266        234 YELCS  238 (1021)
T ss_pred             HHHHH
Confidence            66554

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=97.25  E-value=0.0003  Score=75.75  Aligned_cols=90  Identities=21%  Similarity=0.358  Sum_probs=57.5

Q ss_pred             HHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCC---
Q 013370           44 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDV---  120 (444)
Q Consensus        44 ~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~---  120 (444)
                      +.+++| .+-+|++|++|+|++|.|+++- +|+|.+||||+...+.+++-..+-+.=++.+  +|.. .+++..+-.   
T Consensus       467 kqML~a-V~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~--NYMs-PEAl~~~~s~~~  541 (677)
T KOG0596|consen  467 KQMLLA-VKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTSIVKDSQVGTV--NYMS-PEALTDMSSSRE  541 (677)
T ss_pred             HHHHHH-HHHHHHhceeecCCCcccEEEE-eeeEEeeeechhcccCccccceeeccccCcc--cccC-HHHHhhcccccc
Confidence            344444 6678999999999999998864 5999999999999998875443332222221  2222 455554432   


Q ss_pred             -------CCCCCChHHHHHHHHHHH
Q 013370          121 -------VRPGTNTLRVTMDLEDAL  138 (444)
Q Consensus       121 -------l~~~~d~~~~~~~L~~~l  138 (444)
                             +.+..|++.+.=-|+.++
T Consensus       542 ~~~~k~Ki~r~SDvWSLGCILYqMv  566 (677)
T KOG0596|consen  542 NGKSKIKISRKSDVWSLGCILYQMV  566 (677)
T ss_pred             CCCcceeecCccchhhhhhHHHHHH
Confidence                   233457776654444443

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=97.25  E-value=0.00043  Score=68.32  Aligned_cols=49  Identities=22%  Similarity=0.404  Sum_probs=40.6

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      .++..++.+ +..+|..|++|+|.+|.||+++.+|.+.+.|||....+.+
T Consensus       119 ~~~~~l~~~-l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~  167 (308)
T cd06634         119 AVTHGALQG-LAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP  167 (308)
T ss_pred             HHHHHHHHH-HHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecC
Confidence            344444443 6888999999999999999999999999999999877654

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=97.25  E-value=0.00016  Score=73.04  Aligned_cols=76  Identities=21%  Similarity=0.331  Sum_probs=56.9

Q ss_pred             CCCcCCCCcccHHhhcC-CCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLST-GSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~-G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      ||||..++++|+...+. .++         ++.+.      .+.+.-+ -.|+.|+.-.-+|+|.+.|||++..+|.-.+
T Consensus       107 MEYCGAGSiSDI~R~R~K~L~---------E~EIs------~iL~~TL-KGL~YLH~~~KIHRDIKAGNILLNT~G~AKL  170 (502)
T KOG0574|consen  107 MEYCGAGSISDIMRARRKPLS---------EQEIS------AVLRDTL-KGLQYLHDLKKIHRDIKAGNILLNTDGIAKL  170 (502)
T ss_pred             hhhcCCCcHHHHHHHhcCCcc---------HHHHH------HHHHHHH-hHHHHHHHHHHHHhhcccccEEEcccchhhh
Confidence            89999999999998763 221         22221      1222111 1356677778899999999999999999999


Q ss_pred             Eecccccccchhh
Q 013370           80 LDFGLLCRMERKH   92 (444)
Q Consensus        80 LDFGmv~~L~~~~   92 (444)
                      .|||..++|++.+
T Consensus       171 ADFGVAGQLTDTM  183 (502)
T KOG0574|consen  171 ADFGVAGQLTDTM  183 (502)
T ss_pred             hhccccchhhhhH
Confidence            9999999999864

>PLN00181 protein SPA1-RELATED; Provisional

Probab=97.25  E-value=0.00047  Score=77.85  Aligned_cols=48  Identities=15%  Similarity=0.223  Sum_probs=39.3

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEeccccccc
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM   88 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L   88 (444)
                      ..++..++++ +..+|..|++|+|++|.|||+++.|++.++|||++...
T Consensus        83 ~~i~~qi~~a-l~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~  130 (793)
T PLN00181         83 FHVFRQIVEI-VNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDS  130 (793)
T ss_pred             HHHHHHHHHH-HHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcc
Confidence            3556666655 78899999999999999999998888888888877554

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=97.23  E-value=0.00045  Score=67.46  Aligned_cols=49  Identities=33%  Similarity=0.531  Sum_probs=39.9

Q ss_pred             HHHHHHHHHHHHHHHH-cCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           41 DLVNKGVEATLVQLLE-TGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~-~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      .++..++.+ +..+|. .|++|+|++|.||+++.+|.+.++|||+...+..
T Consensus       118 ~i~~~i~~~-l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~  167 (296)
T cd06618         118 KMTVAIVKA-LHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVD  167 (296)
T ss_pred             HHHHHHHHH-HHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccC
Confidence            345554444 567786 6999999999999999999999999999877654

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>PTZ00284 protein kinase; Provisional

Probab=97.21  E-value=0.00046  Score=72.81  Aligned_cols=46  Identities=22%  Similarity=0.361  Sum_probs=36.7

Q ss_pred             HHHHHHHHHHHHHHHH-cCccccCCCCCCeEEccCC----------------cEEEEecccccc
Q 013370           41 DLVNKGVEATLVQLLE-TGILHADPHPGNLRYTSSG----------------QIGFLDFGLLCR   87 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~-~GfFHADPHPGNILv~~DG----------------rLvlLDFGmv~~   87 (444)
                      .++..++.+ +..||. .|++|+|++|.||+++.+|                ++.++|||....
T Consensus       235 ~i~~qi~~a-L~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~  297 (467)
T PTZ00284        235 QIIFQTGVA-LDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCD  297 (467)
T ss_pred             HHHHHHHHH-HHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCcccc
Confidence            455555554 788887 5999999999999998766                489999997654

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=97.21  E-value=0.00036  Score=68.95  Aligned_cols=48  Identities=25%  Similarity=0.296  Sum_probs=43.0

Q ss_pred             HHHHHHHHHHHHHcC--ccccCCCCCCeEEccCCcEEEEecccccccchh
Q 013370           44 NKGVEATLVQLLETG--ILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        44 ~~gv~a~L~QLl~~G--fFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~   91 (444)
                      -.++...++++|+.+  +-|+|.+|+||+...+|..++.|||.|...+-.
T Consensus       133 f~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~  182 (302)
T KOG2345|consen  133 FLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQ  182 (302)
T ss_pred             HHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccccceE
Confidence            356667799999999  999999999999999999999999999988753

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=97.19  E-value=0.00046  Score=65.94  Aligned_cols=49  Identities=16%  Similarity=0.203  Sum_probs=41.5

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccc
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME   89 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~   89 (444)
                      ..++..++.+ +..+|..|++|+|++|.||+++.++.+.+.|||....+.
T Consensus       116 ~~~~~~i~~~-l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~  164 (273)
T cd05074         116 VRFMIDIASG-MEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIY  164 (273)
T ss_pred             HHHHHHHHHH-HHHHHhCCEeecccchhhEEEcCCCCEEECccccccccc
Confidence            3555655555 688899999999999999999999999999999887664

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=97.18  E-value=0.00047  Score=69.27  Aligned_cols=49  Identities=33%  Similarity=0.500  Sum_probs=41.1

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      .++..++.+ +..+|..|++|+|++|.||+++.+|++.+.|||+....+.
T Consensus       121 ~~~~qi~~a-L~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~  169 (342)
T cd07879         121 YLVYQMLCG-LKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADA  169 (342)
T ss_pred             HHHHHHHHH-HHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCC
Confidence            344455544 6888999999999999999999999999999999877654

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=97.13  E-value=0.002  Score=61.24  Aligned_cols=74  Identities=18%  Similarity=0.190  Sum_probs=51.5

Q ss_pred             CCCcCCCCcccHHhhc--CCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEE
Q 013370            1 MEWMVGESPTDLISLS--TGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~--~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLv   78 (444)
                      |||+.|..+.+.....  .+.      ..+..       ....++..++.+ +..++..|++|+|+.|.|++++ ++.+.
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~------~~~~~-------~~~~~~~~l~~~-l~~lH~~~i~h~~l~~~nili~-~~~~~  145 (260)
T cd08222          81 TEYCEGRDLDCKLEELKHTGK------TLSEN-------QVCEWFIQLLLG-VHYMHQRRILHRDLKAKNIFLK-NNLLK  145 (260)
T ss_pred             EEeCCCCCHHHHHHHHhhccc------ccCHH-------HHHHHHHHHHHH-HHHHHHcCccccCCChhheEee-cCCEe
Confidence            6889999888776431  110      01111       123445555554 6789999999999999999996 57899


Q ss_pred             EEecccccccc
Q 013370           79 FLDFGLLCRME   89 (444)
Q Consensus        79 lLDFGmv~~L~   89 (444)
                      +.|||....+.
T Consensus       146 l~d~g~~~~~~  156 (260)
T cd08222         146 IGDFGVSRLLM  156 (260)
T ss_pred             ecccCceeecC
Confidence            99999876553

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.12  E-value=0.00046  Score=71.45  Aligned_cols=117  Identities=17%  Similarity=0.177  Sum_probs=75.2

Q ss_pred             CCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcC---ccccCCCCCCeEEccCCcEE
Q 013370            2 EWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETG---ILHADPHPGNLRYTSSGQIG   78 (444)
Q Consensus         2 EwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~G---fFHADPHPGNILv~~DGrLv   78 (444)
                      ||+..++|.|.+.-..+.+    -.|.++.         ++|.-..++ +..||+..   ++|+|.+|.|||++.|.+..
T Consensus       152 Eym~nGsL~d~L~~~~~~~----L~W~~R~---------kIa~g~A~g-L~yLH~~~~~~iiHrDiKssNILLD~~~~aK  217 (361)
T KOG1187|consen  152 EYMPNGSLEDHLHGKKGEP----LDWETRL---------KIALGAARG-LAYLHEGCPPPIIHRDIKSSNILLDEDFNAK  217 (361)
T ss_pred             EccCCCCHHHHhCCCCCCC----CCHHHHH---------HHHHHHHHH-HHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence            7888889988775432111    1233332         344433343 77788765   99999999999999999999


Q ss_pred             EEecccccccch-hhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHH
Q 013370           79 FLDFGLLCRMER-KHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDAL  138 (444)
Q Consensus        79 lLDFGmv~~L~~-~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l  138 (444)
                      +.|||+....+. ........      .+.+.-++..+...|.+....|+..|.--+-+++
T Consensus       218 lsDFGLa~~~~~~~~~~~~~~------~gt~gY~~PEy~~~g~lt~KsDVySFGVvllEli  272 (361)
T KOG1187|consen  218 LSDFGLAKLGPEGDTSVSTTV------MGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELI  272 (361)
T ss_pred             ccCccCcccCCccccceeeec------CCCCccCChhhhccCCcCcccccccchHHHHHHH
Confidence            999999966665 22211000      3444445555555577877778777765554444

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=97.11  E-value=0.00059  Score=68.43  Aligned_cols=53  Identities=25%  Similarity=0.456  Sum_probs=45.6

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhhHH
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQF   94 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~   94 (444)
                      ++++.+++. ...+|...++|+|++|.||+.+++-++.+-|||..+++++..+.
T Consensus       127 ~iMrqlfeg-VeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~GekL  179 (411)
T KOG0599|consen  127 RIMRQLFEG-VEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPGEKL  179 (411)
T ss_pred             HHHHHHHHH-HHHHHHhhhhhcccChhheeeccccceEEeccceeeccCCchhH
Confidence            566666665 56678889999999999999999999999999999999997653

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=97.11  E-value=0.0003  Score=75.49  Aligned_cols=104  Identities=19%  Similarity=0.230  Sum_probs=68.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccC---CcE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS---GQI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~D---GrL   77 (444)
                      ||-+.|--|.=+++...|-=++.               ..++.-+-+-+.|+.|+..|++|||++|.|+++...   .++
T Consensus       642 MEKl~GDMLEMILSsEkgRL~er---------------~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQv  706 (888)
T KOG4236|consen  642 MEKLHGDMLEMILSSEKGRLPER---------------ITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQV  706 (888)
T ss_pred             ehhhcchHHHHHHHhhcccchHH---------------HHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCce
Confidence            77778877776666544321111               123333333445899999999999999999999754   599


Q ss_pred             EEEecccccccchh-hHHhHHHHHHHHHhCCHHH-HHHHHHhcCCCCCCCChH
Q 013370           78 GFLDFGLLCRMERK-HQFAMLASIVHIVNGDWQS-LVHSLTEMDVVRPGTNTL  128 (444)
Q Consensus        78 vlLDFGmv~~L~~~-~R~~l~~ll~alv~~D~~~-la~~l~~lG~l~~~~d~~  128 (444)
                      .++|||...-+.++ +|+...        +..+- ..+.+..-|+. ...|++
T Consensus       707 KlCDFGfARiIgEksFRrsVV--------GTPAYLaPEVLrnkGyN-rSLDMW  750 (888)
T KOG4236|consen  707 KLCDFGFARIIGEKSFRRSVV--------GTPAYLAPEVLRNKGYN-RSLDMW  750 (888)
T ss_pred             eeccccceeecchhhhhhhhc--------CCccccCHHHHhhcccc-ccccce
Confidence            99999999999874 444432        22332 35777777765 334554

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=97.08  E-value=0.00073  Score=68.08  Aligned_cols=50  Identities=26%  Similarity=0.400  Sum_probs=42.2

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      ..++..++++ +..+|..|++|+|++|.||+++.+|.+.++|||+......
T Consensus       123 ~~i~~qi~~a-L~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~  172 (345)
T cd07877         123 QFLIYQILRG-LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD  172 (345)
T ss_pred             HHHHHHHHHH-HHHHHHCCeeecCCChHHEEEcCCCCEEEecccccccccc
Confidence            3455556655 6889999999999999999999999999999999876544

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=97.07  E-value=0.00069  Score=65.08  Aligned_cols=49  Identities=27%  Similarity=0.418  Sum_probs=40.4

Q ss_pred             HHHHHHHHHHHHHHHHc-CccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           41 DLVNKGVEATLVQLLET-GILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~-GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      .++..++.+ +..++.. |++|+|++|+||+++++|++.+.|||....+..
T Consensus       107 ~~~~qi~~~-l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~  156 (283)
T cd06617         107 KIAVSIVKA-LEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD  156 (283)
T ss_pred             HHHHHHHHH-HHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence            445555444 6788887 999999999999999999999999999876643

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=97.07  E-value=0.00065  Score=68.84  Aligned_cols=75  Identities=24%  Similarity=0.327  Sum_probs=54.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccC---CcE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS---GQI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~D---GrL   77 (444)
                      ||+++|+.|-.....++..      .|++++-   .    ++++.+-. .++.+|..++-|+|.+|.|+|++..   --+
T Consensus       138 mE~meGGeLfsriq~~g~~------afTErea---~----eI~~qI~~-Av~~lH~~nIAHRDlKpENLLyt~t~~na~l  203 (400)
T KOG0604|consen  138 MECMEGGELFSRIQDRGDQ------AFTEREA---S----EIMKQIGL-AVRYLHSMNIAHRDLKPENLLYTTTSPNAPL  203 (400)
T ss_pred             eecccchHHHHHHHHcccc------cchHHHH---H----HHHHHHHH-HHHHHHhcchhhccCChhheeeecCCCCcce
Confidence            8999999998877654211      2444432   2    34444333 3788899999999999999999854   479


Q ss_pred             EEEecccccccc
Q 013370           78 GFLDFGLLCRME   89 (444)
Q Consensus        78 vlLDFGmv~~L~   89 (444)
                      .|.|||..++-.
T Consensus       204 KLtDfGFAK~t~  215 (400)
T KOG0604|consen  204 KLTDFGFAKETQ  215 (400)
T ss_pred             EecccccccccC
Confidence            999999998754

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=97.06  E-value=0.0011  Score=65.60  Aligned_cols=50  Identities=20%  Similarity=0.347  Sum_probs=40.7

Q ss_pred             HHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccC---CcEEEEecccccccc
Q 013370           39 LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS---GQIGFLDFGLLCRME   89 (444)
Q Consensus        39 l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~D---GrLvlLDFGmv~~L~   89 (444)
                      ..-|+.+++.- ++.++..||+|+|++|.|++..-+   .++-+||||+.+..-
T Consensus       113 vLMLaDQml~R-iEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~  165 (341)
T KOG1163|consen  113 VLMLADQMLSR-IEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYR  165 (341)
T ss_pred             HHHHHHHHHHH-HHHHHhhccccccCCccceeeccccccceEEEEeccchhhhc
Confidence            34566666655 778899999999999999998643   699999999988654

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=97.06  E-value=0.00035  Score=74.49  Aligned_cols=76  Identities=20%  Similarity=0.256  Sum_probs=52.9

Q ss_pred             HHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHH
Q 013370           51 LVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRV  130 (444)
Q Consensus        51 L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~  130 (444)
                      +..+|..||.|+|++..|||++.+|.|.+-|||+..-.+...+..|..-++-+    |.+..+.+..---..+.+|++..
T Consensus       231 l~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTL----WYRpPELLLG~t~Yg~aVDlWS~  306 (560)
T KOG0600|consen  231 LEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTL----WYRPPELLLGATSYGTAVDLWSV  306 (560)
T ss_pred             HHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCCcccccceEEe----eccChHHhcCCcccccceeehhh
Confidence            44456779999999999999999999999999999978777665543322211    34445555433334455677754

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=97.04  E-value=0.0004  Score=64.33  Aligned_cols=36  Identities=22%  Similarity=0.397  Sum_probs=31.4

Q ss_pred             HcCccccCCCCCCeEEcc--CCcEEEEecccccccchh
Q 013370           56 ETGILHADPHPGNLRYTS--SGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        56 ~~GfFHADPHPGNILv~~--DGrLvlLDFGmv~~L~~~   91 (444)
                      ..+++|+|+||||+++++  ++.+.+|||+.++.-++.
T Consensus       173 ~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g~~~  210 (223)
T cd05154         173 RPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLGDPL  210 (223)
T ss_pred             CcEEEECCCCcccEEEcCCCCcEEEEEeccccccCChH
Confidence            578999999999999999  677899999999876664

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=97.02  E-value=0.00065  Score=67.89  Aligned_cols=49  Identities=22%  Similarity=0.353  Sum_probs=41.7

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      .++..++++ +..+|..|++|+|++|.||+++.+|++.++|||+......
T Consensus       110 ~i~~ql~~a-L~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~  158 (336)
T cd07849         110 YFLYQILRG-LKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADP  158 (336)
T ss_pred             HHHHHHHHH-HHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeeccc
Confidence            455555555 7889999999999999999999999999999998876644

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=97.02  E-value=0.002  Score=61.74  Aligned_cols=35  Identities=26%  Similarity=0.325  Sum_probs=29.9

Q ss_pred             cCccccCCCCCCeEEccCCcEEEEecccccccchh
Q 013370           57 TGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        57 ~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~   91 (444)
                      -.++|+|.||||+++++++..++|||+.++-=++.
T Consensus       163 ~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~gdp~  197 (244)
T cd05150         163 LVVTHGDACLPNIIVDPGKFSGFIDLGRLGVADRY  197 (244)
T ss_pred             eEEECCCCCCccEEEeCCcEEEEEEccccccccHH
Confidence            46999999999999999877889999988755543

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=97.01  E-value=0.00079  Score=67.66  Aligned_cols=49  Identities=20%  Similarity=0.279  Sum_probs=39.8

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEcc-CCcEEEEecccccccch
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTS-SGQIGFLDFGLLCRMER   90 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~-DGrLvlLDFGmv~~L~~   90 (444)
                      .++..++.+ +..++..|++|+|++|+|++++. ++.+.+.|||+...+..
T Consensus       118 ~~~~qi~~a-L~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~  167 (342)
T cd07854         118 LFMYQLLRG-LKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDP  167 (342)
T ss_pred             HHHHHHHHH-HHHHHhCCcccCCCCHHHEEEcCCCceEEECCcccceecCC
Confidence            455555555 77889999999999999999985 56789999999887654

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=97.01  E-value=0.00094  Score=66.52  Aligned_cols=74  Identities=12%  Similarity=0.193  Sum_probs=52.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+.|..+.++.......      ..+..       ....++..++.+ +..+|..|++|+|++|.||++..+|.+.+.
T Consensus        78 ~e~~~~~~l~~~l~~~~~~------~~~~~-------~~~~~~~qi~~a-L~~lH~~~ivHrDlkp~Nill~~~~~~~~~  143 (328)
T cd08226          78 SPFMAYGSANSLLKTYFPE------GMSEA-------LIGNILFGALRG-LNYLHQNGYIHRNIKASHILISGDGLVSLS  143 (328)
T ss_pred             EecccCCCHHHHHHhhccc------CCCHH-------HHHHHHHHHHHH-HHHHHhCCeecCCCCHHHEEEeCCCcEEEe
Confidence            6889998888876532110      01111       123455555555 678899999999999999999999999999


Q ss_pred             eccccccc
Q 013370           81 DFGLLCRM   88 (444)
Q Consensus        81 DFGmv~~L   88 (444)
                      |||.....
T Consensus       144 ~~~~~~~~  151 (328)
T cd08226         144 GLSHLYSL  151 (328)
T ss_pred             chHHHhhh
Confidence            99865433

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=97.00  E-value=0.00058  Score=73.30  Aligned_cols=51  Identities=29%  Similarity=0.406  Sum_probs=40.8

Q ss_pred             HHHHHHHHHHH-------HcCccccCCCCCCeEEccC-CcEEEEecccccccchhhHHh
Q 013370           45 KGVEATLVQLL-------ETGILHADPHPGNLRYTSS-GQIGFLDFGLLCRMERKHQFA   95 (444)
Q Consensus        45 ~gv~a~L~QLl-------~~GfFHADPHPGNILv~~D-GrLvlLDFGmv~~L~~~~R~~   95 (444)
                      ..|++|.+|||       ..|++|||++|.||||.+. .-|.++|||..+..++.+-.-
T Consensus       536 kaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~eneitP  594 (752)
T KOG0670|consen  536 KAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASFASENEITP  594 (752)
T ss_pred             hHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCccccccccccccH
Confidence            34566666665       5699999999999999976 468899999999988865443

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=97.00  E-value=0.00076  Score=67.81  Aligned_cols=91  Identities=19%  Similarity=0.206  Sum_probs=59.2

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcC
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMD  119 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG  119 (444)
                      ..++..++.+ +..++..|++|+|++|.||+++++|++.++|||.+..+........ .      ...| ...+.+....
T Consensus       121 ~~~~~ql~~a-L~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~-~------~~~y-~aPE~~~~~~  191 (343)
T cd07851         121 QFLVYQILRG-LKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDEMTGYV-A------TRWY-RAPEIMLNWM  191 (343)
T ss_pred             HHHHHHHHHH-HHHHHHCCeecCCCCHHHeEECCCCCEEEccccccccccccccCCc-c------cccc-cCHHHHhCCC
Confidence            3456666665 6789999999999999999999999999999999987755422110 0      0111 1233333222


Q ss_pred             CCCCCCChHHHHHHHHHHHh
Q 013370          120 VVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus       120 ~l~~~~d~~~~~~~L~~~l~  139 (444)
                      ......|+..+.--+..++.
T Consensus       192 ~~~~~~DvwslGv~l~ellt  211 (343)
T cd07851         192 HYNQTVDIWSVGCIMAELLT  211 (343)
T ss_pred             CCCchHhHHHHHHHHHHHHh
Confidence            33445677777655555543

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=96.97  E-value=0.0013  Score=63.08  Aligned_cols=36  Identities=28%  Similarity=0.352  Sum_probs=28.8

Q ss_pred             HcCccccCCCCCCeEEccCCcEEEEecccccccchh
Q 013370           56 ETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        56 ~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~   91 (444)
                      ..+++|+|.||||++++.++-.++||||.++.=++.
T Consensus       163 ~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~gDp~  198 (235)
T cd05155         163 PPVWFHGDLAPGNLLVQDGRLSAVIDFGCLGVGDPA  198 (235)
T ss_pred             CceEEeCCCCCCcEEEECCCEEEEEeCcccCcCChH
Confidence            456999999999999986544579999997665553

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=96.96  E-value=0.00084  Score=73.51  Aligned_cols=82  Identities=20%  Similarity=0.318  Sum_probs=59.5

Q ss_pred             CCCcCCCCcccHHhhc-CCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLS-TGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~-~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      .|||.|+.+..+.-.. .++.        +.       .+.-++....++ |.-||...++|+|++.|||+++-||.+-+
T Consensus       108 iEFC~GGAVDaimlEL~r~Lt--------E~-------QIqvvc~q~ldA-Ln~LHs~~iIHRDLKAGNiL~TldGdirL  171 (1187)
T KOG0579|consen  108 IEFCGGGAVDAIMLELGRVLT--------ED-------QIQVVCYQVLDA-LNWLHSQNIIHRDLKAGNILLTLDGDIRL  171 (1187)
T ss_pred             EeecCCchHhHHHHHhccccc--------hH-------HHHHHHHHHHHH-HHHHhhcchhhhhccccceEEEecCcEee
Confidence            3899999888776432 2222        11       122355555555 78899999999999999999999999999


Q ss_pred             Eecccccccch--hhHHhHHH
Q 013370           80 LDFGLLCRMER--KHQFAMLA   98 (444)
Q Consensus        80 LDFGmv~~L~~--~~R~~l~~   98 (444)
                      .|||.......  ..|..|++
T Consensus       172 ADFGVSAKn~~t~qkRDsFIG  192 (1187)
T KOG0579|consen  172 ADFGVSAKNKSTRQKRDSFIG  192 (1187)
T ss_pred             ecccccccchhHHhhhccccC
Confidence            99999876654  34555554

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=96.94  E-value=0.0015  Score=67.11  Aligned_cols=91  Identities=21%  Similarity=0.230  Sum_probs=62.7

Q ss_pred             HHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCC
Q 013370           42 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVV  121 (444)
Q Consensus        42 La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l  121 (444)
                      |..+++.. ++.||..+++|+|++|.|++.+.+|.|.+.|||+...+.... ..|..+++    -=|.+..+.+...-..
T Consensus       182 L~~QlL~g-lk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~-k~~T~lVV----TLWYRaPELLLG~~ty  255 (419)
T KOG0663|consen  182 LMLQLLRG-LKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPL-KPYTPLVV----TLWYRAPELLLGAKTY  255 (419)
T ss_pred             HHHHHHHH-HHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCc-ccCcceEE----EeeecCHHHhcCCccc
Confidence            44444433 777899999999999999999999999999999999987652 22322222    2245567777655555


Q ss_pred             CCCCChHHHHHHHHHHH
Q 013370          122 RPGTNTLRVTMDLEDAL  138 (444)
Q Consensus       122 ~~~~d~~~~~~~L~~~l  138 (444)
                      ...+|++.+.=-+..++
T Consensus       256 st~iDMWSvGCI~aE~l  272 (419)
T KOG0663|consen  256 STAVDMWSVGCIFAELL  272 (419)
T ss_pred             CcchhhhhHHHHHHHHH
Confidence            56678886644444433

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=96.92  E-value=0.00096  Score=64.51  Aligned_cols=48  Identities=31%  Similarity=0.479  Sum_probs=38.4

Q ss_pred             HHHHHHHHHHHHHHHH-cCccccCCCCCCeEEccCCcEEEEecccccccc
Q 013370           41 DLVNKGVEATLVQLLE-TGILHADPHPGNLRYTSSGQIGFLDFGLLCRME   89 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~-~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~   89 (444)
                      .++..++.+ +..++. .|++|+|++|.||+++.+|.+.+.|||+...+.
T Consensus       111 ~i~~~i~~~-l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~  159 (288)
T cd06616         111 KIAVATVKA-LNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLV  159 (288)
T ss_pred             HHHHHHHHH-HHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence            444444444 567776 499999999999999999999999999876554

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=96.90  E-value=0.00055  Score=67.47  Aligned_cols=35  Identities=26%  Similarity=0.477  Sum_probs=30.2

Q ss_pred             HcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           56 ETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        56 ~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      ..|++|+|+||||+++++++..++|||+.++.=++
T Consensus       174 ~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~g~~  208 (296)
T cd05153         174 PRGVIHADLFRDNVLFDGDELSGVIDFYFACTDAF  208 (296)
T ss_pred             CCcCCccCcCcccEEEeCCceEEEeehhhhcCchH
Confidence            46899999999999999987789999999876443

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=96.89  E-value=0.00085  Score=64.89  Aligned_cols=33  Identities=27%  Similarity=0.343  Sum_probs=28.6

Q ss_pred             cCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           57 TGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        57 ~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      ..+.|+|.||||++++++| +++|||+.++.=++
T Consensus       153 ~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~~Gdp  185 (226)
T TIGR02172       153 STCLHGDFQIGNLITSGKG-TYWIDLGDFGYGNP  185 (226)
T ss_pred             CceEecCCCCCcEEEcCCC-cEEEechhcCcCCH
Confidence            4678999999999999988 99999999875444

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PRK05231 homoserine kinase; Provisional

Probab=96.88  E-value=0.00061  Score=68.10  Aligned_cols=36  Identities=31%  Similarity=0.587  Sum_probs=29.3

Q ss_pred             HHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           55 LETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        55 l~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      +..|++|+|+||+|+++..++-.++|||+.++.=..
T Consensus       185 lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~~~~  220 (319)
T PRK05231        185 LPRGVIHADLFRDNVLFEGDRLSGFIDFYFACNDKL  220 (319)
T ss_pred             CCcccCCCCCCCCcEEEECCceEEEEecccccCCch
Confidence            345999999999999998554458999999876544

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=96.88  E-value=0.00056  Score=69.61  Aligned_cols=84  Identities=19%  Similarity=0.291  Sum_probs=65.3

Q ss_pred             HHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCCh
Q 013370           48 EATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNT  127 (444)
Q Consensus        48 ~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~  127 (444)
                      -|..+.++..|+.|+|++|.||.+..++.+.++|||....-...++..  .    .+-..|....+++..+| ..+.+|+
T Consensus       128 ~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~mt--p----yVvtRyyrapevil~~~-~ke~vdi  200 (369)
T KOG0665|consen  128 LCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDFMMT--P----YVVTRYYRAPEVILGMG-YKENVDI  200 (369)
T ss_pred             HHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCcccccC--c----hhheeeccCchheeccC-Ccccchh
Confidence            355778899999999999999999999999999999988766653322  1    12245667799999999 7788999


Q ss_pred             HHHHHHHHHHH
Q 013370          128 LRVTMDLEDAL  138 (444)
Q Consensus       128 ~~~~~~L~~~l  138 (444)
                      +.+.-.+.+++
T Consensus       201 wSvGci~gEli  211 (369)
T KOG0665|consen  201 WSVGCIMGELI  211 (369)
T ss_pred             hhhhhHHHHHh
Confidence            97765555544

>PRK10271 thiK thiamine kinase; Provisional

Probab=96.82  E-value=0.00083  Score=63.81  Aligned_cols=34  Identities=29%  Similarity=0.424  Sum_probs=30.0

Q ss_pred             CccccCCCCCCeEEccCCcEEEEecccccccchhh
Q 013370           58 GILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKH   92 (444)
Q Consensus        58 GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~   92 (444)
                      -..|+|+||||++++++| +.+|||+..+.-++..
T Consensus        78 ~p~H~D~~~~N~~~~~~~-~~lIDwe~a~~gDp~~  111 (188)
T PRK10271         78 APLHMDVHAGNLVHSASG-LRLIDWEYAGDGDIAL  111 (188)
T ss_pred             eeecCCCCCccEEEECCC-EEEEeCCcccCCCHHH
Confidence            569999999999998877 9999999999888753

>PRK11768 serine/threonine protein kinase; Provisional

Probab=96.79  E-value=0.0014  Score=66.56  Aligned_cols=33  Identities=27%  Similarity=0.307  Sum_probs=27.5

Q ss_pred             HcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           56 ETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        56 ~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      ..|++|+|+||||++++ | .+.+||||.++.=+.
T Consensus       195 ~~~liHgD~h~~NvL~~-d-~~~iIDFDd~~~g~~  227 (325)
T PRK11768        195 RLLRLHGDCHPGNILWR-D-GPHFVDLDDARMGPA  227 (325)
T ss_pred             CccceecCCCchhcccc-C-CcEEEeCCCCCCCCH
Confidence            45899999999999994 5 689999999985433

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=96.78  E-value=0.0017  Score=65.06  Aligned_cols=49  Identities=20%  Similarity=0.350  Sum_probs=41.0

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      .++..++.+ +..+|..|++|+|++|.|++++.+|.+.++|||.....+.
T Consensus       112 ~~~~ql~~a-L~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~  160 (328)
T cd07856         112 YFLYQILRG-LKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDP  160 (328)
T ss_pred             HHHHHHHHH-HHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCC
Confidence            345555554 6889999999999999999999999999999999876544

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=96.74  E-value=0.0059  Score=65.68  Aligned_cols=90  Identities=16%  Similarity=0.211  Sum_probs=64.8

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhhHH-hHHHHHHHHHhCCHHHH-HHHHHhc
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQF-AMLASIVHIVNGDWQSL-VHSLTEM  118 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~-~l~~ll~alv~~D~~~l-a~~l~~l  118 (444)
                      ++.-.+|--.+..||..|++.+|++|.|++++.+|-+.+.|||..+.+....+. +||        +.++-+ .+.+..-
T Consensus       523 rF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTwTFc--------GTpEYVAPEIILnK  594 (732)
T KOG0614|consen  523 RFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTWTFC--------GTPEYVAPEIILNK  594 (732)
T ss_pred             hhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccCCceeeec--------CCcccccchhhhcc
Confidence            455555555588999999999999999999999999999999999999776553 333        334444 3555555


Q ss_pred             CCCCCCCChHHHHHHHHHHHh
Q 013370          119 DVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus       119 G~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |. +..+|.+++.--+.+++.
T Consensus       595 GH-D~avDyWaLGIli~ELL~  614 (732)
T KOG0614|consen  595 GH-DRAVDYWALGILIYELLT  614 (732)
T ss_pred             Cc-chhhHHHHHHHHHHHHHc
Confidence            43 344677777665666553

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=96.72  E-value=0.0016  Score=62.37  Aligned_cols=35  Identities=34%  Similarity=0.538  Sum_probs=30.4

Q ss_pred             HHHHHHcCccccCCCCCCeEEccCC-c--EEEEecccc
Q 013370           51 LVQLLETGILHADPHPGNLRYTSSG-Q--IGFLDFGLL   85 (444)
Q Consensus        51 L~QLl~~GfFHADPHPGNILv~~DG-r--LvlLDFGmv   85 (444)
                      +.-||..+++|+|+--.||++.++| +  +.+||||+-
T Consensus       126 igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls  163 (229)
T KOG3087|consen  126 IGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLS  163 (229)
T ss_pred             HHHhhhCCeecccccccceEEecCCCcCceEEEeecch
Confidence            5567999999999999999999886 4  489999974

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=96.67  E-value=0.0026  Score=71.74  Aligned_cols=78  Identities=23%  Similarity=0.437  Sum_probs=58.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      ||||.|++++|+..=-.|            ++.+..  ...-..+..-..+..|+..-++|+|.+--||+.+.+|++.++
T Consensus       100 MEfC~gGSVTDLVKn~~g------------~rl~E~--~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLv  165 (953)
T KOG0587|consen  100 MEFCGGGSVTDLVKNTKG------------NRLKEE--WIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLV  165 (953)
T ss_pred             eeccCCccHHHHHhhhcc------------cchhhH--HHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEe
Confidence            999999999999752212            222211  112233344445788899999999999999999999999999


Q ss_pred             ecccccccchhh
Q 013370           81 DFGLLCRMERKH   92 (444)
Q Consensus        81 DFGmv~~L~~~~   92 (444)
                      |||.-.+++...
T Consensus       166 DFGvSaQldsT~  177 (953)
T KOG0587|consen  166 DFGVSAQLDSTV  177 (953)
T ss_pred             eeeeeeeeeccc
Confidence            999999998753

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=96.67  E-value=0.0023  Score=66.02  Aligned_cols=94  Identities=15%  Similarity=0.207  Sum_probs=68.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      ||.|+|.|+..+..+..                 ++    .+...++ ++..-|-.+|++|||-+-=||++..|+++++|
T Consensus       187 melv~g~Pl~~v~~v~d-----------------~~----~ly~~lm-~~Iv~la~~GlIHgDFNEFNimv~dd~~i~vI  244 (465)
T KOG2268|consen  187 MELVDGYPLRQVRHVED-----------------PP----TLYDDLM-GLIVRLANHGLIHGDFNEFNIMVKDDDKIVVI  244 (465)
T ss_pred             HHhhcccceeeeeecCC-----------------hH----HHHHHHH-HHHHHHHHcCceecccchheeEEecCCCEEEe
Confidence            89999999988765431                 11    2333332 34566789999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHh-cCCCCC
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTE-MDVVRP  123 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~-lG~l~~  123 (444)
                      ||=.|...+...-+-|.       .+|.+.+.+-|.+ .|+-++
T Consensus       245 DFPQmvS~sh~nA~~YF-------dRDv~Ci~~fFrKkf~YE~e  281 (465)
T KOG2268|consen  245 DFPQMVSTSHPNAEYYF-------DRDVECIRAFFRKKFGYEPE  281 (465)
T ss_pred             echHhhccCCCccceee-------cccHHHHHHHHHHhcCCCCC
Confidence            99999888876544443       4888777777653 455444

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=96.66  E-value=0.0026  Score=63.46  Aligned_cols=36  Identities=22%  Similarity=0.446  Sum_probs=30.4

Q ss_pred             cCccccCCCCCCeEEccCCcE-EEEecccccccchhh
Q 013370           57 TGILHADPHPGNLRYTSSGQI-GFLDFGLLCRMERKH   92 (444)
Q Consensus        57 ~GfFHADPHPGNILv~~DGrL-vlLDFGmv~~L~~~~   92 (444)
                      ..++|+|+||||++++++|++ ++||||+++-=++..
T Consensus       185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iGDPa~  221 (276)
T cd05152         185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKVGDPAR  221 (276)
T ss_pred             CeeEeCCCCCCcEEEeCCCCEEEEECcHhcccCCHHH
Confidence            468999999999999987775 699999988777643

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=96.66  E-value=0.00082  Score=67.20  Aligned_cols=36  Identities=28%  Similarity=0.544  Sum_probs=33.0

Q ss_pred             HcCccccCCCCCCeEEccCCcEEEEecccccccchh
Q 013370           56 ETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        56 ~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~   91 (444)
                      +..++|+|.+|.||+++..|.+.++|||++|+|-+.
T Consensus       186 ~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S  221 (361)
T KOG1006|consen  186 ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS  221 (361)
T ss_pred             HhhhhhccCChhheEEecCCCEeeecccchHhHHHH
Confidence            468999999999999999999999999999998554

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=96.64  E-value=0.002  Score=62.83  Aligned_cols=49  Identities=22%  Similarity=0.298  Sum_probs=40.8

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEcc----CCcEEEEecccccccch
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTS----SGQIGFLDFGLLCRMER   90 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~----DGrLvlLDFGmv~~L~~   90 (444)
                      .++..++.+ +..+|..|++|+|++|.||+++.    +|.+.+.|||....+..
T Consensus       112 ~i~~qi~~~-l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~  164 (316)
T cd07842         112 SLLWQILNG-VHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNA  164 (316)
T ss_pred             HHHHHHHHH-HHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCC
Confidence            444444444 77889999999999999999999    89999999998877644

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=96.63  E-value=0.0013  Score=67.33  Aligned_cols=155  Identities=19%  Similarity=0.178  Sum_probs=93.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|---++...+.+.+       +         .++--.-+-+.|..||..+++.+|++-.|++++.||.+.+-
T Consensus       247 MeyanGGeLf~HLsrer~FsE~-------R---------tRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKit  310 (516)
T KOG0690|consen  247 MEYANGGELFFHLSRERVFSED-------R---------TRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKIT  310 (516)
T ss_pred             EEEccCceEeeehhhhhcccch-------h---------hhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEee
Confidence            8999999887666554443310       1         12222223345788999999999999999999999999999


Q ss_pred             ecccccc-cch-hhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHhchhccCCCCcccHHHHHHH
Q 013370           81 DFGLLCR-MER-KHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGK  158 (444)
Q Consensus        81 DFGmv~~-L~~-~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~~~~~~~~l~~~~f~~ll~~  158 (444)
                      |||+|++ ++. ..-..+        ++.++-++-...+---....+|-+.+.-.+.+++..-.   +..+    +--++
T Consensus       311 DFGLCKE~I~~g~t~kTF--------CGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRL---PFyn----~dh~k  375 (516)
T KOG0690|consen  311 DFGLCKEEIKYGDTTKTF--------CGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRL---PFYN----KDHEK  375 (516)
T ss_pred             ecccchhcccccceeccc--------cCChhhcCchhhccccccceeehhhhhHHHHHHHhccC---cccc----cchhH
Confidence            9999984 222 122223        34455444333222222334565655555666654321   1111    12345


Q ss_pred             HHHHHHhCCcCCChHHHHHHHHHHHHHHHh
Q 013370          159 IWSIALKYHFRMPPYYTLVLRSLASLEGLA  188 (444)
Q Consensus       159 l~~l~~~~~~~vP~~~~li~Ral~~LEGla  188 (444)
                      ++++...-.+++|..+.-=.|+++.  |+.
T Consensus       376 LFeLIl~ed~kFPr~ls~eAktLLs--GLL  403 (516)
T KOG0690|consen  376 LFELILMEDLKFPRTLSPEAKTLLS--GLL  403 (516)
T ss_pred             HHHHHHhhhccCCccCCHHHHHHHH--HHh
Confidence            6666666667788777666666543  554

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=96.61  E-value=0.0063  Score=64.65  Aligned_cols=92  Identities=14%  Similarity=0.184  Sum_probs=66.1

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCC
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDV  120 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~  120 (444)
                      .+-..-+.|.|+.|+..+++.+|++|.||++++.|.+-+-|.|+..++++..+..=.-       +...-+|--+..-+.
T Consensus       290 ~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~~~rv-------GT~GYMAPEvl~ne~  362 (591)
T KOG0986|consen  290 RFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPIRGRV-------GTVGYMAPEVLQNEV  362 (591)
T ss_pred             HHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCCCCcccccc-------CcccccCHHHHcCCc
Confidence            3455567789999999999999999999999999999999999999999876543210       122223333334455


Q ss_pred             CCCCCChHHHHHHHHHHHh
Q 013370          121 VRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus       121 l~~~~d~~~~~~~L~~~l~  139 (444)
                      .+-.+|-..+.=-+..++.
T Consensus       363 Y~~s~Dwf~lGCllYemi~  381 (591)
T KOG0986|consen  363 YDFSPDWFSLGCLLYEMIA  381 (591)
T ss_pred             ccCCccHHHHHhHHHHHHc
Confidence            5556676666555666654

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=96.60  E-value=0.0022  Score=65.96  Aligned_cols=29  Identities=34%  Similarity=0.645  Sum_probs=27.1

Q ss_pred             ccccCCCCCCeEEccCCc-EEEEecccccc
Q 013370           59 ILHADPHPGNLRYTSSGQ-IGFLDFGLLCR   87 (444)
Q Consensus        59 fFHADPHPGNILv~~DGr-LvlLDFGmv~~   87 (444)
                      .+|||+||+|+++++++. .+++|||-++.
T Consensus       199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa~~  228 (331)
T COG2334         199 IIHGDLHPDNVLFDDDTDVSGFIDFDDAGY  228 (331)
T ss_pred             eeecCCCccceeEcCCCCeeeEEEcccccc
Confidence            999999999999999886 99999999875

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=96.58  E-value=0.0014  Score=65.53  Aligned_cols=35  Identities=31%  Similarity=0.642  Sum_probs=30.4

Q ss_pred             HcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           56 ETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        56 ~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      ..|++|+|.||||+++++++..++|||+.++.=++
T Consensus       186 ~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~~~~  220 (307)
T TIGR00938       186 PRGVIHADLFPDNVLFDGDSVKGVIDFYFACTDAR  220 (307)
T ss_pred             CCccCCCCCCcCcEEEECCceEEEeecccccCcch
Confidence            36999999999999999988779999999875443

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=96.55  E-value=0.0031  Score=65.98  Aligned_cols=46  Identities=33%  Similarity=0.539  Sum_probs=37.4

Q ss_pred             HHHHHHHHHHHHHcCccccCCCCCCeEEcc-CCcEEEEecccccccch
Q 013370           44 NKGVEATLVQLLETGILHADPHPGNLRYTS-SGQIGFLDFGLLCRMER   90 (444)
Q Consensus        44 ~~gv~a~L~QLl~~GfFHADPHPGNILv~~-DGrLvlLDFGmv~~L~~   90 (444)
                      ..+..+ +.+++..|++|+|.+|||+++.+ .|+-+++|||+.-..+.
T Consensus       139 ~~ll~A-l~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~  185 (418)
T KOG1167|consen  139 RNLLKA-LAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDG  185 (418)
T ss_pred             HHHHHH-hhhhhccCccccCCCccccccccccCCceEEechhHHHHHh
Confidence            344444 67789999999999999999986 58999999999876433

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=96.53  E-value=0.0046  Score=57.22  Aligned_cols=78  Identities=27%  Similarity=0.397  Sum_probs=52.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCC-cEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG-QIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DG-rLvl   79 (444)
                      |||++|..+.++..... ..    .......       ...+...++.. +..+|..|++|+|.+|.|++++..+ .+.+
T Consensus        77 ~~~~~~~~l~~~~~~~~-~~----~~~~~~~-------~~~~~~~~~~~-l~~~H~~~~~hrd~kp~nil~~~~~~~~~l  143 (384)
T COG0515          77 MEYVDGGSLEDLLKKIG-RK----GPLSESE-------ALFILAQILSA-LEYLHSKGIIHRDIKPENILLDRDGRVVKL  143 (384)
T ss_pred             EecCCCCcHHHHHHhcc-cc----cCCCHHH-------HHHHHHHHHHH-HHHHHhCCeeccCCCHHHeeecCCCCeEEE
Confidence            68899999885554321 00    0011111       12333333333 6689999999999999999999998 7999


Q ss_pred             Eecccccccchh
Q 013370           80 LDFGLLCRMERK   91 (444)
Q Consensus        80 LDFGmv~~L~~~   91 (444)
                      +|||....++..
T Consensus       144 ~dfg~~~~~~~~  155 (384)
T COG0515         144 IDFGLAKLLPDP  155 (384)
T ss_pred             eccCcceecCCC
Confidence            999998855543

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=96.52  E-value=0.0026  Score=63.38  Aligned_cols=50  Identities=26%  Similarity=0.398  Sum_probs=42.0

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      +++++ ++-..+..+|...+.|+|.+|.|++++.||-+++-|||....++.
T Consensus       127 kk~Mk-~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs~  176 (376)
T KOG0669|consen  127 KKVMK-GLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAFST  176 (376)
T ss_pred             HHHHH-HHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccceec
Confidence            34443 444558889999999999999999999999999999999977764

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=96.41  E-value=0.002  Score=63.91  Aligned_cols=36  Identities=19%  Similarity=0.251  Sum_probs=31.5

Q ss_pred             HcCccccCCCCCCeEEccC----CcEEEEecccccccchh
Q 013370           56 ETGILHADPHPGNLRYTSS----GQIGFLDFGLLCRMERK   91 (444)
Q Consensus        56 ~~GfFHADPHPGNILv~~D----GrLvlLDFGmv~~L~~~   91 (444)
                      ..++.|+|+|||||+++++    +++.+|||..++.-++.
T Consensus       178 ~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~~p~  217 (302)
T cd05156         178 PVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYNYRG  217 (302)
T ss_pred             CceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCCCcH
Confidence            3578999999999999985    89999999999876664

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=96.38  E-value=0.0046  Score=67.43  Aligned_cols=72  Identities=21%  Similarity=0.329  Sum_probs=57.4

Q ss_pred             CCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEe
Q 013370            2 EWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLD   81 (444)
Q Consensus         2 EwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLD   81 (444)
                      -|++|-+|...+..             ++.+.+... +.++++...+. +..||.-+++|.|++--|||+..||++++-|
T Consensus       467 qwCeGsSLY~hlHv-------------~etkfdm~~-~idIAqQiaqG-M~YLHAK~IIHrDLKSnNIFl~~~~kVkIgD  531 (678)
T KOG0193|consen  467 QWCEGSSLYTHLHV-------------QETKFDMNT-TIDIAQQIAQG-MDYLHAKNIIHRDLKSNNIFLHEDLKVKIGD  531 (678)
T ss_pred             hhccCchhhhhccc-------------hhhhhhHHH-HHHHHHHHHHh-hhhhhhhhhhhhhccccceEEccCCcEEEec
Confidence            48889888877654             345555543 34677777666 7789999999999999999999999999999


Q ss_pred             ccccccc
Q 013370           82 FGLLCRM   88 (444)
Q Consensus        82 FGmv~~L   88 (444)
                      ||+...-
T Consensus       532 FGLatvk  538 (678)
T KOG0193|consen  532 FGLATVK  538 (678)
T ss_pred             ccceeee
Confidence            9997643

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=96.35  E-value=0.0022  Score=60.96  Aligned_cols=34  Identities=24%  Similarity=0.372  Sum_probs=29.7

Q ss_pred             cCccccCCCCCCeEEcc-CCcEEEEecccccccch
Q 013370           57 TGILHADPHPGNLRYTS-SGQIGFLDFGLLCRMER   90 (444)
Q Consensus        57 ~GfFHADPHPGNILv~~-DGrLvlLDFGmv~~L~~   90 (444)
                      .++.|+|+|||||++++ ++.+.+|||-.++.-++
T Consensus       170 ~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~~~~  204 (235)
T cd05157         170 IVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGYNYR  204 (235)
T ss_pred             EEEEcCCCCcCcEEEeCCCCCEEEEEcccCCcCch
Confidence            47999999999999998 68999999988776555

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>TIGR02721 ycfN_thiK thiamine kinase

Probab=96.33  E-value=0.011  Score=57.28  Aligned_cols=34  Identities=26%  Similarity=0.340  Sum_probs=29.8

Q ss_pred             cCccccCCCCCCeEEccCCcEEEEecccccccchh
Q 013370           57 TGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        57 ~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~   91 (444)
                      ..+.|+|+||||++++++| +.+|||..++.=++.
T Consensus       146 ~~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~~gdp~  179 (256)
T TIGR02721       146 LAPLHMDVHAYNLVVTPQG-LKLIDWEYASDGDIA  179 (256)
T ss_pred             CeeecCCCCcCcEEEeCCC-CEEEeccccCcCCHH
Confidence            3699999999999999887 899999998876664

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=96.32  E-value=0.0094  Score=58.89  Aligned_cols=49  Identities=22%  Similarity=0.366  Sum_probs=43.7

Q ss_pred             HHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHH
Q 013370           51 LVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLAS   99 (444)
Q Consensus        51 L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~l   99 (444)
                      +...+.-+++|+|.+|.|++...+|.+.+-|||--..-+...|..+|..
T Consensus       137 l~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~tlcgt  185 (281)
T KOG0580|consen  137 LLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRKTLCGT  185 (281)
T ss_pred             HHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecCCCCceeeecc
Confidence            3344889999999999999999999999999999998888888888875

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=96.31  E-value=0.0023  Score=65.48  Aligned_cols=36  Identities=28%  Similarity=0.398  Sum_probs=32.4

Q ss_pred             cCccccCCCCCCeEEccCCcEEEEecccccccchhh
Q 013370           57 TGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKH   92 (444)
Q Consensus        57 ~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~   92 (444)
                      ..++|+|.|+||+++++++.+++|||++++-=+|..
T Consensus       198 ~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGDP~~  233 (321)
T COG3173         198 PVLVHGDYRPGNLIIDPGRPTGVLDWELATLGDPLE  233 (321)
T ss_pred             ceeeeCCcccCCEEEeCCCeeEEEeccccccCCcHH
Confidence            479999999999999999999999999998777744

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=96.29  E-value=0.012  Score=58.13  Aligned_cols=114  Identities=14%  Similarity=0.283  Sum_probs=73.2

Q ss_pred             HHcCccccCCCCCCeEEccC-CcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHH
Q 013370           55 LETGILHADPHPGNLRYTSS-GQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMD  133 (444)
Q Consensus        55 l~~GfFHADPHPGNILv~~D-GrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~  133 (444)
                      +.-|++|+|.+|-|++++.. .+|-+||||+.--.-+..-....     +. ..|-+=.+.+++.-..+-..|.+.+.-.
T Consensus       149 HS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnVR-----VA-SRyfKGPELLVdy~~YDYSLD~WS~Gcm  222 (338)
T KOG0668|consen  149 HSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR-----VA-SRYFKGPELLVDYQMYDYSLDMWSLGCM  222 (338)
T ss_pred             HhcCcccccCCcceeeechhhceeeeeecchHhhcCCCceeeee-----ee-hhhcCCchheeechhccccHHHHHHHHH
Confidence            55699999999999999965 58999999998777665444322     11 2232335666666666777888888766


Q ss_pred             HHHHHhc--hhccCCCCcccHHHH--------HHHHHHHHHhCCcCCChHHHHH
Q 013370          134 LEDALGE--VEFKDGIPDVKFSRV--------LGKIWSIALKYHFRMPPYYTLV  177 (444)
Q Consensus       134 L~~~l~~--~~~~~~l~~~~f~~l--------l~~l~~l~~~~~~~vP~~~~li  177 (444)
                      ++.++-.  ..|. +  .-|..++        ++++..-..+|.+.+||.|--+
T Consensus       223 lA~miFrkepFFh-G--~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i  273 (338)
T KOG0668|consen  223 LASMIFRKEPFFH-G--HDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDI  273 (338)
T ss_pred             HHHHHhccCcccC-C--CCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhH
Confidence            6665421  1111 1  1233332        3456666777887777776543

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=96.28  E-value=0.0065  Score=63.49  Aligned_cols=49  Identities=16%  Similarity=0.211  Sum_probs=41.1

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccc
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME   89 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~   89 (444)
                      ..++..++.+ +..+|..|++|+|++|.||+++.++.+.+.|||+...+.
T Consensus       242 ~~~~~qi~~a-L~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~  290 (401)
T cd05107         242 VGFSYQVANG-MEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIM  290 (401)
T ss_pred             HHHHHHHHHH-HHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceecc
Confidence            3455555554 688999999999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=96.21  E-value=0.004  Score=59.31  Aligned_cols=47  Identities=30%  Similarity=0.456  Sum_probs=38.2

Q ss_pred             HHHHHHHHHH-------HHcCccccCCCCCCeEEccCCcEEEEecccccccchh
Q 013370           45 KGVEATLVQL-------LETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        45 ~gv~a~L~QL-------l~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~   91 (444)
                      ..+++++-|+       +.+.+.|+|++|.|+++..+|.+.+.|||+...+.-.
T Consensus       101 ~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgip  154 (292)
T KOG0662|consen  101 EIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIP  154 (292)
T ss_pred             HHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCc
Confidence            3455666665       4578899999999999999999999999998766544

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=96.11  E-value=0.0096  Score=58.88  Aligned_cols=30  Identities=20%  Similarity=0.274  Sum_probs=26.8

Q ss_pred             cCccccCCCCCCeEEccCCcEEEEecccccc
Q 013370           57 TGILHADPHPGNLRYTSSGQIGFLDFGLLCR   87 (444)
Q Consensus        57 ~GfFHADPHPGNILv~~DGrLvlLDFGmv~~   87 (444)
                      .|+.|+|+|++|++++. |.+.+|||+-++.
T Consensus       187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~~  216 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCTI  216 (313)
T ss_pred             CceEcCCCCcccEEEeC-CcEEEEECccccc
Confidence            68999999999999987 7899999997654

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=95.95  E-value=0.0083  Score=64.11  Aligned_cols=134  Identities=19%  Similarity=0.202  Sum_probs=83.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+.-++|.|.+....|..            ++ ..++.+++..+. ..+..|-..+++|+|+-.-||||+.++.+.+-
T Consensus       280 tE~m~~GsLl~yLr~~~~~~------------l~-~~~Ll~~a~qIa-eGM~YLes~~~IHRDLAARNiLV~~~~~vKIs  345 (468)
T KOG0197|consen  280 TEYMPKGSLLDYLRTREGGL------------LN-LPQLLDFAAQIA-EGMAYLESKNYIHRDLAARNILVDEDLVVKIS  345 (468)
T ss_pred             EEecccCcHHHHhhhcCCCc------------cc-hHHHHHHHHHHH-HHHHHHHhCCccchhhhhhheeeccCceEEEc
Confidence            79999999999987532211            11 112334444433 34777888999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCC----HHHHHHHHHhcCCCCCCCChHHHHHHHHHHHhchhccCCCCcccHHHHH
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGD----WQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVL  156 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D----~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~~~~~~~~l~~~~f~~ll  156 (444)
                      ||||.+.+.++.... ..      .++    | ...|++.. |-..-..|++.|..-|-+++..  ...+.++++-.+++
T Consensus       346 DFGLAr~~~d~~Y~~-~~------~~kfPIkW-tAPEa~~~-~~FS~kSDVWSFGVlL~E~fT~--G~~py~~msn~ev~  414 (468)
T KOG0197|consen  346 DFGLARLIGDDEYTA-SE------GGKFPIKW-TAPEALNY-GKFSSKSDVWSFGVLLWELFTY--GRVPYPGMSNEEVL  414 (468)
T ss_pred             ccccccccCCCceee-cC------CCCCCcee-cCHHHHhh-CCcccccceeehhhhHHHHhcc--CCCCCCCCCHHHHH
Confidence            999999655543221 00      011    1 12445443 3344456888877666666543  12344566666665


Q ss_pred             HHH
Q 013370          157 GKI  159 (444)
Q Consensus       157 ~~l  159 (444)
                      +.+
T Consensus       415 ~~l  417 (468)
T KOG0197|consen  415 ELL  417 (468)
T ss_pred             HHH
Confidence            544

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=95.94  E-value=0.02  Score=62.43  Aligned_cols=115  Identities=14%  Similarity=0.159  Sum_probs=81.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+.-+.|.+++....-+        +++.-.+|        .+++...+..||.|.++|+|++.-||||+.+.-+.+.
T Consensus       191 MEfCa~GqL~~VLka~~~i--------tp~llv~W--------sk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIs  254 (904)
T KOG4721|consen  191 MEFCAQGQLYEVLKAGRPI--------TPSLLVDW--------SKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKIS  254 (904)
T ss_pred             eeccccccHHHHHhccCcc--------CHHHHHHH--------HHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEec
Confidence            9999999999998653222        22333332        2445556888999999999999999999999999999


Q ss_pred             ecccccccchh-hHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERK-HQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~-~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||--.++++. ++-.|+..        ..-+|-.+++---..+.+|++.|.-.|=+++.
T Consensus       255 DFGTS~e~~~~STkMSFaGT--------VaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT  306 (904)
T KOG4721|consen  255 DFGTSKELSDKSTKMSFAGT--------VAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLT  306 (904)
T ss_pred             cccchHhhhhhhhhhhhhhh--------HhhhCHHHhhcCCcccccceehhHHHHHHHHh
Confidence            99999988774 33333332        23344444555566677888888766655553

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=95.80  E-value=0.018  Score=66.75  Aligned_cols=171  Identities=17%  Similarity=0.162  Sum_probs=99.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      +||++|+.|..++.-...-+      +. ...+. -+++..++... ...++.|.+.+|||+|+-.-|.|++....+.+.
T Consensus       774 leyM~gGDL~sflr~~r~~~------~~-~~~L~-~~dLl~~a~dv-A~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIa  844 (1025)
T KOG1095|consen  774 LEYMEGGDLLSFLRESRPAP------FQ-PSNLS-MRDLLAFALDV-AKGMNYLESKHFVHRDLAARNCLLDERRVVKIA  844 (1025)
T ss_pred             ehhcccCcHHHHHHhccccc------CC-CCCCC-HHHHHHHHHHH-hhhhHHHHhCCCcCcchhhhheeecccCcEEEc
Confidence            69999999999887542111      00 01111 12344444332 345788999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHhchhccCCCCcccHHHHHHHHH
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIW  160 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~~~~~~~~l~~~~f~~ll~~l~  160 (444)
                      ||||...+-..+.+..-.  .|+.==.|. ..|++.+ |.....+|++.|.--+=++|.--  ..+.++.+=.+++..  
T Consensus       845 DFGlArDiy~~~yyr~~~--~a~lPvkWm-~PEsl~d-~iFtskSDvWsFGVllWEifslG--~~PY~~~~n~~v~~~--  916 (1025)
T KOG1095|consen  845 DFGLARDIYDKDYYRKHG--EAMLPVKWM-PPESLKD-GIFTSKSDVWSFGVLLWEIFSLG--ATPYPSRSNFEVLLD--  916 (1025)
T ss_pred             ccchhHhhhhchheeccC--ccccceecC-CHHHHhh-cccccccchhhhHHHHHHHHhCC--CCCCCCcchHHHHHH--
Confidence            999998554432221000  000000011 1466666 55556678887766555555421  233333332222211  


Q ss_pred             HHHHhCCcCCChHHHHHHHHHHHHHHHhhhcCCCCChHHhHHHHHHHHhhcc
Q 013370          161 SIALKYHFRMPPYYTLVLRSLASLEGLAIAGDPHFKTFEAAYPFVIQKLLTE  212 (444)
Q Consensus       161 ~l~~~~~~~vP~~~~li~Ral~~LEGla~~LDP~fdi~~~a~Pyv~r~Ll~~  212 (444)
                                           ..-.|   .|+|.-.+-+..|..+...+-.+
T Consensus       917 ---------------------~~~gg---RL~~P~~CP~~ly~lM~~CW~~~  944 (1025)
T KOG1095|consen  917 ---------------------VLEGG---RLDPPSYCPEKLYQLMLQCWKHD  944 (1025)
T ss_pred             ---------------------HHhCC---ccCCCCCCChHHHHHHHHHccCC
Confidence                                 11122   77888888888887777777665

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=95.63  E-value=0.015  Score=67.15  Aligned_cols=73  Identities=21%  Similarity=0.248  Sum_probs=48.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccC------
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS------   74 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~D------   74 (444)
                      |||.+=+.|-|+..-.++.+ +.+.              .-++-.++. .+++||..|++|||++|.|++++..      
T Consensus       773 ~ey~~~Gtlld~~N~~~~m~-e~lv--------------~~~~~qml~-ive~lH~~~IIHgDiKPDNfll~~~~~~~~~  836 (974)
T KOG1166|consen  773 SEYSPYGTLLDLINTNKVMD-EYLV--------------MFFSCQMLR-IVEHLHAMGIIHGDIKPDNFLLRREICADSD  836 (974)
T ss_pred             eeccccccHHHhhccCCCCC-chhh--------------hHHHHHHHH-HHHHHHhcceecccCCcceeEeecccCCCCc
Confidence            46777777777765322222 1111              123333333 3789999999999999999999741      


Q ss_pred             -CcEEEEecccccccc
Q 013370           75 -GQIGFLDFGLLCRME   89 (444)
Q Consensus        75 -GrLvlLDFGmv~~L~   89 (444)
                       --|.+||||..-.|.
T Consensus       837 ~~~l~lIDfG~siDm~  852 (974)
T KOG1166|consen  837 SKGLYLIDFGRSIDMK  852 (974)
T ss_pred             ccceEEEecccceeee
Confidence             269999999866553

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=95.57  E-value=0.012  Score=60.72  Aligned_cols=134  Identities=15%  Similarity=0.210  Sum_probs=78.0

Q ss_pred             HHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEeccccccc-ch-hhHHhHHHHHHHHHhCCHHHHHHHHHhcC
Q 013370           42 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM-ER-KHQFAMLASIVHIVNGDWQSLVHSLTEMD  119 (444)
Q Consensus        42 La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L-~~-~~R~~l~~ll~alv~~D~~~la~~l~~lG  119 (444)
                      +-..-+...+.-|++.|++.+|++-.|++++..|.+.+-|+||+++= .+ +.-..++        +.+.-++-.+.+-.
T Consensus       355 fys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd~tstfc--------gtpnyiapeilrge  426 (593)
T KOG0695|consen  355 FYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDTTSTFC--------GTPNYIAPEILRGE  426 (593)
T ss_pred             hhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCCCccccccc--------CCCcccchhhhccc
Confidence            33444445678899999999999999999999999999999999853 22 2223333        22333332222211


Q ss_pred             CCCCCCChHHHHHHHHHHHhchh-c---cCCCCcccHHHHHHHHHHHHHhCCcCCChHHHHHHHHHHHHHHHh
Q 013370          120 VVRPGTNTLRVTMDLEDALGEVE-F---KDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLASLEGLA  188 (444)
Q Consensus       120 ~l~~~~d~~~~~~~L~~~l~~~~-~---~~~l~~~~f~~ll~~l~~l~~~~~~~vP~~~~li~Ral~~LEGla  188 (444)
                      -..-.+|-+++.--+-+++..-. +   +..-++.|-   -+-++++..+..+++|..+.  +|+..+|-|..
T Consensus       427 eygfsvdwwalgvlmfemmagrspfdivgm~n~d~nt---edylfqvilekqiriprsls--vkas~vlkgfl  494 (593)
T KOG0695|consen  427 EYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNT---EDYLFQVILEKQIRIPRSLS--VKASHVLKGFL  494 (593)
T ss_pred             ccCceehHHHHHHHHHHHHcCCCCcceecCCCcccch---hHHHHHHHhhhcccccceee--hhhHHHHHHhh
Confidence            12223566655444444443210 1   111112221   13356777888899998753  56666666654

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=95.48  E-value=0.0098  Score=65.68  Aligned_cols=74  Identities=23%  Similarity=0.390  Sum_probs=56.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.+.|+-..         +....+..+      .-+++.-.+ .++.++.-|-.|+|.+-|||+.+..|.+.+-
T Consensus        91 MEycgggslQdiy~~---------Tgplselqi------ayvcRetl~-gl~ylhs~gk~hRdiKGanilltd~gDvkla  154 (829)
T KOG0576|consen   91 MEYCGGGSLQDIYHV---------TGPLSELQI------AYVCRETLQ-GLKYLHSQGKIHRDIKGANILLTDEGDVKLA  154 (829)
T ss_pred             EEecCCCcccceeee---------cccchhHHH------HHHHhhhhc-cchhhhcCCcccccccccceeecccCceeec
Confidence            899999999886433         222223222      133333333 3788899999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||.-+++..
T Consensus       155 Dfgvsaqita  164 (829)
T KOG0576|consen  155 DFGVSAQITA  164 (829)
T ss_pred             ccCchhhhhh
Confidence            9999999875

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=95.46  E-value=0.012  Score=65.11  Aligned_cols=39  Identities=28%  Similarity=0.380  Sum_probs=34.1

Q ss_pred             HHHHHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           52 VQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        52 ~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      +-++..|+-|+|.+|.|++++.+|.+.++|||......-
T Consensus       434 ~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~  472 (601)
T KOG0590|consen  434 KYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRY  472 (601)
T ss_pred             HHHHhcCceeccCccccEEEecCCceEEeecCcceeecc
Confidence            445688999999999999999999999999999876543

>PRK06148 hypothetical protein; Provisional

Probab=95.44  E-value=0.047  Score=63.91  Aligned_cols=36  Identities=25%  Similarity=0.456  Sum_probs=30.4

Q ss_pred             HHcCccccCCCCCCeEEccCC--cEE-EEecccccccch
Q 013370           55 LETGILHADPHPGNLRYTSSG--QIG-FLDFGLLCRMER   90 (444)
Q Consensus        55 l~~GfFHADPHPGNILv~~DG--rLv-lLDFGmv~~L~~   90 (444)
                      +..+++|+|+|+.||++++++  ++. +||||-++.=+.
T Consensus       201 Lp~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~~~~  239 (1013)
T PRK06148        201 LPAQVIHNDANDYNILVDADDGERISGLIDFGDAVHAPR  239 (1013)
T ss_pred             CCcceECCCCCcccEEEcCCCCcceEEEEECcccccccH
Confidence            357999999999999999886  555 999999987643

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=95.39  E-value=0.031  Score=57.71  Aligned_cols=47  Identities=19%  Similarity=0.366  Sum_probs=36.8

Q ss_pred             HHHHHHHHHHHHHHHcCccccCCCCCCeEEccCC-----cEEEEecccccccc
Q 013370           42 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSG-----QIGFLDFGLLCRME   89 (444)
Q Consensus        42 La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DG-----rLvlLDFGmv~~L~   89 (444)
                      +|..++.- .+.+|++.++.+|.+|.|+||..-|     -|-+|||||+++.-
T Consensus       129 iA~Qmi~r-ie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Yr  180 (449)
T KOG1165|consen  129 IAKQMITR-IEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYR  180 (449)
T ss_pred             HHHHHHHH-HHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhc
Confidence            34444333 6778999999999999999997543     58899999999764

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=95.32  E-value=0.05  Score=54.24  Aligned_cols=74  Identities=18%  Similarity=0.235  Sum_probs=57.5

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCC
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDV  120 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~  120 (444)
                      .+-+.+++..-+++-+.|++|||+-.=||++. +|.+.+||||....++...-..|       +.+|...++.-|.+.|+
T Consensus       170 ~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~hp~a~e~-------L~RDv~Ni~~fF~r~gv  241 (268)
T COG1718         170 GLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-DGEPYIIDVSQAVTIDHPNAFEF-------LERDVRNIARFFRRKGV  241 (268)
T ss_pred             HHHHHHHHHHHHHHHhcCcccccchhhheEEE-CCeEEEEECccccccCCCchHHH-------HHHHHHHHHHHHHHcCC
Confidence            34455555544455559999999999999999 99999999999998886554443       45899999999988886


Q ss_pred             CC
Q 013370          121 VR  122 (444)
Q Consensus       121 l~  122 (444)
                      -.
T Consensus       242 ~~  243 (268)
T COG1718         242 EA  243 (268)
T ss_pred             CC
Confidence            53

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=95.27  E-value=0.031  Score=59.51  Aligned_cols=77  Identities=29%  Similarity=0.394  Sum_probs=51.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHH--cCccccCCCCCCeEEcc---CC
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLE--TGILHADPHPGNLRYTS---SG   75 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~--~GfFHADPHPGNILv~~---DG   75 (444)
                      +|||+|-.|.=++....-++        +.   ++    ..++-.+|.+ |+.|-+  .-++|=|++||||++-.   .|
T Consensus       547 LEYceGNDLDFYLKQhklmS--------EK---EA----RSIiMQiVnA-L~YLNEikpPIIHYDLKPgNILLv~GtacG  610 (775)
T KOG1151|consen  547 LEYCEGNDLDFYLKQHKLMS--------EK---EA----RSIIMQIVNA-LKYLNEIKPPIIHYDLKPGNILLVNGTACG  610 (775)
T ss_pred             eeecCCCchhHHHHhhhhhh--------HH---HH----HHHHHHHHHH-HHHHhccCCCeeeeccCCccEEEecCcccc
Confidence            48999988877665432111        00   11    1334444444 444433  47999999999999864   48


Q ss_pred             cEEEEecccccccchhhH
Q 013370           76 QIGFLDFGLLCRMERKHQ   93 (444)
Q Consensus        76 rLvlLDFGmv~~L~~~~R   93 (444)
                      .+.+-|||+.+-++.+.-
T Consensus       611 eIKITDFGLSKIMdddSy  628 (775)
T KOG1151|consen  611 EIKITDFGLSKIMDDDSY  628 (775)
T ss_pred             eeEeeecchhhhccCCcc
Confidence            999999999998887643

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=95.16  E-value=0.0053  Score=66.81  Aligned_cols=117  Identities=16%  Similarity=0.157  Sum_probs=80.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||.-|+.+.|.+.-. |-.         .. ..++    ..-..++.+ ++.+|.++++|+|+|.-|++++.+-.+.+.
T Consensus       134 ~eya~~ge~~~yl~~~-gr~---------~e-~~ar----~~F~q~vsa-veYcH~k~ivHrdLk~eNilL~~~mnikIa  197 (596)
T KOG0586|consen  134 MEYASGGELFDYLVKH-GRM---------KE-KEAR----AKFRQIVSA-VEYCHSKNIVHRDLKAENILLDENMNIKIA  197 (596)
T ss_pred             EEeccCchhHHHHHhc-ccc---------hh-hhhh----hhhHHHHHH-HHHHhhcceeccccchhhcccccccceeee
Confidence            7999999888887643 211         01 1111    122233333 677899999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||.-..++....   .+.+.+.  . ..++.+.+.......|+.|.+.+...+..++.
T Consensus       198 DfgfS~~~~~~~~---lqt~cgs--p-pyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~  250 (596)
T KOG0586|consen  198 DFGFSTFFDYGLM---LQTFCGS--P-PYAAPELFNGKKYDGPEVDIWSLGVVLYALVE  250 (596)
T ss_pred             ccccceeeccccc---ccccCCC--C-CccChHhhcCcccCCcceehhhhhhhheeeee
Confidence            9999988875432   2222111  1 23457888888889999999987776666554

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=95.15  E-value=0.02  Score=59.79  Aligned_cols=29  Identities=21%  Similarity=0.334  Sum_probs=24.0

Q ss_pred             cCccccCCCCCCeEEccCCcEEEEeccccc
Q 013370           57 TGILHADPHPGNLRYTSSGQIGFLDFGLLC   86 (444)
Q Consensus        57 ~GfFHADPHPGNILv~~DGrLvlLDFGmv~   86 (444)
                      ..++|+|.|||||++++++ +.+|||-++.
T Consensus       192 ~~llHGDl~~gNi~~~~~~-~~~iD~e~~~  220 (370)
T TIGR01767       192 ETLLHGDLHSGSIFVSEHE-TKVIDPEFAF  220 (370)
T ss_pred             ceeeeccCCcccEEEcCCC-CEEEcCcccc
Confidence            4789999999999998765 7799986443

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=95.11  E-value=0.024  Score=63.86  Aligned_cols=50  Identities=24%  Similarity=0.387  Sum_probs=40.9

Q ss_pred             HHHHHHHHHHHHHHHcCccccCCCCCCeEEcc---CC--cEEEEecccccccchhh
Q 013370           42 LVNKGVEATLVQLLETGILHADPHPGNLRYTS---SG--QIGFLDFGLLCRMERKH   92 (444)
Q Consensus        42 La~~gv~a~L~QLl~~GfFHADPHPGNILv~~---DG--rLvlLDFGmv~~L~~~~   92 (444)
                      +..+++. .+..||.-|++|+|++|.||+|.-   +|  +..+-|||+++.++...
T Consensus       611 ~l~q~~~-GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~  665 (903)
T KOG1027|consen  611 VLSQIAS-GLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGK  665 (903)
T ss_pred             HHHHHHH-HHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCc
Confidence            3344433 588999999999999999999985   44  78899999999998754

>PRK06149 hypothetical protein; Provisional

Probab=95.07  E-value=0.025  Score=65.83  Aligned_cols=34  Identities=32%  Similarity=0.470  Sum_probs=29.1

Q ss_pred             HHcCccccCCCCCCeEEccC--CcE---EEEeccccccc
Q 013370           55 LETGILHADPHPGNLRYTSS--GQI---GFLDFGLLCRM   88 (444)
Q Consensus        55 l~~GfFHADPHPGNILv~~D--GrL---vlLDFGmv~~L   88 (444)
                      +..|++|+|+|+.|++++++  |+.   ++||||-++.=
T Consensus       206 L~~g~IH~Dl~~~Nilv~~~~~~~~~v~giIDFgD~~~~  244 (972)
T PRK06149        206 LPLQAVHLDITDDNVVGSRDADGRWQPDGVIDFGDLVRT  244 (972)
T ss_pred             CcccccCCCCCcccEEEcCCCCCCcceeEEEEcccchhh
Confidence            47899999999999999976  454   89999999864

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=95.06  E-value=0.025  Score=61.85  Aligned_cols=84  Identities=23%  Similarity=0.296  Sum_probs=58.7

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCC
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDV  120 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~  120 (444)
                      +++-.-|.+..+.+|..|++|+|.+-.|+.++.+|-+.+||||...-....-    .+.+++.+  ||+ +.+.+..--+
T Consensus       673 k~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~~ksgp----fd~f~gtv--~~a-apevl~g~~y  745 (772)
T KOG1152|consen  673 KLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSGP----FDVFVGTV--DYA-APEVLGGEKY  745 (772)
T ss_pred             HHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccchhhhcCCC----cceeeeec--ccc-chhhhCCCcc
Confidence            4555566677888999999999999999999999999999999987654332    22222222  333 3566655555


Q ss_pred             CCCCCChHHHH
Q 013370          121 VRPGTNTLRVT  131 (444)
Q Consensus       121 l~~~~d~~~~~  131 (444)
                      .....|++++.
T Consensus       746 ~gk~qdiwalg  756 (772)
T KOG1152|consen  746 LGKPQDIWALG  756 (772)
T ss_pred             CCCcchhhhhh
Confidence            65666777543

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=95.02  E-value=0.017  Score=54.49  Aligned_cols=35  Identities=17%  Similarity=0.276  Sum_probs=30.3

Q ss_pred             cCccccCCCCCCeEEccCC-----cEEEEecccccccchh
Q 013370           57 TGILHADPHPGNLRYTSSG-----QIGFLDFGLLCRMERK   91 (444)
Q Consensus        57 ~GfFHADPHPGNILv~~DG-----rLvlLDFGmv~~L~~~   91 (444)
                      ..+.|+|+|++|+++..++     .+.++||..++.=++.
T Consensus       120 ~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~g~p~  159 (196)
T smart00587      120 NVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHYGSPA  159 (196)
T ss_pred             eEEeeCCCCccceeeccCCCCCccceEEEecccCCcCChH
Confidence            4789999999999998654     6999999999887764

subfamily of choline kinases

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=94.91  E-value=0.031  Score=56.56  Aligned_cols=85  Identities=18%  Similarity=0.203  Sum_probs=50.1

Q ss_pred             HHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcC----CCCCCCC
Q 013370           51 LVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMD----VVRPGTN  126 (444)
Q Consensus        51 L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG----~l~~~~d  126 (444)
                      ..-++..|++|+|.+|-|++++++|.+.+-||+.+.+-....+.....     ..-.+.++...-...+    ......|
T Consensus       158 vA~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~-----~~~~PPe~~~~~~~~~~~~~~~t~~~D  232 (288)
T PF14531_consen  158 VANLHSYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFP-----VAFTPPELESCAGQFGQNNAPYTFATD  232 (288)
T ss_dssp             HHHHHHTTEEEST-SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS------TTTS-HHHHHHHTSCHHSEEEE-HHHH
T ss_pred             HHHHhhcceEecccceeeEEEcCCCCEEEcChHHHeecCceeeccCCC-----cccCChhhhhhhcccCcccceeeeccC
Confidence            556789999999999999999999999999999988776644421111     1223333333321111    1223457


Q ss_pred             hHHHHHHHHHHHhc
Q 013370          127 TLRVTMDLEDALGE  140 (444)
Q Consensus       127 ~~~~~~~L~~~l~~  140 (444)
                      .+.+...+..++..
T Consensus       233 aW~LG~~ly~lWC~  246 (288)
T PF14531_consen  233 AWQLGITLYSLWCG  246 (288)
T ss_dssp             HHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHc
Confidence            77777777777754

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=94.89  E-value=0.034  Score=62.04  Aligned_cols=77  Identities=26%  Similarity=0.311  Sum_probs=55.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEc-cCCcEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYT-SSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~-~DGrLvl   79 (444)
                      ||-++|++|++++..+=|.= .     +.++-+       .+-.+-+--.++.||+..++|+|++-.|++|. -.|-+.+
T Consensus       651 MEqVPGGSLSsLLrskWGPl-K-----DNEstm-------~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKI  717 (1226)
T KOG4279|consen  651 MEQVPGGSLSSLLRSKWGPL-K-----DNESTM-------NFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKI  717 (1226)
T ss_pred             eecCCCCcHHHHHHhccCCC-c-----cchhHH-------HHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEe
Confidence            89999999999998653310 0     011111       12222233347888999999999999999996 5799999


Q ss_pred             Eecccccccch
Q 013370           80 LDFGLLCRMER   90 (444)
Q Consensus        80 LDFGmv~~L~~   90 (444)
                      -|||-.++|-.
T Consensus       718 SDFGTsKRLAg  728 (1226)
T KOG4279|consen  718 SDFGTSKRLAG  728 (1226)
T ss_pred             cccccchhhcc
Confidence            99999998753

>PRK12396 5-methylribose kinase; Reviewed

Probab=94.80  E-value=0.028  Score=59.36  Aligned_cols=50  Identities=22%  Similarity=0.332  Sum_probs=35.2

Q ss_pred             cCccccCCCCCCeEEccCCcEEEEe--cccccccchhhHHhHHHHHHHHHhCC
Q 013370           57 TGILHADPHPGNLRYTSSGQIGFLD--FGLLCRMERKHQFAMLASIVHIVNGD  107 (444)
Q Consensus        57 ~GfFHADPHPGNILv~~DGrLvlLD--FGmv~~L~~~~R~~l~~ll~alv~~D  107 (444)
                      ..++|||.||||||+++++ ..+||  |+.+|.+.=+.=.-+..++.+..+++
T Consensus       227 ~aLlHGDlHtGSI~v~~~~-~kvIDpEFAfyGP~gFDiG~~lanll~ay~~~~  278 (409)
T PRK12396        227 QALIHGDLHTGSVFVKNDS-TKVIDPEFAFYGPMGYDIGNVMANLMFAWVNAD  278 (409)
T ss_pred             hhhccCcCCCCCEEecCCc-eEEEcccccccCCcHHHHHHHHHHHHHHHhcCc
Confidence            4689999999999999874 66777  67777765554444455555555443

>PRK09902 hypothetical protein; Provisional

Probab=94.75  E-value=0.043  Score=53.30  Aligned_cols=39  Identities=18%  Similarity=0.219  Sum_probs=34.3

Q ss_pred             HHHHHHHcCccccCCCCCCeEEccCCc--EEEEeccccccc
Q 013370           50 TLVQLLETGILHADPHPGNLRYTSSGQ--IGFLDFGLLCRM   88 (444)
Q Consensus        50 ~L~QLl~~GfFHADPHPGNILv~~DGr--LvlLDFGmv~~L   88 (444)
                      .+++||..|+.|+||.|=||+++.+|+  ++||||=-+..-
T Consensus       140 ~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~~  180 (216)
T PRK09902        140 AFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRR  180 (216)
T ss_pred             HHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccchh
Confidence            379999999999999999999998887  999999766543

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=94.74  E-value=0.025  Score=58.89  Aligned_cols=81  Identities=20%  Similarity=0.299  Sum_probs=60.6

Q ss_pred             HHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccC--------------------CcEEEEecccccccchhhHHhHHH
Q 013370           39 LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS--------------------GQIGFLDFGLLCRMERKHQFAMLA   98 (444)
Q Consensus        39 l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~D--------------------GrLvlLDFGmv~~L~~~~R~~l~~   98 (444)
                      +..++.++.++ ..-|+..++.|.|++|.||++...                    -.|.+||||....-.+.. .    
T Consensus       194 ir~m~~QL~~s-v~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h-s----  267 (415)
T KOG0671|consen  194 IRHMGYQLLES-VAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH-S----  267 (415)
T ss_pred             HHHHHHHHHHH-HHHHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCc-c----
Confidence            34677777777 677899999999999999998632                    248899999987665554 2    


Q ss_pred             HHHHHH-hCCHHHHHHHHHhcCCCCCCCChHHH
Q 013370           99 SIVHIV-NGDWQSLVHSLTEMDVVRPGTNTLRV  130 (444)
Q Consensus        99 ll~alv-~~D~~~la~~l~~lG~l~~~~d~~~~  130 (444)
                         .++ .+.| ++.|.+..+|+-.|. |++.+
T Consensus       268 ---~iVsTRHY-RAPEViLgLGwS~pC-DvWSi  295 (415)
T KOG0671|consen  268 ---TIVSTRHY-RAPEVILGLGWSQPC-DVWSI  295 (415)
T ss_pred             ---eeeecccc-CCchheeccCcCCcc-Cceee
Confidence               223 3445 569999999999875 77754

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=94.72  E-value=0.02  Score=57.12  Aligned_cols=33  Identities=27%  Similarity=0.350  Sum_probs=28.4

Q ss_pred             CccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           58 GILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        58 GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      =+.|+|+||||++.+++|++.+|||=-.+-=++
T Consensus       154 v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg~~D~  186 (269)
T COG0510         154 VPCHNDLNPGNLLLTDKGGLFLIDWEYAGLNDP  186 (269)
T ss_pred             eeecCCCCccceEEcCCCcEEEEecccCCCccH
Confidence            489999999999999999999999966655444

>PLN02756 S-methyl-5-thioribose kinase

Probab=94.57  E-value=0.033  Score=59.08  Aligned_cols=32  Identities=22%  Similarity=0.373  Sum_probs=24.9

Q ss_pred             cCccccCCCCCCeEEccCCcEEEEec--ccccccc
Q 013370           57 TGILHADPHPGNLRYTSSGQIGFLDF--GLLCRME   89 (444)
Q Consensus        57 ~GfFHADPHPGNILv~~DGrLvlLDF--Gmv~~L~   89 (444)
                      ..++|||.|||||++++++ ..+||.  +.+|...
T Consensus       230 ~~L~HGDl~~g~i~~~~~~-~~~id~ef~~~g~~~  263 (418)
T PLN02756        230 QALVHGDLHTGSVMVTPDS-TQVIDPEFAFYGPMG  263 (418)
T ss_pred             cceeecCCCCCcEEEcCCC-ceEecchhhccCchH
Confidence            4789999999999999976 777775  4555443

>PLN02236 choline kinase

Probab=94.51  E-value=0.033  Score=57.27  Aligned_cols=36  Identities=19%  Similarity=0.265  Sum_probs=30.8

Q ss_pred             cCccccCCCCCCeEEcc-CCcEEEEecccccccchhh
Q 013370           57 TGILHADPHPGNLRYTS-SGQIGFLDFGLLCRMERKH   92 (444)
Q Consensus        57 ~GfFHADPHPGNILv~~-DGrLvlLDFGmv~~L~~~~   92 (444)
                      ..+.|+|+|||||++++ ++++.+|||..++.-++..
T Consensus       200 ~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~~~~~~  236 (344)
T PLN02236        200 IGFCHNDLQYGNIMIDEETRAITIIDYEYASYNPVAY  236 (344)
T ss_pred             ceEEeCCCCcCcEEEeCCCCcEEEEeehhccccchHH
Confidence            37999999999999986 4789999999998776643

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=94.31  E-value=0.051  Score=57.34  Aligned_cols=41  Identities=27%  Similarity=0.389  Sum_probs=33.5

Q ss_pred             HHHHHHHHHHHHcCccccCCCCCCeEEc--cCC--cEEEEeccccc
Q 013370           45 KGVEATLVQLLETGILHADPHPGNLRYT--SSG--QIGFLDFGLLC   86 (444)
Q Consensus        45 ~gv~a~L~QLl~~GfFHADPHPGNILv~--~DG--rLvlLDFGmv~   86 (444)
                      +++++ ...|+.||+-|+|++..||++.  +|+  .+++-||||+-
T Consensus       349 QlLEa-v~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcL  393 (598)
T KOG4158|consen  349 QLLEA-VTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCL  393 (598)
T ss_pred             HHHHH-HHHHHHccchhhcccccceEEEecCCCCcEEEEcccceee
Confidence            34444 5678899999999999999995  454  89999999984

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=94.31  E-value=0.021  Score=53.83  Aligned_cols=35  Identities=26%  Similarity=0.468  Sum_probs=25.3

Q ss_pred             cCccccCCCCCCeEE-ccCCcEEEEecccccccchh
Q 013370           57 TGILHADPHPGNLRY-TSSGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        57 ~GfFHADPHPGNILv-~~DGrLvlLDFGmv~~L~~~   91 (444)
                      ..|.|.|+|||||++ ..+|++.||||--++.-++.
T Consensus       143 ~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~n~~~  178 (211)
T PF01633_consen  143 LVFCHNDLNPGNILINNKDGEVKLIDFEYAGYNDRA  178 (211)
T ss_dssp             EEEE-S--SGGGEEETSSSSCEEE--GTT-EEEEHH
T ss_pred             ceEeeccCccccEEeccCCCeEEEecHHHHhhccch
Confidence            579999999999999 88999999999988876653

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function

Probab=94.30  E-value=0.072  Score=52.58  Aligned_cols=33  Identities=21%  Similarity=0.312  Sum_probs=28.1

Q ss_pred             CccccCCCCCCeEEccC--C---cEEEEecccccccch
Q 013370           58 GILHADPHPGNLRYTSS--G---QIGFLDFGLLCRMER   90 (444)
Q Consensus        58 GfFHADPHPGNILv~~D--G---rLvlLDFGmv~~L~~   90 (444)
                      =+.|||+|++|+++..+  |   .++++||-+++.=++
T Consensus       216 vl~HGD~w~nNilf~~~~~g~~~~~~liDfQ~~~~g~p  253 (294)
T PF02958_consen  216 VLCHGDFWTNNILFKYDDDGKPIDVVLIDFQLARYGSP  253 (294)
T ss_pred             EEEcCccCHHhEeEccccccccccceeeccccccCCCc
Confidence            37999999999999875  4   699999998877665

All known members of this group are proteins from drosophila and Caenorhabditis elegans.

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=94.29  E-value=0.081  Score=55.90  Aligned_cols=29  Identities=24%  Similarity=0.402  Sum_probs=24.3

Q ss_pred             HcCccccCCCCCCeEEccCCcEEEEecccc
Q 013370           56 ETGILHADPHPGNLRYTSSGQIGFLDFGLL   85 (444)
Q Consensus        56 ~~GfFHADPHPGNILv~~DGrLvlLDFGmv   85 (444)
                      ...+.|||.|||||++.++ .+.+|||=.+
T Consensus       222 ~~~l~HgDl~~gni~~~~~-~~~viD~E~a  250 (401)
T PRK09550        222 AEALLHGDLHTGSIFVTEE-ETKVIDPEFA  250 (401)
T ss_pred             CCceeeccCCcccEEeeCC-CcEEEecccc
Confidence            3579999999999999876 5999999643

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=94.17  E-value=0.024  Score=56.79  Aligned_cols=31  Identities=16%  Similarity=0.197  Sum_probs=28.5

Q ss_pred             cCccccCCCCCCeEEccCCcEEEEecccccc
Q 013370           57 TGILHADPHPGNLRYTSSGQIGFLDFGLLCR   87 (444)
Q Consensus        57 ~GfFHADPHPGNILv~~DGrLvlLDFGmv~~   87 (444)
                      .|+.|+|+|++|++++++|.+.+|||-.++.
T Consensus       196 ~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~  226 (309)
T TIGR02904       196 TVLVHGKLSLSHFLYDETRGGYFINFEKASF  226 (309)
T ss_pred             eeeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence            4899999999999999999999999998754

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=94.09  E-value=0.053  Score=59.45  Aligned_cols=143  Identities=10%  Similarity=0.105  Sum_probs=80.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++-+.|.++.....  .+.    ...++       ...++..+ .+.++.|=.-+|+|+|.-|-|.+++.++.+.+.
T Consensus       614 ~EYmEnGDLnqFl~ahe--apt----~~t~~-------~vsi~tqi-asgmaYLes~nfVHrd~a~rNcLv~~e~~iKia  679 (807)
T KOG1094|consen  614 TEYMENGDLNQFLSAHE--LPT----AETAP-------GVSICTQI-ASGMAYLESLNFVHRDLATRNCLVDGEFTIKIA  679 (807)
T ss_pred             HHHHhcCcHHHHHHhcc--Ccc----cccch-------hHHHHHHH-HHHHHHHHhhchhhccccccceeecCcccEEec
Confidence            68999999999887531  100    00111       12344433 334666777899999999999999999999999


Q ss_pred             ecccccccchhhHHhHH-HHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHhchhccCCCCcccHHHHHHHH
Q 013370           81 DFGLLCRMERKHQFAML-ASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKI  159 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~-~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~~~~~~~~l~~~~f~~ll~~l  159 (444)
                      ||||...|-....+..- .+++-   -.|.+ .+.+ -+|-.+...|+++|.-.+-+++.-- ...+.++.+=.++++..
T Consensus       680 dfgmsR~lysg~yy~vqgr~vlp---iRwma-wEsi-llgkFttaSDvWafgvTlwE~~~~C-~e~Py~~lt~e~vven~  753 (807)
T KOG1094|consen  680 DFGMSRNLYSGDYYRVQGRAVLP---IRWMA-WESI-LLGKFTTASDVWAFGVTLWEVFMLC-REQPYSQLTDEQVVENA  753 (807)
T ss_pred             CcccccccccCCceeeecceeee---eeehh-HHHH-HhccccchhhhhhhHHHHHHHHHHH-hhCchhhhhHHHHHHhh
Confidence            99999866432211110 00000   01111 2222 2465556677887766555544321 23344444444455444


Q ss_pred             HHHH
Q 013370          160 WSIA  163 (444)
Q Consensus       160 ~~l~  163 (444)
                      ..+.
T Consensus       754 ~~~~  757 (807)
T KOG1094|consen  754 GEFF  757 (807)
T ss_pred             hhhc
Confidence            4443

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=94.02  E-value=0.073  Score=61.18  Aligned_cols=66  Identities=12%  Similarity=0.175  Sum_probs=43.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHH---HcCccccCCCCCCeEEccCCcE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLL---ETGILHADPHPGNLRYTSSGQI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl---~~GfFHADPHPGNILv~~DGrL   77 (444)
                      |||++|+.|.++...   .+      +  .++       ..++..++.+ +..+|   ..|++|+|.+|.||+++.++..
T Consensus       762 ~Ey~~~g~L~~~l~~---l~------~--~~~-------~~i~~~ia~~-L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~  822 (968)
T PLN00113        762 HEYIEGKNLSEVLRN---LS------W--ERR-------RKIAIGIAKA-LRFLHCRCSPAVVVGNLSPEKIIIDGKDEP  822 (968)
T ss_pred             EeCCCCCcHHHHHhc---CC------H--HHH-------HHHHHHHHHH-HHHhccCCCCCeecCCCCHHhEEECCCCce
Confidence            799999999988641   11      1  111       2344444333 66777   4599999999999999987754


Q ss_pred             EEEeccccc
Q 013370           78 GFLDFGLLC   86 (444)
Q Consensus        78 vlLDFGmv~   86 (444)
                      .+ +||..+
T Consensus       823 ~~-~~~~~~  830 (968)
T PLN00113        823 HL-RLSLPG  830 (968)
T ss_pred             EE-Eecccc
Confidence            33 255443

>PRK10593 hypothetical protein; Provisional

Probab=94.00  E-value=0.044  Score=55.09  Aligned_cols=33  Identities=15%  Similarity=0.213  Sum_probs=26.2

Q ss_pred             cCccccCCCCCCeEEccC-Cc-EEEEecccccccc
Q 013370           57 TGILHADPHPGNLRYTSS-GQ-IGFLDFGLLCRME   89 (444)
Q Consensus        57 ~GfFHADPHPGNILv~~D-Gr-LvlLDFGmv~~L~   89 (444)
                      ..++|+|.||||++++++ |+ .++||...+.--+
T Consensus       193 psLlHGDlw~gNvl~~~~~~~i~~liDPa~~~~g~  227 (297)
T PRK10593        193 CVLVHGNFTLRSMLKDPRSDQLLAMLNPGLMLWAP  227 (297)
T ss_pred             CeeEeCCCCcccEEECCCCCceEEEECchHhCCCC
Confidence            368999999999999976 55 7899988544333

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=93.98  E-value=0.22  Score=49.88  Aligned_cols=112  Identities=21%  Similarity=0.185  Sum_probs=62.8

Q ss_pred             HHHHHHHHHHHH-------HcCccccCCCCCCeEEccC---CcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHH
Q 013370           44 NKGVEATLVQLL-------ETGILHADPHPGNLRYTSS---GQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVH  113 (444)
Q Consensus        44 ~~gv~a~L~QLl-------~~GfFHADPHPGNILv~~D---GrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~  113 (444)
                      +..+.-|.+|++       ..|++|+|.+|-|+++...   .-+.+.|||...++....-      +-+. .+-+.-++-
T Consensus       109 Ea~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~------~~G~-~GtP~fmaP  181 (355)
T KOG0033|consen  109 EADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEA------WHGF-AGTPGYLSP  181 (355)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCccc------cccc-cCCCcccCH
Confidence            344445566664       5699999999999998743   3689999999999983321      1111 123333333


Q ss_pred             HHHhcCCCCCCCChHHHHHHHHHHHhchhccCCCCcccHHHHHHHHHHHHHh
Q 013370          114 SLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALK  165 (444)
Q Consensus       114 ~l~~lG~l~~~~d~~~~~~~L~~~l~~~~~~~~l~~~~f~~ll~~l~~l~~~  165 (444)
                      ..++-.-.....|++...--+.-++..+   .+..+-+-.++.+++..-.++
T Consensus       182 Evvrkdpy~kpvDiW~cGViLfiLL~G~---~PF~~~~~~rlye~I~~g~yd  230 (355)
T KOG0033|consen  182 EVLKKDPYSKPVDIWACGVILYILLVGY---PPFWDEDQHRLYEQIKAGAYD  230 (355)
T ss_pred             HHhhcCCCCCcchhhhhhHHHHHHHhCC---CCCCCccHHHHHHHHhccccC
Confidence            3333344444567776555555555443   122222333455555444443

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=93.88  E-value=0.054  Score=58.32  Aligned_cols=135  Identities=19%  Similarity=0.144  Sum_probs=79.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      ||+|+|+.|.+.+.-..+    .+   +-.+++       .+ -..+-+.++.|+..+.+|+|+-.-|.|+..++-+.+-
T Consensus       240 mEl~~gGsL~~~L~k~~~----~v---~~~ek~-------~~-~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKIS  304 (474)
T KOG0194|consen  240 MELCNGGSLDDYLKKNKK----SL---PTLEKL-------RF-CYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKIS  304 (474)
T ss_pred             EEecCCCcHHHHHHhCCC----CC---CHHHHH-------HH-HHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeC
Confidence            899999999998764321    11   112222       12 2334456888999999999999999999999999999


Q ss_pred             ecccccccchh-hHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHhchhccCCCCcccHHHHHHHH
Q 013370           81 DFGLLCRMERK-HQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKI  159 (444)
Q Consensus        81 DFGmv~~L~~~-~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~~~~~~~~l~~~~f~~ll~~l  159 (444)
                      |||+...=+.. .......+-       ..-++-....-|..++.+|++.|.--+-+++..-  ..+....+..++..++
T Consensus       305 DFGLs~~~~~~~~~~~~~klP-------irWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g--~~Py~g~~~~~v~~kI  375 (474)
T KOG0194|consen  305 DFGLSRAGSQYVMKKFLKKLP-------IRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENG--AEPYPGMKNYEVKAKI  375 (474)
T ss_pred             ccccccCCcceeeccccccCc-------ceecChhhhccCccccccchhheeeeEEeeeccC--CCCCCCCCHHHHHHHH
Confidence            99996554411 111111110       0111222234457777888886643333333221  1245555555444443

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=93.55  E-value=0.12  Score=56.73  Aligned_cols=110  Identities=20%  Similarity=0.200  Sum_probs=75.3

Q ss_pred             HHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHH
Q 013370           51 LVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRV  130 (444)
Q Consensus        51 L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~  130 (444)
                      +.+++..|..|.|++|-||+++.+|.+.+.|||.-..+-+....          ++++..++..+.. |.. ...|-+.+
T Consensus       110 ld~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~----------cgt~eymApEI~~-gh~-~a~D~ws~  177 (612)
T KOG0603|consen  110 LDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA----------CGTYEYRAPEIIN-GHL-SAADWWSF  177 (612)
T ss_pred             HhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhhc----------ccchhhhhhHhhh-ccC-Ccccchhh
Confidence            68899999999999999999999999999999997766554433          6788888888777 444 33455544


Q ss_pred             HHHHHHHHhchhccCCCCcccHHHHHHHHHHHHHhCCcCCChHHHHHHHHHHH
Q 013370          131 TMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLAS  183 (444)
Q Consensus       131 ~~~L~~~l~~~~~~~~l~~~~f~~ll~~l~~l~~~~~~~vP~~~~li~Ral~~  183 (444)
                      ..-.-+.+...        ..|..   +.+....+-.+.+|.++.-..|++..
T Consensus       178 gvl~felltg~--------~pf~~---~~~~~Il~~~~~~p~~l~~~a~~~~~  219 (612)
T KOG0603|consen  178 GVLAFELLTGT--------LPFGG---DTMKRILKAELEMPRELSAEARSLFR  219 (612)
T ss_pred             hhhHHHHhhCC--------CCCch---HHHHHHhhhccCCchhhhHHHHHHHH
Confidence            33222222221        11222   33344455567888888888887754

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=93.45  E-value=0.05  Score=55.49  Aligned_cols=33  Identities=30%  Similarity=0.415  Sum_probs=29.3

Q ss_pred             ccccCCCCCCeEEcc-CCcEEEEecccccccchh
Q 013370           59 ILHADPHPGNLRYTS-SGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        59 fFHADPHPGNILv~~-DGrLvlLDFGmv~~L~~~   91 (444)
                      +.|.|+|||||++.+ +|++.+|||.-.+.-++.
T Consensus       184 ~CHnDl~~~NiL~~~~~~~l~lID~EYag~nd~~  217 (330)
T PLN02421        184 FAHNDLLSGNLMLNEDEGKLYFIDFEYGSYSYRG  217 (330)
T ss_pred             EEECCCCcccEEEeCCCCcEEEEcccccCCCccH
Confidence            899999999999986 478999999998887764

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=93.01  E-value=0.27  Score=53.54  Aligned_cols=74  Identities=18%  Similarity=0.270  Sum_probs=51.3

Q ss_pred             CccccCCCCCCeEE-ccCCcEEEEecccccccchhhH-HhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHH
Q 013370           58 GILHADPHPGNLRY-TSSGQIGFLDFGLLCRMERKHQ-FAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLE  135 (444)
Q Consensus        58 GfFHADPHPGNILv-~~DGrLvlLDFGmv~~L~~~~R-~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~  135 (444)
                      -++|+|++|.|+.+ ..-|-+.+-|||+--.+-|..+ ...|..+.      | ...+.+..-.+-.|.+|++.+.--|.
T Consensus       138 HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~TsCGSLA------Y-SAPEILLGDsYDAPAVDiWSLGVILy  210 (864)
T KOG4717|consen  138 HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTTSCGSLA------Y-SAPEILLGDSYDAPAVDIWSLGVILY  210 (864)
T ss_pred             hhhcccCCcceeEEeeecCceEeeeccccccCCCcchhhcccchhh------c-cCchhhhcCccCCcchhhhHHHHHHH
Confidence            47999999999765 4569999999999988877655 33444321      1 23566655556677788887765554


Q ss_pred             HHH
Q 013370          136 DAL  138 (444)
Q Consensus       136 ~~l  138 (444)
                      -++
T Consensus       211 MLV  213 (864)
T KOG4717|consen  211 MLV  213 (864)
T ss_pred             HHH
Confidence            444

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=92.95  E-value=0.074  Score=59.98  Aligned_cols=77  Identities=21%  Similarity=0.227  Sum_probs=61.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      .||++.+.|+.++....|.       ++-.|-.        -+-+|+.+.++.|-+.|++|+|+-.-||||+.+=.-.+-
T Consensus       709 TEyMENGsLDsFLR~~DGq-------ftviQLV--------gMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVs  773 (996)
T KOG0196|consen  709 TEYMENGSLDSFLRQNDGQ-------FTVIQLV--------GMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVS  773 (996)
T ss_pred             hhhhhCCcHHHHHhhcCCc-------eEeehHH--------HHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEec
Confidence            3899999999998765431       2222211        256889999999999999999999999999998888899


Q ss_pred             ecccccccchhh
Q 013370           81 DFGLLCRMERKH   92 (444)
Q Consensus        81 DFGmv~~L~~~~   92 (444)
                      |||+-..+.++.
T Consensus       774 DFGLSRvledd~  785 (996)
T KOG0196|consen  774 DFGLSRVLEDDP  785 (996)
T ss_pred             cccceeecccCC
Confidence            999999886654

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=92.77  E-value=1.7  Score=38.67  Aligned_cols=80  Identities=15%  Similarity=0.167  Sum_probs=48.5

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcC
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMD  119 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG  119 (444)
                      ..++..++.+ +..+|..|      +|.||+++.+|.+.+  ||++...+.....         ...-| ...|.+.. +
T Consensus        20 ~~i~~qi~~~-L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~~~---------g~~~y-~aPE~~~~-~   79 (176)
T smart00750       20 WAVCLQCLRA-LRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPEQSR---------VDPYF-MAPEVIQG-Q   79 (176)
T ss_pred             HHHHHHHHHH-HHHHHhcC------CcccEeEcCccceee--ccceEeeccccCC---------Ccccc-cChHHhcC-C
Confidence            3455555544 67777777      999999999998888  9998876553210         01111 11333332 2


Q ss_pred             CCCCCCChHHHHHHHHHHHh
Q 013370          120 VVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus       120 ~l~~~~d~~~~~~~L~~~l~  139 (444)
                      -..+..|++.+..-+..++.
T Consensus        80 ~~~~~~DiwSlG~il~ellt   99 (176)
T smart00750       80 SYTEKADIYSLGITLYEALD   99 (176)
T ss_pred             CCcchhhHHHHHHHHHHHHh
Confidence            23445777777666665553

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=92.69  E-value=0.17  Score=54.35  Aligned_cols=53  Identities=25%  Similarity=0.282  Sum_probs=43.8

Q ss_pred             HHHHHHHHHHHHHHHHHc---------CccccCCCCCCeEEccCCcEEEEecccccccchhhH
Q 013370           40 LDLVNKGVEATLVQLLET---------GILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ   93 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~---------GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R   93 (444)
                      -++++.+.+- +..||++         ++.|+|.+--||||..|+.-++.|||+.-++++..-
T Consensus       310 cria~SmarG-La~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~  371 (534)
T KOG3653|consen  310 CRIAESMARG-LAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKP  371 (534)
T ss_pred             HHHHHHHHHH-HHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCC
Confidence            3556665554 7778775         689999999999999999999999999999987543

>smart00146 PI3Kc Phosphoinositide 3-kinase, catalytic domain

Probab=92.67  E-value=0.11  Score=49.50  Aligned_cols=35  Identities=20%  Similarity=0.355  Sum_probs=28.7

Q ss_pred             HHHcCccccCCCCCCeEEccCCcEEEEeccccccc
Q 013370           54 LLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM   88 (444)
Q Consensus        54 Ll~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L   88 (444)
                      ++.+-+-=+|-||+||+++.+|+++-+|||.+-.-
T Consensus        98 ~~~YilglgDRh~~NIli~~~G~v~hIDfg~~~~~  132 (202)
T smart00146       98 VITYILGLGDRHNDNIMLDKTGHLFHIDFGFILGN  132 (202)
T ss_pred             HHHHHhcCCCCCCCcEEEeCCCCEEEEechhhhCc
Confidence            44455566899999999999999999999986443

Phosphoinositide 3-kinase isoforms participate in a variety of processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, and apoptosis. These homologues may be either lipid kinases and/or protein kinases: the former phosphorylate the 3-position in the inositol ring of inositol phospholipids. The ataxia telangiectesia-mutated gene produced, the targets of rapamycin (TOR) and the DNA-dependent kinase have not been found to possess lipid kinase activity. Some of this family possess PI-4 kinase activities.

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=92.46  E-value=0.14  Score=52.65  Aligned_cols=87  Identities=18%  Similarity=0.270  Sum_probs=57.5

Q ss_pred             HHHHHHHHHHH-------HHcCccccCCCCCCeEEccC----CcEEEEecccccccchhhHHhHHHHHHHHHhCC-----
Q 013370           44 NKGVEATLVQL-------LETGILHADPHPGNLRYTSS----GQIGFLDFGLLCRMERKHQFAMLASIVHIVNGD-----  107 (444)
Q Consensus        44 ~~gv~a~L~QL-------l~~GfFHADPHPGNILv~~D----GrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D-----  107 (444)
                      ..+|.+.+.|+       +..=+.|+|++|.||+|+-|    |++.+-|+|+..-+..        -+.-+...|     
T Consensus       131 ~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~--------plkpl~s~d~VVVT  202 (438)
T KOG0666|consen  131 RSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNN--------PLKPLASLDPVVVT  202 (438)
T ss_pred             HHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhc--------cccccccCCceEEE
Confidence            34555555555       45568999999999999988    8999999999755432        222233333     


Q ss_pred             -HHHHHHHHHhcCCCCCCCChHHHHHHHHHHH
Q 013370          108 -WQSLVHSLTEMDVVRPGTNTLRVTMDLEDAL  138 (444)
Q Consensus       108 -~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l  138 (444)
                       |.++.+.+...--.++..|++++.=-+.+++
T Consensus       203 iWYRAPELLLGa~hYT~AiDvWAiGCIfaElL  234 (438)
T KOG0666|consen  203 IWYRAPELLLGARHYTKAIDVWAIGCIFAELL  234 (438)
T ss_pred             EEecChHHhcccccccchhhhHHHHHHHHHHH
Confidence             4566777765555667788886644344433

>cd00893 PI4Kc_III Phosphoinositide 4-kinase (PI4K), Type III, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=91.22  E-value=0.13  Score=52.16  Aligned_cols=29  Identities=34%  Similarity=0.591  Sum_probs=25.7

Q ss_pred             cCCCCCCeEEccCCcEEEEecccccccch
Q 013370           62 ADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        62 ADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      +|=|+||||++++|+++=||||.+=...+
T Consensus       144 gDRH~~NILid~~G~liHIDFG~ilg~~p  172 (289)
T cd00893         144 KDRHNGNILLDSDGHIIHIDFGFILDSSP  172 (289)
T ss_pred             cccCCCceEECCCCCEEEEehHHhhCcCC
Confidence            79999999999999999999999755443

PI4Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 4-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) to generate PtdIns(4)P, the major precursor in the synthesis of other phosphoinositides including PtdIns(4,5)P2, PtdIns(3,4)P2, and PtdIns(3,4,5)P3. There are two types of PI4Ks, types II and III. Type II PI4Ks lack the characteristic catalytic kinase domain present in PI3Ks and type III PI4Ks, and are excluded from this family. Two isoforms of type III PI4K, alpha and beta, exist in most eukaryotes.

>PLN02876 acyl-CoA dehydrogenase

Probab=91.13  E-value=0.14  Score=58.73  Aligned_cols=35  Identities=34%  Similarity=0.518  Sum_probs=28.7

Q ss_pred             cCccccCCCCCCeEEccC-Cc-EEEEecccccccchh
Q 013370           57 TGILHADPHPGNLRYTSS-GQ-IGFLDFGLLCRMERK   91 (444)
Q Consensus        57 ~GfFHADPHPGNILv~~D-Gr-LvlLDFGmv~~L~~~   91 (444)
                      .+++|+|.||||+++.++ ++ .++|||.++..=++-
T Consensus       225 ~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~GdPl  261 (822)
T PLN02876        225 TGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLGNQM  261 (822)
T ss_pred             cceEecCcccccEEEcCCCCeEEEEEeeeccccCChH
Confidence            369999999999999974 45 589999988766654

>cd00891 PI3Kc Phosphoinositide 3-kinase (PI3K), catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=91.13  E-value=1.4  Score=45.98  Aligned_cols=115  Identities=20%  Similarity=0.290  Sum_probs=62.8

Q ss_pred             ccCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHhc
Q 013370           61 HADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGE  140 (444)
Q Consensus        61 HADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~~  140 (444)
                      =+|=|+|||+++.+|++.=||||.+=.-.+.                         ..++.+ +.-+-.+++++...++.
T Consensus       207 igDRH~~NILi~~~G~~~HIDFG~ilg~~~~-------------------------~~~~~~-E~~PFrLT~~mv~~mGg  260 (352)
T cd00891         207 IGDRHNDNIMLTKTGHLFHIDFGHFLGNFKK-------------------------KFGIKR-ERAPFVLTPDMAYVMGG  260 (352)
T ss_pred             ccccCCCceEECCCCCEEEEehHHhhccCCc-------------------------cCCCCC-CCCCeeecHHHHHHhCC
Confidence            3799999999999999999999986321110                         113322 22233456666666654


Q ss_pred             hhccCCCCcccHHHHHHHHHHHHHhCCcCCChHHHHHHHHHHHHHHHhhhcCCCCChHHhHHHHHHHHhhccCCh
Q 013370          141 VEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLASLEGLAIAGDPHFKTFEAAYPFVIQKLLTENSV  215 (444)
Q Consensus       141 ~~~~~~l~~~~f~~ll~~l~~l~~~~~~~vP~~~~li~Ral~~LEGla~~LDP~fdi~~~a~Pyv~r~Ll~~~s~  215 (444)
                      .  + +-.--.|.....+.+..++++.    ..+..++..+      ...--|.++-.+. -.|+.+++.-+.+.
T Consensus       261 ~--~-s~~~~~F~~~c~~~~~~LR~~~----~~il~l~~lm------~~~~lp~~~~~~~-i~~l~~r~~l~~s~  321 (352)
T cd00891         261 G--D-SEKFQRFEDLCCKAYNILRKHG----NLFINLFSLM------LSAGIPELQSIED-IEYLRDALALDKSD  321 (352)
T ss_pred             C--C-CcccchHHHHHHHHHHHHhcCH----HHHHHHHHhh------ccCCCCccCcHHH-HHHHHHHhCCCCCH
Confidence            2  1 1011245566556666666543    2222222222      2222366664333 34777777766553

PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. Class I enzymes are heterodimers and exist in multiple isoforms c

>cd05168 PI4Kc_III_beta Phosphoinositide 4-kinase (PI4K), Type III, beta isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=90.76  E-value=0.15  Score=51.75  Aligned_cols=29  Identities=31%  Similarity=0.560  Sum_probs=25.5

Q ss_pred             cCCCCCCeEEccCCcEEEEecccccccch
Q 013370           62 ADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        62 ADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      +|=|+||||++.+|+++=||||.+=...+
T Consensus       146 gDRH~~NILi~~~G~liHIDFG~~fg~~~  174 (293)
T cd05168         146 KDRHNGNILIDNDGHIIHIDFGFMLSNSP  174 (293)
T ss_pred             cccCCCceEEcCCCCEEEEehHHhhcccc
Confidence            79999999999999999999998755443

PI4Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 4-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) to generate PtdIns(4)P, the major precursor in the synthesis of other phosphoinositides including PtdIns(4,5)P2, PtdIns(3,4)P2, and PtdIns(3,4,5)P3. Two isoforms of type III PI4K, alpha and beta, exist in most eukaryotes. PI4KIIIbeta (also called Pik1p in yeast) is a 110 kDa protein that is localized to the Golgi and the nucleus. It is required for maintaining the structural integrity of the Golgi complex (GC), and is a key regulator of protein transport from the GC to the plasma membrane. PI4KII

>cd00142 PI3Kc_like Phosphoinositide 3-kinase (PI3K)-like family, catalytic domain; The PI3K-like catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=90.51  E-value=0.16  Score=48.94  Aligned_cols=26  Identities=31%  Similarity=0.597  Sum_probs=23.8

Q ss_pred             cccCCCCCCeEEcc-CCcEEEEecccc
Q 013370           60 LHADPHPGNLRYTS-SGQIGFLDFGLL   85 (444)
Q Consensus        60 FHADPHPGNILv~~-DGrLvlLDFGmv   85 (444)
                      -=+|=||+||+++. +|+++-+|||.+
T Consensus       131 glgDRh~~NIli~~~~G~~~hIDfg~~  157 (219)
T cd00142         131 GIGDRHPDNIMIDLDTGKLFHIDFGFI  157 (219)
T ss_pred             ccCCCCCccEEEECCCCeEEEEeeHHh
Confidence            34899999999998 999999999986

Members of the family include PI3K, phosphoinositide 4-kinase (PI4K), PI3K-related protein kinases (PIKKs), and TRansformation/tRanscription domain-Associated Protein (TRRAP). PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives, while PI4K catalyze the phosphorylation of the 4-hydroxyl of PtdIns. PIKKs are protein kinases that catalyze the phosphorylation of serine/threonine residues, especially those that are followed by a glutamine. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=90.12  E-value=0.58  Score=48.42  Aligned_cols=154  Identities=18%  Similarity=0.156  Sum_probs=84.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCC---cE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG---QI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DG---rL   77 (444)
                      ||-+.|++|-.-+.-+.-        +.++   ++.    ++ .+-+.+.|.-|+..|+-|+|++|.||+-....   -+
T Consensus       155 fEKm~GGplLshI~~~~~--------F~E~---EAs----~v-vkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPv  218 (463)
T KOG0607|consen  155 FEKMRGGPLLSHIQKRKH--------FNER---EAS----RV-VKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPV  218 (463)
T ss_pred             EecccCchHHHHHHHhhh--------ccHH---HHH----HH-HHHHHHHHHHHhhcCcccccCCccceeecCCCCcCce
Confidence            577888887665443221        1111   111    22 23334568999999999999999999997543   46


Q ss_pred             EEEecccccccchh-------hHHhHHHHHHHHHhCCHHHHHHHHHhc-CCCCCCCChHHHHHHHHHHHhchhc--cC--
Q 013370           78 GFLDFGLLCRMERK-------HQFAMLASIVHIVNGDWQSLVHSLTEM-DVVRPGTNTLRVTMDLEDALGEVEF--KD--  145 (444)
Q Consensus        78 vlLDFGmv~~L~~~-------~R~~l~~ll~alv~~D~~~la~~l~~l-G~l~~~~d~~~~~~~L~~~l~~~~~--~~--  145 (444)
                      .++||-+-..+...       +.+ +..- ++-..-=..+++++|++- -+.+..-|.+.+..-+.-++..|.-  |.  
T Consensus       219 KiCDfDLgSg~k~~~~~spastP~-L~tP-vGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg  296 (463)
T KOG0607|consen  219 KICDFDLGSGIKLNNDCSPASTPE-LLTP-VGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCG  296 (463)
T ss_pred             eeeccccccccccCCCCCCCCCcc-ccCc-ccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccC
Confidence            78888655443211       111 1000 000000123456666543 3556677899888888888876531  11  


Q ss_pred             ---CCCcc-cHHHHHHHHHHHHHhCCcCCCh
Q 013370          146 ---GIPDV-KFSRVLGKIWSIALKYHFRMPP  172 (444)
Q Consensus       146 ---~l~~~-~f~~ll~~l~~l~~~~~~~vP~  172 (444)
                         +.+.- .-..--+.+++-.++..+.+|.
T Consensus       297 ~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPd  327 (463)
T KOG0607|consen  297 ADCGWDRGEVCRVCQNKLFESIQEGKYEFPD  327 (463)
T ss_pred             CcCCccCCCccHHHHHHHHHHHhccCCcCCh
Confidence               11110 1112345667777777777765

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=89.94  E-value=0.45  Score=48.27  Aligned_cols=85  Identities=15%  Similarity=0.213  Sum_probs=53.5

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEc-cC-CcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhc
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYT-SS-GQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEM  118 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~-~D-GrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~l  118 (444)
                      .+...+ -+.+.-+|..+++|+|++..||+|= +| -++.++|||......-..     .-+.+..+--...+.+...+-
T Consensus       125 ~v~~ql-~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV-----~~~~~~~~y~~pe~~~~~~ne  198 (378)
T KOG1345|consen  125 KVFAQL-LSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTV-----KYLEYVNNYHAPELCDTVVNE  198 (378)
T ss_pred             HHHHHH-HHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCcee-----hhhhhhcccCCcHHHhhcccc
Confidence            344443 4447889999999999999999984 33 599999999986654321     222223333334444444332


Q ss_pred             C-CCCCCCChHHHH
Q 013370          119 D-VVRPGTNTLRVT  131 (444)
Q Consensus       119 G-~l~~~~d~~~~~  131 (444)
                      - ...|..|.+.|.
T Consensus       199 ~~~~~ps~D~WqfG  212 (378)
T KOG1345|consen  199 KLVVNPSTDIWQFG  212 (378)
T ss_pred             ceEecccccchhee
Confidence            2 345677887654

>cd05167 PI4Kc_III_alpha Phosphoinositide 4-kinase (PI4K), Type III, alpha isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=89.84  E-value=0.2  Score=51.31  Aligned_cols=31  Identities=29%  Similarity=0.549  Sum_probs=26.8

Q ss_pred             cccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           60 LHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        60 FHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      =-+|=|+|||+++.+|+++=||||.+-..++
T Consensus       163 gigDRHn~NILid~~G~l~HIDFG~il~~~p  193 (311)
T cd05167         163 QIKDRHNGNIMIDDDGHIIHIDFGFIFEISP  193 (311)
T ss_pred             hccccCccceEEcCCCCEEEEeeHHhhccCC
Confidence            3489999999999999999999999765543

PI4Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 4-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) to generate PtdIns(4)P, the major precursor in the synthesis of other phosphoinositides including PtdIns(4,5)P2, PtdIns(3,4)P2, and PtdIns(3,4,5)P3. Two isoforms of type III PI4K, alpha and beta, exist in most eukaryotes. PI4KIIIalpha is a 220 kDa protein found in the plasma membrane and the endoplasmic reticulum (ER). The role of PI4KIIIalpha in the ER remains unclear. In the plasma membrane, it provides PtdIns(4)P, which is then converted by PI5Ks to PtdIns(4,5)P2, an important signaling mole

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=89.78  E-value=0.75  Score=53.72  Aligned_cols=37  Identities=43%  Similarity=0.602  Sum_probs=34.2

Q ss_pred             HHHHHHcCccccCCCCCCeEEccCCcEEEEecccccc
Q 013370           51 LVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCR   87 (444)
Q Consensus        51 L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~   87 (444)
                      ++.++..|++|+|.+|.|++|+.=|++.+-|||+...
T Consensus       156 ~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~  192 (1205)
T KOG0606|consen  156 VEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKK  192 (1205)
T ss_pred             hHhhccCCeecCCCCCCcceeeecccccccchhhhhh
Confidence            6778999999999999999999999999999998754

>cd00892 PIKKc_ATR ATR (Ataxia telangiectasia and Rad3-related), catalytic domain; The ATR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=89.74  E-value=0.21  Score=49.07  Aligned_cols=26  Identities=31%  Similarity=0.539  Sum_probs=23.5

Q ss_pred             ccCCCCCCeEEcc-CCcEEEEeccccc
Q 013370           61 HADPHPGNLRYTS-SGQIGFLDFGLLC   86 (444)
Q Consensus        61 HADPHPGNILv~~-DGrLvlLDFGmv~   86 (444)
                      =+|=||+||+++. +|+++-+|||.+=
T Consensus       143 igDRh~~NIli~~~tG~~~HIDfg~~~  169 (237)
T cd00892         143 LGDRHGENILFDSNTGDVVHVDFNCLF  169 (237)
T ss_pred             cCCCCcccEEEEcCCCcEEEEehHhhh
Confidence            3799999999997 9999999999763

ATR is also referred to as Mei-41 (Drosophila), Esr1/Mec1p (Saccharomyces cerevisiae), Rad3 (Schizosaccharomyces pombe), and FRAP-related protein (human). ATR is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). ATR contains a UME domain of unknown function, a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. Together with its downstream effector kinase, Chk1, ATR plays a central

>cd05164 PIKKc Phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily, catalytic domain; The PIKK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=89.31  E-value=0.22  Score=48.33  Aligned_cols=26  Identities=27%  Similarity=0.478  Sum_probs=23.7

Q ss_pred             cccCCCCCCeEEcc-CCcEEEEecccc
Q 013370           60 LHADPHPGNLRYTS-SGQIGFLDFGLL   85 (444)
Q Consensus        60 FHADPHPGNILv~~-DGrLvlLDFGmv   85 (444)
                      -=+|=||+||+++. +|+++-+|||.+
T Consensus       134 glgDRh~~NIli~~~tG~v~hIDf~~~  160 (222)
T cd05164         134 GLGDRHLDNILIDRETGEVVHIDFGCI  160 (222)
T ss_pred             ccCCCCCceEEEECCCCcEEEEccHHh
Confidence            34799999999998 899999999986

Members include ATM (Ataxia telangiectasia mutated), ATR (Ataxia telangiectasia and Rad3-related), TOR (Target of rapamycin), SMG-1 (Suppressor of morphogenetic effect on genitalia-1), and DNA-PK (DNA-dependent protein kinase). PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). They show strong preference for phosphorylating serine/threonine residues followed by a glutamine and are also referred to as (S/T)-Q-directed kinases. They all contain a FATC (FRAP, ATM and TRRAP, C-terminal) d

>cd05172 PIKKc_DNA-PK DNA-dependent protein kinase (DNA-PK), catalytic domain; The DNA-PK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=88.94  E-value=0.26  Score=48.36  Aligned_cols=26  Identities=27%  Similarity=0.308  Sum_probs=23.1

Q ss_pred             cccCCCCCCeEEc-cCCcEEEEecccc
Q 013370           60 LHADPHPGNLRYT-SSGQIGFLDFGLL   85 (444)
Q Consensus        60 FHADPHPGNILv~-~DGrLvlLDFGmv   85 (444)
                      -=+|=||+||+++ .+|+++-+|||.+
T Consensus       139 glgDRH~~NIli~~~tG~v~HIDfg~~  165 (235)
T cd05172         139 GIGDRHLSNFLVDLETGGLVGIDFGHA  165 (235)
T ss_pred             eccCCCcccEEEECCCCcEEEEeeHhh
Confidence            4489999999998 6899999999965

DNA-PK is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). DNA-PK is comprised of a regulatory subunit, containing the Ku70/80 subunit, and a catalytic subunit, which contains a NUC194 domain of unknown function, a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. It is part of a multi-component system involved in non-homologous end joining (NHEJ), a process of repairing double st

>cd00896 PI3Kc_III Phosphoinositide 3-kinase (PI3K), class III, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=88.89  E-value=0.24  Score=51.42  Aligned_cols=26  Identities=35%  Similarity=0.562  Sum_probs=24.2

Q ss_pred             cCCCCCCeEEccCCcEEEEecccccc
Q 013370           62 ADPHPGNLRYTSSGQIGFLDFGLLCR   87 (444)
Q Consensus        62 ADPHPGNILv~~DGrLvlLDFGmv~~   87 (444)
                      +|=|+|||+++.+|+++=||||.+=.
T Consensus       207 gDRH~~NILi~~~G~~~HIDFG~ilg  232 (350)
T cd00896         207 GDRHLDNLLLTKDGKLFHIDFGYILG  232 (350)
T ss_pred             cccCCCcEEEcCCCCEEEEEhHHhhC
Confidence            79999999999999999999998754

PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class III PI3Ks, also called Vps34 (vacuolar protein sorting 34), contain an N-terminal lipid binding C2 domain, a PI3K homology domain of unknown function, and a C-termin

>cd05166 PI3Kc_II Phosphoinositide 3-kinase (PI3K), class II, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=88.64  E-value=0.28  Score=51.08  Aligned_cols=24  Identities=38%  Similarity=0.628  Sum_probs=22.8

Q ss_pred             cCCCCCCeEEccCCcEEEEecccc
Q 013370           62 ADPHPGNLRYTSSGQIGFLDFGLL   85 (444)
Q Consensus        62 ADPHPGNILv~~DGrLvlLDFGmv   85 (444)
                      +|=|+|||+++++|++.=||||.+
T Consensus       207 gDRH~~NILl~~~G~l~HIDFG~~  230 (353)
T cd05166         207 CDRHNDNIMLTKSGHMFHIDFGKF  230 (353)
T ss_pred             cccCCCceEECCCCCEEEEeeHHh
Confidence            799999999999999999999975

PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class II PI3Ks preferentially use PtdIns as a substrate to produce PtdIns(3)P, but can also phosphorylate PtdIns(4)P. They function as monomers and do not associate with any

>cd05173 PI3Kc_IA_beta Phosphoinositide 3-kinase (PI3K), class IA, beta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=88.58  E-value=0.27  Score=51.35  Aligned_cols=25  Identities=32%  Similarity=0.570  Sum_probs=23.4

Q ss_pred             cCCCCCCeEEccCCcEEEEeccccc
Q 013370           62 ADPHPGNLRYTSSGQIGFLDFGLLC   86 (444)
Q Consensus        62 ADPHPGNILv~~DGrLvlLDFGmv~   86 (444)
                      +|=|+|||+++++|++.=||||.+=
T Consensus       213 GDRHn~NILi~~~G~l~HIDFG~il  237 (362)
T cd05173         213 GDRHSDNIMVRKNGQLFHIDFGHIL  237 (362)
T ss_pred             cccCCCceEECCCCCEEEEehHHhh
Confidence            7999999999999999999999863

PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. Class I enzymes are heterodimers and exist in multiple isoforms consisting of one catalytic subunit (out of four isoforms) and one of several regulatory subunits. They are further classified into class IA (alpha, beta and de

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=88.36  E-value=0.39  Score=53.96  Aligned_cols=41  Identities=24%  Similarity=0.354  Sum_probs=35.2

Q ss_pred             HHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhh
Q 013370           52 VQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKH   92 (444)
Q Consensus        52 ~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~   92 (444)
                      ..|=..+++|+|+-.-|+++-....+.+.|||+|..|...+
T Consensus       226 ~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ne  266 (1039)
T KOG0199|consen  226 QYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENE  266 (1039)
T ss_pred             HHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCC
Confidence            33445799999999999999988889999999999998753

>cd05169 PIKKc_TOR TOR (Target of rapamycin), catalytic domain; The TOR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=88.25  E-value=0.28  Score=49.08  Aligned_cols=25  Identities=32%  Similarity=0.588  Sum_probs=23.0

Q ss_pred             ccCCCCCCeEEcc-CCcEEEEecccc
Q 013370           61 HADPHPGNLRYTS-SGQIGFLDFGLL   85 (444)
Q Consensus        61 HADPHPGNILv~~-DGrLvlLDFGmv   85 (444)
                      =+|=||+||+++. +|+++-+|||.+
T Consensus       185 lgDRH~~NIll~~~tG~v~HIDfg~~  210 (280)
T cd05169         185 LGDRHPSNIMIDRLTGKVIHIDFGDC  210 (280)
T ss_pred             ccCCCcceEEEEcCCCCEEEEecHHH
Confidence            4899999999998 999999999975

TOR is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). TOR contains a rapamycin binding domain, a catalytic domain, and a FATC (FRAP, ATM and TRRAP, C-terminal) domain at the C-terminus. It is also called FRAP (FK506 binding protein 12-rapamycin associated protein). TOR is a central component of the eukaryotic growth regulatory network. It controls the expression of many genes transcribed by all three RNA polymerases. It associates with

>PF00454 PI3_PI4_kinase: Phosphatidylinositol 3- and 4-kinase; InterPro: IPR000403 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=87.77  E-value=0.32  Score=46.74  Aligned_cols=31  Identities=29%  Similarity=0.545  Sum_probs=22.0

Q ss_pred             cCccccCCCCCCeEE-ccCCcEEEEecccccc
Q 013370           57 TGILHADPHPGNLRY-TSSGQIGFLDFGLLCR   87 (444)
Q Consensus        57 ~GfFHADPHPGNILv-~~DGrLvlLDFGmv~~   87 (444)
                      +=+--+|=|||||++ ..+|+++-||||.+=.
T Consensus       134 yilg~gDRh~~Nili~~~~g~~~hIDfg~~f~  165 (235)
T PF00454_consen  134 YILGLGDRHPGNILIDKKTGELIHIDFGFIFG  165 (235)
T ss_dssp             HHHT-CS--TTTEEE-ETTSEEEE--HSSCTT
T ss_pred             EEEeecCCCchhheeccccceeeeEEeHHhhh
Confidence            334568999999999 7899999999999865

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Phosphatidylinositol 3-kinase (PI3-kinase) (2.7.1.137 from EC) [] is an enzyme that phosphorylates phosphoinositides on the 3-hydroxyl group of the inositol ring. The three products of PI3-kinase - PI-3-P, PI-3,4-P(2) and PI-3,4,5-P(3) function as secondary messengers in cell signalling. Phosphatidylinositol 4-kinase (PI4-kinase) (2.7.1.67 from EC) [] is an enzyme that acts on phosphatidylinositol (PI) in the first committed step in the production of the secondary messenger inositol-1'4'5'-trisphosphate. This domain is also present in a wide range of protein kinases, involved in diverse cellular functions, such as control of cell growth, regulation of cell cycle progression, a DNA damage checkpoint, recombination, and maintenance of telomere length. Despite significant homology to lipid kinases, no lipid kinase activity has been demonstrated for any of the PIK-related kinases []. The PI3- and PI4-kinases share a well conserved domain at their C-terminal section; this domain seems to be distantly related to the catalytic domain of protein kinases [, ]. The catalytic domain of PI3K has the typical bilobal structure that is seen in other ATP-dependent kinases, with a small N-terminal lobe and a large C-terminal lobe. The core of this domain is the most conserved region of the PI3Ks. The ATP cofactor binds in the crevice formed by the N-and C-terminal lobes, a loop between two strands provides a hydrophobic pocket for binding of the adenine moiety, and a lysine residue interacts with the alpha-phosphate. In contrast to protein kinases, the PI3K loop which interacts with the phosphates of the ATP and is known as the glycine-rich or P-loop, contains no glycine residues. Instead, contact with the ATP -phosphate is maintained through the side chain of a conserved serine residue.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 2WXL_A 4AJW_B 2WXQ_A 2WXP_A 2WXM_A 2WXH_A 2WXK_A 2WXG_A 2X38_A 2WXF_A ....

>KOG0903 consensus Phosphatidylinositol 4-kinase, involved in intracellular trafficking and secretion [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=87.69  E-value=0.76  Score=51.70  Aligned_cols=57  Identities=25%  Similarity=0.303  Sum_probs=44.5

Q ss_pred             CCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchh
Q 013370           24 SSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        24 i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~   91 (444)
                      -.+|..+|++-.    ..+|---+-||+-|+-       |=|-||||++.+|.|+=||||.|-.=+|.
T Consensus       673 S~~yk~AQrNFv----qSlagYSLvcYlLQvK-------DRHNGNILiD~EGHIIHIDFGFmLsnsPg  729 (847)
T KOG0903|consen  673 SEKYKSAQRNFV----QSLAGYSLVCYLLQVK-------DRHNGNILIDEEGHIIHIDFGFMLSNSPG  729 (847)
T ss_pred             cHHHHHHHHHHH----HHHHHHHHHHHhhhcc-------cccCCceEecCCCCEEEEeeeeEecCCCC
Confidence            345667777653    3566666778888874       88999999999999999999999776664

>cd05171 PIKKc_ATM Ataxia telangiectasia mutated (ATM), catalytic domain; The ATM catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=87.06  E-value=0.39  Score=48.19  Aligned_cols=25  Identities=20%  Similarity=0.454  Sum_probs=22.9

Q ss_pred             ccCCCCCCeEEc-cCCcEEEEecccc
Q 013370           61 HADPHPGNLRYT-SSGQIGFLDFGLL   85 (444)
Q Consensus        61 HADPHPGNILv~-~DGrLvlLDFGmv   85 (444)
                      =+|=||+||+++ .+|+++-+|||.+
T Consensus       185 lgDRh~~NIll~~~tG~v~hiDf~~~  210 (279)
T cd05171         185 LGDRHANNILIDEKTAEVVHIDLGIA  210 (279)
T ss_pred             cCCCCcccEEEEcCcCcEEEEechhh
Confidence            489999999998 5799999999996

ATM is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). ATM contains a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. ATM is critical in the response to DNA double strand breaks (DSBs) caused by radiation. It is activated at the site of a DSB and phosphorylates key substrates that trigger pathways that regulate DNA repair and cell cycle checkpoints at the G1/S, S phase, and G2/M transi

>cd05165 PI3Kc_I Phosphoinositide 3-kinase (PI3K), class I, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=87.01  E-value=0.38  Score=50.33  Aligned_cols=118  Identities=17%  Similarity=0.260  Sum_probs=64.2

Q ss_pred             cCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHhch
Q 013370           62 ADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEV  141 (444)
Q Consensus        62 ADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~~~  141 (444)
                      +|=|+|||+++++|++.=||||.+=.-.+                         ..+|+.++.+. -.+++++..+++..
T Consensus       217 gDRH~~NILi~~~G~l~HIDFG~ilg~~~-------------------------~~~~i~~E~~P-FkLT~emv~~mg~~  270 (366)
T cd05165         217 GDRHNDNIMVKETGQLFHIDFGHILGNYK-------------------------SKFGINRERVP-FVLTPDFVHVIGRG  270 (366)
T ss_pred             cccCCcceEEcCCCCEEEEehHHhhccCC-------------------------ccCCCCCCCCC-eeecHHHHHHhccc
Confidence            79999999999999999999998631111                         11233333322 34666776666542


Q ss_pred             hccCCCCc-ccHHHHHHHHHHHHHhCCcCCChHHHHHHHHHHHHHHHhhhcCCCCChHHhHHHHHHHHhhccCChH
Q 013370          142 EFKDGIPD-VKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLASLEGLAIAGDPHFKTFEAAYPFVIQKLLTENSVA  216 (444)
Q Consensus       142 ~~~~~l~~-~~f~~ll~~l~~l~~~~~~~vP~~~~li~Ral~~LEGla~~LDP~fdi~~~a~Pyv~r~Ll~~~s~~  216 (444)
                      ..+..... -.|.+...+.+.+++++.     ++++.+-+++.     ..--|++.-- ..-.|+.+++.-+.+.+
T Consensus       271 ~~~~~s~~f~~F~~~c~~a~~~LR~~~-----~~il~l~~lM~-----~s~ip~~~~~-~~i~~lr~rf~l~~se~  335 (366)
T cd05165         271 KKDNTSEHFQRFQDLCEKAYLALRRHG-----NLLIILFSMML-----MSGLPELTSK-EDIEYLRDTLALGKSEE  335 (366)
T ss_pred             CCcCCChhhhHHHHHHHHHHHHHHhCH-----HHHHHHHHHHh-----cCCCcccCch-hHHHHHHHHhCCCCCHH
Confidence            11111111 235556666666666543     22222222222     2223666642 34567777776665543

PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. In vitro, they can also phosphorylate the substrates P

>cd05170 PIKKc_SMG1 Suppressor of morphogenetic effect on genitalia-1 (SMG-1), catalytic domain; The SMG-1 catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=86.44  E-value=0.44  Score=48.53  Aligned_cols=25  Identities=20%  Similarity=0.425  Sum_probs=22.9

Q ss_pred             ccCCCCCCeEEc-cCCcEEEEecccc
Q 013370           61 HADPHPGNLRYT-SSGQIGFLDFGLL   85 (444)
Q Consensus        61 HADPHPGNILv~-~DGrLvlLDFGmv   85 (444)
                      =+|=||+||+++ .+|+++-+|||.+
T Consensus       213 lgDRh~~NIli~~~tG~v~hiDf~~~  238 (307)
T cd05170         213 LGDRHLDNVLIDLKTGEVVHIDYNVC  238 (307)
T ss_pred             CCCCCCccEEEEcCCCcEEEEeeHhh
Confidence            489999999999 6899999999985

SMG-1 is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). In addition to its catalytic domain, SMG-1 contains a FATC (FRAP, ATM and TRRAP, C-terminal) domain at the C-terminus. SMG-1 plays a critical role in the mRNA surveillance mechanism known as non-sense mediated mRNA decay (NMD). NMD protects the cells from the accumulation of aberrant mRNAs with premature termination codons (PTCs) generated by geno

>TIGR02457 TreS_Cterm trehalose synthase-fused probable maltokinase

Probab=86.16  E-value=0.78  Score=50.24  Aligned_cols=33  Identities=21%  Similarity=0.386  Sum_probs=25.5

Q ss_pred             cCc---cccCCCCCCeEEccCCcEEEEecc--cccccch
Q 013370           57 TGI---LHADPHPGNLRYTSSGQIGFLDFG--LLCRMER   90 (444)
Q Consensus        57 ~Gf---FHADPHPGNILv~~DGrLvlLDFG--mv~~L~~   90 (444)
                      .|.   +|+|.|.||++++.+| .++|||-  -...+++
T Consensus       376 ~~~k~RiHGD~HLgqvL~t~~d-~~IiDFEGEP~Rpl~E  413 (528)
T TIGR02457       376 DGLKIRIHGDFHLGQVLVVQDD-AVLIDFEGEPARPLAE  413 (528)
T ss_pred             CcceEeEecCcchhcEEEeCCC-eEEEcCCCCCCCChHH
Confidence            456   9999999999999876 5599993  4455544

Three pathways for the biosynthesis of trehalose, an osmoprotectant that in some species is also a precursor of certain cell wall glycolipids. Trehalose synthase, TreS, can interconvert maltose and trehalose, but while the equilibrium may favor trehalose, physiological concentrations of trehalose may be much greater than that of maltose and TreS may act largely in its degradation. This model describes a domain found only as a C-terminal fusion to TreS proteins. The most closely related proteins outside this family, Pep2 of Streptomyces coelicolor and Mak1 of Actinoplanes missouriensis, have known maltokinase activity. We suggest this domain acts as a maltokinase and helps drive conversion of trehalose to maltose.

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=85.53  E-value=1.3  Score=42.41  Aligned_cols=47  Identities=19%  Similarity=0.256  Sum_probs=37.5

Q ss_pred             HHHHHHHHHHHHHHcCccccCCCCCCeEEccC--C--cEEEEec-ccccccc
Q 013370           43 VNKGVEATLVQLLETGILHADPHPGNLRYTSS--G--QIGFLDF-GLLCRME   89 (444)
Q Consensus        43 a~~gv~a~L~QLl~~GfFHADPHPGNILv~~D--G--rLvlLDF-Gmv~~L~   89 (444)
                      ...+++-+.+.+++++++..|++|+||++..+  |  +++++|- |.-.-++
T Consensus       123 ~~~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~~~~~lvlIDG~G~~~~ip  174 (199)
T PF10707_consen  123 LRQALDEFKRYLLDHHIVIRDLNPHNIVVQRRDSGEFRLVLIDGLGEKELIP  174 (199)
T ss_pred             HHHHHHHHHHHHHHcCCeecCCCcccEEEEecCCCceEEEEEeCCCCccccc
Confidence            45667788899999999999999999999854  2  7999994 6554443

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>cd05177 PI3Kc_C2_gamma Phosphoinositide 3-kinase (PI3K), class II, gamma isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=85.47  E-value=0.52  Score=49.15  Aligned_cols=26  Identities=35%  Similarity=0.544  Sum_probs=24.2

Q ss_pred             cCCCCCCeEEccCCcEEEEecccccc
Q 013370           62 ADPHPGNLRYTSSGQIGFLDFGLLCR   87 (444)
Q Consensus        62 ADPHPGNILv~~DGrLvlLDFGmv~~   87 (444)
                      +|=|+||||++++|++.=||||.+=.
T Consensus       208 gDRHn~NILi~~~G~~~HIDFG~ilg  233 (354)
T cd05177         208 CDRHNDNIMLTHSGHMFHIDFGKFLG  233 (354)
T ss_pred             cCcCCCceeEcCCCCEEEEehHHhcC
Confidence            79999999999999999999998744

PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class II PI3Ks preferentially use PtdIns as a substrate to produce PtdIns(3)P, but can also phosphorylate PtdIns(4)P. They function as monomers and do n

>KOG0906 consensus Phosphatidylinositol 3-kinase VPS34, involved in signal transduction [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=85.43  E-value=0.26  Score=54.48  Aligned_cols=79  Identities=16%  Similarity=0.203  Sum_probs=45.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHc-----CccccCCCCCCeEEccCC
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLET-----GILHADPHPGNLRYTSSG   75 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~-----GfFHADPHPGNILv~~DG   75 (444)
                      ||||+|.+++.+.+...+     |..|.++.+.+-.. ...+.-...+.|.+.+-.+     =+=-||=|++|+++++||
T Consensus       639 vefI~s~~la~Ils~~~~-----I~~ylke~~p~e~a-p~gi~~~v~dnfVkScaGYsVitYILGvGDRhldNLllT~dG  712 (843)
T KOG0906|consen  639 VEFIPSKPLARILSEYHS-----ILMYLKEDRPDENA-PFGISPEVMDNFVKSCAGYSVITYILGVGDRHLDNLLLTKDG  712 (843)
T ss_pred             EEeecCCcHHHHHHHHHH-----HHHHHHhhCCCcCC-CCCCChhHHHHHHHhhccceeeeeeecccCCCcCceEEccCC
Confidence            689999999988876432     22333332222100 0001111222233332211     122489999999999999


Q ss_pred             cEEEEecccc
Q 013370           76 QIGFLDFGLL   85 (444)
Q Consensus        76 rLvlLDFGmv   85 (444)
                      ++-=+|||.+
T Consensus       713 k~FHiDFgyI  722 (843)
T KOG0906|consen  713 KLFHIDFGYI  722 (843)
T ss_pred             cEEEEeeeee
Confidence            9999999976

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=85.36  E-value=0.23  Score=53.67  Aligned_cols=36  Identities=28%  Similarity=0.644  Sum_probs=33.8

Q ss_pred             cCccccCCCCCCeEEccCCcEEEEecccccccchhh
Q 013370           57 TGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKH   92 (444)
Q Consensus        57 ~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~   92 (444)
                      -|++|.|.+|+||+...|+++.+.|||++...+...
T Consensus       375 k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~  410 (516)
T KOG1033|consen  375 KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDE  410 (516)
T ss_pred             ccchhhhccccccccccchhhhhhhhhheeecccCC
Confidence            899999999999999999999999999999988765

>cd05174 PI3Kc_IA_delta Phosphoinositide 3-kinase (PI3K), class IA, delta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=85.36  E-value=0.53  Score=49.19  Aligned_cols=24  Identities=38%  Similarity=0.628  Sum_probs=23.0

Q ss_pred             cCCCCCCeEEccCCcEEEEecccc
Q 013370           62 ADPHPGNLRYTSSGQIGFLDFGLL   85 (444)
Q Consensus        62 ADPHPGNILv~~DGrLvlLDFGmv   85 (444)
                      +|=|+|||+++++|++.=||||.+
T Consensus       213 GDRHn~NILi~~~G~l~HIDFG~i  236 (361)
T cd05174         213 GDRHSDNIMIRESGQLFHIDFGHF  236 (361)
T ss_pred             cCcCccceeEcCCCCEEEEehHHh
Confidence            799999999999999999999985

PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. Class I enzymes are heterodimers and exist in multiple isoforms consisting of one catalytic subunit (out of four isoforms) and one of several regulatory subunits. They are further classified into class IA (alpha, beta and

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=84.77  E-value=1.4  Score=41.55  Aligned_cols=49  Identities=16%  Similarity=0.237  Sum_probs=36.2

Q ss_pred             HHHHHHHHHHHHHHHH---cCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           41 DLVNKGVEATLVQLLE---TGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~---~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      ++|..+++. +..+..   +.|+-+|.+|+|+-++.+|++.++|...+...+.
T Consensus        63 ~iA~~lL~~-l~~l~~~~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~~~  114 (188)
T PF12260_consen   63 KIALQLLEL-LEELDHGPLGFFYLCDVSPDNFGVNDDGRLKLIDLDDVFVEDK  114 (188)
T ss_pred             HHHHHHHHH-HHHHhcCCCCcEEEeecchHHeEEeCCCcEEEEechhcchhHH
Confidence            444444443 333433   3477899999999999999999999999877654

Proteins in this uncharacterised family are described as transmembrane proteins.

>PTZ00303 phosphatidylinositol kinase; Provisional

Probab=84.59  E-value=0.67  Score=52.26  Aligned_cols=26  Identities=27%  Similarity=0.543  Sum_probs=24.2

Q ss_pred             cCCCCCCeEEccCCcEEEEecccccc
Q 013370           62 ADPHPGNLRYTSSGQIGFLDFGLLCR   87 (444)
Q Consensus        62 ADPHPGNILv~~DGrLvlLDFGmv~~   87 (444)
                      +|=|.||||++++|++.=||||.+-.
T Consensus      1150 gDRHngNILId~dGhLfHIDFGFILg 1175 (1374)
T PTZ00303       1150 GDRHKGNVLIGTNGALLHIDFRFIFS 1175 (1374)
T ss_pred             CcccCCceeEcCCCCEEEEecceeec
Confidence            79999999999999999999999843

>COG3281 Ble Uncharacterized protein, probably involved in trehalose biosynthesis [Carbohydrate transport and metabolism]

Probab=84.45  E-value=0.54  Score=48.96  Aligned_cols=23  Identities=35%  Similarity=0.605  Sum_probs=21.9

Q ss_pred             cccCCCCCCeEEccCCcEEEEecc
Q 013370           60 LHADPHPGNLRYTSSGQIGFLDFG   83 (444)
Q Consensus        60 FHADPHPGNILv~~DGrLvlLDFG   83 (444)
                      +|+|.|-|.+++++ |+..+|||-
T Consensus       287 vHGDLHLgQVLvt~-g~~~liDFE  309 (438)
T COG3281         287 VHGDLHLGQVLVTP-GRALLIDFE  309 (438)
T ss_pred             HhccceehheeeeC-CcEEEEecC
Confidence            79999999999999 999999993

>cd05175 PI3Kc_IA_alpha Phosphoinositide 3-kinase (PI3K), class IA, alpha isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=84.02  E-value=0.65  Score=48.61  Aligned_cols=25  Identities=32%  Similarity=0.550  Sum_probs=23.6

Q ss_pred             cCCCCCCeEEccCCcEEEEeccccc
Q 013370           62 ADPHPGNLRYTSSGQIGFLDFGLLC   86 (444)
Q Consensus        62 ADPHPGNILv~~DGrLvlLDFGmv~   86 (444)
                      +|=|+|||+++.+|++.=||||.+=
T Consensus       216 gDRHndNImi~~~G~l~HIDFG~iL  240 (366)
T cd05175         216 GDRHNSNIMVKDDGQLFHIDFGHFL  240 (366)
T ss_pred             cccCccceeEcCCCCEEEEehHHhh
Confidence            7999999999999999999999873

PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. Class I enzymes are heterodimers and exist in multiple isoforms consisting of one catalytic subunit (out of four isoforms) and one of several regulatory subunits. They are further classified into class IA (alpha, beta and

>COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases [General function prediction only]

Probab=83.95  E-value=1  Score=46.24  Aligned_cols=27  Identities=37%  Similarity=0.667  Sum_probs=24.6

Q ss_pred             HcCccccCCCCCCeEEccC----CcEEEEec
Q 013370           56 ETGILHADPHPGNLRYTSS----GQIGFLDF   82 (444)
Q Consensus        56 ~~GfFHADPHPGNILv~~D----GrLvlLDF   82 (444)
                      +..++|+|-||-|++.+.+    +++++|||
T Consensus       199 ~~vlvhRDfh~~NLmw~~~~~g~~rvGvlDF  229 (351)
T COG3178         199 PKVLVHRDFHSRNLMWTADRAGADRVGVLDF  229 (351)
T ss_pred             CceeeeccccCccceecCCccCCCCCceeeh
Confidence            4689999999999999987    59999999

>cd00894 PI3Kc_IB_gamma Phosphoinositide 3-kinase (PI3K), class IB, gamma isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=83.76  E-value=0.67  Score=48.48  Aligned_cols=24  Identities=33%  Similarity=0.621  Sum_probs=23.0

Q ss_pred             cCCCCCCeEEccCCcEEEEecccc
Q 013370           62 ADPHPGNLRYTSSGQIGFLDFGLL   85 (444)
Q Consensus        62 ADPHPGNILv~~DGrLvlLDFGmv   85 (444)
                      +|=|+|||+++++|++.=||||.+
T Consensus       217 gDRHndNImi~~~G~lfHIDFG~i  240 (365)
T cd00894         217 GDRHNDNIMITETGNLFHIDFGHI  240 (365)
T ss_pred             cCccccceeEcCCCCEEEEeeHHh
Confidence            799999999999999999999986

PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. Class I enzymes are heterodimers and exist in multiple isoforms consisting of one catalytic subunit (out of four isoforms) and one of several regulatory subunits. They are further classified into class IA (alpha, beta and

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	444
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-05
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	1e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.8 bits (105), Expect = 5e-05
 Identities = 51/307 (16%), Positives = 92/307 (29%), Gaps = 91/307 (29%)

Query: 133 DLEDALGEV----EFKD--GIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLASLEG 186
           D++D    +    E        D   S  L   W++  K   +       V   L     
Sbjct: 37  DVQDMPKSILSKEEIDHIIMSKDAV-SGTLRLFWTLLSK---QEEMVQKFVEEVL----- 87

Query: 187 LAIAGDPHFKTFEAAYPFVIQKLLTENSVATRKILHSVVFNKKKEFQWQRLSLFLRVGAT 246
                          Y F++  + TE    +            + +  QR  L+      
Sbjct: 88  ------------RINYKFLMSPIKTEQRQPSMM---------TRMYIEQRDRLY------ 120

Query: 247 RKGLQQVIAPKTETTLDYLPNRVGVFDAANLVLRLLRTNNGVVLRRLLMTADGASLIRAF 306
                QV A        Y  +R+  +      L  LR    V++    +   G + +   
Sbjct: 121 --NDNQVFAK-------YNVSRLQPYLKLRQALLELRPAKNVLIDG--VLGSGKTWVALD 169

Query: 307 VSKEASFFRHELCRVIADALYQWMCEALGR-GIPVTRSSQL----RVAGGSDNRELEPSS 361
           V        +++   +   ++ W+   L     P T    L         +     + SS
Sbjct: 170 VCLS-----YKVQCKMDFKIF-WL--NLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSS 221

Query: 362 GLSATIYDYQSFLKDRRLKVIFSK-------ILDPVRRDPVLMLRLCWAAFVMLVKASAL 414
            +   I+  Q+ L  RRL  + SK       +L  V ++        W AF        L
Sbjct: 222 NIKLRIHSIQAEL--RRL--LKSKPYENCLLVLLNV-QNAK-----AWNAF-------NL 264

Query: 415 ACQRMLV 421
           +C ++L+
Sbjct: 265 SC-KILL 270

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* Length = 339

 Score = 43.1 bits (101), Expect = 1e-04
 Identities = 14/72 (19%), Positives = 26/72 (36%)

Query: 28  LDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCR 87
              Q   A  RL+D   K  +     L +  + H+D H GN+   +   I  +D+     
Sbjct: 177 FFNQNSAAIHRLVDTSEKLSKKIQPDLDKYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236

Query: 88  MERKHQFAMLAS 99
             ++     +  
Sbjct: 237 APKERDLMFIGG 248

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	444
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.06
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.04
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.02
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.02
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	98.91
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	98.91
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	98.9
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	98.86
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	98.85
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	98.83
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	98.82
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	98.81
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	98.8
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	98.79
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	98.79
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	98.77
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	98.76
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.75
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.74
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	98.73
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	98.72
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	98.72
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	98.69
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	98.69
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	98.68
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	98.67
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	98.67
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	98.66
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	98.65
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	98.65
4aoj_A	329	High affinity nerve growth factor receptor; transf	98.64
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	98.64
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	98.62
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	98.62
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	98.61
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	98.61
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	98.6
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	98.6
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	98.59
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	98.58
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	98.58
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	98.58
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	98.58
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	98.57
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	98.57
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	98.56
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	98.56
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	98.56
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	98.56
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	98.55
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	98.54
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	98.54
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	98.54
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	98.54
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	98.53
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	98.53
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	98.52
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.52
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	98.52
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	98.51
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	98.51
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	98.51
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	98.51
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	98.51
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	98.51
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	98.5
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	98.5
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	98.49
3ork_A	311	Serine/threonine protein kinase; structural genomi	98.49
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	98.49
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	98.49
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	98.49
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	98.49
3pls_A	298	Macrophage-stimulating protein receptor; protein k	98.48
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	98.48
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	98.48
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	98.48
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	98.48
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	98.47
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	98.47
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	98.47
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	98.47
3soc_A	322	Activin receptor type-2A; structural genomics cons	98.46
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	98.46
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	98.46
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	98.45
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	98.45
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	98.45
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	98.45
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	98.45
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	98.45
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	98.45
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	98.44
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	98.44
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	98.44
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	98.44
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	98.44
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	98.43
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	98.43
3bhy_A	283	Death-associated protein kinase 3; death associate	98.43
2a19_B	284	Interferon-induced, double-stranded RNA-activated	98.43
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	98.43
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	98.43
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	98.42
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	98.42
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	98.42
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	98.42
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	98.41
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	98.41
3q4u_A	301	Activin receptor type-1; structural genomics conso	98.41
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	98.4
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	98.4
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	98.4
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	98.4
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	98.4
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	98.39
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	98.39
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	98.39
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	98.38
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	98.38
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	98.38
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	98.37
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	98.36
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	98.36
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	98.36
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	98.36
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	98.36
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	98.36
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	98.35
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	98.35
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	98.35
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	98.34
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	98.34
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	98.34
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	98.34
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	98.34
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	98.33
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	98.33
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	98.33
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	98.32
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	98.32
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	98.32
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	98.32
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	98.32
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	98.32
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	98.32
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	98.31
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	98.31
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	98.31
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	98.31
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	98.31
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	98.31
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	98.31
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	98.3
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	98.3
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	98.29
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	98.29
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	98.29
3uqc_A	286	Probable conserved transmembrane protein; structur	98.29
3o0g_A	292	Cell division protein kinase 5; kinase activator c	98.29
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	98.29
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	98.29
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	98.29
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	98.28
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	98.28
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	98.28
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	98.28
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	98.28
3rp9_A	458	Mitogen-activated protein kinase; structural genom	98.27
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	98.27
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	98.27
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	98.27
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	98.27
3an0_A	340	Dual specificity mitogen-activated protein kinase;	98.26
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	98.26
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	98.26
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	98.26
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	98.26
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	98.26
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	98.25
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	98.25
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	98.24
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	98.24
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	98.24
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	98.24
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	98.23
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	98.23
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	98.22
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	98.22
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	98.22
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	98.22
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	98.21
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	98.2
3niz_A	311	Rhodanese family protein; structural genomics, str	98.2
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	98.2
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	98.2
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	98.19
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	98.19
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	98.19
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	98.18
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	98.18
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	98.18
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	98.18
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	98.17
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	98.17
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	98.17
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	98.17
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	98.17
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	98.16
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	98.16
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	98.14
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	98.14
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	98.14
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	98.13
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	98.13
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	98.12
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	98.12
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	98.12
3fme_A	290	Dual specificity mitogen-activated protein kinase;	98.11
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	98.11
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	98.1
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	98.09
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	98.09
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	98.09
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	98.09
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	98.08
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	98.07
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	98.05
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.05
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	98.03
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	98.03
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	98.02
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	98.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	98.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	97.99
3aln_A	327	Dual specificity mitogen-activated protein kinase;	97.99
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	97.99
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	97.98
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	97.98
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	97.97
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	97.96
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	97.95
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	97.95
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	97.93
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	97.92
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	97.89
2dyl_A	318	Dual specificity mitogen-activated protein kinase	97.87
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	97.84
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	97.83
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	97.83
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	97.82
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	97.8
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	97.75
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	97.75
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	97.74
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	97.74
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	97.73
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	97.64
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	97.51
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	97.4
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	97.12
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	96.82
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	96.79
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	96.54
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	96.5
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	96.46
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	96.42
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	96.27
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	96.26
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	96.14
3ats_A	357	Putative uncharacterized protein; hypothetical pro	96.06
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	95.8
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	95.72
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	95.52
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	95.16
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	95.15
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	94.05
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	93.87
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	93.55
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	92.34
3mes_A	424	Choline kinase; malaria, structural genomics, stru	91.05
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	90.12
2x6h_A	696	GH13170P, VPS34, phosphotidylinositol 3 kinase 59F	86.86
3ls8_A	614	Phosphatidylinositol 3-kinase catalytic subunit ty	86.55
2y3a_A	1092	Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca	81.67
2wxf_A	940	Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca	80.84
1e7u_A	961	Phosphatidylinositol 3-kinase catalytic subunit; p	80.26
3hhm_A	1091	Phosphatidylinositol-4,5-bisphosphate 3-kinase cat	80.24

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.06  E-value=1.9e-10  Score=114.41  Aligned_cols=132  Identities=14%  Similarity=0.113  Sum_probs=82.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+++.....++        +.       ....++..++.+ +..+|..|++|+|++|.|||++.+|++.++
T Consensus       105 mEy~~gg~L~~~l~~~~~l~--------e~-------~~~~~~~qi~~a-L~ylH~~~IiHRDlKp~NILl~~~g~vKl~  168 (304)
T 3ubd_A          105 LDFLRGGDLFTRLSKEVMFT--------EE-------DVKFYLAELALA-LDHLHSLGIIYRDLKPENILLDEEGHIKLT  168 (304)
T ss_dssp             ECCCTTCEEHHHHHHHCCCC--------HH-------HHHHHHHHHHHH-HHHHHHTTCCCSSCCGGGEEECTTSCEEEE
T ss_pred             EEcCCCCCHHHHHHhcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCCcCCCCCHHHeEEcCCCCEEec
Confidence            89999999999886543332        11       123455555554 888999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHH-HHHHHHhcCCCCCCCChHHHHHHHHHHHhchhccCCCCcccHHHHHHH
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQS-LVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGK  158 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~-la~~l~~lG~l~~~~d~~~~~~~L~~~l~~~~~~~~l~~~~f~~ll~~  158 (444)
                      |||+...+........      -..+...- ..|.+..-+ ..+..|++++.--+..++...   .+....+..+++..
T Consensus       169 DFGla~~~~~~~~~~~------~~~GT~~YmAPE~~~~~~-y~~~~DiwSlGvilyemltG~---~PF~~~~~~~~~~~  237 (304)
T 3ubd_A          169 DFGLSKESIDHEKKAY------SFCGTVEYMAPEVVNRRG-HTQSADWWSFGVLMFEMLTGT---LPFQGKDRKETMTM  237 (304)
T ss_dssp             SSEEEEC-----CCCC------SCCCCGGGCCHHHHHTSC-CCTHHHHHHHHHHHHHHHHSS---CSSCCSSHHHHHHH
T ss_pred             ccccceeccCCCcccc------ccccCcccCCHHHhccCC-CCCCCcccchHHHHHHHHhCC---CCCCCcCHHHHHHH
Confidence            9999987644322110      01122222 245444433 345678888877777766532   33444444444443

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.04  E-value=4.4e-10  Score=113.89  Aligned_cols=136  Identities=17%  Similarity=0.170  Sum_probs=86.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+++....+..      +++.+       ...++..++.+ +..+|..|++|+|++|.|||++.+|.+.++
T Consensus       102 mEy~~gg~L~~~i~~~~~~~------~~e~~-------~~~~~~qi~~a-L~ylH~~~IiHRDlKp~NILl~~~g~vKl~  167 (350)
T 4b9d_A          102 MDYCEGGDLFKRINAQKGVL------FQEDQ-------ILDWFVQICLA-LKHVHDRKILHRDIKSQNIFLTKDGTVQLG  167 (350)
T ss_dssp             EECCTTCBHHHHHHHTTTCC------CCHHH-------HHHHHHHHHHH-HHHHHHTTCEETTCCGGGEEECTTCCEEEC
T ss_pred             EeCCCCCcHHHHHHHcCCCC------CCHHH-------HHHHHHHHHHH-HHHHHHCCeeeccCCHHHEEECCCCCEEEc
Confidence            89999999999886543221      11111       22455555555 888999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHhchhccCCCCcccHHHHHHHH
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKI  159 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~~~~~~~~l~~~~f~~ll~~l  159 (444)
                      |||+...+.......  ..++  -.-.|. ..|.+..-+ .++..|++.+.--+..++...   .+....+..+++.++
T Consensus       168 DFGla~~~~~~~~~~--~~~~--GT~~Ym-APE~l~~~~-y~~~~DiwSlGvilyemltG~---~PF~~~~~~~~~~~i  237 (350)
T 4b9d_A          168 DFGIARVLNSTVELA--RACI--GTPYYL-SPEICENKP-YNNKSDIWALGCVLYELCTLK---HAFEAGSMKNLVLKI  237 (350)
T ss_dssp             STTEESCCCHHHHHH--HHHH--SCCTTC-CHHHHTTCC-CCHHHHHHHHHHHHHHHHHSS---CSCCCSSHHHHHHHH
T ss_pred             ccccceeecCCcccc--cccC--CCcccc-CHHHHCCCC-CCcHHHHHHHHHHHHHHHHCC---CCCCCcCHHHHHHHH
Confidence            999999887643221  1111  112222 245554433 344578888877777766432   334444554544443

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.02  E-value=1.8e-10  Score=115.08  Aligned_cols=135  Identities=18%  Similarity=0.123  Sum_probs=86.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.++......++        +.       ....++..++.+ +..+|..|++|+|++|.|||++.+|.+.++
T Consensus       111 mEy~~gG~L~~~i~~~~~l~--------e~-------~~~~~~~qi~~a-l~ylH~~~IiHRDlKPeNILl~~~g~vKl~  174 (311)
T 4aw0_A          111 LSYAKNGELLKYIRKIGSFD--------ET-------CTRFYTAEIVSA-LEYLHGKGIIHRDLKPENILLNEDMHIQIT  174 (311)
T ss_dssp             ECCCTTEEHHHHHHHHSSCC--------HH-------HHHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEECTTSCEEEC
T ss_pred             EecCCCCCHHHHHHHcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCCccCCCCHHHeEEcCCCCEEEE
Confidence            89999999999876543332        11       123455555555 889999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHH-HHHHHHhcCCCCCCCChHHHHHHHHHHHhchhccCCCCcccHHHHHHHH
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQS-LVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKI  159 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~-la~~l~~lG~l~~~~d~~~~~~~L~~~l~~~~~~~~l~~~~f~~ll~~l  159 (444)
                      |||+...++++........    ..+...- ..|.+..-++ .+..|.+.+.--+..++...   .+...-+..+++.++
T Consensus       175 DFGla~~~~~~~~~~~~~~----~~GTp~YmAPEvl~~~~y-~~~~DiWSlGvilyeml~G~---~PF~~~~~~~~~~~i  246 (311)
T 4aw0_A          175 DFGTAKVLSPESKQARANS----FVGTAQYVSPELLTEKSA-CKSSDLWALGCIIYQLVAGL---PPFRAGNEGLIFAKI  246 (311)
T ss_dssp             CCTTCEECCTTTTCCCBCC----CCSCGGGCCHHHHHHSCB-CHHHHHHHHHHHHHHHHHSS---CSSCCSSHHHHHHHH
T ss_pred             EcCCceecCCCCCcccccC----cccCcccCCHHHHcCCCC-CcHHHHHHHHHHHHHHHhCC---CCCCCCCHHHHHHHH
Confidence            9999998875433221110    0121111 2454544333 44578888777777766542   233334444444443

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.02  E-value=8.9e-10  Score=107.95  Aligned_cols=132  Identities=15%  Similarity=0.126  Sum_probs=79.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++ +.+.+.......++        +.       ....++..++.+ ++.+|..|++|+|++|.||+++.+|++.++
T Consensus        92 mEy~~-g~L~~~l~~~~~l~--------e~-------~~~~~~~qi~~a-l~ylH~~~IiHRDiKP~NILl~~~~~vkl~  154 (275)
T 3hyh_A           92 IEYAG-NELFDYIVQRDKMS--------EQ-------EARRFFQQIISA-VEYCHRHKIVHRDLKPENLLLDEHLNVKIA  154 (275)
T ss_dssp             EECCC-EEHHHHHHHSCSCC--------HH-------HHHHHHHHHHHH-HHHHHHTTCCCCCCCTTTEEECTTCCEEEC
T ss_pred             EeCCC-CCHHHHHHHcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCcccccCChHHeEECCCCCEEEe
Confidence            89995 46666654332222        11       123556666655 788999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHhchhccCCCCcccHHHHHHH
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGK  158 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~~~~~~~~l~~~~f~~ll~~  158 (444)
                      |||+...+++.....   ..  .-+..|. ..|.+..-+..++..|++++.--+..++...   .+...-+...+...
T Consensus       155 DFGla~~~~~~~~~~---~~--~GT~~Y~-APE~~~~~~y~~~~~DiwSlGvily~lltg~---~PF~~~~~~~~~~~  223 (275)
T 3hyh_A          155 DFGLSNIMTDGNFLK---TS--CGSPNYA-APEVISGKLYAGPEVDVWSCGVILYVMLCRR---LPFDDESIPVLFKN  223 (275)
T ss_dssp             CSSCC--------------------CTTS-CHHHHSSSSCCCTHHHHHHHHHHHHHHHHSS---CSSCCSSHHHHHHH
T ss_pred             ecCCCeecCCCCccC---Ce--eECcccC-ChhhhcCCCCCCChhhhHHHHHHHHHHHHCC---CCCCCCCHHHHHHH
Confidence            999998776543221   11  1122332 3566665555556688998887777776542   23344444444443

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=98.91  E-value=1e-09  Score=109.71  Aligned_cols=76  Identities=24%  Similarity=0.364  Sum_probs=59.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|++|.++......++        ..       ....++..++.+ +..++..|++|+|+||+||+++++|++.++
T Consensus       179 ~e~~~g~~L~~~l~~~~~l~--------~~-------~~~~i~~qi~~~-L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~  242 (365)
T 2y7j_A          179 FDLMRKGELFDYLTEKVALS--------EK-------ETRSIMRSLLEA-VSFLHANNIVHRDLKPENILLDDNMQIRLS  242 (365)
T ss_dssp             ECCCTTCBHHHHHHHHSSCC--------HH-------HHHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEECTTCCEEEC
T ss_pred             EEeCCCCcHHHHHHhcCCCC--------HH-------HHHHHHHHHHHH-HHHHHhCCeecCCCCHHHEEECCCCCEEEE
Confidence            79999999999876432222        11       123455555554 788999999999999999999999999999


Q ss_pred             ecccccccchhh
Q 013370           81 DFGLLCRMERKH   92 (444)
Q Consensus        81 DFGmv~~L~~~~   92 (444)
                      |||+++.+++..
T Consensus       243 DfG~~~~~~~~~  254 (365)
T 2y7j_A          243 DFGFSCHLEPGE  254 (365)
T ss_dssp             CCTTCEECCTTC
T ss_pred             ecCcccccCCCc
Confidence            999999887643

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=98.91  E-value=6.2e-10  Score=119.03  Aligned_cols=72  Identities=19%  Similarity=0.333  Sum_probs=57.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      ||||+|..|.|++......+              .    .+++..++.+ +..+|..|++|+|+||+|||++.||++.++
T Consensus       321 MEyv~G~~L~d~i~~~~~l~--------------~----~~I~~QIl~A-L~ylH~~GIIHRDIKPeNILL~~dg~vKL~  381 (569)
T 4azs_A          321 MEKLPGRLLSDMLAAGEEID--------------R----EKILGSLLRS-LAALEKQGFWHDDVRPWNVMVDARQHARLI  381 (569)
T ss_dssp             EECCCSEEHHHHHHTTCCCC--------------H----HHHHHHHHHH-HHHHHHTTCEESCCCGGGEEECTTSCEEEC
T ss_pred             EecCCCCcHHHHHHhCCCCC--------------H----HHHHHHHHHH-HHHHHHCCceeccCchHhEEECCCCCEEEe
Confidence            99999999999986432111              1    1345555554 889999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+.+.+...
T Consensus       382 DFGlAr~~~~~  392 (569)
T 4azs_A          382 DFGSIVTTPQD  392 (569)
T ss_dssp             CCTTEESCC--
T ss_pred             ecccCeeCCCC
Confidence            99999887653

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=98.90  E-value=9.9e-10  Score=110.73  Aligned_cols=121  Identities=19%  Similarity=0.197  Sum_probs=75.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCC-cEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG-QIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DG-rLvl   79 (444)
                      |||++|+.|.+++.....++        +.+       ...++..++.+ +..+|..|++|+|++|.|||++.+| ++.+
T Consensus       129 mEy~~gg~L~~~l~~~~~l~--------e~~-------~~~~~~qi~~a-L~ylH~~~IiHRDlKp~NILl~~~g~~vKl  192 (336)
T 4g3f_A          129 MELLEGGSLGQLIKQMGCLP--------EDR-------ALYYLGQALEG-LEYLHTRRILHGDVKADNVLLSSDGSRAAL  192 (336)
T ss_dssp             ECCCTTCBHHHHHHHHSSCC--------HHH-------HHHHHHHHHHH-HHHHHTTTEECSCCCGGGEEECTTSCCEEE
T ss_pred             EeccCCCcHHHHHHHcCCCC--------HHH-------HHHHHHHHHHH-HHHHHHCCceecccCHHHEEEeCCCCEEEE
Confidence            89999999999986543232        111       23455555555 8899999999999999999999998 6999


Q ss_pred             EecccccccchhhHHh-HHHHHHHHHhCCHHH-HHHHHHhcCCCCCCCChHHHHHHHHHHHhc
Q 013370           80 LDFGLLCRMERKHQFA-MLASIVHIVNGDWQS-LVHSLTEMDVVRPGTNTLRVTMDLEDALGE  140 (444)
Q Consensus        80 LDFGmv~~L~~~~R~~-l~~ll~alv~~D~~~-la~~l~~lG~l~~~~d~~~~~~~L~~~l~~  140 (444)
                      +|||+...+.+..... ...  ...+.+...- ..|.+..-+ .++..|++.+.--+..++..
T Consensus       193 ~DFGla~~~~~~~~~~~~~~--~~~~~GT~~YmAPE~~~~~~-y~~~~DiwSlGvilyemltG  252 (336)
T 4g3f_A          193 CDFGHALCLQPDGLGKSLLT--GDYIPGTETHMAPEVVMGKP-CDAKVDIWSSCCMMLHMLNG  252 (336)
T ss_dssp             CCCTTCEEC--------------CCCCCCGGGCCHHHHTTCC-CCTHHHHHHHHHHHHHHHHS
T ss_pred             eeCCCCeEccCCCcccceec--CCccccCccccCHHHHCCCC-CCcHHHHHHHHHHHHHHHHC
Confidence            9999999886643211 100  0001122211 245554322 34557888877777766643

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=98.86  E-value=3.6e-09  Score=104.63  Aligned_cols=133  Identities=14%  Similarity=0.128  Sum_probs=84.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.+.+........+        +.       ....++..++.+ +..+|..|++|+|++|.||+++.+|++.++
T Consensus        93 ~e~~~~~~L~~~l~~~~~l~--------~~-------~~~~~~~qi~~a-l~~lH~~~ivHrDlkp~NIll~~~~~~kl~  156 (328)
T 3fe3_A           93 MEYASGGEVFDYLVAHGRMK--------EK-------EARSKFRQIVSA-VQYCHQKRIVHRDLKAENLLLDADMNIKIA  156 (328)
T ss_dssp             ECCCTTCBHHHHHHHHCCCC--------HH-------HHHHHHHHHHHH-HHHHHHTTCCCSCCCGGGEEECTTSCEEEC
T ss_pred             EECCCCCcHHHHHHHcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCEeccCCCHHHEEEcCCCCEEEe
Confidence            79999999998876443222        11       123455555555 888999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCC-HHHHHHHHHhcCCCCCCCChHHHHHHHHHHHhchhccCCCCcccHHHHHHHH
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGD-WQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKI  159 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D-~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~~~~~~~~l~~~~f~~ll~~l  159 (444)
                      |||+...++......-       ..+. +....+.+..-....+..|++.+.--+..++..   ..+....+..++...+
T Consensus       157 DFG~a~~~~~~~~~~~-------~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g---~~pf~~~~~~~~~~~i  226 (328)
T 3fe3_A          157 DFGFSNEFTVGGKLDA-------FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG---SLPFDGQNLKELRERV  226 (328)
T ss_dssp             STTCCGGGSSSCGGGT-------TSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHS---SCSSCCSSHHHHHHHH
T ss_pred             eccCceecCCCCcccc-------ccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhC---CCCCCCCCHHHHHHHH
Confidence            9999987765432110       0011 112245554444334456788777666666543   2234444555444433

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=98.85  E-value=2e-09  Score=109.01  Aligned_cols=114  Identities=17%  Similarity=0.328  Sum_probs=78.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.++..- .+++        ++       ....++..++.+ +..+|..|++|+|++|.|||++.+|++.+.
T Consensus       150 mEy~~gg~L~~~l~~-~~l~--------e~-------~~~~~~~qi~~a-L~ylH~~~IiHRDlKp~NILl~~~g~vKl~  212 (346)
T 4fih_A          150 MEFLEGGALTDIVTH-TRMN--------EE-------QIAAVCLAVLQA-LSVLHAQGVIHRDIKSDSILLTHDGRVKLS  212 (346)
T ss_dssp             ECCCTTEEHHHHHHH-SCCC--------HH-------HHHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEECTTCCEEEC
T ss_pred             EeCCCCCcHHHHHHc-CCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCcccccCCHHHEEECCCCCEEEe
Confidence            899999999998753 2222        11       123455555554 889999999999999999999999999999


Q ss_pred             ecccccccchhhH--HhHHHHHHHHHhCCHH-HHHHHHHhcCCCCCCCChHHHHHHHHHHHhc
Q 013370           81 DFGLLCRMERKHQ--FAMLASIVHIVNGDWQ-SLVHSLTEMDVVRPGTNTLRVTMDLEDALGE  140 (444)
Q Consensus        81 DFGmv~~L~~~~R--~~l~~ll~alv~~D~~-~la~~l~~lG~l~~~~d~~~~~~~L~~~l~~  140 (444)
                      |||+...+..+..  ..++        +... ...|.+..-++ .+..|++.+.--+..++..
T Consensus       213 DFGla~~~~~~~~~~~~~~--------GTp~YmAPEvl~~~~y-~~~~DiWSlGvilyeml~G  266 (346)
T 4fih_A          213 DFGFCAQVSKEVPRRKSLV--------GTPYWMAPELISRLPY-GPEVDIWSLGIMVIEMVDG  266 (346)
T ss_dssp             CCTTCEECCSSSCCBCCCC--------SCGGGCCHHHHTTCCB-CTHHHHHHHHHHHHHHHHS
T ss_pred             cCcCceecCCCCCcccccc--------cCcCcCCHHHHCCCCC-CcHHHHHHHHHHHHHHHHC
Confidence            9999998865421  2221        2211 22455544333 5567888887777766643

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=98.83  E-value=2.8e-09  Score=110.62  Aligned_cols=115  Identities=17%  Similarity=0.362  Sum_probs=78.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.++... .+++        ++       ....++..++.+ +..||..|++|+|++|.|||++.+|.+.++
T Consensus       227 mEy~~gG~L~~~i~~-~~l~--------e~-------~~~~~~~qil~a-L~ylH~~~IiHRDiKp~NILl~~~g~vKl~  289 (423)
T 4fie_A          227 MEFLEGGALTDIVTH-TRMN--------EE-------QIAAVCLAVLQA-LSVLHAQGVIHRDIKSDSILLTHDGRVKLS  289 (423)
T ss_dssp             EECCTTEEHHHHHHH-SCCC--------HH-------HHHHHHHHHHHH-HHHHHHTTEECCCCSTTTEEECTTCCEEEC
T ss_pred             EeCCCCCcHHHHHhc-cCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCeecccCCHHHEEEcCCCCEEEe
Confidence            899999999998753 2222        11       123455655555 889999999999999999999999999999


Q ss_pred             ecccccccchhh--HHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHhc
Q 013370           81 DFGLLCRMERKH--QFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGE  140 (444)
Q Consensus        81 DFGmv~~L~~~~--R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~~  140 (444)
                      |||++..+....  +..++.      .-.| ...|.+..-+ ..+..|++.+.--+..++..
T Consensus       290 DFGla~~~~~~~~~~~~~~G------Tp~Y-mAPEvl~~~~-y~~~~DiWSlGvilyeml~G  343 (423)
T 4fie_A          290 DFGFCAQVSKEVPRRKSLVG------TPYW-MAPELISRLP-YGPEVDIWSLGIMVIEMVDG  343 (423)
T ss_dssp             CCTTCEECCSSCCCBCCCEE------CTTT-CCHHHHTTCC-BCTHHHHHHHHHHHHHHHHS
T ss_pred             cCccceECCCCCcccccccc------CcCc-CCHHHHCCCC-CCcHHHHHHHHHHHHHHHHC
Confidence            999999886542  122211      1112 2245554433 34567888887777666643

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=98.82  E-value=7e-09  Score=103.83  Aligned_cols=116  Identities=21%  Similarity=0.157  Sum_probs=72.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+........+        +.       ....++..++.+ +..||..|++|+|++|.||+++.+|++.++
T Consensus       103 ~E~~~gg~L~~~l~~~~~~~--------~~-------~~~~~~~qi~~a-L~~LH~~givHrDlkp~NILl~~~g~ikL~  166 (353)
T 3txo_A          103 MEFVNGGDLMFHIQKSRRFD--------EA-------RARFYAAEIISA-LMFLHDKGIIYRDLKLDNVLLDHEGHCKLA  166 (353)
T ss_dssp             EECCCSCBHHHHHHHHSSCC--------HH-------HHHHHHHHHHHH-HHHHHHTTCBCCCCCGGGEEECTTSCEEEC
T ss_pred             EeCCCCCcHHHHHHHcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCCcccCCCHHHEEECCCCCEEEc
Confidence            79999999988876433222        11       123455555554 888999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHH-HHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQ-SLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~-~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||++...........  .    ..+... ...+.+...+ ..+..|.+.+.--+..++.
T Consensus       167 DFG~a~~~~~~~~~~~--~----~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~  219 (353)
T 3txo_A          167 DFGMCKEGICNGVTTA--T----FCGTPDYIAPEILQEML-YGPAVDWWAMGVLLYEMLC  219 (353)
T ss_dssp             CCTTCBCSCC---------------CCGGGCCHHHHHHHH-CTTHHHHHHHHHHHHHHHH
T ss_pred             cccceeecccCCcccc--c----cCCCcCeEChhhcCCCC-cCCccCCCcchHHHHHHHh
Confidence            9999886443221110  0    011111 1133333322 2345677777666666654

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=98.81  E-value=1.1e-08  Score=96.96  Aligned_cols=115  Identities=14%  Similarity=0.135  Sum_probs=71.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..+.+........+        ..       ....++..++.+ +..|+..|++|+|+||.||+++.+|++.++
T Consensus        88 ~e~~~~~~l~~~l~~~~~~~--------~~-------~~~~~~~qi~~~-l~~LH~~~i~H~dlkp~Nili~~~~~~~l~  151 (279)
T 3fdn_A           88 LEYAPLGTVYRELQKLSKFD--------EQ-------RTATYITELANA-LSYCHSKRVIHRDIKPENLLLGSAGELKIA  151 (279)
T ss_dssp             ECCCTTEEHHHHHHHHSSCC--------HH-------HHHHHHHHHHHH-HHHHHTTTCEECCCCGGGEEECTTSCEEEC
T ss_pred             EecCCCCcHHHHHHhcCCCC--------HH-------HHHHHHHHHHHH-HHHHHhCCEecccCChHhEEEcCCCCEEEE
Confidence            79999999888765432221        11       123455555555 788999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||+....+.........      ...| ...+.+. -+...+..|+..+..-+..++.
T Consensus       152 Dfg~~~~~~~~~~~~~~~------~~~y-~aPE~~~-~~~~~~~~Di~slG~il~~l~~  202 (279)
T 3fdn_A          152 DFGWSVHAPSSRRTDLCG------TLDY-LPPEMIE-GRMHDEKVDLWSLGVLCYEFLV  202 (279)
T ss_dssp             SCCEESCC--------CC------CCTT-CCHHHHT-TCCCCTTHHHHHHHHHHHHHHH
T ss_pred             eccccccCCcccccccCC------CCCc-cCHhHhc-cCCCCccchhHhHHHHHHHHHH
Confidence            999887665543222110      1111 1123332 2334455677777666655554

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=98.80  E-value=7.1e-09  Score=102.23  Aligned_cols=79  Identities=24%  Similarity=0.350  Sum_probs=54.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.++.......+        +...    .....++..++++ +..+|..|++|+|++|.|||++.+|.+.+.
T Consensus        94 mE~~~gg~L~~~l~~~~~~~--------~~~~----~~~~~i~~qi~~a-l~ylH~~~IiHRDlKp~NILl~~~~~vKl~  160 (299)
T 4g31_A           94 MQLCRKENLKDWMNGRCTIE--------ERER----SVCLHIFLQIAEA-VEFLHSKGLMHRDLKPSNIFFTMDDVVKVG  160 (299)
T ss_dssp             EECCCSCCHHHHHHTCCSGG--------GSCH----HHHHHHHHHHHHH-HHHHHHTTCCCCCCCGGGEEECTTCCEEEC
T ss_pred             EecCCCCcHHHHHHhcCCCC--------hhHH----HHHHHHHHHHHHH-HHHHHHCcCccccCcHHHeEECCCCcEEEc
Confidence            89999999999886432111        1000    1123455555555 888999999999999999999999999999


Q ss_pred             ecccccccchhh
Q 013370           81 DFGLLCRMERKH   92 (444)
Q Consensus        81 DFGmv~~L~~~~   92 (444)
                      |||+...++...
T Consensus       161 DFGla~~~~~~~  172 (299)
T 4g31_A          161 DFGLVTAMDQDE  172 (299)
T ss_dssp             CCCCC-------
T ss_pred             cCccceecCCCc
Confidence            999999887654

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=98.79  E-value=2.7e-09  Score=116.79  Aligned_cols=116  Identities=16%  Similarity=0.188  Sum_probs=80.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+.+.....++        +.       ....++..++.+ +..||..|++|+|++|.|||++.+|.+.+.
T Consensus       271 mEy~~GGdL~~~l~~~~~l~--------E~-------~a~~y~~qIl~a-L~yLH~~gIiHRDLKPeNILld~~G~vKL~  334 (689)
T 3v5w_A          271 LDLMNGGDLHYHLSQHGVFS--------EA-------DMRFYAAEIILG-LEHMHNRFVVYRDLKPANILLDEHGHVRIS  334 (689)
T ss_dssp             ECCCCSCBHHHHHHHHCCCC--------HH-------HHHHHHHHHHHH-HHHHHTTTEECCCCSGGGEEECTTSCEEEC
T ss_pred             EecCCCCcHHHHHHhcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCccccCCchHHeEEeCCCCEEec
Confidence            89999999999886543232        11       122344444444 889999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHHH-HHHHHhcCCCCCCCChHHHHHHHHHHHhc
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQSL-VHSLTEMDVVRPGTNTLRVTMDLEDALGE  140 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~l-a~~l~~lG~l~~~~d~~~~~~~L~~~l~~  140 (444)
                      |||+...++......++        +...-+ .|.+..-...+..+|.+.+.--+..++..
T Consensus       335 DFGlA~~~~~~~~~t~~--------GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG  387 (689)
T 3v5w_A          335 DLGLACDFSKKKPHASV--------GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG  387 (689)
T ss_dssp             CCTTCEECSSCCCCSCC--------SCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHS
T ss_pred             ccceeeecCCCCCCCcc--------CCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhC
Confidence            99999988775544332        333333 45443221244567888887777777654

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=98.77  E-value=1.2e-08  Score=100.41  Aligned_cols=114  Identities=16%  Similarity=0.150  Sum_probs=74.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.++.......+        ...       ...++..++.+ +..||..|++|+|++|.||+++.+|++.++
T Consensus        85 ~e~~~gg~L~~~l~~~~~~~--------~~~-------~~~~~~qi~~a-L~~LH~~~ivHrDlkp~NIll~~~g~~kL~  148 (318)
T 1fot_A           85 MDYIEGGELFSLLRKSQRFP--------NPV-------AKFYAAEVCLA-LEYLHSKDIIYRDLKPENILLDKNGHIKIT  148 (318)
T ss_dssp             ECCCCSCBHHHHHHHTSSCC--------HHH-------HHHHHHHHHHH-HHHHHTTTEECCCCCGGGEEECTTSCEEEC
T ss_pred             EeCCCCCCHHHHHHHcCCCC--------HHH-------HHHHHHHHHHH-HHHHHHCCccccCCChheEEEcCCCCEEEe
Confidence            89999999999876432222        111       22345555544 888999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||+...++..... .+      -...|. ..+.+.. +-.....|.+.+.--+..++.
T Consensus       149 Dfg~a~~~~~~~~~-~~------gt~~y~-aPE~~~~-~~~~~~~DiwslG~il~ell~  198 (318)
T 1fot_A          149 DFGFAKYVPDVTYT-LC------GTPDYI-APEVVST-KPYNKSIDWWSFGILIYEMLA  198 (318)
T ss_dssp             CCSSCEECSSCBCC-CC------SCTTTC-CHHHHTT-CCBCTTHHHHHHHHHHHHHHH
T ss_pred             ecCcceecCCcccc-cc------CCcccc-CHhHhcC-CCCCcccchhhhHHHHHHHHh
Confidence            99999877653211 10      011121 1333332 223455677877766666654

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=98.76  E-value=7.7e-09  Score=103.63  Aligned_cols=114  Identities=17%  Similarity=0.095  Sum_probs=72.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+........+        ..+       ...++..++.+ +..||..|++|+|++|.||+++.+|.+.++
T Consensus       100 ~E~~~gg~L~~~l~~~~~~~--------~~~-------~~~~~~qi~~a-L~~LH~~givHrDlkp~NIll~~~g~vkL~  163 (353)
T 2i0e_A          100 MEYVNGGDLMYHIQQVGRFK--------EPH-------AVFYAAEIAIG-LFFLQSKGIIYRDLKLDNVMLDSEGHIKIA  163 (353)
T ss_dssp             EECCCSCBHHHHHHHHSSCC--------HHH-------HHHHHHHHHHH-HHHHHHTTCBCCCCCGGGEEECTTSCEEEC
T ss_pred             EeCCCCCcHHHHHHhcCCCC--------HHH-------HHHHHHHHHHH-HHHHHHCCEEeccCCHHHEEEcCCCcEEEE
Confidence            79999999998876432221        111       23455555554 788999999999999999999999999999


Q ss_pred             ecccccccchhhH--HhHHHHHHHHHhCCHHH-HHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQ--FAMLASIVHIVNGDWQS-LVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R--~~l~~ll~alv~~D~~~-la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||+.........  ..+        .+...- ..+.+..- -.....|.+.+.--+..++.
T Consensus       164 DFG~a~~~~~~~~~~~~~--------~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~  216 (353)
T 2i0e_A          164 DFGMCKENIWDGVTTKTF--------CGTPDYIAPEIIAYQ-PYGKSVDWWAFGVLLYEMLA  216 (353)
T ss_dssp             CCTTCBCCCCTTCCBCCC--------CSCGGGCCHHHHTTC-CBSTHHHHHHHHHHHHHHHH
T ss_pred             eCCcccccccCCcccccc--------cCCccccChhhhcCC-CcCCcccccchHHHHHHHHc
Confidence            9999876432111  111        011111 13333322 23455677777666666654

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.75  E-value=9.1e-09  Score=98.36  Aligned_cols=72  Identities=21%  Similarity=0.358  Sum_probs=58.8

Q ss_pred             HHHHHHHHHHHHHHH-HcCccccCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcC
Q 013370           41 DLVNKGVEATLVQLL-ETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMD  119 (444)
Q Consensus        41 ~La~~gv~a~L~QLl-~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG  119 (444)
                      .++..++.+ +..+| ..|++|+|+||+||++++  ++.++|||++..++...-..       +..+|.+.+.+.+.++|
T Consensus       174 ~i~~qi~~~-l~~lH~~~givHrDlkp~NILl~~--~~~liDFG~a~~~~~~~~~~-------~l~rd~~~~~~~f~~~g  243 (258)
T 1zth_A          174 GIFNDVVEN-VKRLYQEAELVHADLSEYNIMYID--KVYFIDMGQAVTLRHPMAES-------YLERDVRNIIRFFSKYG  243 (258)
T ss_dssp             HHHHHHHHH-HHHHHHTSCEECSSCSTTSEEESS--SEEECCCTTCEETTSTTHHH-------HHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHH-HHHHHHHCCEEeCCCCHHHEEEcC--cEEEEECcccccCCCccHHH-------HHHHHHHHHHHHHHHcC
Confidence            455555554 77899 999999999999999998  99999999999887654333       35688999999999999


Q ss_pred             CCC
Q 013370          120 VVR  122 (444)
Q Consensus       120 ~l~  122 (444)
                      +..
T Consensus       244 ~~~  246 (258)
T 1zth_A          244 VKA  246 (258)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            764

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.74  E-value=1.5e-08  Score=98.57  Aligned_cols=90  Identities=13%  Similarity=0.201  Sum_probs=66.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|++|.++ ...                 +    ...++..++.+ +..+|..|++|+|++|.||+++ +|++.++
T Consensus       179 mE~~~g~~L~~l-~~~-----------------~----~~~i~~qi~~~-l~~lH~~giiHrDlkp~NILl~-~~~vkl~  234 (282)
T 1zar_A          179 MELIDAKELYRV-RVE-----------------N----PDEVLDMILEE-VAKFYHRGIVHGDLSQYNVLVS-EEGIWII  234 (282)
T ss_dssp             EECCCCEEGGGC-CCS-----------------C----HHHHHHHHHHH-HHHHHHTTEECSCCSTTSEEEE-TTEEEEC
T ss_pred             EEecCCCcHHHc-chh-----------------h----HHHHHHHHHHH-HHHHHHCCCEeCCCCHHHEEEE-CCcEEEE
Confidence            899999998883 211                 0    11344444444 7889999999999999999999 9999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHHHHHHH-HhcCCC
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSL-TEMDVV  121 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l-~~lG~l  121 (444)
                      |||++...+...-..+       ..+|...+.+.| .+.|+-
T Consensus       235 DFG~a~~~~~~~a~e~-------l~rdv~~i~~~f~~~~~~~  269 (282)
T 1zar_A          235 DFPQSVEVGEEGWREI-------LERDVRNIITYFSRTYRTE  269 (282)
T ss_dssp             CCTTCEETTSTTHHHH-------HHHHHHHHHHHHHHHHCCC
T ss_pred             ECCCCeECCCCCHHHH-------HHHHHHHHHHHHHHhcCCC
Confidence            9999998876543332       347777777777 555543

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=98.73  E-value=1.7e-08  Score=100.86  Aligned_cols=114  Identities=14%  Similarity=0.099  Sum_probs=74.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+.......++        +.       ....++..++.+ +..||..|++|+|++|.||+++.+|.+.++
T Consensus       120 ~e~~~gg~L~~~l~~~~~~~--------~~-------~~~~~~~qi~~a-L~~LH~~~ivHrDlkp~NIll~~~g~~kL~  183 (350)
T 1rdq_E          120 MEYVAGGEMFSHLRRIGRFS--------EP-------HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQVT  183 (350)
T ss_dssp             EECCTTCBHHHHHHHHCCCC--------HH-------HHHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEECTTSCEEEC
T ss_pred             EcCCCCCcHHHHHHHcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCcccccCccceEEECCCCCEEEc
Confidence            79999999988876432222        11       123455555554 889999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||+...+...... ++.      ...| ...+.+..- ...+..|.+.+.--+..++.
T Consensus       184 DFg~a~~~~~~~~~-~~g------t~~y-~aPE~~~~~-~~~~~~DiwslG~il~ell~  233 (350)
T 1rdq_E          184 DFGFAKRVKGRTWT-LCG------TPEA-LAPEIILSK-GYNKAVDWWALGVLIYEMAA  233 (350)
T ss_dssp             CCTTCEECSSCBCC-CEE------CGGG-CCHHHHTTC-CBCTHHHHHHHHHHHHHHHH
T ss_pred             ccccceeccCCccc-ccC------Cccc-cCHHHhcCC-CCCCcCCEecccHhHhHHhh
Confidence            99999887653211 000      0111 113333322 23445677777666666554

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=98.72  E-value=2.2e-08  Score=98.18  Aligned_cols=73  Identities=21%  Similarity=0.227  Sum_probs=53.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+........+        ..       ....++..++.+ +..+|..|++|+|++|.||+++.+|++.++
T Consensus       100 ~e~~~~~~L~~~l~~~~~~~--------~~-------~~~~~~~qi~~a-l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~  163 (327)
T 3a62_A          100 LEYLSGGELFMQLEREGIFM--------ED-------TACFYLAEISMA-LGHLHQKGIIYRDLKPENIMLNHQGHVKLT  163 (327)
T ss_dssp             EECCTTEEHHHHHHHHSSCC--------HH-------HHHHHHHHHHHH-HHHHHHTTCCCCCCCTTTEEECTTSCEEEC
T ss_pred             EeCCCCCcHHHHHHhCCCCC--------HH-------HHHHHHHHHHHH-HHHHHhCCEEcccCCHHHeEECCCCcEEEE
Confidence            79999999988775432221        11       122344454444 788999999999999999999999999999


Q ss_pred             ecccccccc
Q 013370           81 DFGLLCRME   89 (444)
Q Consensus        81 DFGmv~~L~   89 (444)
                      |||+.....
T Consensus       164 Dfg~~~~~~  172 (327)
T 3a62_A          164 DFGLCKESI  172 (327)
T ss_dssp             CCSCC----
T ss_pred             eCCcccccc
Confidence            999987643

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=98.72  E-value=5.8e-08  Score=93.47  Aligned_cols=118  Identities=15%  Similarity=0.224  Sum_probs=72.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.+|.++.......+        ..       ....++..++.+ +..+|..|++|+|++|.||+++.+|++.++
T Consensus        90 ~e~~~g~~L~~~l~~~~~~~--------~~-------~~~~~~~qi~~~-l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~  153 (294)
T 4eqm_A           90 MEYIEGPTLSEYIESHGPLS--------VD-------TAINFTNQILDG-IKHAHDMRIVHRDIKPQNILIDSNKTLKIF  153 (294)
T ss_dssp             EECCCSCBHHHHHHHHCSCC--------HH-------HHHHHHHHHHHH-HHHHHHTTCCCCCCCGGGEEECTTSCEEEC
T ss_pred             EeCCCCCCHHHHHHhcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCcccCCCCHHHEEECCCCCEEEE
Confidence            79999999999876432222        11       123455555555 888999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||+...+++........ .  .-...|. ..+.+.. +...+..|++.+..-+..++.
T Consensus       154 Dfg~~~~~~~~~~~~~~~-~--~gt~~y~-aPE~~~~-~~~~~~~Di~slG~~l~~ll~  207 (294)
T 4eqm_A          154 DFGIAKALSETSLTQTNH-V--LGTVQYF-SPEQAKG-EATDECTDIYSIGIVLYEMLV  207 (294)
T ss_dssp             CCSSSTTC----------------CCSSC-CHHHHHT-CCCCTTHHHHHHHHHHHHHHH
T ss_pred             eCCCccccccccccccCc-c--ccCcccc-CHhHhcC-CCCCchHhHHHHHHHHHHHHh
Confidence            999998776542211100 0  0111111 1233322 223445677776666655554

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=98.69  E-value=2.7e-07  Score=87.38  Aligned_cols=74  Identities=22%  Similarity=0.245  Sum_probs=57.6

Q ss_pred             CCCcCCCCcccHHhhcC-CCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLST-GSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~-G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      |||++|..|.++..... ..        +..       ....++..++.+ +..+|..|++|+|++|.||+++.+|++.+
T Consensus        98 ~e~~~~~~L~~~l~~~~~~~--------~~~-------~~~~i~~qi~~~-l~~lH~~~i~H~dikp~Nili~~~~~~kl  161 (283)
T 3gen_A           98 TEYMANGCLLNYLREMRHRF--------QTQ-------QLLEMCKDVCEA-MEYLESKQFLHRDLAARNCLVNDQGVVKV  161 (283)
T ss_dssp             ECCCTTCBHHHHHHCGGGCC--------CHH-------HHHHHHHHHHHH-HHHHHHTTCCCSSCSGGGEEECTTSCEEE
T ss_pred             EeccCCCcHHHHHHHhccCC--------CHH-------HHHHHHHHHHHH-HHHHHHCCccCCCCccceEEEcCCCCEEE
Confidence            79999999999876421 11        111       223556666555 88999999999999999999999999999


Q ss_pred             Eecccccccch
Q 013370           80 LDFGLLCRMER   90 (444)
Q Consensus        80 LDFGmv~~L~~   90 (444)
                      +|||+...+..
T Consensus       162 ~Dfg~~~~~~~  172 (283)
T 3gen_A          162 SDFGLSRYVLD  172 (283)
T ss_dssp             CSTTGGGGBCC
T ss_pred             ccccccccccc
Confidence            99999876644

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=98.69  E-value=1.4e-07  Score=92.73  Aligned_cols=72  Identities=19%  Similarity=0.212  Sum_probs=53.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHc--------CccccCCCCCCeEEc
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLET--------GILHADPHPGNLRYT   72 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~--------GfFHADPHPGNILv~   72 (444)
                      |||++|++|.+++... +.+        .++.       .+++...+. .+..+|..        |++|+|++|.|||++
T Consensus        80 ~Ey~~~gsL~~~l~~~-~l~--------~~~~-------~~i~~~ia~-gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~  142 (303)
T 3hmm_A           80 SDYHEHGSLFDYLNRY-TVT--------VEGM-------IKLALSTAS-GLAHLHMEIVGTQGKPAIAHRDLKSKNILVK  142 (303)
T ss_dssp             EECCTTCBHHHHHHHC-CBC--------HHHH-------HHHHHHHHH-HHHHHHCCBCSTTCBCCEECSCCCGGGEEEC
T ss_pred             ecCCCCCcHHHHHHhC-CCC--------HHHH-------HHHHHHHHH-HHHHHHHhhhhccCCCCEeeccCCcccEEEC
Confidence            8999999999988632 221        1221       234443333 47778876        999999999999999


Q ss_pred             cCCcEEEEecccccccc
Q 013370           73 SSGQIGFLDFGLLCRME   89 (444)
Q Consensus        73 ~DGrLvlLDFGmv~~L~   89 (444)
                      .+|.+.+.|||+...++
T Consensus       143 ~~~~~Ki~DFGla~~~~  159 (303)
T 3hmm_A          143 KNGTCCIADLGLAVRHD  159 (303)
T ss_dssp             TTSCEEECCCTTCEEEE
T ss_pred             CCCCEEEEeCCCCcccc
Confidence            99999999999976554

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=98.68  E-value=1.4e-08  Score=97.68  Aligned_cols=79  Identities=23%  Similarity=0.305  Sum_probs=59.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.++.......+     ....       .....++..++.+ +..||..|++|+|+||+||+++.+|++.++
T Consensus       140 ~e~~~~~~L~~~~~~~~~~~-----~~~~-------~~~~~i~~qi~~a-L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~  206 (332)
T 3qd2_B          140 MQLCRKENLKDWMNRRCSLE-----DREH-------GVCLHIFIQIAEA-VEFLHSKGLMHRDLKPSNIFFTMDDVVKVG  206 (332)
T ss_dssp             EECCCSSCHHHHHHTCCSGG-----GSCH-------HHHHHHHHHHHHH-HHHHHHTTEECCCCCGGGEEECTTCCEEEC
T ss_pred             EEecCCCCHHHHHhcccCcc-----chhh-------HHHHHHHHHHHHH-HHHHHhCCeeecCCCcccEEEeCCCCEEEe
Confidence            79999999999886432111     0000       1123556666555 889999999999999999999999999999


Q ss_pred             ecccccccchhh
Q 013370           81 DFGLLCRMERKH   92 (444)
Q Consensus        81 DFGmv~~L~~~~   92 (444)
                      |||++..++...
T Consensus       207 DfG~a~~~~~~~  218 (332)
T 3qd2_B          207 DFGLVTAMDQDE  218 (332)
T ss_dssp             CCTTCEECSCC-
T ss_pred             ecCcccccccch
Confidence            999999887653

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=98.67  E-value=2.3e-08  Score=99.84  Aligned_cols=73  Identities=21%  Similarity=0.178  Sum_probs=56.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+........+        ..+       ...++..++.+ +..||..|++|+|++|.||+++.+|++.++
T Consensus        97 ~E~~~gg~L~~~l~~~~~~~--------~~~-------~~~~~~qi~~a-L~~LH~~~ivHrDlkp~NIll~~~g~vkL~  160 (345)
T 1xjd_A           97 MEYLNGGDLMYHIQSCHKFD--------LSR-------ATFYAAEIILG-LQFLHSKGIVYRDLKLDNILLDKDGHIKIA  160 (345)
T ss_dssp             EECCTTCBHHHHHHHHSSCC--------HHH-------HHHHHHHHHHH-HHHHHHTTCBCCCCCGGGEEECTTSCEEEC
T ss_pred             EeCCCCCcHHHHHHHcCCCC--------HHH-------HHHHHHHHHHH-HHHHHHCCeEeCCCChhhEEECCCCCEEEe
Confidence            79999999998876432222        111       22455555554 888999999999999999999999999999


Q ss_pred             ecccccccc
Q 013370           81 DFGLLCRME   89 (444)
Q Consensus        81 DFGmv~~L~   89 (444)
                      |||+.....
T Consensus       161 DFG~a~~~~  169 (345)
T 1xjd_A          161 DFGMCKENM  169 (345)
T ss_dssp             CCTTCBCCC
T ss_pred             EChhhhhcc
Confidence            999987653

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=98.67  E-value=4.1e-08  Score=100.54  Aligned_cols=116  Identities=18%  Similarity=0.092  Sum_probs=72.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHH-cCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLE-TGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~-~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      |||++|+.|.+.......++        ..       ....++..++.+ +..||. .|++|+|++|.||+++.+|++.+
T Consensus       227 ~e~~~~~~L~~~l~~~~~~~--------~~-------~~~~~~~qi~~a-L~~LH~~~giiHrDlkp~NIll~~~~~~kl  290 (446)
T 4ejn_A          227 MEYANGGELFFHLSRERVFS--------ED-------RARFYGAEIVSA-LDYLHSEKNVVYRDLKLENLMLDKDGHIKI  290 (446)
T ss_dssp             ECCCSSCBHHHHHHHHSCCC--------HH-------HHHHHHHHHHHH-HHHHHHHTCCCCCCCCGGGEEECSSSCEEE
T ss_pred             EeeCCCCcHHHHHHhcCCCC--------HH-------HHHHHHHHHHHH-HHHHhhcCCEEECCCCHHHEEECCCCCEEE
Confidence            89999999988776433222        11       123455555554 888997 99999999999999999999999


Q ss_pred             EecccccccchhhHHhHHHHHHHHHhCCHH-HHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           80 LDFGLLCRMERKHQFAMLASIVHIVNGDWQ-SLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        80 LDFGmv~~L~~~~R~~l~~ll~alv~~D~~-~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      +|||+...........  .    ...+... ...+.+.. +-..+..|+..+.--+..++.
T Consensus       291 ~DFG~a~~~~~~~~~~--~----~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~  344 (446)
T 4ejn_A          291 TDFGLCKEGIKDGATM--K----TFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMC  344 (446)
T ss_dssp             CCCCCCCTTCC-------C----CSSSCGGGCCHHHHHT-SCCCTHHHHHHHHHHHHHHHH
T ss_pred             ccCCCceeccCCCccc--c----cccCCccccCHhhcCC-CCCCCccchhhhHHHHHHHhh
Confidence            9999987644322110  0    0011111 11333332 233455677777666666554

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=98.66  E-value=1.5e-08  Score=100.74  Aligned_cols=72  Identities=25%  Similarity=0.176  Sum_probs=55.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+........+        ++       ....++..++.+ +..||..|++|+|++|.||+++.+|++.++
T Consensus        84 ~E~~~gg~L~~~l~~~~~~~--------~~-------~~~~~~~qi~~a-L~~LH~~~ivHrDlkp~NIll~~~g~vkL~  147 (337)
T 1o6l_A           84 MEYANGGELFFHLSRERVFT--------EE-------RARFYGAEIVSA-LEYLHSRDVVYRDIKLENLMLDKDGHIKIT  147 (337)
T ss_dssp             EECCTTCBHHHHHHHHSCCC--------HH-------HHHHHHHHHHHH-HHHHHHTTCBCCCCCGGGEEECTTSCEEEC
T ss_pred             EeCCCCCcHHHHHHhcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCeecCcCCHHHEEECCCCCEEEe
Confidence            89999999988776432222        11       122444555544 888999999999999999999999999999


Q ss_pred             eccccccc
Q 013370           81 DFGLLCRM   88 (444)
Q Consensus        81 DFGmv~~L   88 (444)
                      |||++...
T Consensus       148 DFG~a~~~  155 (337)
T 1o6l_A          148 DFGLCKEG  155 (337)
T ss_dssp             CCTTCBCS
T ss_pred             eccchhhc
Confidence            99998764

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=98.65  E-value=1.8e-08  Score=101.78  Aligned_cols=72  Identities=22%  Similarity=0.205  Sum_probs=55.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+........+        +.       ....++..++.+ +..||..|++|+|++|.||+++.+|++.++
T Consensus       118 ~E~~~gg~L~~~l~~~~~~~--------~~-------~~~~~~~qi~~a-L~~LH~~givHrDlkp~NIll~~~g~ikL~  181 (373)
T 2r5t_A          118 LDYINGGELFYHLQRERCFL--------EP-------RARFYAAEIASA-LGYLHSLNIVYRDLKPENILLDSQGHIVLT  181 (373)
T ss_dssp             EECCCSCBHHHHHHHHSSCC--------HH-------HHHHHHHHHHHH-HHHHHHTTCCCCCCCGGGEEECTTSCEEEC
T ss_pred             EeCCCCCcHHHHHHhcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCceecCCCHHHEEECCCCCEEEe
Confidence            89999999988776432221        11       122345555544 888999999999999999999999999999


Q ss_pred             eccccccc
Q 013370           81 DFGLLCRM   88 (444)
Q Consensus        81 DFGmv~~L   88 (444)
                      |||++...
T Consensus       182 DFG~a~~~  189 (373)
T 2r5t_A          182 DFGLCKEN  189 (373)
T ss_dssp             CCCBCGGG
T ss_pred             eCcccccc
Confidence            99998764

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=98.65  E-value=4.6e-08  Score=92.88  Aligned_cols=114  Identities=15%  Similarity=0.125  Sum_probs=73.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|++|.+........+        ..       ....++..++.+ +..++..|++|+|++|.||+++.+|++.++
T Consensus        93 ~e~~~~~~L~~~l~~~~~~~--------~~-------~~~~~~~qi~~~-l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~  156 (284)
T 2vgo_A           93 LEFAPRGELYKELQKHGRFD--------EQ-------RSATFMEELADA-LHYCHERKVIHRDIKPENLLMGYKGELKIA  156 (284)
T ss_dssp             ECCCTTEEHHHHHHHHSSCC--------HH-------HHHHHHHHHHHH-HHHHHTTTEECCCCSGGGEEECTTCCEEEC
T ss_pred             EEeCCCCcHHHHHHhcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCceecCCCHHHEEEcCCCCEEEe
Confidence            79999999988775432221        11       123555555555 788999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHH-HHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQ-SLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~-~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||+....+........        +... ...+.+. -+...+..|+..+..-+..++.
T Consensus       157 Dfg~~~~~~~~~~~~~~--------~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~  207 (284)
T 2vgo_A          157 DFGWSVHAPSLRRRTMC--------GTLDYLPPEMIE-GKTHDEKVDLWCAGVLCYEFLV  207 (284)
T ss_dssp             CCTTCEECSSSCBCCCC--------SCGGGCCHHHHT-TCCBCTTHHHHHHHHHHHHHHH
T ss_pred             cccccccCccccccccc--------CCCCcCCHHHhc-cCCCCcccchhhHHHHHHHHHH
Confidence            99998766543221111        1111 1123332 2334456677777665555553

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=98.64  E-value=3.3e-08  Score=98.84  Aligned_cols=148  Identities=11%  Similarity=0.036  Sum_probs=74.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCC--chhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSS--THLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~--~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLv   78 (444)
                      |||++|+.|.+++....... ....  +-.....+.+. ....++..++.+ +..||..|++|+|++|.|||++.++.+.
T Consensus       122 ~Ey~~~G~L~~~l~~~~~~~-~~~~~~~~~~~~~l~~~-~~~~i~~qia~g-l~yLH~~~iiHRDLKp~NILl~~~~~~K  198 (329)
T 4aoj_A          122 FEYMRHGDLNRFLRSHGPDA-KLLAGGEDVAPGPLGLG-QLLAVASQVAAG-MVYLAGLHFVHRDLATRNCLVGQGLVVK  198 (329)
T ss_dssp             EECCTTCBHHHHHHTSSCC------------CCSCCHH-HHHHHHHHHHHH-HHHHHHTTCCCSCCCGGGEEEETTTEEE
T ss_pred             EEcCCCCcHHHHHHhcCccc-ccccccccccCCCCCHH-HHHHHHHHHHHH-HHHHhcCCeecccccHhhEEECCCCcEE
Confidence            89999999999876421100 0000  00000011111 123455554444 7889999999999999999999999999


Q ss_pred             EEecccccccchhhHHhHHHHHHHHHhCCHHH-HHHHHHhcCCCCCCCChHHHHHHHHHHHhchhccCCCCcccHHHHHH
Q 013370           79 FLDFGLLCRMERKHQFAMLASIVHIVNGDWQS-LVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLG  157 (444)
Q Consensus        79 lLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~-la~~l~~lG~l~~~~d~~~~~~~L~~~l~~~~~~~~l~~~~f~~ll~  157 (444)
                      +.|||+...+...........    ..+-..- ..|.+.. +-.+...|++.|.--+.+++..  ...+..+.+..+++.
T Consensus       199 i~DFGla~~~~~~~~~~~~~~----~~gt~~ymAPE~~~~-~~~~~~sDvwS~Gvvl~Ellt~--G~~Pf~~~~~~~~~~  271 (329)
T 4aoj_A          199 IGDFGMSRDIYSTDYYRVGGR----TMLPIRWMPPESILY-RKFTTESDVWSFGVVLWEIFTY--GKQPWYQLSNTEAID  271 (329)
T ss_dssp             ECCCC--------------------CCCCGGGCCHHHHTT-CCCCHHHHHHHHHHHHHHHHTT--SCCTTCSSCHHHHHH
T ss_pred             EcccccceeccCCCcceecCc----ccccccccChhhhcC-CCCCccccccchHHHHHHHHcC--CCCCCCCCCHHHHHH
Confidence            999999987755432221110    0111111 1343332 2334456777777666666531  012344455444443


Q ss_pred             H
Q 013370          158 K  158 (444)
Q Consensus       158 ~  158 (444)
                      .
T Consensus       272 ~  272 (329)
T 4aoj_A          272 C  272 (329)
T ss_dssp             H
T ss_pred             H
Confidence            3

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=98.64  E-value=1.8e-08  Score=99.44  Aligned_cols=140  Identities=12%  Similarity=0.078  Sum_probs=83.0

Q ss_pred             CCCcCCCCcccHHhhcC--------CCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEc
Q 013370            1 MEWMVGESPTDLISLST--------GSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYT   72 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~--------G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~   72 (444)
                      |||++|++|.+++....        +.+.   ..++..+       ...++..++.+ +..||..|++|+|++|.|||++
T Consensus        94 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~---~~l~~~~-------~~~i~~qia~g-l~yLH~~~iiHRDlKp~NILl~  162 (299)
T 4asz_A           94 FEYMKHGDLNKFLRAHGPDAVLMAEGNPP---TELTQSQ-------MLHIAQQIAAG-MVYLASQHFVHRDLATRNCLVG  162 (299)
T ss_dssp             EECCTTCBHHHHHHHTSHHHHHC----CC---CCCCHHH-------HHHHHHHHHHH-HHHHHHTTCCCSCCSGGGEEEC
T ss_pred             EEcCCCCcHHHHHHhcCcccccccccCCC---CCCCHHH-------HHHHHHHHHHH-HHHHHhCCcccCccCHhhEEEC
Confidence            89999999999886421        1110   1122222       23455555544 7889999999999999999999


Q ss_pred             cCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHH-HHHHHHhcCCCCCCCChHHHHHHHHHHHhchhccCCCCccc
Q 013370           73 SSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQS-LVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVK  151 (444)
Q Consensus        73 ~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~-la~~l~~lG~l~~~~d~~~~~~~L~~~l~~~~~~~~l~~~~  151 (444)
                      .+|.+.+.|||+...+...........    ..+-..- ..|.+.. +-.++..|++.|.--+.+++..  ...+..+.+
T Consensus       163 ~~~~~Ki~DFGla~~~~~~~~~~~~~~----~~gt~~ymAPE~~~~-~~~~~k~DVwS~Gvvl~Ellt~--G~~Pf~~~~  235 (299)
T 4asz_A          163 ENLLVKIGDFGMSRDVYSTDYYRVGGH----TMLPIRWMPPESIMY-RKFTTESDVWSLGVVLWEIFTY--GKQPWYQLS  235 (299)
T ss_dssp             GGGCEEECCCSCHHHHTGGGCEEETTT----EEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTT--TCCTTTTSC
T ss_pred             CCCcEEECCcccceecCCCCceeecCc----eecChhhcCHHHHcC-CCCCchhhHHHHHHHHHHHHcC--CCCCCCCCC
Confidence            999999999999977655432111000    0011111 1333433 3344556888877777766631  022444455


Q ss_pred             HHHHHHH
Q 013370          152 FSRVLGK  158 (444)
Q Consensus       152 f~~ll~~  158 (444)
                      ..+++..
T Consensus       236 ~~~~~~~  242 (299)
T 4asz_A          236 NNEVIEC  242 (299)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            5444433

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=98.62  E-value=1.5e-08  Score=103.91  Aligned_cols=141  Identities=12%  Similarity=0.127  Sum_probs=82.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|. |.++.....+++        ..       ....++..++.+ +..+|..|++|+|++|.||+++.+|.+.++
T Consensus       138 mE~~~g~-L~~~i~~~~~l~--------~~-------~~~~~~~qil~a-l~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~  200 (398)
T 4b99_A          138 LDLMESD-LHQIIHSSQPLT--------LE-------HVRYFLYQLLRG-LKYMHSAQVIHRDLKPSNLLVNENCELKIG  200 (398)
T ss_dssp             EECCSEE-HHHHHTSSSCCC--------HH-------HHHHHHHHHHHH-HHHHHHTTCBCCCCCGGGEEECTTCCEEEC
T ss_pred             EeCCCCC-HHHHHHhcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCcCcCCCcCccccccCCCCCEEEe
Confidence            8999874 666554322222        11       123556666655 888999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHhchhccCCCCcccHHHHHHHHH
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIW  160 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~~~~~~~~l~~~~f~~ll~~l~  160 (444)
                      |||+...+.......-......+....| ...|.+..........|++.+.--+..++...   .+...-+..+.+..+.
T Consensus       201 DFGla~~~~~~~~~~~~~~~~~~GT~~Y-~APEv~~~~~~~~~~~DiWSlG~il~ell~G~---~pF~g~~~~~~l~~I~  276 (398)
T 4b99_A          201 DFGMARGLCTSPAEHQYFMTEYVATRWY-RAPELMLSLHEYTQAIDLWSVGCIFGEMLARR---QLFPGKNYVHQLQLIM  276 (398)
T ss_dssp             CCTTCBCC-------CCCCCSSCCCCTT-CCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTS---CSSCCSSHHHHHHHHH
T ss_pred             ecceeeecccCccccccccccceeChHh-cCHHHhcCCCCCCChhheehhHHHHHHHHHCC---CCCCCCCHHHHHHHHH
Confidence            9999987754321100000000011222 23566655555566678888776666666432   2233334444444444


Q ss_pred             HH
Q 013370          161 SI  162 (444)
Q Consensus       161 ~l  162 (444)
                      ..
T Consensus       277 ~~  278 (398)
T 4b99_A          277 MV  278 (398)
T ss_dssp             HH
T ss_pred             Hh
Confidence            43

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=98.62  E-value=4.5e-07  Score=87.67  Aligned_cols=73  Identities=21%  Similarity=0.280  Sum_probs=55.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHc--------CccccCCCCCCeEEc
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLET--------GILHADPHPGNLRYT   72 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~--------GfFHADPHPGNILv~   72 (444)
                      |||++|+.|.++.... +.        +..+       ...++..++.+ +..+|..        |++|+|++|.||+++
T Consensus       114 ~e~~~~g~L~~~l~~~-~~--------~~~~-------~~~i~~~i~~~-l~~lH~~~~~~~~~~~ivH~Dikp~Nill~  176 (337)
T 3mdy_A          114 TDYHENGSLYDYLKST-TL--------DAKS-------MLKLAYSSVSG-LCHLHTEIFSTQGKPAIAHRDLKSKNILVK  176 (337)
T ss_dssp             ECCCTTCBHHHHHHHC-CB--------CHHH-------HHHHHHHHHHH-HHHHHSCBCSTTCBCCEECSCCCGGGEEEC
T ss_pred             EeccCCCcHHHHhhcc-CC--------CHHH-------HHHHHHHHHHH-HHHHHHhhhhhccCCCEEecccchHHEEEC
Confidence            7999999999987532 11        1111       23455555554 7888888        999999999999999


Q ss_pred             cCCcEEEEecccccccch
Q 013370           73 SSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        73 ~DGrLvlLDFGmv~~L~~   90 (444)
                      .+|++.++|||+...+..
T Consensus       177 ~~~~~kl~Dfg~a~~~~~  194 (337)
T 3mdy_A          177 KNGTCCIADLGLAVKFIS  194 (337)
T ss_dssp             TTSCEEECCCTTCEECC-
T ss_pred             CCCCEEEEeCCCceeecc
Confidence            999999999999865543

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=98.61  E-value=3.4e-08  Score=93.02  Aligned_cols=75  Identities=21%  Similarity=0.230  Sum_probs=58.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.+|.+........+        +.       ....++..++.+ +..++..|++|+|++|.||+++.+|++.++
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~--------~~-------~~~~~~~qi~~~-l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~  153 (276)
T 2h6d_A           90 MEYVSGGELFDYICKHGRVE--------EM-------EARRLFQQILSA-VDYCHRHMVVHRDLKPENVLLDAHMNAKIA  153 (276)
T ss_dssp             EECCCSCBHHHHHHHHCSCC--------HH-------HHHHHHHHHHHH-HHHHHHHCSSCCCCCGGGEEECTTSCEEEC
T ss_pred             EeccCCCcHHHHHhccCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCCccCCCChhhEEECCCCCEEEe
Confidence            79999999998876432221        11       123555555555 888999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||....++..
T Consensus       154 dfg~~~~~~~~  164 (276)
T 2h6d_A          154 DFGLSNMMSDG  164 (276)
T ss_dssp             CCCGGGCCCC-
T ss_pred             ecccccccCCC
Confidence            99999887654

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=98.61  E-value=3.3e-08  Score=98.27  Aligned_cols=76  Identities=20%  Similarity=0.259  Sum_probs=55.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|++|.+.+....+       .++..+.       ..++..++.+ +..||..|++|+|++|.|||++.+|.+.+.
T Consensus       110 mEy~~gGsL~~~l~~~~~-------~l~~~~~-------~~i~~qia~g-L~yLH~~~IiHRDlKp~NILl~~~~~~Ki~  174 (307)
T 3omv_A          110 TQWCEGSSLYKHLHVQET-------KFQMFQL-------IDIARQTAQG-MDYLHAKNIIHRDMKSNNIFLHEGLTVKIG  174 (307)
T ss_dssp             EECCSSCBHHHHHHTSCC-------CCCHHHH-------HHHHHHHHHH-HHHHHHTTCBCSCCCSSSEEEETTEEEEEC
T ss_pred             EEcCCCCCHHHHHhhcCC-------CCCHHHH-------HHHHHHHHHH-HHHHHHCCccCCccCHHHEEECCCCcEEEe
Confidence            899999999998764321       1122222       2455554444 888999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...++..
T Consensus       175 DFGla~~~~~~  185 (307)
T 3omv_A          175 DFGLATVKSRW  185 (307)
T ss_dssp             CCSSCBC----
T ss_pred             eccCceecccC
Confidence            99998876543

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=98.60  E-value=3.6e-08  Score=97.17  Aligned_cols=75  Identities=19%  Similarity=0.159  Sum_probs=56.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcC--ccccCCCCCCeEEc-cCCcE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETG--ILHADPHPGNLRYT-SSGQI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~G--fFHADPHPGNILv~-~DGrL   77 (444)
                      |||++|+.|.+++.....++        ..       ....++..++.+ +..+|..|  ++|+|++|.|||++ ++|.+
T Consensus       108 mEy~~gg~L~~~l~~~~~l~--------~~-------~~~~~~~qi~~a-L~ylH~~~~~IiHRDlKp~NILl~~~~g~v  171 (290)
T 3fpq_A          108 TELMTSGTLKTYLKRFKVMK--------IK-------VLRSWCRQILKG-LQFLHTRTPPIIHRDLKCDNIFITGPTGSV  171 (290)
T ss_dssp             EECCCSCBHHHHHHHHSSCC--------HH-------HHHHHHHHHHHH-HHHHHTSSSCCCCCCCCGGGEEESSTTSCE
T ss_pred             EeCCCCCCHHHHHHhcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCCCEEecccChhheeEECCCCCE
Confidence            89999999999886433222        11       122455555544 78889999  99999999999998 58999


Q ss_pred             EEEecccccccchh
Q 013370           78 GFLDFGLLCRMERK   91 (444)
Q Consensus        78 vlLDFGmv~~L~~~   91 (444)
                      .+.|||+....+..
T Consensus       172 Kl~DFGla~~~~~~  185 (290)
T 3fpq_A          172 KIGDLGLATLKRAS  185 (290)
T ss_dssp             EECCTTGGGGCCTT
T ss_pred             EEEeCcCCEeCCCC
Confidence            99999998655443

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=98.60  E-value=4e-07  Score=89.12  Aligned_cols=75  Identities=23%  Similarity=0.233  Sum_probs=56.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.++.....+.       ++..+       ...++..++.+ +..|+..|++|+|++|.||+++.+|.+.++
T Consensus       129 ~e~~~~~~L~~~l~~~~~~-------~~~~~-------~~~i~~qi~~~-L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~  193 (325)
T 3kul_A          129 TEYMENGSLDTFLRTHDGQ-------FTIMQ-------LVGMLRGVGAG-MRYLSDLGYVHRDLAARNVLVDSNLVCKVS  193 (325)
T ss_dssp             EECCTTCBHHHHHHTTTTC-------SCHHH-------HHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEECTTCCEEEC
T ss_pred             eeCCCCCcHHHHHHhcccC-------CCHHH-------HHHHHHHHHHH-HHHHHHCCeeCCCCCcceEEECCCCCEEEC
Confidence            7999999999987543211       11221       23455555554 889999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+..
T Consensus       194 Dfg~a~~~~~  203 (325)
T 3kul_A          194 DFGLSRVLED  203 (325)
T ss_dssp             CCSSCEECC-
T ss_pred             CCCccccccc
Confidence            9999876643

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=98.59  E-value=4.8e-08  Score=95.79  Aligned_cols=73  Identities=21%  Similarity=0.209  Sum_probs=57.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.++......++        ..       ....++..++.+ +..||..|++|+|++|.||+++.+|++.++
T Consensus       120 ~e~~~~~~L~~~~~~~~~l~--------~~-------~~~~i~~qi~~a-L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~  183 (335)
T 2owb_A          120 LELCRRRSLLELHKRRKALT--------EP-------EARYYLRQIVLG-CQYLHRNRVIHRDLKLGNLFLNEDLEVKIG  183 (335)
T ss_dssp             ECCCTTCBHHHHHHHHCSCC--------HH-------HHHHHHHHHHHH-HHHHHHTTEECSCCCGGGEEECTTCCEEEC
T ss_pred             EecCCCCCHHHHHhccCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCCEecCCCchhEEEcCCCCEEEe
Confidence            79999999988765432222        11       123555655555 788999999999999999999999999999


Q ss_pred             ecccccccc
Q 013370           81 DFGLLCRME   89 (444)
Q Consensus        81 DFGmv~~L~   89 (444)
                      |||+...+.
T Consensus       184 Dfg~~~~~~  192 (335)
T 2owb_A          184 DFGLATKVE  192 (335)
T ss_dssp             CCTTCEECC
T ss_pred             eccCceecc
Confidence            999998765

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=98.58  E-value=8.5e-08  Score=92.37  Aligned_cols=77  Identities=18%  Similarity=0.202  Sum_probs=58.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.++.....+.       ++..+       ...++..++.+ +..+|..|++|+|++|.||+++.+|++.++
T Consensus        86 ~e~~~~~~L~~~l~~~~~~-------~~~~~-------~~~i~~qi~~a-l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~  150 (310)
T 3s95_A           86 TEYIKGGTLRGIIKSMDSQ-------YPWSQ-------RVSFAKDIASG-MAYLHSMNIIHRDLNSHNCLVRENKNVVVA  150 (310)
T ss_dssp             EECCTTCBHHHHHHHCCTT-------SCHHH-------HHHHHHHHHHH-HHHHHHTTEECSCCSTTSEEECTTSCEEEC
T ss_pred             EEecCCCcHHHHHHhccCC-------CCHHH-------HHHHHHHHHHH-HHHHHhCCccCCCCCcCeEEECCCCCEEEe
Confidence            7999999999988653210       11222       23455555555 889999999999999999999999999999


Q ss_pred             ecccccccchhh
Q 013370           81 DFGLLCRMERKH   92 (444)
Q Consensus        81 DFGmv~~L~~~~   92 (444)
                      |||+...+....
T Consensus       151 Dfg~~~~~~~~~  162 (310)
T 3s95_A          151 DFGLARLMVDEK  162 (310)
T ss_dssp             CCTTCEECC---
T ss_pred             ecccceeccccc
Confidence            999998876543

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=98.58  E-value=4.9e-07  Score=87.76  Aligned_cols=72  Identities=19%  Similarity=0.241  Sum_probs=55.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHH--------HcCccccCCCCCCeEEc
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLL--------ETGILHADPHPGNLRYT   72 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl--------~~GfFHADPHPGNILv~   72 (444)
                      |||++|++|.++.... +.        +.++       ...++..++.+ +..+|        ..|++|+|++|.||+++
T Consensus       119 ~e~~~~g~L~~~l~~~-~~--------~~~~-------~~~i~~~i~~~-l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~  181 (342)
T 1b6c_B          119 SDYHEHGSLFDYLNRY-TV--------TVEG-------MIKLALSTASG-LAHLHMEIVGTQGKPAIAHRDLKSKNILVK  181 (342)
T ss_dssp             ECCCTTCBHHHHHHHC-CB--------CHHH-------HHHHHHHHHHH-HHHHHCCBCSTTCBCEEECSCCSGGGEEEC
T ss_pred             EeecCCCcHHHHHhcc-Cc--------cHHH-------HHHHHHHHHHH-HHHHHHHHhhhcccCCeeeCCCCHHHEEEC
Confidence            7999999999987532 11        1121       23455555554 78889        89999999999999999


Q ss_pred             cCCcEEEEecccccccc
Q 013370           73 SSGQIGFLDFGLLCRME   89 (444)
Q Consensus        73 ~DGrLvlLDFGmv~~L~   89 (444)
                      .+|++.++|||+...++
T Consensus       182 ~~~~~kL~Dfg~~~~~~  198 (342)
T 1b6c_B          182 KNGTCCIADLGLAVRHD  198 (342)
T ss_dssp             TTSCEEECCCTTCEEEE
T ss_pred             CCCCEEEEECCCceecc
Confidence            99999999999985543

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=98.58  E-value=9.6e-08  Score=94.86  Aligned_cols=75  Identities=23%  Similarity=0.280  Sum_probs=58.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+........+        ..       ....++..++.+ +..|+..|++|+|++|.||+++.+|++.++
T Consensus       138 ~e~~~~~~L~~~l~~~~~~~--------~~-------~~~~~~~qi~~a-L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~  201 (355)
T 1vzo_A          138 LDYINGGELFTHLSQRERFT--------EH-------EVQIYVGEIVLA-LEHLHKLGIIYRDIKLENILLDSNGHVVLT  201 (355)
T ss_dssp             ECCCCSCBHHHHHHHHSCCC--------HH-------HHHHHHHHHHHH-HHHHHHTTCCCCCCCGGGEEECTTSCEEES
T ss_pred             eecCCCCCHHHHHHHcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCcccCCCCHHHEEECCCCcEEEe
Confidence            79999999998876432222        11       123455555554 888999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...+...
T Consensus       202 DfG~a~~~~~~  212 (355)
T 1vzo_A          202 DFGLSKEFVAD  212 (355)
T ss_dssp             CSSEEEECCGG
T ss_pred             eCCCCeecccC
Confidence            99999877543

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=98.57  E-value=6.1e-08  Score=91.57  Aligned_cols=76  Identities=20%  Similarity=0.270  Sum_probs=57.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.+......+       .++.++       ...++..++.+ +..++..|++|+|++|.||+++.+|++.++
T Consensus        90 ~e~~~~~~L~~~l~~~~~-------~~~~~~-------~~~~~~qi~~~-l~~lH~~~i~H~dl~p~Nili~~~~~~kl~  154 (278)
T 3cok_A           90 LEMCHNGEMNRYLKNRVK-------PFSENE-------ARHFMHQIITG-MLYLHSHGILHRDLTLSNLLLTRNMNIKIA  154 (278)
T ss_dssp             EECCTTEEHHHHHHTCSS-------CCCHHH-------HHHHHHHHHHH-HHHHHHTTEECSSCCGGGEEECTTCCEEEC
T ss_pred             EecCCCCcHHHHHhhccC-------CCCHHH-------HHHHHHHHHHH-HHHHHHCCeecCCCCHHHEEEcCCCCEEEE
Confidence            799999999888763211       111221       23556665555 788999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...+...
T Consensus       155 dfg~~~~~~~~  165 (278)
T 3cok_A          155 DFGLATQLKMP  165 (278)
T ss_dssp             CCTTCEECC--
T ss_pred             eecceeeccCC
Confidence            99999887643

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=98.57  E-value=6.1e-08  Score=92.51  Aligned_cols=74  Identities=20%  Similarity=0.198  Sum_probs=57.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..+.++.......+        ..       ....++..++.+ +..+|..|++|+|++|.||+++.+|++.++
T Consensus        94 ~e~~~~~~L~~~~~~~~~~~--------~~-------~~~~i~~qi~~~-l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~  157 (294)
T 2rku_A           94 LELCRRRSLLELHKRRKALT--------EP-------EARYYLRQIVLG-CQYLHRNRVIHRDLKLGNLFLNEDLEVKIG  157 (294)
T ss_dssp             EECCTTCBHHHHHHHHCSCC--------HH-------HHHHHHHHHHHH-HHHHHHTTEECCCCCGGGEEECTTCCEEEC
T ss_pred             EecCCCCCHHHHHHhcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCccccCCChHhEEEcCCCCEEEE
Confidence            79999999988765432222        11       123455555555 788999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+..
T Consensus       158 dfg~~~~~~~  167 (294)
T 2rku_A          158 DFGLATKVEY  167 (294)
T ss_dssp             CCTTCEECCS
T ss_pred             eccCceeccc
Confidence            9999987653

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=98.56  E-value=6e-07  Score=84.48  Aligned_cols=75  Identities=21%  Similarity=0.241  Sum_probs=57.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.++.....+.       ++.++       ...++..++.+ +..+|..|++|+|++|.||+++.+|++.++
T Consensus        84 ~e~~~~~~L~~~l~~~~~~-------~~~~~-------~~~i~~~i~~~-l~~lH~~~i~H~dikp~Nil~~~~~~~kl~  148 (269)
T 4hcu_A           84 FEFMEHGCLSDYLRTQRGL-------FAAET-------LLGMCLDVCEG-MAYLEEACVIHRDLAARNCLVGENQVIKVS  148 (269)
T ss_dssp             EECCTTCBHHHHHHTTTTC-------CCHHH-------HHHHHHHHHHH-HHHHHHTTCCCSCCCGGGEEECGGGCEEEC
T ss_pred             EEeCCCCcHHHHHHhcCcc-------cCHHH-------HHHHHHHHHHH-HHHHHhCCeecCCcchheEEEcCCCCEEec
Confidence            7999999999987543211       11221       23455555554 889999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+..
T Consensus       149 Dfg~~~~~~~  158 (269)
T 4hcu_A          149 DFGMTRFVLD  158 (269)
T ss_dssp             CTTGGGGBCC
T ss_pred             cccccccccc
Confidence            9999876644

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=98.56  E-value=5.8e-08  Score=94.98  Aligned_cols=74  Identities=24%  Similarity=0.456  Sum_probs=57.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.++.... +.        +..+       ...++..++.+ +..++..|++|+|+||+||+++.+|++.++
T Consensus       121 ~e~~~~~~L~~~l~~~-~l--------~~~~-------~~~i~~qi~~~-L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~  183 (321)
T 2c30_A          121 MEFLQGGALTDIVSQV-RL--------NEEQ-------IATVCEAVLQA-LAYLHAQGVIHRDIKSDSILLTLDGRVKLS  183 (321)
T ss_dssp             ECCCCSCBHHHHHTTC-CC--------CHHH-------HHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEECTTCCEEEC
T ss_pred             EecCCCCCHHHHHHhc-CC--------CHHH-------HHHHHHHHHHH-HHHHHHCCeecCCCCHHHEEECCCCcEEEe
Confidence            7999999999986421 11        1121       23455555554 888999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||++..++..
T Consensus       184 Dfg~~~~~~~~  194 (321)
T 2c30_A          184 DFGFCAQISKD  194 (321)
T ss_dssp             CCTTCEECCSS
T ss_pred             eeeeeeecccC
Confidence            99999887653

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=98.56  E-value=7.4e-08  Score=99.65  Aligned_cols=119  Identities=17%  Similarity=0.162  Sum_probs=74.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.++.....+.       +++..       ...++..++.+ +..++..|++|+|++|.||+++.+|.+.++
T Consensus       153 ~Ey~~gg~L~~~l~~~~~~-------l~e~~-------~~~~~~qi~~a-L~~LH~~giiHrDLKp~NILl~~~g~vkL~  217 (437)
T 4aw2_A          153 MDYYVGGDLLTLLSKFEDR-------LPEEM-------ARFYLAEMVIA-IDSVHQLHYVHRDIKPDNILMDMNGHIRLA  217 (437)
T ss_dssp             ECCCTTCBHHHHHHTTTTC-------CCHHH-------HHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEECTTSCEEEC
T ss_pred             EecCCCCcHHHHHHHccCC-------CCHHH-------HHHHHHHHHHH-HHHHHhCCeEecccCHHHeeEcCCCCEEEc
Confidence            8999999999987642110       11111       22345555544 888999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHH-HHHHHHHh----cCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQ-SLVHSLTE----MDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~-~la~~l~~----lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||+...+.........     ...+... ...|.+..    -+...+..|++.+.--+..++.
T Consensus       218 DFGla~~~~~~~~~~~~-----~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~ellt  276 (437)
T 4aw2_A          218 DFGSCLKLMEDGTVQSS-----VAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLY  276 (437)
T ss_dssp             CCTTCEECCTTSCEECC-----SCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHH
T ss_pred             chhhhhhcccCCCcccc-----cccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHh
Confidence            99998776543211100     0001111 11333332    2334455677777766666654

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=98.56  E-value=4.4e-08  Score=106.58  Aligned_cols=115  Identities=17%  Similarity=0.117  Sum_probs=73.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+.+.....++        +.+       ...++..++.+ +..||..|++|+|++|.||+++.+|.+.++
T Consensus       421 ~E~~~gg~L~~~l~~~~~~~--------~~~-------~~~~~~qi~~a-L~~LH~~gIiHrDLKp~NILl~~~g~ikL~  484 (674)
T 3pfq_A          421 MEYVNGGDLMYHIQQVGRFK--------EPH-------AVFYAAEIAIG-LFFLQSKGIIYRDLKLDNVMLDSEGHIKIA  484 (674)
T ss_dssp             EECCCSCBHHHHHHHHSSCC--------HHH-------HHHHHHHHHHH-HHHHHHTSEECCCCCSTTEEECSSSCEEEC
T ss_pred             EeCcCCCcHHHHHHhcCCCC--------HHH-------HHHHHHHHHHH-HHHHHhCCeEeccCChhhEEEcCCCcEEEe
Confidence            89999999988876533222        111       22445555554 889999999999999999999999999999


Q ss_pred             ecccccccchhhH--HhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQ--FAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R--~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||+.........  ..++.      ...|. ..|.+.. +-.....|.+.+.--+..++.
T Consensus       485 DFGla~~~~~~~~~~~~~~G------T~~Y~-APE~l~~-~~~~~~~DvwSlGvilyellt  537 (674)
T 3pfq_A          485 DFGMCKENIWDGVTTKTFCG------TPDYI-APEIIAY-QPYGKSVDWWAFGVLLYEMLA  537 (674)
T ss_dssp             CCTTCEECCCTTCCBCCCCS------CSSSC-CHHHHTC-CCBSTHHHHHHHHHHHHHHHH
T ss_pred             ecceeeccccCCcccccccC------CCccc-CHhhhcC-CCCCccceEechHHHHHHHHc
Confidence            9999876432211  11110      11121 1344432 223455677877766666664

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=98.55  E-value=6.1e-08  Score=98.60  Aligned_cols=75  Identities=19%  Similarity=0.299  Sum_probs=57.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+........+        ...       ...++..++.+ +..||..|++|+|++|.||+++.+|.+.++
T Consensus        94 ~e~~~gg~L~~~l~~~~~l~--------~~~-------~~~~~~qi~~a-L~~LH~~givHrDlkp~NIll~~~g~vkL~  157 (384)
T 4fr4_A           94 VDLLLGGDLRYHLQQNVHFK--------EET-------VKLFICELVMA-LDYLQNQRIIHRDMKPDNILLDEHGHVHIT  157 (384)
T ss_dssp             ECCCTTEEHHHHHHTTCCCC--------HHH-------HHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEECTTSCEEEC
T ss_pred             EecCCCCcHHHHHHhcCCCC--------HHH-------HHHHHHHHHHH-HHHHHHCCceeccCcHHHeEECCCCCEEEe
Confidence            79999999988876432221        111       22445555544 888999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...++..
T Consensus       158 DFG~a~~~~~~  168 (384)
T 4fr4_A          158 DFNIAAMLPRE  168 (384)
T ss_dssp             CCTTCEECCTT
T ss_pred             ccceeeeccCC
Confidence            99999887654

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=98.54  E-value=3.3e-07  Score=88.98  Aligned_cols=73  Identities=21%  Similarity=0.211  Sum_probs=56.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.+|.++.... +.+        ..       ....++..++.+ +..|+..|++|+|++|.||+++.+|++.++
T Consensus       114 ~e~~~~~~L~~~l~~~-~~~--------~~-------~~~~i~~~l~~~-l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~  176 (318)
T 3lxp_A          114 MEYVPLGSLRDYLPRH-SIG--------LA-------QLLLFAQQICEG-MAYLHAQHYIHRDLAARNVLLDNDRLVKIG  176 (318)
T ss_dssp             ECCCTTCBHHHHGGGS-CCC--------HH-------HHHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEECTTCCEEEC
T ss_pred             EecccCCcHHHHHhhC-CCC--------HH-------HHHHHHHHHHHH-HHHHHhCCccCCCCchheEEEcCCCCEEEC
Confidence            7999999999887532 221        11       123555555555 889999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...++.
T Consensus       177 Dfg~a~~~~~  186 (318)
T 3lxp_A          177 DFGLAKAVPE  186 (318)
T ss_dssp             CGGGCEECCT
T ss_pred             Cccccccccc
Confidence            9999876543

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=98.54  E-value=3.4e-08  Score=103.32  Aligned_cols=116  Identities=16%  Similarity=0.140  Sum_probs=75.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+.......+        ++..       ...++..++.+ +..+|..|++|+|++|.||+++.+|.+.++
T Consensus        95 ~E~~~gg~L~~~l~~~~~l--------~~~~-------~~~i~~qi~~a-L~~LH~~givHrDLkp~NIll~~~~~vkL~  158 (476)
T 2y94_A           95 MEYVSGGELFDYICKNGRL--------DEKE-------SRRLFQQILSG-VDYCHRHMVVHRDLKPENVLLDAHMNAKIA  158 (476)
T ss_dssp             EECCSSEEHHHHTTSSSSC--------CHHH-------HHHHHHHHHHH-HHHHHTTTEECSCCSGGGEEECTTCCEEEC
T ss_pred             EeCCCCCcHHHHHHhcCCC--------CHHH-------HHHHHHHHHHH-HHHHHHCCCCcccccHHHEEEecCCCeEEE
Confidence            7999999999886532111        1111       23455555555 788999999999999999999999999999


Q ss_pred             ecccccccchhhHH-hHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQF-AMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~-~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||+...+++.... ..+      ....| ...+.+..-....+..|++.+.--+..++.
T Consensus       159 DFG~a~~~~~~~~~~~~~------gt~~y-~aPE~~~~~~~~~~~~DiwSlGvil~ellt  211 (476)
T 2y94_A          159 DFGLSNMMSDGEFLRTSC------GSPNY-AAPEVISGRLYAGPEVDIWSSGVILYALLC  211 (476)
T ss_dssp             CCSSCEECCTTCCBCCCC------SCSTT-CCHHHHTTCCBCSHHHHHHHHHHHHHHHHH
T ss_pred             eccchhhccccccccccC------CCcCe-EChhhccCCCCCCCcceehhhHHHHHHHhh
Confidence            99999887653211 000      01112 123444433333445677777666666654

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=98.54  E-value=6.6e-07  Score=85.27  Aligned_cols=74  Identities=22%  Similarity=0.207  Sum_probs=56.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|++|.++.....+.       ++..+       ...++..++.+ +..+|..|++|+|++|.||+++.+|++.++
T Consensus       104 ~e~~~~~~L~~~l~~~~~~-------~~~~~-------~~~~~~~i~~~-l~~lH~~~i~H~dikp~Nil~~~~~~~kl~  168 (302)
T 4e5w_A          104 MEFLPSGSLKEYLPKNKNK-------INLKQ-------QLKYAVQICKG-MDYLGSRQYVHRDLAARNVLVESEHQVKIG  168 (302)
T ss_dssp             EECCTTCBHHHHHHHHTTT-------CCHHH-------HHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEEEETTEEEEC
T ss_pred             EEeCCCCcHHHHHHhcccc-------CCHHH-------HHHHHHHHHHH-HHHhhcCCcccCCCchheEEEcCCCCEEEC
Confidence            7999999999987543210       11121       23455555555 889999999999999999999999999999


Q ss_pred             ecccccccc
Q 013370           81 DFGLLCRME   89 (444)
Q Consensus        81 DFGmv~~L~   89 (444)
                      |||+...+.
T Consensus       169 Dfg~~~~~~  177 (302)
T 4e5w_A          169 DFGLTKAIE  177 (302)
T ss_dssp             CCTTCEECC
T ss_pred             ccccccccc
Confidence            999987554

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=98.53  E-value=9.3e-08  Score=95.10  Aligned_cols=72  Identities=21%  Similarity=0.187  Sum_probs=55.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+.......++        ++       ....++..++.+ +..||..|++|+|++|.||+++.+|++.++
T Consensus        89 ~e~~~gg~L~~~l~~~~~l~--------~~-------~~~~~~~qi~~a-L~~LH~~~ivHrDlkp~NIll~~~g~~kL~  152 (345)
T 3a8x_A           89 IEYVNGGDLMFHMQRQRKLP--------EE-------HARFYSAEISLA-LNYLHERGIIYRDLKLDNVLLDSEGHIKLT  152 (345)
T ss_dssp             ECCCCSCBHHHHHHHHSSCC--------HH-------HHHHHHHHHHHH-HHHHHHTTCBCCCCCGGGEEECTTSCEEEC
T ss_pred             EeCCCCCcHHHHHHHcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCceecCCCHHHEEECCCCCEEEE
Confidence            89999999988776432222        11       123455555554 888999999999999999999999999999


Q ss_pred             eccccccc
Q 013370           81 DFGLLCRM   88 (444)
Q Consensus        81 DFGmv~~L   88 (444)
                      |||+....
T Consensus       153 DFG~a~~~  160 (345)
T 3a8x_A          153 DYGMCKEG  160 (345)
T ss_dssp             CGGGCBCS
T ss_pred             eccccccc
Confidence            99998764

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=98.53  E-value=7e-08  Score=97.52  Aligned_cols=71  Identities=25%  Similarity=0.397  Sum_probs=55.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccC-CcEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS-GQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~D-GrLvl   79 (444)
                      |||++|+.|.++..   .++        ..       ....++..++.+ +..+|..|++|+|++|.|||++.+ |++.+
T Consensus        99 mE~~~g~~L~~~~~---~l~--------~~-------~~~~~~~qll~a-l~ylH~~gIiHRDiKPeNiLl~~~~~~~kl  159 (361)
T 4f9c_A           99 MPYLEHESFLDILN---SLS--------FQ-------EVREYMLNLFKA-LKRIHQFGIVHRDVKPSNFLYNRRLKKYAL  159 (361)
T ss_dssp             EECCCCCCHHHHHT---TCC--------HH-------HHHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEEETTTTEEEE
T ss_pred             EeCCCcccHHHHHc---CCC--------HH-------HHHHHHHHHHHH-HHHHHHCCeEeCcCCHHHeEEeCCCCeEEE
Confidence            89999999988763   222        11       123556666655 888999999999999999999877 89999


Q ss_pred             Eecccccccch
Q 013370           80 LDFGLLCRMER   90 (444)
Q Consensus        80 LDFGmv~~L~~   90 (444)
                      +|||+.....+
T Consensus       160 ~DFGla~~~~~  170 (361)
T 4f9c_A          160 VDFGLAQGTHD  170 (361)
T ss_dssp             CCCTTCEECTT
T ss_pred             CcCCCCcccCC
Confidence            99999976654

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=98.52  E-value=8.5e-08  Score=102.25  Aligned_cols=119  Identities=14%  Similarity=0.143  Sum_probs=74.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+......... .   .+++..       ...++..++.+ +..||..|++|+|+||.||+++.+|++.++
T Consensus       264 mE~~~gg~L~~~l~~~~~~~-~---~l~e~~-------~~~~~~qi~~a-L~~LH~~gIvHrDLKP~NILl~~~g~vkL~  331 (543)
T 3c4z_A          264 MTIMNGGDIRYHIYNVDEDN-P---GFQEPR-------AIFYTAQIVSG-LEHLHQRNIIYRDLKPENVLLDDDGNVRIS  331 (543)
T ss_dssp             ECCCTTCBHHHHHHTSSTTS-C---SCCHHH-------HHHHHHHHHHH-HHHHHHTTEECCCCCGGGEEECTTSCEEEC
T ss_pred             EEeccCCCHHHHHHHhhccc-c---cccHHH-------HHHHHHHHHHH-HHHHHHcCCcccCCChHHEEEeCCCCEEEe
Confidence            89999999988765321000 0   111211       22344455544 888999999999999999999999999999


Q ss_pred             ecccccccchhhHHh--HHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQFA--MLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~~--l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||++..+.......  ++.      ...| ...+.+..- -.....|.+.+.--+..++.
T Consensus       332 DFGla~~~~~~~~~~~~~~G------T~~Y-~APE~l~~~-~~~~~~DiwSlGvilyellt  384 (543)
T 3c4z_A          332 DLGLAVELKAGQTKTKGYAG------TPGF-MAPELLLGE-EYDFSVDYFALGVTLYEMIA  384 (543)
T ss_dssp             CCTTCEECCTTCCCBCCCCS------CTTT-SCHHHHTTC-CBCTHHHHHHHHHHHHHHHH
T ss_pred             ecceeeeccCCCcccccccC------Cccc-cChhhhcCC-CCChHHhcCcchHHHHHHHh
Confidence            999998876543211  110      1112 123444332 23445677777766666654

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.52  E-value=5.2e-08  Score=100.45  Aligned_cols=94  Identities=15%  Similarity=0.197  Sum_probs=67.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCC-----
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG-----   75 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DG-----   75 (444)
                      ||||+|.++.++....                 ++    ..+...++.+ +..+|..|++|+|++|+|||++++|     
T Consensus       190 ME~i~G~~L~~l~~~~-----------------~~----~~l~~qll~~-l~~lH~~gIVHrDLKp~NILl~~dgd~~d~  247 (397)
T 4gyi_A          190 MSLVDALPMRQVSSVP-----------------DP----ASLYADLIAL-ILRLAKHGLIHGDFNEFNILIREEKDAEDP  247 (397)
T ss_dssp             EECCSCEEGGGCCCCS-----------------CH----HHHHHHHHHH-HHHHHHTTEECSCCSTTSEEEEEEECSSCT
T ss_pred             EEecCCccHhhhcccH-----------------HH----HHHHHHHHHH-HHHHHHCCCcCCCCCHHHEEEeCCCCcccc
Confidence            8999999887653211                 11    1344444444 6788999999999999999999887     


Q ss_pred             -----cEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHh-cCCCCC
Q 013370           76 -----QIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTE-MDVVRP  123 (444)
Q Consensus        76 -----rLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~-lG~l~~  123 (444)
                           ++++|||+.+...+-..-..       +..+|...+.+-|.+ .++.+.
T Consensus       248 ~~~~~~~~iID~~Q~V~~~hp~a~~-------~l~RDv~ni~~fF~kk~~~~~~  294 (397)
T 4gyi_A          248 SSITLTPIIIXFPQMVSMDHPNAEM-------YFDRDVQCIKRFFERRFHFVST  294 (397)
T ss_dssp             TSEEEEEEECCCTTCEETTSTTHHH-------HHHHHHHHHHHHHHHHHCCCCS
T ss_pred             cccccceEEEEeCCcccCCCCChHH-------HHHHHHHHHHHHHHhccCCccc
Confidence                 49999999988766443222       345888888888854 455543

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=98.52  E-value=3.7e-08  Score=97.60  Aligned_cols=148  Identities=11%  Similarity=0.083  Sum_probs=83.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCC--chhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSS--THLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~--~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLv   78 (444)
                      |||++|++|.+++............  .......+++. ....++..++. .+..|+..|++|+|++|.|||++.+|.+.
T Consensus       108 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~i~~qia~-gl~yLH~~~iiHRDLK~~NILl~~~~~~K  185 (308)
T 4gt4_A          108 FSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPP-DFVHLVAQIAA-GMEYLSSHHVVHKDLATRNVLVYDKLNVK  185 (308)
T ss_dssp             EECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHH-HHHHHHHHHHH-HHHHHHHTTCCCSCCSGGGEEECGGGCEE
T ss_pred             EEcCCCCcHHHHHHhhCccccccccccccccccCCCHH-HHHHHHHHHHH-HHHHHHhCCCCCCCccccceEECCCCCEE
Confidence            8999999999988643210000000  00000011111 12345544444 48889999999999999999999999999


Q ss_pred             EEecccccccchhhHHhHHHHHHHHHhCCHH-HHHHHHHhcCCCCCCCChHHHHHHHHHHHhchhccCCCCcccHHHHHH
Q 013370           79 FLDFGLLCRMERKHQFAMLASIVHIVNGDWQ-SLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLG  157 (444)
Q Consensus        79 lLDFGmv~~L~~~~R~~l~~ll~alv~~D~~-~la~~l~~lG~l~~~~d~~~~~~~L~~~l~~~~~~~~l~~~~f~~ll~  157 (444)
                      +.|||+...+...........    ..+-.. ...|.+.. +..+...|++.|.--+.+++..  ...+....+..+++.
T Consensus       186 i~DFGlar~~~~~~~~~~~~~----~~gt~~ymAPE~l~~-~~~s~ksDVwSfGvvl~El~t~--g~~Pf~~~~~~~~~~  258 (308)
T 4gt4_A          186 ISDLGLFREVYAADYYKLLGN----SLLPIRWMAPEAIMY-GKFSIDSDIWSYGVVLWEVFSY--GLQPYCGYSNQDVVE  258 (308)
T ss_dssp             ECCSCCBCGGGGGGCBCSSSS----SCBCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTT--TCCTTTTCCHHHHHH
T ss_pred             ECCcccceeccCCCceeEecc----cccCCcccCHHHHhC-CCCCccchhhhHHHHHHHHHhC--CCCCCCCCCHHHHHH
Confidence            999999987765432211100    001111 11344433 4445567888887777666641  012344455444443

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=98.51  E-value=8e-07  Score=85.01  Aligned_cols=86  Identities=20%  Similarity=0.200  Sum_probs=57.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCC----------CCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDG----------SSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLR   70 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~----------i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNIL   70 (444)
                      |||++|.+|.++........+..          ............ .....++..++++ +..+|..|++|+|++|.||+
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~qi~~~-l~~lH~~~ivH~dikp~NIl  182 (314)
T 2ivs_A          105 VEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM-GDLISFAWQISQG-MQYLAEMKLVHRDLAARNIL  182 (314)
T ss_dssp             EECCTTCBHHHHHHHTTTSTTEEC----------------CEECH-HHHHHHHHHHHHH-HHHHHHTTEECCCCSGGGEE
T ss_pred             EeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCH-HHHHHHHHHHHHH-HHHHHHCCCcccccchheEE
Confidence            79999999999886532100000          000000011111 1234566666655 88899999999999999999


Q ss_pred             EccCCcEEEEeccccccc
Q 013370           71 YTSSGQIGFLDFGLLCRM   88 (444)
Q Consensus        71 v~~DGrLvlLDFGmv~~L   88 (444)
                      ++.+|++.++|||+...+
T Consensus       183 i~~~~~~kl~Dfg~~~~~  200 (314)
T 2ivs_A          183 VAEGRKMKISDFGLSRDV  200 (314)
T ss_dssp             EETTTEEEECCCTTCEEC
T ss_pred             EcCCCCEEEccccccccc
Confidence            999999999999998655

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=98.51  E-value=1.2e-06  Score=85.97  Aligned_cols=76  Identities=20%  Similarity=0.212  Sum_probs=53.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.++.....+.       ++..+       ...++..++.+ +..|+..|++|+|++|.||+++.+|++.++
T Consensus       125 ~e~~~~~~L~~~l~~~~~~-------~~~~~-------~~~i~~qi~~a-L~~LH~~~ivH~Dikp~NIl~~~~~~~kl~  189 (333)
T 1mqb_A          125 TEYMENGALDKFLREKDGE-------FSVLQ-------LVGMLRGIAAG-MKYLANMNYVHRDLAARNILVNSNLVCKVS  189 (333)
T ss_dssp             EECCTTEEHHHHHHHTTTC-------SCHHH-------HHHHHHHHHHH-HHHHHHTTCCCSCCCGGGEEECTTCCEEEC
T ss_pred             EeCCCCCcHHHHHHhCCCC-------CCHHH-------HHHHHHHHHHH-HHHHHhCCeeCCCCChheEEECCCCcEEEC
Confidence            7999999999987643210       11111       23455555555 888999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...+...
T Consensus       190 Dfg~~~~~~~~  200 (333)
T 1mqb_A          190 DFGLSRVLEDD  200 (333)
T ss_dssp             CCCC-------
T ss_pred             CCCcchhhccc
Confidence            99999877543

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=98.51  E-value=5.2e-06  Score=85.78  Aligned_cols=73  Identities=21%  Similarity=0.287  Sum_probs=54.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEc---cCCcE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYT---SSGQI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~---~DGrL   77 (444)
                      |||++|+.|.+........+        +.       ....++..++.+ +..+|..|++|+|++|.||+++   .++.+
T Consensus       100 ~e~~~~~~L~~~~~~~~~~~--------~~-------~~~~i~~qi~~a-l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~  163 (486)
T 3mwu_A          100 GELYTGGELFDEIIKRKRFS--------EH-------DAARIIKQVFSG-ITYMHKHNIVHRDLKPENILLESKEKDCDI  163 (486)
T ss_dssp             ECCCCSCBHHHHHHHHSSCC--------HH-------HHHHHHHHHHHH-HHHHHHTTCCCSCCSGGGEEESSSSTTCCE
T ss_pred             EEcCCCCcHHHHHHhcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCeEeccCchHHEEEecCCCCCCE
Confidence            79999999988765433222        11       123556666655 8889999999999999999995   45689


Q ss_pred             EEEecccccccc
Q 013370           78 GFLDFGLLCRME   89 (444)
Q Consensus        78 vlLDFGmv~~L~   89 (444)
                      .++|||+...+.
T Consensus       164 kl~Dfg~a~~~~  175 (486)
T 3mwu_A          164 KIIDFGLSTCFQ  175 (486)
T ss_dssp             EECSCSCTTTBC
T ss_pred             EEEECCcCeECC
Confidence            999999987554

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=98.51  E-value=3.4e-07  Score=86.33  Aligned_cols=74  Identities=18%  Similarity=0.311  Sum_probs=56.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEE---ccCCcE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRY---TSSGQI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv---~~DGrL   77 (444)
                      |||++|..+.+........+        ..       ....++..++.+ +..++..|++|+|++|.||++   +.+|++
T Consensus        85 ~e~~~~~~L~~~~~~~~~~~--------~~-------~~~~i~~~i~~~-l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~  148 (277)
T 3f3z_A           85 MELCTGGELFERVVHKRVFR--------ES-------DAARIMKDVLSA-VAYCHKLNVAHRDLKPENFLFLTDSPDSPL  148 (277)
T ss_dssp             EECCCSCBHHHHHHHHCSCC--------HH-------HHHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEESSSSTTCCE
T ss_pred             EeccCCCcHHHHHHHcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCccCCCCCHHHEEEecCCCCCcE
Confidence            79999999988765432221        11       233566666655 888999999999999999999   778999


Q ss_pred             EEEecccccccch
Q 013370           78 GFLDFGLLCRMER   90 (444)
Q Consensus        78 vlLDFGmv~~L~~   90 (444)
                      .++|||+...+.+
T Consensus       149 ~l~Dfg~~~~~~~  161 (277)
T 3f3z_A          149 KLIDFGLAARFKP  161 (277)
T ss_dssp             EECCCTTCEECCT
T ss_pred             EEEecccceeccC
Confidence            9999999876653

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=98.51  E-value=7.8e-08  Score=93.09  Aligned_cols=75  Identities=19%  Similarity=0.244  Sum_probs=53.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.+|.++.......+        ..       ....++..++.+ +..++..|++|+|++|.||+++.+|++.++
T Consensus       113 ~e~~~~~~L~~~l~~~~~~~--------~~-------~~~~i~~qi~~~-l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~  176 (309)
T 2h34_A          113 MRLINGVDLAAMLRRQGPLA--------PP-------RAVAIVRQIGSA-LDAAHAAGATHRDVKPENILVSADDFAYLV  176 (309)
T ss_dssp             EECCCCEEHHHHHHHHCSCC--------HH-------HHHHHHHHHHHH-HHHHHHTTCCCSCCCGGGEEECTTSCEEEC
T ss_pred             EEecCCCCHHHHHHhcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCcCCcCCCChHHEEEcCCCCEEEe
Confidence            79999999999876432221        11       123455555555 888999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+.......
T Consensus       177 Dfg~~~~~~~~  187 (309)
T 2h34_A          177 DFGIASATTDE  187 (309)
T ss_dssp             SCCC-------
T ss_pred             cCccCcccccc
Confidence            99998776654

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=98.51  E-value=6e-07  Score=85.41  Aligned_cols=74  Identities=20%  Similarity=0.368  Sum_probs=57.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.++.......+        ..       ....++..++.+ +..++..|++|+|++|.||+++.+|++.++
T Consensus       103 ~e~~~~~~L~~~l~~~~~~~--------~~-------~~~~~~~qi~~~-l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~  166 (298)
T 1phk_A          103 FDLMKKGELFDYLTEKVTLS--------EK-------ETRKIMRALLEV-ICALHKLNIVHRDLKPENILLDDDMNIKLT  166 (298)
T ss_dssp             EECCTTCBHHHHHHHHSSCC--------HH-------HHHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEECTTCCEEEC
T ss_pred             EeccCCCcHHHHHhccCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCcccCCCCcceEEEcCCCcEEEe
Confidence            79999999998876432222        11       123566666655 788999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+++
T Consensus       167 dfg~~~~~~~  176 (298)
T 1phk_A          167 DFGFSCQLDP  176 (298)
T ss_dssp             CCTTCEECCT
T ss_pred             cccchhhcCC
Confidence            9999876643

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=98.50  E-value=2.1e-07  Score=88.25  Aligned_cols=115  Identities=13%  Similarity=0.085  Sum_probs=74.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCc----
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQ----   76 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGr----   76 (444)
                      |||++|.+|.++.....+       .++..+       ...++..++.+ +..|+..|++|+|++|.||+++.+|.    
T Consensus        91 ~e~~~~~~L~~~l~~~~~-------~~~~~~-------~~~i~~qi~~~-L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~  155 (289)
T 4fvq_A           91 QEFVKFGSLDTYLKKNKN-------CINILW-------KLEVAKQLAAA-MHFLEENTLIHGNVCAKNILLIREEDRKTG  155 (289)
T ss_dssp             EECCTTCBHHHHHHHTGG-------GCCHHH-------HHHHHHHHHHH-HHHHHHTTCCCCCCCGGGEEEEECCBGGGT
T ss_pred             EECCCCCCHHHHHHhCCC-------CCCHHH-------HHHHHHHHHHH-HHHHhhCCeECCCcCcceEEEecCCccccc
Confidence            799999999998764321       011111       23455555555 88899999999999999999999887    


Q ss_pred             ----EEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           77 ----IGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        77 ----LvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                          +.++|||+.....+....  ..      ...| ...+.+...+...+..|++.+..-+..++.
T Consensus       156 ~~~~~kl~Dfg~~~~~~~~~~~--~~------~~~y-~aPE~~~~~~~~~~~~DiwslG~il~el~~  213 (289)
T 4fvq_A          156 NPPFIKLSDPGISITVLPKDIL--QE------RIPW-VPPECIENPKNLNLATDKWSFGTTLWEICS  213 (289)
T ss_dssp             BCCEEEECCCCSCTTTSCHHHH--HH------TTTT-SCHHHHHCGGGCCHHHHHHHHHHHHHHHHT
T ss_pred             ccceeeeccCcccccccCcccc--CC------cCcc-cCHHHhCCCCCCCchhHHHHHHHHHHHHHc
Confidence                999999998777654321  11      1112 123444332334445677777666666554

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=98.50  E-value=4.2e-07  Score=87.19  Aligned_cols=118  Identities=14%  Similarity=0.167  Sum_probs=73.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..+.++.....+.+        ..       ....++..++.+ +..+|..|++|+|++|.||+++.+|.+.++
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~--------~~-------~~~~i~~~l~~~-l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~  144 (311)
T 4agu_A           81 FEYCDHTVLHELDRYQRGVP--------EH-------LVKSITWQTLQA-VNFCHKHNCIHRDVKPENILITKHSVIKLC  144 (311)
T ss_dssp             EECCSEEHHHHHHHTSSCCC--------HH-------HHHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEECTTSCEEEC
T ss_pred             EEeCCCchHHHHHhhhcCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCCcCCCCChhhEEEcCCCCEEEe
Confidence            79999998888765433332        11       123455555554 889999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||+...++......  .....  ...| ...+.+..-...++..|+..+..-+..++.
T Consensus       145 Dfg~~~~~~~~~~~~--~~~~~--~~~y-~aPE~~~~~~~~~~~~Di~slG~il~~l~~  198 (311)
T 4agu_A          145 DFGFARLLTGPSDYY--DDEVA--TRWY-RSPELLVGDTQYGPPVDVWAIGCVFAELLS  198 (311)
T ss_dssp             CCTTCEECC----------------GGG-CCHHHHHTCSCCCTHHHHHHHHHHHHHHHH
T ss_pred             eCCCchhccCccccc--CCCcC--Cccc-cChHHHhcCCCCCcchhhHHHHHHHHHHHh
Confidence            999998876432211  00000  0111 123444433344555677777666666554

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=98.49  E-value=1.1e-07  Score=97.25  Aligned_cols=115  Identities=15%  Similarity=0.098  Sum_probs=72.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+.......++        ..       ....++..++.+ +..||..|++|+|++|.||+++.+|++.++
T Consensus       132 ~E~~~gg~L~~~l~~~~~l~--------~~-------~~~~~~~qi~~a-L~~LH~~givHrDLKp~NILl~~~g~ikL~  195 (396)
T 4dc2_A          132 IEYVNGGDLMFHMQRQRKLP--------EE-------HARFYSAEISLA-LNYLHERGIIYRDLKLDNVLLDSEGHIKLT  195 (396)
T ss_dssp             EECCTTCBHHHHHHHHSSCC--------HH-------HHHHHHHHHHHH-HHHHHHTTCBCCCCCGGGEEECTTSCEEEC
T ss_pred             EEcCCCCcHHHHHHHcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCEEeccCCHHHEEECCCCCEEEe
Confidence            79999999988776433222        11       122445555444 889999999999999999999999999999


Q ss_pred             ecccccccc-hhhH-HhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRME-RKHQ-FAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~-~~~R-~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||++.... .... ..++.      ...| ...+.+..-+ .....|.+.+.--+..++.
T Consensus       196 DFGla~~~~~~~~~~~~~~g------t~~Y-~aPE~l~~~~-~~~~~DiwslGvllyell~  248 (396)
T 4dc2_A          196 DYGMCKEGLRPGDTTSTFCG------TPNY-IAPEILRGED-YGFSVDWWALGVLMFEMMA  248 (396)
T ss_dssp             CCTTCBCCCCTTCCBCCCCB------CGGG-CCHHHHTTCC-BCTHHHHHHHHHHHHHHHH
T ss_pred             ecceeeecccCCCccccccC------Cccc-CCchhhcCCC-CChHHHHHHHHHHHHHHHh
Confidence            999987632 2111 11110      0111 1234443322 3445677877766666654

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=98.49  E-value=7.1e-08  Score=93.28  Aligned_cols=75  Identities=21%  Similarity=0.456  Sum_probs=54.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.++.......+        ..       ....++..++.+ +..+|..|++|+|++|.||+++.+|++.++
T Consensus        95 ~e~~~g~~L~~~l~~~~~~~--------~~-------~~~~~~~qi~~~-l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~  158 (311)
T 3ork_A           95 MEYVDGVTLRDIVHTEGPMT--------PK-------RAIEVIADACQA-LNFSHQNGIIHRDVKPANIMISATNAVKVM  158 (311)
T ss_dssp             EECCCEEEHHHHHHHHCSCC--------HH-------HHHHHHHHHHHH-HHHHHHTTCCCCCCCGGGEEEETTSCEEEC
T ss_pred             EecCCCCCHHHHHHhcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCCCcCCCCHHHEEEcCCCCEEEe
Confidence            79999999999876432222        11       123555555555 888999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...+...
T Consensus       159 Dfg~a~~~~~~  169 (311)
T 3ork_A          159 DFGIARAIADS  169 (311)
T ss_dssp             CCSCC------
T ss_pred             eccCccccccc
Confidence            99999877653

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=98.49  E-value=1.6e-06  Score=82.71  Aligned_cols=73  Identities=19%  Similarity=0.241  Sum_probs=56.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.+|.++.......+        ..       ....++..++.+ +..++..|++|+|++|.||+++.+|++.++
T Consensus        96 ~e~~~~~~L~~~l~~~~~~~--------~~-------~~~~i~~qi~~~-l~~LH~~~i~H~dikp~Nil~~~~~~~kl~  159 (291)
T 1xbb_A           96 MEMAELGPLNKYLQQNRHVK--------DK-------NIIELVHQVSMG-MKYLEESNFVHRDLAARNVLLVTQHYAKIS  159 (291)
T ss_dssp             EECCTTEEHHHHHHHCTTCC--------HH-------HHHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEEEETTEEEEC
T ss_pred             EEeCCCCCHHHHHHhCcCCC--------HH-------HHHHHHHHHHHH-HHHHHhCCeEcCCCCcceEEEeCCCcEEEc
Confidence            79999999999876432121        11       123555555555 888999999999999999999999999999


Q ss_pred             ecccccccc
Q 013370           81 DFGLLCRME   89 (444)
Q Consensus        81 DFGmv~~L~   89 (444)
                      |||+...+.
T Consensus       160 Dfg~~~~~~  168 (291)
T 1xbb_A          160 DFGLSKALR  168 (291)
T ss_dssp             CCTTCEECC
T ss_pred             cCCcceeec
Confidence            999987664

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=98.49  E-value=2.6e-07  Score=87.28  Aligned_cols=75  Identities=20%  Similarity=0.296  Sum_probs=56.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCc---E
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQ---I   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGr---L   77 (444)
                      |||++|..+.+........+        ..       ....++..++.+ +..+|..|++|+|++|.||+++.+|+   +
T Consensus        84 ~e~~~~~~l~~~~~~~~~~~--------~~-------~~~~~~~~i~~~-l~~lH~~~i~H~dikp~Nil~~~~~~~~~~  147 (284)
T 3kk8_A           84 FDLVTGGELFEDIVAREFYS--------EA-------DASHCIQQILES-IAYCHSNGIVHRNLKPENLLLASKAKGAAV  147 (284)
T ss_dssp             ECCCCSCBHHHHHHHHSSCC--------HH-------HHHHHHHHHHHH-HHHHHHTTEECSCCCGGGEEESSSSTTCCE
T ss_pred             EecCCCCCHHHHHHhcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCcCcCCCCHHHEEEecCCCCCcE
Confidence            79999998877665432221        11       123455555554 88999999999999999999987765   9


Q ss_pred             EEEecccccccchh
Q 013370           78 GFLDFGLLCRMERK   91 (444)
Q Consensus        78 vlLDFGmv~~L~~~   91 (444)
                      .++|||+....+..
T Consensus       148 kl~Dfg~~~~~~~~  161 (284)
T 3kk8_A          148 KLADFGLAIEVNDS  161 (284)
T ss_dssp             EECCCTTCEECCSS
T ss_pred             EEeeceeeEEcccC
Confidence            99999999777653

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=98.49  E-value=1.2e-06  Score=82.95  Aligned_cols=75  Identities=20%  Similarity=0.104  Sum_probs=56.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.++.....+ +      ++..       ....++..++.+ +..+|..|++|+|++|.||+++.+|++.++
T Consensus        91 ~e~~~~~~L~~~l~~~~~-~------~~~~-------~~~~~~~~i~~~-l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~  155 (281)
T 3cc6_A           91 MELYPYGELGHYLERNKN-S------LKVL-------TLVLYSLQICKA-MAYLESINCVHRDIAVRNILVASPECVKLG  155 (281)
T ss_dssp             EECCTTCBHHHHHHHHTT-T------CCHH-------HHHHHHHHHHHH-HHHHHHTTCCCCCCSGGGEEEEETTEEEEC
T ss_pred             EecCCCCCHHHHHHhccc-c------CCHH-------HHHHHHHHHHHH-HHHHHHCCcccCCCccceEEECCCCcEEeC
Confidence            799999999988764321 0      1111       123455555554 888999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+..
T Consensus       156 Dfg~~~~~~~  165 (281)
T 3cc6_A          156 DFGLSRYIED  165 (281)
T ss_dssp             CCCGGGCC--
T ss_pred             ccCCCccccc
Confidence            9999876654

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=98.49  E-value=1.2e-07  Score=91.65  Aligned_cols=74  Identities=22%  Similarity=0.420  Sum_probs=58.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.++.... +.+        +.       ....++..++.+ +..++..|++|+|++|.||+++.+|++.++
T Consensus        96 ~e~~~~~~L~~~~~~~-~~~--------~~-------~~~~~~~qi~~~-l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~  158 (297)
T 3fxz_A           96 MEYLAGGSLTDVVTET-CMD--------EG-------QIAAVCRECLQA-LEFLHSNQVIHRDIKSDNILLGMDGSVKLT  158 (297)
T ss_dssp             EECCTTCBHHHHHHHS-CCC--------HH-------HHHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEECTTCCEEEC
T ss_pred             EECCCCCCHHHHHhhc-CCC--------HH-------HHHHHHHHHHHH-HHHHHhCCceeCCCCHHHEEECCCCCEEEe
Confidence            7999999999987532 221        11       123556666554 888999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...+++.
T Consensus       159 Dfg~~~~~~~~  169 (297)
T 3fxz_A          159 DFGFCAQITPE  169 (297)
T ss_dssp             CCTTCEECCST
T ss_pred             eCCCceecCCc
Confidence            99998877654

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=98.48  E-value=1.4e-06  Score=82.67  Aligned_cols=74  Identities=18%  Similarity=0.188  Sum_probs=56.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+.|+.|.+......+.       ++..+       ...++..++.+ +..||..|++|+|++|.||+++.+|++.++
T Consensus       102 ~e~~~~~~L~~~~~~~~~~-------~~~~~-------~~~i~~qi~~~-l~~LH~~~i~H~dikp~Nili~~~~~~kl~  166 (298)
T 3pls_A          102 LPYMCHGDLLQFIRSPQRN-------PTVKD-------LISFGLQVARG-MEYLAEQKFVHRDLAARNCMLDESFTVKVA  166 (298)
T ss_dssp             ECCCTTCBHHHHHHCTTCC-------CBHHH-------HHHHHHHHHHH-HHHHHHTTCCCSCCSGGGEEECTTCCEEEC
T ss_pred             EecccCCCHHHHHhccccC-------CCHHH-------HHHHHHHHHHH-HHHHHhCCcccCCCCcceEEEcCCCcEEeC
Confidence            7899999998887542111       11111       23455555555 889999999999999999999999999999


Q ss_pred             ecccccccc
Q 013370           81 DFGLLCRME   89 (444)
Q Consensus        81 DFGmv~~L~   89 (444)
                      |||+...+.
T Consensus       167 Dfg~~~~~~  175 (298)
T 3pls_A          167 DFGLARDIL  175 (298)
T ss_dssp             CTTSSCTTT
T ss_pred             cCCCccccc
Confidence            999987553

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=98.48  E-value=1.8e-07  Score=91.13  Aligned_cols=120  Identities=18%  Similarity=0.185  Sum_probs=67.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcC--ccccCCCCCCeEEccCCcEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETG--ILHADPHPGNLRYTSSGQIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~G--fFHADPHPGNILv~~DGrLv   78 (444)
                      |||++|++|.++......           ....+. .....++..++.+ +..|+..|  ++|+|++|.||+++.+|++.
T Consensus       113 ~e~~~~~~L~~~l~~~~~-----------~~~~~~-~~~~~i~~qi~~a-L~~LH~~~~~ivH~Dikp~NIll~~~~~~k  179 (309)
T 3p86_A          113 TEYLSRGSLYRLLHKSGA-----------REQLDE-RRRLSMAYDVAKG-MNYLHNRNPPIVHRNLKSPNLLVDKKYTVK  179 (309)
T ss_dssp             EECCTTCBHHHHHHSTTH-----------HHHSCH-HHHHHHHHHHHHH-HHHHHTSSSCCCCTTCCGGGEEECTTCCEE
T ss_pred             EecCCCCcHHHHHhhcCC-----------CCCCCH-HHHHHHHHHHHHH-HHHHHcCCCCEECCCCChhhEEEeCCCcEE
Confidence            799999999988763210           001111 1223455555555 88899999  99999999999999999999


Q ss_pred             EEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           79 FLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        79 lLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      ++|||+...........-    .......| ...+.+.. +...+..|++.+..-+..++.
T Consensus       180 L~Dfg~a~~~~~~~~~~~----~~~gt~~y-~aPE~~~~-~~~~~~~DiwslG~il~ellt  234 (309)
T 3p86_A          180 VCDFGLSRLKASTFLSSK----SAAGTPEW-MAPEVLRD-EPSNEKSDVYSFGVILWELAT  234 (309)
T ss_dssp             ECCCC---------------------CCTT-SCHHHHTT-CCCCTTHHHHHHHHHHHHHHH
T ss_pred             ECCCCCCccccccccccc----cCCCCccc-cChhhhcC-CCCCchhhHHHHHHHHHHHHh
Confidence            999999875443321110    00111112 12333332 223455677777666666554

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=98.48  E-value=1.8e-07  Score=96.02  Aligned_cols=75  Identities=24%  Similarity=0.309  Sum_probs=57.5

Q ss_pred             CCCcCCCCcccHHhhcC-CCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLST-GSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~-G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      |||++|+.|.++..... .++        .+.       ...++..++.+ +..+|..|++|+|++|.||+++.+|++.+
T Consensus       140 mE~~~gg~L~~~l~~~~~~l~--------~~~-------~~~~~~qi~~a-L~~LH~~giiHrDLKp~NILld~~g~vkL  203 (412)
T 2vd5_A          140 MEYYVGGDLLTLLSKFGERIP--------AEM-------ARFYLAEIVMA-IDSVHRLGYVHRDIKPDNILLDRCGHIRL  203 (412)
T ss_dssp             ECCCCSCBHHHHHHHHSSCCC--------HHH-------HHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEECTTSCEEE
T ss_pred             EcCCCCCcHHHHHHhcCCCCC--------HHH-------HHHHHHHHHHH-HHHHHHCCeeecccCHHHeeecCCCCEEE
Confidence            89999999999876432 121        111       12344444444 88899999999999999999999999999


Q ss_pred             Eecccccccchh
Q 013370           80 LDFGLLCRMERK   91 (444)
Q Consensus        80 LDFGmv~~L~~~   91 (444)
                      .|||++..+...
T Consensus       204 ~DFGla~~~~~~  215 (412)
T 2vd5_A          204 ADFGSCLKLRAD  215 (412)
T ss_dssp             CCCTTCEECCTT
T ss_pred             eechhheeccCC
Confidence            999999887653

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=98.48  E-value=1.4e-06  Score=84.56  Aligned_cols=72  Identities=28%  Similarity=0.274  Sum_probs=55.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHc---------CccccCCCCCCeEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLET---------GILHADPHPGNLRY   71 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~---------GfFHADPHPGNILv   71 (444)
                      |||++|+.|.++..... .+        ..       ....++..++.+ +..|+..         |++|+|++|.||++
T Consensus        91 ~e~~~~g~L~~~l~~~~-~~--------~~-------~~~~i~~qi~~~-L~~LH~~~~~~~~~~~~ivH~Dikp~Nill  153 (336)
T 3g2f_A           91 MEYYPNGSLXKYLSLHT-SD--------WV-------SSCRLAHSVTRG-LAYLHTELPRGDHYKPAISHRDLNSRNVLV  153 (336)
T ss_dssp             ECCCTTCBHHHHHHHCC-BC--------HH-------HHHHHHHHHHHH-HHHHHCCBCCGGGCBCCEECSSCSGGGEEE
T ss_pred             EecCCCCcHHHHHhhcc-cc--------hh-------HHHHHHHHHHHH-HHHHHhhhccccccccceeecccccceEEE
Confidence            79999999999875421 11        11       123455555554 8889988         99999999999999


Q ss_pred             ccCCcEEEEecccccccc
Q 013370           72 TSSGQIGFLDFGLLCRME   89 (444)
Q Consensus        72 ~~DGrLvlLDFGmv~~L~   89 (444)
                      +.+|++.++|||+...++
T Consensus       154 ~~~~~~kL~DFG~a~~~~  171 (336)
T 3g2f_A          154 KNDGTCVISDFGLSMRLT  171 (336)
T ss_dssp             CTTSCEEECCCTTCEECS
T ss_pred             cCCCcEEEeeccceeecc
Confidence            999999999999997654

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=98.48  E-value=1.7e-07  Score=96.10  Aligned_cols=74  Identities=27%  Similarity=0.412  Sum_probs=57.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.++..- .+.+        +..       ...++..++.+ +..||..|++|+|++|.||+++.+|++.++
T Consensus       148 ~E~~~gg~L~~~l~~-~~~~--------e~~-------~~~~~~qi~~a-L~~LH~~givHrDLKp~NILl~~~g~ikL~  210 (410)
T 3v8s_A          148 MEYMPGGDLVNLMSN-YDVP--------EKW-------ARFYTAEVVLA-LDAIHSMGFIHRDVKPDNMLLDKSGHLKLA  210 (410)
T ss_dssp             ECCCTTEEHHHHHHH-CCCC--------HHH-------HHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEECTTSCEEEC
T ss_pred             EeCCCCCcHHHHHHc-CCCC--------HHH-------HHHHHHHHHHH-HHHHHHCCeEeccCCHHHeeECCCCCEEEe
Confidence            899999999988753 2221        111       22345555544 889999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||++..+...
T Consensus       211 DFG~a~~~~~~  221 (410)
T 3v8s_A          211 DFGTCMKMNKE  221 (410)
T ss_dssp             CCTTCEECCTT
T ss_pred             ccceeEeeccC
Confidence            99999877654

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=98.47  E-value=8.7e-07  Score=83.84  Aligned_cols=75  Identities=20%  Similarity=0.161  Sum_probs=56.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.+|.++.....+.+      ++..       ....++..++.+ +..+|..|++|+|++|.||+++.+|++.++
T Consensus        88 ~e~~~~~~L~~~~~~~~~~~------~~~~-------~~~~i~~~i~~~-l~~lH~~~i~H~dikp~Nil~~~~~~~~l~  153 (288)
T 3kfa_A           88 TEFMTYGNLLDYLRECNRQE------VSAV-------VLLYMATQISSA-MEYLEKKNFIHRDLAARNCLVGENHLVKVA  153 (288)
T ss_dssp             EECCTTEEHHHHHHHCCTTT------SCHH-------HHHHHHHHHHHH-HHHHHHHTCCCSCCSGGGEEECGGGCEEEC
T ss_pred             EEcCCCCcHHHHHHhcccCC------ccHh-------HHHHHHHHHHHH-HHHHHHCCccCCCCCcceEEEcCCCCEEEc
Confidence            79999999999876432111      1111       123455555555 888999999999999999999999999999


Q ss_pred             ecccccccc
Q 013370           81 DFGLLCRME   89 (444)
Q Consensus        81 DFGmv~~L~   89 (444)
                      |||+...++
T Consensus       154 Dfg~~~~~~  162 (288)
T 3kfa_A          154 DFGLSRLMT  162 (288)
T ss_dssp             CCCGGGTSC
T ss_pred             cCccceecc
Confidence            999987554

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=98.47  E-value=3.1e-07  Score=90.04  Aligned_cols=75  Identities=25%  Similarity=0.379  Sum_probs=55.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCC---cE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG---QI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DG---rL   77 (444)
                      |||++|+.|.+.......++        +.+       ...++..++.+ +..||..|++|+|++|.||+++.+|   ++
T Consensus        85 ~e~~~~~~L~~~l~~~~~~~--------~~~-------~~~i~~qi~~~-l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~  148 (325)
T 3kn6_A           85 MELLNGGELFERIKKKKHFS--------ETE-------ASYIMRKLVSA-VSHMHDVGVVHRDLKPENLLFTDENDNLEI  148 (325)
T ss_dssp             ECCCCSCBHHHHHHHCSCCC--------HHH-------HHHHHHHHHHH-HHHHHHTTEECCCCCGGGEEEEC----CEE
T ss_pred             EEccCCCcHHHHHHhcCCCC--------HHH-------HHHHHHHHHHH-HHHHHHCCCeecCCCHHHEEEecCCCcccE
Confidence            79999999998876432222        111       23455555555 8889999999999999999998876   89


Q ss_pred             EEEecccccccchh
Q 013370           78 GFLDFGLLCRMERK   91 (444)
Q Consensus        78 vlLDFGmv~~L~~~   91 (444)
                      .++|||+....++.
T Consensus       149 kl~Dfg~a~~~~~~  162 (325)
T 3kn6_A          149 KIIDFGFARLKPPD  162 (325)
T ss_dssp             EECCCTTCEECCC-
T ss_pred             EEeccccceecCCC
Confidence            99999999876654

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=98.47  E-value=4.8e-07  Score=86.99  Aligned_cols=116  Identities=17%  Similarity=0.187  Sum_probs=71.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++| .|.++.....+.      .++..       ....++..++.+ +..||..|++|+|++|.||+++.+|++.++
T Consensus        98 ~e~~~~-~L~~~~~~~~~~------~~~~~-------~~~~i~~qi~~a-l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~  162 (308)
T 3g33_A           98 FEHVDQ-DLRTYLDKAPPP------GLPAE-------TIKDLMRQFLRG-LDFLHANCIVHRDLKPENILVTSGGTVKLA  162 (308)
T ss_dssp             EECCCC-BHHHHHHTCCTT------CSCHH-------HHHHHHHHHHHH-HHHHHHTTCCCSCCCTTTEEECTTSCEEEC
T ss_pred             ehhhhc-CHHHHHhhccCC------CCCHH-------HHHHHHHHHHHH-HHHHHHCCcccCCCCHHHEEEcCCCCEEEe
Confidence            688886 666665432210      01122       123556666555 889999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHH
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDAL  138 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l  138 (444)
                      |||+...++......-.     .....| ...+.+.. +...+..|++.+.--+..++
T Consensus       163 Dfg~a~~~~~~~~~~~~-----~gt~~y-~aPE~~~~-~~~~~~~DiwslG~il~~l~  213 (308)
T 3g33_A          163 DFGLARIYSYQMALTPV-----VVTLWY-RAPEVLLQ-STYATPVDMWSVGCIFAEMF  213 (308)
T ss_dssp             SCSCTTTSTTCCCSGGG-----GCCCSS-CCHHHHHT-SCCCSTHHHHHHHHHHHHTT
T ss_pred             eCccccccCCCcccCCc-----cccccc-cCchHHcC-CCCCchHHHHHHHHHHHHHH
Confidence            99999876543221100     001111 12333333 23445577777765555544

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=98.47  E-value=2.2e-06  Score=85.66  Aligned_cols=81  Identities=14%  Similarity=0.202  Sum_probs=58.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCC--------CCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEc
Q 013370            1 MEWMVGESPTDLISLSTGSSVD--------GSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYT   72 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~--------~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~   72 (444)
                      |||++|+.|.++..........        ....++..       ....++..++.+ +..|+..|++|+|++|.||+++
T Consensus       154 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~-------~~~~i~~qi~~a-L~~LH~~~ivH~Dlkp~NIll~  225 (382)
T 3tt0_A          154 VEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK-------DLVSCAYQVARG-MEYLASKKCIHRDLAARNVLVT  225 (382)
T ss_dssp             EECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHH-------HHHHHHHHHHHH-HHHHHHTTCCCSCCCGGGEEEC
T ss_pred             EEecCCCcHHHHHHHhcccccccccccccccccccCHH-------HHHHHHHHHHHH-HHHHHhCCEecCCCCcceEEEc
Confidence            7999999999988754210000        00011222       223555555555 8889999999999999999999


Q ss_pred             cCCcEEEEecccccccc
Q 013370           73 SSGQIGFLDFGLLCRME   89 (444)
Q Consensus        73 ~DGrLvlLDFGmv~~L~   89 (444)
                      .+|++.++|||+...+.
T Consensus       226 ~~~~~kL~DFG~a~~~~  242 (382)
T 3tt0_A          226 EDNVMKIADFGLARDIH  242 (382)
T ss_dssp             TTCCEEECSCSCCCCSS
T ss_pred             CCCcEEEcccCcccccc
Confidence            99999999999987554

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=98.46  E-value=7.5e-07  Score=86.76  Aligned_cols=72  Identities=21%  Similarity=0.212  Sum_probs=55.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHc----------CccccCCCCCCeE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLET----------GILHADPHPGNLR   70 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~----------GfFHADPHPGNIL   70 (444)
                      |||++|++|.++.... ..        +..       ....++..++.+ +..|+..          |++|+|++|.||+
T Consensus       101 ~e~~~~g~L~~~l~~~-~~--------~~~-------~~~~i~~qi~~a-l~~LH~~~~~l~~~~~~~ivH~Dlkp~Nil  163 (322)
T 3soc_A          101 TAFHEKGSLSDFLKAN-VV--------SWN-------ELCHIAETMARG-LAYLHEDIPGLKDGHKPAISHRDIKSKNVL  163 (322)
T ss_dssp             EECCTTCBHHHHHHHC-CB--------CHH-------HHHHHHHHHHHH-HHHHTCCEEEETTEEECEEECSCCSGGGEE
T ss_pred             EecCCCCCHHHHHHhc-CC--------CHH-------HHHHHHHHHHHH-HHHHHhhccccccccCCCEEeCCCChHhEE
Confidence            7999999999987532 11        111       123455555555 7888888          9999999999999


Q ss_pred             EccCCcEEEEecccccccc
Q 013370           71 YTSSGQIGFLDFGLLCRME   89 (444)
Q Consensus        71 v~~DGrLvlLDFGmv~~L~   89 (444)
                      ++.+|++.++|||+...++
T Consensus       164 l~~~~~~kL~DFg~a~~~~  182 (322)
T 3soc_A          164 LKNNLTACIADFGLALKFE  182 (322)
T ss_dssp             ECTTCCEEECCCTTCEEEC
T ss_pred             ECCCCeEEEccCCcccccc
Confidence            9999999999999986543

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=98.46  E-value=1.2e-07  Score=90.48  Aligned_cols=76  Identities=18%  Similarity=0.207  Sum_probs=55.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|++|.++.....+       .++..       ....++..++.+ +..||..|++|+|++|.||+++.+|++.++
T Consensus        92 ~e~~~~~~L~~~l~~~~~-------~~~~~-------~~~~~~~qi~~~-l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~  156 (295)
T 3ugc_A           92 MEYLPYGSLRDYLQKHKE-------RIDHI-------KLLQYTSQICKG-MEYLGTKRYIHRDLATRNILVENENRVKIG  156 (295)
T ss_dssp             EECCTTCBHHHHHHHCGG-------GCCHH-------HHHHHHHHHHHH-HHHHHHTTCCCSCCSGGGEEEEETTEEEEC
T ss_pred             EEeCCCCCHHHHHHhccc-------ccCHH-------HHHHHHHHHHHH-HHHHhcCCcccCCCCHhhEEEcCCCeEEEc
Confidence            799999999998764321       01111       123455555555 888999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...++..
T Consensus       157 Dfg~~~~~~~~  167 (295)
T 3ugc_A          157 DFGLTKVLPQD  167 (295)
T ss_dssp             CCCSCC-----
T ss_pred             cCcccccccCC
Confidence            99999877654

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=98.46  E-value=1.4e-07  Score=92.58  Aligned_cols=76  Identities=26%  Similarity=0.362  Sum_probs=57.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEcc--CCcEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTS--SGQIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~--DGrLv   78 (444)
                      |||++|+.|.+......+       .+++.+       ...++..++.+ +..+|..|++|+|++|.||+++.  +|.+.
T Consensus        80 ~e~~~g~~L~~~l~~~~~-------~~~~~~-------~~~i~~qi~~a-l~~lH~~givH~Dlkp~NIl~~~~~~~~~k  144 (321)
T 1tki_A           80 FEFISGLDIFERINTSAF-------ELNERE-------IVSYVHQVCEA-LQFLHSHNIGHFDIRPENIIYQTRRSSTIK  144 (321)
T ss_dssp             ECCCCCCBHHHHHTSSSC-------CCCHHH-------HHHHHHHHHHH-HHHHHHTTEECCCCCGGGEEESSSSCCCEE
T ss_pred             EEeCCCCCHHHHHHhcCC-------CCCHHH-------HHHHHHHHHHH-HHHHHHCCCCcCCCCHHHEEEccCCCCCEE
Confidence            799999999887753211       112221       23556666655 88899999999999999999997  79999


Q ss_pred             EEecccccccchh
Q 013370           79 FLDFGLLCRMERK   91 (444)
Q Consensus        79 lLDFGmv~~L~~~   91 (444)
                      ++|||+...+.+.
T Consensus       145 l~Dfg~a~~~~~~  157 (321)
T 1tki_A          145 IIEFGQARQLKPG  157 (321)
T ss_dssp             ECCCTTCEECCTT
T ss_pred             EEECCCCeECCCC
Confidence            9999999887653

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=98.45  E-value=1.5e-06  Score=81.93  Aligned_cols=75  Identities=27%  Similarity=0.376  Sum_probs=56.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.+|.++.....+            ..... .....++..++.+ +..+|..|++|+|++|.||+++.+|++.++
T Consensus        86 ~e~~~~~~L~~~l~~~~~------------~~~~~-~~~~~i~~qi~~~-l~~lH~~~i~H~dikp~Nil~~~~~~~kl~  151 (279)
T 1qpc_A           86 TEYMENGSLVDFLKTPSG------------IKLTI-NKLLDMAAQIAEG-MAFIEERNYIHRDLRAANILVSDTLSCKIA  151 (279)
T ss_dssp             EECCTTCBHHHHTTSHHH------------HTCCH-HHHHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEECTTSCEEEC
T ss_pred             EecCCCCCHHHHHhcCCC------------CCCCH-HHHHHHHHHHHHH-HHHHHHCCeeccCCCHhhEEEcCCCCEEEC
Confidence            799999999888653211            01111 1233556666555 888999999999999999999999999999


Q ss_pred             ecccccccc
Q 013370           81 DFGLLCRME   89 (444)
Q Consensus        81 DFGmv~~L~   89 (444)
                      |||+...+.
T Consensus       152 Dfg~~~~~~  160 (279)
T 1qpc_A          152 DFGLARLIE  160 (279)
T ss_dssp             CCTTCEECS
T ss_pred             CCccccccc
Confidence            999987654

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=98.45  E-value=1.3e-06  Score=83.90  Aligned_cols=80  Identities=18%  Similarity=0.152  Sum_probs=54.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|++|.++........  .-..++..       ....++..++.+ +..++..|++|+|.+|.||+++.+|++.++
T Consensus       120 ~e~~~~~~L~~~l~~~~~~~--~~~~~~~~-------~~~~i~~qi~~a-L~~LH~~~ivH~dikp~NIli~~~~~~kl~  189 (313)
T 3brb_A          120 LPFMKYGDLHTYLLYSRLET--GPKHIPLQ-------TLLKFMVDIALG-MEYLSNRNFLHRDLAARNCMLRDDMTVCVA  189 (313)
T ss_dssp             EECCTTCBHHHHHHHTTBTT--SCCCCCHH-------HHHHHHHHHHHH-HHHHHTTTCCCCCCSGGGEEECTTSCEEEC
T ss_pred             EecccCCCHHHHHHHhhhhc--CCccCCHH-------HHHHHHHHHHHH-HHHHHhCCcccCCCCcceEEEcCCCcEEEe
Confidence            78999999999875321000  00011122       223555655555 888999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+..
T Consensus       190 Dfg~~~~~~~  199 (313)
T 3brb_A          190 DFGLSKKIYS  199 (313)
T ss_dssp             SCSCC-----
T ss_pred             ecCcceeccc
Confidence            9999887654

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=98.45  E-value=3.8e-07  Score=88.65  Aligned_cols=74  Identities=20%  Similarity=0.231  Sum_probs=56.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.++.....+       .++..       ....++..++.+ +..|+..|++|+|++|.||+++.+|++.++
T Consensus       105 ~e~~~~~~L~~~l~~~~~-------~~~~~-------~~~~i~~qi~~a-l~~lH~~~ivH~Dikp~NIl~~~~~~~kl~  169 (327)
T 3lxl_A          105 MEYLPSGCLRDFLQRHRA-------RLDAS-------RLLLYSSQICKG-MEYLGSRRCVHRDLAARNILVESEAHVKIA  169 (327)
T ss_dssp             EECCTTCBHHHHHHHHGG-------GCCHH-------HHHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEEEETTEEEEC
T ss_pred             EeecCCCCHHHHHHhccc-------CCCHH-------HHHHHHHHHHHH-HHHHHhCCccCCCCChhhEEECCCCCEEEc
Confidence            799999999998764221       01111       223555555555 888999999999999999999999999999


Q ss_pred             ecccccccc
Q 013370           81 DFGLLCRME   89 (444)
Q Consensus        81 DFGmv~~L~   89 (444)
                      |||+...++
T Consensus       170 Dfg~~~~~~  178 (327)
T 3lxl_A          170 DFGLAKLLP  178 (327)
T ss_dssp             CGGGCEECC
T ss_pred             ccccceecc
Confidence            999987543

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=98.45  E-value=3.1e-07  Score=95.03  Aligned_cols=117  Identities=18%  Similarity=0.175  Sum_probs=73.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEc---cCCcE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYT---SSGQI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~---~DGrL   77 (444)
                      |||++|+.|.+........+        +.       ....++..++.+ +..+|..|++|+|++|.||+++   .+|.+
T Consensus        89 ~E~~~gg~L~~~i~~~~~~~--------e~-------~~~~i~~qil~a-L~~lH~~givHrDlKp~NIll~~~~~~~~v  152 (444)
T 3soa_A           89 FDLVTGGELFEDIVAREYYS--------EA-------DASHCIQQILEA-VLHCHQMGVVHRNLKPENLLLASKLKGAAV  152 (444)
T ss_dssp             ECCCBCCBHHHHHHHCSCCC--------HH-------HHHHHHHHHHHH-HHHHHHTTCBCCCCSSTTEEESBSSTTCCE
T ss_pred             EEeCCCCCHHHHHHHcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCccccCCCHHHEEEeccCCCCcE
Confidence            79999999988776432222        21       123456666555 7889999999999999999998   46899


Q ss_pred             EEEecccccccchhhHHhHHHHHHHHHhCCH-HHHHHHHHhcCCCCCCCChHHHHHHHHHHHhc
Q 013370           78 GFLDFGLLCRMERKHQFAMLASIVHIVNGDW-QSLVHSLTEMDVVRPGTNTLRVTMDLEDALGE  140 (444)
Q Consensus        78 vlLDFGmv~~L~~~~R~~l~~ll~alv~~D~-~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~~  140 (444)
                      .++|||+...+........ .     ..+.. ....+.+.. +-..+..|++.+.--+..++..
T Consensus       153 kL~DFG~a~~~~~~~~~~~-~-----~~gt~~Y~APE~l~~-~~~~~~~DIwSlGvilyell~G  209 (444)
T 3soa_A          153 KLADFGLAIEVEGEQQAWF-G-----FAGTPGYLSPEVLRK-DPYGKPVDLWACGVILYILLVG  209 (444)
T ss_dssp             EECCCSSCBCCCTTCCBCC-C-----SCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHS
T ss_pred             EEccCceeEEecCCCceee-c-----ccCCcccCCHHHhcC-CCCCCccccHHHHHHHHHHHhC
Confidence            9999999987765422100 0     00111 111333332 2234456777776666665543

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=98.45  E-value=2.5e-07  Score=92.32  Aligned_cols=73  Identities=18%  Similarity=0.110  Sum_probs=53.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCc--EE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQ--IG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGr--Lv   78 (444)
                      |||++|+.|.+.......++        ..       ....++..++.+ +..+|..|++|+|++|.||+++.+|.  +.
T Consensus        95 ~e~~~~~~L~~~l~~~~~~~--------~~-------~~~~i~~ql~~~-L~~LH~~~ivH~Dlkp~Nill~~~~~~~~k  158 (361)
T 3uc3_A           95 MEYASGGELYERICNAGRFS--------ED-------EARFFFQQLLSG-VSYCHSMQICHRDLKLENTLLDGSPAPRLK  158 (361)
T ss_dssp             EECCCSCBHHHHHHHHSSCC--------HH-------HHHHHHHHHHHH-HHHHHHTTCCSCCCCGGGEEECSSSSCCEE
T ss_pred             EEeCCCCCHHHHHHhcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCcccCCCCHHHEEEcCCCCceEE
Confidence            79999999988875433222        11       123556666555 88899999999999999999987764  99


Q ss_pred             EEecccccccc
Q 013370           79 FLDFGLLCRME   89 (444)
Q Consensus        79 lLDFGmv~~L~   89 (444)
                      ++|||+.....
T Consensus       159 l~Dfg~a~~~~  169 (361)
T 3uc3_A          159 ICDFGYSKSSV  169 (361)
T ss_dssp             ECCCCCC----
T ss_pred             EeecCcccccc
Confidence            99999886443

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=98.45  E-value=3.4e-06  Score=87.72  Aligned_cols=74  Identities=19%  Similarity=0.299  Sum_probs=56.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCC---cE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG---QI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DG---rL   77 (444)
                      |||++|+.|.+........+        ..       ....++..++.+ +..||..|++|+|++|.||+++.+|   ++
T Consensus       125 ~e~~~gg~L~~~l~~~~~~~--------~~-------~~~~i~~qi~~~-l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~  188 (504)
T 3q5i_A          125 TEFYEGGELFEQIINRHKFD--------EC-------DAANIMKQILSG-ICYLHKHNIVHRDIKPENILLENKNSLLNI  188 (504)
T ss_dssp             EECCTTCBHHHHHHHHSCCC--------HH-------HHHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEESSTTCCSSE
T ss_pred             EecCCCCcHHHHHHHcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCeEeCCCcHHHEEEecCCCCccE
Confidence            79999999988765433222        11       123456665555 8889999999999999999999887   69


Q ss_pred             EEEecccccccch
Q 013370           78 GFLDFGLLCRMER   90 (444)
Q Consensus        78 vlLDFGmv~~L~~   90 (444)
                      .++|||+...++.
T Consensus       189 kl~Dfg~a~~~~~  201 (504)
T 3q5i_A          189 KIVDFGLSSFFSK  201 (504)
T ss_dssp             EECCCTTCEECCT
T ss_pred             EEEECCCCEEcCC
Confidence            9999999876654

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=98.45  E-value=1.2e-07  Score=93.02  Aligned_cols=74  Identities=24%  Similarity=0.340  Sum_probs=57.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+......+++        ..       ....++..++.+ +..|+..|++|+|++|+||+++.+|++.++
T Consensus        84 ~e~~~~~~L~~~l~~~~~~~--------~~-------~~~~i~~qi~~a-L~~LH~~givH~Dlkp~NIll~~~~~~kl~  147 (323)
T 3tki_A           84 LEYCSGGELFDRIEPDIGMP--------EP-------DAQRFFHQLMAG-VVYLHGIGITHRDIKPENLLLDERDNLKIS  147 (323)
T ss_dssp             EECCTTEEGGGGSBTTTBCC--------HH-------HHHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEECTTCCEEEC
T ss_pred             EEcCCCCcHHHHHhhcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCccccccchHHEEEeCCCCEEEE
Confidence            79999999988765322222        11       123556666655 888999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+..
T Consensus       148 Dfg~a~~~~~  157 (323)
T 3tki_A          148 DFGLATVFRY  157 (323)
T ss_dssp             CCTTCEECEE
T ss_pred             Eeeccceecc
Confidence            9999986643

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=98.44  E-value=2.2e-07  Score=87.60  Aligned_cols=79  Identities=22%  Similarity=0.288  Sum_probs=55.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcC-----ccccCCCCCCeEEccCC
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETG-----ILHADPHPGNLRYTSSG   75 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~G-----fFHADPHPGNILv~~DG   75 (444)
                      |||++|.+|.++........    ..++..       ....++..++.+ +..++..|     ++|+|++|.||+++.+|
T Consensus        86 ~e~~~~~~L~~~l~~~~~~~----~~~~~~-------~~~~i~~~i~~~-l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~  153 (279)
T 2w5a_A           86 MEYCEGGDLASVITKGTKER----QYLDEE-------FVLRVMTQLTLA-LKECHRRSDGGHTVLHRDLKPANVFLDGKQ  153 (279)
T ss_dssp             EECCTTEEHHHHHHHHHHTT----CCCCHH-------HHHHHHHHHHHH-HHHHHHHC------CCCCCSGGGEEECSSS
T ss_pred             EeCCCCCCHHHHHHhhcccC----CCCCHH-------HHHHHHHHHHHH-HHHHhcccCCCCeeEEeccchhhEEEcCCC
Confidence            79999999998876421000    001111       233556655555 78899999     99999999999999999


Q ss_pred             cEEEEecccccccchh
Q 013370           76 QIGFLDFGLLCRMERK   91 (444)
Q Consensus        76 rLvlLDFGmv~~L~~~   91 (444)
                      ++.++|||+...+...
T Consensus       154 ~~kl~dfg~~~~~~~~  169 (279)
T 2w5a_A          154 NVKLGDFGLARILNHD  169 (279)
T ss_dssp             CEEECCCCHHHHC---
T ss_pred             CEEEecCchheeeccc
Confidence            9999999998877654

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=98.44  E-value=2.9e-07  Score=90.17  Aligned_cols=74  Identities=19%  Similarity=0.343  Sum_probs=57.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCC----c
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG----Q   76 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DG----r   76 (444)
                      |||++|+.|.++......+        +..+       ...++..++.+ +..||..|++|+|++|.||+++.+|    +
T Consensus        93 ~e~~~~~~L~~~l~~~~~~--------~~~~-------~~~i~~qi~~a-l~~lH~~~ivH~Dlkp~NIll~~~~~~~~~  156 (326)
T 2y0a_A           93 LELVAGGELFDFLAEKESL--------TEEE-------ATEFLKQILNG-VYYLHSLQIAHFDLKPENIMLLDRNVPKPR  156 (326)
T ss_dssp             EECCCSCBHHHHHTTSSCC--------BHHH-------HHHHHHHHHHH-HHHHHHTTEECCCCCGGGEEESCSSSSSCC
T ss_pred             EEcCCCCCHHHHHHhcCCc--------CHHH-------HHHHHHHHHHH-HHHHHHCCeEcCCCCHHHEEEecCCCCCCC
Confidence            7999999999987532211        2222       23455555555 7889999999999999999999887    8


Q ss_pred             EEEEecccccccch
Q 013370           77 IGFLDFGLLCRMER   90 (444)
Q Consensus        77 LvlLDFGmv~~L~~   90 (444)
                      +.++|||+...++.
T Consensus       157 ~kl~Dfg~a~~~~~  170 (326)
T 2y0a_A          157 IKIIDFGLAHKIDF  170 (326)
T ss_dssp             EEECCCTTCEECCT
T ss_pred             EEEEECCCCeECCC
Confidence            99999999988764

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=98.44  E-value=1.6e-07  Score=88.85  Aligned_cols=76  Identities=28%  Similarity=0.334  Sum_probs=57.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.++..... ..      .+.       .....++..++.+ +..+|..|++|+|++|.||+++.+|++.++
T Consensus        94 ~e~~~~~~L~~~l~~~~-~~------~~~-------~~~~~i~~qi~~~-l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~  158 (303)
T 1zy4_A           94 MEYCENGTLYDLIHSEN-LN------QQR-------DEYWRLFRQILEA-LSYIHSQGIIHRDLKPMNIFIDESRNVKIG  158 (303)
T ss_dssp             EECCCSCBHHHHHHHSC-GG------GCH-------HHHHHHHHHHHHH-HHHHHHTTCCCSCCCGGGEEECTTSCEEEC
T ss_pred             EecCCCCCHHHhhhccc-cc------cch-------HHHHHHHHHHHHH-HHHHHhCCeecccCCHHhEEEcCCCCEEEe
Confidence            79999999999876321 00      111       1123555555555 888999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...+...
T Consensus       159 dfg~~~~~~~~  169 (303)
T 1zy4_A          159 DFGLAKNVHRS  169 (303)
T ss_dssp             CCCCCSCTTC-
T ss_pred             eCcchhhcccc
Confidence            99999877643

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=98.44  E-value=4.1e-07  Score=86.85  Aligned_cols=74  Identities=20%  Similarity=0.332  Sum_probs=51.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.+......+       .++..       ....++..++.+ +..++..|++|+|++|.||+++.+|++.++
T Consensus        98 ~e~~~~~~L~~~l~~~~~-------~~~~~-------~~~~i~~qi~~~-L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~  162 (289)
T 3og7_A           98 TQWCEGSSLYHHLHASET-------KFEMK-------KLIDIARQTARG-MDYLHAKSIIHRDLKSNNIFLHEDNTVKIG  162 (289)
T ss_dssp             EECCCEEEHHHHHTTC----------CCHH-------HHHHHHHHHHHH-HHHHHHTTCCCSCCCGGGEEEETTTEEEEC
T ss_pred             EEecCCCcHHHHHhhccC-------CCCHH-------HHHHHHHHHHHH-HHHHHhCCcccccCccceEEECCCCCEEEc
Confidence            789999998887643211       11111       123556666555 889999999999999999999999999999


Q ss_pred             ecccccccc
Q 013370           81 DFGLLCRME   89 (444)
Q Consensus        81 DFGmv~~L~   89 (444)
                      |||+....+
T Consensus       163 Dfg~~~~~~  171 (289)
T 3og7_A          163 DFGLATEKS  171 (289)
T ss_dssp             CCC------
T ss_pred             cceeccccc
Confidence            999987554

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=98.44  E-value=2e-07  Score=100.19  Aligned_cols=116  Identities=14%  Similarity=0.100  Sum_probs=74.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+........      .+++.+       ...++..++.+ +..||..|++|+|++|.||+++.+|.+.++
T Consensus       263 mEy~~gg~L~~~l~~~~~~------~l~e~~-------~~~i~~qIl~a-L~yLH~~gIvHrDLKPeNILld~~g~vKL~  328 (576)
T 2acx_A          263 LTLMNGGDLKFHIYHMGQA------GFPEAR-------AVFYAAEICCG-LEDLHRERIVYRDLKPENILLDDHGHIRIS  328 (576)
T ss_dssp             ECCCCSCBHHHHHHSSSSC------CCCHHH-------HHHHHHHHHHH-HHHHHHTTEECCCCCGGGEEECTTSCEEEC
T ss_pred             EEcCCCCcHHHHHHhcCCC------CCCHHH-------HHHHHHHHHHH-HHHHHHCCEeccCCchheEEEeCCCCeEEE
Confidence            8999999999877543210      011221       22445555544 888999999999999999999999999999


Q ss_pred             ecccccccchhhHH-hHHHHHHHHHhCCHH-HHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQF-AMLASIVHIVNGDWQ-SLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~-~l~~ll~alv~~D~~-~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||+...+++.... ..        .+... ...+.+.. +......|.+.+.--+..++.
T Consensus       329 DFGla~~~~~~~~~~~~--------~GT~~Y~APEvl~~-~~~~~~~DiwSLGvilyeLlt  380 (576)
T 2acx_A          329 DLGLAVHVPEGQTIKGR--------VGTVGYMAPEVVKN-ERYTFSPDWWALGCLLYEMIA  380 (576)
T ss_dssp             CCTTCEECCTTCCEECC--------CSCGGGCCHHHHTT-CEESSHHHHHHHHHHHHHHHH
T ss_pred             ecccceecccCcccccc--------CCCccccCHHHHcC-CCCCccchHHHHHHHHHHHHh
Confidence            99999887654221 11        11111 11333332 223445677777766666654

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=98.43  E-value=2.2e-07  Score=93.24  Aligned_cols=115  Identities=16%  Similarity=0.216  Sum_probs=73.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCC----c
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG----Q   76 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DG----r   76 (444)
                      |||++|+.|.++......+        ++..       ...++..++.+ +..||..|++|+|++|.||+++.+|    +
T Consensus        94 ~e~~~gg~L~~~l~~~~~l--------~~~~-------~~~i~~qi~~a-L~~LH~~givHrDlkp~NIll~~~~~~~~~  157 (361)
T 2yab_A           94 LELVSGGELFDFLAQKESL--------SEEE-------ATSFIKQILDG-VNYLHTKKIAHFDLKPENIMLLDKNIPIPH  157 (361)
T ss_dssp             EECCCSCBHHHHHTTCSCC--------BHHH-------HHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEESCTTSSSCC
T ss_pred             EEcCCCCcHHHHHHhcCCC--------CHHH-------HHHHHHHHHHH-HHHHHHCCcccCCCCHHHEEEeCCCCCccC
Confidence            7999999999987533211        2221       23455665555 8889999999999999999999877    7


Q ss_pred             EEEEecccccccchhhHHhHHHHHHHHHhCCHH-HHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           77 IGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQ-SLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        77 LvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~-~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      +.++|||+...+.+.....-       ..+... ...+.+.. +......|++.+.--+..++.
T Consensus       158 vkl~DFG~a~~~~~~~~~~~-------~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~  213 (361)
T 2yab_A          158 IKLIDFGLAHEIEDGVEFKN-------IFGTPEFVAPEIVNY-EPLGLEADMWSIGVITYILLS  213 (361)
T ss_dssp             EEECCCSSCEECCTTCCCCC-------CCSCGGGCCHHHHTT-CCCCTHHHHHHHHHHHHHHHH
T ss_pred             EEEEecCCceEcCCCCcccc-------CCCCccEECchHHcC-CCCCccccHHHHHHHHHHHHh
Confidence            99999999988765321100       001111 11233322 223445677777666666554

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=98.43  E-value=1.6e-07  Score=93.05  Aligned_cols=78  Identities=17%  Similarity=0.225  Sum_probs=57.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEcc-------
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTS-------   73 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~-------   73 (444)
                      |||++|++|.++.......+..   .++..       ....++..++.+ +..||..|++|+|++|.||+++.       
T Consensus       146 ~e~~~~g~L~~~l~~~~~~~~~---~l~~~-------~~~~i~~qi~~~-L~~lH~~~ivHrDiKp~NIll~~~~~~~~~  214 (365)
T 3e7e_A          146 GELYSYGTLLNAINLYKNTPEK---VMPQG-------LVISFAMRMLYM-IEQVHDCEIIHGDIKPDNFILGNGFLEQDD  214 (365)
T ss_dssp             ECCCCSCBHHHHHHHHHTSTTC---SCCHH-------HHHHHHHHHHHH-HHHHHTTTEECCCCSGGGEEECGGGTCC--
T ss_pred             EeccCCCcHHHHHHHhhccccc---CCCHH-------HHHHHHHHHHHH-HHHHhhCCeecCCCCHHHEEecccccCccc
Confidence            8999999999998653111100   01122       123555555555 88899999999999999999998       


Q ss_pred             ----CCcEEEEecccccccc
Q 013370           74 ----SGQIGFLDFGLLCRME   89 (444)
Q Consensus        74 ----DGrLvlLDFGmv~~L~   89 (444)
                          +|.+.++|||+...+.
T Consensus       215 ~~~~~~~~kl~DFG~a~~~~  234 (365)
T 3e7e_A          215 EDDLSAGLALIDLGQSIDMK  234 (365)
T ss_dssp             ----CTTEEECCCTTCEEGG
T ss_pred             cccccCCEEEeeCchhhhhh
Confidence                8999999999997654

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=98.43  E-value=4.7e-07  Score=85.51  Aligned_cols=75  Identities=19%  Similarity=0.350  Sum_probs=57.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCC----c
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG----Q   76 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DG----r   76 (444)
                      |||++|..|.++.......+        ..       ....++..++.+ +..++..|++|+|++|.||+++.+|    +
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~--------~~-------~~~~~~~~i~~~-l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~  150 (283)
T 3bhy_A           87 LELVSGGELFDFLAEKESLT--------ED-------EATQFLKQILDG-VHYLHSKRIAHFDLKPENIMLLDKNVPNPR  150 (283)
T ss_dssp             EECCCSCBHHHHHHHHSSCC--------HH-------HHHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEESCSSSSSCC
T ss_pred             EeecCCCcHHHHHHhcCCCC--------HH-------HHHHHHHHHHHH-HHHHHhCCccCCCCChHHEEEecCCCCCCc
Confidence            79999999999876432222        11       123556666555 7889999999999999999999887    8


Q ss_pred             EEEEecccccccchh
Q 013370           77 IGFLDFGLLCRMERK   91 (444)
Q Consensus        77 LvlLDFGmv~~L~~~   91 (444)
                      +.++|||+...+...
T Consensus       151 ~kl~dfg~~~~~~~~  165 (283)
T 3bhy_A          151 IKLIDFGIAHKIEAG  165 (283)
T ss_dssp             EEECCCTTCEECC--
T ss_pred             eEEEecccceeccCC
Confidence            999999999887654

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=98.43  E-value=1.4e-07  Score=88.72  Aligned_cols=77  Identities=18%  Similarity=0.268  Sum_probs=58.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|++|.++.....+.+      ++..       ....++..++.+ +..++..|++|+|++|.||+++.+|++.++
T Consensus        99 ~e~~~~~~L~~~l~~~~~~~------~~~~-------~~~~i~~qi~~~-l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~  164 (284)
T 2a19_B           99 MEFCDKGTLEQWIEKRRGEK------LDKV-------LALELFEQITKG-VDYIHSKKLINRDLKPSNIFLVDTKQVKIG  164 (284)
T ss_dssp             ECCCCSCBHHHHHHHGGGSC------CCHH-------HHHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEEEETTEEEEC
T ss_pred             EeccCCCCHHHHHhhccCCC------CCHH-------HHHHHHHHHHHH-HHHHHhCCeeeccCCHHHEEEcCCCCEEEC
Confidence            79999999999876432111      1111       123555665555 888999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...+...
T Consensus       165 Dfg~~~~~~~~  175 (284)
T 2a19_B          165 DFGLVTSLKND  175 (284)
T ss_dssp             CCTTCEESSCC
T ss_pred             cchhheecccc
Confidence            99998877653

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=98.43  E-value=1.9e-07  Score=89.14  Aligned_cols=77  Identities=18%  Similarity=0.185  Sum_probs=58.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|++|.++.....+.       .+..       ....++..++.+ +..+|..|++|+|++|.||+++.+|++.++
T Consensus       106 ~e~~~~~~L~~~l~~~~~~-------~~~~-------~~~~i~~ql~~~-l~~lH~~~i~H~dikp~Nil~~~~~~~kl~  170 (298)
T 3f66_A          106 LPYMKHGDLRNFIRNETHN-------PTVK-------DLIGFGLQVAKG-MKYLASKKFVHRDLAARNCMLDEKFTVKVA  170 (298)
T ss_dssp             EECCTTCBHHHHHHCTTCC-------CCHH-------HHHHHHHHHHHH-HHHHHHTTCCCSCCSGGGEEECTTCCEEEC
T ss_pred             EeCCCCCCHHHHHHhcccC-------CCHH-------HHHHHHHHHHHH-HHHHHhCCccCCCCchheEEECCCCCEEEC
Confidence            7999999999987532211       1111       123455555555 889999999999999999999999999999


Q ss_pred             ecccccccchhh
Q 013370           81 DFGLLCRMERKH   92 (444)
Q Consensus        81 DFGmv~~L~~~~   92 (444)
                      |||+...+....
T Consensus       171 Dfg~a~~~~~~~  182 (298)
T 3f66_A          171 DFGLARDMYDKE  182 (298)
T ss_dssp             SCGGGCCCSCGG
T ss_pred             cccccccccccc
Confidence            999998776543

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=98.43  E-value=1.7e-07  Score=87.94  Aligned_cols=75  Identities=16%  Similarity=0.191  Sum_probs=58.3

Q ss_pred             CCCcCCCCcccHHhhcC-CCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLST-GSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~-G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      |||++|..|.++..... +.+        ..       ....++..++.+ +..++..|++|+|++|.||+++.+|++.+
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~--------~~-------~~~~i~~qi~~~-l~~lH~~~i~H~dikp~Nil~~~~~~~~l  145 (268)
T 3sxs_A           82 TEYISNGCLLNYLRSHGKGLE--------PS-------QLLEMCYDVCEG-MAFLESHQFIHRDLAARNCLVDRDLCVKV  145 (268)
T ss_dssp             EECCTTCBHHHHHHHHGGGCC--------HH-------HHHHHHHHHHHH-HHHHHHTTEEESSCSGGGEEECTTCCEEE
T ss_pred             EEccCCCcHHHHHHHcCCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCeecCCcCcceEEECCCCCEEE
Confidence            79999999998876431 111        11       233566666655 88999999999999999999999999999


Q ss_pred             Eecccccccchh
Q 013370           80 LDFGLLCRMERK   91 (444)
Q Consensus        80 LDFGmv~~L~~~   91 (444)
                      +|||+...+...
T Consensus       146 ~Dfg~~~~~~~~  157 (268)
T 3sxs_A          146 SDFGMTRYVLDD  157 (268)
T ss_dssp             CCTTCEEECCTT
T ss_pred             ccCccceecchh
Confidence            999998866543

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=98.42  E-value=5.1e-07  Score=88.17  Aligned_cols=77  Identities=22%  Similarity=0.384  Sum_probs=55.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEcc---CCcE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTS---SGQI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~---DGrL   77 (444)
                      |||++|+.|.++.....+.      .+++.+       ...++..++.+ +..|+..|++|+|++|.||+++.   +|++
T Consensus       108 ~e~~~~~~L~~~~~~~~~~------~~~~~~-------~~~i~~ql~~~-L~~LH~~givH~Dikp~NIl~~~~~~~~~~  173 (327)
T 3lm5_A          108 LEYAAGGEIFSLCLPELAE------MVSEND-------VIRLIKQILEG-VYYLHQNNIVHLDLKPQNILLSSIYPLGDI  173 (327)
T ss_dssp             EECCTTEEGGGGGSSCC-C------CCCHHH-------HHHHHHHHHHH-HHHHHHTTEECSCCCGGGEEESCBTTBCCE
T ss_pred             EEecCCCcHHHHHHHhccc------CCCHHH-------HHHHHHHHHHH-HHHHHHCCeecCcCChHHEEEecCCCCCcE
Confidence            7999999998876432111      112221       23555555555 88899999999999999999997   7999


Q ss_pred             EEEecccccccchh
Q 013370           78 GFLDFGLLCRMERK   91 (444)
Q Consensus        78 vlLDFGmv~~L~~~   91 (444)
                      .++|||+...++..
T Consensus       174 kL~Dfg~a~~~~~~  187 (327)
T 3lm5_A          174 KIVDFGMSRKIGHA  187 (327)
T ss_dssp             EECCGGGCEEC---
T ss_pred             EEeeCccccccCCc
Confidence            99999999887654

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=98.42  E-value=1.3e-07  Score=91.82  Aligned_cols=82  Identities=20%  Similarity=0.182  Sum_probs=57.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCC--------CCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEc
Q 013370            1 MEWMVGESPTDLISLSTGSSV--------DGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYT   72 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~--------~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~   72 (444)
                      |||++|++|.++.........        .....++..       ....++..++.+ +..|+..|++|+|++|.||+++
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~i~~qi~~a-L~~LH~~~ivH~dlkp~NIl~~  176 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ-------QLLHFAADVARG-MDYLSQKQFIHRDLAARNILVG  176 (327)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHH-------HHHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEEC
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccCCHH-------HHHHHHHHHHHH-HHHHHhCCccCCCCccceEEEc
Confidence            799999999998763210000        000001111       234566666655 7889999999999999999999


Q ss_pred             cCCcEEEEecccccccch
Q 013370           73 SSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        73 ~DGrLvlLDFGmv~~L~~   90 (444)
                      .+|.+.++|||+......
T Consensus       177 ~~~~~kL~Dfg~~~~~~~  194 (327)
T 1fvr_A          177 ENYVAKIADFGLSRGQEV  194 (327)
T ss_dssp             GGGCEEECCTTCEESSCE
T ss_pred             CCCeEEEcccCcCccccc
Confidence            999999999999875443

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=98.42  E-value=7.6e-06  Score=84.26  Aligned_cols=74  Identities=22%  Similarity=0.293  Sum_probs=56.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEE---ccCCcE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRY---TSSGQI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv---~~DGrL   77 (444)
                      |||++|+.|.+........        +..+       ...++..++.+ +..+|..|++|+|++|.||++   +.+|.+
T Consensus       105 ~e~~~~~~L~~~~~~~~~~--------~~~~-------~~~i~~qi~~~-l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~  168 (484)
T 3nyv_A          105 GEVYTGGELFDEIISRKRF--------SEVD-------AARIIRQVLSG-ITYMHKNKIVHRDLKPENLLLESKSKDANI  168 (484)
T ss_dssp             ECCCCSCBHHHHHHTCSCC--------BHHH-------HHHHHHHHHHH-HHHHHHTTCCCSCCCGGGEEESSSSTTCCE
T ss_pred             EecCCCCCHHHHHHhcCCC--------CHHH-------HHHHHHHHHHH-HHHHHHCCeeeCCCCHHHEEEecCCCCCcE
Confidence            7999999998877543222        1221       23556666555 888999999999999999999   567899


Q ss_pred             EEEecccccccch
Q 013370           78 GFLDFGLLCRMER   90 (444)
Q Consensus        78 vlLDFGmv~~L~~   90 (444)
                      .++|||+...++.
T Consensus       169 kl~Dfg~a~~~~~  181 (484)
T 3nyv_A          169 RIIDFGLSTHFEA  181 (484)
T ss_dssp             EECCTTHHHHBCC
T ss_pred             EEEeeeeeEEccc
Confidence            9999999876654

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=98.42  E-value=1.6e-07  Score=88.18  Aligned_cols=74  Identities=24%  Similarity=0.328  Sum_probs=56.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.+|.+......+.        +..       ....++..++.+ +..++..|++|+|++|.||+++.+|++.++
T Consensus        84 ~e~~~~~~L~~~l~~~~~~--------~~~-------~~~~~~~~i~~~-l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~  147 (276)
T 2yex_A           84 LEYCSGGELFDRIEPDIGM--------PEP-------DAQRFFHQLMAG-VVYLHGIGITHRDIKPENLLLDERDNLKIS  147 (276)
T ss_dssp             EECCTTEEGGGGSBTTTBC--------CHH-------HHHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEECTTCCEEEC
T ss_pred             EEecCCCcHHHHHhhccCC--------CHH-------HHHHHHHHHHHH-HHHHHhCCeeccCCChHHEEEccCCCEEEe
Confidence            7999999998876432111        111       123555555555 888999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+..
T Consensus       148 dfg~~~~~~~  157 (276)
T 2yex_A          148 DFGLATVFRY  157 (276)
T ss_dssp             CCTTCEECEE
T ss_pred             eCCCccccCC
Confidence            9999987654

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=98.41  E-value=1.4e-07  Score=90.23  Aligned_cols=73  Identities=21%  Similarity=0.250  Sum_probs=55.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..+.++... ..        ++..+       ...++..++.+ +..+|..|++|+|++|.||+++.+|++.++
T Consensus       117 ~e~~~~~~l~~~~~~-~~--------~~~~~-------~~~~~~qi~~~-l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~  179 (298)
T 2zv2_A          117 FELVNQGPVMEVPTL-KP--------LSEDQ-------ARFYFQDLIKG-IEYLHYQKIIHRDIKPSNLLVGEDGHIKIA  179 (298)
T ss_dssp             EECCTTCBSCCSSCS-SC--------CCHHH-------HHHHHHHHHHH-HHHHHHTTEECCCCCGGGEEECTTSCEEEC
T ss_pred             EecCCCCcHHHHhhc-CC--------CCHHH-------HHHHHHHHHHH-HHHHHHCCeeccCCCHHHEEECCCCCEEEe
Confidence            799999998876431 11        11221       23455555555 888999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+..
T Consensus       180 Dfg~~~~~~~  189 (298)
T 2zv2_A          180 DFGVSNEFKG  189 (298)
T ss_dssp             CCTTCEECSS
T ss_pred             cCCCcccccc
Confidence            9999987754

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=98.41  E-value=1.5e-07  Score=89.32  Aligned_cols=76  Identities=22%  Similarity=0.148  Sum_probs=50.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.++.....+ +      ++..       ....++..++.+ +..+|..|++|+|++|.||+++.+|++.++
T Consensus        94 ~e~~~~~~L~~~l~~~~~-~------~~~~-------~~~~~~~qi~~~-l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~  158 (281)
T 1mp8_A           94 MELCTLGELRSFLQVRKY-S------LDLA-------SLILYAYQLSTA-LAYLESKRFVHRDIAARNVLVSSNDCVKLG  158 (281)
T ss_dssp             EECCTTEEHHHHHHHTTT-T------SCHH-------HHHHHHHHHHHH-HHHHHHTTCCCSCCSGGGEEEEETTEEEEC
T ss_pred             EecCCCCCHHHHHHhcCC-C------CCHH-------HHHHHHHHHHHH-HHHHHhCCeecccccHHHEEECCCCCEEEC
Confidence            799999999998764321 1      1111       123455555555 888999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...++..
T Consensus       159 Dfg~~~~~~~~  169 (281)
T 1mp8_A          159 DFGLSRYMEDS  169 (281)
T ss_dssp             C----------
T ss_pred             ccccccccCcc
Confidence            99999877553

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=98.41  E-value=1.9e-06  Score=81.91  Aligned_cols=71  Identities=23%  Similarity=0.207  Sum_probs=54.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHH--------HcCccccCCCCCCeEEc
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLL--------ETGILHADPHPGNLRYT   72 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl--------~~GfFHADPHPGNILv~   72 (444)
                      |||++|+.|.++.... .        ++...       ...++..++.+ +..+|        ..|++|+|++|.||+++
T Consensus        85 ~e~~~~g~L~~~l~~~-~--------~~~~~-------~~~i~~~i~~~-l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~  147 (301)
T 3q4u_A           85 THYHEMGSLYDYLQLT-T--------LDTVS-------CLRIVLSIASG-LAHLHIEIFGTQGKPAIAHRDLKSKNILVK  147 (301)
T ss_dssp             ECCCTTCBHHHHHTTC-C--------BCHHH-------HHHHHHHHHHH-HHHHHSCBCSTTCBCEEECSCCCGGGEEEC
T ss_pred             hhhccCCCHHHHHhhc-c--------cCHHH-------HHHHHHHHHHH-HHHHHHhhhhccCCCCeecCCCChHhEEEc
Confidence            7999999999987421 1        11221       23455555555 88899        89999999999999999


Q ss_pred             cCCcEEEEeccccccc
Q 013370           73 SSGQIGFLDFGLLCRM   88 (444)
Q Consensus        73 ~DGrLvlLDFGmv~~L   88 (444)
                      .+|++.++|||+...+
T Consensus       148 ~~~~~kl~Dfg~a~~~  163 (301)
T 3q4u_A          148 KNGQCCIADLGLAVMH  163 (301)
T ss_dssp             TTSCEEECCCTTCEEE
T ss_pred             CCCCEEEeeCCCeeec
Confidence            9999999999987543

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=98.40  E-value=2e-07  Score=88.64  Aligned_cols=81  Identities=22%  Similarity=0.368  Sum_probs=57.7

Q ss_pred             CCCcCCCCcccHHhhc--CCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEE
Q 013370            1 MEWMVGESPTDLISLS--TGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~--~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLv   78 (444)
                      |||++|..|.++....  .+....  ..++..       ....++..++.+ +..+|..|++|+|++|.||+++.+|++.
T Consensus        92 ~e~~~~~~L~~~l~~~~~~~~~~~--~~~~~~-------~~~~i~~qi~~~-l~~lH~~~i~H~dl~p~Nil~~~~~~~k  161 (303)
T 2vwi_A           92 MKLLSGGSVLDIIKHIVAKGEHKS--GVLDES-------TIATILREVLEG-LEYLHKNGQIHRDVKAGNILLGEDGSVQ  161 (303)
T ss_dssp             EECCTTCBHHHHHHHHHHTTTTTT--CSSCHH-------HHHHHHHHHHHH-HHHHHHTTCCCCCCSGGGEEECTTCCEE
T ss_pred             ehhccCCchHHHHHHHhhcccccc--CCCCHH-------HHHHHHHHHHHH-HHHHHhCCCCCCCCChhhEEEcCCCCEE
Confidence            7999999999987642  110000  001111       233566666665 7889999999999999999999999999


Q ss_pred             EEecccccccchh
Q 013370           79 FLDFGLLCRMERK   91 (444)
Q Consensus        79 lLDFGmv~~L~~~   91 (444)
                      ++|||+...+...
T Consensus       162 l~dfg~~~~~~~~  174 (303)
T 2vwi_A          162 IADFGVSAFLATG  174 (303)
T ss_dssp             ECCCHHHHHCC--
T ss_pred             EEeccchheeccC
Confidence            9999998776543

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=98.40  E-value=8e-07  Score=84.74  Aligned_cols=117  Identities=15%  Similarity=0.166  Sum_probs=69.6

Q ss_pred             CCCcCCCCcccHHhhcC-CCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLST-GSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~-G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      |||++| .+.++..... +.+        ..       ....++..++.+ +..+|..|++|+|++|.||+++.+|++.+
T Consensus        79 ~e~~~~-~l~~~~~~~~~~~~--------~~-------~~~~~~~qi~~~-l~~lH~~~i~H~dlkp~Nil~~~~~~~kl  141 (288)
T 1ob3_A           79 FEHLDQ-DLKKLLDVCEGGLE--------SV-------TAKSFLLQLLNG-IAYCHDRRVLHRDLKPQNLLINREGELKI  141 (288)
T ss_dssp             EECCSE-EHHHHHHTSTTCCC--------HH-------HHHHHHHHHHHH-HHHHHHTTCCCSCCCGGGEEECTTSCEEE
T ss_pred             EEecCC-CHHHHHHhcccCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCeecCCCCHHHEEEcCCCCEEE
Confidence            688887 6666554321 111        11       123455555555 88899999999999999999999999999


Q ss_pred             EecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           80 LDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        80 LDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      +|||+...+....... ..   ......| ...+.+..-...++..|++.+.--+..++.
T Consensus       142 ~Dfg~~~~~~~~~~~~-~~---~~~t~~y-~aPE~~~~~~~~~~~~DiwslG~il~~l~~  196 (288)
T 1ob3_A          142 ADFGLARAFGIPVRKY-TH---EIVTLWY-RAPDVLMGSKKYSTTIDIWSVGCIFAEMVN  196 (288)
T ss_dssp             CCTTHHHHHCC-------------CCCTT-CCHHHHTTCCSCCTHHHHHHHHHHHHHHHH
T ss_pred             eECccccccCcccccc-cc---ccccccc-cCchheeCCCCCCcHHHHHHHHHHHHHHHh
Confidence            9999987765432211 00   0111112 123444332334455677777665655554

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=98.40  E-value=3.5e-06  Score=82.18  Aligned_cols=86  Identities=13%  Similarity=0.182  Sum_probs=57.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCC---CCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcE
Q 013370            1 MEWMVGESPTDLISLSTGSSVD---GSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~---~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrL   77 (444)
                      |||++|++|.++..........   .+... ....... .....++..++.+ +..++..|++|+|++|.||+++.+|++
T Consensus       120 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~i~~qi~~a-L~~LH~~~ivH~Dlkp~NIll~~~~~~  196 (334)
T 2pvf_A          120 VEYASKGNLREYLRARRPPGMEYSYDINRV-PEEQMTF-KDLVSCTYQLARG-MEYLASQKCIHRDLAARNVLVTENNVM  196 (334)
T ss_dssp             EECCTTCBHHHHHHTTSCTTCCSCC---------CCCH-HHHHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEECTTCCE
T ss_pred             EECCCCCcHHHHHHHhcccccccccccccc-ccccCCH-HHHHHHHHHHHHH-HHHHHhCCeeCCCCccceEEEcCCCCE
Confidence            7999999999988643210000   00000 0011111 1233555555555 788999999999999999999999999


Q ss_pred             EEEecccccccc
Q 013370           78 GFLDFGLLCRME   89 (444)
Q Consensus        78 vlLDFGmv~~L~   89 (444)
                      .++|||+...+.
T Consensus       197 kL~Dfg~~~~~~  208 (334)
T 2pvf_A          197 KIADFGLARDIN  208 (334)
T ss_dssp             EECCCTTCEECT
T ss_pred             EEcccccccccc
Confidence            999999986554

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=98.40  E-value=4.7e-07  Score=90.50  Aligned_cols=75  Identities=19%  Similarity=0.274  Sum_probs=55.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCC---cE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG---QI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DG---rL   77 (444)
                      |||++|+.|.+.......        +++..       ...++..++.+ +..+|..|++|+|++|.||+++.++   .+
T Consensus       107 ~e~~~gg~L~~~l~~~~~--------~~~~~-------~~~~~~qi~~a-l~~lH~~~ivH~Dlkp~NIll~~~~~~~~~  170 (362)
T 2bdw_A          107 FDLVTGGELFEDIVAREF--------YSEAD-------ASHCIQQILES-IAYCHSNGIVHRNLKPENLLLASKAKGAAV  170 (362)
T ss_dssp             ECCCCSCBHHHHHTTCSC--------CCHHH-------HHHHHHHHHHH-HHHHHHTTCBCCCCSGGGEEESCSSTTCCE
T ss_pred             EecCCCCCHHHHHHHcCC--------CCHHH-------HHHHHHHHHHH-HHHHHHCCeEeccCchHHEEEecCCCCCCE
Confidence            799999999877653221        11221       23455555555 8889999999999999999998654   59


Q ss_pred             EEEecccccccchh
Q 013370           78 GFLDFGLLCRMERK   91 (444)
Q Consensus        78 vlLDFGmv~~L~~~   91 (444)
                      .++|||+...+.+.
T Consensus       171 kl~DfG~a~~~~~~  184 (362)
T 2bdw_A          171 KLADFGLAIEVNDS  184 (362)
T ss_dssp             EECCCTTCBCCTTC
T ss_pred             EEeecCcceEecCC
Confidence            99999999877643

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=98.40  E-value=1.6e-07  Score=93.77  Aligned_cols=80  Identities=18%  Similarity=0.177  Sum_probs=54.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++ +.|.++.......+.+       ...+. ......++..++.+ +..|+..|++|+|+||+||+++.+|++.++
T Consensus       179 ~E~~~-g~L~~~l~~~~~~~~~-------~~~l~-~~~~~~i~~qi~~a-L~~LH~~~ivHrDikp~NIll~~~~~~kL~  248 (377)
T 3byv_A          179 YPRMQ-SNLQTFGEVLLSHSST-------HKSLV-HHARLQLTLQVIRL-LASLHHYGLVHTYLRPVDIVLDQRGGVFLT  248 (377)
T ss_dssp             EECCS-EEHHHHHHHHHHTTTT-------THHHH-HHHHHHHHHHHHHH-HHHHHHTTEECSCCCGGGEEECTTCCEEEC
T ss_pred             EeccC-CCHHHHHHhccccccc-------ccccc-HHHHHHHHHHHHHH-HHHHHhCCeecCCCCHHHEEEcCCCCEEEE
Confidence            78885 4787776543211100       01111 11223455666555 788999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+....+.
T Consensus       249 DFG~a~~~~~  258 (377)
T 3byv_A          249 GFEHLVRDGA  258 (377)
T ss_dssp             CGGGCEETTC
T ss_pred             echhheecCC
Confidence            9999886543

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=98.39  E-value=2e-07  Score=90.80  Aligned_cols=76  Identities=18%  Similarity=0.218  Sum_probs=58.3

Q ss_pred             CCCcCCCCcccHHhhcC-CCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLST-GSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~-G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      |||++|++|.+...... ..+        ...       ...++..++.+ +..+|..|++|+|++|.||+++.+|++.+
T Consensus        93 ~e~~~~~~L~~~l~~~~~~~~--------~~~-------~~~~~~qi~~~-l~~lH~~~ivH~Dikp~Nil~~~~~~~kl  156 (325)
T 3kex_A           93 TQYLPLGSLLDHVRQHRGALG--------PQL-------LLNWGVQIAKG-MYYLEEHGMVHRNLAARNVLLKSPSQVQV  156 (325)
T ss_dssp             EECCTTCBSHHHHHSSGGGSC--------TTH-------HHHHHHHHHHH-HHHHHHTTCCCSCCSSTTEEESSSSCEEE
T ss_pred             EEeCCCCCHHHHHHHccccCC--------HHH-------HHHHHHHHHHH-HHHHHhCCCCCCccchheEEECCCCeEEE
Confidence            78999999988875421 111        111       23455555554 88999999999999999999999999999


Q ss_pred             Eecccccccchhh
Q 013370           80 LDFGLLCRMERKH   92 (444)
Q Consensus        80 LDFGmv~~L~~~~   92 (444)
                      +|||+...++...
T Consensus       157 ~Dfg~a~~~~~~~  169 (325)
T 3kex_A          157 ADFGVADLLPPDD  169 (325)
T ss_dssp             CSCSGGGGSCCCT
T ss_pred             CCCCcccccCccc
Confidence            9999998876543

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=98.39  E-value=2.4e-06  Score=85.47  Aligned_cols=73  Identities=19%  Similarity=0.216  Sum_probs=54.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+......+       .++..       ....++..++.+ +..|+..|++|+|++|.||+++.+|.+.+.
T Consensus       191 ~e~~~~g~L~~~l~~~~~-------~~~~~-------~~~~~~~qi~~~-l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~  255 (377)
T 3cbl_A          191 MELVQGGDFLTFLRTEGA-------RLRVK-------TLLQMVGDAAAG-MEYLESKCCIHRDLAARNCLVTEKNVLKIS  255 (377)
T ss_dssp             EECCTTCBHHHHHHHHGG-------GCCHH-------HHHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEECTTCCEEEC
T ss_pred             EEcCCCCCHHHHHHhcCC-------CCCHH-------HHHHHHHHHHHH-HHHHHHCCcCCcccCHHHEEEcCCCcEEEC
Confidence            799999999888754211       01111       123455555544 888999999999999999999999999999


Q ss_pred             eccccccc
Q 013370           81 DFGLLCRM   88 (444)
Q Consensus        81 DFGmv~~L   88 (444)
                      |||+....
T Consensus       256 DfG~s~~~  263 (377)
T 3cbl_A          256 DFGMSREE  263 (377)
T ss_dssp             CGGGCEEC
T ss_pred             cCCCceec
Confidence            99987643

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=98.39  E-value=1.1e-06  Score=88.39  Aligned_cols=75  Identities=25%  Similarity=0.322  Sum_probs=54.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEE--ccCCcEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRY--TSSGQIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv--~~DGrLv   78 (444)
                      |||++|+.|.+......+       .+++..       ...++..++.+ +..|+..|++|+|+||+||++  +.+|++.
T Consensus       165 ~E~~~~~~L~~~l~~~~~-------~l~~~~-------~~~i~~qi~~a-L~~LH~~~ivH~Dlkp~NIll~~~~~~~~k  229 (373)
T 2x4f_A          165 MEYVDGGELFDRIIDESY-------NLTELD-------TILFMKQICEG-IRHMHQMYILHLDLKPENILCVNRDAKQIK  229 (373)
T ss_dssp             EECCTTCEEHHHHHHTGG-------GCCHHH-------HHHHHHHHHHH-HHHHHHTTEECCCCCGGGEEEEETTTTEEE
T ss_pred             EeCCCCCcHHHHHHhcCC-------CCCHHH-------HHHHHHHHHHH-HHHHHHCCcccccCCHHHEEEecCCCCcEE
Confidence            799999999887653211       011111       23455555544 888999999999999999999  4568999


Q ss_pred             EEecccccccch
Q 013370           79 FLDFGLLCRMER   90 (444)
Q Consensus        79 lLDFGmv~~L~~   90 (444)
                      ++|||+...+.+
T Consensus       230 l~DFG~a~~~~~  241 (373)
T 2x4f_A          230 IIDFGLARRYKP  241 (373)
T ss_dssp             ECCCSSCEECCT
T ss_pred             EEeCCCceecCC
Confidence            999999987654

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=98.38  E-value=1.6e-07  Score=92.29  Aligned_cols=49  Identities=24%  Similarity=0.350  Sum_probs=42.4

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccc
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME   89 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~   89 (444)
                      ..++..++.+ +..|+..|++|+|++|.||+++.+|++.++|||+...++
T Consensus       127 ~~i~~qi~~~-l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~  175 (351)
T 3mi9_A          127 KRVMQMLLNG-LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFS  175 (351)
T ss_dssp             HHHHHHHHHH-HHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             HHHHHHHHHH-HHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhccccc
Confidence            3556666555 888999999999999999999999999999999987765

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=98.38  E-value=2.5e-07  Score=91.11  Aligned_cols=74  Identities=27%  Similarity=0.367  Sum_probs=56.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHH-cCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLE-TGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~-~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      |||++|..|.++.......+        ..       ....++..++.+ +..|+. +|++|+|+||.||+++.+|++.+
T Consensus       110 ~e~~~~~~L~~~l~~~~~~~--------~~-------~~~~i~~~i~~~-l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl  173 (360)
T 3eqc_A          110 MEHMDGGSLDQVLKKAGRIP--------EQ-------ILGKVSIAVIKG-LTYLREKHKIMHRDVKPSNILVNSRGEIKL  173 (360)
T ss_dssp             ECCCTTCBHHHHHHHHSSCC--------HH-------HHHHHHHHHHHH-HHHHHHHHCCCCSCCSGGGEEECTTCCEEE
T ss_pred             EECCCCCCHHHHHHHcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHhCCEEcCCccHHHEEECCCCCEEE
Confidence            79999999999876532222        11       123455555544 777887 49999999999999999999999


Q ss_pred             Eecccccccch
Q 013370           80 LDFGLLCRMER   90 (444)
Q Consensus        80 LDFGmv~~L~~   90 (444)
                      +|||+...+..
T Consensus       174 ~Dfg~~~~~~~  184 (360)
T 3eqc_A          174 CDFGVSGQLID  184 (360)
T ss_dssp             CCCCCCHHHHH
T ss_pred             EECCCCccccc
Confidence            99999876544

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=98.38  E-value=5.6e-07  Score=85.36  Aligned_cols=75  Identities=21%  Similarity=0.359  Sum_probs=56.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEc---cCCcE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYT---SSGQI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~---~DGrL   77 (444)
                      |||+ |.+|.++.....+       .++..       ....++..++.+ +..+|..|++|+|++|.||+++   .+|.+
T Consensus        84 ~e~~-~~~L~~~~~~~~~-------~~~~~-------~~~~i~~qi~~~-l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~  147 (296)
T 3uzp_A           84 MELL-GPSLEDLFNFCSR-------KFSLK-------TVLLLADQMISR-IEYIHSKNFIHRDVKPDNFLMGLGKKGNLV  147 (296)
T ss_dssp             EECC-CCBHHHHHHHTTT-------CCCHH-------HHHHHHHHHHHH-HHHHHHTTEECSCCCGGGEEECCGGGTTCE
T ss_pred             EEec-CCCHHHHHHhhcc-------CCCHH-------HHHHHHHHHHHH-HHHHHhCCeeeCCCCHHHeEEecCCCCCeE
Confidence            7899 8889888764321       01122       123556666555 7889999999999999999995   78999


Q ss_pred             EEEecccccccchh
Q 013370           78 GFLDFGLLCRMERK   91 (444)
Q Consensus        78 vlLDFGmv~~L~~~   91 (444)
                      .++|||+...+...
T Consensus       148 kl~Dfg~~~~~~~~  161 (296)
T 3uzp_A          148 YIIDFGLAKKYRDA  161 (296)
T ss_dssp             EECCCTTCEECBCT
T ss_pred             EEeeCCCccccccc
Confidence            99999999877654

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=98.37  E-value=1.8e-06  Score=82.95  Aligned_cols=73  Identities=26%  Similarity=0.249  Sum_probs=54.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCc---E
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQ---I   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGr---L   77 (444)
                      |||++|+.|.+........+        ..       ....++..++.+ +..||..|++|+|++|.||+++.+|.   +
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~--------~~-------~~~~i~~qi~~~-l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~  153 (316)
T 2ac3_A           90 FEKMRGGSILSHIHKRRHFN--------EL-------EASVVVQDVASA-LDFLHNKGIAHRDLKPENILCEHPNQVSPV  153 (316)
T ss_dssp             EECCTTCBHHHHHHHHSSCC--------HH-------HHHHHHHHHHHH-HHHHHHTTCCCCCCCGGGEEESCSSSSCSE
T ss_pred             EEcCCCCcHHHHHhccCCCC--------HH-------HHHHHHHHHHHH-HHHHHhCCceeCCCCHHHEEEccCCCcCce
Confidence            79999999998876443222        11       123455555555 88899999999999999999998876   9


Q ss_pred             EEEecccccccc
Q 013370           78 GFLDFGLLCRME   89 (444)
Q Consensus        78 vlLDFGmv~~L~   89 (444)
                      .+.|||+...+.
T Consensus       154 kl~Dfg~~~~~~  165 (316)
T 2ac3_A          154 KICDFDLGSGIK  165 (316)
T ss_dssp             EECCTTCCC---
T ss_pred             EEEEccCccccc
Confidence            999999976553

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=98.36  E-value=2.5e-07  Score=90.42  Aligned_cols=50  Identities=18%  Similarity=0.217  Sum_probs=42.9

Q ss_pred             HHHHHHHHHHHHHHHH-HcCccccCCCCCCeEEccCC--------------------cEEEEecccccccch
Q 013370           40 LDLVNKGVEATLVQLL-ETGILHADPHPGNLRYTSSG--------------------QIGFLDFGLLCRMER   90 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl-~~GfFHADPHPGNILv~~DG--------------------rLvlLDFGmv~~L~~   90 (444)
                      ..++..++.+ +..+| ..|++|+|+||.||+++.+|                    ++.++|||+...++.
T Consensus       164 ~~i~~qi~~a-L~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~  234 (336)
T 2vuw_A          164 KSILHQLTAS-LAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD  234 (336)
T ss_dssp             HHHHHHHHHH-HHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET
T ss_pred             HHHHHHHHHH-HHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC
Confidence            3566666655 78899 89999999999999999988                    999999999988764

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=98.36  E-value=2.4e-07  Score=90.41  Aligned_cols=74  Identities=19%  Similarity=0.274  Sum_probs=54.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..+.++.....+.+        ..       ....++..++.+ +..|+..|++|+|++|.||+++.+|.+.++
T Consensus       103 ~e~~~~~~l~~~~~~~~~~~--------~~-------~~~~~~~qi~~~-l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~  166 (331)
T 4aaa_A          103 FEFVDHTILDDLELFPNGLD--------YQ-------VVQKYLFQIING-IGFCHSHNIIHRDIKPENILVSQSGVVKLC  166 (331)
T ss_dssp             EECCSEEHHHHHHHSTTCCC--------HH-------HHHHHHHHHHHH-HHHHHHTTCCCCCCCGGGEEECTTSCEEEC
T ss_pred             EecCCcchHHHHHhhccCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCEEccCcChheEEEcCCCcEEEE
Confidence            79999998888765433322        11       123455555555 888999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+..
T Consensus       167 Dfg~~~~~~~  176 (331)
T 4aaa_A          167 DFGFARTLAA  176 (331)
T ss_dssp             CCTTC-----
T ss_pred             eCCCceeecC
Confidence            9999977654

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=98.36  E-value=5.4e-07  Score=92.66  Aligned_cols=77  Identities=25%  Similarity=0.313  Sum_probs=58.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|++|.++.....+.            .... ..+..++..++.+ +..|+..|++|+|++|.||+++.+|.+.++
T Consensus       261 ~e~~~~g~L~~~l~~~~~~------------~~~~-~~~~~~~~qi~~~-l~~LH~~~ivHrDlkp~Nill~~~~~~kl~  326 (454)
T 1qcf_A          261 TEFMAKGSLLDFLKSDEGS------------KQPL-PKLIDFSAQIAEG-MAFIEQRNYIHRDLRAANILVSASLVCKIA  326 (454)
T ss_dssp             ECCCTTCBHHHHHHSHHHH------------TCCH-HHHHHHHHHHHHH-HHHHHHTTCCCSSCSGGGEEECTTCCEEEC
T ss_pred             EeecCCCcHHHHHHhccCC------------CCCH-HHHHHHHHHHHHH-HHHHHhCCccCCCCCHHHEEECCCCcEEEe
Confidence            7999999999987632110            0111 1223455555555 788999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...+...
T Consensus       327 DFG~a~~~~~~  337 (454)
T 1qcf_A          327 DFGLARVIEDN  337 (454)
T ss_dssp             STTGGGGBCCH
T ss_pred             eCCCceEcCCC
Confidence            99999887654

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=98.36  E-value=3.1e-07  Score=89.23  Aligned_cols=89  Identities=17%  Similarity=0.144  Sum_probs=58.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCc--h--------hhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSST--H--------LDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLR   70 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~--~--------~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNIL   70 (444)
                      |||++|++|.++..............  .        ........ .....++..++++ +..||..|++|+|++|.||+
T Consensus       129 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~i~~qi~~~-l~~LH~~~ivH~Dlkp~NIl  206 (343)
T 1luf_A          129 FEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSC-AEQLCIARQVAAG-MAYLSERKFVHRDLATRNCL  206 (343)
T ss_dssp             EECCTTCBHHHHHHHTCC----------------------CCCCH-HHHHHHHHHHHHH-HHHHHHTTCCCSCCSGGGEE
T ss_pred             EecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCH-HHHHHHHHHHHHH-HHHHHhCCeecCCCCcceEE
Confidence            79999999999876531100000000  0        00001111 1223456666555 88899999999999999999


Q ss_pred             EccCCcEEEEecccccccchh
Q 013370           71 YTSSGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        71 v~~DGrLvlLDFGmv~~L~~~   91 (444)
                      ++.+|++.++|||+...+...
T Consensus       207 ~~~~~~~kl~Dfg~~~~~~~~  227 (343)
T 1luf_A          207 VGENMVVKIADFGLSRNIYSA  227 (343)
T ss_dssp             ECGGGCEEECCCSCHHHHTGG
T ss_pred             ECCCCeEEEeecCCCcccccC
Confidence            999999999999998776543

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=98.36  E-value=3e-07  Score=88.82  Aligned_cols=80  Identities=15%  Similarity=0.143  Sum_probs=53.7

Q ss_pred             CCCcCCCCcccHHhhcC-CCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLST-GSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~-G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      |||++|+.|.++..... +...   ..++..       ....++..++.+ +..++..|++|+|++|.||+++.+|++.+
T Consensus       110 ~e~~~~~~L~~~l~~~~~~~~~---~~~~~~-------~~~~i~~qi~~a-l~~LH~~~ivH~Dikp~NIli~~~~~~kl  178 (323)
T 3qup_A          110 LPFMKHGDLHAFLLASRIGENP---FNLPLQ-------TLVRFMVDIACG-MEYLSSRNFIHRDLAARNCMLAEDMTVCV  178 (323)
T ss_dssp             EECCTTCBHHHHHHHHHC---C---CCCCHH-------HHHHHHHHHHHH-HHHHHHTTCCCSCCSGGGEEECTTSCEEE
T ss_pred             EEeccCCcHHHHHHhhhccccc---cccCHH-------HHHHHHHHHHHH-HHHHHcCCcccCCCCcceEEEcCCCCEEE
Confidence            78999999998876431 1100   011111       123556666555 88999999999999999999999999999


Q ss_pred             Eecccccccchh
Q 013370           80 LDFGLLCRMERK   91 (444)
Q Consensus        80 LDFGmv~~L~~~   91 (444)
                      +|||+...+...
T Consensus       179 ~Dfg~a~~~~~~  190 (323)
T 3qup_A          179 ADFGLSRKIYSG  190 (323)
T ss_dssp             CCCCC-------
T ss_pred             eecccccccccc
Confidence            999999877554

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=98.36  E-value=6.4e-07  Score=87.25  Aligned_cols=74  Identities=22%  Similarity=0.304  Sum_probs=56.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCc----
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQ----   76 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGr----   76 (444)
                      |||+ |..|.++.....+       .++..       ....++..++.+ +..||..|++|+|++|.||+++.+|.    
T Consensus        84 ~e~~-~~~L~~~~~~~~~-------~~~~~-------~~~~i~~qi~~~-l~~LH~~~iiHrDlkp~Nill~~~~~~~~~  147 (330)
T 2izr_A           84 LELL-GPSLEDLFDLCDR-------TFSLK-------TVLMIAIQLISR-MEYVHSKNLIYRDVKPENFLIGRPGNKTQQ  147 (330)
T ss_dssp             EECC-CCBHHHHHHHTTT-------CCCHH-------HHHHHHHHHHHH-HHHHHHTTEECCCCCGGGEEECCGGGTCTT
T ss_pred             EEeC-CCCHHHHHHHcCC-------CCCHH-------HHHHHHHHHHHH-HHHHHhCCeeccCCCHHHeeeccCCCCCCc
Confidence            7999 8899998765311       01122       123556666555 88999999999999999999999887    


Q ss_pred             -EEEEecccccccch
Q 013370           77 -IGFLDFGLLCRMER   90 (444)
Q Consensus        77 -LvlLDFGmv~~L~~   90 (444)
                       +.++|||+...+..
T Consensus       148 ~~kl~DFg~a~~~~~  162 (330)
T 2izr_A          148 VIHIIDFALAKEYID  162 (330)
T ss_dssp             SEEECCCTTCEESBC
T ss_pred             eEEEEEcccceeeec
Confidence             99999999987654

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=98.35  E-value=5.2e-07  Score=87.85  Aligned_cols=50  Identities=28%  Similarity=0.475  Sum_probs=42.3

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCC--cEEEEecccccccch
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG--QIGFLDFGLLCRMER   90 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DG--rLvlLDFGmv~~L~~   90 (444)
                      ..++..++.+ +..|+..|++|+|++|.||+++.+|  ++.++|||+...+..
T Consensus       171 ~~i~~qi~~~-l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~  222 (345)
T 3hko_A          171 SNIMRQIFSA-LHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYK  222 (345)
T ss_dssp             HHHHHHHHHH-HHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGG
T ss_pred             HHHHHHHHHH-HHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccc
Confidence            4556555555 8889999999999999999999887  899999999987654

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=98.35  E-value=9.3e-07  Score=86.94  Aligned_cols=93  Identities=17%  Similarity=0.233  Sum_probs=56.1

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcC
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMD  119 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG  119 (444)
                      ..++..++.+ +..||..|++|+|++|.||+++.+|++.++|||+............      ..........+.+...+
T Consensus       137 ~~~~~qi~~~-l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~------~~~t~~y~aPE~~~~~~  209 (362)
T 3pg1_A          137 QYFMYHILLG-LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTH------YVTHRWYRAPELVMQFK  209 (362)
T ss_dssp             HHHHHHHHHH-HHHHHHTTCCCCCCCGGGEEECTTCCEEECCTTC---------------------CGGGCCHHHHTTCT
T ss_pred             HHHHHHHHHH-HHHHHHCcCEecCCChHHEEEcCCCCEEEEecCcccccccccccce------ecccceecCcHHhcCCC
Confidence            3455555555 8889999999999999999999999999999999976554322211      00011112244444434


Q ss_pred             CCCCCCChHHHHHHHHHHHh
Q 013370          120 VVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus       120 ~l~~~~d~~~~~~~L~~~l~  139 (444)
                      ..++..|+..+..-+..++.
T Consensus       210 ~~~~~~DiwslG~il~~l~~  229 (362)
T 3pg1_A          210 GFTKLVDMWSAGCVMAEMFN  229 (362)
T ss_dssp             TCCTHHHHHHHHHHHHHHHH
T ss_pred             CCCcHhHHHhHHHHHHHHHh
Confidence            45555678877666666554

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=98.35  E-value=7.3e-07  Score=83.63  Aligned_cols=75  Identities=20%  Similarity=0.250  Sum_probs=51.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcC---ccccCCCCCCeEEcc----
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETG---ILHADPHPGNLRYTS----   73 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~G---fFHADPHPGNILv~~----   73 (444)
                      |||++|..+.++..- ...        +.++       ...++..++.+ +..+|..|   ++|+|++|.||+++.    
T Consensus        85 ~e~~~~~~L~~~~~~-~~~--------~~~~-------~~~i~~~l~~~-l~~lH~~~~~~i~H~dikp~Nil~~~~~~~  147 (271)
T 3dtc_A           85 MEFARGGPLNRVLSG-KRI--------PPDI-------LVNWAVQIARG-MNYLHDEAIVPIIHRDLKSSNILILQKVEN  147 (271)
T ss_dssp             EECCTTEEHHHHHTS-SCC--------CHHH-------HHHHHHHHHHH-HHHHHHSSSSCCCCSCCSGGGEEESSCCSS
T ss_pred             EEcCCCCCHHHHhhc-CCC--------CHHH-------HHHHHHHHHHH-HHHHHhCCCCceeecCCchHHEEEeccccc
Confidence            799999999887642 111        1221       23556666555 88899999   899999999999986    


Q ss_pred             ----CCcEEEEecccccccchhh
Q 013370           74 ----SGQIGFLDFGLLCRMERKH   92 (444)
Q Consensus        74 ----DGrLvlLDFGmv~~L~~~~   92 (444)
                          +|.+.++|||+...+....
T Consensus       148 ~~~~~~~~kl~Dfg~~~~~~~~~  170 (271)
T 3dtc_A          148 GDLSNKILKITDFGLAREWHRTT  170 (271)
T ss_dssp             SCCSSCCEEECCCCC--------
T ss_pred             ccccCcceEEccCCccccccccc
Confidence                7889999999998766543

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=98.34  E-value=3.9e-07  Score=88.83  Aligned_cols=89  Identities=18%  Similarity=0.115  Sum_probs=58.8

Q ss_pred             CCCcCCCCcccHHhhcCC-CCCCCCC--------chhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEE
Q 013370            1 MEWMVGESPTDLISLSTG-SSVDGSS--------THLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRY   71 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G-~~~~~i~--------~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv   71 (444)
                      |||++|++|.++.....+ .+...+.        .......... .....++..++.+ +..||..|++|+|++|.||++
T Consensus       128 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~i~~qi~~a-L~~LH~~~ivH~Dikp~NIll  205 (344)
T 1rjb_A          128 FEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTF-EDLLCFAYQVAKG-MEFLEFKSCVHRDLAARNVLV  205 (344)
T ss_dssp             EECCTTCBHHHHHHTTTTCC---------------------CCH-HHHHHHHHHHHHH-HHHHHHTTEEETTCSGGGEEE
T ss_pred             EecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCH-HHHHHHHHHHHHH-HHHHHhCCcccCCCChhhEEE
Confidence            799999999998865321 1100000        0000000111 1234556666655 888999999999999999999


Q ss_pred             ccCCcEEEEecccccccchh
Q 013370           72 TSSGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        72 ~~DGrLvlLDFGmv~~L~~~   91 (444)
                      +.+|.+.++|||+...+...
T Consensus       206 ~~~~~~kL~Dfg~~~~~~~~  225 (344)
T 1rjb_A          206 THGKVVKICDFGLARDIMSD  225 (344)
T ss_dssp             ETTTEEEECCCGGGSCGGGC
T ss_pred             cCCCcEEeCCCccCcccccC
Confidence            99999999999999876543

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=98.34  E-value=4.1e-07  Score=88.51  Aligned_cols=76  Identities=18%  Similarity=0.207  Sum_probs=58.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.+|.++.....+ .      ++..       ....++..++.+ +..|+..|++|+|++|.||+++.+|++.++
T Consensus       123 ~e~~~~~~L~~~l~~~~~-~------~~~~-------~~~~i~~qi~~a-L~~LH~~~ivH~dikp~NIli~~~~~~kL~  187 (326)
T 2w1i_A          123 MEYLPYGSLRDYLQKHKE-R------IDHI-------KLLQYTSQICKG-MEYLGTKRYIHRDLATRNILVENENRVKIG  187 (326)
T ss_dssp             ECCCTTCBHHHHHHHSTT-S------SCHH-------HHHHHHHHHHHH-HHHHHHTTEECSCCCGGGEEEEETTEEEEC
T ss_pred             EECCCCCCHHHHHHhccc-C------CCHH-------HHHHHHHHHHHH-HHHHHhCCEeccCCCcceEEEcCCCcEEEe
Confidence            799999999998764321 0      1111       123455555555 788999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...++..
T Consensus       188 Dfg~~~~~~~~  198 (326)
T 2w1i_A          188 DFGLTKVLPQD  198 (326)
T ss_dssp             CCTTCEECCSS
T ss_pred             cCcchhhcccc
Confidence            99999877543

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=98.34  E-value=4.4e-07  Score=84.81  Aligned_cols=76  Identities=21%  Similarity=0.230  Sum_probs=58.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.++.....+.       ++.+       ....++..++.+ +..+|..|++|+|++|.||+++.+|++.++
T Consensus        82 ~e~~~~~~L~~~~~~~~~~-------~~~~-------~~~~~~~~i~~~-l~~lH~~~i~H~dl~p~Nili~~~~~~kl~  146 (267)
T 3t9t_A           82 TEFMEHGCLSDYLRTQRGL-------FAAE-------TLLGMCLDVCEG-MAYLEEACVIHRDLAARNCLVGENQVIKVS  146 (267)
T ss_dssp             ECCCTTCBHHHHHHHTTTC-------CCHH-------HHHHHHHHHHHH-HHHHHHTTCCCSSCCGGGEEECGGGCEEEC
T ss_pred             EeCCCCCcHHHHHhhCccc-------CCHH-------HHHHHHHHHHHH-HHHHHhCCcccCCCchheEEECCCCCEEEc
Confidence            7999999999987643211       1111       123455555554 888999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+.......
T Consensus       147 dfg~~~~~~~~  157 (267)
T 3t9t_A          147 DFGMTRFVLDD  157 (267)
T ss_dssp             CTTGGGGBCCH
T ss_pred             ccccccccccc
Confidence            99998877553

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=98.34  E-value=2.9e-07  Score=87.02  Aligned_cols=76  Identities=22%  Similarity=0.198  Sum_probs=52.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.+|.+.......            ...+. .....++..++.+ +..+|..|++|+|++|.||+++.+|++.++
T Consensus        94 ~e~~~~~~L~~~l~~~~~------------~~~~~-~~~~~~~~~i~~~-l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~  159 (278)
T 1byg_A           94 TEYMAKGSLVDYLRSRGR------------SVLGG-DCLLKFSLDVCEA-MEYLEGNNFVHRDLAARNVLVSEDNVAKVS  159 (278)
T ss_dssp             ECCCTTEEHHHHHHHHHH------------HHCCH-HHHHHHHHHHHHH-HHHHHHTTCCCSCCSGGGEEECTTSCEEEC
T ss_pred             EecCCCCCHHHHHHhccc------------ccCCH-HHHHHHHHHHHHH-HHHHHhCCccccCCCcceEEEeCCCcEEEe
Confidence            799999998887653210            00111 1233555555555 888999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+....+.
T Consensus       160 Dfg~~~~~~~  169 (278)
T 1byg_A          160 DFGLTKEASS  169 (278)
T ss_dssp             CCCC------
T ss_pred             eccccccccc
Confidence            9999876654

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=98.34  E-value=3.3e-06  Score=84.24  Aligned_cols=79  Identities=20%  Similarity=0.202  Sum_probs=55.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCC---cE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG---QI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DG---rL   77 (444)
                      |||++|+.|.++.......+ .....++..       ....++..++.+ +..|+..|++|+|++|.||+++.+|   .+
T Consensus       153 ~e~~~~g~L~~~l~~~~~~~-~~~~~~~~~-------~~~~i~~qi~~a-L~~LH~~~ivHrDlkp~NIll~~~~~~~~~  223 (367)
T 3l9p_A          153 LELMAGGDLKSFLRETRPRP-SQPSSLAML-------DLLHVARDIACG-CQYLEENHFIHRDIAARNCLLTCPGPGRVA  223 (367)
T ss_dssp             EECCTTEEHHHHHHHHSCCS-SSCCCCCHH-------HHHHHHHHHHHH-HHHHHHTTCCCSCCCGGGEEESCSSTTCCE
T ss_pred             EEeCCCCCHHHHHHhhcccc-CccccccHH-------HHHHHHHHHHHH-HHHHHhCCeeCCCCChhhEEEecCCCCceE
Confidence            79999999999887542111 000111111       123455555554 8899999999999999999999666   49


Q ss_pred             EEEeccccccc
Q 013370           78 GFLDFGLLCRM   88 (444)
Q Consensus        78 vlLDFGmv~~L   88 (444)
                      .++|||+...+
T Consensus       224 kL~DFG~a~~~  234 (367)
T 3l9p_A          224 KIGDFGMARDI  234 (367)
T ss_dssp             EECCCHHHHHH
T ss_pred             EECCCcccccc
Confidence            99999998654

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=98.33  E-value=2.7e-07  Score=89.13  Aligned_cols=76  Identities=24%  Similarity=0.406  Sum_probs=55.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.++.....+.+      +++.       ....++..++.+ +..+|..|++|+|++|.||+++.+|++.++
T Consensus       106 ~e~~~~~~L~~~l~~~~~~~------~~~~-------~~~~i~~qi~~~-l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~  171 (326)
T 2x7f_A          106 MEFCGAGSVTDLIKNTKGNT------LKEE-------WIAYICREILRG-LSHLHQHKVIHRDIKGQNVLLTENAEVKLV  171 (326)
T ss_dssp             EECCTTEEHHHHHHHSGGGC------CCHH-------HHHHHHHHHHHH-HHHHHHTTCCCCCCSGGGEEECTTCCEEEC
T ss_pred             EEcCCCCcHHHHHHhcccCC------CCHH-------HHHHHHHHHHHH-HHHHHHCCccccCCcHHHEEEcCCCCEEEe
Confidence            79999999999876432111      1111       123455555554 888999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...++.
T Consensus       172 Dfg~~~~~~~  181 (326)
T 2x7f_A          172 DFGVSAQLDR  181 (326)
T ss_dssp             CCTTTC----
T ss_pred             eCcCceecCc
Confidence            9999887754

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=98.33  E-value=4.1e-07  Score=88.33  Aligned_cols=75  Identities=20%  Similarity=0.346  Sum_probs=58.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCC----c
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG----Q   76 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DG----r   76 (444)
                      |||++|.+|.++......        ++...       ...++..++.+ +..+|..|++|+|++|.||+++.+|    +
T Consensus        94 ~e~~~~~~L~~~l~~~~~--------~~~~~-------~~~i~~qi~~a-L~~lH~~~ivH~dikp~NIl~~~~~~~~~~  157 (321)
T 2a2a_A           94 LELVSGGELFDFLAQKES--------LSEEE-------ATSFIKQILDG-VNYLHTKKIAHFDLKPENIMLLDKNIPIPH  157 (321)
T ss_dssp             ECCCCSCBHHHHHHTCSC--------EEHHH-------HHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEESCTTSSSCC
T ss_pred             EEcCCCCcHHHHHHhcCC--------CCHHH-------HHHHHHHHHHH-HHHHHhCCeecCCCChHHEEEecCCCCcCC
Confidence            799999999998764221        12221       23555655555 8889999999999999999999988    8


Q ss_pred             EEEEecccccccchh
Q 013370           77 IGFLDFGLLCRMERK   91 (444)
Q Consensus        77 LvlLDFGmv~~L~~~   91 (444)
                      +.++|||+...+...
T Consensus       158 ~kl~Dfg~~~~~~~~  172 (321)
T 2a2a_A          158 IKLIDFGLAHEIEDG  172 (321)
T ss_dssp             EEECCCTTCEECCTT
T ss_pred             EEEccCccceecCcc
Confidence            999999999877653

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=98.33  E-value=1.3e-06  Score=82.70  Aligned_cols=75  Identities=21%  Similarity=0.365  Sum_probs=56.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEE---ccCCcE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRY---TSSGQI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv---~~DGrL   77 (444)
                      |||+ |..|.++.....+       .++..+       ...++..++.+ +..+|..|++|+|++|.||++   +.+|.+
T Consensus        84 ~e~~-~~~L~~~~~~~~~-------~~~~~~-------~~~i~~qi~~~-l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~  147 (296)
T 4hgt_A           84 MELL-GPSLEDLFNFCSR-------KFSLKT-------VLLLADQMISR-IEYIHSKNFIHRDVKPDNFLMGLGKKGNLV  147 (296)
T ss_dssp             EECC-CCBHHHHHHHTTS-------CCCHHH-------HHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEECCGGGTTCE
T ss_pred             EEcc-CCCHHHHHHHhcC-------CCCHHH-------HHHHHHHHHHH-HHHHHHCCeecCCCCHHHeeeeccCCCCeE
Confidence            7899 8889888764321       011221       23555555555 889999999999999999999   788999


Q ss_pred             EEEecccccccchh
Q 013370           78 GFLDFGLLCRMERK   91 (444)
Q Consensus        78 vlLDFGmv~~L~~~   91 (444)
                      .++|||+...+...
T Consensus       148 kL~Dfg~a~~~~~~  161 (296)
T 4hgt_A          148 YIIDFGLAKKYRDA  161 (296)
T ss_dssp             EECCCTTCEECBCT
T ss_pred             EEecCccceeccCc
Confidence            99999999877653

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=98.32  E-value=1.2e-06  Score=83.59  Aligned_cols=77  Identities=22%  Similarity=0.353  Sum_probs=54.0

Q ss_pred             CCCcCCCCcccHHhhc--CCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEE---ccCC
Q 013370            1 MEWMVGESPTDLISLS--TGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRY---TSSG   75 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~--~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv---~~DG   75 (444)
                      |||++|++|.+.....  .+.+      ++..       ....++..++.+ +..|+..|++|+|++|.||++   +.+|
T Consensus        99 ~e~~~~~~L~~~l~~~~~~~~~------~~~~-------~~~~i~~qi~~~-L~~LH~~~ivH~dikp~NIl~~~~~~~~  164 (285)
T 3is5_A           99 METCEGGELLERIVSAQARGKA------LSEG-------YVAELMKQMMNA-LAYFHSQHVVHKDLKPENILFQDTSPHS  164 (285)
T ss_dssp             ECCCSCCBHHHHHHHHHHHTCC------CCHH-------HHHHHHHHHHHH-HHHHHHTTCCCCCCSGGGEEESSSSTTC
T ss_pred             EEeCCCCcHHHHHHhhhhcccC------CCHH-------HHHHHHHHHHHH-HHHHHhCCEEECCCCHHHEEEecCCCCC
Confidence            7999999998876432  1111      1111       233566666555 888999999999999999999   4568


Q ss_pred             cEEEEecccccccchh
Q 013370           76 QIGFLDFGLLCRMERK   91 (444)
Q Consensus        76 rLvlLDFGmv~~L~~~   91 (444)
                      ++.++|||+...+...
T Consensus       165 ~~kl~Dfg~a~~~~~~  180 (285)
T 3is5_A          165 PIKIIDFGLAELFKSD  180 (285)
T ss_dssp             CEEECCCCCCCC----
T ss_pred             CEEEEeeecceecCCc
Confidence            9999999999876543

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=98.32  E-value=7.5e-07  Score=85.58  Aligned_cols=76  Identities=26%  Similarity=0.320  Sum_probs=58.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEcc---CCcE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTS---SGQI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~---DGrL   77 (444)
                      |||++|+.|.++.....+..      ++..+       ...++..++.+ +..+|..|++|+|++|.||+++.   +|.+
T Consensus        94 ~e~~~~~~L~~~l~~~~~~~------~~~~~-------~~~i~~qi~~~-l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~  159 (299)
T 3m2w_A           94 MECLDGGELFSRIQDRGDQA------FTERE-------ASEIMKSIGEA-IQYLHSINIAHRDVKPENLLYTSKRPNAIL  159 (299)
T ss_dssp             ECCCCSCBHHHHHHHCTTCC------CBHHH-------HHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEESSSSTTCCE
T ss_pred             EeecCCCcHHHHHHhccCCC------CCHHH-------HHHHHHHHHHH-HHHHHhCCcccCCCCHHHEEEecCCCCCcE
Confidence            79999999999887542211      11221       23455555555 88899999999999999999998   7899


Q ss_pred             EEEecccccccch
Q 013370           78 GFLDFGLLCRMER   90 (444)
Q Consensus        78 vlLDFGmv~~L~~   90 (444)
                      .++|||+...+..
T Consensus       160 kl~Dfg~a~~~~~  172 (299)
T 3m2w_A          160 KLTDFGFAKETTG  172 (299)
T ss_dssp             EECCCTTCEECTT
T ss_pred             EEecccccccccc
Confidence            9999999987765

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=98.32  E-value=5.5e-07  Score=86.78  Aligned_cols=83  Identities=12%  Similarity=0.101  Sum_probs=57.9

Q ss_pred             CCCcCCCCcccHHhhcCCC--CCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEE
Q 013370            1 MEWMVGESPTDLISLSTGS--SVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~--~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLv   78 (444)
                      |||++|++|.++.......  ........+.       .....++..++.+ +..+|..|++|+|++|.||+++.+|++.
T Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~-------~~~~~i~~qi~~~-l~~lH~~~i~H~dikp~NIli~~~~~~k  178 (322)
T 1p4o_A          107 MELMTRGDLKSYLRSLRPAMANNPVLAPPSL-------SKMIQMAGEIADG-MAYLNANKFVHRDLAARNCMVAEDFTVK  178 (322)
T ss_dssp             EECCTTCBHHHHHHHHHHHHHHCTTCCCCCH-------HHHHHHHHHHHHH-HHHHHHTTCBCSCCSGGGEEECTTCCEE
T ss_pred             EEeCCCCcHHHHHHHhchhhccCCCCCCcCH-------HHHHHHHHHHHHH-HHHHHHCCCccCCCccceEEEcCCCeEE
Confidence            7999999999887542100  0000000011       1233555566555 8889999999999999999999999999


Q ss_pred             EEecccccccchh
Q 013370           79 FLDFGLLCRMERK   91 (444)
Q Consensus        79 lLDFGmv~~L~~~   91 (444)
                      ++|||+...+...
T Consensus       179 l~Dfg~~~~~~~~  191 (322)
T 1p4o_A          179 IGDFGMTRDIYET  191 (322)
T ss_dssp             ECCTTCCCGGGGG
T ss_pred             ECcCccccccccc
Confidence            9999998876543

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=98.32  E-value=3.8e-06  Score=80.48  Aligned_cols=73  Identities=27%  Similarity=0.340  Sum_probs=55.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEE---ccCCcE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRY---TSSGQI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv---~~DGrL   77 (444)
                      |||++|.+|.+........+        +.       ....++..++.+ +..++..|++|+|++|.||++   +.+|++
T Consensus        85 ~e~~~~~~L~~~l~~~~~~~--------~~-------~~~~~~~qi~~~-l~~lH~~~i~H~dikp~NIl~~~~~~~~~~  148 (304)
T 2jam_A           85 MQLVSGGELFDRILERGVYT--------EK-------DASLVIQQVLSA-VKYLHENGIVHRDLKPENLLYLTPEENSKI  148 (304)
T ss_dssp             ECCCCSCBHHHHHHHHSCCC--------HH-------HHHHHHHHHHHH-HHHHHHTTCCCCSCCGGGCEESSSSTTCCE
T ss_pred             EEcCCCccHHHHHHHcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCccccCCCHHHEEEecCCCCCCE
Confidence            79999999988765432221        11       123455555555 888999999999999999999   678999


Q ss_pred             EEEecccccccc
Q 013370           78 GFLDFGLLCRME   89 (444)
Q Consensus        78 vlLDFGmv~~L~   89 (444)
                      .++|||+.....
T Consensus       149 kl~Dfg~~~~~~  160 (304)
T 2jam_A          149 MITDFGLSKMEQ  160 (304)
T ss_dssp             EBCSCSTTCCCC
T ss_pred             EEccCCcceecC
Confidence            999999876544

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=98.32  E-value=2e-07  Score=94.22  Aligned_cols=132  Identities=11%  Similarity=0.062  Sum_probs=75.5

Q ss_pred             CCCcCCCCcccHHhhcCCC-CCCCCC-chhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEE
Q 013370            1 MEWMVGESPTDLISLSTGS-SVDGSS-THLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~-~~~~i~-~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLv   78 (444)
                      |||++|+.|.+++.-..+. .+.... +......+.. .....++..++.. +..++..|++|+|++|.|||++.+|.+.
T Consensus       148 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~qia~g-l~yLH~~~iiHRDLK~~NILl~~~~~vK  225 (353)
T 4ase_A          148 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL-EHLICYSFQVAKG-MEFLASRKCIHRDLAARNILLSEKNVVK  225 (353)
T ss_dssp             EECCTTEEHHHHHHHTGGGBCCC-------CTTCBCH-HHHHHHHHHHHHH-HHHHHHTTCCCSCCSGGGEEECGGGCEE
T ss_pred             EEcCCCCCHHHHHHhcccccccccccchhhccccCCH-HHHHHHHHHHHHH-HHhHhhCCeecCccCccceeeCCCCCEE
Confidence            8999999999998643210 000000 0000001111 1123444444444 7889999999999999999999999999


Q ss_pred             EEecccccccchhhHHhHHHHHHHHHhCCH-HHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           79 FLDFGLLCRMERKHQFAMLASIVHIVNGDW-QSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        79 lLDFGmv~~L~~~~R~~l~~ll~alv~~D~-~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      +.|||+...+..+.......    -..+-. --..|.+.. +..+...|++.|.--+.+++.
T Consensus       226 i~DFGlar~~~~~~~~~~~~----~~~gt~~ymAPE~l~~-~~y~~ksDVwS~Gv~l~El~t  282 (353)
T 4ase_A          226 ICDFGLARDIYKDPDYVRKG----DARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFS  282 (353)
T ss_dssp             ECCCGGGSCTTTCTTSEEET----TEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHTT
T ss_pred             ECcchhhhhcccCCCceeec----cccccccccCHHHHhc-CCCCCcccEeehHHHHHHHHh
Confidence            99999998775432110000    000011 012344443 334455678877766666653

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=98.32  E-value=1.2e-06  Score=83.47  Aligned_cols=72  Identities=25%  Similarity=0.383  Sum_probs=54.9

Q ss_pred             CCCcCCCCcccHHhhcC-CCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLST-GSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~-G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      |||++|..+.++..... +.+        ..       ....++..++.+ +..++..|++|+|++|.||+++.+|++.+
T Consensus        95 ~e~~~~~~l~~~~~~~~~~~~--------~~-------~~~~~~~~i~~~-l~~lH~~~i~H~dlkp~Nil~~~~~~~kl  158 (302)
T 2j7t_A           95 IEFCPGGAVDAIMLELDRGLT--------EP-------QIQVVCRQMLEA-LNFLHSKRIIHRDLKAGNVLMTLEGDIRL  158 (302)
T ss_dssp             EECCTTEEHHHHHHHHTSCCC--------HH-------HHHHHHHHHHHH-HHHHHHTTCCCCCCSGGGEEECTTSCEEE
T ss_pred             EEeCCCCcHHHHHHhhccCCC--------HH-------HHHHHHHHHHHH-HHHHhcCCcccCCCCHHHEEECCCCCEEE
Confidence            79999999988765422 222        11       123455555555 78899999999999999999999999999


Q ss_pred             Eeccccccc
Q 013370           80 LDFGLLCRM   88 (444)
Q Consensus        80 LDFGmv~~L   88 (444)
                      +|||+....
T Consensus       159 ~Dfg~~~~~  167 (302)
T 2j7t_A          159 ADFGVSAKN  167 (302)
T ss_dssp             CCCHHHHHH
T ss_pred             EECCCCccc
Confidence            999986543

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=98.32  E-value=4.5e-07  Score=87.07  Aligned_cols=76  Identities=21%  Similarity=0.358  Sum_probs=58.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.++.....+.       ++..       ....++..++.+ +..+|..|++|+|++|.||+++.+|++.++
T Consensus       103 ~e~~~~~~L~~~~~~~~~~-------~~~~-------~~~~i~~~i~~~-l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~  167 (314)
T 3com_A          103 MEYCGAGSVSDIIRLRNKT-------LTED-------EIATILQSTLKG-LEYLHFMRKIHRDIKAGNILLNTEGHAKLA  167 (314)
T ss_dssp             EECCTTEEHHHHHHHHTCC-------CCHH-------HHHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEECTTCCEEEC
T ss_pred             eecCCCCCHHHHHHhcCCC-------CCHH-------HHHHHHHHHHHH-HHHHHhCCCcCCCcCHHHEEECCCCCEEEe
Confidence            7999999999987643210       1111       123455555555 788999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...+...
T Consensus       168 dfg~~~~~~~~  178 (314)
T 3com_A          168 DFGVAGQLTDT  178 (314)
T ss_dssp             CCTTCEECBTT
T ss_pred             ecccchhhhhh
Confidence            99999877653

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=98.31  E-value=6.5e-07  Score=86.75  Aligned_cols=77  Identities=17%  Similarity=0.108  Sum_probs=56.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+...... .+.   ..++..+       ...++..++.+ +..+|..|++|+|++|.||+++.+|++.++
T Consensus       114 ~e~~~~~~L~~~l~~~~-~~~---~~~~~~~-------~~~i~~~i~~~-l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~  181 (321)
T 2qkw_B          114 YKYMENGNLKRHLYGSD-LPT---MSMSWEQ-------RLEICIGAARG-LHYLHTRAIIHRDVKSINILLDENFVPKIT  181 (321)
T ss_dssp             EECCTTCBTGGGSSSSC-CCS---CCCCHHH-------HHHHHHHHHHH-HHHHHHTTEECSCCCSTTEEECTTCCEEEC
T ss_pred             EEcCCCCcHHHHHhccC-CCc---cccCHHH-------HHHHHHHHHHH-HHHhcCCCeecCCCCHHHEEECCCCCEEEe
Confidence            79999999998764321 110   0112222       23455555554 888999999999999999999999999999


Q ss_pred             ecccccccc
Q 013370           81 DFGLLCRME   89 (444)
Q Consensus        81 DFGmv~~L~   89 (444)
                      |||+.....
T Consensus       182 Dfg~~~~~~  190 (321)
T 2qkw_B          182 DFGISKKGT  190 (321)
T ss_dssp             CCTTCEECS
T ss_pred             ecccccccc
Confidence            999987654

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=98.31  E-value=3.4e-06  Score=83.70  Aligned_cols=73  Identities=23%  Similarity=0.308  Sum_probs=53.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccC----Cc
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS----GQ   76 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~D----Gr   76 (444)
                      |||++|+.|.+........        ++..       ...++..++.+ +..+|..|++|+|++|.||++..+    +.
T Consensus        95 ~E~~~gg~L~~~i~~~~~~--------~~~~-------~~~~~~qi~~a-l~~lH~~givHrDlkp~NIl~~~~~~~~~~  158 (342)
T 2qr7_A           95 TELMKGGELLDKILRQKFF--------SERE-------ASAVLFTITKT-VEYLHAQGVVHRDLKPSNILYVDESGNPES  158 (342)
T ss_dssp             ECCCCSCBHHHHHHTCTTC--------CHHH-------HHHHHHHHHHH-HHHHHHTTEECSCCCGGGEEESSSSCSGGG
T ss_pred             EeCCCCCcHHHHHHHcCCC--------CHHH-------HHHHHHHHHHH-HHHHHHCCcEeccCCHHHEEEecCCCCcCe
Confidence            8999999998877533211        1211       23455555555 788999999999999999998643    35


Q ss_pred             EEEEecccccccc
Q 013370           77 IGFLDFGLLCRME   89 (444)
Q Consensus        77 LvlLDFGmv~~L~   89 (444)
                      +.++|||+...+.
T Consensus       159 ~kl~Dfg~a~~~~  171 (342)
T 2qr7_A          159 IRICDFGFAKQLR  171 (342)
T ss_dssp             EEECCCTTCEECB
T ss_pred             EEEEECCCcccCc
Confidence            9999999987654

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=98.31  E-value=2.8e-07  Score=88.26  Aligned_cols=88  Identities=13%  Similarity=0.083  Sum_probs=57.9

Q ss_pred             CCCcCCCCcccHHhhcCCCC-CCCCCchh-hHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEE
Q 013370            1 MEWMVGESPTDLISLSTGSS-VDGSSTHL-DRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~-~~~i~~~~-~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLv   78 (444)
                      |||++|+.|.++........ ........ ....... .....++..++.+ +..+|..|++|+|++|.||+++.+|++.
T Consensus       111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~qi~~a-l~~lH~~~i~H~dikp~Nil~~~~~~~k  188 (316)
T 2xir_A          111 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL-EHLICYSFQVAKG-MEFLASRKCIHRDLAARNILLSEKNVVK  188 (316)
T ss_dssp             EECCTTEEHHHHHHTCTTSEECC-------CTTCEEH-HHHHHHHHHHHHH-HHHHHHTTCCCSCCSGGGEEECGGGCEE
T ss_pred             EEcCCCCcHHHHHHhcccccccccccchhhhccccCH-HHHHHHHHHHHHH-HHHHHhCCcccccCccceEEECCCCCEE
Confidence            79999999999876432100 00000000 0000111 1233555555555 7889999999999999999999999999


Q ss_pred             EEecccccccch
Q 013370           79 FLDFGLLCRMER   90 (444)
Q Consensus        79 lLDFGmv~~L~~   90 (444)
                      ++|||+...+..
T Consensus       189 l~Dfg~~~~~~~  200 (316)
T 2xir_A          189 ICDFGLARDIYK  200 (316)
T ss_dssp             ECCCGGGSCTTT
T ss_pred             ECCCcccccccc
Confidence            999999987644

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=98.31  E-value=3.5e-07  Score=86.55  Aligned_cols=76  Identities=21%  Similarity=0.190  Sum_probs=57.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.+......+       .++..       ....++..++.+ +..+|..|++|+|++|.||+++.+|++.++
T Consensus        99 ~e~~~~~~L~~~l~~~~~-------~~~~~-------~~~~~~~~i~~~-l~~lH~~~i~H~dikp~Nili~~~~~~kl~  163 (291)
T 1u46_A           99 TELAPLGSLLDRLRKHQG-------HFLLG-------TLSRYAVQVAEG-MGYLESKRFIHRDLAARNLLLATRDLVKIG  163 (291)
T ss_dssp             EECCTTCBHHHHHHHHGG-------GSCHH-------HHHHHHHHHHHH-HHHHHHTTEECSCCCGGGEEEEETTEEEEC
T ss_pred             EecccCCCHHHHHHhccC-------CcCHH-------HHHHHHHHHHHH-HHHHHhCCcccCCCchheEEEcCCCCEEEc
Confidence            689999999887754311       01111       233556666655 888999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...++..
T Consensus       164 Dfg~~~~~~~~  174 (291)
T 1u46_A          164 DFGLMRALPQN  174 (291)
T ss_dssp             CCTTCEECCC-
T ss_pred             ccccccccccc
Confidence            99999887653

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=98.31  E-value=2e-06  Score=83.87  Aligned_cols=112  Identities=16%  Similarity=0.100  Sum_probs=64.4

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCC
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDV  120 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~  120 (444)
                      .++..++.+ +..|+..|++|+|++|.||+++.+|++.++|||+....+...... ...   .....| ...+.+..-..
T Consensus       104 ~~~~qi~~a-L~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~-~~~---~~t~~y-~aPE~~~~~~~  177 (324)
T 3mtl_A          104 LFLFQLLRG-LAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY-DNE---VVTLWY-RPPDILLGSTD  177 (324)
T ss_dssp             HHHHHHHHH-HHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC----------------CGGG-CCHHHHTTCCC
T ss_pred             HHHHHHHHH-HHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCcccc-ccc---cCcccc-cChhhhcCCCC
Confidence            455555554 888999999999999999999999999999999987665432211 000   001111 12344433233


Q ss_pred             CCCCCChHHHHHHHHHHHhchhccCCCCcccHHHHHHHHHH
Q 013370          121 VRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWS  161 (444)
Q Consensus       121 l~~~~d~~~~~~~L~~~l~~~~~~~~l~~~~f~~ll~~l~~  161 (444)
                      ..+..|++.+.--+..++...   .+....+..+.+..+..
T Consensus       178 ~~~~~DiwslG~il~~l~~g~---~pf~~~~~~~~~~~i~~  215 (324)
T 3mtl_A          178 YSTQIDMWGVGCIFYEMATGR---PLFPGSTVEEQLHFIFR  215 (324)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSS---CSCCCSSHHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHhCC---CCCCCCCHHHHHHHHHH
Confidence            344567777766666655431   23333444444444433

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=98.31  E-value=9.1e-07  Score=88.43  Aligned_cols=48  Identities=25%  Similarity=0.394  Sum_probs=41.4

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccc
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME   89 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~   89 (444)
                      .++..++.+ ++.||..|++|+|++|.||+++.+|.+.++|||+...+.
T Consensus       113 ~i~~qi~~~-L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  160 (388)
T 3oz6_A          113 YVVYQLIKV-IKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFV  160 (388)
T ss_dssp             HHHHHHHHH-HHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESS
T ss_pred             HHHHHHHHH-HHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCccccccc
Confidence            445555554 889999999999999999999999999999999998764

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=98.31  E-value=5.7e-07  Score=89.98  Aligned_cols=87  Identities=13%  Similarity=0.181  Sum_probs=58.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCC---CCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcE
Q 013370            1 MEWMVGESPTDLISLSTGSSVD---GSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~---~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrL   77 (444)
                      |||++|+.|.++..........   ++... ++..... ..+..++..++.+ +..|+..|++|+|++|.||+++.+|.+
T Consensus       166 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~i~~qi~~a-L~~LH~~~ivHrDlkp~NIll~~~~~~  242 (370)
T 2psq_A          166 VEYASKGNLREYLRARRPPGMEYSYDINRV-PEEQMTF-KDLVSCTYQLARG-MEYLASQKCIHRDLAARNVLVTENNVM  242 (370)
T ss_dssp             EECCTTCBHHHHHHHTCCC------------CCCCCCH-HHHHHHHHHHHHH-HHHHHHTTEECSCCCGGGEEECTTCCE
T ss_pred             EEcCCCCCHHHHHHhhCCcccccccccccc-ccccCCH-HHHHHHHHHHHHH-HHHHHhCCeeccccchhhEEECCCCCE
Confidence            7999999999988653210000   00000 0001111 1123455555554 888999999999999999999999999


Q ss_pred             EEEecccccccch
Q 013370           78 GFLDFGLLCRMER   90 (444)
Q Consensus        78 vlLDFGmv~~L~~   90 (444)
                      .++|||+...+..
T Consensus       243 kl~DFG~a~~~~~  255 (370)
T 2psq_A          243 KIADFGLARDINN  255 (370)
T ss_dssp             EECCCSSCEETTC
T ss_pred             EEccccCCcccCc
Confidence            9999999987654

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=98.30  E-value=3.6e-07  Score=93.34  Aligned_cols=51  Identities=22%  Similarity=0.336  Sum_probs=41.9

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhh
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKH   92 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~   92 (444)
                      .++..++.+ ++.||..|++|+|++|+||+++.+|++.++|||+...+....
T Consensus       133 ~i~~qil~a-L~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~  183 (432)
T 3n9x_A          133 TILYNLLLG-ENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEK  183 (432)
T ss_dssp             HHHHHHHHH-HHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC----
T ss_pred             HHHHHHHHH-HHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCcccccccc
Confidence            455555555 889999999999999999999999999999999999886643

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=98.30  E-value=4.7e-07  Score=86.55  Aligned_cols=89  Identities=19%  Similarity=0.202  Sum_probs=59.0

Q ss_pred             CCCcCCCCcccHHhhcCCCC-CCCCC-c--hhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCc
Q 013370            1 MEWMVGESPTDLISLSTGSS-VDGSS-T--HLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQ   76 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~-~~~i~-~--~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGr   76 (444)
                      |||++|++|.++.....+.. ..... .  ......... .....++..++.+ +..+|..|++|+|++|.||+++.+|.
T Consensus       106 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~qi~~~-l~~lH~~~i~H~dlkp~Nil~~~~~~  183 (313)
T 1t46_A          106 TEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL-EDLLSFSYQVAKG-MAFLASKNCIHRDLAARNILLTHGRI  183 (313)
T ss_dssp             EECCTTEEHHHHHHHTTTTC--------------CCCCH-HHHHHHHHHHHHH-HHHHHHTTCCCSCCSGGGEEEETTTE
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccccCCH-HHHHHHHHHHHHH-HHHHHHCCeecCCCccceEEEcCCCC
Confidence            79999999999876532100 00000 0  000000111 1234556666555 88899999999999999999999999


Q ss_pred             EEEEecccccccchh
Q 013370           77 IGFLDFGLLCRMERK   91 (444)
Q Consensus        77 LvlLDFGmv~~L~~~   91 (444)
                      +.++|||+...+...
T Consensus       184 ~kl~Dfg~~~~~~~~  198 (313)
T 1t46_A          184 TKICDFGLARDIKND  198 (313)
T ss_dssp             EEECCCGGGSCTTSC
T ss_pred             EEEcccccccccccc
Confidence            999999999877654

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=98.29  E-value=5.5e-07  Score=86.20  Aligned_cols=77  Identities=19%  Similarity=0.172  Sum_probs=56.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+......+..     ..+..       ....++..++.+ +..+|..|++|+|++|.||+++.+|++.++
T Consensus       109 ~e~~~~~~L~~~l~~~~~~~-----~~~~~-------~~~~i~~~i~~~-l~~lH~~~i~H~dlkp~Nili~~~~~~kl~  175 (307)
T 2nru_A          109 YVYMPNGSLLDRLSCLDGTP-----PLSWH-------MRCKIAQGAANG-INFLHENHHIHRDIKSANILLDEAFTAKIS  175 (307)
T ss_dssp             EECCTTCBHHHHHHTGGGCC-----CCCHH-------HHHHHHHHHHHH-HHHHHHTTEECSCCCGGGEEECTTCCEEEC
T ss_pred             EEecCCCcHHHHHHhccCCC-----CCCHH-------HHHHHHHHHHHH-HHHHhcCCeecCCCCHHHEEEcCCCcEEEe
Confidence            79999999998876432110     01111       123455555554 788999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+......
T Consensus       176 Dfg~~~~~~~  185 (307)
T 2nru_A          176 DFGLARASEK  185 (307)
T ss_dssp             CCTTCEECCS
T ss_pred             eccccccccc
Confidence            9999876543

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=98.29  E-value=4e-07  Score=89.16  Aligned_cols=50  Identities=16%  Similarity=0.210  Sum_probs=42.8

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      ..++..++.+ +..||..|++|+|++|.||+++.+|++.+.|||+...+..
T Consensus       196 ~~~~~ql~~a-L~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~  245 (359)
T 3vhe_A          196 ICYSFQVAKG-MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK  245 (359)
T ss_dssp             HHHHHHHHHH-HHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTS
T ss_pred             HHHHHHHHHH-HHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecc
Confidence            3455555555 8889999999999999999999999999999999987644

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=98.29  E-value=1.4e-06  Score=85.56  Aligned_cols=91  Identities=20%  Similarity=0.248  Sum_probs=58.3

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcC
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMD  119 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG  119 (444)
                      ..++..++.+ +..||..|++|+|++|.||+++.+|++.++|||+....+......       .....| ...+.+...+
T Consensus       129 ~~i~~qi~~a-l~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~-------~~t~~y-~aPE~~~~~~  199 (353)
T 3coi_A          129 QYLVYQMLKG-LKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGY-------VVTRWY-RAPEVILSWM  199 (353)
T ss_dssp             HHHHHHHHHH-HHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC---------------CCSBCC-SCHHHHSCCS
T ss_pred             HHHHHHHHHH-HHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCCCCcccc-------ccCcCc-CCHHHHhCcC
Confidence            3455555555 888999999999999999999999999999999998765432110       001111 1234443333


Q ss_pred             CCCCCCChHHHHHHHHHHHh
Q 013370          120 VVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus       120 ~l~~~~d~~~~~~~L~~~l~  139 (444)
                      ......|+..+..-+..++.
T Consensus       200 ~~~~~~Di~slG~il~el~~  219 (353)
T 3coi_A          200 HYNQTVDIWSVGCIMAEMLT  219 (353)
T ss_dssp             CCCTTHHHHHHHHHHHHHHH
T ss_pred             CCCchhhHHHHHHHHHHHHh
Confidence            44556778877766666654

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=98.29  E-value=1e-06  Score=85.13  Aligned_cols=69  Identities=17%  Similarity=0.227  Sum_probs=52.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.++..  .|..        +.+       ...++..++.+ +..+|..|++|+|+||+||+++.+|.+.+.
T Consensus       110 ~e~~~g~~L~~~l~--~~~~--------~~~-------~~~i~~ql~~a-L~~lH~~givH~Dikp~NIll~~~g~~kl~  171 (286)
T 3uqc_A          110 AEWIRGGSLQEVAD--TSPS--------PVG-------AIRAMQSLAAA-ADAAHRAGVALSIDHPSRVRVSIDGDVVLA  171 (286)
T ss_dssp             EECCCEEEHHHHHT--TCCC--------HHH-------HHHHHHHHHHH-HHHHHHTTCCCCCCSGGGEEEETTSCEEEC
T ss_pred             EEecCCCCHHHHHh--cCCC--------hHH-------HHHHHHHHHHH-HHHHHHCCCccCCCCcccEEEcCCCCEEEE
Confidence            89999999999863  2221        111       23455555554 889999999999999999999999999998


Q ss_pred             ecccccc
Q 013370           81 DFGLLCR   87 (444)
Q Consensus        81 DFGmv~~   87 (444)
                      ++|.+..
T Consensus       172 ~~~~~~~  178 (286)
T 3uqc_A          172 YPATMPD  178 (286)
T ss_dssp             SCCCCTT
T ss_pred             eccccCC
Confidence            8887753

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=98.29  E-value=4.6e-07  Score=86.44  Aligned_cols=50  Identities=22%  Similarity=0.321  Sum_probs=42.9

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      ..++..++.+ +..+|..|++|+|++|.||+++.+|++.++|||+...++.
T Consensus       104 ~~~~~ql~~~-l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~  153 (292)
T 3o0g_A          104 KSFLFQLLKG-LGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGI  153 (292)
T ss_dssp             HHHHHHHHHH-HHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCS
T ss_pred             HHHHHHHHHH-HHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCC
Confidence            3455565555 8889999999999999999999999999999999987653

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=98.29  E-value=4.8e-07  Score=90.98  Aligned_cols=76  Identities=18%  Similarity=0.182  Sum_probs=51.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.++.....+.       .+..       ....++..++.+ +..|+..|++|+|++|.||+++.+|++.++
T Consensus       170 ~e~~~~g~L~~~l~~~~~~-------~~~~-------~~~~i~~qi~~a-L~~LH~~~ivHrDlkp~NIll~~~~~~kL~  234 (373)
T 3c1x_A          170 LPYMKHGDLRNFIRNETHN-------PTVK-------DLIGFGLQVAKG-MKFLASKKFVHRDLAARNCMLDEKFTVKVA  234 (373)
T ss_dssp             EECCTTCBHHHHHHCTTCC-------CBHH-------HHHHHHHHHHHH-HHHHHHTTCCCSCCCGGGEEECTTCCEEEC
T ss_pred             EECCCCCCHHHHHhhcccC-------CCHH-------HHHHHHHHHHHH-HHHHHHCCEecCccchheEEECCCCCEEEe
Confidence            7999999999987533211       1111       123455555554 889999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...+...
T Consensus       235 DFG~a~~~~~~  245 (373)
T 3c1x_A          235 DFGLARDMYDK  245 (373)
T ss_dssp             CC---------
T ss_pred             ecccccccccc
Confidence            99999877543

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=98.29  E-value=8.5e-07  Score=91.22  Aligned_cols=77  Identities=21%  Similarity=0.224  Sum_probs=55.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|++|.++.....+..      .+..       ....++..++.+ +..|+..|++|+|++|.||+++.+|.+.++
T Consensus       257 ~e~~~~gsL~~~l~~~~~~~------~~~~-------~~~~i~~qi~~~-l~~LH~~~ivHrDlkp~Nill~~~~~~kl~  322 (452)
T 1fmk_A          257 TEYMSKGSLLDFLKGETGKY------LRLP-------QLVDMAAQIASG-MAYVERMNYVHRDLRAANILVGENLVCKVA  322 (452)
T ss_dssp             ECCCTTCBHHHHHSHHHHTT------CCHH-------HHHHHHHHHHHH-HHHHHHTTCCCSCCSGGGEEECGGGCEEEC
T ss_pred             ehhhcCCCHHHHHHhcCCCC------CCHH-------HHHHHHHHHHHH-HHHHHhCCeeCCCCChhhEEECCCCCEEEC
Confidence            79999999999875321110      1111       223555555555 888999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...+...
T Consensus       323 DfG~a~~~~~~  333 (452)
T 1fmk_A          323 DFGLARLIEDN  333 (452)
T ss_dssp             CCCTTC-----
T ss_pred             CCccceecCCC
Confidence            99999877643

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=98.29  E-value=6.8e-07  Score=86.46  Aligned_cols=78  Identities=18%  Similarity=0.136  Sum_probs=57.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHc---CccccCCCCCCeEEccCCcE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLET---GILHADPHPGNLRYTSSGQI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~---GfFHADPHPGNILv~~DGrL   77 (444)
                      |||++|+.|.++........    ..++...       ...++..++.+ +..||..   |++|+|++|.||+++.+|++
T Consensus       106 ~e~~~~~~L~~~l~~~~~~~----~~~~~~~-------~~~i~~~i~~~-l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~  173 (326)
T 3uim_A          106 YPYMANGSVASCLRERPESQ----PPLDWPK-------RQRIALGSARG-LAYLHDHCDPKIIHRDVKAANILLDEEFEA  173 (326)
T ss_dssp             EECCTTCBHHHHHHCCSTTC----CCCCHHH-------HHHHHHHHHHH-HHHHHHSSSSCEECCCCSGGGEEECTTCCE
T ss_pred             EEeccCCCHHHHHHhccccC----CCCCHHH-------HHHHHHHHHHH-HHHHHhCCCCCeEeCCCchhhEEECCCCCE
Confidence            79999999999876432110    0011111       23455555554 8889999   99999999999999999999


Q ss_pred             EEEecccccccch
Q 013370           78 GFLDFGLLCRMER   90 (444)
Q Consensus        78 vlLDFGmv~~L~~   90 (444)
                      .++|||+...++.
T Consensus       174 kl~Dfg~~~~~~~  186 (326)
T 3uim_A          174 VVGDFGLAKLMDY  186 (326)
T ss_dssp             EECCCSSCEECCS
T ss_pred             EeccCccccccCc
Confidence            9999999987653

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=98.28  E-value=5.5e-07  Score=90.31  Aligned_cols=76  Identities=21%  Similarity=0.218  Sum_probs=51.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|++|.++.....+ +      ++..+       ...++..++.+ +..||..|++|+|++|.||+++.+|.+.++
T Consensus       125 ~e~~~~~sL~~~l~~~~~-~------~~~~~-------~~~i~~qi~~a-L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~  189 (373)
T 2qol_A          125 TEYMENGSLDSFLRKHDA-Q------FTVIQ-------LVGMLRGIASG-MKYLSDMGYVHRDLAARNILINSNLVCKVS  189 (373)
T ss_dssp             EECCTTCBHHHHHHTTTT-C------SCHHH-------HHHHHHHHHHH-HHHHHHTTCCCSCCCGGGEEECTTCCEEEC
T ss_pred             EeCCCCCcHHHHHHhCCC-C------CCHHH-------HHHHHHHHHHH-HHHHHHCCeeCCCCCcceEEEcCCCCEEEC
Confidence            799999999998764211 1      11221       23455555544 888999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...++..
T Consensus       190 Dfg~a~~~~~~  200 (373)
T 2qol_A          190 DFGLGRVLEDD  200 (373)
T ss_dssp             CC---------
T ss_pred             cCccccccccC
Confidence            99999877654

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=98.28  E-value=5.9e-07  Score=85.98  Aligned_cols=74  Identities=22%  Similarity=0.353  Sum_probs=57.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..+.++..- ...        +..+       ...++..++.+ +..++..|++|+|++|.||+++.+|++.++
T Consensus        99 ~e~~~~~~L~~~~~~-~~~--------~~~~-------~~~~~~qi~~~-l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~  161 (303)
T 3a7i_A           99 MEYLGGGSALDLLEP-GPL--------DETQ-------IATILREILKG-LDYLHSEKKIHRDIKAANVLLSEHGEVKLA  161 (303)
T ss_dssp             EECCTTEEHHHHHTT-SCC--------CHHH-------HHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEECTTSCEEEC
T ss_pred             EEeCCCCcHHHHHhc-CCC--------CHHH-------HHHHHHHHHHH-HHHHHHCCCccCCCChheEEECCCCCEEEe
Confidence            799999999887642 111        1221       23455555555 788999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...+...
T Consensus       162 Dfg~~~~~~~~  172 (303)
T 3a7i_A          162 DFGVAGQLTDT  172 (303)
T ss_dssp             CCTTCEECBTT
T ss_pred             ecccceecCcc
Confidence            99999877653

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=98.28  E-value=2.2e-06  Score=83.65  Aligned_cols=117  Identities=14%  Similarity=0.094  Sum_probs=68.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEcc-----CC
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTS-----SG   75 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~-----DG   75 (444)
                      |||++| .|.++.......+        .+       ....++..++.+ +..|+..|++|+|++|.||+++.     ++
T Consensus       112 ~e~~~~-~L~~~~~~~~~~~--------~~-------~~~~i~~ql~~~-l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~  174 (329)
T 3gbz_A          112 FEYAEN-DLKKYMDKNPDVS--------MR-------VIKSFLYQLING-VNFCHSRRCLHRDLKPQNLLLSVSDASETP  174 (329)
T ss_dssp             EECCSE-EHHHHHHHCTTCC--------HH-------HHHHHHHHHHHH-HHHHHHTTCCCSCCCGGGEEEEC-----CC
T ss_pred             EecCCC-CHHHHHhhcCCCC--------HH-------HHHHHHHHHHHH-HHHHHhCCEECCCCCHHHEEEecCCCCccc
Confidence            789987 6666654322221        11       123556666655 88999999999999999999954     45


Q ss_pred             cEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           76 QIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        76 rLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      .+.++|||+...++......- .   ......| ...|.+.......+..|++.+.--+..++.
T Consensus       175 ~~kl~Dfg~a~~~~~~~~~~~-~---~~~t~~y-~aPE~~~~~~~~~~~~DiwslG~il~ell~  233 (329)
T 3gbz_A          175 VLKIGDFGLARAFGIPIRQFT-H---EIITLWY-RPPEILLGSRHYSTSVDIWSIACIWAEMLM  233 (329)
T ss_dssp             EEEECCTTHHHHHC---------------CCTT-CCHHHHTTCCCCCTHHHHHHHHHHHHHHHH
T ss_pred             eEEECcCCCccccCCcccccC-C---CcCCccc-cCHHHhcCCCCCCcHHHHHHHHHHHHHHHH
Confidence            699999999987754322110 0   0111222 224444433334455677777665655554

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=98.28  E-value=8.5e-06  Score=84.49  Aligned_cols=73  Identities=26%  Similarity=0.313  Sum_probs=54.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccC---CcE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS---GQI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~D---GrL   77 (444)
                      |||++|+.|.+........+        +.       ....++..++.+ +..+|..|++|+|++|.||+++.+   +.+
T Consensus       115 ~e~~~~g~L~~~~~~~~~~~--------~~-------~~~~i~~qi~~~-l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~  178 (494)
T 3lij_A          115 MECYKGGELFDEIIHRMKFN--------EV-------DAAVIIKQVLSG-VTYLHKHNIVHRDLKPENLLLESKEKDALI  178 (494)
T ss_dssp             EECCCSCBHHHHHHHHSSCC--------HH-------HHHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEESCSSTTCCE
T ss_pred             EecCCCCcHHHHHHHcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCceeccCChhhEEEeCCCCCCcE
Confidence            79999999988765432222        11       123455555555 888999999999999999999864   459


Q ss_pred             EEEecccccccc
Q 013370           78 GFLDFGLLCRME   89 (444)
Q Consensus        78 vlLDFGmv~~L~   89 (444)
                      .++|||+...+.
T Consensus       179 kl~DfG~a~~~~  190 (494)
T 3lij_A          179 KIVDFGLSAVFE  190 (494)
T ss_dssp             EECCCTTCEECB
T ss_pred             EEEECCCCeECC
Confidence            999999987654

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=98.28  E-value=6.9e-07  Score=84.81  Aligned_cols=75  Identities=17%  Similarity=0.266  Sum_probs=56.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCc----
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQ----   76 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGr----   76 (444)
                      |||+ |.+|.++.....+ +      ++..       ....++..++.+ +..+|..|++|+|++|.||+++.+|.    
T Consensus        85 ~e~~-~~~L~~~l~~~~~-~------~~~~-------~~~~i~~qi~~~-l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~  148 (298)
T 1csn_A           85 IDLL-GPSLEDLLDLCGR-K------FSVK-------TVAMAAKQMLAR-VQSIHEKSLVYRDIKPDNFLIGRPNSKNAN  148 (298)
T ss_dssp             EECC-CCBHHHHHHHTTT-C------CCHH-------HHHHHHHHHHHH-HHHHHTTTEECCCCCGGGEEECCSSSTTTT
T ss_pred             EEec-CCCHHHHHHHhcc-C------CCHH-------HHHHHHHHHHHH-HHHHHhCCEecCCCCHHHEEeccCCCCCCC
Confidence            7899 8899998764321 0      1122       123556666655 88899999999999999999988776    


Q ss_pred             -EEEEecccccccchh
Q 013370           77 -IGFLDFGLLCRMERK   91 (444)
Q Consensus        77 -LvlLDFGmv~~L~~~   91 (444)
                       +.++|||+...+...
T Consensus       149 ~~kl~Dfg~~~~~~~~  164 (298)
T 1csn_A          149 MIYVVDFGMVKFYRDP  164 (298)
T ss_dssp             CEEECCCTTCEESBCT
T ss_pred             eEEEEECccccccccc
Confidence             999999999877653

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=98.27  E-value=7.5e-07  Score=91.17  Aligned_cols=48  Identities=25%  Similarity=0.372  Sum_probs=42.2

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccc
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME   89 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~   89 (444)
                      .++..++.+ ++.||..|++|+|++|+||+++.+|.+.++|||+...++
T Consensus       160 ~~~~qi~~a-L~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~  207 (458)
T 3rp9_A          160 TLLYNLLVG-VKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVD  207 (458)
T ss_dssp             HHHHHHHHH-HHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred             HHHHHHHHH-HHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhcc
Confidence            455555555 889999999999999999999999999999999998775

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=98.27  E-value=5.5e-06  Score=89.49  Aligned_cols=75  Identities=19%  Similarity=0.235  Sum_probs=57.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.++.......+        ..       .+..++..++.+ +..||..|++|+|++|.||+++.+|.+.++
T Consensus       448 ~E~~~~g~L~~~l~~~~~l~--------~~-------~~~~i~~qi~~~-L~yLH~~~iiHrDLkp~NILl~~~~~~kL~  511 (635)
T 4fl3_A          448 MEMAELGPLNKYLQQNRHVK--------DK-------NIIELVHQVSMG-MKYLEESNFVHRDLAARNVLLVTQHYAKIS  511 (635)
T ss_dssp             EECCTTEEHHHHHHHCTTCC--------HH-------HHHHHHHHHHHH-HHHHHHTTCCCSCCSGGGEEEEETTEEEEC
T ss_pred             EEccCCCCHHHHHhhCCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCEeCCCCChHhEEEeCCCCEEEE
Confidence            79999999999876432221        11       123455555554 888999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...+...
T Consensus       512 DFGla~~~~~~  522 (635)
T 4fl3_A          512 DFGLSKALRAD  522 (635)
T ss_dssp             CTTHHHHTTC-
T ss_pred             EcCCccccccC
Confidence            99998877543

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=98.27  E-value=8.5e-07  Score=85.81  Aligned_cols=77  Identities=19%  Similarity=0.331  Sum_probs=50.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHH---cCccccCCCCCCeEEccCCc-
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLE---TGILHADPHPGNLRYTSSGQ-   76 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~---~GfFHADPHPGNILv~~DGr-   76 (444)
                      |||++|+.|.++.......+     .++...       ...++..++++ +..+|.   .|++|+|++|.||+++.+|. 
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~-----~~~~~~-------~~~~~~qi~~~-l~~LH~~~~~~ivH~dlkp~NIll~~~~~~  144 (307)
T 2eva_A           78 MEYAEGGSLYNVLHGAEPLP-----YYTAAH-------AMSWCLQCSQG-VAYLHSMQPKALIHRDLKPPNLLLVAGGTV  144 (307)
T ss_dssp             EECCTTCBHHHHHHCSSSEE-----CCCHHH-------HHHHHHHHHHH-HHHHHTCSSSCCCCCCCSGGGEEEETTTTE
T ss_pred             EEcCCCCCHHHHHhccCCCC-----ccCHHH-------HHHHHHHHHHH-HHHHHhCCCCCeecCCCChhHEEEeCCCCE
Confidence            79999999999876432110     111111       22344444444 677888   89999999999999999987 


Q ss_pred             EEEEecccccccch
Q 013370           77 IGFLDFGLLCRMER   90 (444)
Q Consensus        77 LvlLDFGmv~~L~~   90 (444)
                      +.++|||+...+..
T Consensus       145 ~kl~Dfg~~~~~~~  158 (307)
T 2eva_A          145 LKICDFGTACDIQT  158 (307)
T ss_dssp             EEECCCCC------
T ss_pred             EEEccccccccccc
Confidence            78999999876654

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=98.27  E-value=4.8e-07  Score=91.76  Aligned_cols=77  Identities=26%  Similarity=0.320  Sum_probs=56.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEcc---CCcE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTS---SGQI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~---DGrL   77 (444)
                      |||++|+.|.+......+.      .++..+       ...++..++.+ +..||..|++|+|++|.||+++.   +|.+
T Consensus       138 ~E~~~gg~L~~~l~~~~~~------~l~~~~-------~~~i~~qi~~a-L~~LH~~~ivHrDlkp~Nill~~~~~~~~~  203 (400)
T 1nxk_A          138 MECLDGGELFSRIQDRGDQ------AFTERE-------ASEIMKSIGEA-IQYLHSINIAHRDVKPENLLYTSKRPNAIL  203 (400)
T ss_dssp             EECCCSEEHHHHHHCC---------CCBHHH-------HHHHHHHHHHH-HHHHHHTTEECCCCCGGGEEESSSSTTCCE
T ss_pred             EEeCCCCcHHHHHHHhCCC------CCCHHH-------HHHHHHHHHHH-HHHHHHCCccccCcCcceEEEecCCCCccE
Confidence            7999999999887642110      012221       23455555555 88899999999999999999997   7899


Q ss_pred             EEEecccccccchh
Q 013370           78 GFLDFGLLCRMERK   91 (444)
Q Consensus        78 vlLDFGmv~~L~~~   91 (444)
                      .++|||+.......
T Consensus       204 kl~DFG~a~~~~~~  217 (400)
T 1nxk_A          204 KLTDFGFAKETTSH  217 (400)
T ss_dssp             EECCCTTCEECC--
T ss_pred             EEEecccccccCCC
Confidence            99999999877653

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=98.27  E-value=6.7e-07  Score=87.17  Aligned_cols=83  Identities=17%  Similarity=0.172  Sum_probs=57.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHH-cCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLE-TGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~-~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      |||++|++|.++......+.......++..       ....++..++.+ +..+|. .|++|+|++|.||+++.+|++.+
T Consensus       122 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~-------~~~~i~~qi~~~-l~~lH~~~~i~H~dl~p~Nil~~~~~~~kl  193 (348)
T 2pml_X          122 YEYMENDSILKFDEYFFVLDKNYTCFIPIQ-------VIKCIIKSVLNS-FSYIHNEKNICHRDVKPSNILMDKNGRVKL  193 (348)
T ss_dssp             EECCTTCBSSEESSSEESSCSSSCCCCCHH-------HHHHHHHHHHHH-HHHHHHTSCEECCCCCGGGEEECTTSCEEE
T ss_pred             EeccCCCcHHHHHHHhhhhhhccccCCCHH-------HHHHHHHHHHHH-HHHHhccCCEeecCCChHhEEEcCCCcEEE
Confidence            799999999997321000000000011111       123556666655 788998 99999999999999999999999


Q ss_pred             Eecccccccchh
Q 013370           80 LDFGLLCRMERK   91 (444)
Q Consensus        80 LDFGmv~~L~~~   91 (444)
                      +|||....+...
T Consensus       194 ~dfg~~~~~~~~  205 (348)
T 2pml_X          194 SDFGESEYMVDK  205 (348)
T ss_dssp             CCCTTCEECBTT
T ss_pred             eccccccccccc
Confidence            999999876543

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=98.26  E-value=2.1e-06  Score=85.76  Aligned_cols=113  Identities=20%  Similarity=0.278  Sum_probs=72.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+ |..|.++.... ..+        ..       ....++..++.+ +..+|..|++|+|++|+||+++.+|++.++
T Consensus       109 ~e~~-~~~L~~~~~~~-~l~--------~~-------~~~~~~~qi~~~-L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~  170 (367)
T 1cm8_A          109 MPFM-GTDLGKLMKHE-KLG--------ED-------RIQFLVYQMLKG-LRYIHAAGIIHRDLKPGNLAVNEDCELKIL  170 (367)
T ss_dssp             EECC-SEEHHHHHHHC-CCC--------HH-------HHHHHHHHHHHH-HHHHHHTTEECCCCCGGGEEECTTCCEEEC
T ss_pred             EecC-CCCHHHHHhcC-CCC--------HH-------HHHHHHHHHHHH-HHHHHHCCccccCcCHHHEEEcCCCCEEEE
Confidence            6777 66777765431 111        11       123455555554 888999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||+....+...... .      ....| ...+.+...+......|++.+.--+..++.
T Consensus       171 Dfg~a~~~~~~~~~~-~------~t~~y-~aPE~~~~~~~~~~~~DiwslG~il~ell~  221 (367)
T 1cm8_A          171 DFGLARQADSEMTGY-V------VTRWY-RAPEVILNWMRYTQTVDIWSVGCIMAEMIT  221 (367)
T ss_dssp             CCTTCEECCSSCCSS-C------SCGGG-CCTHHHHTTTCCCTTHHHHHHHHHHHHHHH
T ss_pred             eeecccccccccCcC-c------CCCCc-CCHHHHhCCCCCChhhhHHHHHHHHHHHHh
Confidence            999998776432111 0      01111 223444443445566788877766666654

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=98.26  E-value=5.8e-07  Score=85.53  Aligned_cols=75  Identities=17%  Similarity=0.154  Sum_probs=57.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.++.....+       .++..       ....++..++.+ +..++..|++|+|++|.||+++.+|++.++
T Consensus        88 ~e~~~~~~L~~~l~~~~~-------~~~~~-------~~~~~~~qi~~~-l~~lH~~~i~H~dlkp~Nili~~~~~~kl~  152 (287)
T 1u59_A           88 MEMAGGGPLHKFLVGKRE-------EIPVS-------NVAELLHQVSMG-MKYLEEKNFVHRDLAARNVLLVNRHYAKIS  152 (287)
T ss_dssp             EECCTTEEHHHHHTTCTT-------TSCHH-------HHHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEEEETTEEEEC
T ss_pred             EEeCCCCCHHHHHHhCCc-------cCCHH-------HHHHHHHHHHHH-HHHHHHCCEeeCCCchheEEEcCCCCEEEC
Confidence            799999999988753211       01112       123556666555 888999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+..
T Consensus       153 Dfg~~~~~~~  162 (287)
T 1u59_A          153 DFGLSKALGA  162 (287)
T ss_dssp             CCTTCEECTT
T ss_pred             cccceeeecc
Confidence            9999987754

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=98.26  E-value=5.8e-07  Score=89.08  Aligned_cols=75  Identities=20%  Similarity=0.317  Sum_probs=56.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEc--cCCcEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYT--SSGQIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~--~DGrLv   78 (444)
                      |||+ |..|.++.....+ +      ++..+       ...++..++.+ +..||..|++|+|++|.||+++  .+|++.
T Consensus       131 ~e~~-g~~L~~~~~~~~~-~------l~~~~-------~~~i~~qi~~~-l~~lH~~~iiHrDlkp~Nill~~~~~~~~k  194 (364)
T 3op5_A          131 MDRF-GSDLQKIYEANAK-R------FSRKT-------VLQLSLRILDI-LEYIHEHEYVHGDIKASNLLLNYKNPDQVY  194 (364)
T ss_dssp             EECE-EEEHHHHHHHTTS-C------CCHHH-------HHHHHHHHHHH-HHHHHHTTEECCCCCGGGEEEESSCTTCEE
T ss_pred             EeCC-CCCHHHHHHhccC-C------CCHHH-------HHHHHHHHHHH-HHHHHHCCeEEecCCHHHEEEecCCCCeEE
Confidence            7899 8899988764311 0      11222       23455555555 8899999999999999999999  889999


Q ss_pred             EEecccccccchh
Q 013370           79 FLDFGLLCRMERK   91 (444)
Q Consensus        79 lLDFGmv~~L~~~   91 (444)
                      ++|||+...+...
T Consensus       195 l~DFG~a~~~~~~  207 (364)
T 3op5_A          195 LVDYGLAYRYCPE  207 (364)
T ss_dssp             ECCCTTCEESSGG
T ss_pred             EEECCcceecccC
Confidence            9999999877654

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=98.26  E-value=9.2e-07  Score=84.10  Aligned_cols=74  Identities=19%  Similarity=0.161  Sum_probs=56.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcC--ccccCCCCCCeEEc-cCCcE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETG--ILHADPHPGNLRYT-SSGQI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~G--fFHADPHPGNILv~-~DGrL   77 (444)
                      |||++|..|.++.......+        ..       ....++..++.+ +..++..|  ++|+|++|.||+++ ++|++
T Consensus       108 ~e~~~~~~L~~~l~~~~~~~--------~~-------~~~~~~~qi~~~-l~~lH~~~~~i~H~dikp~Nil~~~~~~~~  171 (290)
T 1t4h_A          108 TELMTSGTLKTYLKRFKVMK--------IK-------VLRSWCRQILKG-LQFLHTRTPPIIHRDLKCDNIFITGPTGSV  171 (290)
T ss_dssp             EECCCSCBHHHHHHHHSSCC--------HH-------HHHHHHHHHHHH-HHHHHTSSSCCCCSCCCGGGEEESSTTSCE
T ss_pred             EEecCCCCHHHHHHHccCCC--------HH-------HHHHHHHHHHHH-HHHHHcCCCCEEECCCCHHHEEEECCCCCE
Confidence            79999999999876432222        11       123455555555 88899999  99999999999998 78999


Q ss_pred             EEEecccccccch
Q 013370           78 GFLDFGLLCRMER   90 (444)
Q Consensus        78 vlLDFGmv~~L~~   90 (444)
                      .++|||+......
T Consensus       172 kl~Dfg~~~~~~~  184 (290)
T 1t4h_A          172 KIGDLGLATLKRA  184 (290)
T ss_dssp             EECCTTGGGGCCT
T ss_pred             EEeeCCCcccccc
Confidence            9999999865544

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=98.26  E-value=1e-06  Score=84.83  Aligned_cols=76  Identities=25%  Similarity=0.277  Sum_probs=55.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++| .|.++.....+..      ++.+       ....++..++.+ +..+|..|++|+|++|.||+++.+|++.++
T Consensus        98 ~e~~~~-~L~~~l~~~~~~~------~~~~-------~~~~~~~qi~~~-l~~lH~~gi~H~dlkp~Nili~~~~~~kl~  162 (326)
T 1blx_A           98 FEHVDQ-DLTTYLDKVPEPG------VPTE-------TIKDMMFQLLRG-LDFLHSHRVVHRDLKPQNILVTSSGQIKLA  162 (326)
T ss_dssp             EECCSC-BHHHHHHHSCTTC------SCHH-------HHHHHHHHHHHH-HHHHHHTTCCCCCCCGGGEEECTTCCEEEC
T ss_pred             EecCCC-CHHHHHHhcccCC------CCHH-------HHHHHHHHHHHH-HHHHHHCCceeccCCHHHeEEcCCCCEEEe
Confidence            688987 6777665321100      1111       123455555555 888999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...++..
T Consensus       163 Dfg~~~~~~~~  173 (326)
T 1blx_A          163 DFGLARIYSFQ  173 (326)
T ss_dssp             SCCSCCCCCGG
T ss_pred             cCcccccccCC
Confidence            99999877654

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=98.25  E-value=9.5e-07  Score=87.55  Aligned_cols=74  Identities=32%  Similarity=0.417  Sum_probs=51.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEcc---CCcE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTS---SGQI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~---DGrL   77 (444)
                      |||++|+.|.+........        +..       ....++..++.+ +..++..|++|+|++|.||+++.   +|.+
T Consensus       127 ~e~~~~~~L~~~l~~~~~~--------~~~-------~~~~i~~qi~~~-L~~LH~~~ivH~Dikp~NIll~~~~~~~~~  190 (349)
T 2w4o_A          127 LELVTGGELFDRIVEKGYY--------SER-------DAADAVKQILEA-VAYLHENGIVHRDLKPENLLYATPAPDAPL  190 (349)
T ss_dssp             ECCCCSCBHHHHHTTCSSC--------CHH-------HHHHHHHHHHHH-HHHHHHTTCCCCCCCGGGEEESSSSTTCCE
T ss_pred             EEeCCCCCHHHHHHhcCCC--------CHH-------HHHHHHHHHHHH-HHHHHHCCeEecCCCcccEEEecCCCCCCE
Confidence            7999999998876532211        121       123455555554 88899999999999999999975   8999


Q ss_pred             EEEecccccccch
Q 013370           78 GFLDFGLLCRMER   90 (444)
Q Consensus        78 vlLDFGmv~~L~~   90 (444)
                      .++|||+...++.
T Consensus       191 kl~Dfg~a~~~~~  203 (349)
T 2w4o_A          191 KIADFGLSKIVEH  203 (349)
T ss_dssp             EECCCC-------
T ss_pred             EEccCccccccCc
Confidence            9999999877654

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=98.25  E-value=5.5e-07  Score=86.51  Aligned_cols=77  Identities=19%  Similarity=0.223  Sum_probs=51.4

Q ss_pred             CCCcCCCCcccHHhhc--CCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEE
Q 013370            1 MEWMVGESPTDLISLS--TGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~--~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLv   78 (444)
                      |||++|+.|.++....  .+..      ++..       ....++..++.+ +..++..|++|+|++|.||+++.+|++.
T Consensus       111 ~e~~~~~~L~~~l~~~~~~~~~------~~~~-------~~~~i~~qi~~~-l~~LH~~~i~H~dl~p~NIl~~~~~~~k  176 (310)
T 2wqm_A          111 LELADAGDLSRMIKHFKKQKRL------IPER-------TVWKYFVQLCSA-LEHMHSRRVMHRDIKPANVFITATGVVK  176 (310)
T ss_dssp             EECCCSCBHHHHHHHHHHTTCC------CCHH-------HHHHHHHHHHHH-HHHHHHTTCCCCCCCGGGEEECTTSCEE
T ss_pred             EecCCCCCHHHHHHHhcccccC------CCHH-------HHHHHHHHHHHH-HHHHhhCCeeCCCCcHHHEEEcCCCCEE
Confidence            7999999999887642  1110      1111       233555666555 7889999999999999999999999999


Q ss_pred             EEecccccccchh
Q 013370           79 FLDFGLLCRMERK   91 (444)
Q Consensus        79 lLDFGmv~~L~~~   91 (444)
                      ++|||+...++..
T Consensus       177 l~Dfg~~~~~~~~  189 (310)
T 2wqm_A          177 LGDLGLGRFFSSK  189 (310)
T ss_dssp             ECCC---------
T ss_pred             EEeccceeeecCC
Confidence            9999998776543

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=98.24  E-value=9.2e-07  Score=85.52  Aligned_cols=114  Identities=15%  Similarity=0.153  Sum_probs=71.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCC-cEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG-QIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DG-rLvl   79 (444)
                      |||++|..+.++...   .        +..       ....++..++.+ +..||..|++|+|++|.||+++.+| ++.+
T Consensus       112 ~e~~~~~~l~~~~~~---~--------~~~-------~~~~~~~qi~~~-l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl  172 (330)
T 3nsz_A          112 FEHVNNTDFKQLYQT---L--------TDY-------DIRFYMYEILKA-LDYCHSMGIMHRDVKPHNVMIDHEHRKLRL  172 (330)
T ss_dssp             EECCCCCCHHHHGGG---C--------CHH-------HHHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEEETTTTEEEE
T ss_pred             EeccCchhHHHHHHh---C--------CHH-------HHHHHHHHHHHH-HHHHHhCCeeeCCCCHHHEEEcCCCCEEEE
Confidence            789999988776531   1        111       123455555554 8889999999999999999999887 8999


Q ss_pred             EecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           80 LDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        80 LDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      +|||+...+.+.......      ...-+-...+.+...+......|++.+.--+..++.
T Consensus       173 ~Dfg~a~~~~~~~~~~~~------~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~  226 (330)
T 3nsz_A          173 IDWGLAEFYHPGQEYNVR------VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIF  226 (330)
T ss_dssp             CCCTTCEECCTTCCCCSC------CSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHH
T ss_pred             EeCCCceEcCCCCccccc------cccccccChhhhcCCCcCCchhhHHHHHHHHHHHHh
Confidence            999999876653221100      000011123444333344455677766655555543

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=98.24  E-value=2e-06  Score=83.93  Aligned_cols=51  Identities=24%  Similarity=0.382  Sum_probs=42.8

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchh
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~   91 (444)
                      ..++..++.+ +..||..|++|+|++|.||+++.+|++.++|||+...++..
T Consensus       115 ~~~~~qi~~~-L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~  165 (353)
T 2b9h_A          115 QYFIYQTLRA-VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDES  165 (353)
T ss_dssp             HHHHHHHHHH-HHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred             HHHHHHHHHH-HHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccccccccc
Confidence            3455555555 88899999999999999999999999999999999888654

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=98.24  E-value=9.2e-07  Score=82.84  Aligned_cols=79  Identities=23%  Similarity=0.249  Sum_probs=55.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCC-----
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG-----   75 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DG-----   75 (444)
                      |||++|++|.++........    ..++..       ....++..++.+ +..+|..|++|+|++|.||+++.+|     
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~----~~~~~~-------~~~~i~~qi~~a-l~~lH~~~ivH~Dikp~NIl~~~~~~~~~~  157 (289)
T 1x8b_A           90 NEYCNGGSLADAISENYRIM----SYFKEA-------ELKDLLLQVGRG-LRYIHSMSLVHMDIKPSNIFISRTSIPNAA  157 (289)
T ss_dssp             EECCTTCBHHHHHHHHHHHT----CCCCHH-------HHHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEEC--------
T ss_pred             EEecCCCcHHHHHHhhcccc----cCCCHH-------HHHHHHHHHHHH-HHHHHhCCEeecCCCHHHEEEcCCCCCccc
Confidence            79999999999876431000    001111       234566666655 7889999999999999999998554     


Q ss_pred             --------------cEEEEecccccccchh
Q 013370           76 --------------QIGFLDFGLLCRMERK   91 (444)
Q Consensus        76 --------------rLvlLDFGmv~~L~~~   91 (444)
                                    .+.+.|||....++..
T Consensus       158 ~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~  187 (289)
T 1x8b_A          158 SEEGDEDDWASNKVMFKIGDLGHVTRISSP  187 (289)
T ss_dssp             ------------CCCEEECCCTTCEETTCS
T ss_pred             ccccccccccCCceEEEEcccccccccCCc
Confidence                          7999999998877643

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=98.24  E-value=7.7e-07  Score=86.12  Aligned_cols=78  Identities=22%  Similarity=0.316  Sum_probs=57.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEE----ccCCc
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRY----TSSGQ   76 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv----~~DGr   76 (444)
                      |||++|..|.++........     .++..       ....++..++.+ +..|+..|++|+|++|.||++    +.++.
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~-----~~~~~-------~~~~i~~qi~~~-L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~  154 (319)
T 4euu_A           88 MEFCPCGSLYTVLEEPSNAY-----GLPES-------EFLIVLRDVVGG-MNHLRENGIVHRNIKPGNIMRVIGEDGQSV  154 (319)
T ss_dssp             EECCTTCBHHHHHHSGGGTT-----CCCHH-------HHHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEEEECTTSCEE
T ss_pred             EeCCCCCCHHHHHHHhcccc-----CCCHH-------HHHHHHHHHHHH-HHHHHHCCEecCCCCHHHEEEeccCCCCce
Confidence            79999999999876432100     01111       123555555555 889999999999999999999    67778


Q ss_pred             EEEEecccccccchh
Q 013370           77 IGFLDFGLLCRMERK   91 (444)
Q Consensus        77 LvlLDFGmv~~L~~~   91 (444)
                      +.++|||+...++..
T Consensus       155 ~kL~Dfg~a~~~~~~  169 (319)
T 4euu_A          155 YKLTDFGAARELEDD  169 (319)
T ss_dssp             EEECCCTTCEECCTT
T ss_pred             EEEccCCCceecCCC
Confidence            999999999887654

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=98.23  E-value=8.9e-07  Score=86.70  Aligned_cols=77  Identities=16%  Similarity=0.160  Sum_probs=53.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+.|+.+.+......+.       ++..       ....++..++.+ +..||..|++|+|++|.||+++.+|++.++
T Consensus        95 ~~~~~~g~L~~~l~~~~~~-------~~~~-------~~~~i~~qi~~a-L~~LH~~~ivH~Dikp~NIl~~~~~~~kL~  159 (327)
T 3lzb_A           95 TQLMPFGCLLDYVREHKDN-------IGSQ-------YLLNWCVQIAKG-MNYLEDRRLVHRDLAARNVLVKTPQHVKIT  159 (327)
T ss_dssp             ECCCSSCBHHHHHHHTTTC-------CCHH-------HHHHHHHHHHHH-HHHHHHTTCCCSCCCGGGEEEEETTEEEEC
T ss_pred             EEecCCCcHHHHHHhcCCC-------CCHH-------HHHHHHHHHHHH-HHHHhhCCCcCCCCCHHHEEEcCCCCEEEc
Confidence            6889999988877643211       1111       123555555555 889999999999999999999999999999


Q ss_pred             ecccccccchhh
Q 013370           81 DFGLLCRMERKH   92 (444)
Q Consensus        81 DFGmv~~L~~~~   92 (444)
                      |||+...+....
T Consensus       160 DfG~a~~~~~~~  171 (327)
T 3lzb_A          160 DFGLAKLLGAEE  171 (327)
T ss_dssp             CTTC--------
T ss_pred             cCcceeEccCcc
Confidence            999998876543

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=98.23  E-value=7.8e-07  Score=95.20  Aligned_cols=116  Identities=16%  Similarity=0.263  Sum_probs=73.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccC--CcEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS--GQIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~D--GrLv   78 (444)
                      |||++|+.|.+.+..+.|       .+++.+       ...++..++.+ +..||..|++|+|++|.||+++.+  |.+.
T Consensus       233 ~E~~~gg~L~~~i~~~~~-------~l~e~~-------~~~~~~qi~~a-l~ylH~~~iiHRDlKp~Nill~~~~~~~vK  297 (573)
T 3uto_A          233 YEFMSGGELFEKVADEHN-------KMSEDE-------AVEYMRQVCKG-LCHMHENNYVHLDLKPENIMFTTKRSNELK  297 (573)
T ss_dssp             EECCCCCBHHHHHTCTTS-------CEEHHH-------HHHHHHHHHHH-HHHHHHTTEECCCCCGGGEEESSSSCCCEE
T ss_pred             EeecCCCcHHHHHHHhCC-------CCCHHH-------HHHHHHHHHHH-HHHHHHCCeeeccCChhhccccCCCCCCEE
Confidence            899999999887643221       122221       23455555554 888999999999999999999865  8999


Q ss_pred             EEecccccccchhhHHh-HHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           79 FLDFGLLCRMERKHQFA-MLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        79 lLDFGmv~~L~~~~R~~-l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      ++|||+...+++..... ++.      ...| ...|.+...++ ....|++.+.--+..++.
T Consensus       298 l~DFG~a~~~~~~~~~~~~~G------T~~y-~APEv~~~~~y-~~~~DiWSlGvilyeml~  351 (573)
T 3uto_A          298 LIDFGLTAHLDPKQSVKVTTG------TAEF-AAPEVAEGKPV-GYYTDMWSVGVLSYILLS  351 (573)
T ss_dssp             ECCCSSCEECCTTSEEEEECS------SGGG-CCHHHHTTCCB-CHHHHHHHHHHHHHHHHH
T ss_pred             EeeccceeEccCCCceeeeEE------Cccc-cCHHHhCCCCC-CcHHHHHHHHHHHHHHHH
Confidence            99999999987653321 110      0111 11344443332 334577766655555554

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=98.22  E-value=9.3e-07  Score=85.65  Aligned_cols=75  Identities=24%  Similarity=0.241  Sum_probs=56.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCc---E
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQ---I   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGr---L   77 (444)
                      |||++|..|.+........        +..       ....++..++.+ +..+|..|++|+|++|.||+++.+|.   +
T Consensus        93 ~e~~~~~~L~~~~~~~~~~--------~~~-------~~~~~~~qi~~~-l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~  156 (322)
T 2ycf_A           93 LELMEGGELFDKVVGNKRL--------KEA-------TCKLYFYQMLLA-VQYLHENGIIHRDLKPENVLLSSQEEDCLI  156 (322)
T ss_dssp             EECCTTEETHHHHSTTCCC--------CHH-------HHHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEESSSSSSCCE
T ss_pred             EecCCCCcHHHHHhccCCC--------CHH-------HHHHHHHHHHHH-HHHHHHCCeeccCCCHHHEEEecCCCCCeE
Confidence            7999999988876432211        111       123455555554 88899999999999999999998765   9


Q ss_pred             EEEecccccccchh
Q 013370           78 GFLDFGLLCRMERK   91 (444)
Q Consensus        78 vlLDFGmv~~L~~~   91 (444)
                      .++|||+...+...
T Consensus       157 kl~Dfg~~~~~~~~  170 (322)
T 2ycf_A          157 KITDFGHSKILGET  170 (322)
T ss_dssp             EECCCTTCEECCCC
T ss_pred             EEccCccceecccc
Confidence            99999999887654

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=98.22  E-value=3.1e-06  Score=84.75  Aligned_cols=91  Identities=16%  Similarity=0.172  Sum_probs=54.5

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcC
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMD  119 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG  119 (444)
                      ..++..++.+ +..|+..|++|+|++|.||+++.+|++.++|||+..........       ......| ...+.+...+
T Consensus       135 ~~i~~qi~~a-L~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~-------~~~t~~y-~aPE~~~~~~  205 (367)
T 2fst_X          135 QFLIYQILRG-LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTG-------YVATRWY-RAPEIMLNWM  205 (367)
T ss_dssp             HHHHHHHHHH-HHHHHHTTCCCCCCCGGGEEECTTCCEEECC----------------------CCCTT-CCHHHHTTCC
T ss_pred             HHHHHHHHHH-HHHHHHCCeeeCCCCHhhEEECCCCCEEEeeccccccccccCCC-------cCcCcCc-cChHHHcCCc
Confidence            3455555555 88899999999999999999999999999999998876543211       0111222 2345554434


Q ss_pred             CCCCCCChHHHHHHHHHHHh
Q 013370          120 VVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus       120 ~l~~~~d~~~~~~~L~~~l~  139 (444)
                      ......|++.+.--+..++.
T Consensus       206 ~~~~~~DiwslG~il~ell~  225 (367)
T 2fst_X          206 HYNQTVDIWSVGCIMAELLT  225 (367)
T ss_dssp             SCCTTHHHHHHHHHHHHHHH
T ss_pred             CCCchhhHHHHHHHHHHHHh
Confidence            45566788877766666654

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=98.22  E-value=1.1e-06  Score=87.62  Aligned_cols=74  Identities=15%  Similarity=0.153  Sum_probs=56.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.++.....+..      +++.       ....++..++.+ +..|+..|++|+|++|.||+++.+|++.++
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~------~~~~-------~~~~~~~qi~~~-l~~LH~~~ivHrDlkp~NIll~~~~~~kl~  170 (389)
T 3gni_B          105 TSFMAYGSAKDLICTHFMDG------MNEL-------AIAYILQGVLKA-LDYIHHMGYVHRSVKASHILISVDGKVYLS  170 (389)
T ss_dssp             EECCTTCBHHHHHHHTCTTC------CCHH-------HHHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEECTTCCEEEC
T ss_pred             EEccCCCCHHHHHhhhcccC------CCHH-------HHHHHHHHHHHH-HHHHHhCCeecCCCCHHHEEEcCCCCEEEc
Confidence            79999999999876542111      1111       123455555555 888999999999999999999999999999


Q ss_pred             eccccccc
Q 013370           81 DFGLLCRM   88 (444)
Q Consensus        81 DFGmv~~L   88 (444)
                      |||....+
T Consensus       171 dfg~~~~~  178 (389)
T 3gni_B          171 GLRSNLSM  178 (389)
T ss_dssp             CGGGCEEC
T ss_pred             ccccceee
Confidence            99987654

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=98.22  E-value=1.3e-06  Score=83.94  Aligned_cols=76  Identities=18%  Similarity=0.206  Sum_probs=57.7

Q ss_pred             CCCcCCCCcccHHhhc--CCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEE
Q 013370            1 MEWMVGESPTDLISLS--TGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~--~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLv   78 (444)
                      |||++|+.|.+.....  .+.+      ++..       ....++..++.+ +..|+..|++|+|++|.||+++.+|++.
T Consensus       109 ~e~~~~~~L~~~l~~~~~~~~~------~~~~-------~~~~i~~qi~~~-L~~LH~~~ivH~dlkp~NIl~~~~~~~k  174 (317)
T 2buj_A          109 LPFFKRGTLWNEIERLKDKGNF------LTED-------QILWLLLGICRG-LEAIHAKGYAHRDLKPTNILLGDEGQPV  174 (317)
T ss_dssp             EECCTTCBHHHHHHHHHTTTCC------CCHH-------HHHHHHHHHHHH-HHHHHHTTEECCCCCGGGEEECTTSCEE
T ss_pred             EEeCCCCcHHHHHHHHHhcCCC------CCHH-------HHHHHHHHHHHH-HHHHHhCCcccCCCCHHHEEEcCCCCEE
Confidence            7999999998887642  1111      1122       233566666665 7889999999999999999999999999


Q ss_pred             EEecccccccch
Q 013370           79 FLDFGLLCRMER   90 (444)
Q Consensus        79 lLDFGmv~~L~~   90 (444)
                      ++|||+......
T Consensus       175 l~dfg~~~~~~~  186 (317)
T 2buj_A          175 LMDLGSMNQACI  186 (317)
T ss_dssp             ECCCSSCEESCE
T ss_pred             EEecCcchhccc
Confidence            999999877643

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=98.21  E-value=8.6e-06  Score=77.37  Aligned_cols=74  Identities=22%  Similarity=0.298  Sum_probs=54.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccC---CcE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS---GQI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~D---GrL   77 (444)
                      |||++|..+.+........+        ..       ....++..++.+ +..|+..|++|+|++|.||+++.+   +.+
T Consensus       100 ~e~~~~~~L~~~l~~~~~~~--------~~-------~~~~i~~qi~~~-l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~  163 (287)
T 2wei_A          100 GELYTGGELFDEIIKRKRFS--------EH-------DAARIIKQVFSG-ITYMHKHNIVHRDLKPENILLESKEKDCDI  163 (287)
T ss_dssp             ECCCCSCBHHHHHHHHSSCC--------HH-------HHHHHHHHHHHH-HHHHHHTTCCCSCCCGGGEEESCSSTTCCE
T ss_pred             EEccCCCCHHHHHHhcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCeeccCCChhhEEEecCCCcccE
Confidence            79999999887765332221        11       233566666655 788999999999999999999764   479


Q ss_pred             EEEecccccccch
Q 013370           78 GFLDFGLLCRMER   90 (444)
Q Consensus        78 vlLDFGmv~~L~~   90 (444)
                      .++|||+...+..
T Consensus       164 kL~Dfg~~~~~~~  176 (287)
T 2wei_A          164 KIIDFGLSTCFQQ  176 (287)
T ss_dssp             EECSTTGGGTBCC
T ss_pred             EEeccCcceeecC
Confidence            9999999876654

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=98.20  E-value=3.2e-06  Score=88.51  Aligned_cols=75  Identities=23%  Similarity=0.371  Sum_probs=56.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEE---ccCCcE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRY---TSSGQI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv---~~DGrL   77 (444)
                      |||+ |..|.++.....+       .++..       ....++..++.+ +..||..|++|+|++|.||++   +.+|.+
T Consensus        82 me~~-g~sL~~ll~~~~~-------~l~~~-------~~~~i~~qi~~a-L~yLH~~gIvHrDIKP~NILl~~~~~~~~v  145 (483)
T 3sv0_A           82 MDLL-GPSLEDLFNFCSR-------KLSLK-------TVLMLADQMINR-VEFVHSKSFLHRDIKPDNFLMGLGRRANQV  145 (483)
T ss_dssp             EECC-CCBHHHHHHHTTT-------CCCHH-------HHHHHHHHHHHH-HHHHHHTTEECCCCCGGGEEECCGGGTTCE
T ss_pred             EECC-CCCHHHHHHhhcC-------CCCHH-------HHHHHHHHHHHH-HHHHHHCCEeecccCcceEEEecCCCCCeE
Confidence            7899 8889988764221       01122       123556665555 889999999999999999999   588999


Q ss_pred             EEEecccccccchh
Q 013370           78 GFLDFGLLCRMERK   91 (444)
Q Consensus        78 vlLDFGmv~~L~~~   91 (444)
                      .++|||+...+...
T Consensus       146 kL~DFGla~~~~~~  159 (483)
T 3sv0_A          146 YIIDFGLAKKYRDT  159 (483)
T ss_dssp             EECCCTTCEECBCT
T ss_pred             EEEeCCcceeccCC
Confidence            99999999877654

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=98.20  E-value=8.8e-07  Score=86.01  Aligned_cols=49  Identities=27%  Similarity=0.363  Sum_probs=42.4

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      .++..++.+ +..|+..|++|+|++|.||+++.+|++.++|||+...++.
T Consensus       123 ~~~~qi~~~-l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~  171 (311)
T 3niz_A          123 IYLYQLLRG-VAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGI  171 (311)
T ss_dssp             HHHHHHHHH-HHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTS
T ss_pred             HHHHHHHHH-HHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCC
Confidence            455555554 8889999999999999999999999999999999987653

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=98.20  E-value=1.5e-06  Score=86.38  Aligned_cols=50  Identities=24%  Similarity=0.280  Sum_probs=42.7

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchh
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~   91 (444)
                      .++..++.+ +..++..|++|+|++|.||+++.+|.+.++|||+...+++.
T Consensus       112 ~i~~qi~~a-L~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~  161 (336)
T 3h4j_B          112 RFFQQIICA-IEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG  161 (336)
T ss_dssp             HHHHHHHHH-HHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS
T ss_pred             HHHHHHHHH-HHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCC
Confidence            455555555 88899999999999999999999999999999998776543

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=98.20  E-value=1.3e-05  Score=85.96  Aligned_cols=76  Identities=16%  Similarity=0.145  Sum_probs=57.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.++.....+       .++..+       ...++..++.+ +..|+..|++|+|++|.||+++.+|.+.++
T Consensus       414 ~E~~~~g~L~~~l~~~~~-------~l~~~~-------~~~i~~qi~~~-L~~LH~~~iiHrDlkp~NILl~~~~~vkL~  478 (613)
T 2ozo_A          414 MEMAGGGPLHKFLVGKRE-------EIPVSN-------VAELLHQVSMG-MKYLEEKNFVHRNLAARNVLLVNRHYAKIS  478 (613)
T ss_dssp             EECCTTCBHHHHHTTCTT-------TSCHHH-------HHHHHHHHHHH-HHHHHHTTCCCSCCSGGGEEEEETTEEEEC
T ss_pred             EEeCCCCcHHHHHhhccC-------CCCHHH-------HHHHHHHHHHH-HHHHHHCCEEcCcCCHHHEEEcCCCcEEEe
Confidence            799999999988753211       011221       23455555554 888999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...+...
T Consensus       479 DFGla~~~~~~  489 (613)
T 2ozo_A          479 DFGLSKALGAD  489 (613)
T ss_dssp             CCSTTTTCC--
T ss_pred             eccCcccccCC
Confidence            99999887543

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=98.19  E-value=1.9e-06  Score=86.16  Aligned_cols=93  Identities=14%  Similarity=0.133  Sum_probs=59.5

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEc-cCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhc
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYT-SSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEM  118 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~-~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~l  118 (444)
                      ..++..++.+ +..||..|++|+|++|.||+++ .+|++.++|||+...+.+.....-.     .....| ...+.+...
T Consensus       144 ~~i~~qi~~a-L~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~-----~~t~~y-~aPE~~~~~  216 (383)
T 3eb0_A          144 SIYIYQLFRA-VGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAY-----ICSRFY-RAPELMLGA  216 (383)
T ss_dssp             HHHHHHHHHH-HHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCC-----CCCSSC-CCHHHHTTC
T ss_pred             HHHHHHHHHH-HHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCc-----ccCCCc-cCHHHhcCC
Confidence            3455555555 8889999999999999999998 6899999999999877553321100     001111 123444333


Q ss_pred             CCCCCCCChHHHHHHHHHHHh
Q 013370          119 DVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus       119 G~l~~~~d~~~~~~~L~~~l~  139 (444)
                      ....+..|++.+.--+..++.
T Consensus       217 ~~~~~~~DiwslG~il~ell~  237 (383)
T 3eb0_A          217 TEYTPSIDLWSIGCVFGELIL  237 (383)
T ss_dssp             SSCCTHHHHHHHHHHHHHHHH
T ss_pred             CCCCcchhhhhHHHHHHHHHh
Confidence            334455677777666655554

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=98.19  E-value=7.3e-07  Score=86.52  Aligned_cols=88  Identities=14%  Similarity=0.146  Sum_probs=57.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchh-hHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHL-DRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~-~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      |||++|++|.++........... ..+. ...... ......++..++.+ +..||..|++|+|++|.||+++.+|.+.+
T Consensus       129 ~e~~~~g~L~~~l~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~qi~~~-l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl  205 (333)
T 2i1m_A          129 TEYCCYGDLLNFLRRKSRVLETD-PAFAIANSTAS-TRDLLHFSSQVAQG-MAFLASKNCIHRDVAARNVLLTNGHVAKI  205 (333)
T ss_dssp             EECCTTEEHHHHHHHHHHHHSCC--------CCCC-HHHHHHHHHHHHHH-HHHHHHTTEECSCCSGGGCEEEGGGEEEB
T ss_pred             EecCCCCcHHHHHHHhccccccc-ccccccccccC-HHHHHHHHHHHHHH-HHHHhcCCcccCCcccceEEECCCCeEEE
Confidence            79999999998876431000000 0000 000001 11233555555555 88899999999999999999999999999


Q ss_pred             Eecccccccchh
Q 013370           80 LDFGLLCRMERK   91 (444)
Q Consensus        80 LDFGmv~~L~~~   91 (444)
                      +|||+...+...
T Consensus       206 ~Dfg~~~~~~~~  217 (333)
T 2i1m_A          206 GDFGLARDIMND  217 (333)
T ss_dssp             CCCGGGCCGGGC
T ss_pred             Cccccccccccc
Confidence            999999876543

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=98.19  E-value=1.5e-06  Score=83.39  Aligned_cols=72  Identities=21%  Similarity=0.269  Sum_probs=51.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.++..... ..      ++..+       ...++..++.+ +..+|..|++|+|++|.||+++ +|++.++
T Consensus       108 ~e~~~~~~L~~~l~~~~-~~------~~~~~-------~~~i~~qi~~a-l~~lH~~~i~H~dlkp~NIl~~-~~~~~l~  171 (319)
T 2y4i_B          108 TSLCKGRTLYSVVRDAK-IV------LDVNK-------TRQIAQEIVKG-MGYLHAKGILHKDLKSKNVFYD-NGKVVIT  171 (319)
T ss_dssp             CBCCCSEEHHHHTTSSC-CC------CCSHH-------HHHHHHHHHHH-HHHHHHTTCCCCCCCSTTEEEC---CCEEC
T ss_pred             eecccCCcHHHHHHhcC-CC------CCHHH-------HHHHHHHHHHH-HHHHHhCCccccCCChhhEEEe-CCCEEEe
Confidence            89999999998875321 11      11111       23455555555 8889999999999999999998 7899999


Q ss_pred             eccccccc
Q 013370           81 DFGLLCRM   88 (444)
Q Consensus        81 DFGmv~~L   88 (444)
                      |||+....
T Consensus       172 Dfg~~~~~  179 (319)
T 2y4i_B          172 DFGLFSIS  179 (319)
T ss_dssp             CCSCCC--
T ss_pred             ecCCcccc
Confidence            99997654

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=98.18  E-value=1.7e-06  Score=87.26  Aligned_cols=91  Identities=14%  Similarity=0.164  Sum_probs=59.9

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEc-cCCcEEEEecccccccchhhHHh-HHHHHHHHHhCCHHHHHHHHHhc
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYT-SSGQIGFLDFGLLCRMERKHQFA-MLASIVHIVNGDWQSLVHSLTEM  118 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~-~DGrLvlLDFGmv~~L~~~~R~~-l~~ll~alv~~D~~~la~~l~~l  118 (444)
                      .++..++.+ +..+|..|++|+|++|.||+++ .+|.+.++|||+...+....... +.       ..-+....+.+...
T Consensus       145 ~~~~qi~~a-L~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~~~~~~-------~t~~y~aPE~~~~~  216 (394)
T 4e7w_A          145 LYMYQLLRS-LAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSYI-------CSRYYRAPELIFGA  216 (394)
T ss_dssp             HHHHHHHHH-HHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSSC-------SCGGGCCHHHHTTC
T ss_pred             HHHHHHHHH-HHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCCCCcccc-------cCcCccCHHHHcCC
Confidence            455555554 8889999999999999999999 78999999999998765432211 00       00111224444333


Q ss_pred             CCCCCCCChHHHHHHHHHHHh
Q 013370          119 DVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus       119 G~l~~~~d~~~~~~~L~~~l~  139 (444)
                      .......|++.+.--+..++.
T Consensus       217 ~~~~~~~DiwSlG~il~ell~  237 (394)
T 4e7w_A          217 TNYTTNIDIWSTGCVMAELMQ  237 (394)
T ss_dssp             SSCCTHHHHHHHHHHHHHHHH
T ss_pred             CCCCcHHHHHHHHHHHHHHHh
Confidence            334455677777666666554

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=98.18  E-value=3.2e-06  Score=91.62  Aligned_cols=76  Identities=22%  Similarity=0.155  Sum_probs=57.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.++..... .+      ++...       ...++..++.+ +..+|..|++|+|++|.||+++.+|++.++
T Consensus       469 ~E~~~~g~L~~~l~~~~-~~------l~~~~-------~~~i~~qi~~a-L~~LH~~givHrDikp~NILl~~~~~vkL~  533 (656)
T 2j0j_A          469 MELCTLGELRSFLQVRK-FS------LDLAS-------LILYAYQLSTA-LAYLESKRFVHRDIAARNVLVSSNDCVKLG  533 (656)
T ss_dssp             EECCTTCBHHHHHHHTT-TT------CCHHH-------HHHHHHHHHHH-HHHHHHTTCCCSCCSGGGEEEEETTEEEEC
T ss_pred             EEcCCCCcHHHHHHhcc-CC------CCHHH-------HHHHHHHHHHH-HHHHHhCCccccccchHhEEEeCCCCEEEE
Confidence            79999999999876432 11      11111       23445555554 888999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...+...
T Consensus       534 DFG~a~~~~~~  544 (656)
T 2j0j_A          534 DFGLSRYMEDS  544 (656)
T ss_dssp             CCCCCCSCCC-
T ss_pred             ecCCCeecCCC
Confidence            99999887654

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=98.18  E-value=1.1e-06  Score=86.34  Aligned_cols=78  Identities=26%  Similarity=0.316  Sum_probs=55.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccC---CcE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS---GQI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~D---GrL   77 (444)
                      |||++|++|.++.....+..      ++..       ....++..++.+ +..|+..|++|+|++|.||+++.+   +.+
T Consensus       105 ~e~~~gg~L~~~l~~~~~~~------l~~~-------~~~~i~~ql~~~-l~~LH~~~ivH~dlkp~NIll~~~~~~~~~  170 (336)
T 3fhr_A          105 MECMEGGELFSRIQERGDQA------FTER-------EAAEIMRDIGTA-IQFLHSHNIAHRDVKPENLLYTSKEKDAVL  170 (336)
T ss_dssp             EECCTTEEHHHHHHTC-CCC------CBHH-------HHHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEESCSSTTCCE
T ss_pred             EeccCCCCHHHHHHhcCCCC------CCHH-------HHHHHHHHHHHH-HHHHHhCCeecCCCCHHHEEEEecCCCceE
Confidence            79999999999876432111      1222       123556666655 888999999999999999999874   459


Q ss_pred             EEEecccccccchhh
Q 013370           78 GFLDFGLLCRMERKH   92 (444)
Q Consensus        78 vlLDFGmv~~L~~~~   92 (444)
                      .++|||+....+...
T Consensus       171 kl~Dfg~~~~~~~~~  185 (336)
T 3fhr_A          171 KLTDFGFAKETTQNA  185 (336)
T ss_dssp             EECCCTTCEEC----
T ss_pred             EEeccccceeccccc
Confidence            999999998776543

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=98.18  E-value=9.5e-07  Score=86.24  Aligned_cols=76  Identities=16%  Similarity=0.161  Sum_probs=57.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.+.+......+.       ++...       ...++..++.+ +..||..|++|+|++|.||+++.+|++.++
T Consensus        95 ~e~~~~g~L~~~l~~~~~~-------~~~~~-------~~~~~~qi~~~-l~~LH~~~ivH~Dikp~NIll~~~~~~kl~  159 (327)
T 3poz_A           95 TQLMPFGCLLDYVREHKDN-------IGSQY-------LLNWCVQIAKG-MNYLEDRRLVHRDLAARNVLVKTPQHVKIT  159 (327)
T ss_dssp             EECCTTCBHHHHHHHSTTS-------CCHHH-------HHHHHHHHHHH-HHHHHHTTCCCSCCCGGGEEEEETTEEEEC
T ss_pred             EEecCCCcHHHHHHhcCCC-------CCHHH-------HHHHHHHHHHH-HHHHhhCCeeCCCCChheEEECCCCCEEEc
Confidence            6889999988877643211       11111       23455555554 889999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...++..
T Consensus       160 Dfg~a~~~~~~  170 (327)
T 3poz_A          160 DFGLAKLLGAE  170 (327)
T ss_dssp             CTTHHHHHTTT
T ss_pred             cCcceeEccCC
Confidence            99999877554

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=98.17  E-value=1.1e-05  Score=78.13  Aligned_cols=79  Identities=22%  Similarity=0.208  Sum_probs=54.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCC---cE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG---QI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DG---rL   77 (444)
                      |||++|++|.++.......+ ..-..++..       ....++..++.+ +..|+..|++|+|++|.||+++.+|   .+
T Consensus       112 ~e~~~~~~L~~~l~~~~~~~-~~~~~~~~~-------~~~~i~~qi~~a-l~~LH~~~i~H~dlkp~NIli~~~~~~~~~  182 (327)
T 2yfx_A          112 MELMAGGDLKSFLRETRPRP-SQPSSLAML-------DLLHVARDIACG-CQYLEENHFIHRDIAARNCLLTCPGPGRVA  182 (327)
T ss_dssp             EECCTTEEHHHHHHHTSCCS-SSTTSCCHH-------HHHHHHHHHHHH-HHHHHHTTCCCSCCCGGGEEESCSSTTCCE
T ss_pred             EecCCCCcHHHHHHhhcccc-cccccccHH-------HHHHHHHHHHHH-HHHHhhCCeecCcCCHhHEEEecCCCcceE
Confidence            79999999999887542111 000011111       123455555555 8889999999999999999999544   69


Q ss_pred             EEEeccccccc
Q 013370           78 GFLDFGLLCRM   88 (444)
Q Consensus        78 vlLDFGmv~~L   88 (444)
                      .++|||+...+
T Consensus       183 kl~Dfg~~~~~  193 (327)
T 2yfx_A          183 KIGDFGMARDI  193 (327)
T ss_dssp             EECCCHHHHHH
T ss_pred             EECcccccccc
Confidence            99999987644

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=98.17  E-value=1.2e-06  Score=84.82  Aligned_cols=50  Identities=28%  Similarity=0.483  Sum_probs=41.9

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchh
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~   91 (444)
                      .++..++.+ +..|+..|++|+|++|.||+++.+|++.++|||+...++..
T Consensus       161 ~i~~qi~~a-L~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~  210 (311)
T 3p1a_A          161 GYLRDTLLA-LAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA  210 (311)
T ss_dssp             HHHHHHHHH-HHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC--
T ss_pred             HHHHHHHHH-HHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccC
Confidence            455555554 88899999999999999999999999999999998877654

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=98.17  E-value=1.6e-06  Score=89.21  Aligned_cols=76  Identities=22%  Similarity=0.184  Sum_probs=56.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|++|.++........      ++..       ....++..++.+ +..|+..|++|+|++|.||+++.+|.+.++
T Consensus       266 ~e~~~~g~L~~~l~~~~~~~------~~~~-------~~~~~~~qi~~~-l~~LH~~~ivHrDlkp~Nill~~~~~~kl~  331 (450)
T 1k9a_A          266 TEYMAKGSLVDYLRSRGRSV------LGGD-------CLLKFSLDVCEA-MEYLEGNNFVHRDLAARNVLVSEDNVAKVS  331 (450)
T ss_dssp             EECCTTCBHHHHHHHHCTTT------CCHH-------HHHHHHHHHHHH-HHHHHHTTEECSCCCGGGEEECTTSCEEEC
T ss_pred             EEecCCCcHHHHHHhcCCCC------CCHH-------HHHHHHHHHHHH-HHHHHhCCeeCCCCCHhhEEECCCCCEEEe
Confidence            79999999999876432100      1111       123455555544 888999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+......
T Consensus       332 DfG~a~~~~~  341 (450)
T 1k9a_A          332 DFGLTKEASS  341 (450)
T ss_dssp             CCTTCEECC-
T ss_pred             eCCCcccccc
Confidence            9999876554

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=98.17  E-value=7.3e-07  Score=88.60  Aligned_cols=121  Identities=14%  Similarity=0.060  Sum_probs=70.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++ ++|.++........       ....+.. ......++..++.+ +..||..|++|+|++|.||+++.+|++.++
T Consensus       167 ~e~~~-~~L~~~l~~~~~~~-------~~~~~~~-~~vk~~i~~qi~~a-L~~LH~~~ivHrDikp~NIll~~~~~~kL~  236 (371)
T 3q60_A          167 MPAAS-VDLELLFSTLDFVY-------VFRGDEG-ILALHILTAQLIRL-AANLQSKGLVHGHFTPDNLFIMPDGRLMLG  236 (371)
T ss_dssp             ECCCS-EEHHHHHHHHHHSC-------CCCHHHH-HHHHHHHHHHHHHH-HHHHHHTTEEETTCSGGGEEECTTSCEEEC
T ss_pred             ecCCC-CCHHHHHHHhcccc-------chhhhhh-hhhHHHHHHHHHHH-HHHHHHCCCccCcCCHHHEEECCCCCEEEE
Confidence            78998 58888776431110       0011100 00002334445444 888999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhc-CCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEM-DVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~l-G~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||+....+.........        -.....+.+..- ....+..|++.+.--+..++.
T Consensus       237 DFG~a~~~~~~~~~~~~t--------~~y~aPE~~~~~~~~~~~~~DiwSlG~il~ellt  288 (371)
T 3q60_A          237 DVSALWKVGTRGPASSVP--------VTYAPREFLNASTATFTHALNAWQLGLSIYRVWC  288 (371)
T ss_dssp             CGGGEEETTCEEEGGGSC--------GGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHH
T ss_pred             ecceeeecCCCccCccCC--------cCCcChhhccCCCCCcCccccHHHHHHHHHHHHh
Confidence            999998776543211111        111123333210 123344677777666666553

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=98.17  E-value=1.9e-06  Score=84.97  Aligned_cols=75  Identities=21%  Similarity=0.168  Sum_probs=54.7

Q ss_pred             CCCcCCC-CcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGE-SPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~-kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      |||+.++ .+.++......++        ..       ....++..++.+ +..|+..|++|+|++|.||+++.+|++.+
T Consensus       108 ~e~~~~g~~l~~~~~~~~~l~--------~~-------~~~~i~~qi~~~-L~~LH~~~ivH~Dlkp~NIll~~~~~~kL  171 (335)
T 3dls_A          108 MEKHGSGLDLFAFIDRHPRLD--------EP-------LASYIFRQLVSA-VGYLRLKDIIHRDIKDENIVIAEDFTIKL  171 (335)
T ss_dssp             EECCTTSCBHHHHHHTCCCCC--------HH-------HHHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEECTTSCEEE
T ss_pred             EEeCCCCccHHHHHHhcCCCC--------HH-------HHHHHHHHHHHH-HHHHHhCCeEEeccCHHHEEEcCCCcEEE
Confidence            6777444 7777765322221        11       123455555555 78899999999999999999999999999


Q ss_pred             Eecccccccchh
Q 013370           80 LDFGLLCRMERK   91 (444)
Q Consensus        80 LDFGmv~~L~~~   91 (444)
                      +|||+...++..
T Consensus       172 ~Dfg~a~~~~~~  183 (335)
T 3dls_A          172 IDFGSAAYLERG  183 (335)
T ss_dssp             CCCTTCEECCTT
T ss_pred             eecccceECCCC
Confidence            999999877653

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=98.16  E-value=8.8e-07  Score=87.12  Aligned_cols=74  Identities=22%  Similarity=0.247  Sum_probs=56.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCC--cEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG--QIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DG--rLv   78 (444)
                      |||+ |.+|.++......+        +..       ....++..++.+ +..|+..|++|+|++|.||+++.+|  ++.
T Consensus       131 ~e~~-~~~L~~~l~~~~~~--------~~~-------~~~~i~~qi~~a-L~~LH~~~ivH~Dlkp~NIll~~~~~~~~k  193 (345)
T 2v62_A          131 MERL-GIDLQKISGQNGTF--------KKS-------TVLQLGIRMLDV-LEYIHENEYVHGDIKAANLLLGYKNPDQVY  193 (345)
T ss_dssp             EECE-EEEHHHHCBGGGBC--------CHH-------HHHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEEESSSTTSEE
T ss_pred             Eecc-CCCHHHHHHhcCCC--------CHH-------HHHHHHHHHHHH-HHHHHhCCeeCCCcCHHHEEEccCCCCcEE
Confidence            7899 88888876532211        122       233566666655 8889999999999999999999887  999


Q ss_pred             EEecccccccchh
Q 013370           79 FLDFGLLCRMERK   91 (444)
Q Consensus        79 lLDFGmv~~L~~~   91 (444)
                      ++|||+...+.+.
T Consensus       194 L~Dfg~a~~~~~~  206 (345)
T 2v62_A          194 LADYGLSYRYCPN  206 (345)
T ss_dssp             ECCCTTCEESSGG
T ss_pred             EEeCCCceecccc
Confidence            9999999877543

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=98.16  E-value=1.4e-06  Score=85.85  Aligned_cols=76  Identities=18%  Similarity=0.271  Sum_probs=57.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCC--cEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG--QIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DG--rLv   78 (444)
                      |||+ |.+|.++.....+.+      ++..       ....++..++.+ +..|+..|++|+|++|.||+++.+|  ++.
T Consensus       137 ~e~~-~~~L~~~l~~~~~~~------l~~~-------~~~~i~~qi~~~-L~~LH~~~ivH~Dikp~NIl~~~~~~~~~k  201 (352)
T 2jii_A          137 LPSL-GRSLQSALDVSPKHV------LSER-------SVLQVACRLLDA-LEFLHENEYVHGNVTAENIFVDPEDQSQVT  201 (352)
T ss_dssp             EECC-CEEHHHHHHHSGGGC------CCHH-------HHHHHHHHHHHH-HHHHHHTTCBCSCCCGGGEEEETTEEEEEE
T ss_pred             ecCC-CcCHHHHHHhCCcCC------CCHH-------HHHHHHHHHHHH-HHHHHhCCccCCCCCHHHEEEcCCCCceEE
Confidence            7899 999999876431100      1111       223556666655 8889999999999999999999998  999


Q ss_pred             EEecccccccchh
Q 013370           79 FLDFGLLCRMERK   91 (444)
Q Consensus        79 lLDFGmv~~L~~~   91 (444)
                      ++|||+...+.+.
T Consensus       202 l~Dfg~a~~~~~~  214 (352)
T 2jii_A          202 LAGYGFAFRYCPS  214 (352)
T ss_dssp             ECCGGGCBCSSGG
T ss_pred             EecCcceeeccCC
Confidence            9999999877654

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=98.14  E-value=2.7e-06  Score=90.19  Aligned_cols=68  Identities=24%  Similarity=0.343  Sum_probs=54.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|.+|.++...                .       ..++..++++ +..+|..|++|+|+||.||+++.  ++.++
T Consensus       418 mE~~~ggsL~~~l~~----------------~-------~~i~~qi~~a-L~~LH~~gIiHrDiKp~NILl~~--~~kL~  471 (540)
T 3en9_A          418 MSYINGKLAKDVIED----------------N-------LDIAYKIGEI-VGKLHKNDVIHNDLTTSNFIFDK--DLYII  471 (540)
T ss_dssp             EECCCSEEHHHHSTT----------------C-------THHHHHHHHH-HHHHHHTTEECTTCCTTSEEESS--SEEEC
T ss_pred             EECCCCCCHHHHHHH----------------H-------HHHHHHHHHH-HHHHHHCcCccCCCCHHHEEECC--eEEEE
Confidence            899999988887541                0       1344555444 88899999999999999999998  99999


Q ss_pred             ecccccccchhhHH
Q 013370           81 DFGLLCRMERKHQF   94 (444)
Q Consensus        81 DFGmv~~L~~~~R~   94 (444)
                      |||+...+++....
T Consensus       472 DFGla~~~~~~~~~  485 (540)
T 3en9_A          472 DFGLGKISNLDEDK  485 (540)
T ss_dssp             CCTTCEECCCHHHH
T ss_pred             ECccCEECCCcccc
Confidence            99999998875443

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=98.14  E-value=2.3e-06  Score=87.16  Aligned_cols=75  Identities=24%  Similarity=0.236  Sum_probs=54.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCC---cE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG---QI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DG---rL   77 (444)
                      |||++|+.|.+.......++        ..       ....++..++.+ +..||..|++|+|++|.||+++.++   .+
T Consensus       218 ~e~~~~g~L~~~l~~~~~~~--------~~-------~~~~i~~qi~~~-l~~LH~~~ivHrDlkp~NIll~~~~~~~~~  281 (419)
T 3i6u_A          218 LELMEGGELFDKVVGNKRLK--------EA-------TCKLYFYQMLLA-VQYLHENGIIHRDLKPENVLLSSQEEDCLI  281 (419)
T ss_dssp             EECCTTCBGGGGTSSSCCCC--------HH-------HHHHHHHHHHHH-HHHHHHTTCCCSCCCGGGEEESSSSSSCCE
T ss_pred             EEcCCCCcHHHHHhccCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCccccCCChHhEEEecCCCcceE
Confidence            79999999988764322221        11       123455555554 8889999999999999999998655   59


Q ss_pred             EEEecccccccchh
Q 013370           78 GFLDFGLLCRMERK   91 (444)
Q Consensus        78 vlLDFGmv~~L~~~   91 (444)
                      .++|||+...+++.
T Consensus       282 kl~DFG~a~~~~~~  295 (419)
T 3i6u_A          282 KITDFGHSKILGET  295 (419)
T ss_dssp             EECCSSTTTSCC--
T ss_pred             EEeecccceecCCC
Confidence            99999999887654

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=98.14  E-value=2.1e-06  Score=81.31  Aligned_cols=75  Identities=17%  Similarity=0.090  Sum_probs=55.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcC--ccccCCCCCCeEEccCCc--
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETG--ILHADPHPGNLRYTSSGQ--   76 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~G--fFHADPHPGNILv~~DGr--   76 (444)
                      |||++|+++.+......+ +      ++...       ...++..++.+ +..+|..|  ++|+|++|.||+++.+|.  
T Consensus       100 ~e~~~~~~L~~~l~~~~~-~------~~~~~-------~~~~~~~l~~~-l~~lH~~~~~ivH~dikp~Nil~~~~~~~~  164 (287)
T 4f0f_A          100 MEFVPCGDLYHRLLDKAH-P------IKWSV-------KLRLMLDIALG-IEYMQNQNPPIVHRDLRSPNIFLQSLDENA  164 (287)
T ss_dssp             EECCTTCBHHHHHHCTTS-C------CCHHH-------HHHHHHHHHHH-HHHHHTSSSCCBCSCCSGGGEEESCCCTTC
T ss_pred             EEecCCCCHHHHHhcccC-C------ccHHH-------HHHHHHHHHHH-HHHHHhCCCCeecCCCCcceEEEeccCCCC
Confidence            799999998776643211 0      11221       23455555554 88899999  999999999999998887  


Q ss_pred             ---EEEEecccccccch
Q 013370           77 ---IGFLDFGLLCRMER   90 (444)
Q Consensus        77 ---LvlLDFGmv~~L~~   90 (444)
                         +.++|||+......
T Consensus       165 ~~~~kl~Dfg~~~~~~~  181 (287)
T 4f0f_A          165 PVCAKVADFGLSQQSVH  181 (287)
T ss_dssp             SCCEEECCCTTCBCCSS
T ss_pred             ceeEEeCCCCccccccc
Confidence               99999999875544

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=98.13  E-value=1.9e-06  Score=87.33  Aligned_cols=76  Identities=21%  Similarity=0.446  Sum_probs=56.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEcc--CCcEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTS--SGQIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~--DGrLv   78 (444)
                      |||++|+.|.+...... .      .++..+       ...++..++.+ +..|+..|++|+|++|.||+++.  +|++.
T Consensus       127 ~E~~~gg~L~~~l~~~~-~------~l~~~~-------~~~i~~qi~~a-L~~LH~~givHrDlkp~NIll~~~~~~~vk  191 (387)
T 1kob_A          127 LEFLSGGELFDRIAAED-Y------KMSEAE-------VINYMRQACEG-LKHMHEHSIVHLDIKPENIMCETKKASSVK  191 (387)
T ss_dssp             EECCCCCBHHHHTTCTT-C------CBCHHH-------HHHHHHHHHHH-HHHHHHTTEECCCCCGGGEEESSTTCCCEE
T ss_pred             EEcCCCCcHHHHHHhhc-C------CCCHHH-------HHHHHHHHHHH-HHHHHhCCeeecccchHHeEEecCCCCceE
Confidence            79999999988765321 1      112221       23455555555 88899999999999999999985  47899


Q ss_pred             EEecccccccchh
Q 013370           79 FLDFGLLCRMERK   91 (444)
Q Consensus        79 lLDFGmv~~L~~~   91 (444)
                      ++|||+...++..
T Consensus       192 L~DFG~a~~~~~~  204 (387)
T 1kob_A          192 IIDFGLATKLNPD  204 (387)
T ss_dssp             ECCCTTCEECCTT
T ss_pred             EEecccceecCCC
Confidence            9999999887654

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=98.13  E-value=1.4e-06  Score=82.60  Aligned_cols=77  Identities=25%  Similarity=0.285  Sum_probs=56.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEcc-CCcEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTS-SGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~-DGrLvl   79 (444)
                      |||++|..|.++.....+..     .....       .+..++..++.+ +..+|..|++|+|++|.||+++. +|++.+
T Consensus        98 ~e~~~~~~L~~~l~~~~~~~-----~~~~~-------~~~~~~~qi~~~-l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl  164 (295)
T 2clq_A           98 MEQVPGGSLSALLRSKWGPL-----KDNEQ-------TIGFYTKQILEG-LKYLHDNQIVHRDIKGDNVLINTYSGVLKI  164 (295)
T ss_dssp             EECCSEEEHHHHHHHTTCCC-----TTCHH-------HHHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEEETTTCCEEE
T ss_pred             EEeCCCCCHHHHHHhhccCC-----CccHH-------HHHHHHHHHHHH-HHHHHhCCEEccCCChhhEEEECCCCCEEE
Confidence            79999999999876532211     01111       123445555554 78899999999999999999997 899999


Q ss_pred             Eecccccccch
Q 013370           80 LDFGLLCRMER   90 (444)
Q Consensus        80 LDFGmv~~L~~   90 (444)
                      +|||+...+..
T Consensus       165 ~Dfg~~~~~~~  175 (295)
T 2clq_A          165 SDFGTSKRLAG  175 (295)
T ss_dssp             CCTTTCEESCC
T ss_pred             eecccccccCC
Confidence            99999987754

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=98.12  E-value=1.5e-06  Score=82.73  Aligned_cols=75  Identities=20%  Similarity=0.236  Sum_probs=53.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++| .+.+........      ..+..       ....++..++.+ +..+|..|++|+|++|.||+++.+|++.++
T Consensus        81 ~e~~~~-~L~~~~~~~~~~------~~~~~-------~~~~~~~~i~~~-l~~lH~~~i~H~dlkp~Nili~~~~~~kl~  145 (299)
T 2r3i_A           81 FEFLHQ-DLKKFMDASALT------GIPLP-------LIKSYLFQLLQG-LAFCHSHRVLHRDLKPQNLLINTEGAIKLA  145 (299)
T ss_dssp             EECCSE-EHHHHHHHTTTT------CCCHH-------HHHHHHHHHHHH-HHHHHHTTCCCCCCCGGGEEECTTSCEEEC
T ss_pred             EEcccC-CHHHHHHhhhcc------CCCHH-------HHHHHHHHHHHH-HHHHHHCCccCCCCCHHHeEEcCCCCEEEC
Confidence            688886 666665433100      01111       123455555554 888999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...++.
T Consensus       146 dfg~~~~~~~  155 (299)
T 2r3i_A          146 DFGLARAFGV  155 (299)
T ss_dssp             STTHHHHHCC
T ss_pred             cchhhhhccC
Confidence            9999876543

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=98.12  E-value=1.5e-06  Score=87.44  Aligned_cols=79  Identities=22%  Similarity=0.314  Sum_probs=57.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEE----ccCCc
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRY----TSSGQ   76 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv----~~DGr   76 (444)
                      |||++|+.|.++.......     ..++..       ....++..++.+ +..|+..|++|+|++|.||++    +.++.
T Consensus        88 ~e~~~~g~L~~~l~~~~~~-----~~l~~~-------~~~~i~~qi~~a-L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~  154 (396)
T 4eut_A           88 MEFCPCGSLYTVLEEPSNA-----YGLPES-------EFLIVLRDVVGG-MNHLRENGIVHRNIKPGNIMRVIGEDGQSV  154 (396)
T ss_dssp             ECCCTTEEHHHHTTSGGGT-----TCCCHH-------HHHHHHHHHHHH-HHHHHHTTEECCCCCGGGEEEEECTTSCEE
T ss_pred             EecCCCCCHHHHHHhhhcc-----cCCCHH-------HHHHHHHHHHHH-HHHHHHCCEEECCcCHHHEEEeecCCCcee
Confidence            7999999999887543110     001111       123455555554 889999999999999999999    66678


Q ss_pred             EEEEecccccccchhh
Q 013370           77 IGFLDFGLLCRMERKH   92 (444)
Q Consensus        77 LvlLDFGmv~~L~~~~   92 (444)
                      +.++|||+...++...
T Consensus       155 ~kL~DFG~a~~~~~~~  170 (396)
T 4eut_A          155 YKLTDFGAARELEDDE  170 (396)
T ss_dssp             EEECCGGGCEECCCGG
T ss_pred             EEEecCCCceEccCCC
Confidence            9999999998876543

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=98.12  E-value=1.5e-06  Score=86.10  Aligned_cols=77  Identities=19%  Similarity=0.221  Sum_probs=56.0

Q ss_pred             CCCcCCCCcccHHhhcC--CCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCc--
Q 013370            1 MEWMVGESPTDLISLST--GSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQ--   76 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~--G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGr--   76 (444)
                      |||++|..|.+......  +..      +++.       ....++..++.+ +..+|..|++|+|++|.||+++.+|.  
T Consensus       105 ~e~~~g~~L~~~l~~~~~~~~~------~~~~-------~~~~i~~qi~~a-l~~lH~~~ivHrDlkp~NIl~~~~~~~~  170 (351)
T 3c0i_A          105 FEFMDGADLCFEIVKRADAGFV------YSEA-------VASHYMRQILEA-LRYCHDNNIIHRDVKPHCVLLASKENSA  170 (351)
T ss_dssp             EECCSSCBHHHHHHHHHHTTCC------CCHH-------HHHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEECSSSTTC
T ss_pred             EeCCCCCCHHHHHHHhcccCCC------CCHH-------HHHHHHHHHHHH-HHHHHHCCceeccCChHHeEEecCCCCC
Confidence            79999999987654321  111      1111       123455555555 88899999999999999999987664  


Q ss_pred             -EEEEecccccccchh
Q 013370           77 -IGFLDFGLLCRMERK   91 (444)
Q Consensus        77 -LvlLDFGmv~~L~~~   91 (444)
                       +.++|||+...+...
T Consensus       171 ~vkl~Dfg~a~~~~~~  186 (351)
T 3c0i_A          171 PVKLGGFGVAIQLGES  186 (351)
T ss_dssp             CEEECCCTTCEECCTT
T ss_pred             cEEEecCcceeEecCC
Confidence             999999999887653

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=98.11  E-value=8.5e-07  Score=83.84  Aligned_cols=51  Identities=25%  Similarity=0.382  Sum_probs=36.5

Q ss_pred             HHHHHHHHHHHHHHHHHc-CccccCCCCCCeEEccCCcEEEEecccccccchh
Q 013370           40 LDLVNKGVEATLVQLLET-GILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~-GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~   91 (444)
                      ..++..++.+ +..+|.. |++|+|++|.||+++.+|++.++|||+...+...
T Consensus       112 ~~i~~qi~~~-l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  163 (290)
T 3fme_A          112 GKIAVSIVKA-LEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDD  163 (290)
T ss_dssp             HHHHHHHHHH-HHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC---------
T ss_pred             HHHHHHHHHH-HHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCccccccc
Confidence            3455555555 8889998 9999999999999999999999999998877554

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=98.11  E-value=2.7e-06  Score=82.63  Aligned_cols=48  Identities=31%  Similarity=0.364  Sum_probs=41.3

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccc
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME   89 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~   89 (444)
                      .++..++.+ +..|+..|++|+|++|.||+++.+|++.++|||+...+.
T Consensus       112 ~~~~qi~~a-L~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~  159 (317)
T 2pmi_A          112 YFQWQLLQG-LAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG  159 (317)
T ss_dssp             HHHHHHHHH-HHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred             HHHHHHHHH-HHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence            445555554 788999999999999999999999999999999988764

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=98.10  E-value=1.9e-06  Score=89.92  Aligned_cols=76  Identities=18%  Similarity=0.144  Sum_probs=57.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.++.....+..      .+..       .+..++..++.+ +..|+..|++|+|++|.||+++.+|.+.++
T Consensus       295 ~E~~~~g~L~~~l~~~~~~~------~~~~-------~~~~i~~qi~~~-L~~LH~~~ivHrDlkp~NIll~~~~~~kl~  360 (495)
T 1opk_A          295 TEFMTYGNLLDYLRECNRQE------VSAV-------VLLYMATQISSA-MEYLEKKNFIHRNLAARNCLVGENHLVKVA  360 (495)
T ss_dssp             EECCTTCBHHHHHHHSCTTT------SCHH-------HHHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEECGGGCEEEC
T ss_pred             EEccCCCCHHHHHHhcCcCC------CCHH-------HHHHHHHHHHHH-HHHHHhCCcccCCCChhhEEECCCCcEEEe
Confidence            79999999999876432111      1111       123455555554 888999999999999999999999999999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...+..
T Consensus       361 DFG~a~~~~~  370 (495)
T 1opk_A          361 DFGLSRLMTG  370 (495)
T ss_dssp             CTTCEECCTT
T ss_pred             ecccceeccC
Confidence            9999887654

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=98.09  E-value=2.3e-06  Score=81.61  Aligned_cols=49  Identities=27%  Similarity=0.438  Sum_probs=42.3

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      .++..++.+ +..+|..|++|+|++|.||+++.+|++.+.|||....+.+
T Consensus       113 ~~~~qi~~a-l~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~  161 (305)
T 2wtk_C          113 GYFCQLIDG-LEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHP  161 (305)
T ss_dssp             HHHHHHHHH-HHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred             HHHHHHHHH-HHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCc
Confidence            455555555 8889999999999999999999999999999999987653

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=98.09  E-value=3.4e-06  Score=79.32  Aligned_cols=35  Identities=23%  Similarity=0.285  Sum_probs=29.1

Q ss_pred             cCccccCCCCCCeEEccCCcEEEEecccccccchh
Q 013370           57 TGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        57 ~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~   91 (444)
                      .+++|+|+|||||++++++.+++|||+.++.-++.
T Consensus       183 ~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~gd~~  217 (263)
T 3tm0_A          183 LVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRADKW  217 (263)
T ss_dssp             EEEECSSCCTTSEEEETTEEEEECCCTTCEEEEHH
T ss_pred             ceEECCCCCcCcEEEECCcEEEEEEchhcccCCHH
Confidence            56999999999999976545569999998877664

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=98.09  E-value=1.5e-06  Score=91.56  Aligned_cols=77  Identities=21%  Similarity=0.224  Sum_probs=58.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+++....+..      ++..       .+..++..++.+ +..|+..|++|+|++|.||+++.+|.+.++
T Consensus       340 ~e~~~~gsL~~~l~~~~~~~------l~~~-------~~~~i~~qi~~~-L~~LH~~~ivHrDlkp~NIll~~~~~~kl~  405 (535)
T 2h8h_A          340 TEYMSKGSLLDFLKGETGKY------LRLP-------QLVDMAAQIASG-MAYVERMNYVHRDLRAANILVGENLVCKVA  405 (535)
T ss_dssp             ECCCTTEEHHHHHSHHHHTT------CCHH-------HHHHHHHHHHHH-HHHHHHTTCCCSCCSGGGEEECGGGCEEEC
T ss_pred             eehhcCCcHHHHHhhcCCCC------CCHH-------HHHHHHHHHHHH-HHHHHhCCeeCCCCCHhhEEEcCCCcEEEc
Confidence            79999999999875321110      1111       233555555555 788999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...+...
T Consensus       406 DFG~a~~~~~~  416 (535)
T 2h8h_A          406 DFGLARLIEDN  416 (535)
T ss_dssp             CTTSTTTCCCH
T ss_pred             ccccceecCCC
Confidence            99999887653

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=98.09  E-value=2e-06  Score=84.57  Aligned_cols=49  Identities=29%  Similarity=0.390  Sum_probs=42.1

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      .++..++.+ +..+|..|++|+|++|.||+++.+|++.++|||+...+..
T Consensus       116 ~~~~qi~~~-l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~  164 (346)
T 1ua2_A          116 AYMLMTLQG-LEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGS  164 (346)
T ss_dssp             HHHHHHHHH-HHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTS
T ss_pred             HHHHHHHHH-HHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccC
Confidence            455555554 8889999999999999999999999999999999987653

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=98.08  E-value=2.3e-06  Score=85.04  Aligned_cols=50  Identities=22%  Similarity=0.393  Sum_probs=42.5

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchh
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~   91 (444)
                      .++..++.+ +..++..|++|+|++|.||+++.+|++.++|||+...+++.
T Consensus       158 ~i~~qi~~a-L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~  207 (348)
T 1u5q_A          158 AVTHGALQG-LAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA  207 (348)
T ss_dssp             HHHHHHHHH-HHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB
T ss_pred             HHHHHHHHH-HHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC
Confidence            455555544 88899999999999999999999999999999998877643

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=98.07  E-value=2e-06  Score=82.65  Aligned_cols=75  Identities=17%  Similarity=0.218  Sum_probs=56.1

Q ss_pred             CCC-cCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEc-cCCcEE
Q 013370            1 MEW-MVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYT-SSGQIG   78 (444)
Q Consensus         1 MEw-IdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~-~DGrLv   78 (444)
                      ||| ++|..|.++.......+        ..       ....++..++.+ +..+|..|++|+|++|.||+++ .+|++.
T Consensus       117 ~e~~~~~~~L~~~l~~~~~~~--------~~-------~~~~~~~qi~~~-l~~lH~~~i~H~dlkp~Nil~~~~~~~~k  180 (312)
T 2iwi_A          117 LERPLPAQDLFDYITEKGPLG--------EG-------PSRCFFGQVVAA-IQHCHSRGVVHRDIKDENILIDLRRGCAK  180 (312)
T ss_dssp             EECCSSEEEHHHHHHHHCSCC--------HH-------HHHHHHHHHHHH-HHHHHHHTEECCCCSGGGEEEETTTTEEE
T ss_pred             EEecCCCCCHHHHHHhcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCeeecCCChhhEEEeCCCCeEE
Confidence            566 78888888765432221        11       123556666555 8889999999999999999999 889999


Q ss_pred             EEecccccccchh
Q 013370           79 FLDFGLLCRMERK   91 (444)
Q Consensus        79 lLDFGmv~~L~~~   91 (444)
                      ++|||+...+...
T Consensus       181 l~dfg~~~~~~~~  193 (312)
T 2iwi_A          181 LIDFGSGALLHDE  193 (312)
T ss_dssp             ECCCSSCEECCSS
T ss_pred             EEEcchhhhcccC
Confidence            9999998877653

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=98.05  E-value=2.7e-06  Score=84.21  Aligned_cols=96  Identities=17%  Similarity=0.215  Sum_probs=60.3

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhhHHhH-HHHHHHHHhCCHHHHHHHHHhc
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAM-LASIVHIVNGDWQSLVHSLTEM  118 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l-~~ll~alv~~D~~~la~~l~~l  118 (444)
                      ..++..++.+ +..|+..|++|+|++|.||+++.+|++.++|||+....++.....- ....  .....| ...+.+..-
T Consensus       131 ~~i~~qi~~a-L~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~--~gt~~y-~aPE~~~~~  206 (364)
T 3qyz_A          131 CYFLYQILRG-LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY--VATRWY-RAPEIMLNS  206 (364)
T ss_dssp             HHHHHHHHHH-HHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCC--CSCGGG-CCHHHHHTB
T ss_pred             HHHHHHHHHH-HHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCCCcccccccc--ccccCC-CCCHHhcCC
Confidence            3455565555 8889999999999999999999999999999999987765422110 0000  000001 123333333


Q ss_pred             CCCCCCCChHHHHHHHHHHHh
Q 013370          119 DVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus       119 G~l~~~~d~~~~~~~L~~~l~  139 (444)
                      ...++..|++.+.--+..++.
T Consensus       207 ~~~~~~~DiwslG~il~ell~  227 (364)
T 3qyz_A          207 KGYTKSIDIWSVGCILAEMLS  227 (364)
T ss_dssp             CSCSTHHHHHHHHHHHHHHHH
T ss_pred             CCCCcchhHHHHHHHHHHHHH
Confidence            334455677777666665554

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.05  E-value=3.7e-06  Score=77.80  Aligned_cols=35  Identities=26%  Similarity=0.334  Sum_probs=29.3

Q ss_pred             CccccCCCCCCeEEccCCcEEEEecccccccchhh
Q 013370           58 GILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKH   92 (444)
Q Consensus        58 GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~   92 (444)
                      +++|+|+||+||++++++.+++||||.++.-++..
T Consensus       185 ~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g~~~~  219 (264)
T 1nd4_A          185 VVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQ  219 (264)
T ss_dssp             EEECSSCCGGGEEEETTEEEEECCCTTCEEEETHH
T ss_pred             EEECCCCCCCcEEEECCcEEEEEcchhcccCChHH
Confidence            49999999999999765555699999998877653

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=98.03  E-value=5.4e-06  Score=81.39  Aligned_cols=115  Identities=16%  Similarity=0.149  Sum_probs=70.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEcc-------
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTS-------   73 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~-------   73 (444)
                      |||+ |..|.++........      ++..       ....++..++.+ +..|+..|++|+|++|.||+++.       
T Consensus       115 ~e~~-~~~L~~~~~~~~~~~------~~~~-------~~~~i~~qi~~a-L~~LH~~~ivHrDlkp~NIll~~~~~~~~~  179 (360)
T 3llt_A          115 FEPL-GPSLYEIITRNNYNG------FHIE-------DIKLYCIEILKA-LNYLRKMSLTHTDLKPENILLDDPYFEKSL  179 (360)
T ss_dssp             ECCC-CCBHHHHHHHTTTCC------CCHH-------HHHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEESCTTCCEEE
T ss_pred             EcCC-CCCHHHHHHhcCCCC------CCHH-------HHHHHHHHHHHH-HHHHHHCCeeeCCCCcccEEEccccccccc
Confidence            7899 888888876432100      1111       123455555555 88899999999999999999975       


Q ss_pred             ------------------CCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHH
Q 013370           74 ------------------SGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLE  135 (444)
Q Consensus        74 ------------------DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~  135 (444)
                                        +|.+.++|||+....+...... ..      ...| ...+.+... -..+..|++.+.--+.
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~-~g------t~~y-~aPE~~~~~-~~~~~~DiwslG~il~  250 (360)
T 3llt_A          180 ITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSI-IN------TRQY-RAPEVILNL-GWDVSSDMWSFGCVLA  250 (360)
T ss_dssp             EEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSC-CS------CGGG-CCHHHHTTC-CCCTTHHHHHHHHHHH
T ss_pred             cchhcccccccccccccCCCCEEEEeccCceecCCCCcCc-cC------cccc-cCcHHHcCC-CCCCccchHHHHHHHH
Confidence                              7899999999987655432110 00      0111 123333332 2345567777665555


Q ss_pred             HHHh
Q 013370          136 DALG  139 (444)
Q Consensus       136 ~~l~  139 (444)
                      .++.
T Consensus       251 ell~  254 (360)
T 3llt_A          251 ELYT  254 (360)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5543

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=98.03  E-value=4.5e-06  Score=80.13  Aligned_cols=75  Identities=19%  Similarity=0.235  Sum_probs=54.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEcc-------
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTS-------   73 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~-------   73 (444)
                      |||+ |..+.+........+      ++..       ....++..++.+ +..+|..|++|+|++|.||+++.       
T Consensus        96 ~e~~-~~~l~~~l~~~~~~~------~~~~-------~~~~~~~qi~~~-l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~  160 (339)
T 1z57_A           96 FELL-GLSTYDFIKENGFLP------FRLD-------HIRKMAYQICKS-VNFLHSNKLTHTDLKPENILFVQSDYTEAY  160 (339)
T ss_dssp             EECC-CCBHHHHHHHTTTCC------CCHH-------HHHHHHHHHHHH-HHHHHHTTEECCCCCGGGEEESCCCEEEEE
T ss_pred             EcCC-CCCHHHHHHhcCCCC------CcHH-------HHHHHHHHHHHH-HHHHHHCCCcCCCCCHHHEEEecccccccc
Confidence            7899 777777765432111      1111       123556666655 88899999999999999999987       


Q ss_pred             ------------CCcEEEEecccccccch
Q 013370           74 ------------SGQIGFLDFGLLCRMER   90 (444)
Q Consensus        74 ------------DGrLvlLDFGmv~~L~~   90 (444)
                                  +|++.++|||+....++
T Consensus       161 ~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~  189 (339)
T 1z57_A          161 NPKIKRDERTLINPDIKVVDFGSATYDDE  189 (339)
T ss_dssp             C----CEEEEESCCCEEECCCSSCEETTS
T ss_pred             CCccccccccccCCCceEeeCcccccCcc
Confidence                        67899999999876554

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=98.00  E-value=4.7e-06  Score=86.36  Aligned_cols=91  Identities=19%  Similarity=0.274  Sum_probs=58.4

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCC
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDV  120 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~  120 (444)
                      .++..++.+ +..+|..|++|+|++|+||+++.+|++.++|||+...........  .   ......| ...+.+...+ 
T Consensus       168 ~~~~qil~a-L~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~--~---~~gt~~y-~aPE~~~~~~-  239 (464)
T 3ttj_A          168 YLLYQMLCG-IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMT--P---YVVTRYY-RAPEVILGMG-  239 (464)
T ss_dssp             HHHHHHHHH-HHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-----CCCC---------CCCTT-CCHHHHTTCC-
T ss_pred             HHHHHHHHH-HHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCCcccC--C---Ccccccc-cCHHHHcCCC-
Confidence            455666555 889999999999999999999999999999999998765432110  0   0111222 2355555443 


Q ss_pred             CCCCCChHHHHHHHHHHHh
Q 013370          121 VRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus       121 l~~~~d~~~~~~~L~~~l~  139 (444)
                      ..+..|++.+.--+..++.
T Consensus       240 ~~~~~DiwSlG~il~ell~  258 (464)
T 3ttj_A          240 YKENVDIWSVGCIMGEMVR  258 (464)
T ss_dssp             CCTTHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHh
Confidence            3356788887766666664

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=98.00  E-value=2.6e-06  Score=81.32  Aligned_cols=49  Identities=24%  Similarity=0.303  Sum_probs=40.2

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEc-cCCcEEEEecccccccch
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYT-SSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~-~DGrLvlLDFGmv~~L~~   90 (444)
                      .++..++.+ +..+|..|++|+|++|.||+++ .++.+.++|||+...+++
T Consensus       124 ~~~~qi~~~-l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~  173 (320)
T 2i6l_A          124 LFMYQLLRG-LKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDP  173 (320)
T ss_dssp             HHHHHHHHH-HHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC--
T ss_pred             HHHHHHHHH-HHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCccccccCC
Confidence            455555554 8889999999999999999997 567999999999987754

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=97.99  E-value=5.4e-06  Score=82.52  Aligned_cols=49  Identities=29%  Similarity=0.422  Sum_probs=38.1

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      .++..++.+ +..|+..|++|+|++|.||+++.+|++.++|||+....+.
T Consensus       131 ~i~~qi~~a-l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~  179 (371)
T 2xrw_A          131 YLLYQMLCG-IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT  179 (371)
T ss_dssp             HHHHHHHHH-HHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC------
T ss_pred             HHHHHHHHH-HHHHHHCCeecccCCHHHEEEcCCCCEEEEEeeccccccc
Confidence            455555554 7889999999999999999999999999999999887654

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=97.99  E-value=4.8e-06  Score=80.65  Aligned_cols=50  Identities=32%  Similarity=0.487  Sum_probs=40.0

Q ss_pred             HHHHHHHHHHHHHHHHc-CccccCCCCCCeEEccCCcEEEEecccccccchh
Q 013370           41 DLVNKGVEATLVQLLET-GILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~-GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~   91 (444)
                      .++..++.+ +..++.. |++|+|++|.||+++.+|++.++|||+...+...
T Consensus       129 ~i~~~i~~~-l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~  179 (327)
T 3aln_A          129 KITLATVKA-LNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS  179 (327)
T ss_dssp             HHHHHHHHH-HHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC----
T ss_pred             HHHHHHHHH-HHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceecccc
Confidence            455555554 7888998 9999999999999999999999999999877654

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=97.99  E-value=5.5e-06  Score=81.35  Aligned_cols=74  Identities=20%  Similarity=0.325  Sum_probs=51.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      ||+ .|..|.++.......+        ..+       ...++..++.+ +..+|..|++|+|++|.||+++ +|.+.++
T Consensus        88 ~e~-~~~~L~~~l~~~~~~~--------~~~-------~~~i~~qi~~a-l~~lH~~~iiHrDikp~NIll~-~~~~kl~  149 (343)
T 3dbq_A           88 MEC-GNIDLNSWLKKKKSID--------PWE-------RKSYWKNMLEA-VHTIHQHGIVHSDLKPANFLIV-DGMLKLI  149 (343)
T ss_dssp             ECC-CSEEHHHHHHHSCCCC--------HHH-------HHHHHHHHHHH-HHHHHHTTCCCCCCCGGGEEEE-TTEEEEC
T ss_pred             EeC-CCCCHHHHHHhcCCCC--------HHH-------HHHHHHHHHHH-HHHHHhCCeecCCCCcceEEEE-CCcEEEe
Confidence            674 4667777765432222        111       23455555555 8889999999999999999996 7999999


Q ss_pred             ecccccccchhh
Q 013370           81 DFGLLCRMERKH   92 (444)
Q Consensus        81 DFGmv~~L~~~~   92 (444)
                      |||+...+.+..
T Consensus       150 DFG~a~~~~~~~  161 (343)
T 3dbq_A          150 DFGIANQMQPDT  161 (343)
T ss_dssp             CCSSSCCC----
T ss_pred             ecccccccCccc
Confidence            999998876543

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=97.98  E-value=4.9e-06  Score=80.92  Aligned_cols=75  Identities=19%  Similarity=0.256  Sum_probs=54.1

Q ss_pred             CCCcCC-CCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEc-cCCcEE
Q 013370            1 MEWMVG-ESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYT-SSGQIG   78 (444)
Q Consensus         1 MEwIdG-~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~-~DGrLv   78 (444)
                      |||++| ..|.+.......++        .+       ....++..++.+ +..|+..|++|+|++|.||+++ .+|++.
T Consensus       127 ~e~~~~~~~L~~~l~~~~~l~--------~~-------~~~~i~~qi~~~-L~~LH~~~ivH~Dlkp~NIll~~~~~~~k  190 (320)
T 3a99_A          127 LERPEPVQDLFDFITERGALQ--------EE-------LARSFFWQVLEA-VRHCHNCGVLHRDIKDENILIDLNRGELK  190 (320)
T ss_dssp             EECCSSEEEHHHHHHHHCSCC--------HH-------HHHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEEETTTTEEE
T ss_pred             EEcCCCCccHHHHHhccCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCcEeCCCCHHHEEEeCCCCCEE
Confidence            577765 67777655332221        11       123455555555 7889999999999999999999 789999


Q ss_pred             EEecccccccchh
Q 013370           79 FLDFGLLCRMERK   91 (444)
Q Consensus        79 lLDFGmv~~L~~~   91 (444)
                      ++|||+...+...
T Consensus       191 L~Dfg~~~~~~~~  203 (320)
T 3a99_A          191 LIDFGSGALLKDT  203 (320)
T ss_dssp             ECCCTTCEECCSS
T ss_pred             EeeCccccccccc
Confidence            9999998877643

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=97.98  E-value=5e-06  Score=81.98  Aligned_cols=35  Identities=20%  Similarity=0.340  Sum_probs=29.1

Q ss_pred             HHHHHHHHHHHHHHHHHc-CccccCCCCCCeEEccCC
Q 013370           40 LDLVNKGVEATLVQLLET-GILHADPHPGNLRYTSSG   75 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~-GfFHADPHPGNILv~~DG   75 (444)
                      ..++..++.+ +..||.. |++|+|++|.||+++.+|
T Consensus       149 ~~i~~qi~~a-L~~lH~~~givHrDikp~NIll~~~~  184 (397)
T 1wak_A          149 KKIIQQVLQG-LDYLHTKCRIIHTDIKPENILLSVNE  184 (397)
T ss_dssp             HHHHHHHHHH-HHHHHHTTCEECCCCSGGGEEECCCH
T ss_pred             HHHHHHHHHH-HHHHHHhCCEecCCCCHHHeeEeccc
Confidence            3566666655 7889998 999999999999999876

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=97.97  E-value=4.7e-06  Score=90.18  Aligned_cols=71  Identities=23%  Similarity=0.315  Sum_probs=51.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.+....  .        ++..+       ...++..++.+ +..+|..|++|+|++|.||+++.+ ++.++
T Consensus       163 ~E~~~g~~L~~~~~~--~--------l~~~~-------~~~~~~qi~~a-L~~lH~~giiHrDlkp~NIll~~~-~~kl~  223 (681)
T 2pzi_A          163 MEYVGGQSLKRSKGQ--K--------LPVAE-------AIAYLLEILPA-LSYLHSIGLVYNDLKPENIMLTEE-QLKLI  223 (681)
T ss_dssp             EECCCCEECC----C--C--------CCHHH-------HHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEECSS-CEEEC
T ss_pred             EEeCCCCcHHHHHhC--C--------CCHHH-------HHHHHHHHHHH-HHHHHHCCCeecccChHHeEEeCC-cEEEE
Confidence            799999999876431  1        12222       23455555554 888999999999999999999875 99999


Q ss_pred             ecccccccch
Q 013370           81 DFGLLCRMER   90 (444)
Q Consensus        81 DFGmv~~L~~   90 (444)
                      |||+...++.
T Consensus       224 DFG~a~~~~~  233 (681)
T 2pzi_A          224 DLGAVSRINS  233 (681)
T ss_dssp             CCTTCEETTC
T ss_pred             ecccchhccc
Confidence            9999876543

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=97.96  E-value=1.9e-05  Score=78.55  Aligned_cols=109  Identities=18%  Similarity=0.208  Sum_probs=64.3

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcC
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMD  119 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG  119 (444)
                      ..++..++.+ +..|+..|++|+|++|.||+++.+|++.++|||+....+...... .      ....| ...+.+....
T Consensus       147 ~~i~~qi~~a-L~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~-~------~t~~y-~aPE~~~~~~  217 (371)
T 4exu_A          147 QYLVYQMLKG-LKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGY-V------VTRWY-RAPEVILSWM  217 (371)
T ss_dssp             HHHHHHHHHH-HHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC--------CT-T------CCCTT-SCHHHHSCCS
T ss_pred             HHHHHHHHHH-HHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCcccccccCcCCc-c------cCccc-cCHHHhcCCC
Confidence            3455555555 889999999999999999999999999999999998665432111 0      01112 2244444333


Q ss_pred             CCCCCCChHHHHHHHHHHHhchhccCCCCcccHHHHHHHHH
Q 013370          120 VVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIW  160 (444)
Q Consensus       120 ~l~~~~d~~~~~~~L~~~l~~~~~~~~l~~~~f~~ll~~l~  160 (444)
                      ...+..|+..+.--+..++...   .+....+..+.+..+.
T Consensus       218 ~~~~~~DiwslG~il~el~~g~---~pf~~~~~~~~~~~i~  255 (371)
T 4exu_A          218 HYNQTVDIWSVGCIMAEMLTGK---TLFKGKDYLDQLTQIL  255 (371)
T ss_dssp             CCCTTHHHHHHHHHHHHHHHSS---CSCCCSSHHHHHHHHH
T ss_pred             CCCcHHhHHHHHHHHHHHHhCC---CCCCCCChHHHHHHHH
Confidence            4455677887776666665431   2333344444444433

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=97.95  E-value=3.2e-06  Score=82.72  Aligned_cols=92  Identities=12%  Similarity=0.139  Sum_probs=58.0

Q ss_pred             HHHHHHHHHHHHHHH--HcCccccCCCCCCeEEcc-CCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHh
Q 013370           41 DLVNKGVEATLVQLL--ETGILHADPHPGNLRYTS-SGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTE  117 (444)
Q Consensus        41 ~La~~gv~a~L~QLl--~~GfFHADPHPGNILv~~-DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~  117 (444)
                      .++..++.+ +..+|  ..|++|+|++|.||+++. +|++.++|||+...++......-.     .....| ...+.+..
T Consensus       133 ~~~~qi~~a-l~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~~~~~~-----~gt~~y-~aPE~~~~  205 (360)
T 3e3p_A          133 VFLFQLIRS-IGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAY-----ICSRYY-RAPELIFG  205 (360)
T ss_dssp             HHHHHHHHH-HHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTSCCCST-----TSCGGG-CCHHHHTT
T ss_pred             HHHHHHHHH-HHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCCCcccc-----cCCcce-eCHHHHcC
Confidence            344444444 67788  899999999999999997 899999999999887654321100     000011 12344433


Q ss_pred             cCCCCCCCChHHHHHHHHHHHh
Q 013370          118 MDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus       118 lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      -....+..|++.+.--+..++.
T Consensus       206 ~~~~~~~~Di~slG~il~ell~  227 (360)
T 3e3p_A          206 NQHYTTAVDIWSVGCIFAEMML  227 (360)
T ss_dssp             CSSCCTHHHHHHHHHHHHHHHH
T ss_pred             CCCCCcHHHHHHHHHHHHHHHh
Confidence            3334455677777666655554

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=97.95  E-value=3.9e-06  Score=80.67  Aligned_cols=52  Identities=23%  Similarity=0.361  Sum_probs=44.6

Q ss_pred             HHHHHHHHHHHHHHHHHcC--ccccCCCCCCeEEccCCcEEEEecccccccchhh
Q 013370           40 LDLVNKGVEATLVQLLETG--ILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKH   92 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~G--fFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~   92 (444)
                      ..++..++.+ +..||..|  ++|+|++|.||+++.+|++.++|||+...++...
T Consensus       139 ~~i~~qi~~~-l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~  192 (337)
T 3ll6_A          139 LKIFYQTCRA-VQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYP  192 (337)
T ss_dssp             HHHHHHHHHH-HHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC
T ss_pred             HHHHHHHHHH-HHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccceeccccC
Confidence            3566666555 88899999  9999999999999999999999999998887643

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=97.93  E-value=7.2e-06  Score=79.40  Aligned_cols=50  Identities=24%  Similarity=0.286  Sum_probs=41.4

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEE-------------------ccCCcEEEEecccccccch
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRY-------------------TSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv-------------------~~DGrLvlLDFGmv~~L~~   90 (444)
                      ..++..++.+ +..||..|++|+|++|.||++                   ..+|++.++|||+......
T Consensus       126 ~~i~~qi~~~-L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~  194 (355)
T 2eu9_A          126 RHMAYQLCHA-LRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHE  194 (355)
T ss_dssp             HHHHHHHHHH-HHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTS
T ss_pred             HHHHHHHHHH-HHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCccccccc
Confidence            3556666555 888999999999999999999                   5678999999999876544

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=97.92  E-value=3.6e-06  Score=86.12  Aligned_cols=81  Identities=21%  Similarity=0.289  Sum_probs=53.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCC-----
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG-----   75 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DG-----   75 (444)
                      |||++| +|.++.......+ .... ...  ..    ....++..++.+ +..||..|++|+|++|.||+++.+|     
T Consensus        88 ~E~~~g-sL~~~l~~~~~~~-~~~~-~~~--~~----~~~~i~~qi~~a-L~~LH~~~ivHrDLkp~NILl~~~~~~~~~  157 (434)
T 2rio_A           88 LELCNL-NLQDLVESKNVSD-ENLK-LQK--EY----NPISLLRQIASG-VAHLHSLKIIHRDLKPQNILVSTSSRFTAD  157 (434)
T ss_dssp             ECCCSE-EHHHHHHTC----------------C----CHHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEEECCHHHHSC
T ss_pred             EecCCC-CHHHHHhccCCCc-hhhh-hcc--ch----hHHHHHHHHHHH-HHHHHHCCccccCCChHhEEEecCcccccc
Confidence            799976 7888775431110 0000 000  00    112455555555 8889999999999999999997654     


Q ss_pred             --------cEEEEecccccccchh
Q 013370           76 --------QIGFLDFGLLCRMERK   91 (444)
Q Consensus        76 --------rLvlLDFGmv~~L~~~   91 (444)
                              ++.+.|||+...++..
T Consensus       158 ~~~~~~~~~~kL~DFG~a~~~~~~  181 (434)
T 2rio_A          158 QQTGAENLRILISDFGLCKKLDSG  181 (434)
T ss_dssp             CTTCCCSCEEEECCCTTCEECCC-
T ss_pred             cccCCCceEEEEcccccceecCCC
Confidence                    8999999999988764

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=97.89  E-value=1.1e-05  Score=82.36  Aligned_cols=50  Identities=26%  Similarity=0.471  Sum_probs=41.8

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCc--EEEEecccccccch
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQ--IGFLDFGLLCRMER   90 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGr--LvlLDFGmv~~L~~   90 (444)
                      ..++..++.+ +..|+..|++|+|++|.||+++.+|.  +.++|||+......
T Consensus       203 ~~i~~qi~~a-L~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~  254 (429)
T 3kvw_A          203 RKFAHSILQC-LDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ  254 (429)
T ss_dssp             HHHHHHHHHH-HHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTC
T ss_pred             HHHHHHHHHH-HHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecCC
Confidence            3555555555 88899999999999999999999987  99999999866543

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=97.87  E-value=9.1e-06  Score=77.76  Aligned_cols=50  Identities=34%  Similarity=0.527  Sum_probs=38.0

Q ss_pred             HHHHHHHHHHHHHHHH-cCccccCCCCCCeEEccCCcEEEEecccccccchh
Q 013370           41 DLVNKGVEATLVQLLE-TGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~-~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~   91 (444)
                      .++..++.+ +..+|. +|++|+|++|.||+++.+|++.++|||+...+...
T Consensus       128 ~~~~~i~~~-l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~  178 (318)
T 2dyl_A          128 KMTVAIVKA-LYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD  178 (318)
T ss_dssp             HHHHHHHHH-HHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred             HHHHHHHHH-HHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCC
Confidence            455555554 788888 59999999999999999999999999998776553

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=97.84  E-value=1.2e-05  Score=74.75  Aligned_cols=75  Identities=9%  Similarity=0.001  Sum_probs=54.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcC--ccccCCCCCCeEEccCCcEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETG--ILHADPHPGNLRYTSSGQIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~G--fFHADPHPGNILv~~DGrLv   78 (444)
                      |||++|++|.++.....+.+      ++..+       ...++..++.+ +..+|..|  ++|+|++|.||+++.+|.+.
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~------~~~~~-------~~~i~~qi~~~-l~~lH~~~~~i~H~dikp~Nil~~~~~~~~  153 (271)
T 3kmu_A           88 THWMPYGSLYNVLHEGTNFV------VDQSQ-------AVKFALDMARG-MAFLHTLEPLIPRHALNSRSVMIDEDMTAR  153 (271)
T ss_dssp             EECCTTCBHHHHHHSCSSCC------CCHHH-------HHHHHHHHHHH-HHHHTTSSSCCTTCCCSGGGEEECTTSCEE
T ss_pred             ecccCCCcHHHHHhhcccCC------CCHHH-------HHHHHHHHHHH-HHHHhcCCCceecCCCccceEEEcCCccee
Confidence            79999999999886432211      11222       23455555555 78889999  99999999999999999888


Q ss_pred             EEecccccccc
Q 013370           79 FLDFGLLCRME   89 (444)
Q Consensus        79 lLDFGmv~~L~   89 (444)
                      +.|||......
T Consensus       154 l~~~~~~~~~~  164 (271)
T 3kmu_A          154 ISMADVKFSFQ  164 (271)
T ss_dssp             EEGGGSCCTTS
T ss_pred             EEeccceeeec
Confidence            88777755433

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=97.83  E-value=1.2e-05  Score=80.96  Aligned_cols=49  Identities=27%  Similarity=0.526  Sum_probs=39.6

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchh
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~   91 (444)
                      .++..++.+ +..+|..|++|+|++|.||+++ +|.+.++|||+...+.+.
T Consensus       159 ~i~~qi~~a-L~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~  207 (390)
T 2zmd_A          159 SYWKNMLEA-VHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD  207 (390)
T ss_dssp             HHHHHHHHH-HHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC---
T ss_pred             HHHHHHHHH-HHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccccCC
Confidence            455555555 8889999999999999999994 699999999999887654

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=97.83  E-value=1.5e-05  Score=87.18  Aligned_cols=77  Identities=21%  Similarity=0.286  Sum_probs=56.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCc---E
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQ---I   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGr---L   77 (444)
                      |||++|++|.++........     .++...       ...++..++.+ +..+|..|++|+|++|+||+++.+|.   +
T Consensus        97 mEy~~ggsL~~~L~~~~~~~-----~lse~~-------i~~I~~QLl~a-L~yLHs~gIVHrDLKP~NILl~~~g~~~~v  163 (676)
T 3qa8_A           97 MEYCEGGDLRKYLNQFENCC-----GLKEGP-------IRTLLSDISSA-LRYLHENRIIHRDLKPENIVLQPGPQRLIH  163 (676)
T ss_dssp             EECCSSCBHHHHHHSSSCTT-----CCCSSH-------HHHHHHHHHHH-HHHHHHTTBCCCCCCSTTEEEECCSSSCEE
T ss_pred             EEeCCCCCHHHHHHhcccCC-----CCCHHH-------HHHHHHHHHHH-HHHHHHCCCccCCCCHHHeEeecCCCceeE
Confidence            79999999999876432100     011111       23455555554 88899999999999999999998875   8


Q ss_pred             EEEecccccccch
Q 013370           78 GFLDFGLLCRMER   90 (444)
Q Consensus        78 vlLDFGmv~~L~~   90 (444)
                      .++|||....++.
T Consensus       164 KL~DFG~a~~~~~  176 (676)
T 3qa8_A          164 KIIDLGYAKELDQ  176 (676)
T ss_dssp             EECSCCCCCBTTS
T ss_pred             EEccccccccccc
Confidence            8999999877543

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=97.82  E-value=1.6e-05  Score=76.41  Aligned_cols=50  Identities=26%  Similarity=0.513  Sum_probs=39.0

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhh
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKH   92 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~   92 (444)
                      .++..++++ +..++..|++|+|++|.||+++ +|++.++|||+...+.+..
T Consensus       131 ~i~~qi~~a-L~~LH~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~  180 (313)
T 3cek_A          131 SYWKNMLEA-VHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT  180 (313)
T ss_dssp             HHHHHHHHH-HHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCC-----
T ss_pred             HHHHHHHHH-HHHHHHCCceecCCCcccEEEE-CCeEEEeeccccccccCcc
Confidence            455555555 7889999999999999999995 6999999999998876543

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=97.80  E-value=1.4e-05  Score=78.34  Aligned_cols=76  Identities=22%  Similarity=0.248  Sum_probs=53.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHc-CccccCCCCCCeEEccC-----
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLET-GILHADPHPGNLRYTSS-----   74 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~-GfFHADPHPGNILv~~D-----   74 (444)
                      |||+ |..|.++.....+..      ++..       ....++..++.+ +..||.. |++|+|++|.||+++.+     
T Consensus       109 ~e~~-~~~L~~~~~~~~~~~------~~~~-------~~~~i~~qi~~a-L~~lH~~~~ivH~Dikp~NIll~~~~~~~~  173 (373)
T 1q8y_A          109 FEVL-GENLLALIKKYEHRG------IPLI-------YVKQISKQLLLG-LDYMHRRCGIIHTDIKPENVLMEIVDSPEN  173 (373)
T ss_dssp             ECCC-CEEHHHHHHHTTTSC------CCHH-------HHHHHHHHHHHH-HHHHHHTTCEECSCCSGGGEEEEEEETTTT
T ss_pred             EecC-CCCHHHHHHHhhccC------CcHH-------HHHHHHHHHHHH-HHHHHhcCCEEecCCChHHeEEeccCCCcC
Confidence            6888 777887765421100      1111       123556655555 7889998 99999999999999643     


Q ss_pred             -CcEEEEecccccccchh
Q 013370           75 -GQIGFLDFGLLCRMERK   91 (444)
Q Consensus        75 -GrLvlLDFGmv~~L~~~   91 (444)
                       +++.++|||+...++..
T Consensus       174 ~~~~kl~Dfg~a~~~~~~  191 (373)
T 1q8y_A          174 LIQIKIADLGNACWYDEH  191 (373)
T ss_dssp             EEEEEECCCTTCEETTBC
T ss_pred             cceEEEcccccccccCCC
Confidence             48999999999877543

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=97.75  E-value=2e-05  Score=78.52  Aligned_cols=73  Identities=26%  Similarity=0.387  Sum_probs=50.6

Q ss_pred             CCCcCCCCcccHHhhcC--CCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHH--HcCccccCCCCCCeEEcc--C
Q 013370            1 MEWMVGESPTDLISLST--GSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLL--ETGILHADPHPGNLRYTS--S   74 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~--G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl--~~GfFHADPHPGNILv~~--D   74 (444)
                      |||++| .|.++.....  +.+        ...       ...++..++.+ +..++  ..|++|+|++|.||+++.  +
T Consensus       135 ~e~~~~-~L~~~l~~~~~~~~~--------~~~-------~~~i~~qi~~a-l~~lH~~~~~ivHrDlkp~NIll~~~~~  197 (382)
T 2vx3_A          135 FEMLSY-NLYDLLRNTNFRGVS--------LNL-------TRKFAQQMCTA-LLFLATPELSIIHCDLKPENILLCNPKR  197 (382)
T ss_dssp             EECCCC-BHHHHHHHTTTSCCC--------HHH-------HHHHHHHHHHH-HHHHTSTTTCEECCCCSGGGEEESSTTS
T ss_pred             EecCCC-CHHHHHhhcCcCCCC--------HHH-------HHHHHHHHHHH-HHHhccCCCCEEcCCCCcccEEEecCCC
Confidence            789977 7777765431  111        111       22445555444 56666  569999999999999964  6


Q ss_pred             CcEEEEecccccccch
Q 013370           75 GQIGFLDFGLLCRMER   90 (444)
Q Consensus        75 GrLvlLDFGmv~~L~~   90 (444)
                      |.+.++|||+...++.
T Consensus       198 ~~~kL~DFG~a~~~~~  213 (382)
T 2vx3_A          198 SAIKIVDFGSSCQLGQ  213 (382)
T ss_dssp             CCEEECCCTTCEETTC
T ss_pred             CcEEEEeccCceeccc
Confidence            7899999999987754

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=97.75  E-value=2.4e-05  Score=77.31  Aligned_cols=34  Identities=26%  Similarity=0.365  Sum_probs=29.0

Q ss_pred             cCccccCCCCCCeEEccCCc--EEEEecccccccch
Q 013370           57 TGILHADPHPGNLRYTSSGQ--IGFLDFGLLCRMER   90 (444)
Q Consensus        57 ~GfFHADPHPGNILv~~DGr--LvlLDFGmv~~L~~   90 (444)
                      .+++|+|.|||||+++++|.  +++|||++++.=++
T Consensus       216 ~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g~p  251 (359)
T 3dxp_A          216 TSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLGHP  251 (359)
T ss_dssp             CEEECSSCSGGGEEECSSSSCEEEECCCTTCEEECH
T ss_pred             ceEEeCCCCCCcEEEeCCCCcEEEEECccccccCCH
Confidence            57999999999999998863  58999998876555

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=97.74  E-value=4.9e-05  Score=77.32  Aligned_cols=91  Identities=15%  Similarity=0.144  Sum_probs=58.8

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccC-CcEEEEecccccccchhhHHh-HHHHHHHHHhCCHHHHHHHHHhc
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSS-GQIGFLDFGLLCRMERKHQFA-MLASIVHIVNGDWQSLVHSLTEM  118 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~D-GrLvlLDFGmv~~L~~~~R~~-l~~ll~alv~~D~~~la~~l~~l  118 (444)
                      .++..++.+ +..||..|++|+|++|.||+++.+ +.+.++|||+...+....... +.      ....| ...|.+...
T Consensus       160 ~~~~qi~~a-L~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~~~------~t~~y-~aPE~~~~~  231 (420)
T 1j1b_A          160 LYMYQLFRS-LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI------CSRYY-RAPELIFGA  231 (420)
T ss_dssp             HHHHHHHHH-HHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCC------SCTTS-CCHHHHTTC
T ss_pred             HHHHHHHHH-HHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhcccCCCceeee------eCCCc-CCHHHHcCC
Confidence            455555554 888999999999999999999976 568999999998775432210 00      01112 224444433


Q ss_pred             CCCCCCCChHHHHHHHHHHHh
Q 013370          119 DVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus       119 G~l~~~~d~~~~~~~L~~~l~  139 (444)
                      .......|++.+.--+..++.
T Consensus       232 ~~~~~~~DiwSlG~il~ell~  252 (420)
T 1j1b_A          232 TDYTSSIDVWSAGCVLAELLL  252 (420)
T ss_dssp             SSCCTHHHHHHHHHHHHHHHH
T ss_pred             CCCCchhhhHHHHHHHHHHHh
Confidence            334455677777666666554

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=97.74  E-value=2.3e-05  Score=79.60  Aligned_cols=50  Identities=20%  Similarity=0.274  Sum_probs=42.1

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchh
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~   91 (444)
                      .++..++.+ +..|+..|++|+|++|.||+++.+|.+.++|||+.......
T Consensus       215 ~i~~qi~~a-L~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~  264 (413)
T 3dzo_A          215 QLTLQVIRL-LASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS  264 (413)
T ss_dssp             HHHHHHHHH-HHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTEE
T ss_pred             HHHHHHHHH-HHHHHhCCcccCCcccceEEEecCCeEEEEeccceeecCCc
Confidence            444555554 88899999999999999999999999999999998766543

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=97.73  E-value=2.5e-05  Score=78.47  Aligned_cols=97  Identities=13%  Similarity=0.107  Sum_probs=56.7

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEE----ccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHH
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRY----TSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSL  115 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv----~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l  115 (444)
                      ..++..++.+ +..||..|++|+|++|.||++    +.+|++.++|||+...+....... ...-.......| ...+.+
T Consensus       131 ~~i~~qi~~a-l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~~~gt~~y-~aPE~~  207 (405)
T 3rgf_A          131 KSLLYQILDG-IHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPL-ADLDPVVVTFWY-RAPELL  207 (405)
T ss_dssp             HHHHHHHHHH-HHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC-----------------CCCTT-CCHHHH
T ss_pred             HHHHHHHHHH-HHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCccc-ccCCCceecCcc-cCchhh
Confidence            3556666555 888999999999999999999    667999999999998775432111 000000111112 224444


Q ss_pred             HhcCCCCCCCChHHHHHHHHHHHh
Q 013370          116 TEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus       116 ~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      ...+...+..|++.+.--+..++.
T Consensus       208 ~~~~~~~~~~DiwSlG~il~ell~  231 (405)
T 3rgf_A          208 LGARHYTKAIDIWAIGCIFAELLT  231 (405)
T ss_dssp             TTCCSCCHHHHHHHHHHHHHHHHH
T ss_pred             cCCCcccchhhhHHHHHHHHHHHh
Confidence            433334455677777666666554

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=97.64  E-value=4.2e-05  Score=78.42  Aligned_cols=50  Identities=26%  Similarity=0.410  Sum_probs=38.1

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEcc---CC--cEEEEecccccccchh
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTS---SG--QIGFLDFGLLCRMERK   91 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~---DG--rLvlLDFGmv~~L~~~   91 (444)
                      .++..++.+ +..||..|++|+|++|.||+++.   +|  ++.++|||+...++..
T Consensus       122 ~i~~qi~~a-L~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~  176 (432)
T 3p23_A          122 TLLQQTTSG-LAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG  176 (432)
T ss_dssp             HHHHHHHHH-HHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC---
T ss_pred             HHHHHHHHH-HHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCC
Confidence            345555444 88899999999999999999964   33  5779999999887654

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=97.51  E-value=8.9e-05  Score=69.72  Aligned_cols=35  Identities=26%  Similarity=0.353  Sum_probs=30.2

Q ss_pred             CccccCCCCCCeEEccCCcEEEEecccccccchhh
Q 013370           58 GILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKH   92 (444)
Q Consensus        58 GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~   92 (444)
                      .++|+|.|||||++++++..++|||+.++.=++..
T Consensus       194 ~l~HGDl~~~Nil~~~~~~~~viDwe~a~~gdp~~  228 (272)
T 4gkh_A          194 VVTHGDFSLDNLIFDEGKLIGCIDVGRVGIADRYQ  228 (272)
T ss_dssp             EEECSCCCTTSEEEETTEEEEECCCTTCEEEETHH
T ss_pred             EEEcCCCCCCeEEEECCeEEEEEECcccccCCHHH
Confidence            48999999999999987777899999998776643

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=97.40  E-value=0.00011  Score=70.93  Aligned_cols=35  Identities=17%  Similarity=0.359  Sum_probs=29.3

Q ss_pred             cCccccCCCCCCeEEccC--CcEEEEecccccccchh
Q 013370           57 TGILHADPHPGNLRYTSS--GQIGFLDFGLLCRMERK   91 (444)
Q Consensus        57 ~GfFHADPHPGNILv~~D--GrLvlLDFGmv~~L~~~   91 (444)
                      .+++|+|+||||++++++  +.+.+|||+.++.-++.
T Consensus       191 ~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~  227 (304)
T 3sg8_A          191 PCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPD  227 (304)
T ss_dssp             CEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTT
T ss_pred             ceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChH
Confidence            378999999999999984  45789999998776653

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=96.82  E-value=0.0004  Score=66.89  Aligned_cols=36  Identities=19%  Similarity=0.143  Sum_probs=31.5

Q ss_pred             HHcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           55 LETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        55 l~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      ...+++|+|+|||||++++++.+++|||+.++.=++
T Consensus       220 ~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~g~~  255 (346)
T 2q83_A          220 KSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSFDLP  255 (346)
T ss_dssp             HSCCEECSSCSTTSEEECGGGCEEECCCTTCEECCT
T ss_pred             ccCceecCCCCcccEEEeCCCcEEEEehhhcccCCh
Confidence            347899999999999999889999999998875554

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=96.79  E-value=0.00066  Score=68.91  Aligned_cols=36  Identities=17%  Similarity=0.215  Sum_probs=31.7

Q ss_pred             HcCccccCCCCCCeEEccCCcEEEEecccccccchhh
Q 013370           56 ETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKH   92 (444)
Q Consensus        56 ~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~   92 (444)
                      ..+++|+|+|||||++++++ +++|||+.++.=++..
T Consensus       231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~  266 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGF  266 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHH
T ss_pred             CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHH
Confidence            56899999999999999877 9999999998777653

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=96.54  E-value=0.0006  Score=66.54  Aligned_cols=35  Identities=26%  Similarity=0.342  Sum_probs=30.5

Q ss_pred             cCccccCCCCCCeEEccC----CcEEEEecccccccchh
Q 013370           57 TGILHADPHPGNLRYTSS----GQIGFLDFGLLCRMERK   91 (444)
Q Consensus        57 ~GfFHADPHPGNILv~~D----GrLvlLDFGmv~~L~~~   91 (444)
                      .+++|+|.|||||+++++    +.+++|||+.++.=++.
T Consensus       183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~~~  221 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGHRA  221 (333)
T ss_dssp             CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEECTT
T ss_pred             CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCCCH
Confidence            589999999999999985    78999999998776654

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=96.50  E-value=0.0024  Score=63.81  Aligned_cols=35  Identities=14%  Similarity=0.188  Sum_probs=29.0

Q ss_pred             HcCccccCCCCCCeEEccCCcEEEEecccccccchh
Q 013370           56 ETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        56 ~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~   91 (444)
                      ..+++|+|+|||||+++++ .+++|||..+..=++.
T Consensus       226 ~~~L~HGDl~~~Nil~~~~-~~~lID~e~a~~G~p~  260 (397)
T 2olc_A          226 AETLIHGDLHTGSIFASEH-ETKVIDPEFAFYGPIG  260 (397)
T ss_dssp             CCEEECSCCSGGGEEECSS-CEEECCCTTCEEECTH
T ss_pred             CCceeeCCCCcCcEEEeCC-CeEEEeCcccccCChH
Confidence            4689999999999999876 4999999777665554

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=96.46  E-value=0.00063  Score=65.73  Aligned_cols=35  Identities=26%  Similarity=0.475  Sum_probs=29.3

Q ss_pred             HcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           56 ETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        56 ~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      ..+++|+|+||+||++++++..++|||+.++.=++
T Consensus       186 ~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~g~~  220 (322)
T 2ppq_A          186 PAGVIHADLFQDNVFFLGDELSGLIDFYFACNDLL  220 (322)
T ss_dssp             CEEEECSCCCGGGEEEETTEEEEECCCTTCEEEEH
T ss_pred             CcccCCCCCCccCEEEeCCceEEEecchhccCchh
Confidence            35899999999999998776568999999876544

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=96.42  E-value=0.0021  Score=62.51  Aligned_cols=36  Identities=19%  Similarity=0.377  Sum_probs=30.2

Q ss_pred             cCccccCCCCCCeEEcc---CCcE-EEEecccccccchhh
Q 013370           57 TGILHADPHPGNLRYTS---SGQI-GFLDFGLLCRMERKH   92 (444)
Q Consensus        57 ~GfFHADPHPGNILv~~---DGrL-vlLDFGmv~~L~~~~   92 (444)
                      .+++|+|+||||+++++   +|++ ++||||.++.=++..
T Consensus       190 ~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~gd~~~  229 (306)
T 3tdw_A          190 PRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISDPDY  229 (306)
T ss_dssp             CEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEECGGG
T ss_pred             CeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCCCHHH
Confidence            37899999999999998   5776 799999988766643

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=96.27  E-value=0.0018  Score=62.57  Aligned_cols=33  Identities=24%  Similarity=0.241  Sum_probs=28.1

Q ss_pred             HcCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           56 ETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        56 ~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      ..+++|+|+|||||+++ + .+++|||+.++.=++
T Consensus       194 ~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~g~~  226 (328)
T 1zyl_A          194 TVLRLHGDCHAGNILWR-D-GPMFVDLDDARNGPA  226 (328)
T ss_dssp             CCEECCSSCSGGGEEES-S-SEEECCCTTCCEECT
T ss_pred             CeeeeeCCCCcccEeEc-C-CCEEEECCCCCcCcH
Confidence            35789999999999998 5 899999998866554

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=96.14  E-value=0.0014  Score=64.99  Aligned_cols=36  Identities=19%  Similarity=0.259  Sum_probs=32.1

Q ss_pred             HcCccccCCCCCCeEEccCCcEEEEecccccccchh
Q 013370           56 ETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        56 ~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~   91 (444)
                      ..++.|+|+||||++++++|.+.+|||+.++.-++.
T Consensus       205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~~~~  240 (339)
T 3i1a_A          205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPMLAPKE  240 (339)
T ss_dssp             GCEEECSCCCGGGEEECGGGCEEECCCSSCEEECTH
T ss_pred             CceeEeCCCCcCCEEEeCCCeEEEEECCCCeeCCHH
Confidence            458999999999999999999999999998877664

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=96.06  E-value=0.0015  Score=64.13  Aligned_cols=37  Identities=24%  Similarity=0.388  Sum_probs=30.4

Q ss_pred             HcCccccCCCCCCeEEccCCcEEEEecccccccchhh
Q 013370           56 ETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKH   92 (444)
Q Consensus        56 ~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~   92 (444)
                      ..+++|+|.|||||+++.++.+++|||+.++.=++..
T Consensus       221 ~~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~g~p~~  257 (357)
T 3ats_A          221 EPVLLWGDARVGNVLYRDFQPVAVLDWEMVALGPREL  257 (357)
T ss_dssp             CCEEECSSCSGGGEEEETTEEEEECCGGGCEEECHHH
T ss_pred             CceEEeCCCCCCeEEEeCCcEEEEEcccccccCCcHH
Confidence            4689999999999999953447999999998766643

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=95.80  E-value=0.0026  Score=61.24  Aligned_cols=33  Identities=15%  Similarity=0.183  Sum_probs=28.7

Q ss_pred             CccccCCCCCCeEEccCCcEEEEecccccccchh
Q 013370           58 GILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        58 GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~   91 (444)
                      ++.|+|+||||++ ..+|++++|||..++.=++.
T Consensus       174 ~l~HgDl~~~Nil-~~~~~~~lID~e~a~~g~~~  206 (301)
T 3dxq_A          174 AACHCDPLCENFL-DTGERMWIVDWEYSGMNDPL  206 (301)
T ss_dssp             EEECSCCCGGGEE-ECSSCEEECCCTTCEEECTH
T ss_pred             eeeccCCCcCCEE-ECCCCEEEEecccccCCCHH
Confidence            5899999999999 67889999999988766654

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=95.72  E-value=0.0028  Score=62.82  Aligned_cols=33  Identities=18%  Similarity=0.109  Sum_probs=27.1

Q ss_pred             cCccccCCCCCCeEEccCCcEEEEecccccccch
Q 013370           57 TGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        57 ~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~   90 (444)
                      .++.|+|+|||||+++++ ++++|||..++.=++
T Consensus       212 ~~l~HgDl~~~Nil~~~~-~~~lID~e~a~~g~~  244 (369)
T 3c5i_A          212 IVFCHNDLQENNIINTNK-CLRLIDFEYSGFNFL  244 (369)
T ss_dssp             EEEECSCCCGGGEEECC--CEEECCCTTCEEEEH
T ss_pred             eEEEeCCCCcccEEecCC-cEEEEEecCCCCCch
Confidence            479999999999999754 599999998875544

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=95.52  E-value=0.003  Score=64.93  Aligned_cols=35  Identities=20%  Similarity=0.298  Sum_probs=29.1

Q ss_pred             cCccccCCCCCCeEEccC----------------------------CcEEEEecccccccchh
Q 013370           57 TGILHADPHPGNLRYTSS----------------------------GQIGFLDFGLLCRMERK   91 (444)
Q Consensus        57 ~GfFHADPHPGNILv~~D----------------------------GrLvlLDFGmv~~L~~~   91 (444)
                      .+|.|+|+|||||+++++                            +.+++|||..++.=++.
T Consensus       249 ~v~~H~Dl~~gNiL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lIDfEya~~g~p~  311 (429)
T 1nw1_A          249 VTFCHNDLQEGNILLPKASSGNIRMPSLSDETQALGNSLSAFNPADPRLVLIDFEYASYNYRA  311 (429)
T ss_dssp             EEEECSCCCGGGEEEEC------------------------------CCEECCCTTCEEEEHH
T ss_pred             eEEEeCCCCCCeEEeeCCccccccccccccccccccccccccccCCCeEEEEecccCCcCccH
Confidence            379999999999999986                            78999999998876664

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=95.16  E-value=0.006  Score=63.55  Aligned_cols=35  Identities=34%  Similarity=0.545  Sum_probs=30.2

Q ss_pred             cCccccCCCCCCeEEc-------------------------------------cCCcEEEEecccccccchh
Q 013370           57 TGILHADPHPGNLRYT-------------------------------------SSGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        57 ~GfFHADPHPGNILv~-------------------------------------~DGrLvlLDFGmv~~L~~~   91 (444)
                      .+|.|+|+|||||+++                                     +++.+++|||..++.=++.
T Consensus       290 ~v~cHnDl~~gNIL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lIDfEya~~gdp~  361 (458)
T 2qg7_A          290 IVLCHCDLLSSNIINTVGGGEAGELGEAGETGEGGETGEGGETGEGGETGEGGEGDSISFIDFEYSCPMERA  361 (458)
T ss_dssp             EEEECSCCCGGGEEECCC-----------------------------------CCCCEEECCCTTCEEEEHH
T ss_pred             eeEEecCCCCCcEEeecccccccccccccccccccccccccccccccccccCCCCCeEEEEeecCCCCCCcH
Confidence            3799999999999998                                     4678999999998876664

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=94.05  E-value=0.012  Score=58.13  Aligned_cols=27  Identities=19%  Similarity=0.047  Sum_probs=24.4

Q ss_pred             cCccccCCCCCCeEEccCCcEEEEeccc
Q 013370           57 TGILHADPHPGNLRYTSSGQIGFLDFGL   84 (444)
Q Consensus        57 ~GfFHADPHPGNILv~~DGrLvlLDFGm   84 (444)
                      -+++|+|.||||++++++| .+++||++
T Consensus       207 ~~l~HgD~~~~N~l~~~~~-~~~iD~~~  233 (312)
T 3jr1_A          207 PSILHGNLWIENCIQVDDK-IFVCNPAC  233 (312)
T ss_dssp             CEEECSSCSGGGEEEETTE-EEECSCCC
T ss_pred             ceeEeCCCCcCcEeecCCC-eEEEcCcc
Confidence            4799999999999999988 99999953

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=93.87  E-value=0.017  Score=58.61  Aligned_cols=35  Identities=23%  Similarity=0.249  Sum_probs=30.7

Q ss_pred             cCccccCCCCCCeEEccC----CcEEEEecccccccchh
Q 013370           57 TGILHADPHPGNLRYTSS----GQIGFLDFGLLCRMERK   91 (444)
Q Consensus        57 ~GfFHADPHPGNILv~~D----GrLvlLDFGmv~~L~~~   91 (444)
                      .++.|+|.|||||+++++    |.+++|||..++.-++.
T Consensus       220 ~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~~~~~  258 (379)
T 3feg_A          220 VVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSYNYRG  258 (379)
T ss_dssp             EEEECSCCCGGGEEEESCC---CCEEECCCTTCEEEEHH
T ss_pred             cEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCcCChH
Confidence            379999999999999987    79999999998876653

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=92.34  E-value=0.036  Score=52.81  Aligned_cols=27  Identities=22%  Similarity=0.341  Sum_probs=22.9

Q ss_pred             CccccCCCCCCeEEccCCcEEEEecccc
Q 013370           58 GILHADPHPGNLRYTSSGQIGFLDFGLL   85 (444)
Q Consensus        58 GfFHADPHPGNILv~~DGrLvlLDFGmv   85 (444)
                      .++|+|+||||++++++|. +++|-.+.
T Consensus       189 ~LvHGDlw~gNvl~~~~g~-~~iDp~~~  215 (288)
T 3f7w_A          189 ARIHGDLWNGNVLWQDDGA-VVIDPAAH  215 (288)
T ss_dssp             EEECSCCSGGGEEEETTEE-EECSCCCE
T ss_pred             eeeecCCCCCcEEEcCCCe-EEEecccc
Confidence            6899999999999999884 67886544

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=91.05  E-value=0.061  Score=55.46  Aligned_cols=34  Identities=18%  Similarity=0.173  Sum_probs=29.7

Q ss_pred             cCccccCCCCCCeEEccCCcEEEEecccccccchh
Q 013370           57 TGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK   91 (444)
Q Consensus        57 ~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~   91 (444)
                      .++.|+|.||||++ .+++.+.+|||-.++.-++.
T Consensus       262 ~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~~~~~  295 (424)
T 3mes_A          262 LVFAHNDLQENNLL-QTQNNIRMIDYEYSAINFAG  295 (424)
T ss_dssp             EEEECSCCCGGGEE-ECSSCEEECCCTTCEEEEHH
T ss_pred             ceEECCCCCcccee-cCCCcEEEEecccCCcCChH
Confidence            46899999999999 78899999999998876653

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=90.12  E-value=0.11  Score=52.52  Aligned_cols=33  Identities=21%  Similarity=0.261  Sum_probs=27.6

Q ss_pred             CccccCCCCCCeEEc------cCCcEEEEecccccccch
Q 013370           58 GILHADPHPGNLRYT------SSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        58 GfFHADPHPGNILv~------~DGrLvlLDFGmv~~L~~   90 (444)
                      .|.|+|.++|||++.      .+++|++|||=..+.=++
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~n~~  283 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYNYR  283 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEEEEH
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhccCCCc
Confidence            478999999999995      357899999998876655

>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*

Probab=86.86  E-value=0.29  Score=53.70  Aligned_cols=24  Identities=38%  Similarity=0.668  Sum_probs=23.2

Q ss_pred             cCCCCCCeEEccCCcEEEEecccc
Q 013370           62 ADPHPGNLRYTSSGQIGFLDFGLL   85 (444)
Q Consensus        62 ADPHPGNILv~~DGrLvlLDFGmv   85 (444)
                      +|=||+||+++.+|+++=||||.+
T Consensus       551 GDRH~~NILid~tG~v~HIDFG~~  574 (696)
T 2x6h_A          551 GDRHLDNLLLTTNGKLFHIDFGYI  574 (696)
T ss_dssp             CCCCTTTEEECTTSCEEECCCCSC
T ss_pred             CCCCCcceEEeCCCCEEEEeehhh
Confidence            799999999999999999999997

>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A

Probab=86.55  E-value=0.31  Score=52.67  Aligned_cols=24  Identities=38%  Similarity=0.657  Sum_probs=23.1

Q ss_pred             cCCCCCCeEEccCCcEEEEecccc
Q 013370           62 ADPHPGNLRYTSSGQIGFLDFGLL   85 (444)
Q Consensus        62 ADPHPGNILv~~DGrLvlLDFGmv   85 (444)
                      +|=|||||+++.+|+++=||||.+
T Consensus       477 gDRH~~NILld~tG~v~HIDFG~~  500 (614)
T 3ls8_A          477 GDRHLDNLLLTKTGKLFHIDFGYI  500 (614)
T ss_dssp             CCCCTTSEEECTTSCEEECCCSSC
T ss_pred             cCCCCcceeEcCCCCEeeeehHHh
Confidence            599999999999999999999998

>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}

Probab=81.67  E-value=0.65  Score=53.37  Aligned_cols=24  Identities=33%  Similarity=0.627  Sum_probs=23.3

Q ss_pred             cCCCCCCeEEccCCcEEEEecccc
Q 013370           62 ADPHPGNLRYTSSGQIGFLDFGLL   85 (444)
Q Consensus        62 ADPHPGNILv~~DGrLvlLDFGmv   85 (444)
                      +|=|||||+++.+|+++=||||.+
T Consensus       940 GDRH~~NILid~tG~v~HIDFG~~  963 (1092)
T 2y3a_A          940 GDRHSDNIMVKKTGQLFHIDFGHI  963 (1092)
T ss_dssp             CCCCTTTEEECTTSCEEECCCSCC
T ss_pred             CCCCCccEEEecCCCEEEEeehhh
Confidence            799999999999999999999987

>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*

Probab=80.84  E-value=0.55  Score=53.21  Aligned_cols=24  Identities=38%  Similarity=0.628  Sum_probs=23.2

Q ss_pred             cCCCCCCeEEccCCcEEEEecccc
Q 013370           62 ADPHPGNLRYTSSGQIGFLDFGLL   85 (444)
Q Consensus        62 ADPHPGNILv~~DGrLvlLDFGmv   85 (444)
                      +|=|||||+++.+|+++=||||.+
T Consensus       788 gDRH~~NILid~tG~v~HIDFG~~  811 (940)
T 2wxf_A          788 GDRHSDNIMIRESGQLFHIDFGHF  811 (940)
T ss_dssp             CCCCGGGEEEETTSCEEECCCCCC
T ss_pred             CCCCcccEEEecCCCEEEEeehhh
Confidence            799999999999999999999987

>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A

Probab=80.24  E-value=0.74  Score=52.81  Aligned_cols=24  Identities=33%  Similarity=0.594  Sum_probs=23.3

Q ss_pred             cCCCCCCeEEccCCcEEEEecccc
Q 013370           62 ADPHPGNLRYTSSGQIGFLDFGLL   85 (444)
Q Consensus        62 ADPHPGNILv~~DGrLvlLDFGmv   85 (444)
                      +|=|||||+++++|+++=||||.+
T Consensus       937 gDRH~~NILid~tG~v~HIDFG~~  960 (1091)
T 3hhm_A          937 GDRHNSNIMVKDDGQLFHIDFGHF  960 (1091)
T ss_dssp             CCCCTTTEEEETTSCEEECCCCCC
T ss_pred             cCCCCcceEEeCCCCEEEEeehhh
Confidence            799999999999999999999998

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	444
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.02
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	98.99
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	98.88
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	98.88
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	98.82
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	98.81
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	98.78
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	98.78
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	98.76
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	98.76
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	98.73
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	98.72
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	98.7
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	98.68
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	98.68
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	98.63
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	98.61
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	98.59
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	98.58
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	98.54
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	98.54
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	98.53
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	98.51
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	98.5
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	98.5
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	98.49
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	98.49
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	98.48
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	98.47
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	98.47
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	98.44
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	98.43
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	98.42
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	98.42
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	98.41
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	98.4
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	98.39
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	98.37
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	98.37
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	98.35
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	98.34
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	98.33
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	98.32
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	98.32
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	98.3
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	98.29
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	98.29
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	98.26
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	98.24
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	98.2
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	98.19
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	98.18
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	98.17
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	98.12
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	98.1
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	98.09
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	98.08
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	98.05
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	98.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	97.99
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	97.99
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	97.69
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	97.25
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	97.13
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	96.98
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	96.87
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	96.44
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	95.58
d1e7ua4	369	Phoshoinositide 3-kinase (PI3K), catalytic domain	88.9
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	86.06

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.02  E-value=9.1e-11  Score=105.05  Aligned_cols=50  Identities=18%  Similarity=0.303  Sum_probs=41.0

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhh
Q 013370           41 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKH   92 (444)
Q Consensus        41 ~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~   92 (444)
                      .++..++++ +.++|..|++|+|+||+||+++++ .++++|||++..++...
T Consensus       107 ~i~~ql~~~-l~~lH~~giiHrDiKP~NILv~~~-~~~liDFG~a~~~~~~~  156 (191)
T d1zara2         107 EVLDMILEE-VAKFYHRGIVHGDLSQYNVLVSEE-GIWIIDFPQSVEVGEEG  156 (191)
T ss_dssp             HHHHHHHHH-HHHHHHTTEECSCCSTTSEEEETT-EEEECCCTTCEETTSTT
T ss_pred             HHHHHHHHH-HHHHhhCCEEEccCChhheeeeCC-CEEEEECCCcccCCCCC
Confidence            455555555 889999999999999999999864 59999999998887543

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=2.4e-10  Score=108.26  Aligned_cols=130  Identities=12%  Similarity=0.120  Sum_probs=86.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+.......++        +.       ....++..++.+ +..+|..|++|+|++|.||+++.+|++.++
T Consensus        85 mEy~~~g~L~~~l~~~~~l~--------e~-------~~~~i~~qi~~a-l~~lH~~~ivHrDiKp~Nill~~~~~~kl~  148 (263)
T d2j4za1          85 LEYAPLGTVYRELQKLSKFD--------EQ-------RTATYITELANA-LSYCHSKRVIHRDIKPENLLLGSAGELKIA  148 (263)
T ss_dssp             EECCTTCBHHHHHHHHSSCC--------HH-------HHHHHHHHHHHH-HHHHHHTTCCCCCCCGGGEEECTTSCEEEC
T ss_pred             EeecCCCcHHHHHhhcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCeeeeeeccccceecCCCCEeec
Confidence            89999999998876433222        11       123566666665 888999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHhchhccCCCCcccHHHHHH
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLG  157 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~~~~~~~~l~~~~f~~ll~  157 (444)
                      |||+...++.........      ...| ...|.+..- ..++..|++.+.--+..++...   .+....+..++..
T Consensus       149 DFG~a~~~~~~~~~~~~G------t~~Y-~APE~~~~~-~~~~~~DiwSlGvilyell~G~---~Pf~~~~~~~~~~  214 (263)
T d2j4za1         149 DFGWSVHAPSSRRTTLCG------TLDY-LPPEMIEGR-MHDEKVDLWSLGVLCYEFLVGK---PPFEANTYQETYK  214 (263)
T ss_dssp             CCCSCSCCCCCCCEETTE------EGGG-CCHHHHTTC-CCCTTHHHHHHHHHHHHHHHSS---CTTCCSSHHHHHH
T ss_pred             ccceeeecCCCcccccCC------CCcc-cCHHHHcCC-CCCchhhhhhHhHHHHHHhcCC---CCCCCCCHHHHHH
Confidence            999998887654332211      1122 224555443 3456788998877777766532   2344444444443

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=7.7e-10  Score=106.16  Aligned_cols=118  Identities=18%  Similarity=0.125  Sum_probs=75.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.++......++        +.       ....++..++.+ +..+|..|++|+|++|.||+++.+|.+.+.
T Consensus        87 mEy~~gg~L~~~~~~~~~l~--------e~-------~~~~~~~qi~~a-l~ylH~~~iiHrDiKp~NIll~~~~~vkl~  150 (288)
T d1uu3a_          87 LSYAKNGELLKYIRKIGSFD--------ET-------CTRFYTAEIVSA-LEYLHGKGIIHRDLKPENILLNEDMHIQIT  150 (288)
T ss_dssp             ECCCTTEEHHHHHHHHSSCC--------HH-------HHHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEECTTSCEEEC
T ss_pred             EEccCCCCHHHhhhccCCCC--------HH-------HHHHHHHHHHHH-HHhhccccEEcCcCCccccccCCCceEEec
Confidence            89999999988766543332        11       123455566655 788999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCH-HHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDW-QSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~-~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||+...++...........    .+.. ....|.+..-. .++..|++++.--+..++.
T Consensus       151 DFG~a~~~~~~~~~~~~~~~----~GT~~Y~APE~~~~~~-~~~~~DiwSlGvilyell~  205 (288)
T d1uu3a_         151 DFGTAKVLSPESKQARANSF----VGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVA  205 (288)
T ss_dssp             CCTTCEECC----------C----CCCGGGCCHHHHHTCC-CCHHHHHHHHHHHHHHHHH
T ss_pred             ccccceecccCCcccccccc----cCCccccCceeeccCC-CCcccceehhhHHHHHHhh
Confidence            99999988765433222111    1221 12245554332 3345678877766666664

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.88  E-value=1.5e-09  Score=105.24  Aligned_cols=130  Identities=15%  Similarity=0.139  Sum_probs=83.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.+.+........+        ..       ....++..++.+ +..+|..|++|+|++|.||+++.+|++.++
T Consensus        83 mE~~~gg~l~~~~~~~~~~~--------~~-------~~~~~~~qi~~a-l~~lH~~~iiHrDiKp~NILl~~~g~vkL~  146 (316)
T d1fota_          83 MDYIEGGELFSLLRKSQRFP--------NP-------VAKFYAAEVCLA-LEYLHSKDIIYRDLKPENILLDKNGHIKIT  146 (316)
T ss_dssp             ECCCCSCBHHHHHHHTSSCC--------HH-------HHHHHHHHHHHH-HHHHHTTTEECCCCCGGGEEECTTSCEEEC
T ss_pred             eeecCCcccccccccccccc--------cc-------HHHHHHHHHHHh-hhhhccCcEEccccCchheeEcCCCCEEEe
Confidence            89999999888776543222        11       112344444444 788999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHhchhccCCCCcccHHHHHHH
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGK  158 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~~~~~~~~l~~~~f~~ll~~  158 (444)
                      |||+...+...... .+.      +..| ...|.+..-+ .++..|++++.--+..++...   .+....+..++..+
T Consensus       147 DFG~a~~~~~~~~~-~~G------t~~Y-~APE~l~~~~-y~~~~DiwSlGvilyemltG~---~Pf~~~~~~~~~~~  212 (316)
T d1fota_         147 DFGFAKYVPDVTYT-LCG------TPDY-IAPEVVSTKP-YNKSIDWWSFGILIYEMLAGY---TPFYDSNTMKTYEK  212 (316)
T ss_dssp             CCSSCEECSSCBCC-CCS------CTTT-CCHHHHTTCC-BCTTHHHHHHHHHHHHHHHSS---CTTCCSSHHHHHHH
T ss_pred             cCccceEecccccc-ccC------cccc-cCHHHHcCCC-CCchhhccccchhHHHHHhCC---CCCCCcCHHHHHHH
Confidence            99999887654321 110      1122 1245554332 345678888877777766432   23344444444443

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=1.7e-09  Score=104.00  Aligned_cols=116  Identities=17%  Similarity=0.269  Sum_probs=77.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.++..- .+++        +.       ....++..++.+ +..||..|++|+|++|.||+++.+|++.++
T Consensus        96 mEy~~gg~L~~~~~~-~~l~--------~~-------~~~~i~~qi~~a-L~yLH~~~iiHrDiKp~NILl~~~~~vkl~  158 (293)
T d1yhwa1          96 MEYLAGGSLTDVVTE-TCMD--------EG-------QIAAVCRECLQA-LEFLHSNQVIHRDIKSDNILLGMDGSVKLT  158 (293)
T ss_dssp             EECCTTCBHHHHHHH-SCCC--------HH-------HHHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEECTTCCEEEC
T ss_pred             EEecCCCcHHHHhhc-cCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCCcccCCcHHHeEECCCCcEeec
Confidence            899999999887642 2332        11       123556666655 889999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHH-HHHHHHHhcCCCCCCCChHHHHHHHHHHHhc
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQ-SLVHSLTEMDVVRPGTNTLRVTMDLEDALGE  140 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~-~la~~l~~lG~l~~~~d~~~~~~~L~~~l~~  140 (444)
                      |||+...++++....-.      ..+... ...|.+.. +..++..|++.+.--+..++..
T Consensus       159 DFG~a~~~~~~~~~~~~------~~gt~~Y~aPE~~~~-~~~~~~~DiwSlGvilyemltG  212 (293)
T d1yhwa1         159 DFGFCAQITPEQSKRST------MVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMIEG  212 (293)
T ss_dssp             CCTTCEECCSTTCCBCC------CCSCGGGCCHHHHSS-SCBCTHHHHHHHHHHHHHHHHS
T ss_pred             cchhheeeccccccccc------cccCCCccChhhhcC-CCCCchhceehHhHHHHHHhhC
Confidence            99999988654321100      011111 12444433 3345567888887777666643

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.81  E-value=2.7e-09  Score=105.00  Aligned_cols=114  Identities=15%  Similarity=0.114  Sum_probs=78.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+.|+.+.+.......++        +.       ....++..++.+ +..||..|++|+|++|.||+++.+|++.++
T Consensus       120 ~e~~~~g~l~~~l~~~~~l~--------e~-------~~~~i~~qi~~a-L~yLH~~~iiHRDIKP~NILl~~~g~ikL~  183 (350)
T d1rdqe_         120 MEYVAGGEMFSHLRRIGRFS--------EP-------HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQVT  183 (350)
T ss_dssp             EECCTTCBHHHHHHHHCCCC--------HH-------HHHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEECTTSCEEEC
T ss_pred             cccccccchhhhHhhcCCCC--------HH-------HHHHHHHHHHHH-HHHHHhCCEecCcCCHHHcccCCCCCEEee
Confidence            78999999988776443332        11       123556666655 888999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCH-HHHHHHHHhcCCCCCCCChHHHHHHHHHHHhc
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDW-QSLVHSLTEMDVVRPGTNTLRVTMDLEDALGE  140 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~-~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~~  140 (444)
                      |||+...++..... +        .+.. ....|.+..-+ ..+..|++.+.--+..++..
T Consensus       184 DFG~a~~~~~~~~~-~--------~Gt~~Y~APE~~~~~~-~~~~~DiwSlGvilyemltG  234 (350)
T d1rdqe_         184 DFGFAKRVKGRTWT-L--------CGTPEALAPEIILSKG-YNKAVDWWALGVLIYEMAAG  234 (350)
T ss_dssp             CCTTCEECSSCBCC-C--------EECGGGCCHHHHTTCC-BCTHHHHHHHHHHHHHHHHS
T ss_pred             eceeeeeccccccc-c--------cCccccCCHHHHcCCC-CCccccccchhHHHHHHHhC
Confidence            99999988754321 1        1121 12245554433 34557888887777766643

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.78  E-value=6.2e-09  Score=100.44  Aligned_cols=117  Identities=20%  Similarity=0.187  Sum_probs=69.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEc---cCCcE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYT---SSGQI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~---~DGrL   77 (444)
                      |||++|++|.++......++        +.+       ...++..++.+ +..+|..|++|+|++|.||++.   ++|++
T Consensus        86 mE~~~gg~L~~~l~~~~~l~--------e~~-------~~~~~~qi~~a-l~ylH~~~iiHrDiKp~Nil~~~~~~~~~v  149 (307)
T d1a06a_          86 MQLVSGGELFDRIVEKGFYT--------ERD-------ASRLIFQVLDA-VKYLHDLGIVHRDLKPENLLYYSLDEDSKI  149 (307)
T ss_dssp             ECCCCSCBHHHHHHTCSCCC--------HHH-------HHHHHHHHHHH-HHHHHHTTCCCSCCCGGGEEESSSSTTCCE
T ss_pred             EeccCCCcHHHhhhcccCCC--------HHH-------HHHHHHHHHHH-HHhhhhceeeeEEecccceeecccCCCceE
Confidence            89999999999876443332        111       23456666655 8889999999999999999995   47899


Q ss_pred             EEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHhc
Q 013370           78 GFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGE  140 (444)
Q Consensus        78 vlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~~  140 (444)
                      .++|||+....++.....   ..  .-...|. ..|.+..- -.++..|++++.--+..++..
T Consensus       150 kl~DFG~a~~~~~~~~~~---~~--~GT~~y~-APE~~~~~-~~~~~~DiwSlGvilyell~g  205 (307)
T d1a06a_         150 MISDFGLSKMEDPGSVLS---TA--CGTPGYV-APEVLAQK-PYSKAVDCWSIGVIAYILLCG  205 (307)
T ss_dssp             EECCC-----------------------CTTS-CHHHHTTC-CCCTHHHHHHHHHHHHHHHHS
T ss_pred             EEeccceeEEccCCCeee---ee--eeCcccc-CcHHHcCC-CCCcHHHhhhhhHHHHHHHhC
Confidence            999999998776543321   11  1122332 24555443 335567888887767666643

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.78  E-value=1.5e-09  Score=107.42  Aligned_cols=115  Identities=17%  Similarity=0.180  Sum_probs=78.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+++......+        +.       ....++..++.+ +..+|..|++|+|++|.||+++.+|.+.++
T Consensus        86 mE~~~gg~L~~~l~~~~~~~--------e~-------~~~~~~~qi~~a-L~ylH~~~iiHrDlKP~NILl~~~g~iKl~  149 (364)
T d1omwa3          86 LDLMNGGDLHYHLSQHGVFS--------EA-------DMRFYAAEIILG-LEHMHNRFVVYRDLKPANILLDEHGHVRIS  149 (364)
T ss_dssp             ECCCCSCBHHHHHHHHCSCC--------HH-------HHHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEECSSSCEEEC
T ss_pred             EEecCCCcHHHHHHhccccc--------HH-------HHHHHHHHHHHH-HHHHHHCCccceeeccceeEEcCCCcEEEe
Confidence            89999999999876442221        11       123455555544 888999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHH-HHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQS-LVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~-la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||+...++.......+        +...- ..+.+..-...++..|++.+.--+..++.
T Consensus       150 DFGla~~~~~~~~~~~~--------GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemlt  201 (364)
T d1omwa3         150 DLGLACDFSKKKPHASV--------GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLR  201 (364)
T ss_dssp             CCTTCEECSSSCCCSCC--------SCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred             eeceeeecCCCcccccc--------cccccchhHHhhcCCCCCcccchhHHHHHHHHHHh
Confidence            99999888765332221        22222 24444332234556788888777777664

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=2.4e-09  Score=104.98  Aligned_cols=143  Identities=17%  Similarity=0.106  Sum_probs=89.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+........+        ++       ....++..++.+ +..+|..|++|+|++|.||+++.+|++.++
T Consensus        84 ~ey~~gg~L~~~~~~~~~~~--------e~-------~~~~~~~qil~a-l~ylH~~~iiHRDlKP~NILl~~~g~vkl~  147 (337)
T d1o6la_          84 MEYANGGELFFHLSRERVFT--------EE-------RARFYGAEIVSA-LEYLHSRDVVYRDIKLENLMLDKDGHIKIT  147 (337)
T ss_dssp             EECCTTCBHHHHHHHHSCCC--------HH-------HHHHHHHHHHHH-HHHHHHTTCBCCCCCGGGEEECTTSCEEEC
T ss_pred             eeccCCCchhhhhhcccCCc--------HH-------HHHHHHHHHhhh-hhhhhhcCccccccCHHHeEecCCCCEEEe
Confidence            89999999988876543332        11       123455555554 788999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHH-HHHHHHhcCCCCCCCChHHHHHHHHHHHhchhccCCCCcccHHHHHHHH
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQS-LVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKI  159 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~-la~~l~~lG~l~~~~d~~~~~~~L~~~l~~~~~~~~l~~~~f~~ll~~l  159 (444)
                      |||+...+........      -..+...- ..+.+..-++ ++..|.+.+.--+..++...   .+...-+..++.   
T Consensus       148 DFG~a~~~~~~~~~~~------~~~GT~~Y~aPE~~~~~~y-~~~~DiwSlGvilyeml~G~---~pf~~~~~~~~~---  214 (337)
T d1o6la_         148 DFGLCKEGISDGATMK------TFCGTPEYLAPEVLEDNDY-GRAVDWWGLGVVMYEMMCGR---LPFYNQDHERLF---  214 (337)
T ss_dssp             CCTTCBCSCCTTCCBC------CCEECGGGCCGGGGSSSCB-CTTHHHHHHHHHHHHHHHSS---CSSCCSSHHHHH---
T ss_pred             ecccccccccCCcccc------cceeCHHHhhhhhccCCCC-ChhhcccchhhHHHHHHHCC---CCCCCcCHHHHH---
Confidence            9999987754321110      00111111 1344433333 56778888877777766432   233334444443   


Q ss_pred             HHHHHhCCcCCChH
Q 013370          160 WSIALKYHFRMPPY  173 (444)
Q Consensus       160 ~~l~~~~~~~vP~~  173 (444)
                       .......+.+|..
T Consensus       215 -~~i~~~~~~~p~~  227 (337)
T d1o6la_         215 -ELILMEEIRFPRT  227 (337)
T ss_dssp             -HHHHHCCCCCCTT
T ss_pred             -HHHhcCCCCCCcc
Confidence             3334445555543

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.76  E-value=5.5e-09  Score=100.25  Aligned_cols=122  Identities=14%  Similarity=0.171  Sum_probs=66.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.++.....+.       ++..+       ...++..++.+ +..||..|++|+|++|.||+++.+|.+.+.
T Consensus       106 ~Ey~~~g~L~~~~~~~~~~-------l~~~~-------~~~i~~qia~g-l~yLH~~~iiHrDlKp~NILl~~~~~~Kl~  170 (299)
T d1jpaa_         106 TEFMENGSLDSFLRQNDGQ-------FTVIQ-------LVGMLRGIAAG-MKYLADMNYVHRDLAARNILVNSNLVCKVS  170 (299)
T ss_dssp             EECCTTEEHHHHHHTTTTC-------SCHHH-------HHHHHHHHHHH-HHHHHHTTCCCSCCCGGGEEECTTCCEEEC
T ss_pred             EEecCCCcceeeeccccCC-------CCHHH-------HHHHHHHHHHH-HHHHhhCCCccCccccceEEECCCCcEEEC
Confidence            8999999999976643221       11222       22455555444 888999999999999999999999999999


Q ss_pred             ecccccccchhhHHhH-HHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQFAM-LASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l-~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||+...+.+.....- .........-.|. ..+.+ .-+-..+..|++.|.--+.+++.
T Consensus       171 DFGla~~~~~~~~~~~~~~~~~~~~t~~y~-aPE~~-~~~~~~~~sDvwS~Gvvl~el~t  228 (299)
T d1jpaa_         171 DFGLSRFLEDDTSDPTYTSALGGKIPIRWT-APEAI-QYRKFTSASDVWSYGIVMWEVMS  228 (299)
T ss_dssp             CC-----------------------CGGGS-CHHHH-HSCCCCHHHHHHHHHHHHHHHHT
T ss_pred             CcccceEccCCCCcceeeecccccCCcccc-CHHHH-hcCCCCcccccccchHHHHHHHh
Confidence            9999988765433221 1111000001111 12333 23444455678877766666653

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=98.73  E-value=2.5e-09  Score=105.41  Aligned_cols=132  Identities=15%  Similarity=0.204  Sum_probs=80.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEc--cCCcEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYT--SSGQIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~--~DGrLv   78 (444)
                      |||++|+.|.+...... .+      +++.       ....++..++.+ +..+|..|++|+|++|.|||++  .+|++.
T Consensus       105 mE~~~gg~L~~~~~~~~-~~------l~e~-------~~~~i~~qi~~a-L~ylH~~~iiHRDiKp~NILl~~~~~~~vk  169 (352)
T d1koba_         105 LEFLSGGELFDRIAAED-YK------MSEA-------EVINYMRQACEG-LKHMHEHSIVHLDIKPENIMCETKKASSVK  169 (352)
T ss_dssp             EECCCCCBHHHHTTCTT-CC------BCHH-------HHHHHHHHHHHH-HHHHHHTTEECCCCCGGGEEESSTTCCCEE
T ss_pred             EEcCCCChHHHHHHhcC-CC------CCHH-------HHHHHHHHHHHH-HHHHHHCCeeecccccccccccccCCCeEE
Confidence            89999999987654221 11      1122       123556666655 8889999999999999999998  579999


Q ss_pred             EEecccccccchhhHHhHHHHHHHHHhCCHHH-HHHHHHhcCCCCCCCChHHHHHHHHHHHhchhccCCCCcccHHHHHH
Q 013370           79 FLDFGLLCRMERKHQFAMLASIVHIVNGDWQS-LVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLG  157 (444)
Q Consensus        79 lLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~-la~~l~~lG~l~~~~d~~~~~~~L~~~l~~~~~~~~l~~~~f~~ll~  157 (444)
                      ++|||+...+++.......       .+...- ..+.+.. .-..+..|++.+.--+..++...   .+....+..+++.
T Consensus       170 L~DFGla~~~~~~~~~~~~-------~gt~~y~aPE~~~~-~~~~~~~DiwSlGvilyelltG~---~Pf~~~~~~~~~~  238 (352)
T d1koba_         170 IIDFGLATKLNPDEIVKVT-------TATAEFAAPEIVDR-EPVGFYTDMWAIGVLGYVLLSGL---SPFAGEDDLETLQ  238 (352)
T ss_dssp             ECCCTTCEECCTTSCEEEE-------CSSGGGCCHHHHTT-CCBCHHHHHHHHHHHHHHHHHSC---CSSCCSSHHHHHH
T ss_pred             EeecccceecCCCCceeec-------cCcccccCHHHHcC-CCCCCccchHHHHHHHHHHHhCC---CCCCCCCHHHHHH
Confidence            9999999988764322110       011111 1333332 22344567777776666665432   2334444444443


Q ss_pred             H
Q 013370          158 K  158 (444)
Q Consensus       158 ~  158 (444)
                      .
T Consensus       239 ~  239 (352)
T d1koba_         239 N  239 (352)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=6.1e-09  Score=101.07  Aligned_cols=116  Identities=17%  Similarity=0.072  Sum_probs=78.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.++.....+.+        +.       ....++..++.+ +..+|..|++|+|.+|.||+++.+|++.++
T Consensus        82 mEy~~~g~L~~~i~~~~~~~--------e~-------~~~~~~~qi~~a-l~ylH~~~iiHrDikp~NiL~~~~~~~kl~  145 (320)
T d1xjda_          82 MEYLNGGDLMYHIQSCHKFD--------LS-------RATFYAAEIILG-LQFLHSKGIVYRDLKLDNILLDKDGHIKIA  145 (320)
T ss_dssp             EECCTTCBHHHHHHHHSSCC--------HH-------HHHHHHHHHHHH-HHHHHHTTCBCCCCCGGGEEECTTSCEEEC
T ss_pred             EeecCCCcHHHHhhccCCCC--------HH-------HHHHHHHHHHHH-HHHHHhCCeeeccCcccceeecCCCceecc
Confidence            89999999999886543332        11       123455555554 889999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHH-HHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQS-LVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~-la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||+...+.......-.      ..+-..- ..+.+...+ .++.+|++.+.--+..++.
T Consensus       146 DFG~a~~~~~~~~~~~~------~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvilyemlt  198 (320)
T d1xjda_         146 DFGMCKENMLGDAKTNT------FCGTPDYIAPEILLGQK-YNHSVDWWSFGVLLYEMLI  198 (320)
T ss_dssp             CCTTCBCCCCTTCCBCC------CCSCGGGCCHHHHTTCC-BCTHHHHHHHHHHHHHHHH
T ss_pred             ccchhhhcccccccccc------cCCCCCcCCHHHHcCCC-CCchhhhhhhhHHHHHHHh
Confidence            99999877643221100      0111111 245554433 4456788888777776664

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=8e-09  Score=98.77  Aligned_cols=75  Identities=24%  Similarity=0.418  Sum_probs=58.3

Q ss_pred             CCCcCCCCcccHHhhcC-CCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLST-GSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~-G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      |||++|+.|.++..... +++        +.+       ...++..++.+ +..+|..|++|+|++|.||+++.+|++.+
T Consensus        88 mEy~~~g~L~~~~~~~~~~l~--------e~~-------~~~i~~qi~~g-L~ylH~~~ivHrDiKp~NIll~~~~~~Kl  151 (288)
T d2jfla1          88 IEFCAGGAVDAVMLELERPLT--------ESQ-------IQVVCKQTLDA-LNYLHDNKIIHRDLKAGNILFTLDGDIKL  151 (288)
T ss_dssp             EECCTTEEHHHHHHHHTSCCC--------HHH-------HHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEECTTSCEEE
T ss_pred             EecCCCCcHHHHHHhcCCCCC--------HHH-------HHHHHHHHHHH-HHHHHHCCEEEeecChhheeECCCCCEEE
Confidence            89999999998754332 232        111       23455565555 78899999999999999999999999999


Q ss_pred             Eecccccccchh
Q 013370           80 LDFGLLCRMERK   91 (444)
Q Consensus        80 LDFGmv~~L~~~   91 (444)
                      +|||+...+...
T Consensus       152 ~DFG~a~~~~~~  163 (288)
T d2jfla1         152 ADFGVSAKNTRT  163 (288)
T ss_dssp             CCCTTCEECHHH
T ss_pred             EechhhhccCCC
Confidence            999998877654

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=4e-09  Score=99.89  Aligned_cols=135  Identities=16%  Similarity=0.180  Sum_probs=73.0

Q ss_pred             CCCcCCCCcccHHhhc--CCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcC-----ccccCCCCCCeEEcc
Q 013370            1 MEWMVGESPTDLISLS--TGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETG-----ILHADPHPGNLRYTS   73 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~--~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~G-----fFHADPHPGNILv~~   73 (444)
                      |||++|++|.++....  .+..      +++.       ....++..++.+ ++.+|..|     ++|+|++|.||+++.
T Consensus        84 mEy~~~g~L~~~i~~~~~~~~~------l~e~-------~~~~i~~qi~~a-l~ylH~~~~~~~~IiHrDiKp~NIll~~  149 (269)
T d2java1          84 MEYCEGGDLASVITKGTKERQY------LDEE-------FVLRVMTQLTLA-LKECHRRSDGGHTVLHRDLKPANVFLDG  149 (269)
T ss_dssp             EECCTTEEHHHHHHHHHHHTCC------CCHH-------HHHHHHHHHHHH-HHHHHHHCC---------CCGGGEEECT
T ss_pred             EecCCCCcHHHHHHhccccCCC------CCHH-------HHHHHHHHHHHH-HHHHHHhcCCCCCEEeCcCchhhcCcCC
Confidence            8999999999987531  1100      1111       233555566555 78888866     999999999999999


Q ss_pred             CCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHhchhccCCCCcccHH
Q 013370           74 SGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFS  153 (444)
Q Consensus        74 DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~~~~~~~~l~~~~f~  153 (444)
                      +|.+.+.|||+...++......  ....  -...| ...|.+.. +-.++..|++.+.--+..++..   ..+....+..
T Consensus       150 ~~~vkl~DFG~a~~~~~~~~~~--~~~~--gt~~Y-~APE~l~~-~~~~~~~DIwSlGvilyel~tg---~~Pf~~~~~~  220 (269)
T d2java1         150 KQNVKLGDFGLARILNHDTSFA--KAFV--GTPYY-MSPEQMNR-MSYNEKSDIWSLGCLLYELCAL---MPPFTAFSQK  220 (269)
T ss_dssp             TSCEEECCHHHHHHC---------------CCCSC-CCHHHHTT-CCCCHHHHHHHHHHHHHHHHHS---SCSCCCSSHH
T ss_pred             CCcEEEeeccceeecccCCCcc--ccCC--CCccc-CCHHHHcC-CCCChHHHHHhhCHHHHHHhhC---CCCCCCCCHH
Confidence            9999999999998886643221  1100  01112 12344432 2233456777777666666543   1233444444


Q ss_pred             HHHHH
Q 013370          154 RVLGK  158 (444)
Q Consensus       154 ~ll~~  158 (444)
                      ++...
T Consensus       221 ~~~~~  225 (269)
T d2java1         221 ELAGK  225 (269)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            44433

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=5.4e-09  Score=99.24  Aligned_cols=119  Identities=19%  Similarity=0.250  Sum_probs=75.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+......+++        +.       ....++..++.+ ++.+|..|++|+|++|.||+++.+|++.++
T Consensus        82 mEy~~gg~L~~~l~~~~~l~--------e~-------~~~~i~~qi~~a-l~ylH~~~IiHrDiKp~NILl~~~~~~KL~  145 (271)
T d1nvra_          82 LEYCSGGELFDRIEPDIGMP--------EP-------DAQRFFHQLMAG-VVYLHGIGITHRDIKPENLLLDERDNLKIS  145 (271)
T ss_dssp             EECCTTEEGGGGSBTTTBCC--------HH-------HHHHHHHHHHHH-HHHHHHTTEECSCCCGGGEEECTTCCEEEC
T ss_pred             EeccCCCcHHHHHhcCCCCC--------HH-------HHHHHHHHHHHH-HHHHHHcCCccCcccHHHEEECCCCCEEEc
Confidence            89999999998865322222        21       123556666665 788999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHH-HHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQ-SLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~-~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||+...++..........    ..+... ...|.+..-.+.+...|++++.--+..++.
T Consensus       146 DFG~a~~~~~~~~~~~~~~----~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~  201 (271)
T d1nvra_         146 DFGLATVFRYNNRERLLNK----MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA  201 (271)
T ss_dssp             CCTTCEECEETTEECCBCC----CCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHH
T ss_pred             cchhheeeccCCccccccc----eeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHh
Confidence            9999988765432211100    001111 123444333333334567766666655554

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=98.63  E-value=1.3e-08  Score=96.87  Aligned_cols=76  Identities=20%  Similarity=0.356  Sum_probs=61.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|++|.+++....+++        ++       ....++..++++ +..+|+.|++|+|++|.||+++.+|.+.++
T Consensus        89 mE~~~~g~L~~~l~~~~~l~--------e~-------~~~~~~~qi~~a-l~~lH~~~ivHrDlkp~Nill~~~~~~kl~  152 (277)
T d1phka_          89 FDLMKKGELFDYLTEKVTLS--------EK-------ETRKIMRALLEV-ICALHKLNIVHRDLKPENILLDDDMNIKLT  152 (277)
T ss_dssp             EECCTTCBHHHHHHHHSSCC--------HH-------HHHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEECTTCCEEEC
T ss_pred             EEcCCCchHHHHHHhcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHcCCcccccccceEEEcCCCCeEEc
Confidence            89999999999987544333        11       123455555555 888999999999999999999999999999


Q ss_pred             ecccccccchhh
Q 013370           81 DFGLLCRMERKH   92 (444)
Q Consensus        81 DFGmv~~L~~~~   92 (444)
                      |||....+++..
T Consensus       153 DFG~a~~~~~~~  164 (277)
T d1phka_         153 DFGFSCQLDPGE  164 (277)
T ss_dssp             CCTTCEECCTTC
T ss_pred             cchheeEccCCC
Confidence            999999887643

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=8.1e-09  Score=99.83  Aligned_cols=115  Identities=19%  Similarity=0.232  Sum_probs=75.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHH-cCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLE-TGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~-~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      |||++|+.|.++..-...++        +.       ....++..++.+ +..+|+ +|++|+|++|.||+++.+|++.+
T Consensus        83 mEy~~gg~L~~~l~~~~~l~--------~~-------~~~~~~~qil~a-L~yLH~~~~IiHRDiKP~NILl~~~~~vkl  146 (322)
T d1s9ja_          83 MEHMDGGSLDQVLKKAGRIP--------EQ-------ILGKVSIAVIKG-LTYLREKHKIMHRDVKPSNILVNSRGEIKL  146 (322)
T ss_dssp             EECCTTEEHHHHHHHHSSCC--------HH-------HHHHHHHHHHHH-HHHHHHHHCCCCSCCSGGGEEECTTCCEEE
T ss_pred             EEcCCCCcHHHHHhhcCCCC--------HH-------HHHHHHHHHHHH-HHHHHHhCCEEccccCHHHeeECCCCCEEE
Confidence            89999999999876433222        11       123455555554 788886 69999999999999999999999


Q ss_pred             EecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           80 LDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        80 LDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      +|||+...+.+.....++      -+..|. ..|.+... -.++..|++.+.--+..++.
T Consensus       147 ~DFGla~~~~~~~~~~~~------GT~~Y~-APEvl~~~-~y~~~~DiWSlGvil~ell~  198 (322)
T d1s9ja_         147 CDFGVSGQLIDSMANSFV------GTRSYM-SPERLQGT-HYSVQSDIWSMGLSLVEMAV  198 (322)
T ss_dssp             CCCCCCHHHHHHTC---C------CSSCCC-CHHHHHCS-CCCTTHHHHHHHHHHHHHHH
T ss_pred             eeCCCccccCCCcccccc------CCcccc-CchHHcCC-CCCcHHHHHHHHHHHHHHHH
Confidence            999999877665433321      122232 24555432 34456677777666665553

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.59  E-value=1e-08  Score=97.34  Aligned_cols=119  Identities=13%  Similarity=0.118  Sum_probs=74.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.++......++        ..+       ...++..++.+ +..+|..|++|+|++|.||+++.+|.+.+.
T Consensus        86 mE~~~~g~L~~~l~~~~~l~--------~~~-------~~~i~~qi~~g-l~ylH~~~iiHrDlKp~Nill~~~~~~kl~  149 (277)
T d1xbba_          86 MEMAELGPLNKYLQQNRHVK--------DKN-------IIELVHQVSMG-MKYLEESNFVHRDLAARNVLLVTQHYAKIS  149 (277)
T ss_dssp             EECCTTEEHHHHHHHCTTCC--------HHH-------HHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEEEETTEEEEC
T ss_pred             EEcCCCCcHHHHHhhccCCC--------HHH-------HHHHHHHHHHH-HhhHHhCCcccCCCcchhhcccccCccccc
Confidence            89999999999876432222        222       23455555554 888999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHH-HHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQ-SLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~-~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||+...+...........   ...+... ...+.+.. +..++..|+++|.--+.+++.
T Consensus       150 DFGla~~~~~~~~~~~~~~---~~~gt~~y~APE~l~~-~~~~~~sDiwS~Gv~l~ellt  205 (277)
T d1xbba_         150 DFGLSKALRADENYYKAQT---HGKWPVKWYAPECINY-YKFSSKSDVWSFGVLMWEAFS  205 (277)
T ss_dssp             CCTTCEECCTTCSEEEC-------CCCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHT
T ss_pred             chhhhhhcccccccccccc---ccCCCceecCchhhcC-CCCCchhhhccchhhhhHHhh
Confidence            9999987754322110000   0001110 11233332 223345677777766666553

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.58  E-value=4.1e-08  Score=92.31  Aligned_cols=120  Identities=18%  Similarity=0.326  Sum_probs=74.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.+.......++        ++       ....++..++.+ +..+|..|++|+|++|.||+++.+|...+.
T Consensus        90 mE~~~g~~L~~~~~~~~~l~--------~~-------~~~~i~~qi~~a-l~~lH~~~iiHrDiKP~NIll~~~~~~~l~  153 (277)
T d1o6ya_          90 MEYVDGVTLRDIVHTEGPMT--------PK-------RAIEVIADACQA-LNFSHQNGIIHRDVKPANIMISATNAVKVM  153 (277)
T ss_dssp             EECCCEEEHHHHHHHHCSCC--------HH-------HHHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEEETTSCEEEC
T ss_pred             EECCCCCEehhhhcccCCCC--------HH-------HHHHHHHHHHHH-HHHHHhCCccCccccCcccccCccccceee
Confidence            89999999988765433222        11       123566666665 889999999999999999999999999999


Q ss_pred             ecccccccchhhHHhH-HHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHhc
Q 013370           81 DFGLLCRMERKHQFAM-LASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGE  140 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l-~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~~  140 (444)
                      |||....+........ .....+  ...|. ..|.+.. +-..+..|++.+.--+..++..
T Consensus       154 d~~~~~~~~~~~~~~~~~~~~~G--t~~Y~-aPE~~~~-~~~~~~~DiwSlGvilyelltG  210 (277)
T d1o6ya_         154 DFGIARAIADSGNSVTQTAAVIG--TAQYL-SPEQARG-DSVDARSDVYSLGCVLYEVLTG  210 (277)
T ss_dssp             CCTTCEECC------------------TTC-CHHHHTT-CCCCHHHHHHHHHHHHHHHHHS
T ss_pred             hhhhhhhhccccccccccccccC--ccccc-CHHHHcC-CCCCcceecccchHHHHHHHhC
Confidence            9999887655432211 111111  11221 1344432 2334456777776666666543

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=2e-08  Score=97.36  Aligned_cols=117  Identities=22%  Similarity=0.267  Sum_probs=74.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccC--CcEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS--GQIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~D--GrLv   78 (444)
                      |||++|+.|.+...... .+      +++++       ...++..++.+ ++.||..|++|+|++|.||+++.+  +++.
T Consensus        80 mE~~~gg~L~~~i~~~~-~~------l~e~~-------~~~i~~qi~~a-l~yLH~~~iiHrDlKp~NIll~~~~~~~ik  144 (321)
T d1tkia_          80 FEFISGLDIFERINTSA-FE------LNERE-------IVSYVHQVCEA-LQFLHSHNIGHFDIRPENIIYQTRRSSTIK  144 (321)
T ss_dssp             ECCCCCCBHHHHHTSSS-CC------CCHHH-------HHHHHHHHHHH-HHHHHHTTEECCCCCGGGEEESSSSCCCEE
T ss_pred             EecCCCCcHHHHHHhcC-CC------CCHHH-------HHHHHHHHHHH-HHHHHHcCCCcccccccceeecCCCceEEE
Confidence            89999999998775332 11      12221       23455555555 889999999999999999999865  4899


Q ss_pred             EEecccccccchhhHHhHHHHHHHHHhCCHHHH-HHHHHhcCCCCCCCChHHHHHHHHHHHhc
Q 013370           79 FLDFGLLCRMERKHQFAMLASIVHIVNGDWQSL-VHSLTEMDVVRPGTNTLRVTMDLEDALGE  140 (444)
Q Consensus        79 lLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~l-a~~l~~lG~l~~~~d~~~~~~~L~~~l~~  140 (444)
                      ++|||....+.........       ..-..-+ .+.+.. +...+..|++.+.--+..++..
T Consensus       145 l~DFG~~~~~~~~~~~~~~-------~~t~~y~ape~~~~-~~~~~~~DiWSlGvily~ll~G  199 (321)
T d1tkia_         145 IIEFGQARQLKPGDNFRLL-------FTAPEYYAPEVHQH-DVVSTATDMWSLGTLVYVLLSG  199 (321)
T ss_dssp             ECCCTTCEECCTTCEEEEE-------ESCGGGSCHHHHTT-CEECHHHHHHHHHHHHHHHHHS
T ss_pred             EcccchhhccccCCccccc-------ccccccccchhccC-CCCCchhhcccHHHHHHHHHhC
Confidence            9999999887654322100       0111111 233322 2334556888877666666643

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=2.9e-08  Score=94.40  Aligned_cols=116  Identities=15%  Similarity=0.206  Sum_probs=77.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCC----c
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG----Q   76 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DG----r   76 (444)
                      |||++|+.|.++.....+++        +.       ....++..++.+ +..||..|++|+|++|.||+++.+|    +
T Consensus        92 ~E~~~gg~L~~~i~~~~~l~--------~~-------~~~~~~~qi~~a-l~yLH~~~ivHrDiKp~Nill~~~~~~~~~  155 (293)
T d1jksa_          92 LELVAGGELFDFLAEKESLT--------EE-------EATEFLKQILNG-VYYLHSLQIAHFDLKPENIMLLDRNVPKPR  155 (293)
T ss_dssp             EECCCSCBHHHHHHHHSSCC--------HH-------HHHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEESCSSSSSCC
T ss_pred             EEcCCCccccchhccccccc--------hh-------HHHHHHHHHHHH-HHhhhhcceeecccccceEEEecCCCcccc
Confidence            89999999999876543332        11       123556666655 8889999999999999999999876    5


Q ss_pred             EEEEecccccccchhhHHhHHHHHHHHHhCCH-HHHHHHHHhcCCCCCCCChHHHHHHHHHHHhc
Q 013370           77 IGFLDFGLLCRMERKHQFAMLASIVHIVNGDW-QSLVHSLTEMDVVRPGTNTLRVTMDLEDALGE  140 (444)
Q Consensus        77 LvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~-~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~~  140 (444)
                      +.++|||+...++......-       ..+.. ....+.+.. +...+..|++.+.--+..++..
T Consensus       156 vkl~DfG~a~~~~~~~~~~~-------~~~t~~y~APE~~~~-~~~~~~~DiwSlGvilyell~g  212 (293)
T d1jksa_         156 IKIIDFGLAHKIDFGNEFKN-------IFGTPEFVAPEIVNY-EPLGLEADMWSIGVITYILLSG  212 (293)
T ss_dssp             EEECCCTTCEECTTSCBCSC-------CCCCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHS
T ss_pred             eEecchhhhhhcCCCccccc-------cCCCCcccCHHHHcC-CCCCCcccchhhhHHHHHHHcC
Confidence            99999999988865432210       01111 122344432 3345567888777666666543

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=98.53  E-value=3.5e-08  Score=96.91  Aligned_cols=116  Identities=17%  Similarity=0.265  Sum_probs=74.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEcc--CCcEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTS--SGQIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~--DGrLv   78 (444)
                      |||++|+.|.+......|.       +++.       ....++..++.+ +..||..|++|+|++|.||+++.  +|++.
T Consensus       102 mE~~~gg~L~~~l~~~~~~-------l~e~-------~~~~i~~qi~~a-L~ylH~~~iiHrDiKp~NIll~~~~~~~vk  166 (350)
T d1koaa2         102 YEFMSGGELFEKVADEHNK-------MSED-------EAVEYMRQVCKG-LCHMHENNYVHLDLKPENIMFTTKRSNELK  166 (350)
T ss_dssp             ECCCCSCBHHHHHTCTTSC-------BCHH-------HHHHHHHHHHHH-HHHHHHTTEECCCCCGGGEEESSTTSCCEE
T ss_pred             EEcCCCCCHHHHHHhhcCC-------CCHH-------HHHHHHHHHHHH-HHHHHhcCCeeeeechhHeeeccCCCCeEE
Confidence            8999999998876432210       1121       123566666666 88899999999999999999974  58999


Q ss_pred             EEecccccccchhhHHh-HHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           79 FLDFGLLCRMERKHQFA-MLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        79 lLDFGmv~~L~~~~R~~-l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      ++|||+...+++..... ...      ...| ...|.+..-+ .....|++.+.--+..++.
T Consensus       167 L~DFG~a~~~~~~~~~~~~~g------T~~Y-~aPEv~~~~~-~~~~~DiwSlGvilyell~  220 (350)
T d1koaa2         167 LIDFGLTAHLDPKQSVKVTTG------TAEF-AAPEVAEGKP-VGYYTDMWSVGVLSYILLS  220 (350)
T ss_dssp             ECCCTTCEECCTTSCEEEECS------CTTT-CCHHHHHTCC-BCHHHHHHHHHHHHHHHHH
T ss_pred             EeecchheecccccccceecC------cccc-cCHHHHcCCC-CChhHhhhhhhHHHHHHHh
Confidence            99999999887643221 100      0111 1134443322 2344677777666666554

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=9.1e-08  Score=89.56  Aligned_cols=119  Identities=14%  Similarity=0.160  Sum_probs=68.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.++.......       ++.++       ...++..++.+ +..++..|++|+|++|.||+++.+|.+.+.
T Consensus        79 ~E~~~~g~L~~~l~~~~~~-------~~~~~-------~~~i~~qia~g-l~~lH~~~iiHrDlKp~Nill~~~~~~Kl~  143 (263)
T d1sm2a_          79 FEFMEHGCLSDYLRTQRGL-------FAAET-------LLGMCLDVCEG-MAYLEEACVIHRDLAARNCLVGENQVIKVS  143 (263)
T ss_dssp             EECCTTCBHHHHHHTTTTC-------CCHHH-------HHHHHHHHHHH-HHHHHHTTCCCTTCSGGGEEECGGGCEEEC
T ss_pred             EEecCCCcHHHHhhccccC-------CCHHH-------HHHHHHHHHHH-HHhhhccceeecccchhheeecCCCCeEec
Confidence            8999999999986532211       11222       23455555555 788999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||+...+...........   ...-.| ...|.+.. +-.++..|++.|.--+.+++.
T Consensus       144 DFGla~~~~~~~~~~~~~~---~gt~~y-~aPE~l~~-~~~~~k~DVwS~Gvil~el~t  197 (263)
T d1sm2a_         144 DFGMTRFVLDDQYTSSTGT---KFPVKW-ASPEVFSF-SRYSSKSDVWSFGVLMWEVFS  197 (263)
T ss_dssp             SCC---------------------CTTS-CCHHHHTT-CCCCHHHHHHHHHHHHHHHHT
T ss_pred             ccchheeccCCCceeecce---ecCccc-CChHHhcC-CCCCchhhhcchHHHHHHHHH
Confidence            9999887765433221110   000111 12444433 233445677777766666653

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.50  E-value=3.4e-08  Score=94.08  Aligned_cols=119  Identities=16%  Similarity=0.060  Sum_probs=75.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.+.+.........      .+..+       ...++..++.+ +..||..|++|+|++|.||+++.+|.+.+.
T Consensus        92 ~E~~~~g~l~~~l~~~~~~~------~~~~~-------~~~i~~qi~~g-L~yLH~~~iiHrDlKp~NILl~~~~~~Kl~  157 (287)
T d1opja_          92 TEFMTYGNLLDYLRECNRQE------VSAVV-------LLYMATQISSA-MEYLEKKNFIHRDLAARNCLVGENHLVKVA  157 (287)
T ss_dssp             EECCTTCBHHHHHHHSCTTT------SCHHH-------HHHHHHHHHHH-HHHHHHTTCCCSCCSGGGEEECGGGCEEEC
T ss_pred             eecccCcchHHHhhhccccc------hHHHH-------HHHHHHHHHHH-HHHHHHCCcccCccccCeEEECCCCcEEEc
Confidence            89999999998875432111      11222       23455555544 889999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCH-HHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDW-QSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~-~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||+...++.........     ..+.. ....+.+.. +-.++..|++.+.--+..++.
T Consensus       158 DFG~a~~~~~~~~~~~~~-----~~g~~~y~aPE~~~~-~~~~~k~DiwS~Gv~l~ell~  211 (287)
T d1opja_         158 DFGLSRLMTGDTYTAHAG-----AKFPIKWTAPESLAY-NKFSIKSDVWAFGVLLWEIAT  211 (287)
T ss_dssp             CCCCTTTCCSSSSEEETT-----EEECGGGCCHHHHHH-CCCSHHHHHHHHHHHHHHHHT
T ss_pred             cccceeecCCCCceeecc-----ccccccccChHHHcC-CCCCchhhhhhHHHHHHHHHh
Confidence            999998776543221110     00111 112333333 333445677777666666553

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=3.2e-08  Score=93.79  Aligned_cols=76  Identities=20%  Similarity=0.275  Sum_probs=55.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|++|.++.....+       .++..+       ...++..++.+ +..||..|++|+|++|.||+++.+|.+.+.
T Consensus        82 ~Ey~~~g~L~~~l~~~~~-------~~~~~~-------~~~i~~qi~~g-l~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~  146 (276)
T d1uwha_          82 TQWCEGSSLYHHLHIIET-------KFEMIK-------LIDIARQTAQG-MDYLHAKSIIHRDLKSNNIFLHEDLTVKIG  146 (276)
T ss_dssp             EECCCEEEHHHHHHTSCC-------CCCHHH-------HHHHHHHHHHH-HHHHHHTTCCCSCCCGGGEEEETTSSEEEC
T ss_pred             EecCCCCCHHHHHhhccC-------CCCHHH-------HHHHHHHHHHH-HHHHhcCCEeccccCHHHEEEcCCCCEEEc
Confidence            899999999998754321       112222       23455555544 888999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...++..
T Consensus       147 DFGla~~~~~~  157 (276)
T d1uwha_         147 DFGLATVKSRW  157 (276)
T ss_dssp             CCCCSCC----
T ss_pred             cccceeecccc
Confidence            99998877654

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=6.2e-08  Score=90.97  Aligned_cols=118  Identities=16%  Similarity=0.083  Sum_probs=66.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.+.++.....+.       ++..+       ...++..++.+ +..++..|++|+|++|.||+++.+|.+.+.
T Consensus        86 ~E~~~~g~l~~~~~~~~~~-------l~~~~-------~~~~~~qi~~g-l~ylH~~~iiHrDlKp~NIll~~~~~~Kl~  150 (273)
T d1mp8a_          86 MELCTLGELRSFLQVRKYS-------LDLAS-------LILYAYQLSTA-LAYLESKRFVHRDIAARNVLVSSNDCVKLG  150 (273)
T ss_dssp             EECCTTEEHHHHHHHTTTT-------SCHHH-------HHHHHHHHHHH-HHHHHHTTCCCSCCSGGGEEEEETTEEEEC
T ss_pred             EEeccCCcHHhhhhccCCC-------CCHHH-------HHHHHHHHHHH-hhhhcccCeeccccchhheeecCCCcEEEc
Confidence            7999999998876543210       11222       23455555555 788999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHHH-HHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQSL-VHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~l-a~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||+...++......-..     ..+-+.-+ .+.+. -+..++..|+++|.--+.+++.
T Consensus       151 DfG~a~~~~~~~~~~~~~-----~~gt~~y~apE~l~-~~~~~~~~DiwSlGvil~e~lt  204 (273)
T d1mp8a_         151 DFGLSRYMEDSTYYKASK-----GKLPIKWMAPESIN-FRRFTSASDVWMFGVCMWEILM  204 (273)
T ss_dssp             C------------------------CCGGGCCHHHHH-HCCCSHHHHHHHHHHHHHHHHT
T ss_pred             cchhheeccCCcceeccc-----eecCcccchhhHhc-cCCCCCccccccchHHHHHHHh
Confidence            999998876543221110     01111112 33333 2344455788888776666553

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=6.2e-08  Score=92.39  Aligned_cols=119  Identities=16%  Similarity=0.133  Sum_probs=72.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.+.++.....+            ...+.. .+..++..++.+ +..||..|++|+|++|.||+++.+|.+.+.
T Consensus        90 ~Ey~~~g~l~~~~~~~~~------------~~l~~~-~~~~i~~~i~~g-l~~LH~~~ivH~DlKp~NIll~~~~~~kl~  155 (285)
T d1fmka3          90 TEYMSKGSLLDFLKGETG------------KYLRLP-QLVDMAAQIASG-MAYVERMNYVHRDLRAANILVGENLVCKVA  155 (285)
T ss_dssp             ECCCTTCBHHHHHSHHHH------------TTCCHH-HHHHHHHHHHHH-HHHHHHTTCCCSCCSGGGEEECGGGCEEEC
T ss_pred             EEecCCCchhhhhhhccc------------ccchHH-HHHHHHHHHHHH-HHHHhhhheecccccceEEEECCCCcEEEc
Confidence            899999998887654310            011111 123555555555 899999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHH-HHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQ-SLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~-~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||+...+++........     ..+.+. ...+.+.. +-.++..|+..|.--+..++.
T Consensus       156 DfGla~~~~~~~~~~~~~-----~~gt~~y~aPE~~~~-~~~~~ksDI~S~Giil~el~t  209 (285)
T d1fmka3         156 DFGLARLIEDNEYTARQG-----AKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTT  209 (285)
T ss_dssp             CCCTTC-------------------CCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHT
T ss_pred             ccchhhhccCCCceeecc-----ccccccccChHHHhC-CCCCcHHhhhcchHHHHHHHh
Confidence            999988775543222110     011111 12344443 444566788887776766653

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=1.1e-07  Score=89.87  Aligned_cols=120  Identities=13%  Similarity=0.111  Sum_probs=67.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..+.+......+.       ++..+       ...++..++. .+..+|..|++|+|++|.||+++.+|.+.+.
T Consensus        88 ~e~~~~~~l~~~~~~~~~~-------~~~~~-------~~~i~~~i~~-gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~  152 (283)
T d1mqba_          88 TEYMENGALDKFLREKDGE-------FSVLQ-------LVGMLRGIAA-GMKYLANMNYVHRDLAARNILVNSNLVCKVS  152 (283)
T ss_dssp             EECCTTEEHHHHHHHTTTC-------SCHHH-------HHHHHHHHHH-HHHHHHHTTCCCSCCCGGGEEECTTCCEEEC
T ss_pred             EEecccCcchhhhhccccc-------ccHHH-------HHHHHHHHHH-hhhhccccccccCccccceEEECCCCeEEEc
Confidence            7899998888866533211       11222       2244444443 4889999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHH-HHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQ-SLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~-~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||+...+..........   ....+... ...|.+. -+..++..|+..|.--+.+++.
T Consensus       153 DFGla~~~~~~~~~~~~~---~~~~gt~~Y~APE~l~-~~~~~~~sDI~S~Gvil~el~t  208 (283)
T d1mqba_         153 DFGLSRVLEDDPEATYTT---SGGKIPIRWTAPEAIS-YRKFTSASDVWSFGIVMWEVMT  208 (283)
T ss_dssp             CCCC--------------------CCCGGGSCHHHHH-SCCCCHHHHHHHHHHHHHHHHT
T ss_pred             ccchhhcccCCCccceEe---ccCCCCccccCHHHHc-cCCCCCcccccccHHHHHHHHh
Confidence            999998876543332111   00111111 1234332 3344445677777666666553

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=4.2e-08  Score=93.60  Aligned_cols=132  Identities=12%  Similarity=0.139  Sum_probs=80.5

Q ss_pred             CCCcCCCCcccHHhhcC--CCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEE
Q 013370            1 MEWMVGESPTDLISLST--GSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~--G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLv   78 (444)
                      |||++|+.+.+++....  +..........+.+++.. .....++..++.+ ++.++..|++|+|++|.||+++.+|.+.
T Consensus        98 ~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~qi~~a-l~ylH~~~ivHrDiKp~NiLl~~~~~~k  175 (299)
T d1fgka_          98 VEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS-KDLVSCAYQVARG-MEYLASKKCIHRDLAARNVLVTEDNVMK  175 (299)
T ss_dssp             ECCCTTCBHHHHHHTTSCC------------CCCCCH-HHHHHHHHHHHHH-HHHHHHTTCCCSCCSGGGEEECTTCCEE
T ss_pred             EEccCCCcHHHHHHhhcCCccccccccccCccccCCH-HHHHHHHHHHHHH-HHHhhhCCEEeeeecccceeecCCCCeE
Confidence            89999999999986542  110000000011112221 1234566666666 7889999999999999999999999999


Q ss_pred             EEecccccccchhhHHhHHHHHHHHHhCCHHHH-HHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           79 FLDFGLLCRMERKHQFAMLASIVHIVNGDWQSL-VHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        79 lLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~l-a~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      +.|||+...++..........    ......-+ .+.+.. +..++..|+++|.--+..++.
T Consensus       176 l~dfg~~~~~~~~~~~~~~~~----~~~~~~y~aPE~l~~-~~y~~k~DiwS~Gvvl~ell~  232 (299)
T d1fgka_         176 IADFGLARDIHHIDYYKKTTN----GRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFT  232 (299)
T ss_dssp             ECSTTCCCCGGGCCTTCCCTT----SCCGGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHT
T ss_pred             eccchhhcccccccccccccc----CCCChhhhhhhHhcC-CCCCchhhhHHhHHHHHHhcc
Confidence            999999988866433221000    00111111 233333 555666788888777777663

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=6.8e-08  Score=91.33  Aligned_cols=75  Identities=19%  Similarity=0.159  Sum_probs=56.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcC--ccccCCCCCCeEEc-cCCcE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETG--ILHADPHPGNLRYT-SSGQI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~G--fFHADPHPGNILv~-~DGrL   77 (444)
                      |||++|+.|.++.......+        ..       ....++..++.+ +..||..|  ++|+|++|+||+++ ++|.+
T Consensus        91 mE~~~~g~L~~~l~~~~~~~--------~~-------~~~~~~~qi~~g-l~yLH~~~~~IiHrDiKp~NILl~~~~~~~  154 (270)
T d1t4ha_          91 TELMTSGTLKTYLKRFKVMK--------IK-------VLRSWCRQILKG-LQFLHTRTPPIIHRDLKCDNIFITGPTGSV  154 (270)
T ss_dssp             EECCCSCBHHHHHHHHSSCC--------HH-------HHHHHHHHHHHH-HHHHHTSSSCCCCSCCCGGGEEESSTTSCE
T ss_pred             EeCCCCCcHHHHHhcccccc--------HH-------HHHHHHHHHHHH-HHHHHHCCCCEEeCCcChhhceeeCCCCCE
Confidence            89999999998876432222        11       123455555555 77889988  99999999999997 58999


Q ss_pred             EEEecccccccchh
Q 013370           78 GFLDFGLLCRMERK   91 (444)
Q Consensus        78 vlLDFGmv~~L~~~   91 (444)
                      .++|||+....+..
T Consensus       155 Kl~DFGla~~~~~~  168 (270)
T d1t4ha_         155 KIGDLGLATLKRAS  168 (270)
T ss_dssp             EECCTTGGGGCCTT
T ss_pred             EEeecCcceeccCC
Confidence            99999998765543

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.44  E-value=5.7e-08  Score=93.68  Aligned_cols=113  Identities=16%  Similarity=0.227  Sum_probs=75.2

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.+........+++        +.+       ...++..++.+ +..||..|++|+|++|.||+++.+|.+.+.
T Consensus        94 ~E~~~~g~l~~~~~~~~~l~--------e~~-------~~~i~~qi~~a-L~yLH~~~iiHrDiKp~NILl~~~~~~Kl~  157 (309)
T d1u5ra_          94 MEYCLGSASDLLEVHKKPLQ--------EVE-------IAAVTHGALQG-LAYLHSHNMIHRDVKAGNILLSEPGLVKLG  157 (309)
T ss_dssp             EECCSEEHHHHHHHHTSCCC--------HHH-------HHHHHHHHHHH-HHHHHHTTCBCCCCSGGGEEEETTTEEEEC
T ss_pred             EEecCCCchHHHHHhCCCCC--------HHH-------HHHHHHHHHHH-HHHHHhCCEeccCCCcceEEECCCCCEEEe
Confidence            89999998876554433332        111       23455555554 888999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHH-HHHHHHHhc--CCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQ-SLVHSLTEM--DVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~-~la~~l~~l--G~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||+..........          .+... ...|.+...  +-.++..|++.+.--+..++.
T Consensus       158 DFG~a~~~~~~~~~----------~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~  209 (309)
T d1u5ra_         158 DFGSASIMAPANSF----------VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE  209 (309)
T ss_dssp             CCTTCBSSSSBCCC----------CSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHH
T ss_pred             ecccccccCCCCcc----------ccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHH
Confidence            99999877654321          12211 224555322  233445678877766666654

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=7.3e-08  Score=93.07  Aligned_cols=131  Identities=14%  Similarity=0.069  Sum_probs=75.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchh---------hHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHL---------DRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRY   71 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~---------~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv   71 (444)
                      |||++|+.|.+++....+.-.+.-..+.         ....++. .....++..++.+ +..||..|++|+|++|.||++
T Consensus       120 ~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~i~~qi~~g-l~yLH~~~IiHRDlKp~Nill  197 (325)
T d1rjba_         120 FEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTF-EDLLCFAYQVAKG-MEFLEFKSCVHRDLAARNVLV  197 (325)
T ss_dssp             EECCTTCBHHHHHHTTTTCC---------------------CCH-HHHHHHHHHHHHH-HHHHHHTTEEETTCSGGGEEE
T ss_pred             EEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCH-HHHHHHHHHHHHH-HHHHHhCCeeeccCchhcccc
Confidence            8999999999988654211000000000         0011111 1233455555554 888999999999999999999


Q ss_pred             ccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCH-HHHHHHHHhcCCCCCCCChHHHHHHHHHHH
Q 013370           72 TSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDW-QSLVHSLTEMDVVRPGTNTLRVTMDLEDAL  138 (444)
Q Consensus        72 ~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~-~~la~~l~~lG~l~~~~d~~~~~~~L~~~l  138 (444)
                      +.+|.+.+.|||+...+...........    ..+.. -...+.+.. +..++..|+++|.--+..++
T Consensus       198 ~~~~~~Kl~DFGla~~~~~~~~~~~~~~----~~gt~~y~aPE~l~~-~~~~~~~DiwS~Gvil~eml  260 (325)
T d1rjba_         198 THGKVVKICDFGLARDIMSDSNYVVRGN----ARLPVKWMAPESLFE-GIYTIKSDVWSYGILLWEIF  260 (325)
T ss_dssp             ETTTEEEECCCGGGSCGGGCTTSEEETT----EEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHT
T ss_pred             ccCCeEEEeeccccccccCCCceeeecc----ccCCCccCChHHHcC-CCCCcceeccchhHHHHHHH
Confidence            9999999999999887665432211000    00000 111333332 33445567787776666665

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=4.4e-08  Score=92.96  Aligned_cols=88  Identities=15%  Similarity=0.132  Sum_probs=52.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCC-CCCC-chhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEE
Q 013370            1 MEWMVGESPTDLISLSTGSSV-DGSS-THLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~-~~i~-~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLv   78 (444)
                      |||++|+.|.++.....+... .... +......++. .....++..++.+ +..+|..|++|+|++|.||+++.+|.+.
T Consensus        97 ~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~qi~~g-l~ylH~~~ivHrDlKp~NILl~~~~~~K  174 (299)
T d1ywna1          97 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL-EHLICYSFQVAKG-MEFLASRKCIHRDLAARNILLSEKNVVK  174 (299)
T ss_dssp             EECCTTCBHHHHHHHTGGGBCC-----------CBCH-HHHHHHHHHHHHH-HHHHHHTTCCCSCCCGGGEEECGGGCEE
T ss_pred             EEecCCCcHHHHHHhccccccccccchhhhhcccCCH-HHHHHHHHHHHHH-HHHHHhCCCcCCcCCccceeECCCCcEE
Confidence            899999999999865421100 0000 0000011111 1223455555554 7889999999999999999999999999


Q ss_pred             EEecccccccch
Q 013370           79 FLDFGLLCRMER   90 (444)
Q Consensus        79 lLDFGmv~~L~~   90 (444)
                      +.|||+...+..
T Consensus       175 l~DFGla~~~~~  186 (299)
T d1ywna1         175 ICDFGLARDIYK  186 (299)
T ss_dssp             ECC------CCS
T ss_pred             EccCcchhhccc
Confidence            999999876654

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=3.7e-08  Score=92.83  Aligned_cols=77  Identities=26%  Similarity=0.387  Sum_probs=57.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+......+            .+++.. ....++..++++ +..+|..|++|+|++|.||+++.+|.+.+.
T Consensus        86 ~Ey~~~g~L~~~~~~~~~------------~~l~~~-~~~~i~~qi~~g-l~~lH~~~ivHrDiKp~NIll~~~~~~Kl~  151 (272)
T d1qpca_          86 TEYMENGSLVDFLKTPSG------------IKLTIN-KLLDMAAQIAEG-MAFIEERNYIHRDLRAANILVSDTLSCKIA  151 (272)
T ss_dssp             EECCTTCBHHHHTTSHHH------------HTCCHH-HHHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEECTTSCEEEC
T ss_pred             EEeCCCCcHHHHHhhcCC------------CCCCHH-HHHHHHHHHHHH-HHHHHhCCcccCccchhheeeecccceeec
Confidence            899999999886543211            111111 123555555554 888999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...+++.
T Consensus       152 DFGla~~~~~~  162 (272)
T d1qpca_         152 DFGLARLIEDN  162 (272)
T ss_dssp             CCTTCEECSSS
T ss_pred             cccceEEccCC
Confidence            99999887653

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=4.4e-08  Score=91.94  Aligned_cols=117  Identities=15%  Similarity=0.118  Sum_probs=75.4

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.+.+......+.       .+..       .+..++..++++ +..++..|++|+|++|.||+++.+|.+.+.
T Consensus        78 ~Ey~~~g~l~~~~~~~~~~-------~~~~-------~~~~i~~qi~~g-l~~LH~~~iiH~dlk~~Nill~~~~~~kl~  142 (258)
T d1k2pa_          78 TEYMANGCLLNYLREMRHR-------FQTQ-------QLLEMCKDVCEA-MEYLESKQFLHRDLAARNCLVNDQGVVKVS  142 (258)
T ss_dssp             EECCTTEEHHHHHHSGGGC-------CCHH-------HHHHHHHHHHHH-HHHHHHTTBCCSCCSGGGEEECTTCCEEEC
T ss_pred             EEccCCCcHHHhhhccccC-------CcHH-------HHHHHHHHHHHH-HHHHhhcCcccccccceeEEEcCCCcEEEC
Confidence            7999999988886543211       1111       123566555555 889999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHH-HHHHHHhcCCCCCCCChHHHHHHHHHHH
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQS-LVHSLTEMDVVRPGTNTLRVTMDLEDAL  138 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~-la~~l~~lG~l~~~~d~~~~~~~L~~~l  138 (444)
                      |||+...+.+.........     .+...- ..+.+.. +..++..|+++|..-+.+++
T Consensus       143 DfG~a~~~~~~~~~~~~~~-----~~t~~y~aPE~~~~-~~~~~ksDiwS~G~~l~el~  195 (258)
T d1k2pa_         143 DFGLSRYVLDDEYTSSVGS-----KFPVRWSPPEVLMY-SKFSSKSDIWAFGVLMWEIY  195 (258)
T ss_dssp             CCSSCCBCSSSSCCCCCCS-----CCCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHH
T ss_pred             cchhheeccCCCceeeccc-----CCCCCcCCcHHhcC-CCCCcceeecccchhhHhHH
Confidence            9999987765433221100     011111 1333333 33445677887776666655

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=7.1e-08  Score=91.91  Aligned_cols=76  Identities=17%  Similarity=0.156  Sum_probs=57.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|++|.++.....+       .++..+       ...++..++.+ +..++..|++|+|++|.||+++.+|.+.+.
T Consensus        87 mE~~~~g~L~~~l~~~~~-------~l~~~~-------~~~i~~qi~~g-L~ylH~~~iiHrDlKp~Nill~~~~~~Kl~  151 (285)
T d1u59a_          87 MEMAGGGPLHKFLVGKRE-------EIPVSN-------VAELLHQVSMG-MKYLEEKNFVHRDLAARNVLLVNRHYAKIS  151 (285)
T ss_dssp             EECCTTEEHHHHHTTCTT-------TSCHHH-------HHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEEEETTEEEEC
T ss_pred             EEeCCCCcHHHHhhcccc-------CCCHHH-------HHHHHHHHHHH-HHHHHhCCeecCcCchhheeeccCCceeec
Confidence            899999999997543221       112222       23455555544 888999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...+...
T Consensus       152 DFGla~~~~~~  162 (285)
T d1u59a_         152 DFGLSKALGAD  162 (285)
T ss_dssp             CCTTCEECTTC
T ss_pred             cchhhhccccc
Confidence            99999877653

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.39  E-value=8e-07  Score=84.85  Aligned_cols=73  Identities=19%  Similarity=0.203  Sum_probs=52.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHH--------cCccccCCCCCCeEEc
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLE--------TGILHADPHPGNLRYT   72 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~--------~GfFHADPHPGNILv~   72 (444)
                      |||++|+.|.+++... +.        +..+.       ..++...+.. +..+|.        .|++|+|++|.||+++
T Consensus        80 ~Ey~~~g~L~~~l~~~-~l--------~~~~~-------~~~~~~ia~g-l~~lH~~~~~~~~~~~IvHrDlKp~NILl~  142 (303)
T d1vjya_          80 SDYHEHGSLFDYLNRY-TV--------TVEGM-------IKLALSTASG-LAHLHMEIVGTQGKPAIAHRDLKSKNILVK  142 (303)
T ss_dssp             EECCTTCBHHHHHHHC-CB--------CHHHH-------HHHHHHHHHH-HHHHHCCBCSTTCBCEEECSCCCGGGEEEC
T ss_pred             EecccCCCHHHHHhcC-CC--------CHHHH-------HHHHHHHHHH-HHHHHHhhhhhccCCCeeccccCccceEEc
Confidence            8999999999988632 22        12222       2344433333 555664        5999999999999999


Q ss_pred             cCCcEEEEecccccccch
Q 013370           73 SSGQIGFLDFGLLCRMER   90 (444)
Q Consensus        73 ~DGrLvlLDFGmv~~L~~   90 (444)
                      .+|++.+.|||+...++.
T Consensus       143 ~~~~~Kl~DFGl~~~~~~  160 (303)
T d1vjya_         143 KNGTCCIADLGLAVRHDS  160 (303)
T ss_dssp             TTSCEEECCCTTCEEEET
T ss_pred             CCCCeEEEecCccccccC
Confidence            999999999998876643

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=5.8e-08  Score=92.13  Aligned_cols=118  Identities=19%  Similarity=0.178  Sum_probs=72.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..+..+.......+        +.+       ...++..++.+ ++.+|..|++|+|++|.||+++.+|.+.++
T Consensus        79 mE~~~~~~~~~~~~~~~~l~--------~~~-------~~~~~~qil~a-L~~lH~~~iiHrDiKp~NIli~~~~~~KL~  142 (299)
T d1ua2a_          79 FDFMETDLEVIIKDNSLVLT--------PSH-------IKAYMLMTLQG-LEYLHQHWILHRDLKPNNLLLDENGVLKLA  142 (299)
T ss_dssp             EECCSEEHHHHHTTCCSSCC--------SSH-------HHHHHHHHHHH-HHHHHHTTCCCCCCCGGGEEECTTCCEEEC
T ss_pred             hhhhcchHHhhhhhcccCCC--------HHH-------HHHHHHHHHHH-HHHhhccceecccCCcceEEecCCCccccc
Confidence            79999987665543222222        111       22455555554 888999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||+...++........    ......| ...+.+......+...|++.+.--+..++.
T Consensus       143 DFG~a~~~~~~~~~~~~----~~gt~~y-~aPE~~~~~~~~~~~~DiwSlGvil~el~~  196 (299)
T d1ua2a_         143 DFGLAKSFGSPNRAYTH----QVVTRWY-RAPELLFGARMYGVGVDMWAVGCILAELLL  196 (299)
T ss_dssp             CCGGGSTTTSCCCCCCC----SCCCCTT-CCHHHHTTCSCCCHHHHHHHHHHHHHHHHH
T ss_pred             cCccccccCCCcccccc----eecChhh-ccHHHHccCCCCChhhhhhhcchHHHHHHh
Confidence            99999877654321100    0001112 224444333333445567766655555543

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.37  E-value=1.5e-07  Score=89.60  Aligned_cols=133  Identities=12%  Similarity=0.065  Sum_probs=75.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCc----------hhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSST----------HLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLR   70 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~----------~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNIL   70 (444)
                      |||++|+.|.++..............          ......+... ....++..++.+ +..++..|++|+|++|.||+
T Consensus        95 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~i~~qi~~g-l~ylH~~~ivHrDlKp~NIL  172 (301)
T d1lufa_          95 FEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA-EQLCIARQVAAG-MAYLSERKFVHRDLATRNCL  172 (301)
T ss_dssp             EECCTTCBHHHHHHHTCC----------------------CCCCHH-HHHHHHHHHHHH-HHHHHHTTCCCSCCSGGGEE
T ss_pred             EEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHH-HHHHHHHHHHHH-hhhcccCCeEeeEEcccceE
Confidence            78999999999876432110000000          0000011111 123445555444 78899999999999999999


Q ss_pred             EccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           71 YTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        71 v~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      ++.+|.+.+.|||+...+.+.........    ......-++.-+..-+..++..|++.|.--+.+++.
T Consensus       173 ld~~~~~Kl~DFGls~~~~~~~~~~~~~~----~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~  237 (301)
T d1lufa_         173 VGENMVVKIADFGLSRNIYSADYYKADGN----DAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS  237 (301)
T ss_dssp             ECGGGCEEECCCSCHHHHTGGGCBC--------CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred             ECCCCcEEEccchhheeccCCccccccCC----CCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHc
Confidence            99999999999999887766543322111    111112222222233344556788877766666653

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=98.35  E-value=2.8e-07  Score=86.61  Aligned_cols=118  Identities=15%  Similarity=0.141  Sum_probs=74.0

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      ||++.|..+..+.....+++        +.       ....++..++.+ ++.++..|++|+|++|.||+++.||.+.++
T Consensus        79 ~e~~~~~~~~~~~~~~~~l~--------~~-------~~~~i~~qi~~~-L~~LH~~~IvHrDiKp~NIll~~~~~~kl~  142 (286)
T d1ob3a_          79 FEHLDQDLKKLLDVCEGGLE--------SV-------TAKSFLLQLLNG-IAYCHDRRVLHRDLKPQNLLINREGELKIA  142 (286)
T ss_dssp             EECCSEEHHHHHHTSTTCCC--------HH-------HHHHHHHHHHHH-HHHHHHTTCCCSCCCGGGEEECTTSCEEEC
T ss_pred             EEeehhhhHHHHHhhcCCcc--------hh-------hhHHHHHHHHHH-HHHhccCcEEecCCCCceeeEcCCCCEEec
Confidence            57777766555544322222        11       123556666654 899999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||....+.........    .. ........+.+......++..|++++.--+..++.
T Consensus       143 DfG~a~~~~~~~~~~~~----~~-~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~  196 (286)
T d1ob3a_         143 DFGLARAFGIPVRKYTH----EI-VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN  196 (286)
T ss_dssp             CTTHHHHHCC--------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHH
T ss_pred             ccccceecccCccccce----ec-ccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHH
Confidence            99999887654322110    01 11122335555555555666788877666666553

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.34  E-value=2.7e-07  Score=89.11  Aligned_cols=119  Identities=16%  Similarity=0.130  Sum_probs=74.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|..|.+........+        +..       ...++..++.+ ++.++..|++|+|++|.||+++.+|.+.+.
T Consensus       108 ~e~~~~~~L~~~i~~~~~~~--------e~~-------~~~~~~Qi~~a-l~~lH~~~ivHrDiKp~Nill~~~~~vkL~  171 (322)
T d1vzoa_         108 LDYINGGELFTHLSQRERFT--------EHE-------VQIYVGEIVLA-LEHLHKLGIIYRDIKLENILLDSNGHVVLT  171 (322)
T ss_dssp             ECCCCSCBHHHHHHHHSCCC--------HHH-------HHHHHHHHHHH-HHHHHHTTCCCCCCCGGGEEECTTSCEEES
T ss_pred             eecccccHHHHHHHhccccc--------HHH-------HHHHHHHHHHH-HHHhhcCCEEeccCCccceeecCCCCEEEe
Confidence            79999999988876443221        111       22344555544 778999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcC-CCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMD-VVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG-~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||+...++...-......   .....| ...+.+..-. ...+..|++++.--+..++.
T Consensus       172 DFG~a~~~~~~~~~~~~~~---~g~~~~-~~pe~~~~~~~~~~~ksDIWSlG~iLyellt  227 (322)
T d1vzoa_         172 DFGLSKEFVADETERAYDF---CGTIEY-MAPDIVRGGDSGHDKAVDWWSLGVLMYELLT  227 (322)
T ss_dssp             CSSEEEECCGGGGGGGCGG---GSCCTT-CCHHHHTTCC---CTHHHHHHHHHHHHHHHH
T ss_pred             eccchhhhccccccccccc---cccccc-chhHHhhcCCcCCCchhhhHHHHHHHHHHHh
Confidence            9999988765432211110   000111 1133333221 23344688888777776664

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=2.6e-07  Score=88.64  Aligned_cols=120  Identities=13%  Similarity=0.120  Sum_probs=74.6

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+.|..+.+......+       .++.+.       ...++..++.+ +..||..|++|+|++|.||+++.+|.+.+.
T Consensus        89 ~e~~~~~~l~~~~~~~~~-------~~~~~~-------~~~i~~qi~~g-l~yLH~~~iiHrDlKp~NIll~~~~~~kl~  153 (317)
T d1xkka_          89 TQLMPFGCLLDYVREHKD-------NIGSQY-------LLNWCVQIAKG-MNYLEDRRLVHRDLAARNVLVKTPQHVKIT  153 (317)
T ss_dssp             EECCTTCBHHHHHHHTSS-------SCCHHH-------HHHHHHHHHHH-HHHHHHTTCCCSCCCGGGEEEEETTEEEEC
T ss_pred             EEeccCCccccccccccc-------CCCHHH-------HHHHHHHHHHH-HHHHHHcCcccCcchhhcceeCCCCCeEee
Confidence            578888888776554321       112222       23455555544 888999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||+...+.............  ..-.|. ..|.+.. +..++..|++.|.--+.+++.
T Consensus       154 DFGla~~~~~~~~~~~~~~~~--gt~~y~-APE~l~~-~~~~~~sDvwS~Gvil~el~t  208 (317)
T d1xkka_         154 DFGLAKLLGAEEKEYHAEGGK--VPIKWM-ALESILH-RIYTHQSDVWSYGVTVWELMT  208 (317)
T ss_dssp             CCSHHHHTTTTCC----------CCTTTS-CHHHHHH-CCCCHHHHHHHHHHHHHHHHT
T ss_pred             ccccceecccccccccccccc--cCcccc-ChHHHhc-CCCChhhhhhhHHHHHHHHHH
Confidence            999998876644332211110  111221 2444433 344556788888777766653

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=1.5e-07  Score=91.50  Aligned_cols=77  Identities=26%  Similarity=0.320  Sum_probs=58.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEcc---CCcE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTS---SGQI   77 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~---DGrL   77 (444)
                      |||++|+.|.++.....+.      .+++.+       ...++..++.+ +..||..|++|+|++|.||+++.   +|.+
T Consensus        88 mEy~~gg~L~~~i~~~~~~------~l~e~~-------~~~i~~qi~~a-l~ylH~~~iiHRDiKp~NIll~~~~~~~~~  153 (335)
T d2ozaa1          88 MECLDGGELFSRIQDRGDQ------AFTERE-------ASEIMKSIGEA-IQYLHSINIAHRDVKPENLLYTSKRPNAIL  153 (335)
T ss_dssp             EECCCSEEHHHHHHSCSCC------CEEHHH-------HHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEESCSSTTCCE
T ss_pred             EECCCCCcHHHHHHhcCCC------CcCHHH-------HHHHHHHHHHH-HHHHHHcCCccccccccccccccccccccc
Confidence            8999999999987643211      122322       23456666655 88899999999999999999985   5689


Q ss_pred             EEEecccccccchh
Q 013370           78 GFLDFGLLCRMERK   91 (444)
Q Consensus        78 vlLDFGmv~~L~~~   91 (444)
                      .++|||+...+...
T Consensus       154 Kl~DFG~a~~~~~~  167 (335)
T d2ozaa1         154 KLTDFGFAKETTSH  167 (335)
T ss_dssp             EECCCTTCEECCCC
T ss_pred             cccccceeeeccCC
Confidence            99999999877654

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=1e-07  Score=89.76  Aligned_cols=91  Identities=16%  Similarity=0.147  Sum_probs=59.4

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccC-CcEEEEecccccccchhhHHhHHHHHHHHHhCCH-HHHHHHHHh
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS-GQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDW-QSLVHSLTE  117 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~D-GrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~-~~la~~l~~  117 (444)
                      ..++..++++ +..+|..|++|+|++|.||+++.+ |.+.++|||+....+......+.        +.. ....|.+..
T Consensus       113 ~~~~~qi~~a-l~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~~~~~~~--------GT~~y~aPE~~~~  183 (273)
T d1xwsa_         113 RSFFWQVLEA-VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--------GTRVYSPPEWIRY  183 (273)
T ss_dssp             HHHHHHHHHH-HHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCSSCBCCCC--------SCGGGSCHHHHHH
T ss_pred             HHHHHHHHHH-HHHHHHCCCccccCcccceEEecCCCeEEECccccceecccccccccc--------cCCCcCCHHHHcC
Confidence            3556666665 888999999999999999999865 79999999998876654332221        111 112344443


Q ss_pred             cCCCCCCCChHHHHHHHHHHHh
Q 013370          118 MDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus       118 lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      -...+...|++++.--+..++.
T Consensus       184 ~~~~~~~~DiwSlGvilyell~  205 (273)
T d1xwsa_         184 HRYHGRSAAVWSLGILLYDMVC  205 (273)
T ss_dssp             SCBCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCcccccccceeeehhHhh
Confidence            3333334567766665655553

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=1.2e-07  Score=89.54  Aligned_cols=137  Identities=17%  Similarity=0.121  Sum_probs=83.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.+.+......+       .++...       ...++..++.+ +..+|..|++|+|++|.||+++.++++.+.
T Consensus        89 ~e~~~~~~l~~~~~~~~~-------~l~~~~-------~~~~~~qi~~g-l~ylH~~~iiHrDikp~NIll~~~~~vkl~  153 (273)
T d1u46a_          89 TELAPLGSLLDRLRKHQG-------HFLLGT-------LSRYAVQVAEG-MGYLESKRFIHRDLAARNLLLATRDLVKIG  153 (273)
T ss_dssp             EECCTTCBHHHHHHHHGG-------GSCHHH-------HHHHHHHHHHH-HHHHHHTTEECSCCCGGGEEEEETTEEEEC
T ss_pred             eeeecCcchhhhhhcccC-------CCCHHH-------HHHHHHHHHHH-HHHhhhCCEeeeeecHHHhccccccceeec
Confidence            799999998887664421       011121       23455555555 888999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHHH-HHHHHhcCCCCCCCChHHHHHHHHHHHhchhccCCCCcccHHHHHHH
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQSL-VHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGK  158 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~l-a~~l~~lG~l~~~~d~~~~~~~L~~~l~~~~~~~~l~~~~f~~ll~~  158 (444)
                      |||+...+.+.........   .....+.-+ .+.+.. +..++..|+.+|.--+.+++..  ...+....+..+++..
T Consensus       154 DfGl~~~~~~~~~~~~~~~---~~~~~~~~~aPE~~~~-~~~~~~~Di~S~Gvil~emlt~--G~~Pf~~~~~~~~~~~  226 (273)
T d1u46a_         154 DFGLMRALPQNDDHYVMQE---HRKVPFAWCAPESLKT-RTFSHASDTWMFGVTLWEMFTY--GQEPWIGLNGSQILHK  226 (273)
T ss_dssp             CCTTCEECCC-CCEEEC--------CCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHTT--SCCTTTTCCHHHHHHH
T ss_pred             cchhhhhcccCCCcceecC---ccccCcccCCHHHHhC-CCCCcchhhhhhHHHHHHHHhC--CCCCCCCcCHHHHHHH
Confidence            9999998866433221110   000111111 233332 4445557888887777766631  1234445555555443

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=2.7e-07  Score=86.75  Aligned_cols=116  Identities=19%  Similarity=0.201  Sum_probs=70.9

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.|.+++....            ...++. ..+..++..++.+ +..++..|++|+|++|.||+++.+|.+.+.
T Consensus        80 ~ey~~~g~L~~~l~~~~------------~~~l~~-~~~~~i~~~i~~a-l~ylH~~~ivH~dlkp~Nil~~~~~~~kl~  145 (262)
T d1byga_          80 TEYMAKGSLVDYLRSRG------------RSVLGG-DCLLKFSLDVCEA-MEYLEGNNFVHRDLAARNVLVSEDNVAKVS  145 (262)
T ss_dssp             ECCCTTEEHHHHHHHHH------------HHHCCH-HHHHHHHHHHHHH-HHHHHHTTCCCSCCSGGGEEECTTSCEEEC
T ss_pred             EeccCCCCHHHHHHhcC------------CCCCCH-HHHHHHHHHHHhh-ccccccCceeccccchHhheecCCCCEeec
Confidence            79999999999875321            011111 1233555555554 778999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||+....++......       ..-.| ...+.+.. +..++..|+..|.--+.+++.
T Consensus       146 dfg~s~~~~~~~~~~~-------~~~~y-~aPE~l~~-~~~t~~sDIwSfG~il~el~t  195 (262)
T d1byga_         146 DFGLTKEASSTQDTGK-------LPVKW-TAPEALRE-KKFSTKSDVWSFGILLWEIYS  195 (262)
T ss_dssp             CCCC-------------------CCTTT-SCHHHHHH-CCCCHHHHHHHHHHHHHHHHT
T ss_pred             ccccceecCCCCcccc-------ccccC-CChHHHhC-CCCChHHHHHhHHHHHHHHHH
Confidence            9999987765433221       01112 12344443 345566788888777776653

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=2.1e-07  Score=89.05  Aligned_cols=124  Identities=18%  Similarity=0.111  Sum_probs=74.7

Q ss_pred             CCCcCCCCcccHHhhcCCCC--------CCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEc
Q 013370            1 MEWMVGESPTDLISLSTGSS--------VDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYT   72 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~--------~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~   72 (444)
                      |||++|++|.+++.......        ......++..+       ...++..++.+ +..++..|++|+|++|.||+++
T Consensus        90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~qia~g-l~~lH~~~iiHrDlkp~NIL~~  161 (309)
T d1fvra_          90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ-------LLHFAADVARG-MDYLSQKQFIHRDLAARNILVG  161 (309)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHH-------HHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEEC
T ss_pred             EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHH-------HHHHHHHHHHH-HHhhhcCCccccccccceEEEc
Confidence            79999999999875321000        00000111111       23455555555 6789999999999999999999


Q ss_pred             cCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           73 SSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        73 ~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      .++.+.+.|||+..............     ... .....+.+.. +...+..|++.|.--+..++.
T Consensus       162 ~~~~~kl~DfG~a~~~~~~~~~~~~~-----gt~-~y~aPE~l~~-~~~~~~sDvwSfGvil~ell~  221 (309)
T d1fvra_         162 ENYVAKIADFGLSRGQEVYVKKTMGR-----LPV-RWMAIESLNY-SVYTTNSDVWSYGVLLWEIVS  221 (309)
T ss_dssp             GGGCEEECCTTCEESSCEECCC---------CCT-TTCCHHHHHH-CEECHHHHHHHHHHHHHHHHT
T ss_pred             CCCceEEcccccccccccccccccee-----cCC-cccchHHhcc-CCCCccceeehhHHHHHHHHh
Confidence            99999999999987665443221110     001 1122344433 334455677777766666553

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=1.4e-06  Score=83.63  Aligned_cols=114  Identities=16%  Similarity=0.245  Sum_probs=73.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||+.|+.|.++... .+++        +.       ....++..++.+ +..||..|++|+|++|.||+++.+|.+.+.
T Consensus       101 ~~~~~gg~L~~~~~~-~~l~--------e~-------~~~~i~~qil~a-L~~LH~~giiHrDiKp~NILi~~~~~~kl~  163 (348)
T d2gfsa1         101 VTHLMGADLNNIVKC-QKLT--------DD-------HVQFLIYQILRG-LKYIHSADIIHRDLKPSNLAVNEDCELKIL  163 (348)
T ss_dssp             EEECCSEEHHHHHTT-CCCC--------HH-------HHHHHHHHHHHH-HHHHHHTTCCCCCCCGGGEEECTTCCEEEC
T ss_pred             EEeecCCchhhhccc-cccc--------HH-------HHHHHHHHHHHH-HHHHHhCCCcccccCCcccccccccccccc
Confidence            577888888887642 2222        11       233556666655 889999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||................        .....+.+..-...+...|++.+.--+..++.
T Consensus       164 dfg~a~~~~~~~~~~~g~~--------~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~  214 (348)
T d2gfsa1         164 DFGLARHTDDEMTGYVATR--------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT  214 (348)
T ss_dssp             CC----CCTGGGSSSCHHH--------HTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHH
T ss_pred             ccchhcccCcccccccccc--------cccCchhhcCCccCCcccchhhhhHHHHHHHh
Confidence            9999887765543221111        11224444544555667788888766666554

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=98.24  E-value=3.8e-07  Score=87.34  Aligned_cols=72  Identities=19%  Similarity=0.225  Sum_probs=54.5

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCC-cEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG-QIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DG-rLvl   79 (444)
                      |||++|..+.+...   .++        +.       .+..++..++.+ +..||..|++|+|++|.||+++.+| .+.+
T Consensus       111 ~e~~~~~~L~~~~~---~l~--------e~-------~i~~i~~qil~a-L~~LH~~gIvHrDiKp~NILi~~~~~~vkl  171 (328)
T d3bqca1         111 FEHVNNTDFKQLYQ---TLT--------DY-------DIRFYMYEILKA-LDYCHSMGIMHRDVKPHNVMIDHEHRKLRL  171 (328)
T ss_dssp             EECCCSCBGGGTTT---SCC--------HH-------HHHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEEETTTTEEEE
T ss_pred             EeecCCCcHHHHhc---CCC--------HH-------HHHHHHHHHHHH-HHHHhhcccccccccccceEEcCCCCeeee
Confidence            79999988776532   121        11       133566666665 8999999999999999999999765 6899


Q ss_pred             Eecccccccchh
Q 013370           80 LDFGLLCRMERK   91 (444)
Q Consensus        80 LDFGmv~~L~~~   91 (444)
                      +|||+...+.+.
T Consensus       172 ~DFG~a~~~~~~  183 (328)
T d3bqca1         172 IDWGLAEFYHPG  183 (328)
T ss_dssp             CCGGGCEECCTT
T ss_pred             cccccceeccCC
Confidence            999999877654

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=3.2e-07  Score=87.09  Aligned_cols=94  Identities=17%  Similarity=0.175  Sum_probs=60.0

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcC
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMD  119 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG  119 (444)
                      ..++..++.+ ++.+++.|++|+|++|+||+++.+|.+.++|||+..............     ...-.....+.+...+
T Consensus       105 ~~~~~qil~~-L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~~~~-----~gt~~y~apE~~~~~~  178 (298)
T d1gz8a_         105 KSYLFQLLQG-LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE-----VVTLWYRAPEILLGCK  178 (298)
T ss_dssp             HHHHHHHHHH-HHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTTCC-----BCCCTTCCHHHHTTCS
T ss_pred             HHHHHHHHHH-HHHhhcCCEEccccCchheeecccCcceeccCCcceeccCCcccceee-----cccceeeehhhhcccc
Confidence            3556666665 788999999999999999999999999999999987665432111000     0001112234444444


Q ss_pred             CCCCCCChHHHHHHHHHHHh
Q 013370          120 VVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus       120 ~l~~~~d~~~~~~~L~~~l~  139 (444)
                      ..+..+|.+.+..-+..++.
T Consensus       179 ~~~~~~DiwSlGvily~m~~  198 (298)
T d1gz8a_         179 YYSTAVDIWSLGCIFAEMVT  198 (298)
T ss_dssp             SCCTHHHHHHHHHHHHHHHH
T ss_pred             CCCccccccccchhhhHHhh
Confidence            44555666666655555443

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=5.7e-07  Score=86.40  Aligned_cols=77  Identities=18%  Similarity=0.186  Sum_probs=58.7

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      |||++|+.+.++.......       .+...       ...++..++.+ +..++..|++|+|++|.||+++.++.+.+.
T Consensus       108 ~E~~~~g~l~~~~~~~~~~-------~~~~~-------~~~i~~qia~g-L~~lH~~~iiHrDLK~~NILl~~~~~~kL~  172 (311)
T d1r0pa_         108 LPYMKHGDLRNFIRNETHN-------PTVKD-------LIGFGLQVAKG-MKFLASKKFVHRDLAARNCMLDEKFTVKVA  172 (311)
T ss_dssp             EECCTTCBHHHHHHCTTCC-------CBHHH-------HHHHHHHHHHH-HHHHHHTTCCCSCCSGGGEEECTTCCEEEC
T ss_pred             EEEeecCchhhhhcccccc-------chHHH-------HHHHHHHHHHh-hhhhcccCcccCCccHHhEeECCCCCEEEe
Confidence            7999999999987643211       11111       23455556555 677999999999999999999999999999


Q ss_pred             ecccccccchhh
Q 013370           81 DFGLLCRMERKH   92 (444)
Q Consensus        81 DFGmv~~L~~~~   92 (444)
                      |||+...++...
T Consensus       173 DFG~~~~~~~~~  184 (311)
T d1r0pa_         173 DFGLARDMYDKE  184 (311)
T ss_dssp             SSGGGCCTTTTT
T ss_pred             cccchhhccccc
Confidence            999998876543

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=6.4e-07  Score=86.76  Aligned_cols=74  Identities=19%  Similarity=0.316  Sum_probs=57.3

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      ||++.|+.|.++... .+++        +.       .+..++..++.+ ++.||..|++|+|+||+||+++.+|.+.+.
T Consensus        89 ~~~~~~g~L~~~l~~-~~l~--------~~-------~i~~i~~qil~a-l~yLH~~~iiHRDIKp~NILl~~~~~~kl~  151 (345)
T d1pmea_          89 VTHLMGADLYKLLKT-QHLS--------ND-------HICYFLYQILRG-LKYIHSANVLHRDLKPSNLLLNTTCDLKIC  151 (345)
T ss_dssp             EEECCCEEHHHHHHH-CCCC--------HH-------HHHHHHHHHHHH-HHHHHHTTEECCCCCGGGEEECTTCCEEEC
T ss_pred             EEeecCCchhhhhhc-CCCC--------HH-------HHHHHHHHHHHH-HHHHHHCCCcCCCCCcceEEECCCCCEEEc
Confidence            467778888887653 2222        11       233566666665 899999999999999999999999999999


Q ss_pred             ecccccccchh
Q 013370           81 DFGLLCRMERK   91 (444)
Q Consensus        81 DFGmv~~L~~~   91 (444)
                      |||+...+...
T Consensus       152 DfG~a~~~~~~  162 (345)
T d1pmea_         152 DFGLARVADPD  162 (345)
T ss_dssp             CCTTCEECCGG
T ss_pred             ccCceeeccCC
Confidence            99999877654

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=1.2e-06  Score=84.54  Aligned_cols=91  Identities=21%  Similarity=0.292  Sum_probs=65.4

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcC
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMD  119 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG  119 (444)
                      ..++..++.+ +..||..|++|+|++|+||+++.+|.+.+.|||+....+.......       ... +....+.+....
T Consensus       124 ~~~~~qi~~a-L~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~~~~~~-------~t~-~y~aPE~~~~~~  194 (346)
T d1cm8a_         124 QFLVYQMLKG-LRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYV-------VTR-WYRAPEVILNWM  194 (346)
T ss_dssp             HHHHHHHHHH-HHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSCCSSC-------SCG-GGCCTHHHHTTT
T ss_pred             HHHHHHHHHH-HHHHHhCCCcccccCcchhhcccccccccccccceeccCCcccccc-------ccc-cccCHHHHcCCC
Confidence            4566666666 7889999999999999999999999999999999998876432110       011 112345555555


Q ss_pred             CCCCCCChHHHHHHHHHHHh
Q 013370          120 VVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus       120 ~l~~~~d~~~~~~~L~~~l~  139 (444)
                      ..+...|++.+.--+..++.
T Consensus       195 ~~~~~~DiwSlGvil~ell~  214 (346)
T d1cm8a_         195 RYTQTVDIWSVGCIMAEMIT  214 (346)
T ss_dssp             CCCTTHHHHHHHHHHHHHHH
T ss_pred             CCCccchhhcchHHHHHHHH
Confidence            56677888888766666654

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=4.2e-07  Score=88.25  Aligned_cols=51  Identities=24%  Similarity=0.277  Sum_probs=42.8

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCC-cEEEEecccccccchh
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG-QIGFLDFGLLCRMERK   91 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DG-rLvlLDFGmv~~L~~~   91 (444)
                      ..++..++.+ +..||..|++|+|++|.||+++.+| .+.+.|||+...+...
T Consensus       125 ~~i~~qil~a-L~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~  176 (350)
T d1q5ka_         125 KLYMYQLFRS-LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG  176 (350)
T ss_dssp             HHHHHHHHHH-HHHHHTTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTT
T ss_pred             HHHHHHHHHH-HHHHHhcCCcccCCCcceEEEecCCCceeEecccchhhccCC
Confidence            3456666655 8889999999999999999999886 7889999999887654

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=1.4e-06  Score=82.07  Aligned_cols=76  Identities=28%  Similarity=0.325  Sum_probs=55.4

Q ss_pred             CCCcCCCCcccHHhhcC-CCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEE
Q 013370            1 MEWMVGESPTDLISLST-GSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGF   79 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~-G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvl   79 (444)
                      |||++|..+........ +.+        .+       ....++..++.+ +..||..|++|+|.+|.||+++.+|.+.+
T Consensus        94 ~e~~~~~~~~~~~~~~~~~~~--------~~-------~~~~~~~qi~~a-L~yLH~~~ivHrDiKp~NILi~~~~~~kl  157 (305)
T d1blxa_          94 FEHVDQDLTTYLDKVPEPGVP--------TE-------TIKDMMFQLLRG-LDFLHSHRVVHRDLKPQNILVTSSGQIKL  157 (305)
T ss_dssp             EECCSCBHHHHHHHSCTTCSC--------HH-------HHHHHHHHHHHH-HHHHHHTTCCCCCCCGGGEEECTTCCEEE
T ss_pred             EEeccCCchhhhhhccCCCCC--------HH-------HHHHHHHHHHHH-HHHHHhCCEEecCCCccEEEEcCCCCeee
Confidence            68898877665443322 221        11       123455555554 78899999999999999999999999999


Q ss_pred             Eecccccccchhh
Q 013370           80 LDFGLLCRMERKH   92 (444)
Q Consensus        80 LDFGmv~~L~~~~   92 (444)
                      .|||+........
T Consensus       158 ~dfg~~~~~~~~~  170 (305)
T d1blxa_         158 ADFGLARIYSFQM  170 (305)
T ss_dssp             CSCCSCCCCCGGG
T ss_pred             cchhhhhhhcccc
Confidence            9999987765543

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.09  E-value=1e-06  Score=82.25  Aligned_cols=118  Identities=14%  Similarity=0.119  Sum_probs=74.8

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEE
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL   80 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlL   80 (444)
                      ||++.|..+..+.......+        ..       ....++..++++ ++.++..|++|+|++|+||+++.++.+.++
T Consensus        80 ~~~~~~~~l~~~~~~~~~~~--------~~-------~~~~~~~q~~~a-L~~lH~~~IvHrDiKP~NIli~~~~~~kl~  143 (292)
T d1unla_          80 FEFCDQDLKKYFDSCNGDLD--------PE-------IVKSFLFQLLKG-LGFCHSRNVLHRDLKPQNLLINRNGELKLA  143 (292)
T ss_dssp             EECCSEEHHHHHHHTTTCCC--------HH-------HHHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEECTTCCEEEC
T ss_pred             eeeccccccccccccccccc--------hh-------HHHHHHHHHHHH-HHHhhcCCEeeecccCcccccccCCceeee
Confidence            57777877776654332221        11       123556666654 889999999999999999999999999999


Q ss_pred             ecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           81 DFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        81 DFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      |||.....+.........     ....+....+.+......++..|++.+.--+..++.
T Consensus       144 DFG~a~~~~~~~~~~~~~-----~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~  197 (292)
T d1unla_         144 NFGLARAFGIPVRCYSAE-----VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELAN  197 (292)
T ss_dssp             CCTTCEECCSCCSCCCSC-----CSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTT
T ss_pred             ecchhhcccCCCccceee-----ccccchhhhhHhccCCCCCchhhccccchHHHHHhh
Confidence            999998876543211100     011222233444444445556677777666655543

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.08  E-value=1.1e-06  Score=82.83  Aligned_cols=50  Identities=20%  Similarity=0.344  Sum_probs=41.4

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEcc---CCcEEEEecccccccch
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTS---SGQIGFLDFGLLCRMER   90 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~---DGrLvlLDFGmv~~L~~   90 (444)
                      ..++..++.+ ++.+|..|++|+|++|.||++..   ++.+.++|||+...+..
T Consensus       106 ~~~~~qi~~~-l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~  158 (299)
T d1ckia_         106 LLLADQMISR-IEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD  158 (299)
T ss_dssp             HHHHHHHHHH-HHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBC
T ss_pred             HHHHHHHHHH-HHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceeccc
Confidence            3566666666 88999999999999999999874   45799999999987754

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=98.05  E-value=1.5e-06  Score=82.32  Aligned_cols=74  Identities=18%  Similarity=0.270  Sum_probs=53.1

Q ss_pred             CCCcCCCCcccHHhhcCCCCCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEcc-----CC
Q 013370            1 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTS-----SG   75 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~-----DG   75 (444)
                      |||+ |..+.+......+.       ++..       ....++..++.+ +..+|..|++|+|.+|.||+++.     +|
T Consensus        80 me~~-~~~l~~~~~~~~~~-------~~~~-------~~~~i~~q~~~~-l~~lH~~giiHrDiKp~Nili~~~~~~~~~  143 (293)
T d1csna_          80 IDLL-GPSLEDLLDLCGRK-------FSVK-------TVAMAAKQMLAR-VQSIHEKSLVYRDIKPDNFLIGRPNSKNAN  143 (293)
T ss_dssp             EECC-CCBHHHHHHHTTTC-------CCHH-------HHHHHHHHHHHH-HHHHHTTTEECCCCCGGGEEECCSSSTTTT
T ss_pred             EEec-CCCHHHHHHhhccc-------hhhH-------HHHHHHHHHHHH-HHHHHHCCceeccCCccceeecCcccccCC
Confidence            7888 56777766543211       1111       123455555554 88999999999999999999974     68


Q ss_pred             cEEEEecccccccch
Q 013370           76 QIGFLDFGLLCRMER   90 (444)
Q Consensus        76 rLvlLDFGmv~~L~~   90 (444)
                      ++.++|||+...+..
T Consensus       144 ~vkl~DFG~a~~~~~  158 (293)
T d1csna_         144 MIYVVDFGMVKFYRD  158 (293)
T ss_dssp             CEEECCCTTCEESBC
T ss_pred             ceEEcccceeEEccc
Confidence            999999999987654

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=9.8e-07  Score=83.88  Aligned_cols=97  Identities=15%  Similarity=0.105  Sum_probs=58.9

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcC
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMD  119 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG  119 (444)
                      +.++..++.+ +..++..|++|+|++|.||+++++|.+.+.|||+...++..................| ...+.+....
T Consensus       120 ~~i~~qil~~-l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y-~aPE~~~~~~  197 (318)
T d3blha1         120 KRVMQMLLNG-LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWY-RPPELLLGER  197 (318)
T ss_dssp             HHHHHHHHHH-HHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCC-----CCCCCSCCSCGGG-CCHHHHTTCS
T ss_pred             HHHHHHHHHH-HHHhccCCEEecCcCchheeecCCCcEEeeecceeeecccccccccccccceecCHHH-hhHHHHcCCC
Confidence            3455555555 8889999999999999999999999999999999987765432211000000001111 2244443332


Q ss_pred             CCCCCCChHHHHHHHHHHH
Q 013370          120 VVRPGTNTLRVTMDLEDAL  138 (444)
Q Consensus       120 ~l~~~~d~~~~~~~L~~~l  138 (444)
                      ..++..|++.+.--+..++
T Consensus       198 ~~~~k~DiwSlGvil~el~  216 (318)
T d3blha1         198 DYGPPIDLWGAGCIMAEMW  216 (318)
T ss_dssp             SCCTHHHHHHHHHHHHHHH
T ss_pred             CCCcHHHcccCCceeeeHh
Confidence            3344567777665555554

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=2.4e-06  Score=81.48  Aligned_cols=132  Identities=14%  Similarity=0.114  Sum_probs=77.4

Q ss_pred             CCCcCCCCcccHHhhcCCCC-CCCC---CchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCc
Q 013370            1 MEWMVGESPTDLISLSTGSS-VDGS---STHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQ   76 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G~~-~~~i---~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGr   76 (444)
                      |||++|+.+.++........ ....   ........++. .....++..++.+ ++.||..|++|+|++|.||+++.+|.
T Consensus       106 mE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~qi~~g-l~~LH~~~ivHrDLKp~NIl~~~~~~  183 (311)
T d1t46a_         106 TEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL-EDLLSFSYQVAKG-MAFLASKNCIHRDLAARNILLTHGRI  183 (311)
T ss_dssp             EECCTTEEHHHHHHHTTTTC--------------CCCCH-HHHHHHHHHHHHH-HHHHHHTTCCCSCCSGGGEEEETTTE
T ss_pred             EEcCCCCCHHHHHHhccccccccccccccccccccCCCH-HHHHHHHHHHHHH-HHHHHhCCeeecccccccccccccCc
Confidence            79999999999876532100 0000   00000111211 1233556555555 88999999999999999999999999


Q ss_pred             EEEEecccccccchhhHHhHHHHHHHHHhCCHHHH-HHHHHhcCCCCCCCChHHHHHHHHHHHh
Q 013370           77 IGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSL-VHSLTEMDVVRPGTNTLRVTMDLEDALG  139 (444)
Q Consensus        77 LvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~l-a~~l~~lG~l~~~~d~~~~~~~L~~~l~  139 (444)
                      +.+.|||....+...........    ..+...-+ .+.+. -+..++..|+++|.--+..++.
T Consensus       184 ~ki~DfG~~~~~~~~~~~~~~~~----~~gt~~y~aPE~~~-~~~~~~~~DIwS~G~~l~ellt  242 (311)
T d1t46a_         184 TKICDFGLARDIKNDSNYVVKGN----ARLPVKWMAPESIF-NCVYTFESDVWSYGIFLWELFS  242 (311)
T ss_dssp             EEECCCGGGSCTTSCTTSEECSS----SEECGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHT
T ss_pred             ccccccchheeccCCCcceEeee----cccChHHcCHHHhc-CCCCCCcccccchHHHHHHHHh
Confidence            99999999987765433211100    00111111 23333 3455556777777766666653

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=1.7e-06  Score=82.61  Aligned_cols=83  Identities=12%  Similarity=0.103  Sum_probs=57.3

Q ss_pred             CCCcCCCCcccHHhhcCC-C-CCCCCCchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEE
Q 013370            1 MEWMVGESPTDLISLSTG-S-SVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIG   78 (444)
Q Consensus         1 MEwIdG~kLtd~~~~~~G-~-~~~~i~~~~~~~~~d~~~~l~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLv   78 (444)
                      |||++|+.+.++.....+ . .......++..       .+..++..++++ +..++..|++|+|++|.||+++.++++.
T Consensus       102 ~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~-------~~~~i~~~ia~g-l~~LH~~~ivHrDlk~~NiLld~~~~~K  173 (308)
T d1p4oa_         102 MELMTRGDLKSYLRSLRPAMANNPVLAPPSLS-------KMIQMAGEIADG-MAYLNANKFVHRDLAARNCMVAEDFTVK  173 (308)
T ss_dssp             EECCTTCBHHHHHHHHHHHHHHCTTCCCCCHH-------HHHHHHHHHHHH-HHHHHHTTCBCSCCSGGGEEECTTCCEE
T ss_pred             EeecCCCCHHHHHHhcccccccccccCCCCHH-------HHHHHHHHHHHH-HHHHhhCCeeeceEcCCceeecCCceEE
Confidence            799999999988654310 0 00000011111       123455555444 8889999999999999999999999999


Q ss_pred             EEecccccccchh
Q 013370           79 FLDFGLLCRMERK   91 (444)
Q Consensus        79 lLDFGmv~~L~~~   91 (444)
                      +.|||+...+...
T Consensus       174 l~DFGla~~~~~~  186 (308)
T d1p4oa_         174 IGDFGMTRDIYET  186 (308)
T ss_dssp             ECCTTCCCGGGGG
T ss_pred             EeecccceeccCC
Confidence            9999998777554

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=7.3e-06  Score=79.41  Aligned_cols=91  Identities=19%  Similarity=0.268  Sum_probs=52.3

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccCCCCCCeEEccCCcEEEEecccccccchhhHHhHHHHHHHHHhCCHHHHHHHHHhcC
Q 013370           40 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMD  119 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~R~~l~~ll~alv~~D~~~la~~l~~lG  119 (444)
                      ..++..++.+ +..|+..|++|+|++|.||+++.+|.+.+.|||+....+...+....     .-...| ...+.+....
T Consensus       122 ~~~~~qil~g-l~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~~~~~~-----~~t~~y-~aPE~l~~~~  194 (355)
T d2b1pa1         122 SYLLYQMLCG-IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY-----VVTRYY-RAPEVILGMG  194 (355)
T ss_dssp             HHHHHHHHHH-HHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC--------------------CCTT-CCHHHHTTCC
T ss_pred             HHHHHHHHHH-HHHhhhcccccccCCccccccccccceeeechhhhhccccccccccc-----cccccc-cChhhhcCCC
Confidence            3555555554 88899999999999999999999999999999998877665433211     111222 2244444332


Q ss_pred             CCCCCCChHHHHHHHHHHH
Q 013370          120 VVRPGTNTLRVTMDLEDAL  138 (444)
Q Consensus       120 ~l~~~~d~~~~~~~L~~~l  138 (444)
                       ..+..|++.+.--+..++
T Consensus       195 -~~~~~DiwSlG~~l~ell  212 (355)
T d2b1pa1         195 -YKENVDIWSVGCIMGEMV  212 (355)
T ss_dssp             -CCTTHHHHHHHHHHHHHH
T ss_pred             -CCCCcccccccchHHHHh
Confidence             234456666654444444

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=97.25  E-value=0.00012  Score=66.11  Aligned_cols=35  Identities=23%  Similarity=0.276  Sum_probs=29.7

Q ss_pred             CccccCCCCCCeEEccCCcEEEEecccccccchhh
Q 013370           58 GILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKH   92 (444)
Q Consensus        58 GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~   92 (444)
                      +++|+|.|||||++++++..++|||+.++.=++..
T Consensus       184 ~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~g~~~~  218 (263)
T d1j7la_         184 VFSHGDLGDSNIFVKDGKVSGFIDLGRSGRADKWY  218 (263)
T ss_dssp             EEECSCCCTTSEEEETTEEEEECCCTTCEEEEHHH
T ss_pred             EEEEeeccCcceeecCCceEEEeechhcccCCHHH
Confidence            58999999999999876666899999998766543

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=97.13  E-value=0.00013  Score=65.75  Aligned_cols=35  Identities=26%  Similarity=0.334  Sum_probs=29.8

Q ss_pred             CccccCCCCCCeEEccCCcEEEEecccccccchhh
Q 013370           58 GILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKH   92 (444)
Q Consensus        58 GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~   92 (444)
                      +++|+|+|||||++++++..++|||+.++.=++..
T Consensus       176 ~liHgD~~~~Nvl~~~~~~~~iID~~~~~~g~~~~  210 (255)
T d1nd4a_         176 VVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQ  210 (255)
T ss_dssp             EEECSSCCGGGEEEETTEEEEECCCTTCEEEETHH
T ss_pred             eEEeCCCCCcceEEeCCceEEEEEchhcccCCHHH
Confidence            48999999999999987667899999998766643

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.98  E-value=0.00021  Score=68.05  Aligned_cols=51  Identities=24%  Similarity=0.367  Sum_probs=39.9

Q ss_pred             HHHHHHHHHHHHHHHHH-cCccccCCCCCCeEEccCC------cEEEEecccccccchh
Q 013370           40 LDLVNKGVEATLVQLLE-TGILHADPHPGNLRYTSSG------QIGFLDFGLLCRMERK   91 (444)
Q Consensus        40 ~~La~~gv~a~L~QLl~-~GfFHADPHPGNILv~~DG------rLvlLDFGmv~~L~~~   91 (444)
                      +.++..++.+ +..++. .|++|+|++|.||+++.+|      .+.++|||........
T Consensus       128 ~~i~~qil~a-l~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~~  185 (362)
T d1q8ya_         128 KQISKQLLLG-LDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH  185 (362)
T ss_dssp             HHHHHHHHHH-HHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBC
T ss_pred             HHHHHHHHHH-HHHHhhhcCcccccCChhHeeeeccCcccccceeeEeecccccccccc
Confidence            3445555544 777786 9999999999999998765      4999999998776553

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.87  E-value=9.8e-05  Score=69.29  Aligned_cols=34  Identities=29%  Similarity=0.577  Sum_probs=30.2

Q ss_pred             HHcCccccCCCCCCeEEccCCcEEEEeccccccc
Q 013370           55 LETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM   88 (444)
Q Consensus        55 l~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L   88 (444)
                      +..|++|+|+||+|++++.++..++||||.++.=
T Consensus       181 L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~~~  214 (316)
T d2ppqa1         181 LPAGVIHADLFQDNVFFLGDELSGLIDFYFACND  214 (316)
T ss_dssp             SCEEEECSCCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred             cccccccCCcchhhhhcccccceeEecccccccc
Confidence            4579999999999999998877899999999854

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=96.44  E-value=0.00029  Score=67.01  Aligned_cols=32  Identities=28%  Similarity=0.334  Sum_probs=26.2

Q ss_pred             HcCccccCCCCCCeEEccCCcEEEEecccccccc
Q 013370           56 ETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME   89 (444)
Q Consensus        56 ~~GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~   89 (444)
                      ..|++|+|+|||||+++ +| ..+|||+-++.=+
T Consensus       191 p~~liHgDlh~~NvL~~-~~-~~~IDFdd~~~g~  222 (325)
T d1zyla1         191 TVLRLHGDCHAGNILWR-DG-PMFVDLDDARNGP  222 (325)
T ss_dssp             CCEECCSSCSGGGEEES-SS-EEECCCTTCCEEC
T ss_pred             CceeecCCCCcccEEEe-CC-ceEEechhcccCc
Confidence            46899999999999996 44 4589999998643

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=95.58  E-value=0.0018  Score=63.11  Aligned_cols=34  Identities=15%  Similarity=0.169  Sum_probs=28.4

Q ss_pred             CccccCCCCCCeEEccCCcEEEEecccccccchhh
Q 013370           58 GILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKH   92 (444)
Q Consensus        58 GfFHADPHPGNILv~~DGrLvlLDFGmv~~L~~~~   92 (444)
                      .+.|+|+||||||+++++ +.+|||-++..=++..
T Consensus       224 ~LiHGDl~~gNIlv~~~~-~~vID~E~a~~G~~~~  257 (392)
T d2pula1         224 TLIHGDLHTGSIFASEHE-TKVIDPEFAFYGPIGF  257 (392)
T ss_dssp             EEECSCCCGGGEEECSSC-EEECCCTTCEEECTHH
T ss_pred             ceeccCCcCCceeEcCCc-eEEechhhcccCCHHH
Confidence            699999999999998765 8999998776666543

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=86.06  E-value=0.092  Score=50.25  Aligned_cols=33  Identities=21%  Similarity=0.314  Sum_probs=25.4

Q ss_pred             CccccCCCCCCeEEcc----------------------------CCcEEEEecccccccch
Q 013370           58 GILHADPHPGNLRYTS----------------------------SGQIGFLDFGLLCRMER   90 (444)
Q Consensus        58 GfFHADPHPGNILv~~----------------------------DGrLvlLDFGmv~~L~~   90 (444)
                      .|.|.|++||||++.+                            ++++.+|||=..+.=++
T Consensus       219 v~CHnDL~~~NiL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lID~EYa~~n~~  279 (395)
T d1nw1a_         219 TFCHNDLQEGNILLPKASSGNIRMPSLSDETQALGNSLSAFNPADPRLVLIDFEYASYNYR  279 (395)
T ss_dssp             EEECSCCCGGGEEEEC------------------------------CCEECCCTTCEEEEH
T ss_pred             eEEecCCCcccEeeccccccccccccccccccccccccccccCCCCcEEEEeecccCCCcc
Confidence            3679999999999854                            46899999977766554